Miyakogusa Predicted Gene
- Lj0g3v0264369.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0264369.1 Non Chatacterized Hit- tr|I1N6M9|I1N6M9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6621
PE=,81.88,0,TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT DELTA,NULL;
TRANSLATION INITIATION FACTOR EIF-2B,Initia,CUFF.17443.1
(602 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G38640.1 | Symbols: | NagB/RpiA/CoA transferase-like superfa... 647 0.0
AT1G48970.1 | Symbols: | NagB/RpiA/CoA transferase-like superfa... 535 e-152
AT2G44070.1 | Symbols: | NagB/RpiA/CoA transferase-like superfa... 447 e-126
AT1G72340.1 | Symbols: | NagB/RpiA/CoA transferase-like superfa... 74 4e-13
AT1G53900.1 | Symbols: | Eukaryotic translation initiation fact... 66 6e-11
AT1G53880.1 | Symbols: | Eukaryotic translation initiation fact... 66 6e-11
AT3G07300.2 | Symbols: | NagB/RpiA/CoA transferase-like superfa... 57 3e-08
AT3G07300.1 | Symbols: | NagB/RpiA/CoA transferase-like superfa... 57 3e-08
AT3G07300.3 | Symbols: | NagB/RpiA/CoA transferase-like superfa... 53 6e-07
>AT5G38640.1 | Symbols: | NagB/RpiA/CoA transferase-like
superfamily protein | chr5:15468020-15470674 REVERSE
LENGTH=642
Length = 642
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/622 (59%), Positives = 418/622 (67%), Gaps = 43/622 (6%)
Query: 4 SRRAPRAAIDPVPKIRQVGFFA---PGAAP----PERXXXXXXXXXXXXXXVVGASPSLS 56
SRR PRA +DP K+RQVGFF P ++ P+ G S LS
Sbjct: 3 SRRNPRAVVDP--KVRQVGFFTSSQPDSSTQQQQPDPIAATSASSSSSTISPSGNS--LS 58
Query: 57 PVMIPPPR-HLSDNLILHARPVAASQLRXXXXXXXXXXXXXXXXXXXXXN-GSFFDGRGS 114
PVMIPPPR + SD L A+ + G G
Sbjct: 59 PVMIPPPRLNSSDTFPLRVAVAGAAASAVSPSSFSYSSRRDFPDGSTTASPGRHSRGSFV 118
Query: 115 GAGKVVASSFPRGGFDLTAVVK---VPASELTTVSVVNDSLGLPEKEKANKGGGSAVEVK 171
+ VASS P G D A K VPAS LTTVSVV GL EK S +EV+
Sbjct: 119 KSSVPVASSLPGIGMDSMAAAKSSSVPASGLTTVSVVTMPPGLSEK-------ASGMEVQ 171
Query: 172 DQPANSKQQKP---KPSXXXXXXXXXXXXXXXXXXXXXGNKASGTTTVMN-------AKP 221
S Q+KP K + G K + ++ AKP
Sbjct: 172 -----SDQKKPLKEKTTKAERRAIQEAQRAAKAAAKADGGKVAPVSSASVASTSVKAAKP 226
Query: 222 AKAVKSAQKVD-NVTVAASEKKGTDCPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQ 280
AKA ++QK D V A+EKKG P EKDRKKDAP PRMQYDD+SRV KAKRRAVVKQ
Sbjct: 227 AKA--TSQKNDVAVATGAAEKKGG--PSEKDRKKDAPHPRMQYDDESRVVKAKRRAVVKQ 282
Query: 281 TEAKNRVELFRHLPQYEHGSQLPDLEAKFFHLYSVHPAVYKVGLQYLLGDISGGNARCIA 340
TEAKNRVELFRHLPQYEHG+QLPDLE KFF L +HPAVYKVGLQYL GDISGGNARCIA
Sbjct: 283 TEAKNRVELFRHLPQYEHGTQLPDLETKFFQLDPMHPAVYKVGLQYLSGDISGGNARCIA 342
Query: 341 MLQAFQEAIKDYLVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRYLKSRIAKLP 400
MLQAFQE +KDY PPEK+L RD+TAKISSYVSFLIECRPLSISMGNAIR++K+RIAKLP
Sbjct: 343 MLQAFQEVVKDYSTPPEKSLNRDMTAKISSYVSFLIECRPLSISMGNAIRFVKNRIAKLP 402
Query: 401 LTVSESEAKTSLQSDIERFISEKIILANKVIVKLAVTKIRDGDVLLTYGSSSAIEMILLH 460
+T+SESEAK +LQSDIERFI+EKII+A+ VIVK AVTKIRDGDVLLTYGS +A+EM++LH
Sbjct: 403 ITLSESEAKATLQSDIERFINEKIIVADTVIVKHAVTKIRDGDVLLTYGSPTAVEMVILH 462
Query: 461 AHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLGASSV 520
AHEL K+FRV+VVDSRP +CTYTHINA+SYIMHEVT+VFLGASSV
Sbjct: 463 AHELRKKFRVLVVDSRPKLEGQLLLRRLIKRGINCTYTHINAISYIMHEVTKVFLGASSV 522
Query: 521 LSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIISNVLG 580
LSNGTVYSRVGTACVAMVA+AFRVPV+VCCEAYKFHERVQLDSICSNELGDP+ IS V G
Sbjct: 523 LSNGTVYSRVGTACVAMVANAFRVPVLVCCEAYKFHERVQLDSICSNELGDPNAISEVHG 582
Query: 581 REDVNYLDGWADIENLQLLNLM 602
RED+NYLDG + NLQ LNLM
Sbjct: 583 REDINYLDGLTNNANLQFLNLM 604
>AT1G48970.1 | Symbols: | NagB/RpiA/CoA transferase-like
superfamily protein | chr1:18113868-18117547 REVERSE
LENGTH=666
Length = 666
Score = 535 bits (1377), Expect = e-152, Method: Compositional matrix adjust.
Identities = 305/623 (48%), Positives = 374/623 (60%), Gaps = 39/623 (6%)
Query: 15 VPKIRQVGFFAPGAAPPERXXXXXXXXXXXXXXVVGASPS---------LSPVMIPPPRH 65
VPK+R+VGFF PPE +S +SPV+IPP RH
Sbjct: 10 VPKVRRVGFFTSIEPPPESSLQRPNRSQSGPVDATTSSSPLSDSPSGNLISPVLIPPSRH 69
Query: 66 LSDNLILHA----------------RPVAASQLRXXXXXXXXXXXXXXXXXXXXXNG--- 106
SDNL R + NG
Sbjct: 70 HSDNLTSRVAAAAAAPVPVPGPAAFRRYLTPERTLLHVGSYNPPDSLLGTSSPSSNGGLS 129
Query: 107 ----SFFDGRGSGAGKVVASSFPRGGFDLTAVVKVPASELTTVSVVNDSLGLPEKEKANK 162
S F + S + K+ AS P GGFDLT V+ P T ++ + S G K+K +
Sbjct: 130 EDSASLFGFQRSDSTKLSAS-LPNGGFDLTLAVRAPQESETKIATTSASQG---KKKIAE 185
Query: 163 GGGSAVEVKDQPANSKQQKP-KPSXXXXXXXXXXXXXXXXXXXXXGNKASGTTTVMNAKP 221
G + +P K+ K K G + A P
Sbjct: 186 VSGKSESATTKPQKEKEPKALKDKTTKAERRAIQEAQRAAKAAAKGEGSRRADESGRANP 245
Query: 222 AKA-VKSAQKVDNVTVAASEKKGTDCPPEKDRKKDAPQPRMQYDDKSRVEKAKRRAVVKQ 280
KA +K K + + V +S + T EK+++ D PQ +MQYDDKSRV+KAKRRAVV+Q
Sbjct: 246 GKAAIKPQPKKERLPVTSSVSEKTAVAVEKEKRMDVPQTQMQYDDKSRVDKAKRRAVVEQ 305
Query: 281 TEAKNRVELFRHLPQYEHGSQLPDLEAKFFHLYSVHPAVYKVGLQYLLGDISGGNARCIA 340
TE+KN+VELF HLPQYE +QLP+L + FF L S+H AVYKVGLQ+L GDISG NARCIA
Sbjct: 306 TESKNKVELFLHLPQYERSNQLPNLSSNFFTLDSIHHAVYKVGLQHLAGDISGDNARCIA 365
Query: 341 MLQAFQEAIKDYLVPPEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRYLKSRIAKLP 400
MLQAFQEAI+DY PP K L DLTAKI+ YVSFLIECRPLS+SMGNAIR+LK++I KLP
Sbjct: 366 MLQAFQEAIEDYSTPPMKDLTMDLTAKINGYVSFLIECRPLSMSMGNAIRFLKNQIRKLP 425
Query: 401 LTVSESEAKTSLQSDIERFISEKIILANKVIVKLAVTKIRDGDVLLTYGSSSAIEMILLH 460
+ +SESEAK+SL SDI RFI EK I+A+K IV+ AVTKIRDG+VLLTYG S +EMILL+
Sbjct: 426 VNLSESEAKSSLCSDIGRFIDEKTIIADKAIVQHAVTKIRDGEVLLTYGFSCVVEMILLY 485
Query: 461 AHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLGASSV 520
AHE+GK+FRVV+VDSRP CTYTHINA+SYIM E TRVFLGASS+
Sbjct: 486 AHEIGKKFRVVIVDSRPNLEGQKLLRRLVTRGLDCTYTHINAISYIMREATRVFLGASSI 545
Query: 521 LSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGDPDIISNVLG 580
SNGT+Y+RVGT+C+AMVA+AF VPVIVCCEAYKFHERV LDSICSNELGDPD ++N+
Sbjct: 546 YSNGTLYARVGTSCIAMVANAFSVPVIVCCEAYKFHERVLLDSICSNELGDPDAVANIPS 605
Query: 581 -REDVNYLDGWADIENLQLLNLM 602
R + + + +NLQ LNLM
Sbjct: 606 FRTNAKHSKTMDNNKNLQFLNLM 628
>AT2G44070.1 | Symbols: | NagB/RpiA/CoA transferase-like
superfamily protein | chr2:18231097-18232469 REVERSE
LENGTH=333
Length = 333
Score = 447 bits (1150), Expect = e-126, Method: Compositional matrix adjust.
Identities = 218/289 (75%), Positives = 245/289 (84%), Gaps = 1/289 (0%)
Query: 315 VHPAVYKVGLQYLLGDISGGNARCIAMLQAFQEAIKDYLVPPEKTLVRDLTAKISSYVSF 374
+H AVYKVGL YL DISGGNARCIAMLQAFQE +KDY PPE TL RD+TA+ISSYVSF
Sbjct: 1 MHSAVYKVGLHYLSWDISGGNARCIAMLQAFQEVVKDYSTPPENTLNRDMTAQISSYVSF 60
Query: 375 LIECRPLSISMGNAIRYLKSRIAKLPLTVSESEAKTSLQSDIERFISEKIILANKVIVKL 434
LIECRPLSISMGNAIR++K+RIAKLP+T+SESEAK SL SDIERFI+EKII A+ VIV+
Sbjct: 61 LIECRPLSISMGNAIRFVKNRIAKLPITLSESEAKASLHSDIERFINEKIIGADTVIVEH 120
Query: 435 AVTKIRDGDVLLTYGSSSAIEMILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXS 494
AVTKIRDGDVLLTYGSS+ IEMIL+HAHELGK+FRV VVDSRP +
Sbjct: 121 AVTKIRDGDVLLTYGSSTVIEMILVHAHELGKKFRVFVVDSRPKLQGKLLLRRLIKRGIN 180
Query: 495 CTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIVCCEAYK 554
CTYTHI A+SYIMH+VT+VFLGASSV SNGTVYSRVGTACVAMVA+AFRVPV+VCCEAYK
Sbjct: 181 CTYTHITAISYIMHQVTKVFLGASSVFSNGTVYSRVGTACVAMVANAFRVPVLVCCEAYK 240
Query: 555 FHERVQLD-SICSNELGDPDIISNVLGREDVNYLDGWADIENLQLLNLM 602
FHE+VQLD SICSNELGDP+ IS V GRED+NYL+G + L+ LNLM
Sbjct: 241 FHEKVQLDYSICSNELGDPNAISKVHGREDINYLNGLTNNAKLKFLNLM 289
>AT1G72340.1 | Symbols: | NagB/RpiA/CoA transferase-like
superfamily protein | chr1:27236898-27238482 FORWARD
LENGTH=382
Length = 382
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Query: 408 AKTSLQSDIERFISEKIILANKVIVKLAVTKIRDGDVLLTYGSSSAIEMILLHAHELGKQ 467
AK+ L E+F E A ++I L+ I DG +L +G S + IL A + K
Sbjct: 169 AKSRLLERAEKF-GEISCKARRIIAMLSQDFIFDGCTILVHGLSRVVLEILKTAAQNNKL 227
Query: 468 FRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVY 527
FRV+ + RP +AV+Y M EV VF+GA V+ +G +
Sbjct: 228 FRVLCTEGRPDGTGVLLSSELSKLDIPVKLLLDSAVAYSMDEVDMVFVGADGVVESGGII 287
Query: 528 SRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLD 562
+ +GT +A+VAH+ PV V E+YKF LD
Sbjct: 288 NMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLD 322
>AT1G53900.1 | Symbols: | Eukaryotic translation initiation factor
2B (eIF-2B) family protein | chr1:20127634-20130834
FORWARD LENGTH=580
Length = 580
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%)
Query: 427 ANKVIVKLAVTKIRDGDVLLTYGSSSAIEMILLHAHELGKQFRVVVVDSRPXXXXXXXXX 486
A +I L+ I DG +L +G S + IL + + K FRV+ + RP
Sbjct: 385 ARTIIAMLSQDFIFDGCTILVHGFSRVVFEILKTSAQNKKLFRVLCTEGRPDKTGVLLAN 444
Query: 487 XXXXXXXSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPV 546
+AV+Y M EV VF+GA V+ +G + + +GT +A+VA + PV
Sbjct: 445 ELAKLDIPVKLLIDSAVAYSMDEVDMVFVGADGVVESGGIINMMGTYQIALVAQSMNKPV 504
Query: 547 IVCCEAYKFHERVQLD 562
V E+YKF LD
Sbjct: 505 YVAAESYKFARLYPLD 520
>AT1G53880.1 | Symbols: | Eukaryotic translation initiation factor
2B (eIF-2B) family protein | chr1:20115069-20118269
FORWARD LENGTH=580
Length = 580
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 64/136 (47%)
Query: 427 ANKVIVKLAVTKIRDGDVLLTYGSSSAIEMILLHAHELGKQFRVVVVDSRPXXXXXXXXX 486
A +I L+ I DG +L +G S + IL + + K FRV+ + RP
Sbjct: 385 ARTIIAMLSQDFIFDGCTILVHGFSRVVFEILKTSAQNKKLFRVLCTEGRPDKTGVLLAN 444
Query: 487 XXXXXXXSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPV 546
+AV+Y M EV VF+GA V+ +G + + +GT +A+VA + PV
Sbjct: 445 ELAKLDIPVKLLIDSAVAYSMDEVDMVFVGADGVVESGGIINMMGTYQIALVAQSMNKPV 504
Query: 547 IVCCEAYKFHERVQLD 562
V E+YKF LD
Sbjct: 505 YVAAESYKFARLYPLD 520
>AT3G07300.2 | Symbols: | NagB/RpiA/CoA transferase-like
superfamily protein | chr3:2324967-2327380 REVERSE
LENGTH=407
Length = 407
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 397 AKLPLTVS---ESEAKTSLQSDIERFISEKIILA-NKVIVKLA----------VTKIRDG 442
A +P T S +SE+KT+ +S + R + +I N++I ++A + I
Sbjct: 150 ATVPYTSSSGADSESKTADKSSLTRKLKHDVIEGVNQLIQEIAGCHEQIAEQAIEHIHQN 209
Query: 443 DVLLTYGSSSAIEMILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINA 502
+V+LT GSS + L A E + FRV V + P T +A
Sbjct: 210 EVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVARGLQTTVITDSA 269
Query: 503 VSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIV------CCEAYKFH 556
V ++ V V +GA +V++NG V VG A+ A VP +V C Y +
Sbjct: 270 VFAMISRVNMVIIGAHAVMANGGVIGPVGVNMAALAAQKHAVPFVVLAGSHKLCPLYPHN 329
Query: 557 ERVQLDSICSNELGDPDIISNVLGREDVNYLDGWADIENLQLLN 600
V L NEL P + + E + LD A +LQ++N
Sbjct: 330 PEVLL-----NELRSPSELLDF--GEFSDCLDFGAGSGSLQVVN 366
>AT3G07300.1 | Symbols: | NagB/RpiA/CoA transferase-like
superfamily protein | chr3:2324967-2327380 REVERSE
LENGTH=407
Length = 407
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 397 AKLPLTVS---ESEAKTSLQSDIERFISEKIILA-NKVIVKLA----------VTKIRDG 442
A +P T S +SE+KT+ +S + R + +I N++I ++A + I
Sbjct: 150 ATVPYTSSSGADSESKTADKSSLTRKLKHDVIEGVNQLIQEIAGCHEQIAEQAIEHIHQN 209
Query: 443 DVLLTYGSSSAIEMILLHAHELGKQFRVVVVDSRPXXXXXXXXXXXXXXXXSCTYTHINA 502
+V+LT GSS + L A E + FRV V + P T +A
Sbjct: 210 EVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVARGLQTTVITDSA 269
Query: 503 VSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHAFRVPVIV------CCEAYKFH 556
V ++ V V +GA +V++NG V VG A+ A VP +V C Y +
Sbjct: 270 VFAMISRVNMVIIGAHAVMANGGVIGPVGVNMAALAAQKHAVPFVVLAGSHKLCPLYPHN 329
Query: 557 ERVQLDSICSNELGDPDIISNVLGREDVNYLDGWADIENLQLLN 600
V L NEL P + + E + LD A +LQ++N
Sbjct: 330 PEVLL-----NELRSPSELLDF--GEFSDCLDFGAGSGSLQVVN 366
>AT3G07300.3 | Symbols: | NagB/RpiA/CoA transferase-like
superfamily protein | chr3:2324967-2327380 REVERSE
LENGTH=409
Length = 409
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 78/185 (42%), Gaps = 13/185 (7%)
Query: 422 EKIILANKVIVKLAVTKIRDGDVLLTYGSSSAIEMILLHAHELGKQFRVVVVDSRPXXXX 481
++I ++ I + A+ I +V+LT GSS + L A E + FRV V + P
Sbjct: 191 QEIAGCHEQIAEQAIEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYQG 250
Query: 482 XXXXXXXXXXXXSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTVYSRVGTACVAMVAHA 541
T +AV ++ V V +GA +V++NG V VG A+ A
Sbjct: 251 HLLAKELVARGLQTTVITDSAVFAMISRVNMVIIGAHAVMANGGVIGPVGVNMAALAAQK 310
Query: 542 FRVPVIV------CCEAYKFHERVQLDSICSNELGDPDIISNVLGREDVNYLDGWADIEN 595
VP +V C Y + V L NEL P + + E + LD A +
Sbjct: 311 HAVPFVVLAGSHKLCPLYPHNPEVLL-----NELRSPSELLDF--GEFSDCLDFGAGSGS 363
Query: 596 LQLLN 600
LQ++N
Sbjct: 364 LQVVN 368