Miyakogusa Predicted Gene
- Lj0g3v0264339.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0264339.1 Non Chatacterized Hit- tr|E0CQN7|E0CQN7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.63,5e-19,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PGR3 (PROTON GRADIENT REGULATION 3),NU,CUFF.17427.1
(230 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 181 3e-46
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 5e-35
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 139 2e-33
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 139 2e-33
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 138 3e-33
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 137 5e-33
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 137 6e-33
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 137 7e-33
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 137 7e-33
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 8e-33
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 2e-32
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 134 5e-32
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 134 5e-32
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 134 7e-32
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 2e-31
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 2e-31
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 5e-31
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 6e-31
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 129 1e-30
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 128 3e-30
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 128 3e-30
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 6e-30
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 127 7e-30
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 7e-30
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 127 8e-30
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 124 5e-29
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 6e-29
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-28
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 2e-28
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 2e-28
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 3e-28
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 7e-28
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 8e-28
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 1e-27
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 3e-27
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 3e-27
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 118 4e-27
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 117 5e-27
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 6e-27
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 1e-26
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 115 2e-26
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 3e-26
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 3e-26
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 4e-26
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 4e-26
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 8e-26
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 9e-26
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 1e-25
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 1e-25
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 2e-25
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 2e-25
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 4e-25
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 4e-25
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 5e-25
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 6e-25
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 6e-25
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 110 9e-25
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 1e-24
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 2e-24
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 109 2e-24
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-24
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 3e-24
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 3e-24
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 4e-24
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 108 4e-24
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 4e-24
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 6e-24
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 7e-24
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 107 7e-24
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 8e-24
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 1e-23
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 1e-23
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 106 2e-23
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-23
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 2e-23
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 2e-23
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 3e-23
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 105 3e-23
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 3e-23
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 105 3e-23
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 6e-23
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 8e-23
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 8e-23
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 2e-22
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 2e-22
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 102 3e-22
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 3e-22
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 3e-22
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 4e-22
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 4e-22
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 4e-22
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 6e-22
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 7e-22
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 8e-22
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 9e-22
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 2e-21
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 2e-21
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 2e-21
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 98 4e-21
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 4e-21
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 4e-21
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 4e-21
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 5e-21
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 5e-21
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 7e-21
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 7e-21
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 7e-21
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 8e-21
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 1e-20
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 1e-20
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 2e-20
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 3e-20
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 96 3e-20
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 3e-20
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 95 4e-20
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 5e-20
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 5e-20
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 5e-20
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 7e-20
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 8e-20
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 9e-20
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 1e-19
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 1e-19
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 2e-19
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 2e-19
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-19
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 3e-19
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 5e-19
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 6e-19
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 6e-19
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 90 1e-18
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 1e-18
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 1e-18
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 1e-18
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 2e-18
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 4e-18
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 4e-18
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 5e-18
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 6e-18
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 7e-18
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 87 1e-17
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-17
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 2e-17
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 86 2e-17
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 86 2e-17
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 2e-17
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 6e-17
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 6e-17
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 6e-17
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 6e-17
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 8e-17
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 8e-17
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 9e-17
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 82 4e-16
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 82 4e-16
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 9e-16
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 7e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 6e-14
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 1e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-13
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 9e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 70 1e-12
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 69 3e-12
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 5e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 6e-12
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 7e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 67 9e-12
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 2e-11
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 66 2e-11
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 8e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 8e-11
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 1e-10
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-10
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-10
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 3e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 3e-10
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 4e-10
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 6e-10
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 61 8e-10
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 61 8e-10
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 60 9e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 9e-10
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 9e-10
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 60 1e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 1e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 4e-09
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 4e-09
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 4e-09
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 5e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 5e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 7e-09
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 7e-09
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 9e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 2e-08
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 2e-08
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 2e-08
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 56 2e-08
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 3e-08
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 3e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 55 3e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 3e-08
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 55 3e-08
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 55 3e-08
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 3e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 4e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 55 5e-08
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 6e-08
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 6e-08
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 7e-08
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 54 7e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 7e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 1e-07
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 1e-07
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 1e-07
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 53 2e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-07
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 3e-07
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 3e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 52 3e-07
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 3e-07
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 3e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 4e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 5e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 51 5e-07
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 6e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 6e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 7e-07
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 8e-07
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 8e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 9e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 50 1e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 49 2e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 2e-06
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 2e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 49 2e-06
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 2e-06
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 49 4e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 49 4e-06
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 49 4e-06
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 4e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 6e-06
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 6e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 48 7e-06
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 181 bits (460), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 120/169 (71%)
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+Q PSL YN M+K+ A SF + ++LF +LR G++PDN+T P VLK+IG L V +G
Sbjct: 6 LQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEG 65
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
KVH + +K+GLEFD+YV NSLM MYA LG++ ++F+E P RD VSWN +IS V
Sbjct: 66 EKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGN 125
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
RF++AI F+RM ES K +E T+VSTL+AC+AL+N E+G+ I+ ++
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV 174
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 36/250 (14%)
Query: 13 KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNV 72
+ + E +++ +GL+ D N LM + +S+G ++FD + Q + ++N
Sbjct: 60 RKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMY--ASLGKIEITHKVFDEMPQRDVVSWNG 117
Query: 73 MIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS 131
+I ++ G F AI +F+++ +E + D T L A L ++ G +++ FV+
Sbjct: 118 LISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE 177
Query: 132 GLEFDAYVCNSLMDM-------------------------------YAELGRLSDFKELF 160
E + N+L+DM Y GR+ + + LF
Sbjct: 178 -FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 161 EETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA 220
E +P +D V W M++G V+ RF EA+E F+ M+ + +P+ +VS LT CA
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQT-AGIRPDNFVLVSLLTGCAQTGAL 295
Query: 221 EVGKEIHSYI 230
E GK IH YI
Sbjct: 296 EQGKWIHGYI 305
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 1/167 (0%)
Query: 48 SIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPY 107
S G A +F+ + + M+ + + F A+ LF+ ++ G+ PDN+
Sbjct: 225 STGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVS 284
Query: 108 VLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
+L G + QG+ +H ++ ++ + D V +L+DMYA+ G + E+F E +RD
Sbjct: 285 LLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERD 344
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
SW +I G A++ + M + + T V+ LTAC
Sbjct: 345 TASWTSLIYGLAMNGMSGRALDLYYEME-NVGVRLDAITFVAVLTAC 390
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 8/162 (4%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSG-LQQDRDTLNKLMA---ISTDSSIGDFHYALRIFDH 61
+SLL C L+Q + + G + ++R T++K++ + + G AL +F
Sbjct: 283 VSLLTGCAQTGALEQGK---WIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYE 339
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
I++ ++ +I A G RA+ L+ ++ GV D T+ VL A G V +G
Sbjct: 340 IKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEG 399
Query: 122 RKV-HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
RK+ H+ + ++ + C+ L+D+ G L + +EL ++
Sbjct: 400 RKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDK 441
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 144 bits (363), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 31/254 (12%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
L CKSM EL +I L+ GL ++ +++ ++ S SS GD YA + + P
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPN 73
Query: 68 FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAF 127
+ +N +I+ F+ + ++IS++ Q+ G+ PD+ TYP+++K+ L + G +H
Sbjct: 74 YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCS 133
Query: 128 VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP----------------------- 164
V+KSGLE+D ++CN+L+ MY + ++LF+E P
Sbjct: 134 VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSA 193
Query: 165 --------DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAA 216
+RD V+W+ MI G V+ + +A+E F +M K NE T+VS + ACA
Sbjct: 194 RLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAH 253
Query: 217 LRNAEVGKEIHSYI 230
L GK +H YI
Sbjct: 254 LGALNRGKTVHRYI 267
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 86/169 (50%), Gaps = 4/169 (2%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN-YTYPYV 108
GD A +FD + + + ++ MI + K+G + +A+ +F Q+ G N T V
Sbjct: 188 GDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSV 247
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF--EETPDR 166
+ A LG + +G+ VH +++ L + SL+DMYA+ G + D +F +
Sbjct: 248 ICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKET 307
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
D + WN +I G +E+++ F +MR ESK P+E T + L AC+
Sbjct: 308 DALMWNAIIGGLASHGFIRESLQLFHKMR-ESKIDPDEITFLCLLAACS 355
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 127/226 (56%), Gaps = 2/226 (0%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
ISL++ C S+ +LKQ + +G D + +KL A++ SS YA ++FD I +P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP 93
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLF-QQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
+ F +N +I+A+A +I F + E +P+ YT+P+++KA + + G+ +
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H +KS + D +V NSL+ Y G L ++F ++D VSWN MI+G V+
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSP 213
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+A+E F++M E K + T+V L+ACA +RN E G+++ SYI
Sbjct: 214 DKALELFKKMESEDV-KASHVTMVGVLSACAKIRNLEFGRQVCSYI 258
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 108/214 (50%), Gaps = 31/214 (14%)
Query: 48 SIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPY 107
S GD A ++F I++ + ++N MI F +KGS +A+ LF+++ + V + T
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 108 VLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
VL A + ++ GR+V +++ ++ + + + N+++DMY + G + D K LF+ ++D
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRM-------------ESKEKPNEA--------- 205
NV+W M+ G + ++ A E M E KPNEA
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 206 ---------TVVSTLTACAALRNAEVGKEIHSYI 230
T+VSTL+ACA + E+G+ IHSYI
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 2/166 (1%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGVWPDNYTYPYVL 109
D+ A + + + Q + +N +I A+ + G A+ +F +L+ + + + T L
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A +G + GR +H+++ K G+ + +V ++L+ MY++ G L +E+F RD
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
W+ MI G EA++ F +M+ E+ KPN T + AC+
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQ-EANVKPNGVTFTNVFCACS 477
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 139 bits (349), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 126/226 (55%), Gaps = 2/226 (0%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTD-SSIGDFHYALRIFDHIQQ 64
+S L++C+S+ EL Q+ L+ S + ++ L++L+ T + YA +F+ I
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDC 69
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
PS++ +N MI+ ++ + +A+ +Q++ G PD +T+PYVLKA L D+ G V
Sbjct: 70 PSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCV 129
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H FV+K+G E + YV L+ MY G ++ +FE+ P + V+W +ISG V RF
Sbjct: 130 HGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRF 189
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+AIE F+ M+ + K NE +V L AC ++ GK H ++
Sbjct: 190 SDAIEAFREMQ-SNGVKANETIMVDLLVACGRCKDIVTGKWFHGFL 234
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 101/196 (51%), Gaps = 3/196 (1%)
Query: 32 QDRDTLNKLMA---ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAIS 88
Q + N ++A I + GD A +FD + + +L ++N +I +++ G A+
Sbjct: 244 QSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALC 303
Query: 89 LFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA 148
+F + + G+ PD T+ V++A G G+ +HA+V K+G DA + +L++MYA
Sbjct: 304 MFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYA 363
Query: 149 ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
+ G K+ FE+ +D ++W ++I G EA+ FQRM+ + P+ T +
Sbjct: 364 KTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYL 423
Query: 209 STLTACAALRNAEVGK 224
L AC+ + E G+
Sbjct: 424 GVLYACSHIGLVEEGQ 439
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 98/191 (51%), Gaps = 13/191 (6%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+ +Y LR+F+ I Q ++ + +I F F AI F++++ +GV + +L
Sbjct: 156 GEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLL 215
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAY----------VCNSLMDMYAELGRLSDFKEL 159
A G D+ G+ H F+ GL FD Y + SL+DMYA+ G L + L
Sbjct: 216 VACGRCKDIVTGKWFHGFL--QGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYL 273
Query: 160 FEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
F+ P+R VSWN +I+G + +EA+ F M ++ P++ T +S + A
Sbjct: 274 FDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDM-LDLGIAPDKVTFLSVIRASMIQGC 332
Query: 220 AEVGKEIHSYI 230
+++G+ IH+Y+
Sbjct: 333 SQLGQSIHAYV 343
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 12/201 (5%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
S+++ C + + I A + +G +D + L ++ + GD A + F+ +++
Sbjct: 327 SMIQGCSQLGQ--SIHAYVSKTGFVKDAAIVCAL--VNMYAKTGDAESAKKAFEDLEKKD 382
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDG-VWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ V+I A G A+S+FQ+++E G PD TY VL A +G V +G++
Sbjct: 383 TIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYF 442
Query: 126 AFVIK-SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-WNIMISGCVRCKR 183
A + GLE ++D+ + GR + + L + P + NV+ W +++GC
Sbjct: 443 AEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGC----D 498
Query: 184 FQEAIEFFQRMRMESKEKPNE 204
E +E R+R E P E
Sbjct: 499 IHENLELTDRIRSMVAE-PEE 518
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 130/218 (59%), Gaps = 8/218 (3%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
LLK C S+ +L+QIQA + +++ + K + +GDF+Y+ +F ++P+
Sbjct: 43 LLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAV------ELGDFNYSSFLFSVTEEPNH 96
Query: 68 FNYNVMIKAFAKK-GSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
+++N MI+ A+SL+++++ G+ PD +TY +V A L ++G GR VH+
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
+ K GLE D ++ +SL+ MYA+ G++ ++LF+E +RD VSWN MISG ++
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKD 216
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
A++ F++M E E P+E T+VS L AC+ L + G+
Sbjct: 217 AMDLFRKMEEEGFE-PDERTLVSMLGACSHLGDLRTGR 253
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 109/211 (51%), Gaps = 3/211 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+ + + +F GL++D + L+ + + G YA ++FD I + ++N MI ++
Sbjct: 152 RSVHSSLFKVGLERDVHINHSLIMMY--AKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G + A+ LF+++ E+G PD T +L A LGD+ GR + I + +
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ + L+ MY + G L + +F + +D V+W MI+ + + EA + F M ++
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEME-KT 328
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
P+ T+ + L+AC ++ E+GK+I ++
Sbjct: 329 GVSPDAGTLSTVLSACGSVGALELGKQIETH 359
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 103/214 (48%), Gaps = 9/214 (4%)
Query: 4 TCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +S+L +C + +L+ ++ + + +KL IS GD A R+F+
Sbjct: 235 TLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKL--ISMYGKCGDLDSARRVFN 292
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + + MI +++ G A LF ++ + GV PD T VL A G +G +
Sbjct: 293 QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+++ + L+ + YV L+DMY + GR+ + +FE P ++ +WN MI+
Sbjct: 353 GKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAH 412
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
+EA+ F RM + P++ T + L+AC
Sbjct: 413 QGHAKEALLLFDRMSV----PPSDITFIGVLSAC 442
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 137 bits (346), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 126/226 (55%), Gaps = 2/226 (0%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGD-FHYALRIFDHIQQ- 64
S LK+CK++ ELK + GL D T+ KL+A S + + +A +F++ +
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
+ F YN +I+ +A G AI LF ++ G+ PD YT+P+ L A G G ++
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H ++K G D +V NSL+ YAE G L +++F+E +R+ VSW MI G R
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++A++ F RM + + PN T+V ++ACA L + E G++++++I
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 113/212 (53%), Gaps = 4/212 (1%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
QI LI G +D N L+ + G+ A ++FD + + ++ ++ MI +A+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAE--CGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 80 KGSFRRAISLF-QQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ + A+ LF + +R++ V P++ T V+ A L D+ G KV+AF+ SG+E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ ++L+DMY + + K LF+E + N M S VR +EA+ F M M+S
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM-MDS 331
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+P+ +++S +++C+ LRN GK H Y+
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 36/261 (13%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T + ++ +C + +L+ ++ A I SG++ + ++ L+ + + D A R+FD
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV--AKRLFD 295
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+L N M + ++G R A+ +F + + GV PD + + + L ++
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW 355
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDM-------------------------------YAE 149
G+ H +V+++G E +CN+L+DM Y E
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
G + E FE P+++ VSWN +ISG V+ F+EAIE F M+ + + T++S
Sbjct: 416 NGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMS 475
Query: 210 TLTACAALRNAEVGKEIHSYI 230
+AC L ++ K I+ YI
Sbjct: 476 IASACGHLGALDLAKWIYYYI 496
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 2/178 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGVWPDNYTYPYV 108
G+ A F+ + + ++ ++N +I + F AI +F ++ ++GV D T +
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
A G LG + + ++ ++ K+G++ D + +L+DM++ G +F +RD
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+W I + AIE F M +E KP+ V LTAC+ + GKEI
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDM-IEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +S+ +C + L K I I +G+Q D L + S GD A+ IF+
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL--VDMFSRCGDPESAMSIFN 529
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + + I A A G+ RAI LF + E G+ PD + L A G V Q
Sbjct: 530 SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQ 589
Query: 121 GRKVHAFVIK-SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISGC 178
G+++ ++K G+ + ++D+ G L + +L E+ P + ++V WN +++ C
Sbjct: 590 GKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
+ A +++++ + E+ ++S + A A N
Sbjct: 650 RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 126/226 (55%), Gaps = 2/226 (0%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGD-FHYALRIFDHIQQ- 64
S LK+CK++ ELK + GL D T+ KL+A S + + +A +F++ +
Sbjct: 37 SSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESY 96
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
+ F YN +I+ +A G AI LF ++ G+ PD YT+P+ L A G G ++
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H ++K G D +V NSL+ YAE G L +++F+E +R+ VSW MI G R
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++A++ F RM + + PN T+V ++ACA L + E G++++++I
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI 262
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 113/212 (53%), Gaps = 4/212 (1%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
QI LI G +D N L+ + G+ A ++FD + + ++ ++ MI +A+
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAE--CGELDSARKVFDEMSERNVVSWTSMICGYAR 212
Query: 80 KGSFRRAISLF-QQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ + A+ LF + +R++ V P++ T V+ A L D+ G KV+AF+ SG+E +
Sbjct: 213 RDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDL 272
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ ++L+DMY + + K LF+E + N M S VR +EA+ F M M+S
Sbjct: 273 MVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM-MDS 331
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+P+ +++S +++C+ LRN GK H Y+
Sbjct: 332 GVRPDRISMLSAISSCSQLRNILWGKSCHGYV 363
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 121/261 (46%), Gaps = 36/261 (13%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T + ++ +C + +L+ ++ A I SG++ + ++ L+ + + D A R+FD
Sbjct: 238 TMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDV--AKRLFD 295
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+L N M + ++G R A+ +F + + GV PD + + + L ++
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW 355
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDM-------------------------------YAE 149
G+ H +V+++G E +CN+L+DM Y E
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
G + E FE P+++ VSWN +ISG V+ F+EAIE F M+ + + T++S
Sbjct: 416 NGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMS 475
Query: 210 TLTACAALRNAEVGKEIHSYI 230
+AC L ++ K I+ YI
Sbjct: 476 IASACGHLGALDLAKWIYYYI 496
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 2/178 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGVWPDNYTYPYV 108
G+ A F+ + + ++ ++N +I + F AI +F ++ ++GV D T +
Sbjct: 417 GEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSI 476
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
A G LG + + ++ ++ K+G++ D + +L+DM++ G +F +RD
Sbjct: 477 ASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDV 536
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+W I + AIE F M +E KP+ V LTAC+ + GKEI
Sbjct: 537 SAWTAAIGAMAMAGNAERAIELFDDM-IEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +S+ +C + L K I I +G+Q D L + S GD A+ IF+
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTL--VDMFSRCGDPESAMSIFN 529
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + + I A A G+ RAI LF + E G+ PD + L A G V Q
Sbjct: 530 SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQ 589
Query: 121 GRKVHAFVIK-SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISGC 178
G+++ ++K G+ + ++D+ G L + +L E+ P + ++V WN +++ C
Sbjct: 590 GKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAAC 649
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
+ A +++++ + E+ ++S + A A N
Sbjct: 650 RVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 134/257 (52%), Gaps = 33/257 (12%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSS-IGDFHYALRIFDHIQQ 64
+SLL +CK++ L+ I A + GL L+KL+ S YA+ +F IQ+
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P+L +N M + A A+ L+ + G+ P++YT+P+VLK+ +G+++
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----------------------------- 155
H V+K G + D YV SL+ MY + GRL D
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 156 --FKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
++LF+E P +D VSWN MISG ++EA+E F+ M M++ +P+E+T+V+ ++A
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTMVTVVSA 275
Query: 214 CAALRNAEVGKEIHSYI 230
CA + E+G+++H +I
Sbjct: 276 CAQSGSIELGRQVHLWI 292
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 108/197 (54%), Gaps = 1/197 (0%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
RD ++ I +S G A ++FD I + ++N MI +A+ G+++ A+ LF+ +
Sbjct: 198 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 257
Query: 94 REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRL 153
+ V PD T V+ A G + GR+VH ++ G + + N+L+D+Y++ G L
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 154 SDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
LFE P +D +SWN +I G ++EA+ FQ M + S E PN+ T++S L A
Sbjct: 318 ETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEM-LRSGETPNDVTMLSILPA 376
Query: 214 CAALRNAEVGKEIHSYI 230
CA L ++G+ IH YI
Sbjct: 377 CAHLGAIDIGRWIHVYI 393
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 109/230 (47%), Gaps = 8/230 (3%)
Query: 2 KGTCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
+ T ++++ +C + +Q+ I G + +N L I S G+ A +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNAL--IDLYSKCGELETACGL 323
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
F+ + + ++N +I + ++ A+ LFQ++ G P++ T +L A LG +
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 119 GQGRKVHAFVIK--SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
GR +H ++ K G+ + + SL+DMYA+ G + ++F + SWN MI
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
G R + + F RMR + +P++ T V L+AC+ ++G+ I
Sbjct: 444 GFAMHGRADASFDLFSRMR-KIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD A ++F+ I SL ++N MI FA G + LF ++R+ G+ PD+ T+ +L
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 110 KAIGCLGDVGQGRKVHAFVI---KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
A G + GR + + K + + Y C ++D+ LG FKE E
Sbjct: 478 SACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC--MIDL---LGHSGLFKEAEEMINMM 532
Query: 167 ----DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
D V W ++ C + F + + E P ++S + A A N EV
Sbjct: 533 EMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN-EV 591
Query: 223 GK 224
K
Sbjct: 592 AK 593
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 137 bits (345), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 124/222 (55%), Gaps = 3/222 (1%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
LL+ C S+ EL+QI L+F +GL Q+ KL +S G A R+F+ I
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKL--VSLFCRYGSVDEAARVFEPIDSKLN 100
Query: 68 FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAF 127
Y+ M+K FAK +A+ F ++R D V P Y + Y+LK G ++ G+++H
Sbjct: 101 VLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGL 160
Query: 128 VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEA 187
++KSG D + L +MYA+ ++++ +++F+ P+RD VSWN +++G + + A
Sbjct: 161 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 188 IEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+E + M E KP+ T+VS L A +ALR VGKEIH Y
Sbjct: 221 LEMVKSM-CEENLKPSFITIVSVLPAVSALRLISVGKEIHGY 261
Score = 110 bits (275), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 118/223 (52%), Gaps = 6/223 (2%)
Query: 8 LLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
LLK C EL K+I L+ SG D + L + + A ++FD + +
Sbjct: 141 LLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCR--QVNEARKVFDRMPE 198
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
L ++N ++ +++ G R A+ + + + E+ + P T VL A+ L + G+++
Sbjct: 199 RDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEI 258
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H + ++SG + + +L+DMYA+ G L ++LF+ +R+ VSWN MI V+ +
Sbjct: 259 HGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENP 318
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+EA+ FQ+M ++ KP + +V+ L ACA L + E G+ IH
Sbjct: 319 KEAMLIFQKM-LDEGVKPTDVSVMGALHACADLGDLERGRFIH 360
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 6/223 (2%)
Query: 4 TCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
+ + L +C + +L++ I L GL ++ +N L IS + A +F
Sbjct: 339 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSL--ISMYCKCKEVDTAASMFG 396
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+Q +L ++N MI FA+ G A++ F Q+R V PD +TY V+ AI L
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHH 456
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
+ +H V++S L+ + +V +L+DMYA+ G + + +F+ +R +WN MI G
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
+ A+E F+ M+ + KPN T +S ++AC+ E G
Sbjct: 517 HGFGKAALELFEEMQ-KGTIKPNGVTFLSVISACSHSGLVEAG 558
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 105/202 (51%), Gaps = 6/202 (2%)
Query: 34 RDTLNKLMAISTD-----SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAIS 88
R + L+ IST + G A ++FD + + ++ ++N MI A+ + + + A+
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAML 323
Query: 89 LFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA 148
+FQ++ ++GV P + + L A LGD+ +GR +H ++ GL+ + V NSL+ MY
Sbjct: 324 IFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYC 383
Query: 149 ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
+ + +F + R VSWN MI G + R +A+ +F +MR + KP+ T V
Sbjct: 384 KCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV-KPDTFTYV 442
Query: 209 STLTACAALRNAEVGKEIHSYI 230
S +TA A L K IH +
Sbjct: 443 SVITAIAELSITHHAKWIHGVV 464
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 137/236 (58%), Gaps = 7/236 (2%)
Query: 1 MKGTCISLLKS--CKSMCELKQIQALIFCSGLQQDRDTLNK--LMAISTDSSIGDFHYAL 56
M CI+LL++ S+ +L+QI A G+ L K + + + S YA
Sbjct: 14 MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73
Query: 57 RIFDHIQQP-SLFNYNVMIKAFAKKGSFRRAISLFQQLREDG-VWPDNYTYPYVLKAIGC 114
++F I++P ++F +N +I+ +A+ G+ A SL++++R G V PD +TYP+++KA+
Sbjct: 74 KVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTT 133
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ DV G +H+ VI+SG YV NSL+ +YA G ++ ++F++ P++D V+WN +
Sbjct: 134 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 193
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
I+G + +EA+ + M + KP+ T+VS L+ACA + +GK +H Y+
Sbjct: 194 INGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTLGKRVHVYM 248
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 112/211 (53%), Gaps = 5/211 (2%)
Query: 8 LLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
L+K+ +M +++ I +++ SG N L+ + + GD A ++FD + +
Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC--GDVASAYKVFDKMPE 184
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
L +N +I FA+ G A++L+ ++ G+ PD +T +L A +G + G++V
Sbjct: 185 KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 244
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H ++IK GL + + N L+D+YA GR+ + K LF+E D+++VSW +I G
Sbjct: 245 HVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFG 304
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+EAIE F+ M P E T V L AC+
Sbjct: 305 KEAIELFKYMESTEGLLPCEITFVGILYACS 335
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 135 bits (341), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
AL++FD + + F +NVMIK F G + A+ + ++ GV D +TYP+V+K++
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ + +G+K+HA VIK G D YVCNSL+ +Y +LG D +++FEE P+RD VSWN M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
ISG + ++ F+ M ++ KP+ + +S L AC+ + + ++GKEIH +
Sbjct: 203 ISGYLALGDGFSSLMLFKEM-LKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH 256
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 100/185 (54%), Gaps = 6/185 (3%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLRE-DGVWPDNYTY 105
S G+ YA RIF+ + Q ++ +NVMI +A+ G A FQ++ E +G+ PD T
Sbjct: 278 SKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITS 337
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
+L A L +GR +H + ++ G + +L+DMY E G+L + +F+ +
Sbjct: 338 INLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAE 393
Query: 166 RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
++ +SWN +I+ V+ + A+E FQ + +S P+ T+ S L A A + G+E
Sbjct: 394 KNVISWNSIIAAYVQNGKNYSALELFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 226 IHSYI 230
IH+YI
Sbjct: 453 IHAYI 457
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A IFD + + ++ ++N +I A+ + G A+ LFQ+L + + PD+ T +L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A + +GR++HA+++KS + + NSL+ MYA G L D ++ F +D V
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVV 498
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
SWN +I + ++ F M + S+ PN++T S L AC+
Sbjct: 499 SWNSIIMAYAVHGFGRISVWLFSEM-IASRVNPNKSTFASLLAACS 543
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 110/225 (48%), Gaps = 7/225 (3%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
I + S+ E K+I A++ G D N L IS +G A ++F+ + +
Sbjct: 137 IKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSL--ISLYMKLGCAWDAEKVFEEMPER 194
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ ++N MI + G ++ LF+++ + G PD ++ L A + G+++H
Sbjct: 195 DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH 254
Query: 126 AFVIKSGLEF-DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
++S +E D V S++DMY++ G +S + +F R+ V+WN+MI R R
Sbjct: 255 CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRV 314
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+A FQ+M ++ +P+ T ++ L A A L G+ IH Y
Sbjct: 315 TDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHGY 355
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 128/225 (56%), Gaps = 3/225 (1%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSI-GDFHYALRIFDHIQQ 64
I L+ C S+ EL QIQA S ++ D + KL+ T+S YA +F+ + +
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMSE 91
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P + +N M + +++ + SLF ++ EDG+ PDNYT+P +LKA + +GR++
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H +K GL+ + YVC +L++MY E + + +F+ + V +N MI+G R R
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRP 211
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
EA+ F+ M+ + KPNE T++S L++CA L + ++GK IH Y
Sbjct: 212 NEALSLFREMQGKYL-KPNEITLLSVLSSCALLGSLDLGKWIHKY 255
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 114/225 (50%), Gaps = 6/225 (2%)
Query: 7 SLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SLLK+C K++ E +Q+ L GL + L+ + T+ D A +FD I
Sbjct: 134 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE--DVDSARCVFDRIV 191
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+P + YN MI +A++ A+SLF++++ + P+ T VL + LG + G+
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H + K V +L+DM+A+ G L D +FE+ +D +W+ MI +
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
++++ F+RMR E+ + P+E T + L AC+ E G++ S
Sbjct: 312 AEKSMLMFERMRSENVQ-PDEITFLGLLNACSHTGRVEEGRKYFS 355
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 126/226 (55%), Gaps = 5/226 (2%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
SL+ S +LKQI A + GLQ + KL I SS GD +A ++FD + +P
Sbjct: 26 SLIDSATHKAQLKQIHARLLVLGLQFSGFLITKL--IHASSSFGDITFARQVFDDLPRPQ 83
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
+F +N +I+ +++ F+ A+ ++ ++ V PD++T+P++LKA L + GR VHA
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHA 143
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFE--ETPDRDNVSWNIMISGCVRCKRF 184
V + G + D +V N L+ +YA+ RL + +FE P+R VSW ++S +
Sbjct: 144 QVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEP 203
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA+E F +MR + KP+ +VS L A L++ + G+ IH+ +
Sbjct: 204 MEALEIFSQMR-KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASV 248
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 121/229 (52%), Gaps = 10/229 (4%)
Query: 8 LLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTD-SSIGDFHYALRIFDHIQ 63
LLK+C + L+ + A +F G D N L+A+ +G A +F+ +
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS---ARTVFEGLP 181
Query: 64 QP--SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
P ++ ++ ++ A+A+ G A+ +F Q+R+ V PD VL A CL D+ QG
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
R +HA V+K GLE + + SL MYA+ G+++ K LF++ + + WN MISG +
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+EAI+ F M + +P+ ++ S ++ACA + + E + ++ Y+
Sbjct: 302 GYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYV 349
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 108/212 (50%), Gaps = 6/212 (2%)
Query: 6 ISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
+S+L + + +LKQ I A + GL+ + D L L + + G A +FD +
Sbjct: 226 VSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY--AKCGQVATAKILFDKM 283
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
+ P+L +N MI +AK G R AI +F ++ V PD + + A +G + Q R
Sbjct: 284 KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQAR 343
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
++ +V +S D ++ ++L+DM+A+ G + + +F+ T DRD V W+ MI G
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHG 403
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
R +EAI ++ M PN+ T + L AC
Sbjct: 404 RAREAISLYRAME-RGGVHPNDVTFLGLLMAC 434
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 134 bits (336), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 129/229 (56%), Gaps = 9/229 (3%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTL---NKLMAISTDSSIGDFHYALRIFDHIQ 63
SL ++C M +LKQ+ A + ++ TL K++ +S SS D +YA R+FD I+
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLS--SSFSDVNYAFRVFDSIE 110
Query: 64 QPSLFNYNVMIKAFAKKGSFRR-AISLFQQLREDG-VWPDNYTYPYVLKAIGCLGDVGQG 121
S F +N +I+A A S + A L++++ E G PD +T+P+VLKA + +G
Sbjct: 111 NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEG 170
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
++VH ++K G D YV N L+ +Y G L +++F+E P+R VSWN MI VR
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ A++ F+ M+ +P+ T+ S L+ACA L + +G H+++
Sbjct: 231 GEYDSALQLFR--EMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 12/221 (5%)
Query: 2 KGTCISLLKSCK---SMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
K T +LK+C E KQ+ I G D N L+ + S G A ++
Sbjct: 151 KHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLY--GSCGCLDLARKV 208
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
FD + + SL ++N MI A + G + A+ LF++++ PD YT VL A LG +
Sbjct: 209 FDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSL 267
Query: 119 GQGRKVHAFVIKS---GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMI 175
G HAF+++ + D V NSL++MY + G L +++F+ RD SWN MI
Sbjct: 268 SLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMI 327
Query: 176 SGCVRCKRFQEAIEFFQRMRMESKE--KPNEATVVSTLTAC 214
G R +EA+ FF RM ++ +E +PN T V L AC
Sbjct: 328 LGFATHGRAEEAMNFFDRM-VDKRENVRPNSVTFVGLLIAC 367
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 133/261 (50%), Gaps = 37/261 (14%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGD-----FHYALRIFD 60
++LL+SC S +LK I + + L D ++L+A+ D S + YA IF
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
IQ P+LF +N++I+ F+ +A + Q+ + +WPDN T+P+++KA + V
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYA-------------------------------E 149
G + H+ +++ G + D YV NSL+ MYA +
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
G + + +E+F+E P R+ +W+IMI+G + F++AI+ F+ M+ E NE +VS
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV-VANETVMVS 254
Query: 210 TLTACAALRNAEVGKEIHSYI 230
+++CA L E G+ + Y+
Sbjct: 255 VISSCAHLGALEFGERAYEYV 275
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 97/194 (50%), Gaps = 1/194 (0%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
RD ++ ++ G A +FD + +LF +++MI +AK F +AI LF+ +
Sbjct: 181 RDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFM 240
Query: 94 REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRL 153
+ +GV + V+ + LG + G + + +V+KS + + + +L+DM+ G +
Sbjct: 241 KREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDI 300
Query: 154 SDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
+FE P+ D++SW+ +I G +A+ +F +M + P + T + L+A
Sbjct: 301 EKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM-ISLGFIPRDVTFTAVLSA 359
Query: 214 CAALRNAEVGKEIH 227
C+ E G EI+
Sbjct: 360 CSHGGLVEKGLEIY 373
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 132 bits (332), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/211 (34%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 17 ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKA 76
+LK+I A++ +G + L +L+ IGD YA ++FD + +P +F +N + K
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLL--ENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKG 83
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFD 136
+ + ++ L++++R+ GV PD +TYP+V+KAI LGD G +HA V+K G
Sbjct: 84 YVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 137 AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRM 196
V L+ MY + G LS + LFE +D V+WN ++ CV+ A+E+F +M
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 197 ESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
++ + + TVVS L+AC L + E+G+EI+
Sbjct: 204 DAVQF-DSFTVVSMLSACGQLGSLEIGEEIY 233
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 1/166 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+ A +F+ +Q L +N + + G+ A+ F ++ D V D++T +L
Sbjct: 158 GELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSML 217
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A G LG + G +++ K ++ + V N+ +DM+ + G + LFEE R+ V
Sbjct: 218 SACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVV 277
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
SW+ MI G +EA+ F M+ E +PN T + L+AC+
Sbjct: 278 SWSTMIVGYAMNGDSREALTLFTTMQNEGL-RPNYVTFLGVLSACS 322
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 130 bits (328), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 127/227 (55%), Gaps = 5/227 (2%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSI-GDFHYALRIFDHIQQP 65
SLL + + + +AL C + R + + L +S ++ G YA ++F+ + Q
Sbjct: 20 SLLNHFAATQSISKTKAL-HCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQS 78
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGV--WPDNYTYPYVLKAIGCLGDVGQGRK 123
SL +YN++I+ + ++G + AIS+F ++ +GV PD YTYP+V KA G L + G
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VH +++S D YV N+L+ MY G++ +++F+ +RD +SWN MISG R
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+A+ F M ES + + AT+VS L C L++ E+G+ +H +
Sbjct: 199 MNDALMMFDWMVNESVD-LDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 102/217 (47%), Gaps = 3/217 (1%)
Query: 13 KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNV 72
KSM + I S +D+ N L+A+ + G A +FD ++ + ++N
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMN--FGKVEMARDVFDVMKNRDVISWNT 188
Query: 73 MIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSG 132
MI + + G A+ +F + + V D+ T +L G L D+ GR VH V +
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR 248
Query: 133 LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
L V N+L++MY + GR+ + + +F+ RD ++W MI+G + A+E +
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR 308
Query: 193 RMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
M+ E +PN T+ S ++ C GK +H +
Sbjct: 309 LMQFEGV-RPNAVTIASLVSVCGDALKVNDGKCLHGW 344
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 107/231 (46%), Gaps = 6/231 (2%)
Query: 3 GTCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
T +S+L C + +L + + L+ L + N L ++ G A +F
Sbjct: 219 ATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNAL--VNMYLKCGRMDEARFVF 276
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
D +++ + + MI + + G A+ L + ++ +GV P+ T ++ G V
Sbjct: 277 DRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVN 336
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G+ +H + ++ + D + SL+ MYA+ R+ +F W+ +I+GCV
Sbjct: 337 DGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCV 396
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ + +A+ F+RMR E E PN AT+ S L A AAL + IH Y+
Sbjct: 397 QNELVSDALGLFKRMRREDVE-PNIATLNSLLPAYAALADLRQAMNIHCYL 446
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG 116
R+F + ++ +I + A+ LF+++R + V P+ T +L A L
Sbjct: 375 RVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALA 434
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF----EETPDRDNVSWN 172
D+ Q +H ++ K+G L+ +Y++ G L ++F E+ +D V W
Sbjct: 435 DLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWG 494
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ISG A++ F M + S PNE T S L AC+
Sbjct: 495 ALISGYGMHGDGHNALQVFMEM-VRSGVTPNEITFTSALNACS 536
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 105 YPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
Y +L + + + +H VI G ++ ++L YA G ++ ++LFEE P
Sbjct: 18 YQSLLNHFAATQSISKTKALHCHVITGG-RVSGHILSTLSVTYALCGHITYARKLFEEMP 76
Query: 165 DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES-KEKPNEATVVSTLTACAALRNAEVG 223
+S+NI+I VR + +AI F RM E K P+ T A L++ ++G
Sbjct: 77 QSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLG 136
Query: 224 KEIHSYI 230
+H I
Sbjct: 137 LVVHGRI 143
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 130/234 (55%), Gaps = 10/234 (4%)
Query: 1 MKGTCISLLKSCKSMCELKQIQALIFCS----GLQQDRDTLNKLMAISTDSSIGDFHYAL 56
++ +CI +L C+S +I I C GL ++ D N L+++ + A
Sbjct: 23 LQKSCIRILSFCESNS--SRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTD--GIWNAR 78
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG 116
++FD + ++F + VMI AF K F A+SLF+++ G P+ +T+ V+++ L
Sbjct: 79 KLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLR 138
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
D+ G +VH VIK+G E ++ V +SL D+Y++ G+ + ELF + D +SW +MIS
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
V ++++EA++F+ M +++ PNE T V L A + L E GK IHS I
Sbjct: 199 SLVGARKWREALQFYSEM-VKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNI 250
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIG 113
YA + +++ Y ++ F + G A+S+ + DG+ D + P + A
Sbjct: 480 YAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASA 539
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
LG + G+ +H + +KSG A V NSL+DMY++ G L D K++FEE D VSWN
Sbjct: 540 NLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNG 599
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
++SG A+ F+ MRM+ E P+ T + L+AC+ R ++G E
Sbjct: 600 LVSGLASNGFISSALSAFEEMRMKETE-PDSVTFLILLSACSNGRLTDLGLE 650
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 96/182 (52%), Gaps = 2/182 (1%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
S G F A +F +Q ++ +MI + +R A+ + ++ + GV P+ +T+
Sbjct: 170 SKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFV 229
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
+L A LG + G+ +H+ +I G+ + + SL+D Y++ ++ D + + ++
Sbjct: 230 KLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ 288
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
D W ++SG VR R +EA+ F MR + PN T + L+ C+A+R+ + GK+I
Sbjct: 289 DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQ-PNNFTYSAILSLCSAVRSLDFGKQI 347
Query: 227 HS 228
HS
Sbjct: 348 HS 349
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A+R+ + + +F + ++ F + + A+ F ++R G+ P+N+TY +L
Sbjct: 278 AVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSA 337
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLS-DFKELFEETPDRDNVSWNI 173
+ + G+++H+ IK G E V N+L+DMY + + +F + VSW
Sbjct: 338 VRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTT 397
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+I G V Q+ M ++ + +PN T+ L AC+ LR+ EIH+Y+
Sbjct: 398 LILGLVDHGFVQDCFGLLMEM-VKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYL 453
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 100/229 (43%), Gaps = 12/229 (5%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
+SL + +S+ KQI + G + D N L+ + S + A R+F + P
Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVE-ASRVFGAMVSP 390
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
++ ++ +I G + L ++ + V P+ T VL+A L V + ++H
Sbjct: 391 NVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIH 450
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
A++++ ++ + V NSL+D YA ++ + RDN+++ +++ + +
Sbjct: 451 AYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHE 510
Query: 186 EAIEFFQRM-----RMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
A+ M RM+ P ++A A L E GK +H Y
Sbjct: 511 MALSVINYMYGDGIRMDQLSLPG------FISASANLGALETGKHLHCY 553
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 129 bits (325), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 108/182 (59%), Gaps = 2/182 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ-LREDGVWPDNYTYPYV 108
G+ A +F + + +LF++NV++ +AK+G F A+ L+ + L GV PD YT+P V
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCV 202
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
L+ G + D+ +G++VH V++ G E D V N+L+ MY + G + + LF+ P RD
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDI 262
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+SWN MISG E +E F MR S + P+ T+ S ++AC L + +G++IH+
Sbjct: 263 ISWNAMISGYFENGMCHEGLELFFAMRGLSVD-PDLMTLTSVISACELLGDRRLGRDIHA 321
Query: 229 YI 230
Y+
Sbjct: 322 YV 323
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 114/223 (51%), Gaps = 6/223 (2%)
Query: 8 LLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
+L++C + +L K++ + G + D D +N L+ + GD A +FD + +
Sbjct: 202 VLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV--KCGDVKSARLLFDRMPR 259
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
+ ++N MI + + G + LF +R V PD T V+ A LGD GR +
Sbjct: 260 RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI 319
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
HA+VI +G D VCNSL MY G + ++LF +D VSW MISG
Sbjct: 320 HAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLP 379
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+AI+ ++ M +S KP+E TV + L+ACA L + + G E+H
Sbjct: 380 DKAIDTYRMMDQDSV-KPDEITVAAVLSACATLGDLDTGVELH 421
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 113/229 (49%), Gaps = 11/229 (4%)
Query: 9 LKSCKSMCEL-------KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH 61
L S S CEL + I A + +G D N L + ++ G + A ++F
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA--GSWREAEKLFSR 357
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+++ + ++ MI + +AI ++ + +D V PD T VL A LGD+ G
Sbjct: 358 MERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTG 417
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
++H IK+ L V N+L++MY++ + ++F P ++ +SW +I+G
Sbjct: 418 VELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLN 477
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
R EA+ F ++M+M +PN T+ + L ACA + GKEIH+++
Sbjct: 478 NRCFEALIFLRQMKMTL--QPNAITLTAALAACARIGALMCGKEIHAHV 524
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 86/161 (53%), Gaps = 3/161 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
AL IF +I + ++ ++ +I A+ +Q++ + P+ T L A
Sbjct: 452 ALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACAR 510
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+G + G+++HA V+++G+ D ++ N+L+DMY GR++ F + +D SWNI+
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNIL 569
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
++G + +E F RM ++S+ +P+E T +S L C+
Sbjct: 570 LTGYSERGQGSMVVELFDRM-VKSRVRPDEITFISLLCGCS 609
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%)
Query: 74 IKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL 133
+ G A+ L ++E V D + +++ +G KV++ + S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 134 EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQR 193
+ N+ + M+ G L D +F + +R+ SWN+++ G + F EA+ + R
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 194 MRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
M KP+ T L C + + GKE+H ++
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHV 222
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 124/252 (49%), Gaps = 35/252 (13%)
Query: 12 CKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYN 71
C +M ELKQI A + +GL D T ++++A +S D +YA +F I + F +N
Sbjct: 35 CSTMRELKQIHASLIKTGLISDTVTASRVLAFCC-ASPSDMNYAYLVFTRINHKNPFVWN 93
Query: 72 VMIKAFAKKGSFRRAISLFQQL--REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
+I+ F++ AIS+F + V P TYP V KA G LG GR++H VI
Sbjct: 94 TIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVI 153
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC-------- 181
K GLE D+++ N+++ MY G L + +F D V+WN MI G +C
Sbjct: 154 KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQN 213
Query: 182 -----------------------KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALR 218
RF++A++ F+ M+ E KP+ T+VS L ACA L
Sbjct: 214 LFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQ-EKDVKPDGFTMVSLLNACAYLG 272
Query: 219 NAEVGKEIHSYI 230
+E G+ IH YI
Sbjct: 273 ASEQGRWIHEYI 284
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 1/166 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A +FD + Q + ++N MI F + G F+ A+ +F++++E V PD +T +L
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A LG QGR +H +++++ E ++ V +L+DMY + G + + +FE P +
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
WN MI G + A++ F + S +P+ + + LTACA
Sbjct: 326 CWNSMILGLANNGFEERAMDLFSELE-RSGLEPDSVSFIGVLTACA 370
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 128/256 (50%), Gaps = 35/256 (13%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
I L+ KS E K+I A I GL Q + K++ I D YA R+F+ + P
Sbjct: 14 IPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNP 71
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
++F YN +I+A+ + I +++QL R+ PD +T+P++ K+ LG G++V
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQV 131
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H + K G F N+L+DMY + L D ++F+E +RD +SWN ++SG R +
Sbjct: 132 HGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQM 191
Query: 185 Q-------------------------------EAIEFFQRMRMESKEKPNEATVVSTLTA 213
+ EA++FF+ M++ E P+E +++S L +
Sbjct: 192 KKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIE-PDEISLISVLPS 250
Query: 214 CAALRNAEVGKEIHSY 229
CA L + E+GK IH Y
Sbjct: 251 CAQLGSLELGKWIHLY 266
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 94/183 (51%), Gaps = 1/183 (0%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
+RD ++ +S + +G A +F + ++ ++ MI + G + A+ F++
Sbjct: 172 ERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFRE 231
Query: 93 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR 152
++ G+ PD + VL + LG + G+ +H + + G VCN+L++MY++ G
Sbjct: 232 MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGV 291
Query: 153 LSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
+S +LF + +D +SW+ MISG AIE F M+ +K KPN T + L+
Sbjct: 292 ISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQ-RAKVKPNGITFLGLLS 350
Query: 213 ACA 215
AC+
Sbjct: 351 ACS 353
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 127 bits (319), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 138/285 (48%), Gaps = 63/285 (22%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
L ++CK++ LKQI A + +GL + + +L+ ++ S G YA ++FD I +P +
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDV 77
Query: 68 FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAF 127
N +++ A+ + +SL+ ++ + GV PD YT+ +VLKA L G H
Sbjct: 78 SICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGK 137
Query: 128 VIKSGLEFDAYVCNSLM-------DM------------------------YAELGRLSDF 156
V++ G + YV N+L+ D+ YA+ G++ +
Sbjct: 138 VVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 157 KELFEETPDRDNVSWNIMISGCVRCK----------RF---------------------Q 185
LF+E P +D V+WN+MI+GC++CK RF +
Sbjct: 198 MRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPK 257
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA+ F+ MR ++ E P+ T++S L+ACA L + E GK +H YI
Sbjct: 258 EALGIFKEMR-DAGEHPDVVTILSLLSACAVLGDLETGKRLHIYI 301
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 92/181 (50%), Gaps = 7/181 (3%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A +FD + + +N MI + G + A+ +F+++R+ G PD T +L A
Sbjct: 228 ARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 115 LGDVGQGRKVHAFV-----IKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
LGD+ G+++H ++ + S + + N+L+DMYA+ G + E+F DRD
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLS 347
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+WN +I G + + +IE F+ M+ K PNE T + + AC+ + G++ S
Sbjct: 348 TWNTLIVG-LALHHAEGSIEMFEEMQ-RLKVWPNEVTFIGVILACSHSGRVDEGRKYFSL 405
Query: 230 I 230
+
Sbjct: 406 M 406
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 127 bits (319), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 129/260 (49%), Gaps = 38/260 (14%)
Query: 2 KGTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH 61
+ T IS+L+SCK++ + I A I + QD + +L+ + S++ YA +F +
Sbjct: 29 RKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVC--STLDSVDYAYDVFSY 86
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+ P+++ Y MI F G +SL+ ++ + V PDNY VLKA D+
Sbjct: 87 VSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVC 142
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS----------- 170
R++HA V+K G V +M++Y + G L + K++F+E PDRD+V+
Sbjct: 143 REIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSEC 202
Query: 171 --------------------WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVST 210
W MI G VR K +A+E F+ M+ME+ NE T V
Sbjct: 203 GFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV-SANEFTAVCV 261
Query: 211 LTACAALRNAEVGKEIHSYI 230
L+AC+ L E+G+ +HS++
Sbjct: 262 LSACSDLGALELGRWVHSFV 281
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 1/194 (0%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
DRD + + I+ S G AL +F ++ + MI + +A+ LF++
Sbjct: 186 DRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFRE 245
Query: 93 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR 152
++ + V + +T VL A LG + GR VH+FV +E +V N+L++MY+ G
Sbjct: 246 MQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGD 305
Query: 153 LSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
+++ + +F D+D +S+N MISG EAI F+ M + +PN+ T+V+ L
Sbjct: 306 INEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDM-VNRGFRPNQVTLVALLN 364
Query: 213 ACAALRNAEVGKEI 226
AC+ ++G E+
Sbjct: 365 ACSHGGLLDIGLEV 378
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 127 bits (318), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 124/257 (48%), Gaps = 33/257 (12%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDF-HYALRIFDHIQQ 64
+S L+ C ELKQI A + +GL QD + K ++ S+ DF YA +FD +
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDR 77
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P F +N+MI+ F+ R++ L+Q++ + YT+P +LKA L + ++
Sbjct: 78 PDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI 137
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWN------------ 172
HA + K G E D Y NSL++ YA G LF+ P+ D+VSWN
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 173 -------------------IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
MISG V+ +EA++ F M+ S +P+ ++ + L+A
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQ-NSDVEPDNVSLANALSA 256
Query: 214 CAALRNAEVGKEIHSYI 230
CA L E GK IHSY+
Sbjct: 257 CAQLGALEQGKWIHSYL 273
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 119/254 (46%), Gaps = 37/254 (14%)
Query: 7 SLLKSCKSMC---ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SLLK+C ++ E QI A I G + D +N L I++ + G+F A +FD I
Sbjct: 120 SLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSL--INSYAVTGNFKLAHLLFDRIP 177
Query: 64 QPSLFNYNVMIKAFAKKGS-------FRR------------------------AISLFQQ 92
+P ++N +IK + K G FR+ A+ LF +
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHE 237
Query: 93 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR 152
++ V PDN + L A LG + QG+ +H+++ K+ + D+ + L+DMYA+ G
Sbjct: 238 MQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGE 297
Query: 153 LSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
+ + E+F+ + +W +ISG +EAI F M+ + KPN T + LT
Sbjct: 298 MEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAVLT 356
Query: 213 ACAALRNAEVGKEI 226
AC+ E GK I
Sbjct: 357 ACSYTGLVEEGKLI 370
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 127 bits (318), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 130/228 (57%), Gaps = 4/228 (1%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
+SLL+ CK + LKQIQA + +GL D ++L+A S Y+++I I+ P
Sbjct: 57 LSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENP 116
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGV---WPDNYTYPYVLKAIGCLGDVGQGR 122
++F++NV I+ F++ + + + L++Q+ G PD++TYP + K L G
Sbjct: 117 NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGH 176
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
+ V+K LE ++V N+ + M+A G + + +++F+E+P RD VSWN +I+G +
Sbjct: 177 MILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIG 236
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++AI ++ M E KP++ T++ +++C+ L + GKE + Y+
Sbjct: 237 EAEKAIYVYKLMESEGV-KPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 32/220 (14%)
Query: 42 AISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPD 101
+I +S GD A ++FD L ++N +I + K G +AI +++ + +GV PD
Sbjct: 197 SIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPD 256
Query: 102 NYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM--------------- 146
+ T ++ + LGD+ +G++ + +V ++GL + N+LMDM
Sbjct: 257 DVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 147 ----------------YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEF 190
YA G L ++LF++ ++D V WN MI G V+ KR Q+A+
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 191 FQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
FQ M+ S KP+E T++ L+AC+ L +VG IH YI
Sbjct: 377 FQEMQ-TSNTKPDEITMIHCLSACSQLGALDVGIWIHRYI 415
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 117/259 (45%), Gaps = 37/259 (14%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T I L+ SC + +L K+ + +GL+ +N LM + S GD H A RIFD
Sbjct: 259 TMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF--SKCGDIHEARRIFD 316
Query: 61 HIQQPSLFNYNVMIKAFAKKGSF-------------------------------RRAISL 89
++++ ++ ++ MI +A+ G + A++L
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
FQ+++ PD T + L A LG + G +H ++ K L + + SL+DMYA+
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAK 436
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
G +S+ +F R+++++ +I G AI +F M +++ P+E T +
Sbjct: 437 CGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM-IDAGIAPDEITFIG 495
Query: 210 TLTACAALRNAEVGKEIHS 228
L+AC + G++ S
Sbjct: 496 LLSACCHGGMIQTGRDYFS 514
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 103/184 (55%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
S GD A +F + S+ +Y MI +A++G A+ LF+++ E+G+ PD YT
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVT 401
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
VL + +G++VH ++ ++ L FD +V N+LMDMYA+ G + + + +F E +
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
D +SWN +I G + EA+ F + E + P+E TV L ACA+L + G+EI
Sbjct: 462 DIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Query: 227 HSYI 230
H YI
Sbjct: 522 HGYI 525
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 121/228 (53%), Gaps = 6/228 (2%)
Query: 4 TCISLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+L+ C KS+ + K++ I +G D + +KL + T+ GD A R+FD
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNC--GDLKEASRVFD 153
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++ +N+++ AK G F +I LF+++ GV D+YT+ V K+ L V
Sbjct: 154 EVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHG 213
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G ++H F++KSG V NSL+ Y + R+ +++F+E +RD +SWN +I+G V
Sbjct: 214 GEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVS 273
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
++ + F +M + E + AT+VS CA R +G+ +HS
Sbjct: 274 NGLAEKGLSVFVQMLVSGIE-IDLATIVSVFAGCADSRLISLGRAVHS 320
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 4/228 (1%)
Query: 4 TCIS-LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
+C+S S +S+ +Q+ I SG + N L+A + D A ++FD +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD--SARKVFDEM 256
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
+ + ++N +I + G + +S+F Q+ G+ D T V + GR
Sbjct: 257 TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGR 316
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
VH+ +K+ + CN+L+DMY++ G L K +F E DR VS+ MI+G R
Sbjct: 317 AVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA++ F+ M E P+ TV + L CA R + GK +H +I
Sbjct: 377 LAGEAVKLFEEME-EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 2/167 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVW-PDNYTYPYV 108
G A +F ++ + ++N +I ++K A+SLF L E+ + PD T V
Sbjct: 446 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
L A L +GR++H +++++G D +V NSL+DMYA+ G L LF++ +D
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDL 565
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
VSW +MI+G +EAI F +MR E +E + VS L AC+
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIE-ADEISFVSLLYACS 611
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 15/184 (8%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +L +C S+ ++I I +G DR N L + + G A +FD
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSL--VDMYAKCGALLLAHMLFD 558
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I L ++ VMI + G + AI+LF Q+R+ G+ D ++ +L A G V +
Sbjct: 559 DIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE 618
Query: 121 GRKV-----HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIM 174
G + H I+ +E Y C ++DM A G L E P D W +
Sbjct: 619 GWRFFNIMRHECKIEPTVEH--YAC--IVDMLARTGDLIKAYRFIENMPIPPDATIWGAL 674
Query: 175 ISGC 178
+ GC
Sbjct: 675 LCGC 678
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 124 bits (311), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 121/222 (54%), Gaps = 4/222 (1%)
Query: 9 LKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP-SL 67
L S ++ EL++I AL+ GL KL I S + +L +F + ++
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKL--IDKYSHFREPASSLSVFRRVSPAKNV 71
Query: 68 FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAF 127
+ +N +I+AF+K G F A+ + +LRE V PD YT+P V+KA L D G V+
Sbjct: 72 YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQ 131
Query: 128 VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEA 187
++ G E D +V N+L+DMY+ +G L+ +++F+E P RD VSWN +ISG ++EA
Sbjct: 132 ILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEA 191
Query: 188 IEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+E + ++ S P+ TV S L A L + G+ +H +
Sbjct: 192 LEIYHELK-NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGF 232
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 115/227 (50%), Gaps = 6/227 (2%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+L++C + +L K I + +G + N L I + GD A +F+
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL--IDVYAKCGDMITARDVFN 366
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++ ++N +I + + G A+ LF+ + D+ TY ++ L D+
Sbjct: 367 SMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKF 426
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+ +H+ IKSG+ D V N+L+DMYA+ G + D ++F D V+WN +IS CVR
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
F ++ +MR +S+ P+ AT + TL CA+L +GKEIH
Sbjct: 487 FGDFATGLQVTTQMR-KSEVVPDMATFLVTLPMCASLAAKRLGKEIH 532
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 125/234 (53%), Gaps = 11/234 (4%)
Query: 2 KGTCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
K T S++K+C + + + + I G + D N L + S +G A ++
Sbjct: 106 KYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNAL--VDMYSRMGLLTRARQV 163
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
FD + L ++N +I ++ G + A+ ++ +L+ + PD++T VL A G L V
Sbjct: 164 FDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV 223
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
QG+ +H F +KSG+ V N L+ MY + R +D + +F+E RD+VS+N MI G
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 179 VRCKRFQEAIEFFQRMRMESKE--KPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++ + +E++ RM +E+ + KP+ TV S L AC LR+ + K I++Y+
Sbjct: 284 LKLEMVEESV----RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 92/174 (52%), Gaps = 2/174 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A R+FD + +YN MI + K ++ +F + D PD T VL+A G
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGH 319
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
L D+ + ++ +++K+G ++ V N L+D+YA+ G + +++F +D VSWN +
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
ISG ++ EA++ F +M M +E+ + T + ++ L + + GK +HS
Sbjct: 380 ISGYIQSGDLMEAMKLF-KMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHS 432
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 3/188 (1%)
Query: 28 SGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAI 87
SG+ D N L I + G+ +L+IF + +N +I A + G F +
Sbjct: 437 SGICIDLSVSNAL--IDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 88 SLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMY 147
+ Q+R+ V PD T+ L L G+++H +++ G E + + N+L++MY
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 148 AELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATV 207
++ G L + +FE RD V+W MI ++A+E F M +S P+
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADME-KSGIVPDSVVF 613
Query: 208 VSTLTACA 215
++ + AC+
Sbjct: 614 IAIIYACS 621
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 68/126 (53%), Gaps = 2/126 (1%)
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE-TP 164
P++ +A+ ++ + R++HA VI GL+ + L+D Y+ + +F +P
Sbjct: 8 PFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP 67
Query: 165 DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
++ WN +I + F EA+EF+ ++R ESK P++ T S + ACA L +AE+G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLR-ESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 225 EIHSYI 230
++ I
Sbjct: 127 LVYEQI 132
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 122 bits (307), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 116/228 (50%), Gaps = 2/228 (0%)
Query: 5 CISLLKSCKSMCELKQIQA-LIFCSGLQQDRDTLNKLMAISTDSSI-GDFHYALRIFDHI 62
C+ LLK C ++ E KQ+ A I S + + ++A S +YA IF I
Sbjct: 33 CLYLLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGI 92
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
P F++N MI+ + SF A+ + ++ + G PDN+TYP +LKA L + +G+
Sbjct: 93 DDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGK 152
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
++H V K GLE D +V NSL++MY G + +FE+ + SW+ M+S
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ E + F+ M E+ K E+ +VS L ACA +G IH ++
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFL 260
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 103/212 (48%), Gaps = 7/212 (3%)
Query: 8 LLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
LLK+C KS+ E KQI +F GL+ D N L I+ G+ + +F+ ++
Sbjct: 138 LLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSL--INMYGRCGEMELSSAVFEKLES 195
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ +++ M+ A A G + + LF+ + E + + L A G + G
Sbjct: 196 KTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMS 255
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H F++++ E + V SL+DMY + G L +F++ R+N++++ MISG
Sbjct: 256 IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGE 315
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ A+ F +M E E P+ VS L AC+
Sbjct: 316 GESALRMFSKMIKEGLE-PDHVVYVSVLNACS 346
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
AL IF +++ + Y+ MI A G A+ +F ++ ++G+ PD+ Y VL A
Sbjct: 288 ALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSH 347
Query: 115 LGDVGQGRKVHAFVIKSG-LEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWN 172
G V +GR+V A ++K G +E A L+D+ G L + E + P ++++V W
Sbjct: 348 SGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWR 407
Query: 173 IMISGCVRCKRFQEAIEFFQRMRME----SKEKPNEATVVSTL 211
+S C R ++ IE Q E S P + ++S L
Sbjct: 408 TFLSQC----RVRQNIELGQIAAQELLKLSSHNPGDYLLISNL 446
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 129/229 (56%), Gaps = 11/229 (4%)
Query: 7 SLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SLL++C S+ + + LI L+ + +KL+ + +S G A +FD +
Sbjct: 97 SLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLY--ASCGYAEVAHEVFDRMS 154
Query: 64 Q--PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+ S F +N +I +A+ G + A++L+ Q+ EDGV PD +T+P VLKA G +G V G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
+H ++K G +D YV N+L+ MYA+ G + + +F+ P +D VSWN M++G +
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA++ F R+ +++ +P++ + S L + ++ G+++H ++
Sbjct: 275 GLLHEALDIF-RLMVQNGIEPDKVAISSVLARVLSFKH---GRQLHGWV 319
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 114/228 (50%), Gaps = 12/228 (5%)
Query: 4 TCISLLKSCKSMCELKQIQAL---IFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +LK+C + ++ +A+ + G D LN L+ + + GD A +FD
Sbjct: 197 TFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMY--AKCGDIVKARNVFD 254
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I ++N M+ + G A+ +F+ + ++G+ PD VL +
Sbjct: 255 MIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFK---H 311
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
GR++H +VI+ G+E++ V N+L+ +Y++ G+L +F++ +RD VSWN +IS
Sbjct: 312 GRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA--- 368
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+ +++F++M + KP+ T VS L+ CA E G+ + S
Sbjct: 369 HSKNSNGLKYFEQMH-RANAKPDGITFVSVLSLCANTGMVEDGERLFS 415
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 131/261 (50%), Gaps = 38/261 (14%)
Query: 7 SLLKSCKSMCELK---QIQALIFCSGLQQDRDTLN-------KLMAISTDSSIGDFHYAL 56
S+LKSC M +L+ + I G+ D T N KL+ + + S+G+ +
Sbjct: 110 SVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEM 169
Query: 57 ---------------------------RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISL 89
R+F+ + + + +YN +I +A+ G + A+ +
Sbjct: 170 PQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRM 229
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
+++ + PD++T VL DV +G+++H +VI+ G++ D Y+ +SL+DMYA+
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
R+ D + +F RD +SWN +++G V+ R+ EA+ F++M + +K KP S
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSS 348
Query: 210 TLTACAALRNAEVGKEIHSYI 230
+ ACA L +GK++H Y+
Sbjct: 349 VIPACAHLATLHLGKQLHGYV 369
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 37/208 (17%)
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
F ++ P + + +I+ F + F +A++ F ++R G PD+ +P VLK+ + D+
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAEL---------GRLSD-------------- 155
G VH F+++ G++ D Y N+LM+MYA+L G + D
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 156 -------------FKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKP 202
+ +FE P +D VS+N +I+G + +++A+ + M + KP
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG-TTDLKP 240
Query: 203 NEATVVSTLTACAALRNAEVGKEIHSYI 230
+ T+ S L + + GKEIH Y+
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYV 268
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 5/198 (2%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSS-IGDFHYALRIFDHIQQPSLFNYNVMIKAF 77
K+I + G+ D + L+ + S+ I D + R+F + ++N ++ +
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIED---SERVFSRLYCRDGISWNSLVAGY 318
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
+ G + A+ LF+Q+ V P + V+ A L + G+++H +V++ G +
Sbjct: 319 VQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
++ ++L+DMY++ G + +++F+ D VSW +I G EA+ F+ M+ +
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 198 SKEKPNEATVVSTLTACA 215
KPN+ V+ LTAC+
Sbjct: 439 GV-KPNQVAFVAVLTACS 455
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 113/224 (50%), Gaps = 3/224 (1%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
+L+ ++ LKQI + L D +N L+ + + Y L F H Q P+
Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLL--FSHTQFPN 75
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
+F YN +I F F + LF +R+ G++ +T+P VLKA G +H+
Sbjct: 76 IFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHS 135
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
V+K G D SL+ +Y+ GRL+D +LF+E PDR V+W + SG R +E
Sbjct: 136 LVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHRE 195
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
AI+ F++M +E KP+ +V L+AC + + + G+ I Y+
Sbjct: 196 AIDLFKKM-VEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 118/220 (53%), Gaps = 6/220 (2%)
Query: 8 LLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
+LK+C K + +L+ G D + L++I + S G + A ++FD I
Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGS--GRLNDAHKLFDEIPD 174
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
S+ + + + G R AI LF+++ E GV PD+Y VL A +GD+ G +
Sbjct: 175 RSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWI 234
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
++ + ++ +++V +L+++YA+ G++ + +F+ ++D V+W+ MI G
Sbjct: 235 VKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFP 294
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
+E IE F +M ++ KP++ ++V L++CA+L ++G+
Sbjct: 295 KEGIELFLQM-LQENLKPDQFSIVGFLSSCASLGALDLGE 333
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/211 (19%), Positives = 99/211 (46%), Gaps = 2/211 (0%)
Query: 6 ISLLKSCKSMCELKQIQALI-FCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
+ +L +C + +L + ++ + ++ +++ + ++ + G A +FD + +
Sbjct: 216 VQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVE 275
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
+ ++ MI+ +A + I LF Q+ ++ + PD ++ L + LG + G
Sbjct: 276 KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWG 335
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
+ + + + ++ N+L+DMYA+ G ++ E+F+E ++D V N ISG +
Sbjct: 336 ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHV 395
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ + F + + P+ +T + L C
Sbjct: 396 KLSFAVFGQTE-KLGISPDGSTFLGLLCGCV 425
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 29/200 (14%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMA---ISTDSSIGDFHYALRIFD 60
+ + L SC S+ L + I S + + N MA I + G +F
Sbjct: 315 SIVGFLSSCASLGALDLGEWGI--SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFK 372
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+++ + N I AK G + + ++F Q + G+ PD T+ +L GC
Sbjct: 373 EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLL--CGC------ 424
Query: 121 GRKVHAFVIKSGLE-FDAYVC-----------NSLMDMYAELGRLSDFKELFEETPDRDN 168
VHA +I+ GL F+A C ++D++ G L D L + P R N
Sbjct: 425 ---VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPN 481
Query: 169 -VSWNIMISGCVRCKRFQEA 187
+ W ++SGC K Q A
Sbjct: 482 AIVWGALLSGCRLVKDTQLA 501
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 127/254 (50%), Gaps = 35/254 (13%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
L++C + +LKQI I L D+ + +L+++S SS G+ YA +F+ +Q PS
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVS--SSFGETQYASLVFNQLQSPST 83
Query: 68 FNYNVMIKAFAKKGSFRRAISLF-QQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
F +N+MI++ + R A+ LF + D +T+P+V+KA + G +VH
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHG 143
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD--------------------- 165
IK+G D + N+LMD+Y + G+ +++F++ P
Sbjct: 144 LAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDS 203
Query: 166 ----------RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
R+ VSW MI+ V+ +R EA + F+RM+++ KPNE T+V+ L A
Sbjct: 204 AEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDV-KPNEFTIVNLLQAST 262
Query: 216 ALRNAEVGKEIHSY 229
L + +G+ +H Y
Sbjct: 263 QLGSLSMGRWVHDY 276
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+F+ + ++ ++ MI A+ K A LF++++ D V P+ +T +L+A LG
Sbjct: 207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGS 266
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS- 176
+ GR VH + K+G D ++ +L+DMY++ G L D +++F+ + +WN MI+
Sbjct: 267 LSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITS 326
Query: 177 -GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
G C +EA+ F+ M E+ +P+ T V L+ACA N + G
Sbjct: 327 LGVHGCG--EEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 122/229 (53%), Gaps = 3/229 (1%)
Query: 2 KGTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH 61
K C+ LK C S+ L QI I S LQ D +++L+ +S+ S D +A + H
Sbjct: 13 KHQCLIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLH 72
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+ +N++ + ++ S +I ++ +++ G+ P+ T+P++LKA + G
Sbjct: 73 SSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAG 132
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
R++ V+K G +FD YV N+L+ +Y + SD +++F+E +R+ VSWN +++ V
Sbjct: 133 RQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ E F M + + P+E T+V L+AC N +GK +HS +
Sbjct: 193 GKLNLVFECFCEM-IGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQV 238
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 9/212 (4%)
Query: 8 LLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAI-STDSSIGDFHYALRIFDHIQ 63
LLK+C S L +QIQ + G D N L+ + T D A ++FD +
Sbjct: 119 LLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSD---ARKVFDEMT 175
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ ++ ++N ++ A + G F ++ PD T +L A C G++ G+
Sbjct: 176 ERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSA--CGGNLSLGKL 233
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VH+ V+ LE + + +L+DMYA+ G L + +FE D++ +W+ MI G +
Sbjct: 234 VHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGF 293
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+EA++ F +M ES +PN T + L AC+
Sbjct: 294 AEEALQLFSKMMKESSVRPNYVTFLGVLCACS 325
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 116/212 (54%), Gaps = 4/212 (1%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
Q A I GL D N L IS SS G F +A R+FD + + + MI F +
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSL--ISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR 181
Query: 80 KGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSG-LEFDAY 138
GS A+ F ++++ GV + T VLKA G + DV GR VH +++G ++ D +
Sbjct: 182 NGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF 241
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ +SL+DMY + D +++F+E P R+ V+W +I+G V+ + F + + F+ M ++S
Sbjct: 242 IGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEM-LKS 300
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
PNE T+ S L+ACA + G+ +H Y+
Sbjct: 301 DVAPNEKTLSSVLSACAHVGALHRGRRVHCYM 332
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 5/214 (2%)
Query: 17 ELKQIQALIFCSGL-QQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIK 75
LKQI L+ S + RD + ++ F YA R+ +Q S+ ++ +I
Sbjct: 16 HLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIG 75
Query: 76 AFAKKGSFRRAISL--FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL 133
F+ + R +S ++ +R +GV P +T+P +LKA+ L D + HA ++K GL
Sbjct: 76 HFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGL 134
Query: 134 EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQR 193
+ D +V NSL+ Y+ G LF+ D+D V+W MI G VR EA+ +F
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVE 194
Query: 194 MRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
M+ ++ NE TVVS L A + + G+ +H
Sbjct: 195 MK-KTGVAANEMTVVSVLKAAGKVEDVRFGRSVH 227
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 91/172 (52%), Gaps = 1/172 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD + ++ + +I + + F + + +F+++ + V P+ T VL A
Sbjct: 259 AQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAH 318
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+G + +GR+VH ++IK+ +E + +L+D+Y + G L + +FE +++ +W M
Sbjct: 319 VGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAM 378
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
I+G ++A + F M + S PNE T ++ L+ACA E G+ +
Sbjct: 379 INGFAAHGYARDAFDLFYTM-LSSHVSPNEVTFMAVLSACAHGGLVEEGRRL 429
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 120 bits (301), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 125/232 (53%), Gaps = 14/232 (6%)
Query: 4 TCISLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF- 59
T S++ +C +CE Q+ A +F SG D L+++ + S GD + ++F
Sbjct: 353 TVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKS--GDIDLSEQVFE 410
Query: 60 --DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
D IQ+ ++ N VMI +F++ +AI LF ++ ++G+ D ++ +L + CL
Sbjct: 411 DLDDIQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLN- 467
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
G++VH + +KSGL D V +SL +Y++ G L + +LF+ P +DN W MISG
Sbjct: 468 --LGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+EAI F M ++ P+E+T+ + LT C++ + GKEIH Y
Sbjct: 526 FNEYGYLREAIGLFSEM-LDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGY 576
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Query: 52 FHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA 111
F A ++F +++ +N +I + ++ LF ++ PD+YTY VL A
Sbjct: 201 FEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA 260
Query: 112 IGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
L + G+ V A VIK G E D +VC +++D+YA+ G +++ E+F P+ VSW
Sbjct: 261 CASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+M+SG + A+E F+ MR S + N TV S ++AC ++H+++
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPSMVCEASQVHAWV 377
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 13/228 (5%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S+L +C S+ +L K +QA + G + D + + G A+ +F I
Sbjct: 256 SVLAACASLEKLRFGKVVQARVIKCGAE---DVFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
PS+ ++ VM+ + K A+ +F+++R GV +N T V+ A G V + +
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ 372
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD--RDNVSWNIMISGCVRC 181
VHA+V KSG D+ V +L+ MY++ G + +++FE+ D R N+ N+MI+ +
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQS 431
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
K+ +AI F RM E + +E +V S L+ L +GK++H Y
Sbjct: 432 KKPGKAIRLFTRMLQEGL-RTDEFSVCSLLSVLDCLN---LGKQVHGY 475
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
KQ+ SGL D + L + S G + ++F I + MI F
Sbjct: 470 KQVHGYTLKSGLVLDLTVGSSLFTLY--SKCGSLEESYKLFQGIPFKDNACWASMISGFN 527
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G R AI LF ++ +DG PD T VL + +G+++H + +++G++
Sbjct: 528 EYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD 587
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ ++L++MY++ G L +++++ P+ D VS + +ISG + Q+ F+ M M S
Sbjct: 588 LGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM-S 646
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ + S L A A + +G ++H+YI
Sbjct: 647 GFTMDSFAISSILKAAALSDESSLGAQVHAYI 678
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 105/217 (48%), Gaps = 6/217 (2%)
Query: 2 KGTCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
+ T ++L C S L K+I +G+ + D + L ++ S G A ++
Sbjct: 551 ESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSAL--VNMYSKCGSLKLARQV 608
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
+D + + + + +I +++ G + LF+ + G D++ +LKA +
Sbjct: 609 YDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDES 668
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
G +VHA++ K GL + V +SL+ MY++ G + D + F + D ++W +I+
Sbjct: 669 SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASY 728
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ + EA++ + M+ E KP++ T V L+AC+
Sbjct: 729 AQHGKANEALQVYNLMK-EKGFKPDKVTFVGVLSACS 764
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
+S S+ G A ++FD I QP + + N+MI + + F ++ F ++ G +
Sbjct: 91 LSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANE 150
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
+Y V+ A L V IK G F V ++L+D++++ R D ++F +
Sbjct: 151 ISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRD 210
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
+ + WN +I+G +R + + + F M + +KP+ T S L ACA+L
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCV-GFQKPDSYTYSSVLAACASLEKLRF 269
Query: 223 GKEIHSYI 230
GK + + +
Sbjct: 270 GKVVQARV 277
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 133 LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
L FD ++ SL+ Y+ G ++D +LF+ P D VS NIMISG + + F+E++ FF
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 193 RMRMESKEKPNEATVVSTLTACAALR 218
+M E NE + S ++AC+AL+
Sbjct: 140 KMHFLGFEA-NEISYGSVISACSALQ 164
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 120 bits (301), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 123/249 (49%), Gaps = 39/249 (15%)
Query: 18 LKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAF 77
LKQ + +GL +RD LN I S+ G YA +F H P+ + +N MI+A
Sbjct: 31 LKQSHCYMIITGL--NRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRAL 88
Query: 78 A---KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLE 134
+ + + AI+++++L PD +T+P+VLK + DV GR++H V+ G +
Sbjct: 89 SLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFD 148
Query: 135 FDAYVCNSLMDMYAELGRLSDFKELFEETPDRD--------------------------- 167
+V L+ MY G L D +++F+E +D
Sbjct: 149 SSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMM 208
Query: 168 ------NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAE 221
VSW +ISG + R EAIE FQRM ME+ E P+E T+++ L+ACA L + E
Sbjct: 209 PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVE-PDEVTLLAVLSACADLGSLE 267
Query: 222 VGKEIHSYI 230
+G+ I SY+
Sbjct: 268 LGERICSYV 276
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 88/158 (55%), Gaps = 1/158 (0%)
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFV 128
++ +I +AK G AI +FQ++ + V PD T VL A LG + G ++ ++V
Sbjct: 217 SWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYV 276
Query: 129 IKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAI 188
G+ + N+++DMYA+ G ++ ++FE +R+ V+W +I+G EA+
Sbjct: 277 DHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEAL 336
Query: 189 EFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
F RM +++ +PN+ T ++ L+AC+ + ++GK +
Sbjct: 337 AMFNRM-VKAGVRPNDVTFIAILSACSHVGWVDLGKRL 373
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 120/226 (53%), Gaps = 2/226 (0%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
IS+L CK+ + KQ+ + G+ + KL G YA ++F I +P
Sbjct: 38 ISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEP 97
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD-VGQGRKV 124
+ +N MIK ++K + L+ + ++GV PD++T+P++L + G + G+K+
Sbjct: 98 DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKL 157
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H V+K GL + YV N+L+ MY+ G + + +F+ D SWN+MISG R K +
Sbjct: 158 HCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEY 217
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+E+IE M + P T++ L+AC+ +++ ++ K +H Y+
Sbjct: 218 EESIELLVEME-RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYV 262
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 32/212 (15%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A +FD + +F++N+MI + + + +I L ++ + V P + T VL
Sbjct: 184 GLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVL 243
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA--------------------- 148
A + D ++VH +V + E + N+L++ YA
Sbjct: 244 SACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVI 303
Query: 149 ----------ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
E G L + F++ P RD +SW IMI G +R F E++E F+ M+ +
Sbjct: 304 SWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQ-SA 362
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
P+E T+VS LTACA L + E+G+ I +YI
Sbjct: 363 GMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 101/206 (49%), Gaps = 3/206 (1%)
Query: 9 LKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLF 68
L + + C I IF S + RD ++ + G+ A FD +
Sbjct: 277 LVNAYAACGEMDIAVRIFRS--MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFV 128
++ +MI + + G F ++ +F++++ G+ PD +T VL A LG + G + ++
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 129 IKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAI 188
K+ ++ D V N+L+DMY + G +++F + RD +W M+ G + QEAI
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 454
Query: 189 EFFQRMRMESKEKPNEATVVSTLTAC 214
+ F +M+ + +P++ T + L+AC
Sbjct: 455 KVFFQMQ-DMSIQPDDITYLGVLSAC 479
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 12/214 (5%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +S+L +C + L+ I+ I + ++ D N L I G A ++F
Sbjct: 370 TMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNAL--IDMYFKCGCSEKAQKVFH 427
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ Q F + M+ A G + AI +F Q+++ + PD+ TY VL A G V Q
Sbjct: 428 DMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQ 487
Query: 121 GRKVHAFVIKSGLEFDAYVCN--SLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISG 177
RK A ++S + + + ++DM G + + E+ + P + +++ W ++ G
Sbjct: 488 ARKFFA-KMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL-G 545
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
R + E + +E +P+ V + L
Sbjct: 546 ASRLHNDEPMAELAAKKILEL--EPDNGAVYALL 577
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD + + ++ +++ ++ G + ++SLF ++ G++P+ +T+ LKA G
Sbjct: 60 AYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL 119
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
L + +G ++H F +K G E V NSL+DMY++ GR+++ +++F DR +SWN M
Sbjct: 120 LNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 175 ISGCVRCKRFQEAIEFFQRMRMES-KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
I+G V +A++ F M+ + KE+P+E T+ S L AC++ GK+IH ++
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 4/228 (1%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T SLLK+C S + KQI + SG + G A + FD
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFD 271
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I++ ++ +++ +I +A++G F A+ LF++L+E D++ ++ + Q
Sbjct: 272 QIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 331
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+++ A +K + V NS++DMY + G + + ++ F E +D +SW ++I+G +
Sbjct: 332 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 391
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
++++ F M + E P+E ++ L+AC+ + G+E+ S
Sbjct: 392 HGLGKKSVRIFYEMLRHNIE-PDEVCYLAVLSACSHSGMIKEGEELFS 438
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 9/194 (4%)
Query: 9 LKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
LK+C + L+ QI G + + N L + S G + A ++F I
Sbjct: 114 LKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSL--VDMYSKCGRINEAEKVFRRIVDR 171
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGV--WPDNYTYPYVLKAIGCLGDVGQGRK 123
SL ++N MI F G +A+ F ++E + PD +T +LKA G + G++
Sbjct: 172 SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQ 231
Query: 124 VHAFVIKSGLE--FDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
+H F+++SG A + SL+D+Y + G L ++ F++ ++ +SW+ +I G +
Sbjct: 232 IHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQE 291
Query: 182 KRFQEAIEFFQRMR 195
F EA+ F+R++
Sbjct: 292 GEFVEAMGLFKRLQ 305
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
QG +VH +++KSG + N L+DMY + ++F+ P+R+ VSW+ ++SG V
Sbjct: 24 QGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHV 83
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+ ++ F M + PNE T + L AC L E G +IH +
Sbjct: 84 LNGDLKGSLSLFSEMGRQGI-YPNEFTFSTNLKACGLLNALEKGLQIHGF 132
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 121/228 (53%), Gaps = 3/228 (1%)
Query: 2 KGTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH 61
K T + K S+ L Q A I G + D L KL +D +G +YA IF
Sbjct: 20 KNTYLDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSD--LGAIYYARDIFLS 77
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG-VWPDNYTYPYVLKAIGCLGDVGQ 120
+Q+P +F +NV+++ F+ S ++S+F LR+ + P++ TY + + A D
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
GR +H + G + + + ++++ MY + R+ D +++F+ P++D + WN MISG +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+ + E+I+ F+ + ES + + T++ L A A L+ +G +IHS
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 92/180 (51%), Gaps = 1/180 (0%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
S + + A ++FD + SL ++N MI + + G AISLF+++++ P+ T
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
+L A LG + G+ VH V + E YV +L+ MYA+ G +++ + LF+ +
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKK 484
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ V+WN MISG + QEA+ F M + S P T + L AC+ + G EI
Sbjct: 485 NEVTWNTMISGYGLHGQGQEALNIFYEM-LNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Score = 92.8 bits (229), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 109/230 (47%), Gaps = 9/230 (3%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T + +L + + EL+ QI +L +G L IS S G +F
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGF--ISLYSKCGKIKMGSALFR 280
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++P + YN MI + G ++SLF++L G + T ++ G L +
Sbjct: 281 EFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI-- 338
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
+H + +KS A V +L +Y++L + ++LF+E+P++ SWN MISG +
Sbjct: 339 -YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++AI F+ M+ +S+ PN T+ L+ACA L +GK +H +
Sbjct: 398 NGLTEDAISLFREMQ-KSEFSPNPVTITCILSACAQLGALSLGKWVHDLV 446
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 75/164 (45%), Gaps = 2/164 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIG 113
A ++FD + + +N MI + K + +I +F+ L E D T +L A+
Sbjct: 173 ARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
L ++ G ++H+ K+G YV + +Y++ G++ LF E D V++N
Sbjct: 233 ELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNA 292
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAAL 217
MI G + ++ F+ + M S + +T+VS + L
Sbjct: 293 MIHGYTSNGETELSLSLFKEL-MLSGARLRSSTLVSLVPVSGHL 335
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 118 bits (296), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 108/210 (51%), Gaps = 3/210 (1%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
Q+Q+ + SG DRD + I G+ YA +FD + + S + MI K
Sbjct: 169 QLQSFLVKSGF--DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 80 KGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYV 139
G ++ LF QL ED V PD Y VL A L + G+++HA +++ GLE DA +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 140 CNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESK 199
N L+D Y + GR+ +LF P+++ +SW ++SG + +EA+E F M +
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMS-KFG 345
Query: 200 EKPNEATVVSTLTACAALRNAEVGKEIHSY 229
KP+ S LT+CA+L G ++H+Y
Sbjct: 346 LKPDMYACSSILTSCASLHALGFGTQVHAY 375
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 113/219 (51%), Gaps = 14/219 (6%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALR--- 57
T +SLL++ S+ L KQI L+F GL D + L+ + ++ Y L+
Sbjct: 456 TFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNC------YCLKDSR 509
Query: 58 -IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG 116
+FD ++ L +N M + ++ A++LF +L+ PD +T+ ++ A G L
Sbjct: 510 LVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLA 569
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
V G++ H ++K GLE + Y+ N+L+DMYA+ G D + F+ RD V WN +IS
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
++A++ ++M E E PN T V L+AC+
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIE-PNYITFVGVLSACS 667
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 110/212 (51%), Gaps = 6/212 (2%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
KQI A I GL+ D +N L I + G A ++F+ + ++ ++ ++ +
Sbjct: 269 KQIHAHILRYGLEMDASLMNVL--IDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYK 326
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ + A+ LF + + G+ PD Y +L + L +G G +VHA+ IK+ L D+Y
Sbjct: 327 QNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK---RFQEAIEFFQRMR 195
V NSL+DMYA+ L+D +++F+ D V +N MI G R EA+ F+ MR
Sbjct: 387 VTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 196 MESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+P+ T VS L A A+L + + K+IH
Sbjct: 447 FRLI-RPSLLTFVSLLRASASLTSLGLSKQIH 477
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 119/231 (51%), Gaps = 11/231 (4%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSS-IGDFHYALRIF 59
C S+L SC S+ L Q+ A + L D N L+ + + D A ++F
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTD---ARKVF 408
Query: 60 DHIQQPSLFNYNVMIKAFAKKGS---FRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG 116
D + +N MI+ +++ G+ A+++F+ +R + P T+ +L+A L
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
+G +++H + K GL D + ++L+D+Y+ L D + +F+E +D V WN M +
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
G V+ +EA+ F +++ S+E+P+E T + +TA L + ++G+E H
Sbjct: 529 GYVQQSENEEALNLFLELQL-SRERPDEFTFANMVTAAGNLASVQLGQEFH 578
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 115/217 (52%), Gaps = 14/217 (6%)
Query: 21 IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKK 80
+ I GL+ D N L I+ S G YA ++F+ + + +L +++ M+ A
Sbjct: 66 VHGQIIVWGLELDTYLSNIL--INLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHH 123
Query: 81 GSFRRAISLFQQL---REDGVWPDNYTYPYVLKAIGCLGDVGQGR----KVHAFVIKSGL 133
G + ++ +F + R+D P+ Y ++A C G G+GR ++ +F++KSG
Sbjct: 124 GIYEESLVVFLEFWRTRKDS--PNEYILSSFIQA--CSGLDGRGRWMVFQLQSFLVKSGF 179
Query: 134 EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQR 193
+ D YV L+D Y + G + + +F+ P++ V+W MISGCV+ R +++ F +
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 194 MRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ ME P+ + + L+AC+ L E GK+IH++I
Sbjct: 240 L-MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHI 275
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A + FD + +N +I ++A G ++A+ + +++ +G+ P+ T+ VL A
Sbjct: 609 AHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 115 LGDVGQGRKVHAFVIKSGLEFDA--YVCNSLMDMYAELGRLSDFKELFEETPDRD-NVSW 171
G V G K +++ G+E + YVC ++ + GRL+ +EL E+ P + + W
Sbjct: 669 AGLVEDGLKQFELMLRFGIEPETEHYVC--MVSLLGRAGRLNKARELIEKMPTKPAAIVW 726
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAAL 217
++SGC + + A + + + T++S + A +
Sbjct: 727 RSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGM 772
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 130/288 (45%), Gaps = 63/288 (21%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAIS-TDSSIGDFHYALRIFDHIQQ 64
+S + KS+ E++Q A + +GL D + +KL+A + T+ YA I + I
Sbjct: 43 LSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGS 102
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P+ F +N +I+A+A + A+++F+++ V+PD Y++ +VLKA +GR++
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW------------- 171
H IKSGL D +V N+L+++Y G +++ + P RD VSW
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 172 ------------------NIMISGCVRCKRFQEAIEFFQRMRM----------------- 196
N MISG +EA E F M +
Sbjct: 223 DEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVG 282
Query: 197 --------------ESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+S EKP+ T+VS L+ACA+L + G+ +H YI
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYI 330
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 96/184 (52%), Gaps = 2/184 (1%)
Query: 32 QDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQ 91
++R+ + IS ++ G A +FD + + ++N M+ A+A G + + +F
Sbjct: 233 EERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFN 292
Query: 92 QLREDGVW-PDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAEL 150
++ +D PD +T VL A LG + QG VH ++ K G+E + ++ +L+DMY++
Sbjct: 293 KMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKC 352
Query: 151 GRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVST 210
G++ E+F T RD +WN +IS ++A+E F M E KPN T +
Sbjct: 353 GKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF-KPNGITFIGV 411
Query: 211 LTAC 214
L+AC
Sbjct: 412 LSAC 415
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 117 bits (294), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 117/222 (52%), Gaps = 7/222 (3%)
Query: 14 SMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVM 73
S+ + ++ I +G QD KL+ + +D +G YA ++FD ++ +++ +N +
Sbjct: 92 SLSDALRVHRHILDNGSDQDPFLATKLIGMYSD--LGSVDYARKVFDKTRKRTIYVWNAL 149
Query: 74 IKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC----LGDVGQGRKVHAFVI 129
+A G + L+ ++ GV D +TY YVLKA + + +G+++HA +
Sbjct: 150 FRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLT 209
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIE 189
+ G Y+ +L+DMYA G + +F P R+ VSW+ MI+ + + EA+
Sbjct: 210 RRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALR 269
Query: 190 FFQRMRMESKE-KPNEATVVSTLTACAALRNAEVGKEIHSYI 230
F+ M E+K+ PN T+VS L ACA+L E GK IH YI
Sbjct: 270 TFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYI 311
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 91/175 (52%), Gaps = 3/175 (1%)
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG--VWPDNYTYPYVLKA 111
YA +F + ++ +++ MI +AK G A+ F+++ + P++ T VL+A
Sbjct: 235 YASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQA 294
Query: 112 IGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
L + QG+ +H ++++ GL+ V ++L+ MY G+L + +F+ DRD VSW
Sbjct: 295 CASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSW 354
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
N +IS ++AI+ F+ M + + P T VS L AC+ E GK +
Sbjct: 355 NSLISSYGVHGYGKKAIQIFEEM-LANGASPTPVTFVSVLGACSHEGLVEEGKRL 408
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 75/164 (45%), Gaps = 9/164 (5%)
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK 130
N +I++ K+G ++AI + Q P TY ++ G + +VH ++
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEF 190
+G + D ++ L+ MY++LG + +++F++T R WN + +E +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 191 FQRMRMESKEKPNEATVVSTLTACAA----LRNAEVGKEIHSYI 230
+ +M E + T L AC A + + GKEIH+++
Sbjct: 166 YWKMNRIGVES-DRFTYTYVLKACVASECTVNHLMKGKEIHAHL 208
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 117 bits (293), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 94/162 (58%), Gaps = 1/162 (0%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
Q ++N +I + K A LF ++ E G+ PD +TY VL L G G++
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+HA VIK L+ D Y+C++L+DMY++ G L D + +FE++ RD V+WN MI G +
Sbjct: 625 IHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGK 684
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
+EAI+ F+RM +E+ KPN T +S L ACA + + G E
Sbjct: 685 GEEAIQLFERMILENI-KPNHVTFISILRACAHMGLIDKGLE 725
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 116/242 (47%), Gaps = 34/242 (14%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI---------------- 62
KQ A + SG + LN L+ + T+S DF A +FD +
Sbjct: 68 KQAHAHMIISGFRPTTFVLNCLLQVYTNSR--DFVSASMVFDKMPLRDVVSWNKMINGYS 125
Query: 63 ------QQPSLFN---------YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPY 107
+ S FN +N M+ + + G ++I +F + +G+ D T+
Sbjct: 126 KSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI 185
Query: 108 VLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
+LK L D G ++H V++ G + D ++L+DMYA+ R + +F+ P+++
Sbjct: 186 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 245
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+VSW+ +I+GCV+ A++FF+ M+ + +++ S L +CAAL +G ++H
Sbjct: 246 SVSWSAIIAGCVQNNLLSLALKFFKEMQ-KVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 228 SY 229
++
Sbjct: 305 AH 306
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 114/239 (47%), Gaps = 26/239 (10%)
Query: 13 KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNV 72
K + E QI L S L D N AI A R+FD +++ ++N
Sbjct: 396 KGLSEGLQIYGLAIKSSLSLDVCVANA--AIDMYGKCQALAEAFRVFDEMRRRDAVSWNA 453
Query: 73 MIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG-DVGQGRKVHAFVIKS 131
+I A + G + LF + + PD +T+ +LKA C G +G G ++H+ ++KS
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA--CTGGSLGYGMEIHSSIVKS 511
Query: 132 GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN--------------------VSW 171
G+ ++ V SL+DMY++ G + + +++ R N VSW
Sbjct: 512 GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSW 571
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
N +ISG V ++ ++A F RM ME P++ T + L CA L +A +GK+IH+ +
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRM-MEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 113/226 (50%), Gaps = 5/226 (2%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQD--RDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
S+L+SC ++ EL+ + + L+ D D + + + + + A +FD+ +
Sbjct: 286 SVLRSCAALSELR-LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSEN 344
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
+ +YN MI ++++ +A+ LF +L G+ D + V +A + + +G ++
Sbjct: 345 LNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQI 404
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
+ IKS L D V N+ +DMY + L++ +F+E RD VSWN +I+ + +
Sbjct: 405 YGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKG 464
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
E + F M + S+ +P+E T S L AC + G EIHS I
Sbjct: 465 YETLFLFVSM-LRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSI 508
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 1/176 (0%)
Query: 52 FHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA 111
F +LR+F I + + +++ +I + A+ F+++++ Y VL++
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 112 IGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
L ++ G ++HA +KS D V + +DMYA+ + D + LF+ + + + S+
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
N MI+G + + +A+ F R+ M S +E ++ ACA ++ G +I+
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRL-MSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 89/184 (48%), Gaps = 9/184 (4%)
Query: 2 KGTCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
K T ++L +C ++ KQI A + LQ D + L + S GD H + +
Sbjct: 603 KFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTL--VDMYSKCGDLHDSRLM 660
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
F+ + +N MI +A G AI LF+++ + + P++ T+ +L+A +G +
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 119 GQGRKVHAFVIKSGLEFDAYVCN--SLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMI 175
+G + + +++K D + + +++D+ + G++ EL E P + D+V W ++
Sbjct: 721 DKGLE-YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLL 779
Query: 176 SGCV 179
C
Sbjct: 780 GVCT 783
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 14/178 (7%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRR--AISLFQQLREDGVWPDNYTYPYVLKAI 112
+LR+ + FN + +K S+RR + S F + +V K
Sbjct: 4 SLRLLHMTRSVVSFN-----RCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKEC 58
Query: 113 GCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWN 172
G + G++ HA +I SG +V N L+ +Y +F++ P RD VSWN
Sbjct: 59 AKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWN 118
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
MI+G + +A FF M P V L+N E K I ++
Sbjct: 119 KMINGYSKSNDMFKANSFFNMM-------PVRDVVSWNSMLSGYLQNGESLKSIEVFV 169
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 73/185 (39%), Gaps = 11/185 (5%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+ F Y + + S N++ + K AK+G+ + G P +
Sbjct: 30 VPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFV---- 85
Query: 109 LKAIGCLGDVGQGRK--VHAFVIKSGLEF-DAYVCNSLMDMYAELGRLSDFKELFEETPD 165
+ CL V + V A ++ + D N +++ Y++ + F P
Sbjct: 86 ---LNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPV 142
Query: 166 RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
RD VSWN M+SG ++ ++IE F M E E T L C+ L + +G +
Sbjct: 143 RDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR-TFAIILKVCSFLEDTSLGMQ 201
Query: 226 IHSYI 230
IH +
Sbjct: 202 IHGIV 206
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 123/256 (48%), Gaps = 38/256 (14%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMA--ISTDSSIGDFHYALRIFDHIQ 63
+ LL + L +I A + L N L+A IS S+ + YA R+F HIQ
Sbjct: 8 LRLLHGHNTRTRLPEIHAHLLRHFLHGS----NLLLAHFISICGSLSNSDYANRVFSHIQ 63
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P++ +N MIK ++ G ++S F ++ G+W D YTY +LK+ L D+ G+
Sbjct: 64 NPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKC 123
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG------ 177
VH +I++G + ++++Y GR+ D +++F+E +R+ V WN+MI G
Sbjct: 124 VHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGD 183
Query: 178 -------------------------CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
+C R +EA+E F M ++ P+EATVV+ L
Sbjct: 184 VERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM-IDQGFDPDEATVVTVLP 242
Query: 213 ACAALRNAEVGKEIHS 228
A+L + GK IHS
Sbjct: 243 ISASLGVLDTGKWIHS 258
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 89/178 (50%), Gaps = 1/178 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD L +F + + S+ ++N MI + +K G R A+ LF ++ + G PD T VL
Sbjct: 182 GDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVL 241
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFD-AYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
LG + G+ +H+ SGL D V N+L+D Y + G L +F + R+
Sbjct: 242 PISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNV 301
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
VSWN +ISG + + I+ F M E K PNEAT + L C+ E G+E+
Sbjct: 302 VSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEEL 359
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 112/210 (53%), Gaps = 1/210 (0%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
KQI A I +G R+ + + + A +F ++ ++F++ +I
Sbjct: 90 KQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKC 149
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G A+ F ++ E+ ++PDN+ P V KA G L GR VH +V+KSGLE +
Sbjct: 150 RIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVF 209
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
V +SL DMY + G L D ++F+E PDR+ V+WN ++ G V+ + +EAI F MR +
Sbjct: 210 VASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQG 269
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHS 228
E P TV + L+A A + E GK+ H+
Sbjct: 270 VE-PTRVTVSTCLSASANMGGVEEGKQSHA 298
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 97/175 (55%), Gaps = 1/175 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD I + +N ++ + + G AI LF +R+ GV P T L A
Sbjct: 227 ASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASAN 286
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+G V +G++ HA I +G+E D + SL++ Y ++G + + +F+ ++D V+WN++
Sbjct: 287 MGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLI 346
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
ISG V+ ++AI Q MR+E K K + T+ + ++A A N ++GKE+ Y
Sbjct: 347 ISGYVQQGLVEDAIYMCQLMRLE-KLKYDCVTLATLMSAAARTENLKLGKEVQCY 400
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 107/219 (48%), Gaps = 5/219 (2%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
TC+S + + E KQ A+ +G++ D L+ +G YA +FD +
Sbjct: 279 TCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC--KVGLIEYAEMVFDRMF 336
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ + +N++I + ++G AI + Q +R + + D T ++ A ++ G++
Sbjct: 337 EKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKE 396
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
V + I+ E D + +++MDMYA+ G + D K++F+ T ++D + WN +++
Sbjct: 397 VQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGL 456
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
EA+ F M++E PN + L + LRN +V
Sbjct: 457 SGEALRLFYGMQLEGV-PPN--VITWNLIILSLLRNGQV 492
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 4/152 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P+L ++ M+ + G AI ++++E G+ P+ ++ L A L + GR +
Sbjct: 509 PNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Query: 125 HAFVIKSGLEFDAYVC--NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
H ++I++ L+ + V SL+DMYA+ G ++ +++F + N MIS
Sbjct: 569 HGYIIRN-LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYG 627
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
+EAI ++ + KP+ T+ + L+AC
Sbjct: 628 NLKEAIALYRSLEGVGL-KPDNITITNVLSAC 658
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 12/172 (6%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD + A ++F L N MI A+A G+ + AI+L++ L G+ PDN T VL
Sbjct: 596 GDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVL 655
Query: 110 KAIGCLGDVGQGRKVHAFVI-----KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
A GD+ Q ++ ++ K LE ++D+ A G L EE P
Sbjct: 656 SACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGL----MVDLLASAGETEKALRLIEEMP 711
Query: 165 DRDNVSW-NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ + +++ C + +R E +++ R +ES E N V+ A A
Sbjct: 712 FKPDARMIQSLVASCNK-QRKTELVDYLSRKLLES-EPENSGNYVTISNAYA 761
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL--REDGVWPDNYTYPYVLKAIGCL-- 115
+ PS +Y + + K G + A+SL ++ R + P+ Y +L+ GC+
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPE--IYGEILQ--GCVYE 83
Query: 116 GDVGQGRKVHAFVIKSGLEFDA---YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWN 172
D+ G+++HA ++K+G +F A Y+ L+ YA+ L + LF + R+ SW
Sbjct: 84 RDLSTGKQIHARILKNG-DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWA 142
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+I R + A+ F M +E++ P+ V + AC AL+ + G+ +H Y+
Sbjct: 143 AIIGVKCRIGLCEGALMGFVEM-LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYV 199
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 120/229 (52%), Gaps = 4/229 (1%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIG-DFHYALRIFDHIQQ 64
+SL+ S L+QI AL+ + L ++ D + ++ S I D +Y+ R+F
Sbjct: 15 LSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLN 74
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN-YTYPYVLKAIGCLGDVGQGRK 123
P+L + N MI+AF+ + LF+ LR + P N + + LK GD+ G +
Sbjct: 75 PTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQ 134
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H + G D+ + +LMD+Y+ +D ++F+E P RD VSWN++ S +R KR
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR 194
Query: 184 FQEAIEFFQRMR--MESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++ + F +M+ ++ KP+ T + L ACA L + GK++H +I
Sbjct: 195 TRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI 243
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 98/200 (49%), Gaps = 8/200 (4%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAI-STDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
QI IF G D + LM + ST + D A ++FD I + ++NV+ +
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTD---ACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 79 KKGSFRRAISLFQQLREDG---VWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEF 135
+ R + LF +++ D V PD T L+A LG + G++VH F+ ++GL
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 136 DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
+ N+L+ MY+ G + ++F +R+ VSW +ISG +EAIE F M
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEM- 309
Query: 196 MESKEKPNEATVVSTLTACA 215
++ P E T+ L+AC+
Sbjct: 310 LKFGISPEEQTLTGLLSACS 329
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 102/177 (57%), Gaps = 1/177 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++F + + SL+ +N ++K+ +++ + + F + D PDN+T P LKA G
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 115 LGDVGQGRKVHAFVIKS-GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
L +V G +H FV K L D YV +SL+ MY + GR+ + +F+E D V+W+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
M+SG + +A+EFF+RM M S P+ T+++ ++AC L N+ +G+ +H ++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFV 189
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 108/230 (46%), Gaps = 5/230 (2%)
Query: 4 TCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T I+L+ +C + + + + G D +N L+ S F A+ +F
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA--FKEAVNLFK 222
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I + + +++ +I + + G+ A+ +F + +DG P+ T VL+A D+ Q
Sbjct: 223 MIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
GRK H I+ GLE + V +L+DMY + + +F P +D VSW +ISG
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+IE F M +E+ +P+ +V L +C+ L E K HSY+
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYV 392
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 2/174 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIG 113
ALR+FD +++P + ++ M+ F K GS +A+ F+++ V PD T ++ A
Sbjct: 115 ALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
L + GR VH FVI+ G D + NSL++ YA+ + LF+ ++D +SW+
Sbjct: 175 KLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWST 234
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+I+ V+ EA+ F M M+ +PN ATV+ L ACAA + E G++ H
Sbjct: 235 VIACYVQNGAAAEALLVFNDM-MDDGTEPNVATVLCVLQACAAAHDLEQGRKTH 287
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 104/217 (47%), Gaps = 6/217 (2%)
Query: 3 GTCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
T + +L++C + +L+Q L GL+ + L+ + + YA +F
Sbjct: 265 ATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYA--VF 322
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQ-QLREDGVWPDNYTYPYVLKAIGCLGDV 118
I + + ++ +I F G R+I F L E+ PD VL + LG +
Sbjct: 323 SRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFL 382
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
Q + H++VIK G + + ++ SL+++Y+ G L + ++F +D V W +I+G
Sbjct: 383 EQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGY 442
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ +A+E F M S+ KPNE T +S L+AC+
Sbjct: 443 GIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS 479
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 6 ISLLKSCKSMCELKQIQAL---IFCSGLQQDRDTLNKLMAISTD-SSIGDFHYALRIFDH 61
++LL+ + E+ Q+Q L G D +N ++ + +GD A +FD
Sbjct: 148 VTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGD---AKDLFDQ 204
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
++Q + ++N MI +A G+ + L ++R DG+ PD T+ L G + D+ G
Sbjct: 205 MEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMG 264
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
R +H ++K+G + D ++ +L+ MY + G+ + E P++D V W +MISG +R
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRL 324
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
R ++A+ F M + +EA + S + +CA L + ++G +H Y+
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEA-IASVVASCAQLGSFDLGASVHGYV 372
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Query: 14 SMCELKQIQALIFCSGLQQ--DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYN 71
+MC+L ++ ++ C ++ D D K I+ G + R+ + I + +
Sbjct: 257 TMCDL-EMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWT 315
Query: 72 VMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS 131
VMI + G +A+ +F ++ + G + V+ + LG G VH +V++
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 132 GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
G D NSL+ MYA+ G L +FE +RD VSWN +ISG + +A+ F
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 192 QRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ M+ ++ ++ + TVVS L AC++ VGK IH +
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIV 474
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 5/156 (3%)
Query: 62 IQQPSLFN----YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
I+ S+ N +N I + G ++ +S F + + + PD +T+P +LKA L
Sbjct: 2 IRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQR 61
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
+ G +H V+ +G D Y+ +SL+++YA+ G L+ +++FEE +RD V W MI
Sbjct: 62 LSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGC 121
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
R EA MR + KP T++ L+
Sbjct: 122 YSRAGIVGEACSLVNEMRFQGI-KPGPVTLLEMLSG 156
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 109/226 (48%), Gaps = 7/226 (3%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S++ SC + + + G D LN L I+ + G +L IF+ +
Sbjct: 351 SVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSL--ITMYAKCGHLDKSLVIFERMN 408
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWP-DNYTYPYVLKAIGCLGDVGQGR 122
+ L ++N +I +A+ +A+ LF++++ V D++T +L+A G + G+
Sbjct: 409 ERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGK 468
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
+H VI+S + + V +L+DMY++ G L + F+ +D VSW I+I+G
Sbjct: 469 LIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHG 528
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+ A+E + + S +PN ++ L++C+ + G +I S
Sbjct: 529 KGDIALEIYSEF-LHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFS 573
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 115 bits (287), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 114/226 (50%), Gaps = 7/226 (3%)
Query: 7 SLLKSCKSMCELKQIQALIFC---SGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+L+ +C + L Q + C SG++ + L+ + GD A R+F+
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV--KCGDISNARRVFNEHS 304
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
L + MI + GS A+SLFQ+++ + P+ T VL G + ++ GR
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VH IK G+ +D V N+L+ MYA+ + D K +FE ++D V+WN +ISG +
Sbjct: 365 VHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGS 423
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
EA+ F RM ES PN TV S +ACA+L + VG +H+Y
Sbjct: 424 IHEALFLFHRMNSESV-TPNGVTVASLFSACASLGSLAVGSSLHAY 468
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+ A ++F+ I ++ + MI + K + LF ++RE+ V + YTY ++
Sbjct: 190 GEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLI 249
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A L + QG+ H ++KSG+E + + SL+DMY + G +S+ + +F E D V
Sbjct: 250 MACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLV 309
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
W MI G EA+ FQ+M+ + KPN T+ S L+ C + N E+G+ +H
Sbjct: 310 MWTAMIVGYTHNGSVNEALSLFQKMK-GVEIKPNCVTIASVLSGCGLIENLELGRSVH 366
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 10/226 (4%)
Query: 5 CISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHY---ALRIFDH 61
C LL C ++ L+Q ++ +GL D KL+++ G F Y A +FD
Sbjct: 47 CFLLLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSL-----YGFFGYTKDARLVFDQ 101
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
I +P + + VM++ + + L+ L + G D+ + LKA L D+ G
Sbjct: 102 IPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNG 161
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
+K+H ++K FD V L+DMYA+ G + ++F + R+ V W MI+G V+
Sbjct: 162 KKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+E + F RMR E+ NE T + + AC L GK H
Sbjct: 221 DLCEEGLVLFNRMR-ENNVLGNEYTYGTLIMACTKLSALHQGKWFH 265
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 3/173 (1%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+F+ + + +N +I F++ GS A+ LF ++ + V P+ T + A LG
Sbjct: 399 VFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGS 458
Query: 118 VGQGRKVHAFVIKSGL--EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMI 175
+ G +HA+ +K G +V +L+D YA+ G + +F+ +++ ++W+ MI
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 176 SGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
G + ++E F+ M ++ ++KPNE+T S L+AC GK+ S
Sbjct: 519 GGYGKQGDTIGSLELFEEM-LKKQQKPNESTFTSILSACGHTGMVNEGKKYFS 570
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 6/168 (3%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD A IFD I++ + ++ MI + K+G ++ LF+++ + P+ T+ +L
Sbjct: 494 GDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSIL 553
Query: 110 KAIGCLGDVGQGRKVHAFVIKS---GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
A G G V +G+K + + K Y C ++DM A G L ++ E+ P +
Sbjct: 554 SACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTC--MVDMLARAGELEQALDIIEKMPIQ 611
Query: 167 DNVS-WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
+V + + GC RF ++M + + +VS L A
Sbjct: 612 PDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYA 659
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 122/228 (53%), Gaps = 9/228 (3%)
Query: 6 ISLLKSC----KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH 61
+SLL+ C KS+ +K + I GL++D L I+ + D A +F++
Sbjct: 7 LSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSL--INVYFTCKDHCSARHVFEN 64
Query: 62 IQ-QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGV-WPDNYTYPYVLKAIGCLGDVG 119
+ ++ +N ++ ++K F + +F++L + PD++T+P V+KA G LG
Sbjct: 65 FDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREF 124
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
GR +H V+KSG D V +SL+ MYA+ + ++F+E P+RD SWN +IS
Sbjct: 125 LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFY 184
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ ++A+E F RM S +PN ++ ++AC+ L E GKEIH
Sbjct: 185 QSGEAEKALELFGRME-SSGFEPNSVSLTVAISACSRLLWLERGKEIH 231
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 111/212 (52%), Gaps = 3/212 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+ I L+ SG D + L+ + ++ F +L++FD + + + ++N +I F
Sbjct: 127 RMIHTLVVKSGYVCDVVVASSLVGMYAKFNL--FENSLQVFDEMPERDVASWNTVISCFY 184
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G +A+ LF ++ G P++ + + A L + +G+++H +K G E D Y
Sbjct: 185 QSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEY 244
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
V ++L+DMY + L +E+F++ P + V+WN MI G V + +E RM +E
Sbjct: 245 VNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG 304
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+P++ T+ S L AC+ RN GK IH Y+
Sbjct: 305 T-RPSQTTLTSILMACSRSRNLLHGKFIHGYV 335
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 93/166 (56%), Gaps = 1/166 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+ + A +F Q+ ++NVMI ++ G++ +A+ ++ Q+ GV PD T+ VL
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A L + +G+++H + +S LE D + ++L+DMY++ G + +F P +D V
Sbjct: 418 PACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV 477
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
SW +MIS + +EA+ F M+ + KP+ T+++ L+AC
Sbjct: 478 SWTVMISAYGSHGQPREALYQFDEMQ-KFGLKPDGVTLLAVLSACG 522
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A +F + + SL +N MIK + KG + + + ++ +G P T +L A
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
++ G+ +H +VI+S + D YV SL+D+Y + G + + +F +T SWN+M
Sbjct: 322 SRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVM 381
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
IS + + +A+E + +M + KP+ T S L AC+ L E GK+IH
Sbjct: 382 ISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLAALEKGKQIH 433
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 10/171 (5%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+L +C + L KQI I S L+ D L+ L+ + S G+ A RIF+
Sbjct: 412 TFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMY--SKCGNEKEAFRIFN 469
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I + + ++ VMI A+ G R A+ F ++++ G+ PD T VL A G G + +
Sbjct: 470 SIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDE 529
Query: 121 GRKVHA-FVIKSGLE--FDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
G K + K G+E + Y C ++D+ GRL + E+ ++TP+ +
Sbjct: 530 GLKFFSQMRSKYGIEPIIEHYSC--MIDILGRAGRLLEAYEIIQQTPETSD 578
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-WNIMISGCVRCK 182
VH ++ GL D +C SL+++Y + +FE R +V WN ++SG +
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
F + +E F+R+ S P+ T + + A AL +G+ IH+ +
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLV 133
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 114 bits (286), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 93/185 (50%), Gaps = 2/185 (1%)
Query: 47 SSIGDFHYALRIFDHIQQPSL--FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYT 104
+S + A +FD I P + +++MI+A+A +A+ L+ ++ GV P YT
Sbjct: 46 ASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYT 105
Query: 105 YPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
YP+VLKA L + G+ +H+ V S D YVC +L+D YA+ G L ++F+E P
Sbjct: 106 YPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
Query: 165 DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
RD V+WN MISG + I F MR PN +T+V A GK
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Query: 225 EIHSY 229
+H Y
Sbjct: 226 AVHGY 230
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 1/184 (0%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
IS + G A R F I + +YN +I + LF ++R G+ PD
Sbjct: 350 ISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDI 409
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
T VL A L +G G H + + G + +CN+LMDMY + G+L K +F+
Sbjct: 410 TTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDT 469
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
RD VSWN M+ G +EA+ F M+ E+ P+E T+++ L+AC+ +
Sbjct: 470 MHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQ-ETGVNPDEVTLLAILSACSHSGLVDE 528
Query: 223 GKEI 226
GK++
Sbjct: 529 GKQL 532
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 88/181 (48%), Gaps = 9/181 (4%)
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLF-QQLREDGVWPDNYTYPYVLKAI 112
YA R+FD + + ++ MI + + + A +F Q L D V P + I
Sbjct: 258 YARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV---AMVTPVAIGLI 314
Query: 113 --GC--LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
GC GD+ GR VH + +K+G D V N+++ YA+ G L D F E +D
Sbjct: 315 LMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDV 374
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+S+N +I+GCV R +E+ F MR S +P+ T++ LTAC+ L G H
Sbjct: 375 ISYNSLITGCVVNCRPEESFRLFHEMR-TSGIRPDITTLLGVLTACSHLAALGHGSSCHG 433
Query: 229 Y 229
Y
Sbjct: 434 Y 434
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 106/227 (46%), Gaps = 7/227 (3%)
Query: 8 LLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
+LK+C +++ + K I + + CS D L + + G+ A+++FD + +
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTAL--VDFYAKCGELEMAIKVFDEMPK 166
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLRE-DGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ +N MI F+ I LF +R DG+ P+ T + A+G G + +G+
Sbjct: 167 RDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKA 226
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VH + + G D V ++D+YA+ + + +F+ ++ V+W+ MI G V +
Sbjct: 227 VHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEM 286
Query: 184 FQEAIE-FFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+EA E FFQ + ++ + L CA + G+ +H Y
Sbjct: 287 IKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCY 333
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 121 GRKVHAFVIKSGLEFDA-YVCNSLMDMYAELGRLSDFKELFEETPDR--DNVSWNIMISG 177
G+ +H ++K L + V +L +YA + + +F+E P + ++W++MI
Sbjct: 18 GQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRA 77
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++A++ + +M + S +P + T L ACA LR + GK IHS++
Sbjct: 78 YASNDFAEKALDLYYKM-LNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHV 129
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 8/231 (3%)
Query: 2 KGTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDF-HYALRIFD 60
K + L+ C S+ KQIQ + L +D +NK++ S+ DF Y+ I
Sbjct: 6 KSVLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSA--DFASYSSVILH 63
Query: 61 HIQQP-SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
I+ S F+YN ++ ++A R I ++ +G PD +T+P V KA G +
Sbjct: 64 SIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIR 123
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
+G+++H V K G D YV NSL+ Y G + ++F E P RD VSW +I+G
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
R ++EA++ F +M +E PN AT V L + + +GK IH I
Sbjct: 184 RTGLYKEALDTFSKMDVE----PNLATYVCVLVSSGRVGCLSLGKGIHGLI 230
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 109/214 (50%), Gaps = 5/214 (2%)
Query: 17 ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKA 76
E KQI ++ G D N L+ G+ A ++F + + ++ +I
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFY--GVCGESRNACKVFGEMPVRDVVSWTGIITG 181
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFD 136
F + G ++ A+ F ++ V P+ TY VL + G +G + G+ +H ++K
Sbjct: 182 FTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS 238
Query: 137 AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRM 196
N+L+DMY + +LSD +F E +D VSWN MISG V C+R +EAI+ F M+
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 197 ESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
S KP+ + S L+ACA+L + G+ +H YI
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYI 332
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGVWPDNYTYPYVLKAIG 113
A+R+F +++ ++N MI + AI LF ++ G+ PD + VL A
Sbjct: 258 AMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACA 317
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
LG V GR VH +++ +G+++D ++ +++DMYA+ G + E+F ++ +WN
Sbjct: 318 SLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNA 377
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
++ G E++ +F+ M ++ KPN T ++ L AC
Sbjct: 378 LLGGLAIHGHGLESLRYFEEM-VKLGFKPNLVTFLAALNAC 417
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 113 bits (283), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 123/262 (46%), Gaps = 34/262 (12%)
Query: 2 KGTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH 61
K I+LL S + E++QI A ++ G +D + + S YA +I D
Sbjct: 6 KHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDR 65
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG--VWPDNYTYPYVLKAIGCLGDVG 119
++P+LF N MI+A K ++ ++++ G + PDNYT ++++A L
Sbjct: 66 SEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRE 125
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRL------------SDF----------- 156
G +VH I+ G + D +V L+ +YAELG L DF
Sbjct: 126 TGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 157 --------KELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
++LFE P+RD ++WN MISG + +EA+ F M++E K N ++
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGV-KVNGVAMI 244
Query: 209 STLTACAALRNAEVGKEIHSYI 230
S L+AC L + G+ HSYI
Sbjct: 245 SVLSACTQLGALDQGRWAHSYI 266
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 90/175 (51%), Gaps = 1/175 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD +A ++F+ + + +N MI +A+ G R A+++F ++ +GV + VL
Sbjct: 188 GDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVL 247
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A LG + QGR H+++ ++ ++ + +L+D+YA+ G + E+F +++
Sbjct: 248 SACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVY 307
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
+W+ ++G ++ +E F M+ + PN T VS L C+ + + G+
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGV-TPNAVTFVSVLRGCSVVGFVDEGQ 361
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 76/151 (50%), Gaps = 10/151 (6%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD A+ +F +++ +++ ++ + A G + + LF +++DGV P+ T+ VL
Sbjct: 289 GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVL 348
Query: 110 KAIGCLGDVGQGRK-----VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
+ +G V +G++ + F I+ LE Y C L+D+YA GRL D + ++ P
Sbjct: 349 RGCSVVGFVDEGQRHFDSMRNEFGIEPQLEH--YGC--LVDLYARAGRLEDAVSIIQQMP 404
Query: 165 DRDNVS-WNIMISGCVRCKRFQEAIEFFQRM 194
+ + + W+ ++ K + + ++M
Sbjct: 405 MKPHAAVWSSLLHASRMYKNLELGVLASKKM 435
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 116/225 (51%), Gaps = 7/225 (3%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLN-KLMAISTDSSIGDFHYALRIFDHI--QQ 64
+ CK++ ++K I + G+ TLN IST S+G +A+ +
Sbjct: 34 FIHKCKTISQVKLIHQKLLSFGIL----TLNLTSHLISTYISVGCLSHAVSLLRRFPPSD 89
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
++++N +I+++ G + + LF + PDNYT+P+V KA G + V G
Sbjct: 90 AGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESA 149
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
HA + +G + +V N+L+ MY+ LSD +++F+E D VSWN +I + +
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+ A+E F RM E +P+ T+V+ L CA+L +GK++H +
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCF 254
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 125/261 (47%), Gaps = 42/261 (16%)
Query: 8 LLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAI-STDSSIGDFHYALRIFDHIQ 63
+ K+C + ++ AL +G + N L+A+ S S+ D A ++FD +
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD---ARKVFDEMS 189
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
+ ++N +I+++AK G + A+ +F ++ E G PDN T VL LG G+
Sbjct: 190 VWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGK 249
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
++H F + S + + +V N L+DMYA+ G + + +F +D VSWN M++G +
Sbjct: 250 QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG 309
Query: 183 RFQEAIEFFQRMRME----------------------------------SKEKPNEATVV 208
RF++A+ F++M+ E S KPNE T++
Sbjct: 310 RFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLI 369
Query: 209 STLTACAALRNAEVGKEIHSY 229
S L+ CA++ GKEIH Y
Sbjct: 370 SVLSGCASVGALMHGKEIHCY 390
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 109/210 (51%), Gaps = 14/210 (6%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL----FNYNVMIKAFAKKGSFRRAISL 89
+D ++ ++ S IG F A+R+F+ +Q+ + ++ I +A++G A+ +
Sbjct: 293 KDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGV 352
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEF-------DAYVCNS 142
+Q+ G+ P+ T VL +G + G+++H + IK ++ + V N
Sbjct: 353 CRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQ 412
Query: 143 LMDMYAELGRLSDFKELFEE-TP-DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES-K 199
L+DMYA+ ++ + +F+ +P +RD V+W +MI G + +A+E M E +
Sbjct: 413 LIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQ 472
Query: 200 EKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+PN T+ L ACA+L +GK+IH+Y
Sbjct: 473 TRPNAFTISCALVACASLAALRIGKQIHAY 502
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRD-----------TLNKLMAISTDSSIGDF 52
T IS+L C S+ L + I C ++ D +N+L+ + D
Sbjct: 367 TLISVLSGCASVGALMHGKE-IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 53 HYALRIFDHI--QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG--VWPDNYTYPYV 108
A+ FD + ++ + + VMI +++ G +A+ L ++ E+ P+ +T
Sbjct: 426 ARAM--FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLE-FDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
L A L + G+++HA+ +++ +V N L+DMYA+ G +SD + +F+ ++
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
V+W +++G +EA+ F MR K + T++ L AC+
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMR-RIGFKLDGVTLLVVLYACS 590
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 104/197 (52%), Gaps = 2/197 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+ I +++ SG N L+ + + GD A ++FD + + L +N +I FA
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANC--GDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G A++L+ ++ G+ PD +T +L A +G + G++VH ++IK GL + +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
N L+D+YA GR+ + K LF+E D+++VSW +I G +EAIE F+ M
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 199 KEKPNEATVVSTLTACA 215
P E T V L AC+
Sbjct: 186 GLLPCEITFVGILYACS 202
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ DV G +H+ VI+SG YV NSL+ +YA G ++ ++F++ P++D V+WN +
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
I+G + +EA+ + M + KP+ T+VS L+ACA + +GK +H Y+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGI-KPDGFTIVSLLSACAKIGALTLGKRVHVYM 115
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 115/229 (50%), Gaps = 9/229 (3%)
Query: 4 TCISLLKSCKSMCELK-----QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
T S++KSC + L+ A++ GL DT + ++ S GD A ++
Sbjct: 109 TFTSVIKSCADLSALRIGKGVHCHAVVSGFGL----DTYVQAALVTFYSKCGDMEGARQV 164
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
FD + + S+ +N ++ F + G AI +F Q+RE G PD+ T+ +L A G V
Sbjct: 165 FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAV 224
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
G VH ++I GL+ + + +L+++Y+ G + +E+F++ + + +W MIS
Sbjct: 225 SLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAY 284
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
Q+A+E F +M + PN T V+ L+ACA E G+ ++
Sbjct: 285 GTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVY 333
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 119/224 (53%), Gaps = 3/224 (1%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
+++++ + +L+Q+ A + +G + R L KL+ ++ + Y +F + P
Sbjct: 14 AIVRAGPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARA--IAYTHLLFLSVPLPD 71
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
F +N +IK+ +K ++ ++++ V P NYT+ V+K+ L + G+ VH
Sbjct: 72 DFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHC 131
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
+ SG D YV +L+ Y++ G + +++F+ P++ V+WN ++SG + E
Sbjct: 132 HAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADE 191
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
AI+ F +MR ES +P+ AT VS L+ACA +G +H YI
Sbjct: 192 AIQVFYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYI 234
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 97/224 (43%), Gaps = 19/224 (8%)
Query: 3 GTCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
T +SLL +C + + I GL + L I+ S GD A +F
Sbjct: 209 ATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTAL--INLYSRCGDVGKAREVF 266
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLRED-GVWPDNYTYPYVLKAIGCLGDV 118
D +++ ++ + MI A+ G ++A+ LF ++ +D G P+N T+ VL A G V
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 119 GQGRKVHAFVIKS-----GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS--- 170
+GR V+ + KS G+E +VC ++DM G L + + + +
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEH--HVC--MVDMLGRAGFLDEAYKFIHQLDATGKATAPA 382
Query: 171 -WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
W M+ C + + +E +R+ + P ++S + A
Sbjct: 383 LWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYA 426
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 122/229 (53%), Gaps = 7/229 (3%)
Query: 7 SLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+LL++C KS+ KQ+ I +GL+ + KL+ + T + G A ++FD
Sbjct: 116 ALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYT--ACGSVKDAQKVFDEST 173
Query: 64 QPSLFNYNVMIKA--FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+++++N +++ + K ++ +S F ++RE GV + Y+ V K+ + QG
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
K HA IK+GL ++ SL+DMY + G++ + +F+E +RD V W MI+G
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHN 293
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
KR EA+ F+ M E K PN + + L ++ ++GKE+H+++
Sbjct: 294 KRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHV 342
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 94/182 (51%), Gaps = 3/182 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYV 108
G A R+FD I + + + MI A A+ LF+ + E+ ++P++ +
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFD-AYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
L +G + + G++VHA V+KS + +V + L+D+Y + G ++ + +F + R+
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRN 382
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+SW ++SG RF +A+ M+ E +P+ T+ + L CA LR + GKEIH
Sbjct: 383 AISWTALMSGYAANGRFDQALRSIVWMQQEG-FRPDVVTIATVLPVCAELRAIKQGKEIH 441
Query: 228 SY 229
Y
Sbjct: 442 CY 443
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD R+F +Q + ++ ++ +A G F +A+ ++++G PD T VL
Sbjct: 366 GDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVL 425
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
L + QG+++H + +K+ + + SLM MY++ G LF+ R+
Sbjct: 426 PVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVK 485
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+W MI V + IE F R+ + SK +P+ T+ LT C+ L+ ++GKE+H +
Sbjct: 486 AWTAMIDCYVENCDLRAGIEVF-RLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGH 544
Query: 230 I 230
I
Sbjct: 545 I 545
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
H + P + + ++ I FA++ + A+++ L + G+ + T+ +L+A +
Sbjct: 72 HSKNPYIIHRDIQI--FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLH 129
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G++VH + +GLE + ++ L+ MY G + D +++F+E+ + SWN ++ G V
Sbjct: 130 GKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVI 189
Query: 181 C--KRFQEAIEFFQRMR 195
KR+Q+ + F MR
Sbjct: 190 SGKKRYQDVLSTFTEMR 206
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQ----DRDTLNKLMAISTDSSIGDFHYALRIF 59
T ++L C + +KQ + I C L+ + + LM + + + + Y +R+F
Sbjct: 420 TIATVLPVCAELRAIKQGKE-IHCYALKNLFLPNVSLVTSLMVMYSKCGVPE--YPIRLF 476
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
D ++Q ++ + MI + + R I +F+ + PD+ T VL L +
Sbjct: 477 DRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALK 536
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G+++H ++K E +V ++ MY + G L F+ + +++W +I
Sbjct: 537 LGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYG 596
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ F++AI F++M + PN T + L+ C+
Sbjct: 597 CNELFRDAINCFEQM-VSRGFTPNTFTFTAVLSICS 631
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 117/219 (53%), Gaps = 10/219 (4%)
Query: 21 IQALIFCSGLQQDRDTLNKL---------MAISTDSSIGDFHYALRIFDHIQQPSLFNYN 71
I A C L+ R +K+ ++ + +G A +F + + +N
Sbjct: 62 IDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWN 121
Query: 72 VMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS 131
M+ FA+ A+ F + ++G + Y++ VL A L D+ +G +VH+ + KS
Sbjct: 122 SMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKS 181
Query: 132 GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
D Y+ ++L+DMY++ G ++D + +F+E DR+ VSWN +I+ + EA++ F
Sbjct: 182 PFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF 241
Query: 192 QRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
Q M +ES+ +P+E T+ S ++ACA+L +VG+E+H +
Sbjct: 242 Q-MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRV 279
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 7/201 (3%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
R+ + + IS + A +F + + ++ ++N +I + + G A+SLF L
Sbjct: 318 RNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLL 377
Query: 94 REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEF------DAYVCNSLMDMY 147
+ + V P +Y++ +LKA L ++ G + H V+K G +F D +V NSL+DMY
Sbjct: 378 KRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMY 437
Query: 148 AELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATV 207
+ G + + +F + +RD VSWN MI G + EA+E F+ M +ES EKP+ T+
Sbjct: 438 VKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM-LESGEKPDHITM 496
Query: 208 VSTLTACAALRNAEVGKEIHS 228
+ L+AC E G+ S
Sbjct: 497 IGVLSACGHAGFVEEGRHYFS 517
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 117/259 (45%), Gaps = 38/259 (14%)
Query: 7 SLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S+L +C + ++ Q+ +LI S D + L + S G+ + A R+FD +
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSAL--VDMYSKCGNVNDAQRVFDEMG 214
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
++ ++N +I F + G A+ +FQ + E V PD T V+ A L + G++
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 124 VHAFVIKSG-LEFDAYVCNSLMDMYAELGRLSDFKELFEETP------------------ 164
VH V+K+ L D + N+ +DMYA+ R+ + + +F+ P
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 165 -------------DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
+R+ VSWN +I+G + +EA+ F ++ ES P + + L
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV-CPTHYSFANIL 393
Query: 212 TACAALRNAEVGKEIHSYI 230
ACA L +G + H ++
Sbjct: 394 KACADLAELHLGMQAHVHV 412
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 64/140 (45%), Gaps = 32/140 (22%)
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKE----------------------- 158
R VHA VIKSG + ++ N L+D Y++ G L D ++
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 159 --------LFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVST 210
LF P+RD +WN M+SG + R +EA+ +F M E NE + S
Sbjct: 100 GFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGF-VLNEYSFASV 158
Query: 211 LTACAALRNAEVGKEIHSYI 230
L+AC+ L + G ++HS I
Sbjct: 159 LSACSGLNDMNKGVQVHSLI 178
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 96/183 (52%), Gaps = 3/183 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR--EDGVWPDNYTYPY 107
G+ A ++FD + + ++ +IK + + A+ LF +R + V PD
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 108 VLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
VLKA G ++ G +HA+ +K+ L YV +SL+DMY +G++ +F E P R+
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRN 173
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
V+W +I+G V R++E + +F M S+E + T L ACA LR + GK IH
Sbjct: 174 AVTWTAIITGLVHAGRYKEGLTYFSEMS-RSEELSDTYTFAIALKACAGLRQVKYGKAIH 232
Query: 228 SYI 230
+++
Sbjct: 233 THV 235
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 84/179 (46%), Gaps = 1/179 (0%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+G + R+F + + + +I G ++ ++ F ++ D YT+
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
LKA L V G+ +H VI G V NSL MY E G + D LFE +RD
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
VSW +I R + +A+E F +MR S+ PNE T S +ACA+L G+++H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMR-NSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 109/223 (48%), Gaps = 6/223 (2%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+ +C S+ L +Q+ + GL N +M + S+ G+ A +F
Sbjct: 312 TFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMY--STCGNLVSASVLFQ 369
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++ + +++ +I + + G F +R+ G P ++ +L G + +
Sbjct: 370 GMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEG 429
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
GR+VHA + GLE ++ V +SL++MY++ G + + +F ET D VS MI+G
Sbjct: 430 GRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAE 489
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
+ +EAI+ F++ ++ +P+ T +S LTAC ++G
Sbjct: 490 HGKSKEAIDLFEK-SLKVGFRPDSVTFISVLTACTHSGQLDLG 531
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 107/223 (47%), Gaps = 6/223 (2%)
Query: 9 LKSCKSMCELKQIQAL---IFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
LK+C + ++K +A+ + G N L + T+ G+ L +F+++ +
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTE--CGEMQDGLCLFENMSER 273
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ ++ +I A+ + G +A+ F ++R V P+ T+ + A L + G ++H
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLH 333
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
V+ GL V NS+M MY+ G L LF+ RD +SW+ +I G + +
Sbjct: 334 CNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGE 393
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
E ++F MR +S KP + + S L+ + E G+++H+
Sbjct: 394 EGFKYFSWMR-QSGTKPTDFALASLLSVSGNMAVIEGGRQVHA 435
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 7/232 (3%)
Query: 2 KGTCISLLKSCK----SMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALR 57
+GT +L++C+ + ++QI A I GL+ N L+ + + + D A R
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL--ARR 243
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+FD ++ ++ MI +K AI LF + G+ P Y + VL A +
Sbjct: 244 VFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIES 303
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
+ G ++H V+K G D YVCN+L+ +Y LG L + +F RD V++N +I+G
Sbjct: 304 LEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+C ++A+E F+RM ++ E P+ T+ S + AC+A G+++H+Y
Sbjct: 364 LSQCGYGEKAMELFKRMHLDGLE-PDSNTLASLVVACSADGTLFRGQQLHAY 414
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 104/179 (58%), Gaps = 1/179 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
D AL F + ++ +NVM+ A+ R + +F+Q++ + + P+ YTYP +L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
K LGD+ G ++H+ +IK+ + +AYVC+ L+DMYA+LG+L ++ +D V
Sbjct: 498 KTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVV 557
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
SW MI+G + +A+ F++M ++ + +E + + ++ACA L+ + G++IH+
Sbjct: 558 SWTTMIAGYTQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHA 615
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 112/214 (52%), Gaps = 3/214 (1%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+S +++ E +QI A SG D N L+ + S G + F+ +
Sbjct: 596 NAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLY--SRCGKIEESYLAFEQTE 653
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+N ++ F + G+ A+ +F ++ +G+ +N+T+ +KA ++ QG++
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VHA + K+G + + VCN+L+ MYA+ G +SD ++ F E ++ VSWN +I+ +
Sbjct: 714 VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAAL 217
EA++ F +M + S +PN T+V L+AC+ +
Sbjct: 774 GSEALDSFDQM-IHSNVRPNHVTLVGVLSACSHI 806
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 115/227 (50%), Gaps = 6/227 (2%)
Query: 7 SLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S+L +CK + L+ Q+ L+ G D N L +S +G+ A IF ++
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL--VSLYFHLGNLISAEHIFSNMS 350
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
Q YN +I ++ G +A+ LF+++ DG+ PD+ T ++ A G + +G++
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+HA+ K G + + +L+++YA+ + + F ET + V WN+M+
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ + F++M++E + PN+ T S L C L + E+G++IHS I
Sbjct: 471 LRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLELGEQIHSQI 516
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 111/227 (48%), Gaps = 12/227 (5%)
Query: 9 LKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLF 68
LK+ S+ E +++ + I GL + KL GD + A ++FD + + ++F
Sbjct: 95 LKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFK--GDLYGAFKVFDEMPERTIF 152
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG-----DVGQGRK 123
+N MIK A + LF ++ + V P+ T+ VL+A C G DV + +
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA--CRGGSVAFDVVE--Q 208
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+HA ++ GL VCN L+D+Y+ G + + +F+ +D+ SW MISG + +
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EAI F M + P S L+AC + + E+G+++H +
Sbjct: 269 EAEAIRLFCDMYVLGI-MPTPYAFSSVLSACKKIESLEIGEQLHGLV 314
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 109/230 (47%), Gaps = 6/230 (2%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+LK+C + +L+ QI + I + Q + + L I + +G A I
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL--IDMYAKLGKLDTAWDILI 549
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ ++ MI + + +A++ F+Q+ + G+ D + A L + +
Sbjct: 550 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 609
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+++HA SG D N+L+ +Y+ G++ + FE+T DN++WN ++SG +
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ 669
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+EA+ F RM E + N T S + A + N + GK++H+ I
Sbjct: 670 SGNNEEALRVFVRMNREGIDN-NNFTFGSAVKAASETANMKQGKQVHAVI 718
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 90 FQQLRED-----GVWPDNYTYPYVLKAIGCL---GDVGQGRKVHAFVIKSGLEFDAYVCN 141
FQ+ R D G+ P++ T ++L+ GCL G + +GRK+H+ ++K GL+ + +
Sbjct: 67 FQEKRIDSVENRGIRPNHQTLKWLLE--GCLKTNGSLDEGRKLHSQILKLGLDSNGCLSE 124
Query: 142 SLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEK 201
L D Y G L ++F+E P+R +WN MI E F RM E+
Sbjct: 125 KLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENV-T 183
Query: 202 PNEATVVSTLTACAALRNA-EVGKEIHSYI 230
PNE T L AC A +V ++IH+ I
Sbjct: 184 PNEGTFSGVLEACRGGSVAFDVVEQIHARI 213
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 95/210 (45%), Gaps = 10/210 (4%)
Query: 3 GTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
G+ + +M + KQ+ A+I +G + + N L IS + G A + F +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL--ISMYAKCGSISDAEKQFLEV 753
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG- 121
+ ++N +I A++K G A+ F Q+ V P++ T VL A +G V +G
Sbjct: 754 STKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGI 813
Query: 122 RKVHAFVIKSGL--EFDAYVCNSLMDMYAELGRLSDFKELFEETPDR-DNVSWNIMISGC 178
+ + GL + + YVC ++DM G LS KE +E P + D + W ++S C
Sbjct: 814 AYFESMNSEYGLSPKPEHYVC--VVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSAC 871
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
V K + I F + E + AT V
Sbjct: 872 VVHKNME--IGEFAAHHLLELEPEDSATYV 899
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 120/238 (50%), Gaps = 19/238 (7%)
Query: 5 CISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
C++L+ CKS+ LKQI A I GL L+KL+ +S+ + YAL I I
Sbjct: 12 CLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLS---YALSILRQIPN 68
Query: 65 PSLFNYNVMIKAFAKKGSFRR---AISLFQQL---REDGVWPDNYTYPYVLKAIGCLGDV 118
PS+F YN +I + + + A SL+ Q+ R + V P+ +TYP + KA G
Sbjct: 69 PSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQW 128
Query: 119 G-QGRKVHAFVIK--SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMI 175
GR +HA V+K + D +V +L+ YA G+L + + LFE + D +WN ++
Sbjct: 129 HRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLL 188
Query: 176 SGCVRCKRF---QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ + +E + F RM++ +PNE ++V+ + +CA L G H Y+
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQV----RPNELSLVALIKSCANLGEFVRGVWAHVYV 242
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 22 QALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKK- 80
L F + DR L+ + G A +F+ I++P L +N ++ A+A
Sbjct: 138 HVLKFLEPVNHDRFVQAALVGFYANC--GKLREARSLFERIREPDLATWNTLLAAYANSE 195
Query: 81 --GSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
S + LF +++ V P+ + ++K+ LG+ +G H +V+K+ L + +
Sbjct: 196 EIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQF 252
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
V SL+D+Y++ G LS +++F+E RD +N MI G QE IE ++ + +
Sbjct: 253 VGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSL-ISQ 311
Query: 199 KEKPNEATVVSTLTACA 215
P+ AT V T++AC+
Sbjct: 312 GLVPDSATFVVTISACS 328
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 12/174 (6%)
Query: 4 TCISLLKSCKSMCE-LKQIQALIFCSGLQQDRDTLNKLMA---ISTDSSIGDFHYALRIF 59
+ ++L+KSC ++ E ++ + A ++ + ++ TLN+ + I S G +A ++F
Sbjct: 218 SLVALIKSCANLGEFVRGVWAHVY---VLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVF 274
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
D + Q + YN MI+ A G + I L++ L G+ PD+ T+ + A G V
Sbjct: 275 DEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVD 334
Query: 120 QGRKV-HAFVIKSGLE--FDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
+G ++ ++ G+E + Y C L+D+ GRL + +E ++ P + N +
Sbjct: 335 EGLQIFNSMKAVYGIEPKVEHYGC--LVDLLGRSGRLEEAEECIKKMPVKPNAT 386
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 34/246 (13%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+ IS L C ++ ++KQI + GL Q L KL+ T + YA R+ + +Q
Sbjct: 51 SLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQ 110
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ F + +I+ +A +G F AI+++ +R++ + P ++T+ +LKA G + D+ GR+
Sbjct: 111 FRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQ 170
Query: 124 VHAFVIK-SGLEFDAYVCNSLMDMY-------------------------------AELG 151
HA + G F YV N+++DMY A +G
Sbjct: 171 FHAQTFRLRGFCF-VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVG 229
Query: 152 RLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
+ ELFE P +D V+W M++G + + QEA+E+F RM +S + +E TV +
Sbjct: 230 NMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRME-KSGIRADEVTVAGYI 288
Query: 212 TACAAL 217
+ACA L
Sbjct: 289 SACAQL 294
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 2/196 (1%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
+RD ++ I+ + +G+ A +F+ + + + M+ FA+ + A+ F +
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 93 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVC--NSLMDMYAEL 150
+ + G+ D T + A LG + KSG +V ++L+DMY++
Sbjct: 272 MEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKC 331
Query: 151 GRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVST 210
G + + +F +++ +++ MI G R QEA+ F M +++ KPN T V
Sbjct: 332 GNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGA 391
Query: 211 LTACAALRNAEVGKEI 226
L AC+ + G+++
Sbjct: 392 LMACSHSGLVDQGRQV 407
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 114/203 (56%), Gaps = 5/203 (2%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
+ +F S +++ + + L+ DS G+ + A ++F+ + + ++ ++ +I F++
Sbjct: 213 HMATTLFRSMPERNSGSWSTLIKGYVDS--GELNRAKQLFELMPEKNVVSWTTLINGFSQ 270
Query: 80 KGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYV 139
G + AIS + ++ E G+ P+ YT VL A G +G G ++H +++ +G++ D +
Sbjct: 271 TGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAI 330
Query: 140 CNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESK 199
+L+DMYA+ G L +F +D +SW MI G RF +AI+ F++M M S
Sbjct: 331 GTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM-MYSG 389
Query: 200 EKPNEATVVSTLTACAALRNAEV 222
EKP+E ++ LTAC L ++EV
Sbjct: 390 EKPDEVVFLAVLTAC--LNSSEV 410
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 101/193 (52%), Gaps = 7/193 (3%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
ISL+ +CK L+ + A I G+ R +S S + Y+L IF + ++
Sbjct: 33 ISLIHACKDTASLRHVHAQILRRGVLSSRVAAQ---LVSCSSLLKSPDYSLSIFRNSEER 89
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ F N +I+ + F ++ F + GV PD T+P+VLK+ LG GR +H
Sbjct: 90 NPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALH 149
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN----VSWNIMISGCVRC 181
A +K+ ++ D++V SL+DMYA+ G+L ++FEE+PDR + WN++I+G R
Sbjct: 150 AATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRA 209
Query: 182 KRFQEAIEFFQRM 194
K A F+ M
Sbjct: 210 KDMHMATTLFRSM 222
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 48/204 (23%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIF----DHIQQPSLFNYNVMIKAFAKKGSFRRAIS 88
D D+ +L + + G +A ++F D I++ S+ +NV+I + + A +
Sbjct: 158 DCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATT 217
Query: 89 LFQQL--REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM 146
LF+ + R G W ++L+
Sbjct: 218 LFRSMPERNSGSW-----------------------------------------STLIKG 236
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
Y + G L+ K+LFE P+++ VSW +I+G + ++ AI + M +E KPNE T
Sbjct: 237 YVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM-LEKGLKPNEYT 295
Query: 207 VVSTLTACAALRNAEVGKEIHSYI 230
+ + L+AC+ G IH YI
Sbjct: 296 IAAVLSACSKSGALGSGIRIHGYI 319
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 121/228 (53%), Gaps = 6/228 (2%)
Query: 4 TCISLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+LK+C K++ +Q+ +L+ ++ D LM + + G+ ++FD
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMY--AKCGEISDCRKVFD 343
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + + +I A A++G AISLF+ ++ + +N T +L+A G +G +
Sbjct: 344 GMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLL 403
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+++HA +IK+ +E + Y+ ++L+ +Y + G D + ++ P RD VSW MISGC
Sbjct: 404 GKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSS 463
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
EA++F + M E E PN T S L ACA + +G+ IHS
Sbjct: 464 LGHESEALDFLKEMIQEGVE-PNPFTYSSALKACANSESLLIGRSIHS 510
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 102/181 (56%), Gaps = 1/181 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+ ALR FD +++ + ++ +I A ++KG +AI +F + P+ +T +L
Sbjct: 232 GELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSIL 291
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
KA + GR+VH+ V+K ++ D +V SLMDMYA+ G +SD +++F+ +R+ V
Sbjct: 292 KACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTV 351
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+W +I+ R +EAI F+ M+ N TVVS L AC ++ +GKE+H+
Sbjct: 352 TWTSIIAAHAREGFGEEAISLFRIMK-RRHLIANNLTVVSILRACGSVGALLLGKELHAQ 410
Query: 230 I 230
I
Sbjct: 411 I 411
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 94/189 (49%), Gaps = 3/189 (1%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGV-WPD 101
IS+ +GD YA ++FD + + + + MI + K G A +LF+ + G+ + +
Sbjct: 124 ISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTN 183
Query: 102 NYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFE 161
+ +L + GR+VH ++K G+ + V +SL+ YA+ G L+ F+
Sbjct: 184 ERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFD 242
Query: 162 ETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAE 221
++D +SW +IS C R +AI F M + PNE TV S L AC+ +
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGM-LNHWFLPNEFTVCSILKACSEEKALR 301
Query: 222 VGKEIHSYI 230
G+++HS +
Sbjct: 302 FGRQVHSLV 310
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 7/212 (3%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +S+L++C S+ L K++ A I + ++++ + L+ + G+ A +
Sbjct: 387 TVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKC--GESRDAFNVLQ 444
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + ++ MI + G A+ +++ ++GV P+ +TY LKA +
Sbjct: 445 QLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLI 504
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
GR +H+ K+ + +V ++L+ MYA+ G +S+ +F+ P+++ VSW MI G R
Sbjct: 505 GRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYAR 564
Query: 181 CKRFQEAIEFFQRMRMESKEKPNE--ATVVST 210
+EA++ RM E E + AT++ST
Sbjct: 565 NGFCREALKLMYRMEAEGFEVDDYIFATILST 596
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
+++HA +K + Y N+L+ LG L +++F+ P+++ V+W MI G ++
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
EA F+ NE V L C+ E+G+++H
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVH 207
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 110 bits (275), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 98/179 (54%), Gaps = 1/179 (0%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+G+ A +F+ + + ++ MIK +++ +R AI++F ++ E+G+ PD T V
Sbjct: 979 LGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
+ A LG + G++VH + +++G D Y+ ++L+DMY++ G L +F P ++
Sbjct: 1039 ISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL 1098
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
WN +I G QEA++ F +M MES KPN T VS TAC + G+ I+
Sbjct: 1099 FCWNSIIEGLAAHGFAQEALKMFAKMEMESV-KPNAVTFVSVFTACTHAGLVDEGRRIY 1156
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 9/219 (4%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
++K C + L+ A + + L QD +N+ + T S A+ +Q+P++
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACT--SFKRLDLAVSTMTQMQEPNV 836
Query: 68 FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAF 127
F YN + K F R++ L+ ++ D V P +YTY ++KA G+ + H
Sbjct: 837 FVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH-- 894
Query: 128 VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEA 187
+ K G F + +L+D Y+ GR+ + +++F+E P+RD+++W M+S R A
Sbjct: 895 IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSA 954
Query: 188 IEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+M + NEAT + L N E + +
Sbjct: 955 NSLANQM-----SEKNEATSNCLINGYMGLGNLEQAESL 988
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 72 VMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS 131
+I ++ G R A +F ++ E D+ + ++ A + D+ +
Sbjct: 909 TLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSL----ANQ 960
Query: 132 GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
E + N L++ Y LG L + LF + P +D +SW MI G + KR++EAI F
Sbjct: 961 MSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 192 QRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+M ME P+E T+ + ++ACA L E+GKE+H Y
Sbjct: 1021 YKM-MEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMY 1057
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 121/230 (52%), Gaps = 7/230 (3%)
Query: 4 TCISLLKSCKSMC-ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
T + ++ +C+S+ + ++I + SG N ++ + DS D A ++FD +
Sbjct: 129 TLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADS---DSLSARKLFDEM 185
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+ + +++V+I+++ + + LF+++ E PD T VLKA + D+ G
Sbjct: 186 SERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVG 245
Query: 122 RKVHAFVIKSGLEF-DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
R VH F I+ G + D +VCNSL+DMY++ + +F+ET R+ VSWN +++G V
Sbjct: 246 RSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVH 305
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+R+ EA+E F M E+ E +E TVVS L C K IH I
Sbjct: 306 NQRYDEALEMFHLMVQEAVE-VDEVTVVSLLRVCKFFEQPLPCKSIHGVI 354
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD LR FD + ++NV++ G + F +LR G P+ T V+
Sbjct: 75 GDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVI 134
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A C G K+H +VI+SG + V NS++ MYA+ LS ++LF+E +RD +
Sbjct: 135 HA--CRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSA-RKLFDEMSERDVI 191
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
SW+++I V+ K ++ F+ M E+K +P+ TV S L AC + + +VG+ +H +
Sbjct: 192 SWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGF 251
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 4/177 (2%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
D A R+FD ++ ++N ++ F + A+ +F + ++ V D T +L+
Sbjct: 277 DVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLR 336
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
+ +H +I+ G E + +SL+D Y + D + + +D VS
Sbjct: 337 VCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVS 396
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ MISG R EAI F MR + PN TV+S L AC+ + K H
Sbjct: 397 CSTMISGLAHAGRSDEAISIFCHMR----DTPNAITVISLLNACSVSADLRTSKWAH 449
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 23/158 (14%)
Query: 74 IKAFAKKGSFRRAISLFQQLREDGV-WPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSG 132
IK + G +R +S + +++ GV + D + +P V KA L + QG
Sbjct: 16 IKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG----------- 64
Query: 133 LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
NS+ D Y + G L F+ RD+VSWN+++ G + +E + +F
Sbjct: 65 --------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFS 116
Query: 193 RMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++R+ E PN +T+V + AC +L G++IH Y+
Sbjct: 117 KLRVWGFE-PNTSTLVLVIHACRSLWFD--GEKIHGYV 151
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 25/199 (12%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTD-----SSIGDFHYALRI 58
T ISLL +C +L+ + + G+ R +++ T + G A R
Sbjct: 428 TVISLLNACSVSADLRTSK---WAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRT 484
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
FD I + ++ ++ V+I A+A G +A++LF ++++ G P+ TY L A G V
Sbjct: 485 FDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLV 544
Query: 119 GQGRKVHAFVIKSGLEFD------AYVCNSLMDMYAELGRLSDFKELFEETPDRDNV--- 169
+G + KS +E D Y C ++DM + G + EL + P+
Sbjct: 545 KKG----LMIFKSMVEEDHKPSLQHYSC--IVDMLSRAGEIDTAVELIKNLPEDVKAGAS 598
Query: 170 SWNIMISGCVRCKRFQEAI 188
+W ++SGC RF++ I
Sbjct: 599 AWGAILSGCR--NRFKKLI 615
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 95/158 (60%), Gaps = 1/158 (0%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+FD ++ + ++N +I A++ +A+ LFQ + DG P +++Y + A G
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
+ QG+ VHA++IKSG + A+ N+L+DMYA+ G + D +++F+ RD VSWN +++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ +EA+ +F+ MR +PNE + +S LTAC+
Sbjct: 338 YAQHGFGKEAVWWFEEMR-RVGIRPNEISFLSVLTACS 374
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 112/227 (49%), Gaps = 6/227 (2%)
Query: 7 SLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+LLK C K + + + + A I S + D N L+ + + G A ++F+ +
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMY--AKCGSLEEARKVFEKMP 122
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
Q + +I +++ A+ F Q+ G P+ +T V+KA G +
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H F +K G + + +V ++L+D+Y G + D + +F+ R++VSWN +I+G R
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++A+E FQ M + +P+ + S AC++ E GK +H+Y+
Sbjct: 243 TEKALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 1/129 (0%)
Query: 101 DNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF 160
D Y +LK + QGR VHA +++S D + N+L++MYA+ G L + +++F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 161 EETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA 220
E+ P RD V+W +ISG + R +A+ FF +M + PNE T+ S + A AA R
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM-LRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 221 EVGKEIHSY 229
G ++H +
Sbjct: 178 CCGHQLHGF 186
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 85/176 (48%), Gaps = 6/176 (3%)
Query: 7 SLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SL +C S L+Q + A + SG + N L+ + S G H A +IFD +
Sbjct: 267 SLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKS--GSIHDARKIFDRLA 324
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ + ++N ++ A+A+ G + A+ F+++R G+ P+ ++ VL A G + +G
Sbjct: 325 KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWH 384
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-WNIMISGC 178
+ + K G+ +A+ +++D+ G L+ EE P + W +++ C
Sbjct: 385 YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNAC 440
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G YA R+FD ++F ++ A+ + SF A++LF ++ V P+ YT+ +L
Sbjct: 286 GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILL 345
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
+I L + QG +H V+KSG V N+L++MYA+ G + D ++ F RD V
Sbjct: 346 NSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
+WN MISGC +EA+E F RM + + E PN T + L AC+ + E G
Sbjct: 406 TWNTMISGCSHHGLGREALEAFDRM-IFTGEIPNRITFIGVLQACSHIGFVEQG 458
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIG 113
A+R+ D + L ++ + + + G+F+ + + ++ ED VW +N TY L+
Sbjct: 190 AIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVW-NNLTYLSSLRLFS 248
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
L D+ +VH+ +++ G + C +L++MY + G++ + +F++T ++
Sbjct: 249 NLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTT 308
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKE-KPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++ + K F+EA+ F +M++KE PNE T L + A L + G +H +
Sbjct: 309 IMDAYFQDKSFEEALNLFS--KMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLV 364
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 121 GRKVHAFVI---KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
G +HA +I +S DAY NSL+++Y + ++LF+ P+R+ VSW M+ G
Sbjct: 50 GESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKG 109
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
E ++ F+ M + +PNE +C+ E GK+ H
Sbjct: 110 YQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFH 159
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 84/175 (48%), Gaps = 2/175 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG-VWPDNYTYPYVLKAIG 113
A ++FD + + ++ ++ M+K + G + LF+ + G P+ + V K+
Sbjct: 88 ARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCS 147
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
G + +G++ H +K GL +V N+L+ MY+ + + ++ P D ++
Sbjct: 148 NSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSS 207
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+SG + C F+E ++ ++ E N T +S+L + LR+ + ++HS
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFVW-NNLTYLSSLRLFSNLRDLNLALQVHS 261
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 108 bits (271), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 11/229 (4%)
Query: 10 KSCKSMCELKQIQALIFCSGLQQDRDTLNKLMA--ISTDSSIGDFHYALRIFDHIQQPSL 67
+ C ++ ++K +L GL ++ ++KL+ + + FHYA IFD I+ P+
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 68 FNYNVMIKAFAKKGSFRRAISLFQQL---REDGVWPDNYTYPYVLKAI--GCLGDVGQGR 122
F Y+ MI+ ++ + F + E+ + P T+ +++ A C VG +
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVG--K 136
Query: 123 KVHAFVIKSGLEF-DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
++H +V+K+G+ D++V ++ +Y E L D +++F+E P D V W+++++G VRC
Sbjct: 137 QIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRC 196
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
E +E F+ M ++ E P+E +V + LTACA + GK IH ++
Sbjct: 197 GLGSEGLEVFREMLVKGLE-PDEFSVTTALTACAQVGALAQGKWIHEFV 244
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD I QP + ++V++ + + G + +F+++ G+ PD ++ L A
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 115 LGDVGQGRKVHAFVIK-SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
+G + QG+ +H FV K S +E D +V +L+DMYA+ G + E+F++ R+ SW
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+I G ++A+ +R+ E KP+ ++ L ACA
Sbjct: 291 LIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACA 332
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYV 108
G A+ +F + + ++F++ +I +A G ++A++ ++L REDG+ PD+ V
Sbjct: 268 GCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGV 327
Query: 109 LKAIGCLGDVGQGRKVHAFV---IKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
L A G + +GR + + + + + Y C ++D+ GRL D L E+ P
Sbjct: 328 LAACAHGGFLEEGRSMLENMEARYEITPKHEHYSC--IVDLMCRAGRLDDALNLIEKMPM 385
Query: 166 RDNVS-WNIMISGC 178
+ S W +++GC
Sbjct: 386 KPLASVWGALLNGC 399
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 121/229 (52%), Gaps = 11/229 (4%)
Query: 10 KSCKSMCELKQIQALIFCSGLQQDRDTLNKLMA--ISTDSSIGDFHYALRIFDHIQQPSL 67
+ C ++ ++K +L GL ++ ++KL+ + + FHYA IFD I+ P+
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNS 78
Query: 68 FNYNVMIKAFAKKGSFRRAISLFQQL---REDGVWPDNYTYPYVLKAI--GCLGDVGQGR 122
F Y+ MI+ ++ + F + E+ + P T+ +++ A C VG +
Sbjct: 79 FVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVG--K 136
Query: 123 KVHAFVIKSGLEF-DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
++H +V+K+G+ D +V ++ +Y E L D +++F+E P D V W+++++G VRC
Sbjct: 137 QIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRC 196
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
E +E F+ M + E P+E +V + LTACA + GK IH ++
Sbjct: 197 GLGSEGLEVFKEMLVRGIE-PDEFSVTTALTACAQVGALAQGKWIHEFV 244
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD I QP + ++V++ + + G + +F+++ G+ PD ++ L A
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 115 LGDVGQGRKVHAFVIKS-GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
+G + QG+ +H FV K +E D +V +L+DMYA+ G + E+FE+ R+ SW
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAA 290
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+I G ++A R+ E KP+ ++ L ACA
Sbjct: 291 LIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACA 332
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 68/129 (52%), Gaps = 7/129 (5%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIG 113
A+ +F+ + + ++F++ +I +A G ++A + ++ REDG+ PD+ VL A
Sbjct: 273 AVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACA 332
Query: 114 CLGDVGQGRK-VHAFVIKSGL--EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
G + +GR + + G+ + + Y C ++D+ GRL D +L E+ P + S
Sbjct: 333 HGGFLEEGRTMLENMEARYGITPKHEHYSC--IVDLMCRAGRLDDALDLIEKMPMKPLAS 390
Query: 171 -WNIMISGC 178
W +++GC
Sbjct: 391 VWGALLNGC 399
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 37/246 (15%)
Query: 15 MCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMI 74
M +KQ+ A +G+ + +D L +L+ I + YA ++FDH Q F YN +I
Sbjct: 1 MNGIKQLHAHCLRTGVDETKDLLQRLLLIP------NLVYARKLFDHHQNSCTFLYNKLI 54
Query: 75 KAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLE 134
+A+ +I L+ L DG+ P ++T+ ++ A R +H+ +SG E
Sbjct: 55 QAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFE 114
Query: 135 FDAYVCNSLMDMYAELG----------------------------RLSDFK---ELFEET 163
D++ C +L+ YA+LG R D K ELF+
Sbjct: 115 SDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM 174
Query: 164 PDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
P ++ SW +ISG + + EA++ F M + KPN TVVS L ACA L E+G
Sbjct: 175 PRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 224 KEIHSY 229
+ + Y
Sbjct: 235 RRLEGY 240
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 3/168 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLRED-GVWPDNYTYPYV 108
GD A+ +FD + + ++ ++ +I F++ G++ A+ +F + +D V P++ T V
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
L A LG++ GR++ + ++G + YVCN+ ++MY++ G + K LFEE ++ N
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 169 V-SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ SWN MI + EA+ F +M E EKP+ T V L AC
Sbjct: 282 LCSWNSMIGSLATHGKHDEALTLFAQMLREG-EKPDAVTFVGLLLACV 328
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 14/184 (7%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKL----MAISTDSSIGDFHYALRIF 59
T +S+L +C ++ EL+ + L G ++ + + I S G A R+F
Sbjct: 217 TVVSVLPACANLGELEIGRRL---EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLF 273
Query: 60 DHI-QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
+ + Q +L ++N MI + A G A++LF Q+ +G PD T+ +L A G V
Sbjct: 274 EELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMV 333
Query: 119 GQGRKVHAF---VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR-DNVSWNIM 174
+G+++ V K + + Y C ++D+ +G+L + +L + P + D V W +
Sbjct: 334 VKGQELFKSMEEVHKISPKLEHYGC--MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTL 391
Query: 175 ISGC 178
+ C
Sbjct: 392 LGAC 395
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 2/224 (0%)
Query: 8 LLKSCKSMCELKQIQALI-FCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
L+K+C ++ K I L S L D + I G ++FD + Q
Sbjct: 144 LVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKD 203
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
+NVM+ +AK G+ I F +R D + P+ T+ VL + G ++H
Sbjct: 204 CVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHG 263
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
V+ SG++F+ + NSL+ MY++ GR D +LF D V+WN MISG V+ +E
Sbjct: 264 LVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEE 323
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++ FF M + S P+ T S L + + N E K+IH YI
Sbjct: 324 SLTFFYEM-ISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A IF + + MI + G + ++ +F+ L + + P+ T +L IG
Sbjct: 394 AQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGI 453
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
L + GR++H F+IK G + + +++DMYA+ GR++ E+FE RD VSWN M
Sbjct: 454 LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSM 513
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
I+ C + AI+ F++M + S + ++ + L+ACA L + GK IH ++
Sbjct: 514 ITRCAQSDNPSAAIDIFRQMGV-SGICYDCVSISAALSACANLPSESFGKAIHGFM 568
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 107/211 (50%), Gaps = 3/211 (1%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
Q+ L+ SG+ + N L+ S S G F A ++F + + +N MI + +
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLL--SMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 80 KGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYV 139
G +++ F ++ GV PD T+ +L ++ ++ +++H ++++ + D ++
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 140 CNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESK 199
++L+D Y + +S + +F + D V + MISG + + +++E F R ++ K
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMF-RWLVKVK 436
Query: 200 EKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
PNE T+VS L L ++G+E+H +I
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFI 467
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 90/174 (51%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G + A IF+ + + + ++N MI A+ + AI +F+Q+ G+ D + L
Sbjct: 490 GRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A L G+ +H F+IK L D Y ++L+DMYA+ G L +F+ +++ V
Sbjct: 550 SACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIV 609
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
SWN +I+ C + ++++ F M +S +P++ T + +++C + + + G
Sbjct: 610 SWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV--SWNIMISG 177
QG++VHAF+I + + D+Y ++ MYA G SD ++F R + WN +IS
Sbjct: 53 QGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISS 112
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
VR +A+ F+ +M + P+ +T + AC AL+N
Sbjct: 113 FVRNGLLNQALAFYFKM-LCFGVSPDVSTFPCLVKACVALKN 153
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 2/182 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A ++FD + + F +N MI A+ G A++L+ +R +GV ++P +L
Sbjct: 130 GSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALL 189
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR-DN 168
KA L D+ G ++H+ ++K G ++ N+L+ MYA+ LS + LF+ ++ D
Sbjct: 190 KACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDA 249
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
V WN ++S + E +E F+ M M + PN T+VS LTAC A++GKEIH+
Sbjct: 250 VLWNSILSSYSTSGKSLETLELFREMHM-TGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 229 YI 230
+
Sbjct: 309 SV 310
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 118/229 (51%), Gaps = 8/229 (3%)
Query: 7 SLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+LLK+C + +++ ++ +L+ G +N L+++ + D A R+FD Q
Sbjct: 187 ALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND--DLSAARRLFDGFQ 244
Query: 64 QPS-LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
+ +N ++ +++ G + LF+++ G P++YT L A G+
Sbjct: 245 EKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK 304
Query: 123 KVHAFVIKSGLE-FDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
++HA V+KS + YVCN+L+ MY G++ + + + + D V+WN +I G V+
Sbjct: 305 EIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQN 364
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++EA+EFF M + + K +E ++ S + A L N G E+H+Y+
Sbjct: 365 LMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYV 412
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 112/234 (47%), Gaps = 13/234 (5%)
Query: 4 TCISLLKSCK--SMCEL-KQIQALIFCSGLQQDRDTL-NKLMAISTDSSIGDFHYALRIF 59
T +S L +C S +L K+I A + S + N L+A+ T G A RI
Sbjct: 286 TIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYT--RCGKMPQAERIL 343
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ + +N +IK + + ++ A+ F + G D + ++ A G L ++
Sbjct: 344 RQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G ++HA+VIK G + + V N+L+DMY++ F D+D +SW +I+G
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 180 RCKRFQEAIEFFQ---RMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ EA+E F+ + RME +E + S L A + L++ + KEIH +I
Sbjct: 464 QNDCHVEALELFRDVAKKRME----IDEMILGSILRASSVLKSMLIVKEIHCHI 513
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 4/203 (1%)
Query: 13 KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNV 72
KSM +K+I I GL DT+ + + + YA R+F+ I+ + ++
Sbjct: 501 KSMLIVKEIHCHILRKGLL---DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 557
Query: 73 MIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSG 132
MI + A G+ A+ LF+++ E G+ D+ +L A L + +GR++H ++++ G
Sbjct: 558 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 133 LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
+ + +++DMYA G L K +F+ + + + MI+ + A+E F
Sbjct: 618 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFD 677
Query: 193 RMRMESKEKPNEATVVSTLTACA 215
+MR E+ P+ + ++ L AC+
Sbjct: 678 KMRHENV-SPDHISFLALLYACS 699
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Query: 104 TYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA-YVCNSLMDMYAELGRLSDFKELFEE 162
+ YVL+ G V QGR++H+ + K+ F+ ++ L+ MY + G L D +++F+E
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
PDR +WN MI V A+ + MR+E ++ + L ACA LR+
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV-PLGLSSFPALLKACAKLRDIRS 200
Query: 223 GKEIHSYI 230
G E+HS +
Sbjct: 201 GSELHSLL 208
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIG 113
Y R F + L ++ +I +A+ A+ LF+ + + + D +L+A
Sbjct: 439 YMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASS 498
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
L + +++H +++ GL D + N L+D+Y + + +FE +D VSW
Sbjct: 499 VLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTS 557
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
MIS EA+E F+RM +E+ + ++ L+A A+L G+EIH Y+
Sbjct: 558 MISSSALNGNESEAVELFRRM-VETGLSADSVALLCILSAAASLSALNKGREIHCYL 613
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD A +FD I++ L Y MI A+ G + A+ LF ++R + V PD+ ++ +L
Sbjct: 636 GDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALL 695
Query: 110 KAIGCLGDVGQGRKV-----HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFE--- 161
A G + +GR H + ++ E YVC L+DM LGR + E FE
Sbjct: 696 YACSHAGLLDEGRGFLKIMEHEYELEPWPEH--YVC--LVDM---LGRANCVVEAFEFVK 748
Query: 162 --ETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEK-PNEATVVSTLTA 213
+T V W +++ C R +E E + +E + K P +VS + A
Sbjct: 749 MMKTEPTAEV-WCALLAAC-RSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFA 801
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 112/215 (52%), Gaps = 10/215 (4%)
Query: 7 SLLKSCKSMCELKQIQALIF---CSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SL+ C LK +AL+ G++ D T N L S +++G AL + ++
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA--SGYATLGKPEKALDVIGKMK 353
Query: 64 Q----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ P++ ++ + +K G+FR A+ +F +++E+GV P+ T +LK +GCL +
Sbjct: 354 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 413
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G++VH F ++ L DAYV +L+DMY + G L E+F ++ SWN M+ G
Sbjct: 414 SGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYA 473
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
R +E I F M +E+ +P+ T S L+ C
Sbjct: 474 MFGRGEEGIAAFSVM-LEAGMEPDAITFTSVLSVC 507
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Query: 32 QDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAI 87
+DR+ + +S+ + +G A+ + D ++ +P + +N ++ +A KG + AI
Sbjct: 151 KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 88 SLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMY 147
++ ++++ G+ P + +L+A+ G + G+ +H +++++ L +D YV +L+DMY
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 148 AELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATV 207
+ G L + +F+ ++ V+WN ++SG ++A RM E KP+ T
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGI-KPDAITW 329
Query: 208 VSTLTACAALRNAE 221
S + A L E
Sbjct: 330 NSLASGYATLGKPE 343
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 101/212 (47%), Gaps = 36/212 (16%)
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIG 113
+A ++FD + + +N ++ + G++ +A+ LF++++ G + T +L+
Sbjct: 41 FANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCS 100
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR------- 166
+GR++H +V++ GLE + +CNSL+ MY+ G+L +++F DR
Sbjct: 101 NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNS 160
Query: 167 ----------------------------DNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
D V+WN ++SG ++AI +RM++ +
Sbjct: 161 ILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI-A 219
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
KP+ +++ S L A A + ++GK IH YI
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYI 251
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 2/111 (1%)
Query: 121 GRKVHAFVIKSGLE-FDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G +H +IK GL+ D V ++ M Y L +LF+E P RD+++WN ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
R +++A+E F+ M+ S K ++T+V L C+ G++IH Y+
Sbjct: 66 RSGNWEKAVELFREMQF-SGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYV 115
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 100/240 (41%), Gaps = 42/240 (17%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFR 84
GL+ D T N L+ S +S G A+ + +Q +PS + + +++A A+ G +
Sbjct: 185 GLKPDIVTWNSLL--SGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 85 RAISLFQQLREDGVWPDNYT-------------YPYV--------LKAIGCLGDVGQG-- 121
++ + + +W D Y PY K I + G
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 122 -----RKVHAFVI---KSGLEFDAYVCNSLMDMYAELGR----LSDFKELFEETPDRDNV 169
+ A +I K G++ DA NSL YA LG+ L ++ E+ + V
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
SW + SGC + F+ A++ F +M+ E PN AT+ + L L GKE+H +
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQ-EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGF 421
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 96/173 (55%), Gaps = 1/173 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++F+ +++ + +N MI+ +A G + + LF ++ G D++T+ +L
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
D+ G + H+ +IK L + +V N+L+DMYA+ G L D +++FE DRDNV+WN +
Sbjct: 441 SHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
I V+ + EA + F+RM + + A + STL AC + GK++H
Sbjct: 501 IGSYVQDENESEAFDLFKRMNL-CGIVSDGACLASTLKACTHVHGLYQGKQVH 552
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
Query: 55 ALRIFDHIQQP-SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIG 113
A +F + P S+ + M+ ++ G + A+ ++++R DGV PD T+ VL+
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN-VSWN 172
L + +GR +H+ + + D N+L+DMYA+ G + ++F+E R N VSWN
Sbjct: 744 VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWN 803
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+I+G + ++A++ F MR +S P+E T + LTAC+ G++I
Sbjct: 804 SLINGYAKNGYAEDALKIFDSMR-QSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 97/196 (49%), Gaps = 1/196 (0%)
Query: 35 DTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR 94
D L + I+T +G A +F + P + +NVMI K+G AI F +R
Sbjct: 260 DHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 95 EDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLS 154
+ V T VL AIG + ++ G VHA IK GL + YV +SL+ MY++ ++
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKME 379
Query: 155 DFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
++FE ++++V WN MI G + +E F M+ S ++ T S L+ C
Sbjct: 380 AAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK-SSGYNIDDFTFTSLLSTC 438
Query: 215 AALRNAEVGKEIHSYI 230
AA + E+G + HS I
Sbjct: 439 AASHDLEMGSQFHSII 454
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 3 GTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGD----------- 51
G C L KS K E+ Q AL G +L ++ I ++ +G+
Sbjct: 54 GQC-KLFKSRKVFDEMPQRLALALRIGKAVHSKSL--ILGIDSEGRLGNAIVDLYAKCAQ 110
Query: 52 FHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA 111
YA + FD +++ + +N M+ ++ G + + F L E+ ++P+ +T+ VL
Sbjct: 111 VSYAEKQFDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLST 169
Query: 112 IGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
+V GR++H +IK GLE ++Y +L+DMYA+ R+SD + +FE D + V W
Sbjct: 170 CARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCW 229
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEA--TVVSTLTACAALRNAEV 222
+ SG V+ +EA+ F+RMR E + A TV++T L++A +
Sbjct: 230 TCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARL 282
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 116/234 (49%), Gaps = 10/234 (4%)
Query: 3 GTCI-SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
G C+ S LK+C + L KQ+ L GL +D T + L I S G A ++
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL--IDMYSKCGIIKDARKV 586
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
F + + S+ + N +I +++ + A+ LFQ++ GV P T+ +++A +
Sbjct: 587 FSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESL 645
Query: 119 GQGRKVHAFVIKSGLEFDA-YVCNSLMDMYAELGRLSDFKELFEE-TPDRDNVSWNIMIS 176
G + H + K G + Y+ SL+ MY +++ LF E + + V W M+S
Sbjct: 646 TLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
G + ++EA++F++ MR + P++AT V+ L C+ L + G+ IHS I
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGV-LPDQATFVTVLRVCSVLSSLREGRAIHSLI 758
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 7/230 (3%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T SLL +C + +L+ Q ++I L ++ N L + + G A +IF+
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNAL--VDMYAKCGALEDARQIFE 487
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ +N +I ++ + + A LF+++ G+ D LKA + + Q
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G++VH +K GL+ D + +SL+DMY++ G + D +++F P+ VS N +I+G +
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+EA+ FQ M + P+E T + + AC + +G + H I
Sbjct: 608 -NNLEEAVVLFQEM-LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQI 655
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 2 KGTCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
+ T +++L+ C + L++ I +LIF L D D L I + GD + ++
Sbjct: 732 QATFVTVLRVCSVLSSLREGRAIHSLIF--HLAHDLDELTSNTLIDMYAKCGDMKGSSQV 789
Query: 59 FDHIQQPS-LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
FD +++ S + ++N +I +AK G A+ +F +R+ + PD T+ VL A G
Sbjct: 790 FDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGK 849
Query: 118 VGQGRKVHAFVI-KSGLEFDAYVCNSLMDMYAELGRLSDFKELFE-ETPDRDNVSWNIMI 175
V GRK+ +I + G+E ++D+ G L + + E + D W+ ++
Sbjct: 850 VSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLL 909
Query: 176 SGC 178
C
Sbjct: 910 GAC 912
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 97/177 (54%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A IF+ + + + + +I +A+ G A+ +F +L +G+ P+ TY +L
Sbjct: 202 GQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A+ L + G++ H V++ L F A + NSL+DMY++ G LS + LF+ P+R +
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAI 321
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
SWN M+ G + +E +E F+ MR E + KP+ T+++ L+ C+ R + G I
Sbjct: 322 SWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 378
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 101/177 (57%), Gaps = 3/177 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLF-QQLREDGVWPDNYTYPYVLKAIG 113
A ++ D + + ++ ++ MI +++ G A+++F + +R DG P+ +T+ VL +
Sbjct: 106 ARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGK-PNEFTFATVLTSCI 164
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
+G G+++H ++K + +V +SL+DMYA+ G++ + +E+FE P+RD VS
Sbjct: 165 RASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTA 224
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+I+G + +EA+E F R+ E PN T S LTA + L + GK+ H ++
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGM-SPNYVTYASLLTALSGLALLDHGKQAHCHV 280
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G++VHA +IK+ Y+ L+ Y + L D +++ +E P+++ VSW MIS +
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA+ F M M S KPNE T + LT+C +GK+IH I
Sbjct: 131 TGHSSEALTVFAEM-MRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLI 179
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 76/186 (40%), Gaps = 36/186 (19%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGVWPD 101
I S G+ YA R+FD++ + + ++N M+ ++K G R + LF+ +R E V PD
Sbjct: 296 IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPD 355
Query: 102 NYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLE-FDAYVCNSLMDMYAELGRLSDFKELF 160
T VL GC H + +GL FD V +
Sbjct: 356 AVTLLAVLS--GC---------SHGRMEDTGLNIFDGMVAGE-----------------Y 387
Query: 161 EETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA 220
P ++ + ++ R R EA EF +RM KP + S L AC +
Sbjct: 388 GTKPGTEH--YGCIVDMLGRAGRIDEAFEFIKRM----PSKPTAGVLGSLLGACRVHLSV 441
Query: 221 EVGKEI 226
++G+ +
Sbjct: 442 DIGESV 447
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 107 bits (267), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 9/229 (3%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+LLK+ + ++ KQI A ++ G D T+ + ++ GDF ++FD I
Sbjct: 102 ALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTL-VNLYRKCGDFGAVYKVFDRIS 160
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG---DVGQ 120
+ + ++N +I + + A+ F+ + ++ V P ++T V+ A L +
Sbjct: 161 ERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMM 220
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G++VHA+ ++ G E ++++ N+L+ MY +LG+L+ K L RD V+WN ++S +
Sbjct: 221 GKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQ 279
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
++ EA+E+ + M +E E P+E T+ S L AC+ L GKE+H+Y
Sbjct: 280 NEQLLEALEYLREMVLEGVE-PDEFTISSVLPACSHLEMLRTGKELHAY 327
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 100/184 (54%), Gaps = 11/184 (5%)
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLRED-GVWPDNYTYPYVLKAIGCL 115
R+FD + + +N MI +++ + A+ LF + E G+ ++ T V+ A
Sbjct: 359 RVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRS 418
Query: 116 GDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMI 175
G + +H FV+K GL+ D +V N+LMDMY+ LG++ +F + DRD V+WN MI
Sbjct: 419 GAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMI 478
Query: 176 SGCVRCKRFQEAIEFFQRMR-MESKE---------KPNEATVVSTLTACAALRNAEVGKE 225
+G V + ++A+ +M+ +E K KPN T+++ L +CAAL GKE
Sbjct: 479 TGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKE 538
Query: 226 IHSY 229
IH+Y
Sbjct: 539 IHAY 542
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+ I + GL +DR N LM + S +G A+RIF ++ L +N MI +
Sbjct: 425 EAIHGFVVKRGLDRDRFVQNTLMDMY--SRLGKIDIAMRIFGKMEDRDLVTWNTMITGYV 482
Query: 79 KKGSFRRAISLFQQLRE-----------DGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAF 127
A+ L +++ + P++ T +L + L + +G+++HA+
Sbjct: 483 FSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAY 542
Query: 128 VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEA 187
IK+ L D V ++L+DMYA+ G L +++F++ P ++ ++WN++I QEA
Sbjct: 543 AIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEA 602
Query: 188 IEFFQRMRMESKEKPNEATVVSTLTACA 215
I+ RM M KPNE T +S AC+
Sbjct: 603 IDLL-RMMMVQGVKPNEVTFISVFAACS 629
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 95/161 (59%), Gaps = 5/161 (3%)
Query: 73 MIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSG 132
++++ + R A+ + + G+ PDNY +P +LKA+ L D+ G+++HA V K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 133 LEFDAY-VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
D+ V N+L+++Y + G ++F+ +R+ VSWN +IS ++++ A+E F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 192 QRMRMESKEKPNEATVVSTLTACAALRNAE---VGKEIHSY 229
+ M E+ E P+ T+VS +TAC+ L E +GK++H+Y
Sbjct: 188 RCMLDENVE-PSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 82/165 (49%), Gaps = 1/165 (0%)
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
L +N ++ + + A+ +++ +GV PD +T VL A L + G+++HA
Sbjct: 267 LVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 127 FVIKSG-LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
+ +K+G L+ +++V ++L+DMY ++ + +F+ DR WN MI+G + + +
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA+ F M + N T+ + AC + IH ++
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFV 431
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 13/171 (7%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +++L SC ++ L K+I A + L D + L + + G + ++FD
Sbjct: 519 TLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSAL--VDMYAKCGCLQMSRKVFD 576
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I Q ++ +NV+I A+ G+ + AI L + + GV P+ T+ V A G V +
Sbjct: 577 QIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDE 636
Query: 121 GRKVHAFVIKS--GLE--FDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
G ++ +V+K G+E D Y C ++D+ GR+ + +L P RD
Sbjct: 637 GLRIF-YVMKPDYGVEPSSDHYAC--VVDLLGRAGRIKEAYQLMNMMP-RD 683
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 120/233 (51%), Gaps = 14/233 (6%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
++++ C S ++KQ+Q+ +G Q ++L+ S GD +A++IF +I +P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWP------DNYTYPYVLKAIG---CLGD 117
++N +I+ FA A S ++ + + D T + LKA C
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
+ Q +H + + GL D+ +C +L+D Y++ G L +LF+E P RD SWN +I+G
Sbjct: 128 MDQ---LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI-HSY 229
V R EA+E ++RM E + +E TVV+ L AC+ L + + G+ I H Y
Sbjct: 185 LVSGNRASEAMELYKRMETEGIRR-SEVTVVAALGACSHLGDVKEGENIFHGY 236
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 4 TCISLLKSC-KSMCE--LKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
TC LK+C +++C + Q+ I GL D L+ S GD A ++FD
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLL--DAYSKNGDLISAYKLFD 168
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + ++N +I A+ L++++ +G+ T L A LGDV +
Sbjct: 169 EMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKE 228
Query: 121 GRKV-HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE-TPDRDNVSWNIMISGC 178
G + H + + V N+ +DMY++ G + ++FE+ T + V+WN MI+G
Sbjct: 229 GENIFHGYS-----NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGF 283
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
A+E F ++ ++ KP++ + ++ LTAC
Sbjct: 284 AVHGEAHRALEIFDKLE-DNGIKPDDVSYLAALTAC 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
T ++ L +C + ++K+ + + G D ++ AI S G A ++F+
Sbjct: 212 TVVAALGACSHLGDVKEGENIFH--GYSNDNVIVSN-AAIDMYSKCGFVDKAYQVFEQFT 268
Query: 64 -QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
+ S+ +N MI FA G RA+ +F +L ++G+ PD+ +Y L A G V G
Sbjct: 269 GKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGL 328
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF 160
V + G+E + ++D+ + GRL + ++
Sbjct: 329 SVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDII 366
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 117/228 (51%), Gaps = 8/228 (3%)
Query: 4 TCISLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
TCI+ L+ C K +QI + G D + ++ + G A+ +F
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSL-VNMYAKCGLMRRAVLVFG 120
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++ +F YN +I F GS A+ ++++R +G+ PD YT+P +LK + ++
Sbjct: 121 GSER-DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAM-ELSD 178
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN-VSWNIMISGCV 179
+KVH K G + D YV + L+ Y++ + D +++F+E PDRD+ V WN +++G
Sbjct: 179 VKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYS 238
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ RF++A+ F +MR E + T+ S L+A + + G+ IH
Sbjct: 239 QIFRFEDALLVFSKMR-EEGVGVSRHTITSVLSAFTVSGDIDNGRSIH 285
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 115/234 (49%), Gaps = 10/234 (4%)
Query: 2 KGTCISLLKSCKSM--CELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
K T SLLK +M ++K++ L F G D + L +++ S A ++F
Sbjct: 161 KYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDCYVGSGL--VTSYSKFMSVEDAQKVF 218
Query: 60 DHI-QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
D + + +N ++ +++ F A+ +F ++RE+GV +T VL A GD+
Sbjct: 219 DELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDI 278
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
GR +H +K+G D V N+L+DMY + L + +FE +RD +WN ++ C
Sbjct: 279 DNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVL--C 336
Query: 179 VR--CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
V C + F+RM + S +P+ T+ + L C L + G+EIH Y+
Sbjct: 337 VHDYCGDHDGTLALFERM-LCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYM 389
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A IF+ + + LF +N ++ G ++LF+++ G+ PD T VL G
Sbjct: 316 ANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGR 375
Query: 115 LGDVGQGRKVHAFVIKSGL----EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
L + QGR++H ++I SGL + ++ NSLMDMY + G L D + +F+ +D+ S
Sbjct: 376 LASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS 435
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
WNIMI+G + A++ F M + KP+E T V L AC+
Sbjct: 436 WNIMINGYGVQSCGELALDMFSCM-CRAGVKPDEITFVGLLQACS 479
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 4 TCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDT----LNKLMAISTDSSIGDFHYAL 56
T ++L +C + L+Q I + SGL + + N LM + GD A
Sbjct: 365 TLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYV--KCGDLRDAR 422
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG 116
+FD ++ ++N+MI + + A+ +F + GV PD T+ +L+A G
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 117 DVGQGRKVHA---FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN-VSWN 172
+ +GR A V D Y C ++DM +L + EL P DN V W
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYAC--VIDMLGRADKLEEAYELAISKPICDNPVVWR 540
Query: 173 IMISGC 178
++S C
Sbjct: 541 SILSSC 546
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 35/219 (15%)
Query: 9 LKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLF 68
L C ++ ++KQ+ A I L +D KL IS S + A+R+F+ +Q+P++
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKL--ISALSLCRQTNLAVRVFNQVQEPNVH 83
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFV 128
N +I+A A+ +A +F +++ G++ DN+TYP++LKA + + +H +
Sbjct: 84 LCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHI 143
Query: 129 IKSGLEFDAYVCNSLMDMYA---------------------------------ELGRLSD 155
K GL D YV N+L+D Y+ + G L D
Sbjct: 144 EKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRD 203
Query: 156 FKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
+ LF+E P RD +SWN M+ G RC+ +A E F++M
Sbjct: 204 ARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM 242
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS--LFNYNVMIKAFAKKGSFRRAISLF 90
+R+T++ + S GD A +FD + P+ + + ++I +A+KG + A L
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 91 QQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAEL 150
Q+ G+ D +L A G + G ++H+ + +S L +AYV N+L+DMYA+
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKC 363
Query: 151 GRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVST 210
G L ++F + P +D VSWN M+ G +EAIE F RMR E +P++ T ++
Sbjct: 364 GNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI-RPDKVTFIAV 422
Query: 211 LTAC 214
L +C
Sbjct: 423 LCSC 426
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 19/224 (8%)
Query: 3 GTCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
IS+L +C L +I +++ S L + LN L+ + + G+ A +F
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY--AKCGNLKKAFDVF 373
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ I + L ++N M+ G + AI LF ++R +G+ PD T+ VL + G +
Sbjct: 374 NDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLID 433
Query: 120 QG-------RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-W 171
+G KV+ V + + Y C L+D+ +GRL + ++ + P NV W
Sbjct: 434 EGIDYFYSMEKVYDLVP----QVEHYGC--LVDLLGRVGRLKEAIKVVQTMPMEPNVVIW 487
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
++ C A E + P +++S + A A
Sbjct: 488 GALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAA 531
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 79/170 (46%), Gaps = 14/170 (8%)
Query: 58 IFDHIQQPSL----FNYNVMIKAFAKKGSF--RRAISLFQQLREDGVWPDNYTYPYVLKA 111
+ +HI++ L + N +I +++ G R A+ LF+++ E D ++ +L
Sbjct: 139 MHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGG 194
Query: 112 IGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
+ G++ R++ + D N+++D YA +S ELFE+ P+R+ VSW
Sbjct: 195 LVKAGELRDARRL----FDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSW 250
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAE 221
+ M+ G + + A F +M + +K +++ L+ A+
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEAD 300
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T + +L +C +C L KQ+ + + G + R + + G A + FD
Sbjct: 324 TIVGVLNACSDICYLEEGKQLHSFLLKLGFE--RHLFATTALVDMYAKAGCLADARKGFD 381
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+Q+ + + +I + + A+ L+++++ G+ P++ T VLKA L +
Sbjct: 382 CLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLEL 441
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G++VH IK G + + ++L MY++ G L D +F TP++D VSWN MISG
Sbjct: 442 GKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSH 501
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ EA+E F+ M E E P++ T V+ ++AC+
Sbjct: 502 NGQGDEALELFEEMLAEGME-PDDVTFVNIISACS 535
Score = 103 bits (257), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 100/175 (57%), Gaps = 1/175 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD + ++ M+ +++ G A+ LF ++ G+ P YT VL A
Sbjct: 275 ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ + +G+++H+F++K G E + +L+DMYA+ G L+D ++ F+ +RD W +
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSL 394
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
ISG V+ +EA+ ++RM+ + PN+ T+ S L AC++L E+GK++H +
Sbjct: 395 ISGYVQNSDNEEALILYRRMKT-AGIIPNDPTMASVLKACSSLATLELGKQVHGH 448
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 105/179 (58%), Gaps = 5/179 (2%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAI---SLFQQLREDGVWPDNYTYPYVLKA 111
L++F ++ + + + ++ M+ +A +G AI +LF + +E+G D Y + VL +
Sbjct: 172 GLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSS 230
Query: 112 IGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
+ VG GR++H IK+GL + N+L+ MY++ L++ ++F+ + DR++++W
Sbjct: 231 LAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITW 290
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ M++G + EA++ F RM + KP+E T+V L AC+ + E GK++HS++
Sbjct: 291 SAMVTGYSQNGESLEAVKLFSRM-FSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL 348
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 91/182 (50%), Gaps = 4/182 (2%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRA---ISLFQQLREDGVWPDNYTYP 106
G A IF+ I + ++N +I +++ G + + LF+++R + P+ YT
Sbjct: 63 GKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLA 122
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
+ KA L GR+ HA V+K D YV SL+ MY + G + D ++F P+R
Sbjct: 123 GIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATV-VSTLTACAALRNAEVGKE 225
+ +W+ M+SG R +EAI+ F E +E + V + L++ AA +G++
Sbjct: 183 NTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQ 242
Query: 226 IH 227
IH
Sbjct: 243 IH 244
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 12/226 (5%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+LK+C S+ L KQ+ G + + L + S G +F
Sbjct: 425 TMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMY--SKCGSLEDGNLVFR 482
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ ++N MI + G A+ LF+++ +G+ PD+ T+ ++ A G V +
Sbjct: 483 RTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVER 542
Query: 121 GR-KVHAFVIKSGLE--FDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMIS 176
G + + GL+ D Y C ++D+ + G+L + KE E D W I++S
Sbjct: 543 GWFYFNMMSDQIGLDPKVDHYAC--MVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLS 600
Query: 177 GCVRCKRFQEAIEFFQR-MRMESKEKPNEATVVSTLTACAALRNAE 221
C + + + ++ M + S+E + TA +R+ E
Sbjct: 601 ACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVE 646
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
GR VH +I++G N L++ YA+ G+L+ +F +D VSWN +I+G +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 181 CKRFQEA---IEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ ++ F+ MR + PN T+ A ++L+++ VG++ H+ +
Sbjct: 93 NGGISSSYTVMQLFREMRAQDI-LPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 123/223 (55%), Gaps = 5/223 (2%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
I+ L+SC+ E+ +I + +GL +D ++KL+A S S+ D YA IF+H+
Sbjct: 32 INDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFS---SVLDIRYASSIFEHVSNT 88
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+LF +N MI+ ++ RA S+F QLR G+ D +++ LK+ V G +H
Sbjct: 89 NLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLH 148
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR-DNVSWNIMISGCVRCKRF 184
++SG + N+L+ Y G++SD +++F+E P D V+++ +++G ++ +
Sbjct: 149 GIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKK 208
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
A++ F+ MR +S+ N +T++S L+A + L + + H
Sbjct: 209 ALALDLFRIMR-KSEVVVNVSTLLSFLSAISDLGDLSGAESAH 250
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 4 TCISLLKSCKSMCELKQIQ-ALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
T +S L + + +L + A + C + D D I G A RIFD
Sbjct: 229 TLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCA 288
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
+ + +N MI +AK G + L +Q++ + + P++ T+ +L + GR
Sbjct: 289 IRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGR 348
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
V + + + DA + +L+DMYA++G L E+F D+D SW MISG
Sbjct: 349 TVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHG 408
Query: 183 RFQEAIEFFQRMRMES-KEKPNEATVVSTLTACA 215
+EA+ F +M E+ K +PNE T + L AC+
Sbjct: 409 LAREAVTLFNKMEEENCKVRPNEITFLVVLNACS 442
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 6 ISLLKSC-KSMCEL--KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
I+ LKSC + +C + + + SG D N L I G A ++FD +
Sbjct: 129 ITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNAL--IHFYCVCGKISDARKVFDEM 186
Query: 63 QQP-SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
Q ++ ++ + + A+ LF+ +R+ V + T L AI LGD+
Sbjct: 187 PQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGA 246
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
H IK GL+ D ++ +L+ MY + G +S + +F+ +D V+WN MI +
Sbjct: 247 ESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKT 306
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+E + ++M+ E K KPN +T V L++CA A VG+ +
Sbjct: 307 GLLEECVWLLRQMKYE-KMKPNSSTFVGLLSSCAYSEAAFVGRTV 350
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 116/214 (54%), Gaps = 3/214 (1%)
Query: 17 ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKA 76
E K I L+ D LN L I+ S G A ++FD + + SL ++N MI
Sbjct: 79 EAKACHGKIIRIDLEGDVTLLNVL--INAYSKCGFVELARQVFDGMLERSLVSWNTMIGL 136
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFD 136
+ + A+ +F ++R +G +T VL A G D + +K+H +K+ ++ +
Sbjct: 137 YTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLN 196
Query: 137 AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRM 196
YV +L+D+YA+ G + D ++FE D+ +V+W+ M++G V+ K ++EA+ ++R +
Sbjct: 197 LYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQR 256
Query: 197 ESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
S E+ N+ T+ S + AC+ L GK++H+ I
Sbjct: 257 MSLEQ-NQFTLSSVICACSNLAALIEGKQMHAVI 289
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A+++F+ +Q S ++ M+ + + ++ A+ L+++ + + + +T V+ A
Sbjct: 216 AVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSN 275
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
L + +G+++HA + KSG + +V +S +DMYA+ G L + +F E +++ WN +
Sbjct: 276 LAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTI 335
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
ISG + R +E + F++M+ + PNE T S L+ C E G+
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMH-PNEVTFSSLLSVCGHTGLVEEGR 384
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 87/180 (48%), Gaps = 7/180 (3%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S++ +C ++ L KQ+ A+I SG + + A+ + G + IF
Sbjct: 265 TLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS--AVDMYAKCGSLRESYIIFS 322
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+Q+ +L +N +I FAK + + LF+++++DG+ P+ T+ +L G G V +
Sbjct: 323 EVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEE 382
Query: 121 GRKVHAFVIKS-GLEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISGC 178
GR+ + + GL + + ++D+ G LS+ EL + P D W +++ C
Sbjct: 383 GRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASC 442
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPY--------VLKAIGCLGDVGQGRKVHAFVI 129
+ S R IS+ ++ V P Y+ + +L+ G V + + H +I
Sbjct: 29 SNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHGKII 88
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIE 189
+ LE D + N L++ Y++ G + +++F+ +R VSWN MI R + EA++
Sbjct: 89 RIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALD 148
Query: 190 FFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
F MR E K +E T+ S L+AC +A K++H
Sbjct: 149 IFLEMRNEGF-KFSEFTISSVLSACGVNCDALECKKLH 185
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 55/273 (20%)
Query: 9 LKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAI----STDSSIGDFHYALRIFDHIQQ 64
+ +C+++ +L QI A+ SG Q RDTL + ++D D YA +IF+ + Q
Sbjct: 30 INNCRTIRDLSQIHAVFIKSG--QMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQ 87
Query: 65 PSLFNYNVMIKAFAKKGSFRR--AISLFQQLREDG-VWPDNYTYPYVLKAIGCLGDVGQG 121
+ F++N +I+ F++ + AI+LF ++ D V P+ +T+P VLKA G + +G
Sbjct: 88 RNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEG 147
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELG------------------------------ 151
+++H +K G D +V ++L+ MY G
Sbjct: 148 KQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGE 207
Query: 152 ------------RLSDFKE---LFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRM 196
RL D K LF++ R VSWN MISG F++A+E F+ M+
Sbjct: 208 IVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK- 266
Query: 197 ESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+ +PN T+VS L A + L + E+G+ +H Y
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLY 299
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 101/180 (56%), Gaps = 1/180 (0%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+GD A +FD ++Q S+ ++N MI ++ G F+ A+ +F+++++ + P+ T V
Sbjct: 221 LGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSV 280
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
L AI LG + G +H + SG+ D + ++L+DMY++ G + +FE P +
Sbjct: 281 LPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
++W+ MI+G + +AI+ F +MR ++ +P++ ++ LTAC+ E G+ S
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMR-QAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 11/217 (5%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
Q+ A I ++ D +KL++ T F AL +FD I + F+YN ++ A+
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQD--RFRQALHVFDEITVRNAFSYNALLIAYTS 100
Query: 80 KGSFRRAISLFQQ------LREDGVWPDNYTYPYVLKAIGCLGDVGQG---RKVHAFVIK 130
+ + A SLF D PD+ + VLKA+ D G R+VH FVI+
Sbjct: 101 REMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIR 160
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEF 190
G + D +V N ++ Y + + +++F+E +RD VSWN MISG + F++ +
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 191 FQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
++ M S KPN TV+S AC + G E+H
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVH 257
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 108/243 (44%), Gaps = 35/243 (14%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+Q+ + G D N ++ T + A ++FD + + + ++N MI ++
Sbjct: 152 RQVHGFVIRGGFDSDVFVGNGMITYYTKCD--NIESARKVFDEMSERDVVSWNSMISGYS 209
Query: 79 KKGSFRRAISLFQQLRE-DGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
+ GSF +++ + P+ T V +A G D+ G +VH +I++ ++ D
Sbjct: 210 QSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDL 269
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNV---------------------------- 169
+CN+++ YA+ G L + LF+E ++D+V
Sbjct: 270 SLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESI 329
Query: 170 ---SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+WN MISG ++ +E I F+ M + +PN T+ S L + N + GKEI
Sbjct: 330 GLSTWNAMISGLMQNNHHEEVINSFREM-IRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI 388
Query: 227 HSY 229
H++
Sbjct: 389 HAF 391
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 1/194 (0%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
++D++ IS + G A+ +F ++ L +N MI + I+ F++
Sbjct: 297 EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFRE 356
Query: 93 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR 152
+ G P+ T +L ++ ++ G+++HAF I++G + + YV S++D YA+LG
Sbjct: 357 MIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGF 416
Query: 153 LSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
L + +F+ DR ++W +I+ A F +M+ KP++ T+ + L+
Sbjct: 417 LLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGT-KPDDVTLTAVLS 475
Query: 213 ACAALRNAEVGKEI 226
A A ++++ + I
Sbjct: 476 AFAHSGDSDMAQHI 489
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
Query: 18 LKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAF 77
L+ + + I L+ + KLM +S+ D A ++FD I + ++ NVMI+++
Sbjct: 58 LRTVHSRIILEDLRCNSSLGVKLM--RAYASLKDVASARKVFDEIPERNVIIINVMIRSY 115
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
G + + +F + V PD+YT+P VLKA C G + GRK+H K GL
Sbjct: 116 VNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTL 175
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
+V N L+ MY + G LS+ + + +E RD VSWN ++ G + +RF +A+E + ME
Sbjct: 176 FVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR--EME 233
Query: 198 SKEKPNEATVVSTL 211
S + ++A +++L
Sbjct: 234 SVKISHDAGTMASL 247
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 99/195 (50%), Gaps = 1/195 (0%)
Query: 30 LQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISL 89
+ D T+ L+ ++++ + Y +F + + SL ++NVMI + K A+ L
Sbjct: 237 ISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
+ ++ DG PD + VL A G + G+K+H ++ + L + + N+L+DMYA+
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAK 356
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
G L +++FE RD VSW MIS R +A+ F +++ +S P+ V+
Sbjct: 357 CGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ-DSGLVPDSIAFVT 415
Query: 210 TLTACAALRNAEVGK 224
TL AC+ E G+
Sbjct: 416 TLAACSHAGLLEEGR 430
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Query: 68 FNYNVMIKAFAKKGSF--RRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
N ++ + F K F R+ S +L D P + + + + D+ R VH
Sbjct: 4 INVDLHLLHFPKFRKFQSRKVSSSLPKLELDQKSPQETVF-LLGQVLDTYPDIRTLRTVH 62
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
+ +I L ++ + LM YA L ++ +++F+E P+R+ + N+MI V +
Sbjct: 63 SRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYG 122
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
E ++ F M +P+ T L AC+ +G++IH
Sbjct: 123 EGVKVFGTM-CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIH 163
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 114/224 (50%), Gaps = 3/224 (1%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ- 64
+ +L+ C SM +L++I + + +GLQ N L+ S G +A +FDH
Sbjct: 9 VRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSD 68
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVW-PDNYTYPYVLKAIGCLGDVGQGRK 123
PS ++N +I+ F+ S +I + ++ V PD +T+ + LK+ + + + +
Sbjct: 69 PSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLE 128
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H VI+SG DA V SL+ Y+ G + ++F+E P RD VSWN+MI
Sbjct: 129 IHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGL 188
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+A+ ++RM E + T+V+ L++CA + +G +H
Sbjct: 189 HNQALSMYKRMGNEGV-CGDSYTLVALLSSCAHVSALNMGVMLH 231
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 103/210 (49%), Gaps = 6/210 (2%)
Query: 9 LKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
LKSC KS+ + +I + SG D L + S+ G A ++FD +
Sbjct: 114 LKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSL--VRCYSANGSVEIASKVFDEMPVR 171
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
L ++NVMI F+ G +A+S+++++ +GV D+YT +L + + + G +H
Sbjct: 172 DLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH 231
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
E +V N+L+DMYA+ G L + +F RD ++WN MI G
Sbjct: 232 RIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGV 291
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACA 215
EAI FF++M + S +PN T + L C+
Sbjct: 292 EAISFFRKM-VASGVRPNAITFLGLLLGCS 320
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 4/176 (2%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLF-QQLREDGVWPDNYTYPYVLKAIGCLG 116
+FD ++ +LF +N +I ++++ + + F + + + PD++TYP V+KA +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
DVG G VH V+K+GL D +V N+L+ Y G ++D +LF+ P+R+ VSWN MI
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEK---PNEATVVSTLTACAALRNAEVGKEIHSY 229
+E+ M E+ + P+ AT+V+ L CA R +GK +H +
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGW 317
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 107/214 (50%), Gaps = 6/214 (2%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T SLL +C + L K++ I + L+ RD L +S G+ +FD
Sbjct: 498 TVCSLLSACSKLKSLRLGKEVHGFIIRNWLE--RDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++ SL ++N +I + + G RA+ +F+Q+ G+ + V A L +
Sbjct: 556 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 615
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
GR+ HA+ +K LE DA++ SL+DMYA+ G ++ ++F ++ SWN MI G
Sbjct: 616 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 675
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
+EAI+ F+ M+ + P++ T + LTAC
Sbjct: 676 HGLAKEAIKLFEEMQ-RTGHNPDDLTFLGVLTAC 708
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 111/208 (53%), Gaps = 5/208 (2%)
Query: 25 IFCSGLQQDRDTLNKLMA---ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKG 81
+ C L+Q+ N+L+A +++ + G YA R+F I+ ++ ++N +I A+
Sbjct: 417 LHCYSLKQEF-VYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 82 SFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCN 141
R ++ Q++ G+ PD++T +L A L + G++VH F+I++ LE D +V
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 142 SLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEK 201
S++ +Y G L + LF+ D+ VSWN +I+G ++ A+ F++M + +
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 202 PNEATVVSTLTACAALRNAEVGKEIHSY 229
+++ AC+ L + +G+E H+Y
Sbjct: 596 CG-ISMMPVFGACSLLPSLRLGREAHAY 622
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 116/231 (50%), Gaps = 12/231 (5%)
Query: 8 LLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAI-STDSSIGDFHYALRIFDHIQ 63
++K+C M ++ + L+ +GL +D N L++ T + D AL++FD +
Sbjct: 193 VIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTD---ALQLFDIMP 249
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLRE---DGVW-PDNYTYPYVLKAIGCLGDVG 119
+ +L ++N MI+ F+ G + L ++ E DG + PD T VL ++G
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G+ VH + +K L+ + + N+LMDMY++ G +++ + +F+ +++ VSWN M+ G
Sbjct: 310 LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 369
Query: 180 RCKRFQEAIEFFQRMRMESKE-KPNEATVVSTLTACAALRNAEVGKEIHSY 229
+ ++M ++ K +E T+++ + C KE+H Y
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%), Gaps = 9/181 (4%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG--VWPDNYTYPYVLKAI 112
A IF ++ ++N M+ F+ +G + +Q+ G V D T +L A+
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVT---ILNAV 402
Query: 113 G-CLGD--VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
C + + +++H + +K ++ V N+ + YA+ G LS + +F +
Sbjct: 403 PVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVN 462
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
SWN +I G + + +++ +M++ S P+ TV S L+AC+ L++ +GKE+H +
Sbjct: 463 SWNALIGGHAQSNDPRLSLDAHLQMKI-SGLLPDSFTVCSLLSACSKLKSLRLGKEVHGF 521
Query: 230 I 230
I
Sbjct: 522 I 522
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 108 VLKAIGCLGDVGQGRKVHAFVIKSG-LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
+L+A G D+ GRK+H V S L D +C ++ MYA G D + +F+ +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ WN +IS R + + E +E F M + P+ T + ACA + + +G +
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 227 HSYI 230
H +
Sbjct: 210 HGLV 213
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G + ++F+ +++ S ++N MI + G + AI LF++++ G PD+ T+ VL
Sbjct: 646 GSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVL 705
Query: 110 KAIGCLGDVGQGRKV-----HAFVIKSGLEFDAYVCNSLMDMYAELGRLSD-FKELFEET 163
A G + +G + +F +K L+ Y C ++DM G+L + + EE
Sbjct: 706 TACNHSGLIHEGLRYLDQMKSSFGLKPNLKH--YAC--VIDMLGRAGQLDKALRVVAEEM 761
Query: 164 PDRDNVS-WNIMISGCVRCKRFQEAIEFFQRMRME----SKEKPNEATVVSTLTA 213
+ +V W ++S C R + +E +++ + EKP ++S L A
Sbjct: 762 SEEADVGIWKSLLSSC----RIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYA 812
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 97/184 (52%), Gaps = 1/184 (0%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
+R ++ I+ + G+ A +FD + + + ++NVMI +A+ G A+ LFQ+
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 93 LREDG-VWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELG 151
L +G PD T L A +G + GR +H FV S + + VC L+DMY++ G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 152 RLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
L + +F +TP +D V+WN MI+G Q+A+ F M+ + +P + T + TL
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 212 TACA 215
ACA
Sbjct: 369 QACA 372
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 116/255 (45%), Gaps = 36/255 (14%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQ-QDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
L+ +S+ E+ QI A I L R + L +S G ++L +F P
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPD 94
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
LF + I + G +A L+ QL + P+ +T+ +LK+ C G+ +H
Sbjct: 95 LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKS--C--STKSGKLIHT 150
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR-------------------- 166
V+K GL D YV L+D+YA+ G + +++F+ P+R
Sbjct: 151 HVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEA 210
Query: 167 -----------DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
D VSWN+MI G + +A+ FQ++ E K KP+E TVV+ L+AC+
Sbjct: 211 ARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS 270
Query: 216 ALRNAEVGKEIHSYI 230
+ E G+ IH ++
Sbjct: 271 QIGALETGRWIHVFV 285
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 4 TCISLLKSCKSMCEL----KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
T +S+L +C +L K + A I +G + D N L I+ + GD + +F
Sbjct: 448 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSL--ITMYAKCGDLSSSQDLF 505
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ + ++ +N M+ A A G + L ++R GV D +++ L A L +
Sbjct: 506 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 565
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
+G+++H +K G E D+++ N+ DMY++ G + + ++ + +R SWNI+IS
Sbjct: 566 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 625
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
R F+E F M +E KP T VS LTAC+
Sbjct: 626 RHGYFEEVCATFHEM-LEMGIKPGHVTFVSLLTACS 660
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+QI + SGL+ N L IS S+G+ YA IFD + + ++N + A+A
Sbjct: 163 RQIIGQVVKSGLESKLAVENSL--ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 220
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G + +F +R ++ T +L +G + GR +H V+K G +
Sbjct: 221 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 280
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
VCN+L+ MYA GR + +F++ P +D +SWN +++ V R +A+ M + S
Sbjct: 281 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISS 339
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ N T S L AC E G+ +H +
Sbjct: 340 GKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 21 IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKK 80
+ L+ SGL ++ N L +S IG+ + R+ + + + +N +I +A+
Sbjct: 367 LHGLVVVSGLFYNQIIGNAL--VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 424
Query: 81 GSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD-VGQGRKVHAFVIKSGLEFDAYV 139
+A++ FQ +R +GV + T VL A GD + +G+ +HA+++ +G E D +V
Sbjct: 425 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 484
Query: 140 CNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESK 199
NSL+ MYA+ G LS ++LF +R+ ++WN M++ +E ++ +MR
Sbjct: 485 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFG 543
Query: 200 EKPNEATVVSTLTACAALRNAEVGKEIH 227
++ + L+A A L E G+++H
Sbjct: 544 VSLDQFSFSEGLSAAAKLAVLEEGQQLH 571
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+F + L ++N ++ +F G A+ L + G + T+ L A
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
+GR +H V+ SGL ++ + N+L+ MY ++G +S+ + + + P RD V+WN +I G
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN-AEVGKEIHSYI 230
+ +A+ FQ MR+E N TVVS L+AC + E GK +H+YI
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSS-NYITVVSVLSACLLPGDLLERGKPLHAYI 473
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 2/159 (1%)
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV-GQGRKVHAF 127
++N M+ + G + + F+++ + G+ P ++ ++ A G G + +G +VH F
Sbjct: 8 SWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 67
Query: 128 VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEA 187
V KSGL D YV +++ +Y G +S +++FEE PDR+ VSW ++ G +E
Sbjct: 68 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 127
Query: 188 IEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
I+ ++ MR E NE ++ +++C L++ +G++I
Sbjct: 128 IDIYKGMRGEGV-GCNENSMSLVISSCGLLKDESLGRQI 165
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG 116
++F+ + ++ ++ ++ ++ KG I +++ +R +GV + + V+ + G L
Sbjct: 98 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 157
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
D GR++ V+KSGLE V NSL+ M +G + +F++ +RD +SWN + +
Sbjct: 158 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 217
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ +E+ F MR ++ N TV + L+ + + + G+ IH +
Sbjct: 218 AYAQNGHIEESFRIFSLMR-RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 270
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 17 ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKA 76
E +Q+ L G + D N A S G+ +++ SL ++N++I A
Sbjct: 566 EGQQLHGLAVKLGFEHDSFIFNA--AADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS-GLEF 135
+ G F + F ++ E G+ P + T+ +L A G V +G + + + GLE
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 683
Query: 136 DAYVCNSLMDMYAELGRLSDFKELFEETPDRDN-VSWNIMISGC 178
C ++D+ GRL++ + + P + N + W +++ C
Sbjct: 684 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASC 727
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 11/224 (4%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
+L + C ++ K + A + S Q+ KL ++ +G+ A FDHIQ
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKL--VNLYCYLGNVALARHTFDHIQNRD 116
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQ-LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
++ +N+MI + + G+ I F + G+ PD T+P VLKA + D G K+H
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIH 173
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
+K G +D YV SL+ +Y+ + + + LF+E P RD SWN MISG + +
Sbjct: 174 CLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
EA+ +R + TVVS L+AC + G IHSY
Sbjct: 234 EALTLSNGLR-----AMDSVTVVSLLSACTEAGDFNRGVTIHSY 272
Score = 103 bits (257), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 113/229 (49%), Gaps = 8/229 (3%)
Query: 4 TCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +SLL +C + + I + GL+ + NKL+ + + G ++FD
Sbjct: 249 TVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAE--FGRLRDCQKVFD 306
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ L ++N +IKA+ RAISLFQ++R + PD T + + LGD+
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366
Query: 121 GRKVHAFVIKSG--LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
R V F ++ G LE D + N+++ MYA+LG + + +F P+ D +SWN +ISG
Sbjct: 367 CRSVQGFTLRKGWFLE-DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGY 425
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ EAIE + M E + N+ T VS L AC+ G ++H
Sbjct: 426 AQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLH 474
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 117/224 (52%), Gaps = 9/224 (4%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAI-STDSSIGDFHYALRIFDHIQQP 65
S+LK+C+++ + +I L G D L+ + S ++G+ A +FD +
Sbjct: 158 SVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGN---ARILFDEMPVR 214
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ ++N MI + + G+ + A++L LR D+ T +L A GD +G +H
Sbjct: 215 DMGSWNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIH 270
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
++ IK GLE + +V N L+D+YAE GRL D +++F+ RD +SWN +I ++
Sbjct: 271 SYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPL 330
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
AI FQ MR+ S+ +P+ T++S + + L + + + +
Sbjct: 331 RAISLFQEMRL-SRIQPDCLTLISLASILSQLGDIRACRSVQGF 373
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 15/221 (6%)
Query: 5 CISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTD-----SSIGDFHYALRIF 59
C++L+ + +L I+A G + + + I + +G A +F
Sbjct: 348 CLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVF 407
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG-VWPDNYTYPYVLKAIGCLGDV 118
+ + + ++N +I +A+ G AI ++ + E+G + + T+ VL A G +
Sbjct: 408 NWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGAL 467
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
QG K+H ++K+GL D +V SL DMY + GRL D LF + P ++V WN +I+
Sbjct: 468 RQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA-- 525
Query: 179 VRCKRF----QEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
C F ++A+ F+ M ++ KP+ T V+ L+AC+
Sbjct: 526 --CHGFHGHGEKAVMLFKEM-LDEGVKPDHITFVTLLSACS 563
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 7/182 (3%)
Query: 2 KGTCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
+GT +S+L +C L+Q + + +GL D + L + G AL +
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMY--GKCGRLEDALSL 508
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
F I + + +N +I G +A+ LF+++ ++GV PD+ T+ +L A G V
Sbjct: 509 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 568
Query: 119 GQGRKVHAFV-IKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-WNIMIS 176
+G+ + G+ ++DMY G+L + + + + S W ++S
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628
Query: 177 GC 178
C
Sbjct: 629 AC 630
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 107/216 (49%), Gaps = 7/216 (3%)
Query: 4 TCISLLKSCKSMCEL----KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
T +S+L +C +L K + A I +G + D N L I+ + GD + +F
Sbjct: 465 TVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSL--ITMYAKCGDLSSSQDLF 522
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ + ++ +N M+ A A G + L ++R GV D +++ L A L +
Sbjct: 523 NGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLE 582
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
+G+++H +K G E D+++ N+ DMY++ G + + ++ + +R SWNI+IS
Sbjct: 583 EGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALG 642
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
R F+E F M +E KP T VS LTAC+
Sbjct: 643 RHGYFEEVCATFHEM-LEMGIKPGHVTFVSLLTACS 677
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 101/212 (47%), Gaps = 3/212 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+QI + SGL+ N L IS S+G+ YA IFD + + ++N + A+A
Sbjct: 180 RQIIGQVVKSGLESKLAVENSL--ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYA 237
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G + +F +R ++ T +L +G + GR +H V+K G +
Sbjct: 238 QNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVC 297
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
VCN+L+ MYA GR + +F++ P +D +SWN +++ V R +A+ M + S
Sbjct: 298 VCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM-ISS 356
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ N T S L AC E G+ +H +
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKGRILHGLV 388
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 108/208 (51%), Gaps = 4/208 (1%)
Query: 21 IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKK 80
+ L+ SGL ++ N L +S IG+ + R+ + + + +N +I +A+
Sbjct: 384 LHGLVVVSGLFYNQIIGNAL--VSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAED 441
Query: 81 GSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD-VGQGRKVHAFVIKSGLEFDAYV 139
+A++ FQ +R +GV + T VL A GD + +G+ +HA+++ +G E D +V
Sbjct: 442 EDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 501
Query: 140 CNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESK 199
NSL+ MYA+ G LS ++LF +R+ ++WN M++ +E ++ +MR
Sbjct: 502 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMR-SFG 560
Query: 200 EKPNEATVVSTLTACAALRNAEVGKEIH 227
++ + L+A A L E G+++H
Sbjct: 561 VSLDQFSFSEGLSAAAKLAVLEEGQQLH 588
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 96/181 (53%), Gaps = 2/181 (1%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
+ G A +FD + + ++N M+ + G + + F+++ + G+ P ++
Sbjct: 3 TKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIA 62
Query: 107 YVLKAIGCLGDV-GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
++ A G G + +G +VH FV KSGL D YV +++ +Y G +S +++FEE PD
Sbjct: 63 SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPD 122
Query: 166 RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
R+ VSW ++ G +E I+ ++ MR E NE ++ +++C L++ +G++
Sbjct: 123 RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGV-GCNENSMSLVISSCGLLKDESLGRQ 181
Query: 226 I 226
I
Sbjct: 182 I 182
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+F + L ++N ++ +F G A+ L + G + T+ L A
Sbjct: 318 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
+GR +H V+ SGL ++ + N+L+ MY ++G +S+ + + + P RD V+WN +I G
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN-AEVGKEIHSYI 230
+ +A+ FQ MR+E N TVVS L+AC + E GK +H+YI
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSS-NYITVVSVLSACLLPGDLLERGKPLHAYI 490
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 88/174 (50%), Gaps = 1/174 (0%)
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG 116
++F+ + ++ ++ ++ ++ KG I +++ +R +GV + + V+ + G L
Sbjct: 115 KVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLK 174
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
D GR++ V+KSGLE V NSL+ M +G + +F++ +RD +SWN + +
Sbjct: 175 DESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAA 234
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ +E+ F MR ++ N TV + L+ + + + G+ IH +
Sbjct: 235 AYAQNGHIEESFRIFSLMR-RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLV 287
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 146 MYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEA 205
MY + GR+ + LF+ P R+ VSWN M+SG VR + E +EFF++M + KP+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM-CDLGIKPSSF 59
Query: 206 TVVSTLTACAALRNAEV---GKEIHSYI 230
+ S +TAC R+ + G ++H ++
Sbjct: 60 VIASLVTACG--RSGSMFREGVQVHGFV 85
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 4/164 (2%)
Query: 17 ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKA 76
E +Q+ L G + D N A S G+ +++ SL ++N++I A
Sbjct: 583 EGQQLHGLAVKLGFEHDSFIFNA--AADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS-GLEF 135
+ G F + F ++ E G+ P + T+ +L A G V +G + + + GLE
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700
Query: 136 DAYVCNSLMDMYAELGRLSDFKELFEETPDRDN-VSWNIMISGC 178
C ++D+ GRL++ + + P + N + W +++ C
Sbjct: 701 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASC 744
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 99/176 (56%), Gaps = 4/176 (2%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD + Q ++ ++ MI A++K ++A+ L + D V P+ YTY VL++
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ DV R +H +IK GLE D +V ++L+D++A+LG D +F+E D + WN +
Sbjct: 175 MSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
I G + R A+E F+RM+ + +AT+ S L AC L E+G + H +I
Sbjct: 232 IGGFAQNSRSDVALELFKRMK-RAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 109/209 (52%), Gaps = 5/209 (2%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
S+L+SC M +++ + I GL+ D + L I + +G+ AL +FD +
Sbjct: 167 SVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSAL--IDVFAKLGEPEDALSVFDEMVTGD 224
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
+N +I FA+ A+ LF++++ G + T VL+A L + G + H
Sbjct: 225 AIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHV 284
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
++K + D + N+L+DMY + G L D +F + +RD ++W+ MISG + QE
Sbjct: 285 HIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACA 215
A++ F+RM+ S KPN T+V L AC+
Sbjct: 343 ALKLFERMK-SSGTKPNYITIVGVLFACS 370
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
RA+ L+ G+W D+ TY ++K V +G + + +G ++ N L+
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLI 103
Query: 145 DMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNE 204
+MY + L+D +LF++ P R+ +SW MIS +CK Q+A+E M + +PN
Sbjct: 104 NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLM-LRDNVRPNV 162
Query: 205 ATVVSTLTACAALRNAEV 222
T S L +C + + +
Sbjct: 163 YTYSSVLRSCNGMSDVRM 180
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 2 KGTCISLLKSCKSMCELK-QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
+ T S+L++C + L+ +QA + QD N L + G ALR+F+
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNAL--VDMYCKCGSLEDALRVFN 317
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+++ + ++ MI A+ G + A+ LF++++ G P+ T VL A G +
Sbjct: 318 QMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 121 GRKVHAFVIK-SGLE--FDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMIS 176
G + K G++ + Y C ++D+ + G+L D +L E + D V+W ++
Sbjct: 378 GWYYFRSMKKLYGIDPVREHYGC--MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLG 435
Query: 177 GC 178
C
Sbjct: 436 AC 437
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 8/232 (3%)
Query: 2 KGTCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
K T LLKSC + ++ Q + A + +G D T L +S + AL++
Sbjct: 31 KFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATAL--VSMYMKVKQVTDALKV 88
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
D + + + + N + + G R A +F R G ++ T VL GC GD+
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLG--GC-GDI 145
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
G ++H +KSG E + YV SL+ MY+ G +FE+ P + V++N ISG
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ F MR S E+PN+ T V+ +TACA+L N + G+++H +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLV 257
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 104/210 (49%), Gaps = 7/210 (3%)
Query: 23 ALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFA 78
A I + L+ R+ ++ IS G A+ +F+ + +P +N +I F+
Sbjct: 285 AYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFS 344
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G A F+++ + P +L A + + G+++H VIK+ E D +
Sbjct: 345 QLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIF 404
Query: 139 VCNSLMDMYAELGRLSDFKELFE--ETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRM 196
V SL+DMY + G S + +F+ E +D V WN+MISG + + AIE F+ +R
Sbjct: 405 VLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLR- 463
Query: 197 ESKEKPNEATVVSTLTACAALRNAEVGKEI 226
E K +P+ AT + L+AC+ N E G +I
Sbjct: 464 EEKVEPSLATFTAVLSACSHCGNVEKGSQI 493
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 40/264 (15%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
T S+L C + Q+ L SG + + L +S S G++ A R+F+ +
Sbjct: 134 TVASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSL--VSMYSRCGEWVLAARMFEKVP 191
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLRE-DGVWPDNYTYPYVLKAIGCLGDVGQGR 122
S+ YN I + G S+F +R+ P++ T+ + A L ++ GR
Sbjct: 192 HKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGR 251
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAE----------LGRLSDFK--------------- 157
++H V+K +F+ V +L+DMY++ L D +
Sbjct: 252 QLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMIN 311
Query: 158 -------ELFE----ETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
ELFE E D+ +WN +ISG + + EA +FF+RM + P+
Sbjct: 312 GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM-LSVVMVPSLKC 370
Query: 207 VVSTLTACAALRNAEVGKEIHSYI 230
+ S L+AC+ + + GKEIH ++
Sbjct: 371 LTSLLSACSDIWTLKNGKEIHGHV 394
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 4/128 (3%)
Query: 100 PDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKEL 159
P+ +T+P +LK+ LGDV QGR +HA V+K+G D + +L+ MY ++ +++D ++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 160 FEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
+E P+R S N +SG + ++A F R+ S N TV S L C +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARV-SGSGMNSVTVASVLGGCG---D 144
Query: 220 AEVGKEIH 227
E G ++H
Sbjct: 145 IEGGMQLH 152
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 12/231 (5%)
Query: 7 SLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SLL +C + LK +I + + ++D L L+ + + +A RIFD +
Sbjct: 373 SLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSS--WARRIFDRFE 430
Query: 64 ---QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ +F +NVMI + K G AI +F+ LRE+ V P T+ VL A G+V +
Sbjct: 431 PKPKDPVF-WNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEK 489
Query: 121 GRKVHAFVIKS-GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G ++ + + G + ++D+ GRL + KE+ ++ + + ++ ++ C
Sbjct: 490 GSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCR 549
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ + M++ E N A V + AAL E + I I
Sbjct: 550 --QHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVI 598
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 103 bits (258), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
Query: 52 FHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA 111
F A IF + Q + ++ +I + +KG + LF ++R + D T+ VLKA
Sbjct: 402 FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKA 461
Query: 112 IGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
+ G+++HAF+I+SG + + + L+DMYA+ G + D ++FEE PDR+ VSW
Sbjct: 462 SASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSW 521
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
N +IS + AI F +M +ES +P+ +++ LTAC+ E G E
Sbjct: 522 NALISAHADNGDGEAAIGAFAKM-IESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 99/170 (58%), Gaps = 1/170 (0%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+F+ I + +N +I + K G + +I LF ++R+ G P ++T+ VLKA+ L D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
G+++HA + +G DA V N ++D Y++ R+ + + LF+E P+ D VS+N++IS
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ +++ ++ FF+ M+ ++ N + L+ A L + ++G+++H
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRN-FPFATMLSIAANLSSLQMGRQLH 374
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 105/201 (52%), Gaps = 9/201 (4%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
++T++ IS GD A +FD + ++ + +++ +A+ F A LF+Q+
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 94 --REDGVWPDNYTYPYVLKAIGCLGDVGQGR--KVHAFVIKSGLEFDAY--VCNSLMDMY 147
PD+ T+ +L GC V Q +VHAF +K G + + + V N L+ Y
Sbjct: 137 CRSSSCTLPDHVTFTTLLP--GCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSY 194
Query: 148 AELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATV 207
E+ RL LFEE P++D+V++N +I+G + + E+I F +MR +S +P++ T
Sbjct: 195 CEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMR-QSGHQPSDFTF 253
Query: 208 VSTLTACAALRNAEVGKEIHS 228
L A L + +G+++H+
Sbjct: 254 SGVLKAVVGLHDFALGQQLHA 274
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 109/213 (51%), Gaps = 5/213 (2%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALR-IFDHIQQPSLFNYNVMIKAF 77
+Q+ AL +G +D N+++ S D R +FD + + +YNV+I ++
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFY---SKHDRVLETRMLFDEMPELDFVSYNVVISSY 326
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
++ + ++ F++++ G N+ + +L L + GR++H + + +
Sbjct: 327 SQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSIL 386
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
+V NSL+DMYA+ + + +F+ P R VSW +ISG V+ ++ F +MR
Sbjct: 387 HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR-G 445
Query: 198 SKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
S + +++T + L A A+ + +GK++H++I
Sbjct: 446 SNLRADQSTFATVLKASASFASLLLGKQLHAFI 478
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 2 KGTCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
+ T ++LK+ S L KQ+ A I SG ++ + + L + + G A+++
Sbjct: 452 QSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGL--VDMYAKCGSIKDAVQV 509
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
F+ + + ++N +I A A G AI F ++ E G+ PD+ + VL A G V
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569
Query: 119 GQGRK-VHAFVIKSGL--EFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIM 174
QG + A G+ + Y C ++D+ GR ++ ++L +E P + D + W+ +
Sbjct: 570 EQGTEYFQAMSPIYGITPKKKHYAC--MLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 175 ISGC 178
++ C
Sbjct: 628 LNAC 631
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 96/177 (54%), Gaps = 3/177 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A +FD + + ++ ++N M+ + + A+ +R++ DN T ++L
Sbjct: 348 ARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSG 407
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD-RDNVSWNI 173
+ DV G++ H F+ + G + + V N+L+DMY + G L F + + RD VSWN
Sbjct: 408 ISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNA 467
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+++G R R ++A+ FF+ M++E+ KP++ T+ + L CA + +GK IH ++
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQVEA--KPSKYTLATLLAGCANIPALNLGKAIHGFL 522
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 116/257 (45%), Gaps = 37/257 (14%)
Query: 8 LLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
+LKSC + +L+ Q+ + G + D ++ + + A R+FD I
Sbjct: 168 VLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRV--MSDARRVFDEIVN 225
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
PS ++NV+++ + + G A+ +F ++ E V P N+T V+ A + G+ +
Sbjct: 226 PSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI 285
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEET--------------------- 163
HA +K + D V S+ DMY + RL + +F++T
Sbjct: 286 HAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLT 345
Query: 164 ----------PDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
P+R+ VSWN M+ G V + EA++F MR E E + T+V L
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEI-ENIDNVTLVWILNV 404
Query: 214 CAALRNAEVGKEIHSYI 230
C+ + + ++GK+ H +I
Sbjct: 405 CSGISDVQMGKQAHGFI 421
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 111/224 (49%), Gaps = 6/224 (2%)
Query: 8 LLKSCKS---MCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
L +SC S + + +++Q+ + LN+ AI G A +F+ + +
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNR--AIEAYGKCGCVDDARELFEEMPE 124
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
++N +I A A+ G +F+++ DGV ++ VLK+ G + D+ R++
Sbjct: 125 RDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQL 184
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H V+K G + + S++D+Y + +SD + +F+E + +VSWN+++ +
Sbjct: 185 HCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFN 244
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
EA+ F +M +E +P TV S + AC+ EVGK IH+
Sbjct: 245 DEAVVMFFKM-LELNVRPLNHTVSSVMLACSRSLALEVGKVIHA 287
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T + +L C + ++ KQ I+ G + N L+ + G A F
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMY--GKCGTLQSANIWFR 454
Query: 61 HIQQ-PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ + ++N ++ A+ G +A+S F+ ++ + P YT +L + +
Sbjct: 455 QMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAK-PSKYTLATLLAGCANIPALN 513
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFK-ELFEETPDRDNVSWNIMISGC 178
G+ +H F+I+ G + D + +++DMY++ R D+ E+F+E RD + WN +I GC
Sbjct: 514 LGKAIHGFLIRDGYKIDVVIRGAMVDMYSKC-RCFDYAIEVFKEAATRDLILWNSIIRGC 572
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
R R +E E F + E KP+ T + L AC + E+G
Sbjct: 573 CRNGRSKEVFELFMLLENEGV-KPDHVTFLGILQACIREGHVELG 616
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 109/199 (54%), Gaps = 6/199 (3%)
Query: 31 QQDRDTLNKLM-AISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISL 89
++D T N ++ A S + D A ++F + ++N +I + K GS A +L
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSD---AEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNL 112
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
F +++ DG+ P+ YT VL+ L + +G ++H IK+G + D V N L+ MYA+
Sbjct: 113 FWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQ 172
Query: 150 LGRLSDFKELFEETP-DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
R+S+ + LFE +++NV+W M++G + +AIE F+ +R E + N+ T
Sbjct: 173 CKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQS-NQYTFP 231
Query: 209 STLTACAALRNAEVGKEIH 227
S LTACA++ VG ++H
Sbjct: 232 SVLTACASVSACRVGVQVH 250
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 113/224 (50%), Gaps = 10/224 (4%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTD-SSIGDFHYALRIF 59
T S+L+ C S+ L +QI +G D + +N L+A+ I + Y +F
Sbjct: 127 TLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEY---LF 183
Query: 60 DHIQ-QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
+ ++ + + + M+ +++ G +AI F+ LR +G + YT+P VL A +
Sbjct: 184 ETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSAC 243
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
G +VH ++KSG + + YV ++L+DMYA+ + + L E D VSWN MI GC
Sbjct: 244 RVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
VR EA+ F RM E K ++ T+ S L C AL E+
Sbjct: 304 VRQGLIGEALSMFGRMH-ERDMKIDDFTIPSILN-CFALSRTEM 345
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 108/225 (48%), Gaps = 7/225 (3%)
Query: 7 SLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S+L +C S+ + Q+ I SG + + + L I + + A + + ++
Sbjct: 232 SVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSAL--IDMYAKCREMESARALLEGME 289
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIG-CLGDVGQGR 122
+ ++N MI ++G A+S+F ++ E + D++T P +L ++
Sbjct: 290 VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIAS 349
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
H ++K+G V N+L+DMYA+ G + ++FE ++D +SW +++G
Sbjct: 350 SAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNG 409
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ EA++ F MR+ P++ S L+A A L E G+++H
Sbjct: 410 SYDEALKLFCNMRV-GGITPDKIVTASVLSASAELTLLEFGQQVH 453
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G AL++F+ + + + ++ ++ GS+ A+ LF +R G+ PD VL
Sbjct: 378 GIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVL 437
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A L + G++VH IKSG V NSL+ MY + G L D +F RD +
Sbjct: 438 SASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI 497
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMR 195
+W +I G + ++A +F MR
Sbjct: 498 TWTCLIVGYAKNGLLEDAQRYFDSMR 523
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 87/162 (53%), Gaps = 1/162 (0%)
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
L +N M+ + + + + LF + + G D++T V K G L + QG++VHA
Sbjct: 482 LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA 541
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
+ IKSG + D +V + ++DMY + G +S + F+ P D+V+W MISGC+ +
Sbjct: 542 YAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEER 601
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
A F +MR+ P+E T+ + A + L E G++IH+
Sbjct: 602 AFHVFSQMRLMGV-LPDEFTIATLAKASSCLTALEQGRQIHA 642
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 105/215 (48%), Gaps = 6/215 (2%)
Query: 4 TCISLLKSCK---SMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T ++ K+C ++ + KQ+ A SG D + ++ + GD A FD
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYV--KCGDMSAAQFAFD 576
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I P + MI + G RA +F Q+R GV PD +T + KA CL + Q
Sbjct: 577 SIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQ 636
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
GR++HA +K D +V SL+DMYA+ G + D LF+ + +WN M+ G +
Sbjct: 637 GRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQ 696
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+E ++ F++M+ KP++ T + L+AC+
Sbjct: 697 HGEGKETLQLFKQMK-SLGIKPDKVTFIGVLSACS 730
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 8/180 (4%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKG-----SFRRAI 87
+R +N L IS S G YA R+FD + L ++N ++ A+A+ + ++A
Sbjct: 73 ERFLINNL--ISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAF 130
Query: 88 SLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMY 147
LF+ LR+D V+ T +LK G V H + K GL+ D +V +L+++Y
Sbjct: 131 LLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIY 190
Query: 148 AELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATV 207
+ G++ + K LFEE P RD V WN+M+ + +EAI+ S PNE T+
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFH-SSGLNPNEITL 249
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 90/179 (50%), Gaps = 3/179 (1%)
Query: 52 FHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA 111
F +A +FD++ + L ++N +I A+ G A+ LF QL G+ PD YT VLKA
Sbjct: 366 FGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Query: 112 IGCLGD-VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
L + + ++VH IK D++V +L+D Y+ R E+ E + D V+
Sbjct: 426 ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR-NRCMKEAEILFERHNFDLVA 484
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
WN M++G + + ++ F M + E+ ++ T+ + C L GK++H+Y
Sbjct: 485 WNAMMAGYTQSHDGHKTLKLFALMHKQG-ERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 3/204 (1%)
Query: 28 SGLQQDRDTLNKLMAIS-TDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRA 86
SGL + TL L IS DS G D + N + + G +
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299
Query: 87 ISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM 146
+ F + E V D T+ +L + + G++VH +K GL+ V NSL++M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
Y +L + + +F+ +RD +SWN +I+G + EA+ F ++ + KP++ T
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL-LRCGLKPDQYT 418
Query: 207 VVSTLTACAALRNA-EVGKEIHSY 229
+ S L A ++L + K++H +
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVH 442
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 100/181 (55%), Gaps = 2/181 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G + A R+FD I++P ++NV+I A G A+S+F Q+R G PD + +L
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE-TPDRDN 168
A + QG ++H+++IK G D VCNSL+ MY L LFE+ + D+
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
VSWN +++ C++ ++ E + F+ M + S+ +P+ T+ + L C + + ++G ++H
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLM-LVSECEPDHITMGNLLRGCVEISSLKLGSQVHC 497
Query: 229 Y 229
Y
Sbjct: 498 Y 498
Score = 97.8 bits (242), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 119/229 (51%), Gaps = 9/229 (3%)
Query: 4 TCISLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T ISL+ +C +S+ + ++I I S + D N ++++ G A +FD
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMY--GKCGSLRDAREVFD 126
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + +L +Y +I +++ G AI L+ ++ ++ + PD + + ++KA DVG
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 121 GRKVHAFVIKSGLEFDAYVC--NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
G+++HA VIK LE +++ N+L+ MY ++SD +F P +D +SW+ +I+G
Sbjct: 187 GKQLHAQVIK--LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ EA+ + M PNE S+L AC++L + G +IH
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH 293
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 101/210 (48%), Gaps = 4/210 (1%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF-DHIQQPSLFNYNVMIKAFA 78
QI + I G D N L+ + T S D + +F D ++N ++ A
Sbjct: 392 QIHSYIIKWGFLADLTVCNSLLTMYTFCS--DLYCCFNLFEDFRNNADSVSWNTILTACL 449
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ + LF+ + PD+ T +L+ + + G +VH + +K+GL + +
Sbjct: 450 QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF 509
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ N L+DMYA+ G L + +F+ +RD VSW+ +I G + +EA+ F+ M+
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG 569
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHS 228
E PN T V LTAC+ + E G ++++
Sbjct: 570 IE-PNHVTFVGVLTACSHVGLVEEGLKLYA 598
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S++K+C S ++ KQ+ A + L+ + + I+ A R+F I
Sbjct: 173 SIIKACASSSDVGLGKQLHAQVI--KLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVW-PDNYTYPYVLKAIGCLGDVGQGR 122
L +++ +I F++ G A+S +++ GV+ P+ Y + LKA L G
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
++H IKS L +A SL DMYA G L+ + +F++ D SWN++I+G
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNG 350
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA+ F +MR S P+ ++ S L A G +IHSYI
Sbjct: 351 YADEAVSVFSQMR-SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYI 397
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 85/161 (52%), Gaps = 2/161 (1%)
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNY-TYPYVLKAIGCLGDVGQGRKVHAFVI 129
N I + K +R A+ F +++ + TY ++ A + QGRK+H ++
Sbjct: 35 NDHINSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHIL 94
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIE 189
S ++D + N ++ MY + G L D +E+F+ P+R+ VS+ +I+G + + EAI
Sbjct: 95 NSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIR 154
Query: 190 FFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ +M ++ P++ S + ACA+ + +GK++H+ +
Sbjct: 155 LYLKM-LQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 115/228 (50%), Gaps = 7/228 (3%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
+ L +SC S+ + Q+ A + +G + RD L I + + +G + +F+ P
Sbjct: 5 MPLFRSCSSLRLVSQLHAHLLVTG-RLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD---VGQGR 122
F Y V+IK AI L+ +L + + +P VL+A C G + G
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRA--CAGSREHLSVGG 121
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
KVH +IK G++ DA + SL+ MY + G LSD +++F+ P RD V+W+ ++S C+
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+A+ F+ M ++ +P+ T++S + CA L + + +H I
Sbjct: 182 EVVKALRMFKCM-VDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQI 228
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 95/180 (52%), Gaps = 1/180 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+ A ++FD + L ++ ++ + + G +A+ +F+ + +DGV PD T V+
Sbjct: 150 GNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVV 209
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
+ LG + R VH + + + D +CNSL+ MY++ G L + +FE+ ++ V
Sbjct: 210 EGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAV 269
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
SW MIS R + ++A+ F M ++S +PN T+ S L++C + GK +H +
Sbjct: 270 SWTAMISSYNRGEFSEKALRSFSEM-IKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 119/231 (51%), Gaps = 7/231 (3%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T IS+++ C + L+ + I D N L+ + S GD + RIF+
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMY--SKCGDLLSSERIFE 261
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I + + ++ MI ++ + +A+ F ++ + G+ P+ T VL + G +G + +
Sbjct: 262 KIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIRE 321
Query: 121 GRKVHAFVIKSGLEFD-AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G+ VH F ++ L+ + + +L+++YAE G+LSD + + DR+ V+WN +IS
Sbjct: 322 GKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYA 381
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+A+ F++M + + KP+ T+ S+++AC +GK+IH ++
Sbjct: 382 HRGMVIQALGLFRQM-VTQRIKPDAFTLASSISACENAGLVPLGKQIHGHV 431
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 93/179 (51%), Gaps = 5/179 (2%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+ D LR+ + ++ +N +I +A +G +A+ LF+Q+ + PD +T
Sbjct: 355 LSDCETVLRV---VSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASS 411
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
+ A G V G+++H VI++ + D +V NSL+DMY++ G + +F + R
Sbjct: 412 ISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSV 470
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
V+WN M+ G + EAI F M S + NE T ++ + AC+++ + E GK +H
Sbjct: 471 VTWNSMLCGFSQNGNSVEAISLFDYM-YHSYLEMNEVTFLAVIQACSSIGSLEKGKWVH 528
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 5/206 (2%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
KQI + + + D N L+ + + S G A +F+ I+ S+ +N M+ F+
Sbjct: 425 KQIHGHVIRTDVS-DEFVQNSLIDMYSKS--GSVDSASTVFNQIKHRSVVTWNSMLCGFS 481
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G+ AISLF + + + T+ V++A +G + +G+ VH +I SGL+ D +
Sbjct: 482 QNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK-DLF 540
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+L+DMYA+ G L+ + +F R VSW+ MI+ R AI F +M +ES
Sbjct: 541 TDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM-VES 599
Query: 199 KEKPNEATVVSTLTACAALRNAEVGK 224
KPNE ++ L+AC + E GK
Sbjct: 600 GTKPNEVVFMNVLSACGHSGSVEEGK 625
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 81/179 (45%), Gaps = 7/179 (3%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T ++++++C S+ L K + + SGL +D I + GD + A +F
Sbjct: 507 TFLAVIQACSSIGSLEKGKWVHHKLIISGL---KDLFTDTALIDMYAKCGDLNAAETVFR 563
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ S+ +++ MI A+ G AIS F Q+ E G P+ + VL A G G V +
Sbjct: 564 AMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEE 623
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-WNIMISGC 178
G+ + G+ ++ +D+ + G L + +E P + S W +++GC
Sbjct: 624 GKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGC 682
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 121/269 (44%), Gaps = 43/269 (15%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSG-----LQQDRDTLNKLMAISTDSSIGD-----FH 53
+C LLK C+++ L Q A SG +Q+ N L AI++ S
Sbjct: 6 SCSYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVS 65
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFA-KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAI 112
YA +F I PS F +N +I+ + S + F ++R V PD +T+P+V KA
Sbjct: 66 YATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKAC 125
Query: 113 GCL--GDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
GD+ + +H ++ GL D + N+L+ +Y+ + + +LF+E P RD V+
Sbjct: 126 AAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVT 185
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMES-----------------KE------------- 200
+N++I G V+ + A E F M + +E
Sbjct: 186 YNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGL 245
Query: 201 KPNEATVVSTLTACAALRNAEVGKEIHSY 229
KP+ +VSTL+ACA + + GK IH Y
Sbjct: 246 KPDNVAIVSTLSACAQSGDWQKGKAIHDY 274
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 1/161 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A +FD + L ++N +I +A+ R AI LF ++ G+ PDN L A
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
GD +G+ +H + + L D+++ L+D YA+ G + E+FE D+ +WN M
Sbjct: 262 SGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAM 321
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
I+G + +++F++M + S KP+ T +S L C+
Sbjct: 322 ITGLAMHGNGELTVDYFRKM-VSSGIKPDGVTFISVLVGCS 361
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 103 bits (256), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 105/188 (55%), Gaps = 5/188 (2%)
Query: 38 NKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG 97
+ L+ + DS G+ A ++F+ + + ++ ++ MI FA++ + L+ ++R+
Sbjct: 159 SSLVVLYRDS--GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKST 216
Query: 98 VWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFK 157
P++YT+ +L A G +GQGR VH + GL+ ++ NSL+ MY + G L D
Sbjct: 217 SDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAF 276
Query: 158 ELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAAL 217
+F++ ++D VSWN MI+G + +AIE F+ M +S KP+ T + L++C
Sbjct: 277 RIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC--- 333
Query: 218 RNAEVGKE 225
R+A + KE
Sbjct: 334 RHAGLVKE 341
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 93 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR 152
++ DG D Y +++ G D G H +K G D Y+ +SL+ +Y + G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 153 LSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
+ + ++FEE P+R+ VSW MISG + R ++ + +MR +S PN+ T + L+
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR-KSTSDPNDYTFTALLS 229
Query: 213 ACAALRNAEVGKEIH 227
AC G+ +H
Sbjct: 230 ACTGSGALGQGRSVH 244
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCS----GLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
T +LL +C L Q ++ + C GL+ N L IS GD A RIF
Sbjct: 223 TFTALLSACTGSGALGQGRS-VHCQTLHMGLKSYLHISNSL--ISMYCKCGDLKDAFRIF 279
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQ-QLREDGVWPDNYTYPYVLKAIGCLGDV 118
D + ++N MI +A+ G +AI LF+ + + G PD TY VL + G V
Sbjct: 280 DQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLV 339
Query: 119 GQGRKVHAFVIKSGL--EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN-VSWNIMI 175
+GRK + + GL E + Y C L+D+ G L + EL E P + N V W ++
Sbjct: 340 KEGRKFFNLMAEHGLKPELNHYSC--LVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 176 SGC 178
C
Sbjct: 398 FSC 400
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 117/226 (51%), Gaps = 7/226 (3%)
Query: 4 TCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T I+L SC++ L Q I + G QD + +N +++ + S D A +FD
Sbjct: 258 TFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSE--DTCSARLLFD 315
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + ++ VMI +A+KG A++LF + + G PD T ++ G G +
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 121 GRKVHAFVIKSGLEFD-AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G+ + A G + D +CN+L+DMY++ G + + +++F+ TP++ V+W MI+G
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYA 435
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
F EA++ F +M ++ KPN T ++ L ACA + E G E
Sbjct: 436 LNGIFLEALKLFSKM-IDLDYKPNHITFLAVLQACAHSGSLEKGWE 480
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
S+ +N+ I+ + ++ LF++++ G P+N+T+P+V KA L DVG VH
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
A +IKS D +V + +DM+ + + ++FE P+RD +WN M+SG +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+A F+ MR+ ++ P+ TV++ + + + ++ ++ + +H+
Sbjct: 136 KAFSLFREMRL-NEITPDSVTVMTLIQSASFEKSLKLLEAMHA 177
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 8/228 (3%)
Query: 4 TCISLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T ++L++S KS+ L+ + A+ G+ N IST GD A +F+
Sbjct: 155 TVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW--ISTYGKCGDLDSAKLVFE 212
Query: 61 HIQQP--SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
I + ++ ++N M KA++ G A L+ + + PD T+ + + +
Sbjct: 213 AIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETL 272
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
QGR +H+ I G + D N+ + MY++ + LF+ R VSW +MISG
Sbjct: 273 TQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGY 332
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
EA+ F M ++S EKP+ T++S ++ C + E GK I
Sbjct: 333 AEKGDMDEALALFHAM-IKSGEKPDLVTLLSLISGCGKFGSLETGKWI 379
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 86/180 (47%), Gaps = 7/180 (3%)
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIG 113
YA ++F+ + + +N M+ F + G +A SLF+++R + + PD+ T ++++
Sbjct: 105 YAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSAS 164
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFE--ETPDRDNVSW 171
+ +HA I+ G++ V N+ + Y + G L K +FE + DR VSW
Sbjct: 165 FEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSW 224
Query: 172 NIMISGCVRCKRFQEAIEFFQR--MRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
N M F EA + F + + + KP+ +T ++ +C G+ IHS+
Sbjct: 225 NSMFKA---YSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSH 281
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 117/241 (48%), Gaps = 16/241 (6%)
Query: 2 KGTCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
K T L C C+L + + L+ +GL Q +N L I S G A+ +
Sbjct: 148 KFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVL--IDMYSKCGKLDQAMSL 205
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCL--- 115
FD + ++N +I + + G+ ++L ++ DG+ Y VLKA C+
Sbjct: 206 FDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKAC-CINLN 264
Query: 116 -GDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
G + +G +H + K G+EFD V +L+DMYA+ G L + +LF P ++ V++N M
Sbjct: 265 EGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAM 324
Query: 175 ISGCVRCKRF-----QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
ISG ++ EA + F M+ E P+ +T L AC+A + E G++IH+
Sbjct: 325 ISGFLQMDEITDEASSEAFKLFMDMQRRGLE-PSPSTFSVVLKACSAAKTLEYGRQIHAL 383
Query: 230 I 230
I
Sbjct: 384 I 384
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 92/182 (50%), Gaps = 4/182 (2%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
+ +A ++FD + + ++ ++N +I + + G + +A+ LF + RE + D +TY L
Sbjct: 97 ELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
G D+ G +H V+ +GL ++ N L+DMY++ G+L LF+ +RD VS
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA---EVGKEIH 227
WN +ISG VR +E + +M + A + S L AC N E G IH
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYA-LGSVLKACCINLNEGFIEKGMAIH 275
Query: 228 SY 229
Y
Sbjct: 276 CY 277
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 90/185 (48%), Gaps = 6/185 (3%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSF-----RRAISLFQQLREDGVWPDNYT 104
G A+++F + ++ YN MI F + A LF ++ G+ P T
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPST 360
Query: 105 YPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
+ VLKA + GR++HA + K+ + D ++ ++L+++YA +G D + F T
Sbjct: 361 FSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS 420
Query: 165 DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
+D SW MI V+ ++ + A + F+++ S +P E TV ++ACA G+
Sbjct: 421 KQDIASWTSMIDCHVQNEQLESAFDLFRQL-FSSHIRPEEYTVSLMMSACADFAALSSGE 479
Query: 225 EIHSY 229
+I Y
Sbjct: 480 QIQGY 484
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 6/210 (2%)
Query: 8 LLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
+LK+C + L +QI ALI + Q D + L+ + + +G ++ F +
Sbjct: 364 VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELY--ALMGSTEDGMQCFASTSK 421
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
+ ++ MI + A LF+QL + P+ YT ++ A + G ++
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI 481
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
+ IKSG++ V S + MYA+ G + ++F E + D +++ MIS +
Sbjct: 482 QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSA 541
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
EA+ F+ M+ KPN+ + L AC
Sbjct: 542 NEALNIFESMKTHGI-KPNQQAFLGVLIAC 570
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 13/179 (7%)
Query: 8 LLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
++ +C L +QIQ SG+ D T K +IS + G+ A ++F +Q
Sbjct: 465 MMSACADFAALSSGEQIQGYAIKSGI--DAFTSVKTSSISMYAKSGNMPLANQVFIEVQN 522
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P + Y+ MI + A+ GS A+++F+ ++ G+ P+ + VL A G V QG K
Sbjct: 523 PDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKY 582
Query: 125 HAFVIKSGLEFDA----YVCNSLMDMYAELGRLSDFKELFEETPDRDN-VSWNIMISGC 178
+K+ + + C L+D+ GRLSD + L + +D+ V+W ++S C
Sbjct: 583 FQ-CMKNDYRINPNEKHFTC--LVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSC 638
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 101 DNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF 160
D+ Y + + G V G+ H +IKS L Y+ N+L++MY + L ++LF
Sbjct: 46 DSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLF 105
Query: 161 EETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA 220
+ P+R+ +S+N +ISG + +++A+E F R E+ K ++ T L C +
Sbjct: 106 DRMPERNIISFNSLISGYTQMGFYEQAMELFLEAR-EANLKLDKFTYAGALGFCGERCDL 164
Query: 221 EVGKEIHSYI 230
++G+ +H +
Sbjct: 165 DLGELLHGLV 174
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 115/217 (52%), Gaps = 41/217 (18%)
Query: 54 YALRIFDHIQQPSL--FNYNVMIKAFAKKGSFRR---AISLFQQLREDGVWPDNYTYPYV 108
YA IF HI+ L F +N++I+A S + IS++ ++R V PD +T+P++
Sbjct: 10 YANPIF-HIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFL 68
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMY--------------------- 147
L + + G++ HA ++ GL+ D +V SL++MY
Sbjct: 69 LPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDL 128
Query: 148 ----------AELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRM- 196
A+ G + D ++LF+E P+R+ +SW+ +I+G V C +++EA++ F+ M++
Sbjct: 129 PAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLP 188
Query: 197 ---ESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
E+ +PNE T+ + L+AC L E GK +H+YI
Sbjct: 189 KPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYI 225
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 103/215 (47%), Gaps = 9/215 (4%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
SLL S +L+ Q + SG +D N + ++ + G A ++FD + + +
Sbjct: 102 SLLNMYSSCGDLRSAQRVFDDSG-SKDLPAWNSV--VNAYAKAGLIDDARKLFDEMPERN 158
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLR-----EDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+ +++ +I + G ++ A+ LF++++ E V P+ +T VL A G LG + QG
Sbjct: 159 VISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG 218
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV-SWNIMISGCVR 180
+ VHA++ K +E D + +L+DMYA+ G L K +F + +V +++ MI
Sbjct: 219 KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAM 278
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
E + F M PN T V L AC
Sbjct: 279 YGLTDECFQLFSEMTTSDNINPNSVTFVGILGACV 313
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 7/222 (3%)
Query: 8 LLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
+LK+C S+ EL KQI A + GL+ + L+ S F A R F I++
Sbjct: 291 VLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS--SFESACRAFQEIRE 348
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P+ +++ +I + + F A+ F+ LR ++ +++TY + +A L D G +
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VHA IK L Y ++L+ MY++ G L D E+FE + D V+W ISG
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
EA+ F++M + KPN T ++ LTAC+ E GK
Sbjct: 469 ASEALRLFEKM-VSCGMKPNSVTFIAVLTACSHAGLVEQGKH 509
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 91/174 (52%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A R+FD + ++ + + G R A+ LF L +GV D++ + VLKA
Sbjct: 238 AKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
L ++ G+++HA V K GLE + V L+D Y + F+E + ++VSW+ +
Sbjct: 298 LEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAI 357
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
ISG + +F+EA++ F+ +R ++ N T S AC+ L + +G ++H+
Sbjct: 358 ISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHA 411
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 1/176 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD + + + + MI A+A++G +A+ LF + G P + Y +LK++
Sbjct: 137 ADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVN 196
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ GR++HA VI++GL + + +++MY + G L K +F++ + V+ +
Sbjct: 197 PRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGL 256
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ G + R ++A++ F + E E + V L ACA+L +GK+IH+ +
Sbjct: 257 MVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSV-VLKACASLEELNLGKQIHACV 311
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK 130
N+ + + +K A Q++ + GV +Y+Y + +A L + GR +H ++
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMR 110
Query: 131 SGLEFDAYVC-NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIE 189
G+E + + N ++ MY E L D +LF+E + + VS MIS +A+
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170
Query: 190 FFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
F M + S +KP + + L + R + G++IH+++
Sbjct: 171 LFSGM-LASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHV 210
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
I+ S G A +F+ + P + + I A G+ A+ LF+++ G+ P++
Sbjct: 429 ITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKS---GLEFDAYVCNSLMDMYAELGRLSDFKEL 159
T+ VL A G V QG+ +++ D Y C ++D+YA G L + +
Sbjct: 489 VTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDC--MIDIYARSGLLDEALKF 546
Query: 160 FEETP-DRDNVSWNIMISGCVRCKRFQ 185
+ P + D +SW +SGC K +
Sbjct: 547 MKNMPFEPDAMSWKCFLSGCWTHKNLE 573
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 103/219 (47%), Gaps = 31/219 (14%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
+S S GD FD + Q ++ MI + G + +AI + + ++G+ P
Sbjct: 87 LSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQ 146
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA-------------- 148
+T VL ++ + G+KVH+F++K GL + V NSL++MYA
Sbjct: 147 FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDR 206
Query: 149 -----------------ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
++G++ FE+ +RD V+WN MISG + A++ F
Sbjct: 207 MVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIF 266
Query: 192 QRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+M +S P+ T+ S L+ACA L +GK+IHS+I
Sbjct: 267 SKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHI 305
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 86/168 (51%), Gaps = 2/168 (1%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+GD + A IF ++ + + MI + + GS+ AI+LF+ + G P++YT +
Sbjct: 360 LGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAM 419
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRD 167
L L + G+++H +KSG + V N+L+ MYA+ G ++ F+ +RD
Sbjct: 420 LSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
VSW MI + +EA+E F+ M ME +P+ T V +AC
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGL-RPDHITYVGVFSACT 526
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 37/246 (15%)
Query: 16 CELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIK 75
C + +F + +D + N ++A+ +G A+ F+ + + + +N MI
Sbjct: 194 CGDPMMAKFVFDRMVVRDISSWNAMIALHMQ--VGQMDLAMAQFEQMAERDIVTWNSMIS 251
Query: 76 AFAKKGSFRRAISLFQQ-LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLE 134
F ++G RA+ +F + LR+ + PD +T VL A L + G+++H+ ++ +G +
Sbjct: 252 GFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFD 311
Query: 135 FDAYVCNSLMDMYA---------------------------------ELGRLSDFKELFE 161
V N+L+ MY+ +LG ++ K +F
Sbjct: 312 ISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFV 371
Query: 162 ETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAE 221
DRD V+W MI G + + EAI F+ M + ++PN T+ + L+ ++L +
Sbjct: 372 SLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM-VGGGQRPNSYTLAAMLSVASSLASLS 430
Query: 222 VGKEIH 227
GK+IH
Sbjct: 431 HGKQIH 436
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 32/138 (23%)
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP------------------- 164
VH VIKSGL F Y+ N+LM++Y++ G ++LF+E P
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 165 ------------DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
RD+VSW MI G ++ +AI M E E P + T+ + L
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE-PTQFTLTNVLA 154
Query: 213 ACAALRNAEVGKEIHSYI 230
+ AA R E GK++HS+I
Sbjct: 155 SVAATRCMETGKKVHSFI 172
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 10/208 (4%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ-QPSLFNYNVMIKAF 77
KQI SG N L I+ + G+ A R FD I+ + ++ MI A
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNAL--ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAF---VIKSGLE 134
A+ G A+ LF+ + +G+ PD+ TY V A G V QGR+ V K
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPT 550
Query: 135 FDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISGCVRCKRFQEAIEFFQR 193
Y C ++D++ G L + +E E+ P + D V+W ++S C K +R
Sbjct: 551 LSHYAC--MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAER 608
Query: 194 MRMESKEKPNEATVVSTL-TACAALRNA 220
+ + E + ++ L +AC A
Sbjct: 609 LLLLEPENSGAYSALANLYSACGKWEEA 636
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 102 bits (253), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 118/232 (50%), Gaps = 17/232 (7%)
Query: 4 TCISLLKSCKSMCELKQ---IQALIFCSGLQQDR---DTLNKLMAISTDSSIGDFHYALR 57
T S +K+C + E++ ++ G + + TL L ++ + A R
Sbjct: 165 TLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPV-----DARR 219
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLG 116
+FD + +P + + ++ AF+K + A+ LF + R G+ PD T+ VL A G L
Sbjct: 220 VFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLR 279
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
+ QG+++H +I +G+ + V +SL+DMY + G + + +++F +++VSW+ ++
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
G + ++AIE F+ M E+ + + L ACA L +GKEIH
Sbjct: 340 GYCQNGEHEKAIEIFREM-----EEKDLYCFGTVLKACAGLAAVRLGKEIHG 386
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 4/225 (1%)
Query: 7 SLLKSCK---SMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SLL++C S Q A + SGL+ DR+ N L+++ G R+FD
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG-MRETRRVFDGRF 124
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
++ M+ + +A+ +F ++ G+ + +T +KA LG+V GR
Sbjct: 125 VKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC 184
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
H VI G E++ ++ ++L +Y D + +F+E P+ D + W ++S +
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
++EA+ F M P+ +T + LTAC LR + GKEIH
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHG 289
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 108/212 (50%), Gaps = 10/212 (4%)
Query: 7 SLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
++L +C ++ LKQ I + +G+ + + L+ + G A ++F+ +
Sbjct: 270 TVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMY--GKCGSVREARQVFNGMS 327
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ + +++ ++ + + G +AI +F+++ E D Y + VLKA L V G++
Sbjct: 328 KKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKE 383
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H ++ G + V ++L+D+Y + G + ++ + R+ ++WN M+S + R
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGR 443
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+EA+ FF M ++ KP+ + ++ LTAC
Sbjct: 444 GEEAVSFFNDM-VKKGIKPDYISFIAILTACG 474
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 74 IKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL 133
I K G AI + + Y +L+ + G + HA V+KSGL
Sbjct: 33 ILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGL 92
Query: 134 EFDAYVCNSLMDMYAELGR-LSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
E D V NSL+ +Y +LG + + + +F+ +D +SW M+SG V K +A+E F
Sbjct: 93 ETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFV 152
Query: 193 RMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
M + NE T+ S + AC+ L +G+ H +
Sbjct: 153 EM-VSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVV 189
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A R++ + ++ +N M+ A A+ G A+S F + + G+ PD ++ +L A G
Sbjct: 416 ASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGH 475
Query: 115 LGDVGQGRK-----VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
G V +GR ++ IK G E Y C ++D+ G + + L E R++
Sbjct: 476 TGMVDEGRNYFVLMAKSYGIKPGTEH--YSC--MIDLLGRAGLFEEAENLLERAECRNDA 531
Query: 170 S-WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
S W +++ C E + ME + K + + V+
Sbjct: 532 SLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVL 571
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 112/216 (51%), Gaps = 10/216 (4%)
Query: 18 LKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ-QPSLFNYNVMIKA 76
LKQ+ A + GLQ + N + IS+ + G A R+FD + L ++N MI
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAM--ISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAG 279
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ--GRKVHAFVIKSGLE 134
F+K A LF Q++ V D YTY +L A C G+ Q G+ +H VIK GLE
Sbjct: 280 FSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA--CSGEEHQIFGKSLHGMVIKKGLE 337
Query: 135 FDAYVCNSLMDMYAEL--GRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
N+L+ MY + G + D LFE +D +SWN +I+G + ++A++FF
Sbjct: 338 QVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS 397
Query: 193 RMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+R S+ K ++ + L +C+ L ++G++IH+
Sbjct: 398 YLR-SSEIKVDDYAFSALLRSCSDLATLQLGQQIHA 432
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 89/181 (49%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G YA +FD + + ++N MI + G A LF ++ G D Y++ +L
Sbjct: 49 GFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLL 108
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
K I + G +VH VIK G E + YV +SL+DMYA+ R+ D E F+E + ++V
Sbjct: 109 KGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSV 168
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
SWN +I+G V+ + + A M M++ + T LT + K++H+
Sbjct: 169 SWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAK 228
Query: 230 I 230
+
Sbjct: 229 V 229
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 104/209 (49%), Gaps = 2/209 (0%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
K + ++ GL+Q N L+++ G AL +F+ ++ L ++N +I FA
Sbjct: 325 KSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA 384
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+KG A+ F LR + D+Y + +L++ L + G+++HA KSG + +
Sbjct: 385 QKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEF 444
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDR-DNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
V +SL+ MY++ G + ++ F++ + V+WN MI G + Q +++ F +M
Sbjct: 445 VISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQM-CN 503
Query: 198 SKEKPNEATVVSTLTACAALRNAEVGKEI 226
K + T + LTAC+ + G E+
Sbjct: 504 QNVKLDHVTFTAILTACSHTGLIQEGLEL 532
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 87/178 (48%), Gaps = 3/178 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGVWPDNYTYPYVLKAIG 113
A F I +P+ ++N +I F + + A L + + V D T+ +L +
Sbjct: 155 AFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLD 214
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEET-PDRDNVSWN 172
++VHA V+K GL+ + +CN+++ YA+ G +SD K +F+ +D +SWN
Sbjct: 215 DPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWN 274
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
MI+G + + + A E F +M+ E + T L+AC+ + GK +H +
Sbjct: 275 SMIAGFSKHELKESAFELFIQMQRHWVE-TDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 109/219 (49%), Gaps = 12/219 (5%)
Query: 9 LKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLF 68
++ + + E+ ++ +I C+ + IS G+ A R+FD +++ +
Sbjct: 250 IEDAEELFEVMPVKPVIACNAM------------ISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFV 128
++ +IK + G A+ LF +++ GV P T +L L + G++VHA +
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Query: 129 IKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAI 188
++ + D YV + LM MY + G L K +F+ P +D + WN +ISG +EA+
Sbjct: 358 VRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEAL 417
Query: 189 EFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ F M + KPNE T V+TL+AC+ E G +I+
Sbjct: 418 KVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIY 456
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 11/199 (5%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
D+D + + I G A IFD + + S+ + M+ + + A +F
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 93 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYV-CNSLMDMYAELG 151
+ E ++ +L +G V GR A + + + CN+++ + G
Sbjct: 229 MPEK----TEVSWTSML-----MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKG 279
Query: 152 RLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
++ + +F+ +R++ SW +I R EA++ F M+ + +P T++S L
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV-RPTFPTLISIL 338
Query: 212 TACAALRNAEVGKEIHSYI 230
+ CA+L + GK++H+ +
Sbjct: 339 SVCASLASLHHGKQVHAQL 357
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 71/179 (39%), Gaps = 31/179 (17%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
I+ S IG H A ++FD S+ ++N M+ + R A LF ++ + + N
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWN 83
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAF-----VIKSGLEFDAYVCNSLMDMYAEL------- 150
+K G++ + RKV V+ YV N +D+ L
Sbjct: 84 GLVSGYMKN----GEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 151 ---------------GRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
GR+ D +L+E PD+DN++ MI G + R EA E F M
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 87/206 (42%), Gaps = 31/206 (15%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
DR+ ++ +S G+ A ++FD + + ++ ++ ++K + G A SLF +
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 93 LREDGVWPDNYTYPYVLKAIGCL--GDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAEL 150
+ P+ + + IG L G + K++ + D S++ +
Sbjct: 136 M------PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKE 185
Query: 151 GRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRM---------------- 194
GR+ + +E+F+E +R ++W M++G + R +A + F M
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYV 245
Query: 195 ---RMESKEKPNEATVVSTLTACAAL 217
R+E E+ E V + AC A+
Sbjct: 246 QNGRIEDAEELFEVMPVKPVIACNAM 271
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 106/221 (47%), Gaps = 6/221 (2%)
Query: 7 SLLKSCKSMC---ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S+L +C + E KQI A I + Q + L+ + HYA +FD ++
Sbjct: 275 SVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC--LHYAKTVFDRMK 332
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
Q ++ ++ M+ + + G A+ +F ++ G+ PD+YT + A + + +G +
Sbjct: 333 QKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQ 392
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
H I SGL V NSL+ +Y + G + D LF E RD VSW M+S + R
Sbjct: 393 FHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGR 452
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
E I+ F +M ++ KP+ T+ ++AC+ E G+
Sbjct: 453 AVETIQLFDKM-VQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Score = 97.4 bits (241), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 109/198 (55%), Gaps = 6/198 (3%)
Query: 33 DRDTL--NKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLF 90
DR+T+ N LM + G AL++F +++ S+ ++ MIK A+ G + AI F
Sbjct: 202 DRNTVMYNSLMGGLL--ACGMIEDALQLFRGMEKDSV-SWAAMIKGLAQNGLAKEAIECF 258
Query: 91 QQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAEL 150
++++ G+ D Y + VL A G LG + +G+++HA +I++ + YV ++L+DMY +
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKC 318
Query: 151 GRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVST 210
L K +F+ ++ VSW M+ G + R +EA++ F M+ S P+ T+
Sbjct: 319 KCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQ-RSGIDPDHYTLGQA 377
Query: 211 LTACAALRNAEVGKEIHS 228
++ACA + + E G + H
Sbjct: 378 ISACANVSSLEEGSQFHG 395
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 103/239 (43%), Gaps = 63/239 (26%)
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLRE-DGV-WP---DNY----- 103
YA R+FD I QP+LF++N ++ A++K G S F++L + DGV W + Y
Sbjct: 59 YARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGL 118
Query: 104 ----------------------TYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCN 141
T +LK G V G+++H VIK G E V +
Sbjct: 119 VGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGS 178
Query: 142 SLMDMYAELGRLSDFKELFEETPDR------------------------------DNVSW 171
L+ MYA +G +SD K++F DR D+VSW
Sbjct: 179 PLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSW 238
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
MI G + +EAIE F+ M+++ K ++ S L AC L GK+IH+ I
Sbjct: 239 AAMIKGLAQNGLAKEAIECFREMKVQGL-KMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 99 WPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKE 158
+P+ + Y ++ A + R+V + + L + N+L+ Y++ G +S+ +
Sbjct: 38 YPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNL----FSWNNLLLAYSKAGLISEMES 93
Query: 159 LFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALR 218
FE+ PDRD V+WN++I G A++ + M + T+++ L ++
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNG 153
Query: 219 NAEVGKEIHSYI 230
+ +GK+IH +
Sbjct: 154 HVSLGKQIHGQV 165
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 8/180 (4%)
Query: 3 GTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
G IS + S+ E Q SGL N L+ + GD + R+F+ +
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY--GKCGDIDDSTRLFNEM 432
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
++ M+ A+A+ G I LF ++ + G+ PD T V+ A G V +G+
Sbjct: 433 NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQ 492
Query: 123 KVHAFVIKS-GL--EFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISGC 178
+ + G+ Y C ++D+++ GRL + P D + W ++S C
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSC--MIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSAC 550
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 100 bits (250), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 13/220 (5%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
K + + I +GL++D N L+++ F A FD I + ++N +I F+
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGF-IFPDAYTAFDGIADKDVVSWNAIIAGFS 200
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVL-------KAIGCLGDVGQGRKVHAFVI-K 130
+ A F + ++ P+ T VL K I C GR++H++V+ +
Sbjct: 201 ENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACR----SGRQIHSYVVQR 256
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEF 190
S L+ +VCNSL+ Y +GR+ + LF +D VSWN++I+G + +A +
Sbjct: 257 SWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQL 316
Query: 191 FQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
F + + P+ T++S L CA L + GKEIHSYI
Sbjct: 317 FHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYI 356
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 84 RRAISLFQQLR-EDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNS 142
R + F+ + D P + T+ VL LGD G+ +H+++IK+GLE D V N+
Sbjct: 103 RETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNA 162
Query: 143 LMDMYAELGRL-SDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEK 201
L+ MYA+ G + D F+ D+D VSWN +I+G +A F M E E
Sbjct: 163 LVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTE- 221
Query: 202 PNEATVVSTLTACAALRN---AEVGKEIHSYI 230
PN AT+ + L CA++ G++IHSY+
Sbjct: 222 PNYATIANVLPVCASMDKNIACRSGRQIHSYV 253
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 5/151 (3%)
Query: 81 GSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVC 140
G R+ + F+ L G D+ + V+KA + D+ GR +H V K G + V
Sbjct: 2 GPLRQFVQNFRLL--SGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVS 59
Query: 141 NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG-CVRCKRFQEAIEFFQRMRMESK 199
S+++MYA+ R+ D +++F + D V WNI+++G V C R E + FF+ M +
Sbjct: 60 KSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADE 117
Query: 200 EKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
KP+ T L C L ++ GK +HSYI
Sbjct: 118 PKPSSVTFAIVLPLCVRLGDSYNGKSMHSYI 148
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 97/202 (48%), Gaps = 2/202 (0%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAIS 88
GL + R ++ +S + G A +F + L +++M++ +A+ AI
Sbjct: 495 GLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIG 554
Query: 89 LFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA 148
+F++++ G+ P+ T +L L + R+ H ++I+ GL D + +L+D+YA
Sbjct: 555 VFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLG-DIRLKGTLLDVYA 613
Query: 149 ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
+ G L +F+ RD V + M++G R +EA+ + M ES KP+ +
Sbjct: 614 KCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHM-TESNIKPDHVFIT 672
Query: 209 STLTACAALRNAEVGKEIHSYI 230
+ LTAC + G +I+ I
Sbjct: 673 TMLTACCHAGLIQDGLQIYDSI 694
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 9/186 (4%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG-VWPDNYTYPY 107
+G A +F + L ++NV+I +A + +A LF L G V PD+ T
Sbjct: 276 VGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIIS 335
Query: 108 VLKAIGCLGDVGQGRKVHAFVIK-SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
+L L D+ G+++H+++++ S L D V N+L+ YA G S F +
Sbjct: 336 ILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTK 395
Query: 167 DNVSWNIMISGCVRC-KRFQEAIEFFQRMRMESKE--KPNEATVVSTLTACAALRNAEVG 223
D +SWN ++ K+FQ F + E + T++S L C ++
Sbjct: 396 DIISWNAILDAFADSPKQFQ----FLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 224 KEIHSY 229
KE+H Y
Sbjct: 452 KEVHGY 457
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 42/266 (15%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIF-CSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
T IS+L C + +L K+I + I S L +D N L IS + GD A F
Sbjct: 332 TIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNAL--ISFYARFGDTSAAYWAF 389
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ + ++N ++ AFA + ++L L + + D+ T +LK + +G
Sbjct: 390 SLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIG 449
Query: 120 QGRKVHAFVIKSGL---EFDAYVCNSLMDMYAELGRL----------------------- 153
+ ++VH + +K+GL E + + N+L+D YA+ G +
Sbjct: 450 KVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLL 509
Query: 154 ---------SDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNE 204
D + LF E D +W++M+ EAI F+ ++ +PN
Sbjct: 510 SGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGM-RPNT 568
Query: 205 ATVVSTLTACAALRNAEVGKEIHSYI 230
T+++ L CA L + + ++ H YI
Sbjct: 569 VTIMNLLPVCAQLASLHLVRQCHGYI 594
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 107/199 (53%), Gaps = 2/199 (1%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
+RD + + ++ + +G A ++FD + + +++ M+ + KK A+ L+
Sbjct: 148 NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSL 207
Query: 93 L-REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELG 151
+ R P+ +T + A + + +G+++H ++++GL+ D + +SLMDMY + G
Sbjct: 208 MQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267
Query: 152 RLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
+ + + +F++ ++D VSW MI + R++E F + + S E+PNE T L
Sbjct: 268 CIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSEL-VGSCERPNEYTFAGVL 326
Query: 212 TACAALRNAEVGKEIHSYI 230
ACA L E+GK++H Y+
Sbjct: 327 NACADLTTEELGKQVHGYM 345
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 3/207 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
K+I I +GL D + LM + G A IFD I + + ++ MI +
Sbjct: 238 KEIHGHIVRAGLDSDEVLWSSLMDMY--GKCGCIDEARNIFDKIVEKDVVSWTSMIDRYF 295
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
K +R SLF +L P+ YT+ VL A L G++VH ++ + G + ++
Sbjct: 296 KSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSF 355
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+SL+DMY + G + K + + P D VSW +I GC + + EA+++F + ++S
Sbjct: 356 ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD-LLLKS 414
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKE 225
KP+ T V+ L+AC E G E
Sbjct: 415 GTKPDHVTFVNVLSACTHAGLVEKGLE 441
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A+++ ++P Y +I+ ++ + + + +R G P + +L+
Sbjct: 73 AVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAK 132
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
G + RKV + D N +++ YAE+G L + ++LF+E ++D+ SW M
Sbjct: 133 CGSLVDARKVFDEMPNR----DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAM 188
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++G V+ + +EA+ + M+ +PN TV + A AA++ GKEIH +I
Sbjct: 189 VTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHI 244
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 28/182 (15%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+ A + D +P L ++ +I A+ G A+ F L + G PD+ T+ VL
Sbjct: 368 GNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVL 427
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEF--------------DAYVCNSLMDMYAELGRLSD 155
A HA +++ GLEF D Y C L+D+ A GR
Sbjct: 428 SAC-----------THAGLVEKGLEFFYSITEKHRLSHTSDHYTC--LVDLLARSGRFEQ 474
Query: 156 FKELFEETPDRDN-VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
K + E P + + W ++ GC A E Q + E P ++ + A
Sbjct: 475 LKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAA 534
Query: 215 AA 216
A
Sbjct: 535 AG 536
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 100 bits (249), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 93/178 (52%), Gaps = 1/178 (0%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+G+ A R+FD ++ + MIKA+ +KG A+ LF Q+++ GV P + +
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
L L + GR+VHA +++ + D YV + LM MY + G L K +F+ +D
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDI 397
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ WN +ISG +EA++ F M S PN+ T+++ LTAC+ E G EI
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMP-SSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 88/188 (46%), Gaps = 23/188 (12%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A IFD +++ ++ + MI + + A LF+ + E ++ +L
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSML 241
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEF-------DAYVCNSLMDMYAELGRLSDFKELFEE 162
LG GR I+ EF CN+++ + E+G +S + +F+
Sbjct: 242 -----LGYTLSGR------IEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDL 290
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
DRDN +W MI R EA++ F +M+ + +P+ +++S L+ CA L + +
Sbjct: 291 MEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV-RPSFPSLISILSVCATLASLQY 349
Query: 223 GKEIHSYI 230
G+++H+++
Sbjct: 350 GRQVHAHL 357
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 104/197 (52%)
Query: 2 KGTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH 61
+ T + LL+SC + + L GL + D + +S + G A ++FD
Sbjct: 81 RSTYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+++ +LF ++ MI A++++ +R LF+ + +DGV PD++ +P +L+ GDV G
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
+ +H+ VIK G+ V NS++ +YA+ G L + F +RD ++WN ++ +
Sbjct: 201 KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQN 260
Query: 182 KRFQEAIEFFQRMRMES 198
+ +EA+E + M E
Sbjct: 261 GKHEEAVELVKEMEKEG 277
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 3/160 (1%)
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
+F + MI G +A+ +F+++ GV P+ T + A CL + QG +VH+
Sbjct: 317 VFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
+K G D V NSL+DMY++ G+L D +++F+ ++D +WN MI+G + +
Sbjct: 377 IAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGK 436
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
A E F RM+ ++ +PN T + ++ ++N + G+ +
Sbjct: 437 AYELFTRMQ-DANLRPNIITWNTMIS--GYIKNGDEGEAM 473
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 104/221 (47%), Gaps = 13/221 (5%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDS--SIGDFHYALRIFDH 61
T +SLL +C ++ K ++ + C L+++ D ++ + TD+ GD Y+ IF
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCV-LRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLG 584
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
++ + +N +I + GS+ A++LF Q++ G+ P+ T ++ A G +G+V +G
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEG 644
Query: 122 RKV-----HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-WNIMI 175
+KV + + I LE C++++ +Y RL + + +E + W +
Sbjct: 645 KKVFYSIANDYHIIPALEH----CSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFL 700
Query: 176 SGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAA 216
+GC AI + + E ++VS + A A
Sbjct: 701 TGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGA 741
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 89/182 (48%), Gaps = 31/182 (17%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
S G A ++FD ++ ++ +N MI + + G +A LF ++++ + P+ T+
Sbjct: 398 SKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWN 457
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
++ IK+G E +A MD++ + + + R
Sbjct: 458 TMISG----------------YIKNGDEGEA------MDLFQRMEK--------DGKVQR 487
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ +WN++I+G ++ + EA+E F++M+ S+ PN T++S L ACA L A++ +EI
Sbjct: 488 NTATWNLIIAGYIQNGKKDEALELFRKMQF-SRFMPNSVTILSLLPACANLLGAKMVREI 546
Query: 227 HS 228
H
Sbjct: 547 HG 548
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 6/182 (3%)
Query: 50 GDFHYALRIFDHIQ-----QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYT 104
GD A+ +F ++ Q + +N++I + + G A+ LF++++ P++ T
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 105 YPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
+L A L R++H V++ L+ V N+L D YA+ G + + +F
Sbjct: 527 ILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME 586
Query: 165 DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
+D ++WN +I G V + A+ F +M+ + PN T+ S + A + N + GK
Sbjct: 587 TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGI-TPNRGTLSSIILAHGLMGNVDEGK 645
Query: 225 EI 226
++
Sbjct: 646 KV 647
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL--EFD 136
+ GS A L + G TY +L++ G + GR +HA + GL E D
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHA---RFGLFTEPD 114
Query: 137 AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRM 196
+V L+ MYA+ G ++D +++F+ +R+ +W+ MI R R++E + F R+ M
Sbjct: 115 VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLF-RLMM 173
Query: 197 ESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ P++ L CA + E GK IHS +
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV 207
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 11 SCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNY 70
+C + K I +++ G+ N ++A+ + G+ +A + F +++ + +
Sbjct: 193 NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY--AKCGELDFATKFFRRMRERDVIAW 250
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK 130
N ++ A+ + G A+ L +++ ++G+ P T+ ++ LG
Sbjct: 251 NSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGK------------- 297
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEF 190
C++ MD+ ++ E F T D +W MISG + +A++
Sbjct: 298 ---------CDAAMDLMQKM-------ETFGITADV--FTWTAMISGLIHNGMRYQALDM 339
Query: 191 FQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
F++M + + PN T++S ++AC+ L+ G E+HS
Sbjct: 340 FRKMFL-AGVVPNAVTIMSAVSACSCLKVINQGSEVHS 376
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 8/170 (4%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLF-QQLREDGVWPDNYTYPYVL 109
+F AL +F + + S+ +N +I F++ G A++ F LRE V P+ T+P +
Sbjct: 174 EFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAI 233
Query: 110 KAIGCLGDVGQGRKVHAFVIK-SGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETP 164
AI + G G+ +HA IK G F+ +V NSL+ Y++ G + D F +L EE
Sbjct: 234 TAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEE-- 291
Query: 165 DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
R+ VSWN MI G R +EA+ F++M ++ +PN T++ L AC
Sbjct: 292 QRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 31/205 (15%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD I + + + +I F K+ A F++L G+ P+ +T+ V+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
DV G+++H + +K GL + +V +++++ Y +L L+D + F++T D + VS +
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 175 ISGCVRCKRFQEAIEFFQRMRMES----------------------------KEK---PN 203
ISG ++ F+EA+ F+ M S +E PN
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 204 EATVVSTLTACAALRNAEVGKEIHS 228
E+T +TA + + + GK IH+
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHA 250
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 11/145 (7%)
Query: 43 ISTDSSIGDFHYALRIFDHIQ--QPSLFNYNVMIKAFAKKGSFRRAISLFQQLRED-GVW 99
IS S G+ +L F+ ++ Q ++ ++N MI +A G A+++F+++ +D +
Sbjct: 269 ISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLR 328
Query: 100 PDNYTYPYVLKAIGCLGDVGQG-----RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLS 154
P+N T VL A G + +G + V+ + + LE + Y C ++DM + GR
Sbjct: 329 PNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYAC--MVDMLSRSGRFK 386
Query: 155 DFKELFEETPDRDNVS-WNIMISGC 178
+ +EL + P + W ++ GC
Sbjct: 387 EAEELIKSMPLDPGIGFWKALLGGC 411
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SLL +C E +Q+ A SGL+ D + KL+ + ++ D + I
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P +NV+I ++ + F+ ++S+++++ G+ D +TYP V+KA L D GR
Sbjct: 148 HP--LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VH + S + YVCN+L+ MY G++ + LF+ +RD VSWN +I+ ++
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 184 FQEAIEFFQRMRMESKE 200
EA + RM + E
Sbjct: 266 LGEAFKLLDRMYLSGVE 282
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 15/219 (6%)
Query: 6 ISLLKSCKSMCELKQ--------IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALR 57
I+ LK+C + LK I++ F + R++L I+ S D +A
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL-----ITMYSRCSDLRHAFI 378
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+F ++ SL +N +I FA L +++ G P++ T +L +G+
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 118 VGQGRKVHAFVIKSGLEFDAYVC-NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
+ G++ H ++++ D + NSL+DMYA+ G + K +F+ RD V++ +I
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
G R + + A+ +F+ M S KP+ T+V+ L+AC+
Sbjct: 499 GYGRLGKGEVALAWFKDMD-RSGIKPDHVTMVAVLSACS 536
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+++HA I SGLEFD+ + L+ Y+ L + + + E + + WN++I +R
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
KRFQE++ ++RM M + +E T S + ACAAL + G+ +H I
Sbjct: 162 NKRFQESVSVYKRM-MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAIS 88
+RD ++ I+ +S A ++ D + + S+ +N + + G++ A++
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 89 LFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS-GLEFDA-YVCNSLMDM 146
+R V + LKA +G + G+ H VI+S D V NSL+ M
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
Y+ L +F++ +WN +ISG +R +E F + + S PN T
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET-SFLLKEMLLSGFHPNHIT 425
Query: 207 VVSTLTACAALRNAEVGKEIHSYI 230
+ S L A + N + GKE H YI
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYI 449
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 5/197 (2%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SLL +C E +Q+ A SGL+ D + KL+ + ++ D + I
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEIL 147
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P +NV+I ++ + F+ ++S+++++ G+ D +TYP V+KA L D GR
Sbjct: 148 HP--LPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRV 205
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VH + S + YVCN+L+ MY G++ + LF+ +RD VSWN +I+ ++
Sbjct: 206 VHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEK 265
Query: 184 FQEAIEFFQRMRMESKE 200
EA + RM + E
Sbjct: 266 LGEAFKLLDRMYLSGVE 282
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 106/219 (48%), Gaps = 15/219 (6%)
Query: 6 ISLLKSCKSMCELKQ--------IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALR 57
I+ LK+C + LK I++ F + R++L I+ S D +A
Sbjct: 324 INGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL-----ITMYSRCSDLRHAFI 378
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+F ++ SL +N +I FA L +++ G P++ T +L +G+
Sbjct: 379 VFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGN 438
Query: 118 VGQGRKVHAFVIKSGLEFDAYVC-NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
+ G++ H ++++ D + NSL+DMYA+ G + K +F+ RD V++ +I
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLID 498
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
G R + + A+ +F+ M S KP+ T+V+ L+AC+
Sbjct: 499 GYGRLGKGEVALAWFKDMD-RSGIKPDHVTMVAVLSACS 536
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+++HA I SGLEFD+ + L+ Y+ L + + + E + + WN++I +R
Sbjct: 102 GQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIR 161
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
KRFQE++ ++RM M + +E T S + ACAAL + G+ +H I
Sbjct: 162 NKRFQESVSVYKRM-MSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSI 210
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 7/204 (3%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAIS 88
+RD ++ I+ +S A ++ D + + S+ +N + + G++ A++
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 89 LFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS-GLEFDA-YVCNSLMDM 146
+R V + LKA +G + G+ H VI+S D V NSL+ M
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
Y+ L +F++ +WN +ISG +R +E F + + S PN T
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEET-SFLLKEMLLSGFHPNHIT 425
Query: 207 VVSTLTACAALRNAEVGKEIHSYI 230
+ S L A + N + GKE H YI
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYI 449
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 94/181 (51%), Gaps = 1/181 (0%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
+ +GD A ++F+ + + + ++ MI F + G A+ LF ++RE V P+ +T
Sbjct: 293 TQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLS 352
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
+L G G ++H V+K G + D YV N+L+D+YA+ ++ +LF E +
Sbjct: 353 SILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK 412
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ VSWN +I G +A F R + ++ E T S L ACA+L + ++G ++
Sbjct: 413 NEVSWNTVIVGYENLGEGGKAFSMF-REALRNQVSVTEVTFSSALGACASLASMDLGVQV 471
Query: 227 H 227
H
Sbjct: 472 H 472
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 97/201 (48%), Gaps = 1/201 (0%)
Query: 30 LQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISL 89
L D + I+ S G A +F+ I + + ++ + + G F ++ L
Sbjct: 175 LGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKL 234
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
+R G P+NYT+ LKA LG + VH ++K+ D V L+ +Y +
Sbjct: 235 LSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQ 294
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
LG +SD ++F E P D V W+ MI+ + EA++ F RMR E+ PNE T+ S
Sbjct: 295 LGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR-EAFVVPNEFTLSS 353
Query: 210 TLTACAALRNAEVGKEIHSYI 230
L CA + + +G+++H +
Sbjct: 354 ILNGCAIGKCSGLGEQLHGLV 374
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 3/207 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+Q+ L+ G D N L+ + D A+++F + + ++N +I +
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMD--TAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
G +A S+F++ + V T+ L A L + G +VH IK+
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
V NSL+DMYA+ G + + +F E D SWN +ISG ++A+ M+ +
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK-DR 544
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKE 225
KPN T + L+ C+ + G+E
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQE 571
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
AL +FD + + + NV A+ + + I L+ +L +G + + + LK
Sbjct: 103 ALNLFDEMPERN----NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVS 158
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
L +H+ ++K G + +A+V +L++ Y+ G + + +FE +D V W +
Sbjct: 159 LDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+S V F+++++ MRM + PN T + L A L + K +H I
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRM-AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQI 273
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 96 DGVWP--DNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRL 153
D + P D++ Y +L+ D + +H ++K G D + N L++ Y + G
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 154 SDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
D LF+E P+R+NVS+ + G C Q+ I + R+ E E N S L
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQG-YAC---QDPIGLYSRLHREGHEL-NPHVFTSFLKL 155
Query: 214 CAALRNAEVGKEIHSYI 230
+L AE+ +HS I
Sbjct: 156 FVSLDKAEICPWLHSPI 172
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 1/180 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
D + A +F+ + + ++ M+ A+A G F + LF +R V + L
Sbjct: 248 ADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASAL 307
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
+A +GD+ +G +H + ++ GL D V SLM MY++ G L ++LF DRD V
Sbjct: 308 QAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVV 367
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
SW+ MI+ + + EAI F+ M M KPN T+ S L CA + + +GK IH Y
Sbjct: 368 SWSAMIASYEQAGQHDEAISLFRDM-MRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCY 426
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 109/224 (48%), Gaps = 8/224 (3%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
+L+ CK+ L Q+ + SGL+ +N + IFD ++ P +
Sbjct: 11 MLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQD------LSRVIFDSVRDPGV 64
Query: 68 FNYNVMIKAFAKKGSFRRAISLFQQLRED-GVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
+N MI+ + + G R A+ F + E+ G+ PD Y++ + LKA D +G ++H
Sbjct: 65 VLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHD 124
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
+ + GLE D Y+ +L++MY + L +++F++ +D V+WN M+SG +
Sbjct: 125 LIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSA 184
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
A+ F MR + ++ + + A + L ++V + +H +
Sbjct: 185 ALLLFHDMR-SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLV 227
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 119/228 (52%), Gaps = 5/228 (2%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDT-LNKLMA-ISTDSSIGDFHYALRIFDH 61
T S+L+ C + ++ I C ++ D ++ L A IS + G F AL+ F+
Sbjct: 403 TLTSVLQGCAGVAA-SRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFER 461
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+ +N + + + + G +A +++ ++ GV PD+ T +L+ D +G
Sbjct: 462 LPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARG 521
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISGCVR 180
V+ +IK G + + +V ++L++M+ + L+ LF++ ++ VSWNIM++G +
Sbjct: 522 SCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLL 581
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+ +EA+ F++M++E K +PN T V+ + A A L VG +HS
Sbjct: 582 HGQAEEAVATFRQMKVE-KFQPNAVTFVNIVRAAAELSALRVGMSVHS 628
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 7/189 (3%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAIS 88
GL D LM S S G+ A ++F +I+ + +++ MI ++ + G AIS
Sbjct: 330 GLIGDVSVATSLM--SMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAIS 387
Query: 89 LFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ--GRKVHAFVIKSGLEFDAYVCNSLMDM 146
LF+ + + P+ T VL+ GC G G+ +H + IK+ +E + +++ M
Sbjct: 388 LFRDMMRIHIKPNAVTLTSVLQ--GCAGVAASRLGKSIHCYAIKADIESELETATAVISM 445
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
YA+ GR S + FE P +D V++N + G + +A + ++ M++ P+ T
Sbjct: 446 YAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGV-CPDSRT 504
Query: 207 VVSTLTACA 215
+V L CA
Sbjct: 505 MVGMLQTCA 513
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 2/173 (1%)
Query: 55 ALRIFDHIQ-QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIG 113
A+ +FD + S ++N+M+ + G A++ F+Q++ + P+ T+ +++A
Sbjct: 556 AIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAA 615
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
L + G VH+ +I+ G V NSL+DMYA+ G + ++ F E ++ VSWN
Sbjct: 616 ELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNT 675
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
M+S A+ F M+ E++ KP+ + +S L+AC E GK I
Sbjct: 676 MLSAYAAHGLASCAVSLFLSMQ-ENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 7/190 (3%)
Query: 9 LKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
LK+C + K+ I LI GL+ D L+ + + D A ++FD +
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKAR--DLVSARQVFDKMHVK 164
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ +N M+ A+ G A+ LF +R V D+ + ++ A+ L R +H
Sbjct: 165 DVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLH 224
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
VIK G F + L+DMY L + +FEE +D SW M++ F+
Sbjct: 225 GLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFE 282
Query: 186 EAIEFFQRMR 195
E +E F MR
Sbjct: 283 EVLELFDLMR 292
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 3/168 (1%)
Query: 48 SIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGVWPDNYTYP 106
+I D A ++FD + + +L ++N MI + + + I LFQ+++ + PD+ T
Sbjct: 219 NIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTIL 278
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
VL AI G + G H FV + L+ VC +++DMY++ G + K +F+E P++
Sbjct: 279 SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK 338
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
SWN MI G + A++ F M +E EKP+E T+++ +TAC
Sbjct: 339 QVASWNAMIHGYALNGNARAALDLFVTMMIE--EKPDEITMLAVITAC 384
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH-IQQPSLFNYNVMIKAFAKKGSFRRAI 87
++ + K + IS S++G YA ++FD Q+ F N MIKA+ + + +
Sbjct: 5 AIETNVQIFTKFLVISA-SAVG-IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSF 62
Query: 88 SLFQQLREDGVW-PDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM 146
+L++ LR++ + PDN+T+ + K+ V QG ++H+ + + G D YV ++DM
Sbjct: 63 ALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDM 122
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
YA+ G++ + F+E P R VSW +ISG +RC A + F +M
Sbjct: 123 YAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM 170
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 102/240 (42%), Gaps = 32/240 (13%)
Query: 4 TCISLLKSCK-SMCELK--QIQALIFCSGLQQDRDTLNKLMAISTD-----SSIGDFHYA 55
T +L KSC SMC + Q+ + I+ G D M +ST + G A
Sbjct: 80 TFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCAD-------MYVSTGVVDMYAKFGKMGCA 132
Query: 56 LRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCL 115
FD + S ++ +I + + G A LF Q+ D Y ++
Sbjct: 133 RNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKS 189
Query: 116 GDVGQGRKV-----HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
GD+ R++ H VI +++ Y + + ++LF+ P+R+ VS
Sbjct: 190 GDMTSARRLFDEMTHKTVI---------TWTTMIHGYCNIKDIDAARKLFDAMPERNLVS 240
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
WN MI G + K+ QE I FQ M+ + P++ T++S L A + +G+ H ++
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 6/150 (4%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
S G+ A RIFD + + + ++N MI +A G+ R A+ LF + + PD T
Sbjct: 320 SKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEK-PDEITML 378
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGL--EFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
V+ A G V +GRK + + GL + + Y C ++D+ G L + ++L P
Sbjct: 379 AVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGC--MVDLLGRAGSLKEAEDLITNMP 436
Query: 165 -DRDNVSWNIMISGCVRCKRFQEAIEFFQR 193
+ + + + +S C + K + A ++
Sbjct: 437 FEPNGIILSSFLSACGQYKDIERAERILKK 466
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 41/225 (18%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
I++ + G A ++FD + + +N M+ ++++ G + AI+LF QLR PD+
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD------- 155
Y++ +L LG+V GRK+ + VI+SG V NSL+DMY G+ SD
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMY---GKCSDTLSANKV 127
Query: 156 FKEL-----------------------------FEETPDRDNVSWNIMISGCVRCKRFQE 186
F+++ F E P R +WNIMISG C + +
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAA-LRNAEVGKEIHSYI 230
+ F+ M +ES+ KP+ T S + AC+A N G+ +H+ +
Sbjct: 188 CLSLFKEM-LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVM 231
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 1/167 (0%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
IG+ AL +F + ++ + MI + + G +A+ F ++ + GV D++ Y V
Sbjct: 284 IGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAV 343
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
L A L +G G+ +H +I G + AYV N+L+++YA+ G + + F + ++D
Sbjct: 344 LHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDL 403
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
VSWN M+ +A++ + M + S KP+ T + LT C+
Sbjct: 404 VSWNTMLFAFGVHGLADQALKLYDNM-IASGIKPDNVTFIGLLTTCS 449
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%), Gaps = 5/144 (3%)
Query: 52 FHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA 111
F AL +F + + F +N+MI A G +SLF+++ E PD YT+ ++ A
Sbjct: 154 FEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNA 213
Query: 112 IGCLGD---VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
C D V GR VHA ++K+G NS++ Y +LG D E
Sbjct: 214 --CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQ 271
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQ 192
VSWN +I C++ ++A+E F
Sbjct: 272 VSWNSIIDACMKIGETEKALEVFH 295
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 15/183 (8%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
++L +C + L K I + G Q N L ++ + GD A R F I
Sbjct: 342 AVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNAL--VNLYAKCGDIKEADRAFGDIA 399
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
L ++N M+ AF G +A+ L+ + G+ PDN T+ +L G V +G
Sbjct: 400 NKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCM 459
Query: 124 VHAFVIKS---GLEFDAYVCNSLMDMYAELGRLSDFKELFEE-----TPDRDNVSWNIMI 175
+ ++K LE D C ++DM+ G L++ K+L T +N SW ++
Sbjct: 460 IFESMVKDYRIPLEVDHVTC--MIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLL 517
Query: 176 SGC 178
C
Sbjct: 518 GAC 520
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 120/262 (45%), Gaps = 37/262 (14%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSG-LQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
T + L+K+ + E+KQI I SG L N L+ + +G+F A ++F +
Sbjct: 135 TFLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYME--LGNFGVAEKVFARM 192
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
P + ++NVMI +AK+G A+ L+ ++ DG+ PD YT +L G L D+ G+
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 123 KVHAFVIKSGLEFDA--YVCNSLMDMY-------------------------------AE 149
VH ++ + G + + + N+L+DMY
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVR 312
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAI-EFFQRMRMESKEKPNEATVV 208
LG + + +F++ P RD VSWN ++ G + Q + E F M + K KP+ T+V
Sbjct: 313 LGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 209 STLTACAALRNAEVGKEIHSYI 230
S ++ A G+ +H +
Sbjct: 373 SLISGAANNGELSHGRWVHGLV 394
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 113/227 (49%), Gaps = 8/227 (3%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF-DHIQQ 64
+ LL++C S + KQ+ A I L D +++L+ S + + A +F +
Sbjct: 38 LVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTPN 97
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P++F YN MI A + S L+ + V PD T+ Y++KA L +V Q +
Sbjct: 98 PNVFVYNTMISAVSS--SKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQ---I 152
Query: 125 HAFVIKSG-LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
H +I SG L Y+ NSL+ Y ELG +++F P D S+N+MI G +
Sbjct: 153 HCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGF 212
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA++ + +M + E P+E TV+S L C L + +GK +H +I
Sbjct: 213 SLEALKLYFKMVSDGIE-PDEYTVLSLLVCCGHLSDIRLGKGVHGWI 258
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 98/184 (53%), Gaps = 3/184 (1%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAI-SLFQQLR-EDGVWPDNYTYP 106
+GD A +FD + + L ++N ++ ++KKG +R + LF ++ + V PD T
Sbjct: 313 LGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
++ G++ GR VH VI+ L+ DA++ ++L+DMY + G + +F+ ++
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
D W MI+G Q+A++ F RM+ E PN T+++ LTAC+ E G +
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQ-EEGVTPNNVTLLAVLTACSHSGLVEEGLHV 491
Query: 227 HSYI 230
+++
Sbjct: 492 FNHM 495
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +SL+ + EL + + L+ LQ D I G A +F
Sbjct: 370 TMVSLISGAANNGELSHGRWVHGLVI--RLQLKGDAFLSSALIDMYCKCGIIERAFMVFK 427
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + + MI A G+ ++A+ LF +++E+GV P+N T VL A G V +
Sbjct: 428 TATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEE 487
Query: 121 GRKVHAF-VIKSGLEFDAYV--CNSLMDMYAELGRLSDFKELFE-ETPDRDNVS-WNIMI 175
G +H F +K FD SL+D+ GR+ + K++ + + P R + S W ++
Sbjct: 488 G--LHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSIL 545
Query: 176 SGC 178
S C
Sbjct: 546 SAC 548
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/177 (33%), Positives = 93/177 (52%), Gaps = 3/177 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+F A ++FD + L ++N +I G A+ +F ++ G+ PD++T V
Sbjct: 166 GEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVT 225
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLE--FDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
+ G LGD+ ++H V+++ E D + NSL+DMY + GR+ +FEE R+
Sbjct: 226 ASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRN 285
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
VSW+ MI G EA+E F++MR E +PN+ T V L+AC E GK
Sbjct: 286 VVSWSSMIVGYAANGNTLEALECFRQMR-EFGVRPNKITFVGVLSACVHGGLVEEGK 341
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 103/221 (46%), Gaps = 31/221 (14%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
+LL +C S+ +++I IF S RI D Q P
Sbjct: 52 TLLSNCTSLARVRRIHGDIFRS----------------------------RILD--QYPI 81
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
F +N +++++ + S AI ++ + V PD Y+ P V+KA + D G+++H+
Sbjct: 82 AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHS 141
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
++ G D + + + +Y + G + +++F+E P+R SWN +I G R E
Sbjct: 142 VAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANE 201
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
A+E F M+ E P++ T+VS +C L + + ++H
Sbjct: 202 AVEMFVDMKRSGLE-PDDFTMVSVTASCGGLGDLSLAFQLH 241
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 91/183 (49%), Gaps = 11/183 (6%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +S+ SC + +L Q+ + + ++ D + I G A IF+
Sbjct: 220 TMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFE 279
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++Q ++ +++ MI +A G+ A+ F+Q+RE GV P+ T+ VL A G V +
Sbjct: 280 EMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEE 339
Query: 121 GRKVHAFVIKSGLEFDA----YVCNSLMDMYAELGRLSDFKELFEETPDRDNV-SWNIMI 175
G+ A ++KS E + Y C ++D+ + G+L + K++ EE P + NV W ++
Sbjct: 340 GKTYFA-MMKSEFELEPGLSHYGC--IVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLM 396
Query: 176 SGC 178
GC
Sbjct: 397 GGC 399
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 93/161 (57%), Gaps = 2/161 (1%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
+N M+K + K + I LF++++ G+ D+ + V+ + +G V G+ +H +V+
Sbjct: 401 WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV 460
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIE 189
K+ L+ V NSL+D+Y ++G L+ +F E D + ++WN MI+ V C++ ++AI
Sbjct: 461 KTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA-DTNVITWNAMIASYVHCEQSEKAIA 519
Query: 190 FFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
F RM E+ KP+ T+V+ L AC + E G+ IH YI
Sbjct: 520 LFDRMVSENF-KPSSITLVTLLMACVNTGSLERGQMIHRYI 559
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 5/219 (2%)
Query: 14 SMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVM 73
S+ L++ ALI GL ++ +KL IS+ +S G + + R+F + + +F +N +
Sbjct: 39 SLESLRKHNALIITGGLSENIFVASKL--ISSYASYGKPNLSSRVFHLVTRRDIFLWNSI 96
Query: 74 IKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK-SG 132
IKA G + R++ F + G PD++T P V+ A L G VH V+K G
Sbjct: 97 IKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGG 156
Query: 133 LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
+ + V S + Y++ G L D +F+E PDRD V+W +ISG V+ + + +
Sbjct: 157 FDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLC 216
Query: 193 RMRMESK--EKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+M +KPN T+ AC+ L + G+ +H +
Sbjct: 217 KMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGF 255
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 7/226 (3%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
+ S++ SC + + K + + + L +N L I +GD A R+F
Sbjct: 435 SATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSL--IDLYGKMGDLTVAWRMFC 492
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++ +N MI ++ +AI+LF ++ + P + T +L A G + +
Sbjct: 493 E-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLER 551
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+ +H ++ ++ E + + +L+DMYA+ G L +ELF+ +D V WN+MISG
Sbjct: 552 GQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGM 611
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ AI F +M ES KP T ++ L+AC E GK++
Sbjct: 612 HGDVESAIALFDQME-ESDVKPTGPTFLALLSACTHAGLVEQGKKL 656
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 110/226 (48%), Gaps = 7/226 (3%)
Query: 9 LKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
++C ++ LK+ + +GL + + + + + S G+ A F +
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKS--GNPSEAYLSFRELGDE 294
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+F++ +I + A+ G + +F +++ G+ PD ++ +G + V QG+ H
Sbjct: 295 DMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFH 354
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV-SWNIMISGCVRCKRF 184
FVI+ D+ VCNSL+ MY + LS ++LF + N +WN M+ G + K
Sbjct: 355 GFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH 414
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ IE F++++ E + A+ S +++C+ + +GK +H Y+
Sbjct: 415 VKCIELFRKIQNLGIE-IDSASATSVISSCSHIGAVLLGKSLHCYV 459
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 10/196 (5%)
Query: 4 TCISLLKSCKSMCELKQIQALI-FCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
T ++LL +C + L++ Q + + + + + + I + G + +FD
Sbjct: 535 TLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAG 594
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
Q +NVMI + G AI+LF Q+ E V P T+ +L A G V QG+
Sbjct: 595 NQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGK 654
Query: 123 KV----HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISG 177
K+ H + +K L+ Y C L+D+ + G L + + P D V W ++S
Sbjct: 655 KLFLKMHQYDVKPNLKH--YSC--LVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSS 710
Query: 178 CVRCKRFQEAIEFFQR 193
C+ F+ I +R
Sbjct: 711 CMTHGEFEMGIRMAER 726
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 80/201 (39%), Gaps = 4/201 (1%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
DR+T + S G A +FD + + + +I + G + +
Sbjct: 158 DRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCK 217
Query: 93 LREDGV---WPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
+ G P+ T +A LG + +GR +H F +K+GL +V +S+ Y++
Sbjct: 218 MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSK 277
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
G S+ F E D D SW +I+ R +E+ + F M+ + P+ +
Sbjct: 278 SGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH-PDGVVISC 336
Query: 210 TLTACAALRNAEVGKEIHSYI 230
+ + GK H ++
Sbjct: 337 LINELGKMMLVPQGKAFHGFV 357
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 87/165 (52%), Gaps = 1/165 (0%)
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
++ ++ +I A+ G F A+ F ++R +GV P+++T+P KA+ L G+++H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
A +K G D +V S DMY + D ++LF+E P+R+ +WN IS V R +
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EAIE F R PN T + L AC+ + +G ++H +
Sbjct: 192 EAIEAFIEFR-RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLV 235
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%), Gaps = 1/175 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD I + +L +N I G R AI F + R P++ T+ L A
Sbjct: 162 ARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD 221
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ G ++H V++SG + D VCN L+D Y + ++ + +F E ++ VSW +
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSL 281
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
++ V+ ++A + R R + E ++ + S L+ACA + E+G+ IH++
Sbjct: 282 VAAYVQNHEDEKASVLYLRSRKDIVET-SDFMISSVLSACAGMAGLELGRSIHAH 335
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 20/234 (8%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALR--- 57
T + L +C L Q+ L+ SG D N L+ DF+ +
Sbjct: 211 TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI---------DFYGKCKQIR 261
Query: 58 ----IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIG 113
IF + + ++ ++ A+ + +A L+ + R+D V ++ VL A
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
+ + GR +HA +K+ +E +V ++L+DMY + G + D ++ F+E P+++ V+ N
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381
Query: 174 MISGCVRCKRFQEAIEFFQRMRMES-KEKPNEATVVSTLTACAALRNAEVGKEI 226
+I G + A+ F+ M PN T VS L+AC+ E G +I
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 121 GRKVHAFVIKS-GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
GR VHA ++K+ ++ N L++MY++L + + TP R+ VSW +ISG
Sbjct: 25 GRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLA 84
Query: 180 RCKRFQEA-IEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+ F A +EFF+ MR E PN+ T A A+LR GK+IH+
Sbjct: 85 QNGHFSTALVEFFE-MRREGV-VPNDFTFPCAFKAVASLRLPVTGKQIHA 132
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 40/261 (15%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
LL C + + +Q+ A + S +L + IS + +G A +F+ + L
Sbjct: 62 LLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANL-ISVYARLGLLLDARNVFETVSLVLL 120
Query: 68 FN---YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
+ +N ++KA G + A+ L++ +R+ G+ D Y P +L+A LG G R
Sbjct: 121 SDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAF 180
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG------C 178
H VI+ GL+ + +V N L+ +Y + GR+ D LF E P R+ +SWN+MI G C
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDC 240
Query: 179 -----------------------------VRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
+C +F++ +++F MRM EA V
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAV- 299
Query: 210 TLTACAALRNAEVGKEIHSYI 230
+ CA L + +++H Y+
Sbjct: 300 FFSVCAELEALSIAEKVHGYV 320
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 100/200 (50%), Gaps = 11/200 (5%)
Query: 35 DTLNKLMAISTDSSIGDFHYALRIFDHIQQ--------PSLFNYNVMIKAFAKKGSFRRA 86
++ N L+ D+ G AL +F +++ ++ + +IK +G +
Sbjct: 361 ESWNSLITSFVDA--GKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDS 418
Query: 87 ISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM 146
+ F+Q++ V ++ T +L L + GR++H VI++ + + V N+L++M
Sbjct: 419 LEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNM 478
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
YA+ G LS+ +FE D+D +SWN +I G ++A+ F RM + S P+
Sbjct: 479 YAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM-ISSGFHPDGIA 537
Query: 207 VVSTLTACAALRNAEVGKEI 226
+V+ L+AC+ E G+EI
Sbjct: 538 LVAVLSACSHAGLVEKGREI 557
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 122/301 (40%), Gaps = 82/301 (27%)
Query: 8 LLKSCKSMCELKQIQAL---IFCSGLQQDRDTLNKLMAISTDSS-IGDFHYALRIFDHIQ 63
+L++C+ + +A + GL+++ +N+L+ + + +GD A +F +
Sbjct: 164 ILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGD---AYNLFVEMP 220
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA---IGCLGDVGQ 120
+ ++NVMIK F+++ A+ +F+ ++ + PD T+ VL G DV +
Sbjct: 221 VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLK 280
Query: 121 --------------------------------GRKVHAFVIKSGLEFDAYVCNSLMDMYA 148
KVH +VIK G E N+L+ +Y
Sbjct: 281 YFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYG 340
Query: 149 ELGRLSDFKELFEETPDRDNVSWNIMIS-------------------------------- 176
+ G++ D + LF + ++ SWN +I+
Sbjct: 341 KQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 177 -------GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
GC R +++E+F++M+ SK N T+ L+ CA L +G+EIH +
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQF-SKVLANSVTICCILSICAELPALNLGREIHGH 459
Query: 230 I 230
+
Sbjct: 460 V 460
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 108/195 (55%), Gaps = 6/195 (3%)
Query: 37 LNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLRED 96
+N LM + S G H + +F +++ + ++N MI AF + G + L ++++
Sbjct: 356 VNSLMVMY--SRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQ 413
Query: 97 GVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDF 156
G D T +L A L + G++ HAF+I+ G++F+ + + L+DMY++ G +
Sbjct: 414 GFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRIS 472
Query: 157 KELFEET--PDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
++LFE + +RD +WN MISG + ++ F++M +E +PN TV S L AC
Sbjct: 473 QKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVASILPAC 531
Query: 215 AALRNAEVGKEIHSY 229
+ + + ++GK++H +
Sbjct: 532 SQIGSVDLGKQLHGF 546
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 42 AISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLF-QQLREDGVWP 100
AIS + +GD + R+FD + ++ +N MI + + +I LF + + +
Sbjct: 257 AISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVS 316
Query: 101 DNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF 160
D TY A+ L V GR+ H FV K+ E + NSLM MY+ G + +F
Sbjct: 317 DEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVF 376
Query: 161 EETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA 220
+RD VSWN MIS V+ E + M+ + K + TV + L+A + LRN
Sbjct: 377 LSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF-KIDYITVTALLSAASNLRNK 435
Query: 221 EVGKEIHSYI 230
E+GK+ H+++
Sbjct: 436 EIGKQTHAFL 445
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 84/146 (57%), Gaps = 1/146 (0%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
+N MI + + G + +F+++ E + P+ T +L A +G V G+++H F I
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIE 189
+ L+ + +V ++L+DMY++ G + +++F +T +R++V++ MI G + + AI
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAIS 608
Query: 190 FFQRMRMESKEKPNEATVVSTLTACA 215
F M+ ES KP+ T V+ L+AC+
Sbjct: 609 LFLSMQ-ESGIKPDAITFVAVLSACS 633
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 13/238 (5%)
Query: 4 TCISLLKSCKSMCELKQIQA----LIFCSGLQQD-RDTLNKLMA--ISTDSSIGDFHYAL 56
T S LK+C LK +A LI C LQ R N LM +S ++ F Y +
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRC--LQNSSRVVHNSLMNMYVSCLNAPDCFEYDV 166
Query: 57 --RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
++FD++++ ++ +N +I + K G A F + V P ++ V A+
Sbjct: 167 VRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSI 226
Query: 115 LGDVGQGRKVHAFVIKSGLEF--DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWN 172
+ + + ++K G E+ D +V +S + MYAELG + + +F+ +R+ WN
Sbjct: 227 SRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWN 286
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
MI V+ E+IE F + +E T + +A +AL+ E+G++ H ++
Sbjct: 287 TMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFV 344
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWP--DNYTYPY 107
G+ A ++FD I +P+ +N +I F A+ + ++++ + D YTY
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 108 VLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD------FKELFE 161
LKA ++ G+ VH +I+ V NSLM+MY D +++F+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 162 ETPDRDNVSWNIMISGCVRCKRFQEAI-EFFQRMRMESKEKP 202
++ V+WN +IS V+ R EA +F MRME K P
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSP 214
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+L +C + + KQ+ L Q+ + L + S G YA +F
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASAL--VDMYSKAGAIKYAEDMFS 580
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++ + Y MI + + G RAISLF ++E G+ PD T+ VL A G + +
Sbjct: 581 QTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDE 640
Query: 121 GRKV-----HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS--WNI 173
G K+ + I+ E Y C + DM +GR+++ E + + N++ W
Sbjct: 641 GLKIFEEMREVYNIQPSSEH--YCC--ITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGS 696
Query: 174 MISGC 178
++ C
Sbjct: 697 LLGSC 701
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 96/189 (50%), Gaps = 2/189 (1%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
+L K CKS L QI A I GL+QD++ L + S+ SS Y+ +F+ + P
Sbjct: 15 TLFKLCKSEIHLNQIHARIIRKGLEQDQN-LISIFISSSSSSSSSLSYSSSVFERVPSPG 73
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVW-PDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ +N +IK ++ K F +S+ ++ G+ PD YT+P V+K G V G VH
Sbjct: 74 TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVH 133
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
V++ G + D V S +D Y + L +++F E P+R+ VSW ++ V+ +
Sbjct: 134 GLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELE 193
Query: 186 EAIEFFQRM 194
EA F M
Sbjct: 194 EAKSMFDLM 202
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 2/191 (1%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
RD ++ I + GD A +F+ + + ++ +I +A+ G A +F ++
Sbjct: 236 RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 94 REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA-YVCNSLMDMYAELGR 152
V PD + ++ A +G KV +++ + +F + YV +L+DM A+ G
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGH 355
Query: 153 LSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
+ +LFEE P RD VS+ M+ G EAI F++M ++ P+E L
Sbjct: 356 MDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKM-VDEGIVPDEVAFTVILK 414
Query: 213 ACAALRNAEVG 223
C R E G
Sbjct: 415 VCGQSRLVEEG 425
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
D A ++F + + + ++ ++ A+ K G A S+F + E + N ++K
Sbjct: 160 DLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVK 219
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
+ GD+ +K+ + K D S++D YA+ G + ++LFEE D +
Sbjct: 220 S----GDLVNAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRA 271
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
W+ +I G + + EA + F M ++ KP+E +V ++AC+ + E+ +++ SY+
Sbjct: 272 WSALILGYAQNGQPNEAFKVFSEMCAKNV-KPDEFIMVGLMSACSQMGCFELCEKVDSYL 330
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 14/144 (9%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
I ++ G A ++F+ + Q L +Y M++ A G AI LF+++ ++G+ PD
Sbjct: 347 IDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDE 406
Query: 103 YTYPYVLKAIGCLGDVGQG-------RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD 155
+ +LK G V +G RK ++ + D Y C ++++ + G+L +
Sbjct: 407 VAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASP----DHYSC--IVNLLSRTGKLKE 460
Query: 156 FKELFEETPDRDNVS-WNIMISGC 178
EL + P + S W ++ GC
Sbjct: 461 AYELIKSMPFEAHASAWGSLLGGC 484
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 102/186 (54%), Gaps = 10/186 (5%)
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAI- 112
Y +R+F+ + QP+ +Y +I A++ A+ +F+ + E GV D+ +L
Sbjct: 192 YGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA 251
Query: 113 ---GC--LGDV-GQ--GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
GC L ++ G G+++H ++ G D ++ NSL+++YA+ ++ + +F E P
Sbjct: 252 PREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMP 311
Query: 165 DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
+ + VSWNIMI G + R +++EF RMR +S +PNE T +S L AC + E G+
Sbjct: 312 EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMR-DSGFQPNEVTCISVLGACFRSGDVETGR 370
Query: 225 EIHSYI 230
I S I
Sbjct: 371 RIFSSI 376
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 116/232 (50%), Gaps = 8/232 (3%)
Query: 2 KGTCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
K T +L SC + L KQI ++ + + ++ ++ L+A+ ++ + I
Sbjct: 416 KTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECE--KMEISECI 473
Query: 59 FDH-IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVW-PDNYTYPYVLKAIGCLG 116
FD I + + +N MI F +A+ LF+++ + V P+ ++ VL + L
Sbjct: 474 FDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLC 533
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
+ GR+ H V+KSG D++V +L DMY + G + ++ F+ ++ V WN MI
Sbjct: 534 SLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIH 593
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
G R EA+ +++M + S EKP+ T VS LTAC+ E G EI S
Sbjct: 594 GYGHNGRGDEAVGLYRKM-ISSGEKPDGITFVSVLTACSHSGLVETGLEILS 644
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 105/204 (51%), Gaps = 3/204 (1%)
Query: 28 SGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAI 87
SG Q + T ++ S GD RIF I QPS+ +N M+ ++ + AI
Sbjct: 344 SGFQPNEVTCISVLGACFRS--GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAI 401
Query: 88 SLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMY 147
S F+Q++ + PD T +L + L + G+++H VI++ + ++++ + L+ +Y
Sbjct: 402 SNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVY 461
Query: 148 AELGRLSDFKELFEETPDRDNVS-WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
+E ++ + +F++ + +++ WN MISG +A+ F+RM + PNE +
Sbjct: 462 SECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETS 521
Query: 207 VVSTLTACAALRNAEVGKEIHSYI 230
+ L++C+ L + G++ H +
Sbjct: 522 FATVLSSCSRLCSLLHGRQFHGLV 545
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 9/188 (4%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+GD A +FD + + + ++N MI +KG +A+ +++++ DG P +T V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFK-ELFEETPDRD 167
L A + D G + H +K+GL+ + +V N+L+ MYA+ G + D+ +FE +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRM-----RMESKEKPNEATVVSTLTACAALR---N 219
VS+ +I G R + EA++ F+ M +++S N ++ + C +L
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 220 AEVGKEIH 227
E+GK+IH
Sbjct: 265 NELGKQIH 272
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 44/227 (19%)
Query: 10 KSCKSMCEL------KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+ C S+ E+ KQI L G D N L+ I + D + A IF +
Sbjct: 254 EGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNK--DMNGAELIFAEMP 311
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ ++ ++N+MI F ++ +++ ++R+ G P+ T VL A GDV GR+
Sbjct: 312 EVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRR 371
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+ F P +WN M+SG +
Sbjct: 372 I-----------------------------------FSSIPQPSVSAWNAMLSGYSNYEH 396
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++EAI F++M+ ++ KP++ T+ L++CA LR E GK+IH +
Sbjct: 397 YEEAISNFRQMQFQNL-KPDKTTLSVILSSCARLRFLEGGKQIHGVV 442
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 11/179 (6%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
++L SC +C L +Q L+ SG D L + G+ A + FD +
Sbjct: 524 TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYC--KCGEIDSARQFFDAVL 581
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ + +N MI + G A+ L++++ G PD T+ VL A G V G +
Sbjct: 582 RKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLE 641
Query: 124 VHAFVIK-SGLE--FDAYVCNSLMDMYAELGRLSDFKELFEETPDR-DNVSWNIMISGC 178
+ + + + G+E D Y+C ++D GRL D ++L E TP + +V W I++S C
Sbjct: 642 ILSSMQRIHGIEPELDHYIC--IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSC 698
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 34/139 (24%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAE------------------------------- 149
G+ +H F+++ G++ D Y+CN L+D+Y E
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE-AIEFFQRMRMESKEKPNEATVV 208
+G L + E+F+ P+RD VSWN MIS VR K F+E A+ ++RM + P+ T+
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVR-KGFEEKALVVYKRMVCDGF-LPSRFTLA 142
Query: 209 STLTACAALRNAEVGKEIH 227
S L+AC+ + + G H
Sbjct: 143 SVLSACSKVLDGVFGMRCH 161
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 101/198 (51%), Gaps = 3/198 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI-QQPSLFNYNVMIKAF 77
KQI L + + + T N L+A G+ +IF + ++ +N MI +
Sbjct: 537 KQIHGLALKNNIADEATTENALIACY--GKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
+A+ L + + G D++ Y VL A + + +G +VHA +++ LE D
Sbjct: 595 IHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDV 654
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
V ++L+DMY++ GRL F P R++ SWN MISG R + +EA++ F+ M+++
Sbjct: 655 VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLD 714
Query: 198 SKEKPNEATVVSTLTACA 215
+ P+ T V L+AC+
Sbjct: 715 GQTPPDHVTFVGVLSACS 732
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 126/236 (53%), Gaps = 23/236 (9%)
Query: 7 SLLKSCKSMCE-----LKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH 61
SL+ + S+ E L+QI I SGL D + L +S + G YA ++F+
Sbjct: 211 SLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGL--VSAFAKSGSLSYARKVFNQ 268
Query: 62 IQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLRE-DGVWPDNY-----TYP-YVLKAIGC 114
++ + N ++ ++ A LF + V P++Y ++P Y L
Sbjct: 269 METRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAE--- 325
Query: 115 LGDVG--QGRKVHAFVIKSGL-EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
+VG +GR+VH VI +GL +F + N L++MYA+ G ++D + +F D+D+VSW
Sbjct: 326 --EVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
N MI+G + F EA+E ++ MR P T++S+L++CA+L+ A++G++IH
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDI-LPGSFTLISSLSSCASLKWAKLGQQIH 438
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 92/179 (51%), Gaps = 2/179 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A R+F + ++N MI + G F A+ ++ +R + P ++T L
Sbjct: 363 GSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
+ L G+++H +K G++ + V N+LM +YAE G L++ +++F P+ D V
Sbjct: 423 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV 482
Query: 170 SWNIMISGCVRCKR-FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
SWN +I R +R EA+ F + + +K N T S L+A ++L E+GK+IH
Sbjct: 483 SWNSIIGALARSERSLPEAVVCFLNAQ-RAGQKLNRITFSSVLSAVSSLSFGELGKQIH 540
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD A ++FD + + ++ ++ +++ G + A+ + + ++G++ + Y + VL
Sbjct: 50 GDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVL 109
Query: 110 KAIGCLGDVGQ--GRKVHAFVIKSGLEFDAYVCNSLMDMYAE-LGRLSDFKELFEETPDR 166
+A +G VG GR++H + K DA V N L+ MY + +G + F + +
Sbjct: 110 RACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVK 169
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
++VSWN +IS + + A F M+ + +P E T S +T +L +V
Sbjct: 170 NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG-SRPTEYTFGSLVTTACSLTEPDV 224
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
C+G G R H+ + K+ L+ D Y+CN+L++ Y E G +++F+E P R+ VSW
Sbjct: 13 CVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWAC 72
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV--GKEIH 227
++SG R +EA+ F + M E N+ VS L AC + + + G++IH
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGI-FSNQYAFVSVLRACQEIGSVGILFGRQIH 127
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 111/230 (48%), Gaps = 8/230 (3%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T IS L SC S+ K QI G+ + N LM + ++ G + +IF
Sbjct: 417 TLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAET--GYLNECRKIFS 474
Query: 61 HIQQPSLFNYNVMIKAFAK-KGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ + ++N +I A A+ + S A+ F + G + T+ VL A+ L
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE 534
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD-RDNVSWNIMISGC 178
G+++H +K+ + +A N+L+ Y + G + +++F + RDNV+WN MISG
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+ + +A++ M +++ ++ + + L+A A++ E G E+H+
Sbjct: 595 IHNELLAKALDLVWFM-LQTGQRLDSFMYATVLSAFASVATLERGMEVHA 643
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 108/210 (51%), Gaps = 6/210 (2%)
Query: 8 LLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
LL+ CK E K+I A +F G + KL+ + S GD A +F ++
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALS--GDLQTAGILFRSLKI 171
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
L +N MI + +KG + + ++ +R++ + PD YT+ V +A L + G++
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRA 231
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
HA +IK ++ + V ++L+DMY + SD +F++ R+ ++W +ISG +
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
E ++ F++M+ E +PN T + LTAC
Sbjct: 292 SEVLKCFEKMKEEGC-RPNPVTFLVVLTAC 320
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 4/155 (2%)
Query: 74 IKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL 133
+K G + A+ L L G+ + TY +L+ + +G+++HA + G
Sbjct: 83 LKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGF 139
Query: 134 EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQR 193
+ Y+ L+ +YA G L LF RD + WN MISG V+ QE + +
Sbjct: 140 ALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYD 199
Query: 194 MRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
MR +++ P++ T S AC+AL E GK H+
Sbjct: 200 MR-QNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
SS D H R+FD + ++ + +I + G + F++++E+G P+ T+
Sbjct: 258 SSFSDGH---RVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFL 314
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKS--GLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
VL A G V +G + H + +K G+E + +++D GRL + E ++P
Sbjct: 315 VVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSP 373
Query: 165 DRDNVS-WNIMISGC 178
+++ W ++ C
Sbjct: 374 CKEHPPVWGSLLGAC 388
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 124/232 (53%), Gaps = 10/232 (4%)
Query: 5 CISLLKSCKSMCELK----QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
C +K +S+ +LK QI A + +G + ++++ + I++ IG+ YA ++FD
Sbjct: 16 CPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDL-IASCGRIGEISYARKVFD 74
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD--V 118
+ Q + YN MI +++ + + L+ Q+ + + PD+ T+ +KA CL +
Sbjct: 75 ELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKA--CLSGLVL 132
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
+G V + G + D +VC+S++++Y + G++ + + LF + RD + W M++G
Sbjct: 133 EKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGF 192
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ + +A+EF++ M+ E + + ++ L A L + ++G+ +H Y+
Sbjct: 193 AQAGKSLKAVEFYREMQNEGFGR-DRVVMLGLLQASGDLGDTKMGRSVHGYL 243
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A +F + + + + M+ FA+ G +A+ +++++ +G D +L
Sbjct: 165 GKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLL 224
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
+A G LGD GR VH ++ ++GL + V SL+DMYA++G + +F + V
Sbjct: 225 QASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAV 284
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
SW +ISG + +A E M+ +P+ T+V L AC+ + + + G+ +H Y
Sbjct: 285 SWGSLISGFAQNGLANKAFEAVVEMQ-SLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCY 343
Query: 230 I 230
I
Sbjct: 344 I 344
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 2/179 (1%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
+ +G A R+F + + ++ +I FA+ G +A +++ G PD T
Sbjct: 263 AKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLV 322
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
VL A +G + GR VH +++K + D +LMDMY++ G LS +E+FE +
Sbjct: 323 GVLVACSQVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRK 381
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
D V WN MIS QE + F +M ES +P+ AT S L+A + E G+
Sbjct: 382 DLVCWNTMISCYGIHGNGQEVVSLFLKM-TESNIEPDHATFASLLSALSHSGLVEQGQH 439
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 89/183 (48%), Gaps = 12/183 (6%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQ---DRDTLNKLMAISTDSSIGDFHYALRIFD 60
T + +L +C + LK + L+ C L++ DR T LM + S G + IF+
Sbjct: 320 TLVGVLVACSQVGSLKTGR-LVHCYILKRHVLDRVTATALMDMY--SKCGALSSSREIFE 376
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
H+ + L +N MI + G+ + +SLF ++ E + PD+ T+ +L A+ G V Q
Sbjct: 377 HVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQ 436
Query: 121 GRKVHAFVI---KSGLEFDAYVCNSLMDMYAELGRLSDFKELF-EETPDRDNVSWNIMIS 176
G+ + +I K YVC L+D+ A GR+ + ++ E D W ++S
Sbjct: 437 GQHWFSVMINKYKIQPSEKHYVC--LIDLLARAGRVEEALDMINSEKLDNALPIWVALLS 494
Query: 177 GCV 179
GC+
Sbjct: 495 GCI 497
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 4/167 (2%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G +H ++++ ++QP ++N+ I A ++ I LF+ + + + PD YT+ +L
Sbjct: 493 GQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSIL 552
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLE-FDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
L D+ G +H + K+ D +VCN L+DMY + G + ++FEET +++
Sbjct: 553 SLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNL 612
Query: 169 VSWNIMISGCVRCKRF-QEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
++W +IS C+ + QEA+E F+ + KP+ + +S LTAC
Sbjct: 613 ITWTALIS-CLGIHGYGQEALEKFKE-TLSLGFKPDRVSFISILTAC 657
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 8/212 (3%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
KQ+ GL + +N L IS G+ H A R+F + ++N +I A A
Sbjct: 235 KQLHCSATKKGLDCEISVVNSL--ISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
K + +A+ LF + E G P+ TY VL + + GR++H +IK+G E
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ N+L+D YA+ G L D + F+ D++ V WN ++SG K + F +M ++
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN-KDGPICLSLFLQM-LQM 410
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+P E T + L +C E+ +++HS I
Sbjct: 411 GFRPTEYTFSTALKSCCV---TEL-QQLHSVI 438
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 45/265 (16%)
Query: 2 KGTCISLLKSCKSMCEL----KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALR 57
+GT +S+L S+ +L +QI ++ +G + N L I + G+ +
Sbjct: 316 QGTYVSVL-GVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNAL--IDFYAKCGNLEDSRL 372
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
FD+I+ ++ +N ++ +A K +SLF Q+ + G P YT+ LK+ C+ +
Sbjct: 373 CFDYIRDKNIVCWNALLSGYANKDG-PICLSLFLQMLQMGFRPTEYTFSTALKSC-CVTE 430
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE---------------------------- 149
+ Q +H+ +++ G E + YV +SLM YA+
Sbjct: 431 LQQ---LHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAG 487
Query: 150 ----LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEA 205
G+ + +L D VSWNI I+ C R +E IE F+ M ++S +P++
Sbjct: 488 IYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHM-LQSNIRPDKY 546
Query: 206 TVVSTLTACAALRNAEVGKEIHSYI 230
T VS L+ C+ L + +G IH I
Sbjct: 547 TFVSILSLCSKLCDLTLGSSIHGLI 571
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 11/228 (4%)
Query: 6 ISLLKSCK---SMCELKQIQAL--IFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
+SLL C+ S K + AL CS L Q N + IS +G+ A ++FD
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNI--ISLYEKLGEVSLAGKVFD 73
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + + ++N +IK ++K G +A +F ++R G P+ T +L DV
Sbjct: 74 QMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASL--DVRA 131
Query: 121 GRKVHAFVIKSGLEF-DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G ++H +K GL DA+V L+ +Y L L +++FE+ P + +WN M+S +
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMS-LL 190
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ F + FF R + E++ + L + +++ ++ K++H
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLH 238
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 1/176 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++F+ + SL +N M+ +G + + F++L G ++ VLK + C
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ D+ +++H K GL+ + V NSL+ Y + G + +F++ D VSWN +
Sbjct: 228 VKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAI 287
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
I + + +A++ F M E PN+ T VS L + ++ G++IH +
Sbjct: 288 ICATAKSENPLKALKLFVSMP-EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML 342
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 9/185 (4%)
Query: 2 KGTCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
K T +S+L C +C+L I LI + DT + I G +++
Sbjct: 545 KYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC-ADTFVCNVLIDMYGKCGSIRSVMKV 603
Query: 59 FDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
F+ ++ +L + +I G + A+ F++ G PD ++ +L A G V
Sbjct: 604 FEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMV 663
Query: 119 GQGRKVHAFVIKSGL--EFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMI 175
+G + + G+ E D Y C +D+ A G L + + L E P D W +
Sbjct: 664 KEGMGLFQKMKDYGVEPEMDHYRCA--VDLLARNGYLKEAEHLIREMPFPADAPVWRTFL 721
Query: 176 SGCVR 180
GC R
Sbjct: 722 DGCNR 726
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A + D +++ + +I +++KG A+ FQ + + V P+ YTY VL
Sbjct: 215 GKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
+ G L D+G G+ +H ++KSG E SL+ MY + D +F+ + V
Sbjct: 275 ISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQV 334
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
SW +ISG V+ R + A+ F++M M KPN T+ S L C+ L E G++IH
Sbjct: 335 SWTSLISGLVQNGREEMALIEFRKM-MRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGI 393
Query: 230 I 230
+
Sbjct: 394 V 394
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 117/229 (51%), Gaps = 12/229 (5%)
Query: 8 LLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSI--GDFHYALRIFDHI 62
LL+ C +S+ +K IQA + SG + +KL+ D+S+ GD YA ++FD +
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEISG-SKLV----DASLKCGDIDYARQVFDGM 125
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
+ + +N +I K + A+ +++ + + V PD YT V KA L + +
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 123 KVHAFVIKSGLEF-DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
+ H + GLE + +V ++L+DMY + G+ + K + + ++D V +I G +
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA++ FQ M +E K +PNE T S L +C L++ GK IH +
Sbjct: 246 GEDTEAVKAFQSMLVE-KVQPNEYTYASVLISCGNLKDIGNGKLIHGLM 293
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 114/227 (50%), Gaps = 8/227 (3%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+L SC ++ ++ K I L+ SG + + L+ + S+ D +LR+F
Sbjct: 269 TYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVD--DSLRVFK 326
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I+ P+ ++ +I + G A+ F+++ D + P+++T L+ L +
Sbjct: 327 CIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEE 386
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKEL-FEETPDRDNVSWNIMISGCV 179
GR++H V K G + D Y + L+D+Y + G SD L F+ + D +S N MI
Sbjct: 387 GRQIHGIVTKYGFDRDKYAGSGLIDLYGKCG-CSDMARLVFDTLSEVDVISLNTMIYSYA 445
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ +EA++ F+RM + +PN+ TV+S L AC R E G E+
Sbjct: 446 QNGFGREALDLFERM-INLGLQPNDVTVLSVLLACNNSRLVEEGCEL 491
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 11/210 (5%)
Query: 4 TCISLLKSCKSMC---ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S L+ C ++ E +QI ++ G +D+ + L+ + D A +FD
Sbjct: 370 TLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM--ARLVFD 427
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + + + N MI ++A+ G R A+ LF+++ G+ P++ T VL A V +
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEE 487
Query: 121 GRKVHAFVIKSG--LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
G ++ K L D Y C ++D+ GRL + + L E + D V W ++S C
Sbjct: 488 GCELFDSFRKDKIMLTNDHYAC--MVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSAC 545
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
+ R E E R +E E +E T++
Sbjct: 546 -KVHRKVEMAERITRKILEI-EPGDEGTLI 573
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 120/230 (52%), Gaps = 16/230 (6%)
Query: 7 SLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLM-AISTDSSIGDFHYALRIFDHI 62
S++K C ++ EL+ Q+ + G D++ LM A S +++ D ALR+F I
Sbjct: 300 SVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLD---ALRLFKEI 356
Query: 63 Q-QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
++ ++ MI F + A+ LF +++ GV P+ +TY +L A+ +
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP---- 412
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
+VHA V+K+ E + V +L+D Y +LG++ + ++F D+D V+W+ M++G +
Sbjct: 413 SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV--GKEIHSY 229
+ AI+ F + + KPNE T S L CAA NA + GK+ H +
Sbjct: 473 GETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAAT-NASMGQGKQFHGF 520
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 94/178 (52%), Gaps = 2/178 (1%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+G A ++F I + ++ M+ +A+ G AI +F +L + G+ P+ +T+ +
Sbjct: 441 LGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSI 500
Query: 109 LKAIGCL-GDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
L +GQG++ H F IKS L+ V ++L+ MYA+ G + +E+F+ ++D
Sbjct: 501 LNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKD 560
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
VSWN MISG + + +A++ F+ M+ + K K + T + AC E G++
Sbjct: 561 LVSWNSMISGYAQHGQAMKALDVFKEMK-KRKVKMDGVTFIGVFAACTHAGLVEEGEK 617
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 97/177 (54%), Gaps = 1/177 (0%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
+F ++FD +++ ++ + +I +A+ ++LF +++ +G P+++T+ L
Sbjct: 143 NFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG 202
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
+ G G+G +VH V+K+GL+ V NSL+++Y + G + + LF++T + V+
Sbjct: 203 VLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVT 262
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
WN MISG EA+ F MR+ + + +E++ S + CA L+ +++H
Sbjct: 263 WNSMISGYAANGLDLEALGMFYSMRL-NYVRLSESSFASVIKLCANLKELRFTEQLH 318
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
Q+ ++ +GL + N L+ + G+ A +FD + S+ +N MI +A
Sbjct: 215 QVHTVVVKNGLDKTIPVSNSLINLYL--KCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 80 KGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYV 139
G A+ +F +R + V ++ V+K L ++ ++H V+K G FD +
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 140 CNSLMDMYAELGRLSDFKELFEETPDRDN-VSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+LM Y++ + D LF+E N VSW MISG ++ +EA++ F M+ +
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEI 226
+PNE T LTA + +EV ++
Sbjct: 393 V-RPNEFTYSVILTALPVISPSEVHAQV 419
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 25 IFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFR 84
I+ +G+ Q R + T SS + A +FD +Y ++ F++ G +
Sbjct: 22 IYANGVAQVR-----IYCFGTVSS-SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQ 75
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
A LF + G+ D + VLK L D GR++H IK G D V SL+
Sbjct: 76 EAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLV 135
Query: 145 DMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNE 204
D Y + D +++F+E +R+ V+W +ISG R E + F RM+ E + PN
Sbjct: 136 DTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ-PNS 194
Query: 205 ATVVSTLTACAALRNAEVGKEIHSYI 230
T + L A G ++H+ +
Sbjct: 195 FTFAAALGVLAEEGVGGRGLQVHTVV 220
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 1/179 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD A ++FD + L +N MI + +SLF+++ G PD YT V
Sbjct: 39 GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVF 98
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
L V G+++H + IK GLE D V +SL MY G+L D + + P R+ V
Sbjct: 99 SGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLV 158
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+WN +I G + E + + +M S +PN+ T V+ L++C+ L G++IH+
Sbjct: 159 AWNTLIMGNAQ-NGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHA 216
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 76/150 (50%)
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+L +N +I A+ G + L++ ++ G P+ T+ VL + L GQG+++H
Sbjct: 156 NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIH 215
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
A IK G V +SL+ MY++ G L D + F E D D V W+ MIS +
Sbjct: 216 AEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGD 275
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACA 215
EAIE F M ++ + NE ++ L AC+
Sbjct: 276 EAIELFNTMAEQTNMEINEVAFLNLLYACS 305
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 141 NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKE 200
N L++ Y G L + +++F+E PDR +WN MI+G ++ + +E + F+ M
Sbjct: 29 NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88
Query: 201 KPNEATVVSTLTACAALRNAEVGKEIHSY 229
P+E T+ S + A LR+ +G++IH Y
Sbjct: 89 -PDEYTLGSVFSGSAGLRSVSIGQQIHGY 116
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 98/184 (53%), Gaps = 1/184 (0%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
+S S G A IFD ++ L + MI A+ + + A+ +F+++ G+ PD
Sbjct: 285 VSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
+ V+ A LG + + + VH+ + +GLE + + N+L++MYA+ G L +++FE+
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
P R+ VSW+ MI+ +A+ F RM+ E+ E PNE T V L C+ E
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVE-PNEVTFVGVLYGCSHSGLVEE 463
Query: 223 GKEI 226
GK+I
Sbjct: 464 GKKI 467
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 111/229 (48%), Gaps = 4/229 (1%)
Query: 3 GTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
T + L CKS+ +KQ+ A I + + ++ L +S SS + YAL +F I
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSF--LFNLSVSSSSINLSYALNVFSSI 70
Query: 63 QQP-SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
P +N ++ ++ R I +Q++R G D +++ +LKA+ + + +G
Sbjct: 71 PSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEG 130
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
++H K D +V MDMYA GR++ + +F+E RD V+WN MI R
Sbjct: 131 MELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRF 190
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA + F+ M+ +S P+E + + ++AC N + I+ ++
Sbjct: 191 GLVDEAFKLFEEMK-DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFL 238
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 32/215 (14%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
+S G +YA +FD + + +N MI+ + + G A LF+++++ V PD
Sbjct: 157 ASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA------------------ 148
++ A G G++ R ++ F+I++ + D ++ +L+ MYA
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR 276
Query: 149 -------------ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
+ GRL D + +F++T +D V W MIS V QEA+ F+ M
Sbjct: 277 NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC 336
Query: 196 MESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
S KP+ ++ S ++ACA L + K +HS I
Sbjct: 337 C-SGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 15/181 (8%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S++ +C ++ L K + + I +GL+ + N L I+ + G +F+ +
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVNGLESELSINNAL--INMYAKCGGLDATRDVFEKMP 406
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ ++ +++ MI A + G A+SLF +++++ V P+ T+ VL G V +G+K
Sbjct: 407 RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKK 466
Query: 124 VHA-----FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-WNIMISG 177
+ A + I LE Y C ++D++ L + E+ E P NV W ++S
Sbjct: 467 IFASMTDEYNITPKLEH--YGC--MVDLFGRANLLREALEVIESMPVASNVVIWGSLMSA 522
Query: 178 C 178
C
Sbjct: 523 C 523
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 98/184 (53%), Gaps = 8/184 (4%)
Query: 47 SSIGDFHYALRIFDHIQQ-------PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVW 99
+SI D + R+ D+ ++ ++ + +I FAK A LF+Q+ + +
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL 309
Query: 100 PDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKEL 159
P+ T +L + LG + G+ VH ++I++G+E DA S +DMYA G + + +
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 160 FEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
F+ P+R+ +SW+ MI+ F+EA++ F +M+ ++ PN T VS L+AC+ N
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNV-VPNSVTFVSLLSACSHSGN 428
Query: 220 AEVG 223
+ G
Sbjct: 429 VKEG 432
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 7/226 (3%)
Query: 9 LKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
+K+C + L+ I L +GL +D L + + +G A ++FD I
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSL--VEMYAQLGTMESAQKVFDEIPVR 173
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ + V++K + K LF +R+ G+ D T ++KA G + G+ VH
Sbjct: 174 NSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVH 233
Query: 126 AFVIK-SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
I+ S ++ Y+ S++DMY + L + ++LFE + DR+ V W +ISG +C+R
Sbjct: 234 GVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA 293
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA + F++M ES PN+ T+ + L +C++L + GK +H Y+
Sbjct: 294 VEAFDLFRQMLRESI-LPNQCTLAAILVSCSSLGSLRHGKSVHGYM 338
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 118/228 (51%), Gaps = 11/228 (4%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ-- 63
+++L K++ +Q+ A + G + + + L S+ DF A F+ I
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDF--ATSSFNRIPCW 68
Query: 64 QPSLFNYNVMIKAFAKKGS--FRRAISLFQQLRE--DGVWPDNYTYPYVLKAIGCLGDVG 119
+ + ++N ++ ++K + + + L+ ++R DGV D++ + +KA LG +
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGV--DSFNLVFAIKACVGLGLLE 126
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G +H +K+GL+ D YV SL++MYA+LG + +++F+E P R++V W +++ G +
Sbjct: 127 NGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYL 186
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+ + E F MR ++ + T++ + AC + +VGK +H
Sbjct: 187 KYSKDPEVFRLFCLMR-DTGLALDALTLICLVKACGNVFAGKVGKCVH 233
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 102/221 (46%), Gaps = 11/221 (4%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T ++L SC S+ L K + + +G++ D +N I + G+ A +FD
Sbjct: 314 TLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMD--AVNFTSFIDMYARCGNIQMARTVFD 371
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + ++ +++ MI AF G F A+ F +++ V P++ T+ +L A G+V +
Sbjct: 372 MMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKE 431
Query: 121 G-RKVHAFVIKSGL--EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-WNIMIS 176
G ++ + G+ E + Y C ++D+ G + + K + P + S W ++S
Sbjct: 432 GWKQFESMTRDYGVVPEEEHYAC--MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAAL 217
C K A E +++ EK + ++S + A A +
Sbjct: 490 ACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGM 530
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 101/200 (50%), Gaps = 1/200 (0%)
Query: 5 CISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
C+SLL SCK++ L QI L G+ D KL+ S YA R+ +
Sbjct: 8 CLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPE 67
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG-VWPDNYTYPYVLKAIGCLGDVGQGRK 123
P F +N +++ +++ ++++F ++ G V+PD++++ +V+KA+ + G +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H +K GLE +V +L+ MY G + +++F+E + V+WN +I+ C R
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 184 FQEAIEFFQRMRMESKEKPN 203
A E F +M + + N
Sbjct: 188 VAGAREIFDKMLVRNHTSWN 207
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 97/205 (47%), Gaps = 4/205 (1%)
Query: 25 IFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFR 84
IF L ++ + N ++A + G+ A RIF + +++ MI A GSF
Sbjct: 194 IFDKMLVRNHTSWNVMLAGYIKA--GELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFN 251
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
+ F++L+ G+ P+ + VL A G G+ +H FV K+G + V N+L+
Sbjct: 252 ESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALI 311
Query: 145 DMYAELGRLSDFKELFEETPD-RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPN 203
DMY+ G + + +FE + R VSW MI+G + +EA+ F M P+
Sbjct: 312 DMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGV-TPD 370
Query: 204 EATVVSTLTACAALRNAEVGKEIHS 228
+ +S L AC+ E G++ S
Sbjct: 371 GISFISLLHACSHAGLIEEGEDYFS 395
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 112/258 (43%), Gaps = 36/258 (13%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
+++ + + LKQ+Q+ + SGL KL+ T + + YA IFD P+
Sbjct: 29 AVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCT-LRLCNLSYARFIFDRFSFPN 87
Query: 67 LFNYNVMIKAFAKKGSFR--RAISLFQQLREDGV-WPDNYTYPYVLKAIGCLGDVGQGRK 123
Y ++ A++ A S F+ + V P+++ YP VLK+ L
Sbjct: 88 THLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPL 147
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAE-LGRLSDFKELFEETPDRDNVSWNIMISG----- 177
VH + KSG V +L+ YA + ++ ++LF+E +R+ VSW M+SG
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 178 --------------------------CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
C + F EA+ F+RM E +PNE TVV L
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 212 TACAALRNAEVGKEIHSY 229
+ACA ++ K IH++
Sbjct: 268 SACAQTGTLQLAKGIHAF 285
Score = 84.7 bits (208), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 3/186 (1%)
Query: 32 QDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQ 91
+R+ ++ +S + GD A+ +F+ + + + ++N ++ A + G F A+SLF+
Sbjct: 189 SERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFR 248
Query: 92 QL-REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAEL 150
++ E + P+ T VL A G + + +HAF + L D +V NSL+D+Y +
Sbjct: 249 RMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKC 308
Query: 151 GRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQR-MRMESKE-KPNEATVV 208
G L + +F+ + +WN MI+ R +EAI F+ M++ + KP+ T +
Sbjct: 309 GNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFI 368
Query: 209 STLTAC 214
L AC
Sbjct: 369 GLLNAC 374
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 110/214 (51%), Gaps = 6/214 (2%)
Query: 21 IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKK 80
+ L G D T+N L + + + + + A ++FD + +P++ ++ +I +
Sbjct: 51 LHTLTLKLGFASDTFTVNHL--VISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDM 108
Query: 81 GSFRRAISLFQQLRED-GVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYV 139
G + A+S+FQ++ ED V P+ YT+ V KA L + G+ +HA + SGL + V
Sbjct: 109 GKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVV 168
Query: 140 CNSLMDMYAELGRLSDFKELFEETP--DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
+SL+DMY + + + +F+ R+ VSW MI+ + R EAIE F+
Sbjct: 169 SSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAA 228
Query: 198 -SKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ ++ N+ + S ++AC++L + GK H +
Sbjct: 229 LTSDRANQFMLASVISACSSLGRLQWGKVAHGLV 262
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 14/221 (6%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+ K+C ++ E K I A + SGL+++ + L + D A R+FD
Sbjct: 133 TFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSL--VDMYGKCNDVETARRVFD 190
Query: 61 HI--QQPSLFNYNVMIKAFAKKGSFRRAISLFQQ----LREDGVWPDNYTYPYVLKAIGC 114
+ ++ ++ MI A+A+ AI LF+ L D + + V+ A
Sbjct: 191 SMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDR--ANQFMLASVISACSS 248
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
LG + G+ H V + G E + V SL+DMYA+ G LS +++F +S+ M
Sbjct: 249 LGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSM 308
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
I + + A++ F M + + PN T++ L AC+
Sbjct: 309 IMAKAKHGLGEAAVKLFDEM-VAGRINPNYVTLLGVLHACS 348
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 3/167 (1%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
IGD H A IF + L +N +I +A+ G AI F ++ +G PD T +
Sbjct: 221 IGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSI 280
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
L A G + GR+VH+ + G+E + +V N+L+DMYA+ G L + +FE R
Sbjct: 281 LSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSV 340
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKE-KPNEATVVSTLTAC 214
N MIS + +EA+E F MES + KP+E T ++ LTAC
Sbjct: 341 ACCNSMISCLAIHGKGKEALEMFS--TMESLDLKPDEITFIAVLTAC 385
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 33/205 (16%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD + + ++ +N MI + G A LF+++ V + T+ ++K G
Sbjct: 100 ARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGK 156
Query: 115 LGDVGQGRK-----------VHAFVIKSGL------------------EFDAYVCNSLMD 145
++ + R+ V A+ + G+ E +A+V + +M
Sbjct: 157 RIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMS 216
Query: 146 MYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEA 205
Y +G + + + +F RD V WN +I+G + +AI+ F M+ E E P+
Sbjct: 217 GYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYE-PDAV 275
Query: 206 TVVSTLTACAALRNAEVGKEIHSYI 230
TV S L+ACA +VG+E+HS I
Sbjct: 276 TVSSILSACAQSGRLDVGREVHSLI 300
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 41 MAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWP 100
M + S+G+FH + I +HI +GS +A+ L+ +R GV+
Sbjct: 1 MNLEEHLSLGEFHVSNLIKNHIS----------------RGSPIQALVLYGGIRRRGVYF 44
Query: 101 DNYTYPYVLKAIGCL-GDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKEL 159
+ P +L+A C+ V G+ +H+ IK G+ D V +SL+ MY + G + +++
Sbjct: 45 PGWV-PLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKV 103
Query: 160 FEETPDRDNVSWNIMISG 177
F+E P+R+ +WN MI G
Sbjct: 104 FDEMPERNVATWNAMIGG 121
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 100/179 (55%), Gaps = 6/179 (3%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
AL++FD + +L N++++ F + G +R ++ ++ +GV + TY Y+++ GC
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIR--GC 223
Query: 115 LGD--VGQGRKVHAFVIKSGLEF-DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
D V +G+++H+ V+KSG + +V N L+D Y+ G LS F P++D +SW
Sbjct: 224 SHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISW 283
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
N ++S C ++++ F +M+ K +P+ +S L C+ + + GK+IH Y+
Sbjct: 284 NSIVSVCADYGSVLDSLDLFSKMQFWGK-RPSIRPFMSFLNFCSRNSDIQSGKQIHCYV 341
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+ A FD + + YN++I ++ G RAI L+ ++ G+ T+P VL
Sbjct: 60 GNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVL 119
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFK-ELFEETPDRDN 168
+G +VH VI G + +V ++L+ +YA L RL D +LF+E DR+
Sbjct: 120 SVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACL-RLVDVALKLFDEMLDRNL 178
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
N+++ + + E + RM +E K N T + C+ R GK++HS
Sbjct: 179 AVCNLLLRCFCQTGESKRLFEVYLRMELEGVAK-NGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 229 YI 230
+
Sbjct: 238 LV 239
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 96/198 (48%), Gaps = 3/198 (1%)
Query: 17 ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKA 76
E KQ+ +L+ SG + ++ + S+ GD ++R F+ + + + ++N ++
Sbjct: 231 EGKQLHSLVVKSGWNISNIFVANVL-VDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSV 289
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFD 136
A GS ++ LF +++ G P + L D+ G+++H +V+K G +
Sbjct: 290 CADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVS 349
Query: 137 A-YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
+ +V ++L+DMY + + + L++ P + N +++ + C ++ IE F M
Sbjct: 350 SLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLM- 408
Query: 196 MESKEKPNEATVVSTLTA 213
++ +E T+ + L A
Sbjct: 409 IDEGTGIDEVTLSTVLKA 426
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S K+C ++ + KQ+ F GL + N ++++ S A R F+ +
Sbjct: 378 SAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSD--RMEDAQRAFESLS 435
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ +L +YN + + +F +A L ++ E + +T+ +L + +G + +G +
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H+ V+K GL + VCN+L+ MY++ G + +F +R+ +SW MI+G +
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGF 555
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+E F +M +E KPNE T V+ L+AC+
Sbjct: 556 AIRVLETFNQM-IEEGVKPNEVTYVAILSACS 586
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 121/231 (52%), Gaps = 11/231 (4%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SLLKSC + K + A + ++ D N L+++ + S GD A +F+ ++
Sbjct: 67 SLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS--GDSAKAEDVFETMR 124
Query: 64 ---QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + +++ M+ + G AI +F + E G+ P++Y Y V++A VG
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 121 GRKVHAFVIKSG-LEFDAYVCNSLMDMYAE-LGRLSDFKELFEETPDRDNVSWNIMISGC 178
GR F++K+G E D V SL+DM+ + + ++F++ + + V+W +MI+ C
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
++ +EAI FF M + E ++ T+ S +ACA L N +GK++HS+
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFES-DKFTLSSVFSACAELENLSLGKQLHSW 294
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 115/236 (48%), Gaps = 11/236 (4%)
Query: 2 KGTCISLLKSCKSMCEL---KQIQALIFCSGLQQDRD--TLNKLMAISTDSSIGDFHYAL 56
K T S+ +C + L KQ+ + SGL D + ++ S D S+ D
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDD---CR 325
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSF-RRAISLFQQLREDG-VWPDNYTYPYVLKAIGC 114
++FD ++ S+ ++ +I + K + AI+LF ++ G V P+++T+ KA G
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
L D G++V K GL ++ V NS++ M+ + R+ D + FE +++ VS+N
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ G R F++A + + E + + T S L+ A + + G++IHS +
Sbjct: 446 LDGTCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQV 500
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 18/207 (8%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+QI + + GL ++ N L IS S G A R+F+ ++ ++ ++ MI FA
Sbjct: 494 EQIHSQVVKLGLSCNQPVCNAL--ISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFA 551
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG-RKVHAFV----IKSGL 133
K G R + F Q+ E+GV P+ TY +L A +G V +G R ++ IK +
Sbjct: 552 KHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKM 611
Query: 134 EFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
E Y C ++D+ G L+D E P D + W + C R E +
Sbjct: 612 EH--YAC--MVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGAC-RVHSNTELGKLAA 666
Query: 193 RMRMESKEKPNEATV---VSTLTACAA 216
R +E PNE +S + ACA
Sbjct: 667 RKILEL--DPNEPAAYIQLSNIYACAG 691
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 9/170 (5%)
Query: 63 QQPSLFN-YNV---MIKAFAKKGSFRRAISLFQQLREDGVWP-DNYTYPYVLKAIGCLGD 117
QPS+ N NV +I G R A+S + DG+ P D+ T+ +LK+ D
Sbjct: 18 SQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARD 77
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEET---PDRDNVSWNIM 174
G+ VHA +I+ +E D+ + NSL+ +Y++ G + +++FE RD VSW+ M
Sbjct: 78 FRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAM 137
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
++ R +AI+ F +E PN+ + + AC+ VG+
Sbjct: 138 MACYGNNGRELDAIKVFVEF-LELGLVPNDYCYTAVIRACSNSDFVGVGR 186
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 98/192 (51%), Gaps = 3/192 (1%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
RD ++ + ++IGD R+FD + + ++F++N +IK +A+ G + F+++
Sbjct: 119 RDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRM 178
Query: 94 REDG-VWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL-EFDAYVCNSLMDMYAELG 151
++G V P++ T VL A LG G+ VH + G + D V N+L+DMY + G
Sbjct: 179 VDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCG 238
Query: 152 RLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
+ E+F+ RD +SWN MI+G EA+ F M+ S P++ T V L
Sbjct: 239 AIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMK-NSGISPDKVTFVGVL 297
Query: 212 TACAALRNAEVG 223
AC + E G
Sbjct: 298 CACKHMGLVEDG 309
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 39/179 (21%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
D A R FD + + +N MI + + G+ A SLF Q+
Sbjct: 74 DLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMP---------------- 117
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
C R V ++ N++++ YA +G + + +F++ P+R+ S
Sbjct: 118 ---C-------RDVMSW-------------NTVLEGYANIGDMEACERVFDDMPERNVFS 154
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
WN +I G + R E + F+RM E PN+AT+ L+ACA L + GK +H Y
Sbjct: 155 WNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKY 213
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 112/217 (51%), Gaps = 13/217 (5%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLM---AISTDSSIGDF-------- 52
+ I +L SCK+ ++ QI + +G+ ++ + +++ A S + DF
Sbjct: 14 STIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEY 73
Query: 53 HYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAI 112
H F ++ P F +N +IK+ + R+A+ L + E+GV D ++ VLKA
Sbjct: 74 HVCSFSFGEVEDP--FLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKAC 131
Query: 113 GCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWN 172
LG V G ++H F+ K+GL D ++ N L+ +Y + G L +++F+ P RD+VS+N
Sbjct: 132 SRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYN 191
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
MI G V+C A E F M ME K + +++S
Sbjct: 192 SMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMIS 228
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
RD + I + +G H+A +FD + + YN M+ + + A+ +F +
Sbjct: 281 RDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDM 340
Query: 94 -REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR 152
+E + PD+ T VL AI LG + + +H ++++ + +L+DMY++ G
Sbjct: 341 EKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGS 400
Query: 153 LSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
+ +FE ++ WN MI G + A + ++ S KP++ T V L
Sbjct: 401 IQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSL-KPDDITFVGVLN 459
Query: 213 ACA 215
AC+
Sbjct: 460 ACS 462
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 74/176 (42%), Gaps = 39/176 (22%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++F + + L ++N MI + K G A LF
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLF------------------------ 275
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
DV R D +++D YA+LG + K LF++ P RD V++N M
Sbjct: 276 --DVMPRR-------------DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSM 320
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++G V+ K EA+E F M ES P++ T+V L A A L ++H YI
Sbjct: 321 MAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYI 376
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 14/175 (8%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
S G +A+ +F+ I+ S+ ++N MI A G A + Q+ + PD+ T+
Sbjct: 396 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFV 455
Query: 107 YVLKAIGCLGDVGQG-------RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKEL 159
VL A G V +G R+ H K Y C ++D+ + G + K L
Sbjct: 456 GVLNACSHSGLVKEGLLCFELMRRKH----KIEPRLQHYGC--MVDILSRSGSIELAKNL 509
Query: 160 FEETP-DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
EE P + ++V W ++ C K F+ + + +++ P+ ++S + A
Sbjct: 510 IEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYA 564
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 95/179 (53%), Gaps = 2/179 (1%)
Query: 52 FHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLK 110
F +L +F H+ ++F++N++I F++ G ++I LF ++ RE V PD++T P +L+
Sbjct: 83 FPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILR 142
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
A + G +H +K G +V ++L+ MY ++G+L ++LF++ P RD+V
Sbjct: 143 ACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVL 202
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+ M G V+ + F+ M S + +VS L AC L + GK +H +
Sbjct: 203 YTAMFGGYVQQGEAMLGLAMFREMGY-SGFALDSVVMVSLLMACGQLGALKHGKSVHGW 260
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 6/211 (2%)
Query: 8 LLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
+L++C + E K I L G + L+ + D +G +A ++FD +
Sbjct: 140 ILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD--MGKLLHARKLFDDMPV 197
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
Y M + ++G +++F+++ G D+ +L A G LG + G+ V
Sbjct: 198 RDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSV 257
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
H + I+ + N++ DMY + L +F RD +SW+ +I G
Sbjct: 258 HGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDV 317
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ + F M E E PN T + L+ACA
Sbjct: 318 VMSFKLFDEMLKEGIE-PNAVTFLGVLSACA 347
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 105/209 (50%), Gaps = 6/209 (2%)
Query: 9 LKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
LK C + L+ Q+ +L+ SG + D + L + +++G+ A ++F +
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL--VDLHANVGNIQDAHKLFHRLPNK 406
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ ++ +I+ K G A LF++L + G+ D + +LK L +G G+++H
Sbjct: 407 DIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIH 466
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
IK G E + +L+DMY + G + + LF+ +RD VSW +I G + R +
Sbjct: 467 GLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVE 526
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTAC 214
EA +F +M + +PN+ T + L+AC
Sbjct: 527 EAFRYFHKM-INIGIEPNKVTFLGLLSAC 554
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTD-SSIGDFHYALRIFDHIQQPSLFNYNVMIKAF 77
+ IQA + G+ Q+ N ++++ D + D H ++FD + + ++ + M+ +
Sbjct: 25 ESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAH---KVFDEMSERNIVTWTTMVSGY 81
Query: 78 AKKGSFRRAISLFQQLREDGVWPDN-YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFD 136
G +AI L++++ + N + Y VLKA G +GD+ G V+ + K L D
Sbjct: 82 TSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGD 141
Query: 137 AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
+ NS++DMY + GRL + F+E + SWN +ISG + EA+ F RM
Sbjct: 142 VVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRM 199
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 92/179 (51%), Gaps = 5/179 (2%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A+ +F + QP++ ++N +I F KGS RA+ +++ +G+ D + P LKA
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS---W 171
G + G+++H V+KSGLE + ++L+DMY+ G L ++F + N S W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
N M+SG + + + A+ ++ +S + T+ L C N +G ++HS +
Sbjct: 311 NSMLSGFLINEENEAALWLLLQI-YQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV 368
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%)
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
+G + A VIK G+ + ++ N+++ MY + LSD ++F+E +R+ V+W M+SG
Sbjct: 23 RGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYT 82
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ +AIE ++RM +E NE + L AC + + ++G ++ I
Sbjct: 83 SDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERI 133
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 116/237 (48%), Gaps = 10/237 (4%)
Query: 1 MKGTCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTL---NKLMAISTDSSIGDFHY 54
+ + + L + C S+ LK QI AL+ +G ++ N L IS G
Sbjct: 93 IASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNL--ISMYVRCGSLEQ 150
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRR-AISLFQQLREDGVWPDNYTYPYVLKAIG 113
A ++FD + ++ +YN + A+++ F A L + + V P++ T+ +++
Sbjct: 151 ARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCA 210
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
L DV G +++ +IK G + V S++ MY+ G L + +F+ +RD V+WN
Sbjct: 211 VLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNT 270
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
MI G ++ + ++ + FF+ M M S P + T L C+ L + +GK IH+ I
Sbjct: 271 MIVGSLKNDKIEDGLMFFRNMLM-SGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARI 326
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
SS GD A RIFD + +N MI K + F+ + GV P +TY
Sbjct: 245 SSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYS 304
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
VL LG G+ +HA +I S D + N+L+DMY G + + +F +
Sbjct: 305 IVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP 364
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ VSWN +ISGC ++A+ ++R+ S +P+E T + ++A A GK +
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Query: 227 HSYI 230
H +
Sbjct: 425 HGQV 428
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 7/208 (3%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
K I A I S D N L+ + S GD A +F I P+L ++N +I +
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYC--SCGDMREAFYVFGRIHNPNLVSWNSIISGCS 377
Query: 79 KKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
+ G +A+ ++++L R PD YT+ + A G+ +H V K G E
Sbjct: 378 ENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSV 437
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
+V +L+ MY + +++F+ +RD V W MI G R + A++FF M E
Sbjct: 438 FVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYRE 497
Query: 198 SKEKPNEATVVSTLTAC---AALRNAEV 222
K + + ++ S + AC A LR EV
Sbjct: 498 -KNRSDGFSLSSVIGACSDMAMLRQGEV 524
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 9/185 (4%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTD--SSIGDFHYALRIFDHIQQ 64
S++ +C M L+Q + + C ++ D + + D G + A IF
Sbjct: 508 SVIGACSDMAMLRQGE-VFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASN 566
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P L +N M+ A+++ G +A+S F+Q+ E+G PD TY +L A G QG+ +
Sbjct: 567 PDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFL 626
Query: 125 HAFVIKSGLE--FDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS--WNIMISGCVR 180
+ + G++ F Y C ++++ ++ G + + EL E++P +N + W ++S CV
Sbjct: 627 WNQMKEQGIKAGFKHYSC--MVNLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVN 684
Query: 181 CKRFQ 185
+ Q
Sbjct: 685 TRNLQ 689
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 1/161 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A ++FD +++ + + MI ++ G+ A+ F ++ + D ++ V+ A
Sbjct: 456 AQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSD 515
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ + QG H I++G + VC +L+DMY + G+ + +F + D WN M
Sbjct: 516 MAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSM 575
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ + ++A+ FF+++ +E+ P+ T +S L AC+
Sbjct: 576 LGAYSQHGMVEKALSFFEQI-LENGFMPDAVTYLSLLAACS 615
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 112/229 (48%), Gaps = 14/229 (6%)
Query: 7 SLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S++ +C +LK QI L G + + N LM S S G +F +
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM--SRYSKCGVLEAVKSVFHQMS 338
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ ++ ++ MI + A+S+F +R DGV+P+ T+ ++ A+ C + +G K
Sbjct: 339 ERNVVSWTTMISSNKDD-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H IK+G + V NS + +YA+ L D K+ FE+ R+ +SWN MISG +
Sbjct: 394 IHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGF 453
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV--GKEIHSYI 230
EA++ F + ++ PNE T S L A A + V G+ H+++
Sbjct: 454 SHEALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
Q+Q+ + +GL+ D N + + + S G F A R+FD + + ++N ++ ++
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRS--GSFRGARRVFDEMSFKDMISWNSLLSGLSQ 252
Query: 80 KGSFR-RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+G+F A+ +F+ + +GV D+ ++ V+ D+ R++H IK G E
Sbjct: 253 EGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLE 312
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
V N LM Y++ G L K +F + +R+ VSW MIS +A+ F MR +
Sbjct: 313 VGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDG 367
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIH 227
PNE T V + A + G +IH
Sbjct: 368 V-YPNEVTFVGLINAVKCNEQIKEGLKIH 395
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A + F+ I + ++N MI FA+ G A+ +F + + P+ YT+ VL AI
Sbjct: 426 AKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAF 484
Query: 115 LGDVG--QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWN 172
D+ QG++ HA ++K GL V ++L+DMYA+ G + + +++F E ++ W
Sbjct: 485 AEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWT 544
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+IS F+ + F +M E+ P+ T +S LTAC + G EI
Sbjct: 545 SIISAYSSHGDFETVMNLFHKMIKENV-APDLVTFLSVLTACNRKGMVDKGYEI 597
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 9 LKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
LK+C+ +LK QI SG N +M + + G F AL IF+++ P
Sbjct: 85 LKACRG--DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKA--GRFDNALCIFENLVDP 140
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG--QGRK 123
+ ++N ++ F + A++ +++ GV D +TY L C+G G G +
Sbjct: 141 DVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSF--CVGSEGFLLGLQ 195
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+ + V+K+GLE D V NS + MY+ G + +F+E +D +SWN ++SG +
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 184 FQ-EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
F EA+ F+ M E E + + S +T C + ++ ++IH
Sbjct: 256 FGFEAVVIFRDMMREGVE-LDHVSFTSVITTCCHETDLKLARQIH 299
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 13/150 (8%)
Query: 52 FHYALRIFD-HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQ---QLREDGVWPDNYTYPY 107
+ A ++FD Q+ + + N I ++ S RA+S+F+ QL G D T
Sbjct: 24 YRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCL 83
Query: 108 VLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVC--NSLMDMYAELGRLSDFKELFEETPD 165
LKA C GD+ +G ++H F SG F ++VC N++M MY + GR + +FE D
Sbjct: 84 ALKA--CRGDLKRGCQIHGFSTTSG--FTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD 139
Query: 166 RDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
D VSWN ++SG Q A+ F RM+
Sbjct: 140 PDVVSWNTILSG---FDDNQIALNFVVRMK 166
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G+ + ++F+ + Q + F + +I A++ G F ++LF ++ ++ V PD T+ VL
Sbjct: 523 GNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVL 582
Query: 110 KAIGCLGDVGQGRKVHAFVIKS-GLE--FDAYVCNSLMDMYAELGRLSDFKELFEETP 164
A G V +G ++ +I+ LE + Y C ++DM GRL + +EL E P
Sbjct: 583 TACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC--MVDMLGRAGRLKEAEELMSEVP 638
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 113/226 (50%), Gaps = 6/226 (2%)
Query: 4 TCISLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +S L +C + + E +QI AL++ G++ + + LM + S G A IF+
Sbjct: 258 TYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMY--SKCGSIEDAWTIFE 315
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ + V++ A+ GS AI F ++ + GV D VL +G
Sbjct: 316 STTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+++H+ VIK + +V N L++MY++ G L+D + +F P R+ VSWN MI+ R
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
A++ ++ M + KP + T +S L AC+ + + G+E+
Sbjct: 436 HGHGLAALKLYEEM-TTLEVKPTDVTFLSLLHACSHVGLIDKGREL 480
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 105/213 (49%), Gaps = 5/213 (2%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
K I AL SG ++ NKL I++ G +FD + ++ +I
Sbjct: 175 KMIHALAILSGYDKEISVGNKL--ITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLI 232
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ + LF +R V P++ TY L A + +G+++HA + K G+E +
Sbjct: 233 ENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELC 292
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ ++LMDMY++ G + D +FE T + D VS +++ G + +EAI+FF RM
Sbjct: 293 IESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 199 KEKPNEATVVSTLTACAALRNA-EVGKEIHSYI 230
E +A VVS + + + N+ +GK++HS +
Sbjct: 353 VEI--DANVVSAVLGVSFIDNSLGLGKQLHSLV 383
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 121 GRKVHAFVIKSGLEFDAY----------VCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
G +HA +IK+ F+ V NSL+ +YA+ G+L D +LF+E P RD +S
Sbjct: 64 GPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVIS 123
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
NI+ G +R + + +RM + AT+ L+ C V K IH+
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRML--GSGGFDHATLTIVLSVCDTPEFCLVTKMIHA 179
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 98/173 (56%), Gaps = 2/173 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKG-SFRRAISLFQQLREDGVWPDNYTYPYVLKAIG 113
A IF+ + + YN M++ F++ G + +R++ ++ ++ G P+ T+ V+ A
Sbjct: 225 AEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACS 284
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
L G++VHA ++KSG+ + +SL+DMYA+ G ++D + +F++ +++ SW
Sbjct: 285 VLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTS 344
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
MI G + +EA+E F RM+ E + +PN T + L+AC+ + G EI
Sbjct: 345 MIDGYGKNGNPEEALELFTRMK-EFRIEPNYVTFLGALSACSHSGLVDKGYEI 396
Score = 93.6 bits (231), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 111/248 (44%), Gaps = 38/248 (15%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
K+I A I +G Q D + KL+ + G YA ++FD + +P+L YN MI +
Sbjct: 54 KKIHADIIKTGFQPDLNISIKLLILHL--KCGCLSYARQVFDELPKPTLSAYNYMISGYL 111
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV-----GQGRKVHAFVIKSGL 133
K G + + L Q++ G D YT VLKA G R VHA +IK +
Sbjct: 112 KHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDV 171
Query: 134 EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQR 193
E D + +L+D Y + G+L + +FE D + V MISG + ++A E F
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNT 231
Query: 194 MRM-----------------ESKEK--------------PNEATVVSTLTACAALRNAEV 222
++ E+ ++ PN +T S + AC+ L + EV
Sbjct: 232 TKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEV 291
Query: 223 GKEIHSYI 230
G+++H+ I
Sbjct: 292 GQQVHAQI 299
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+K+HA +IK+G + D + L+ ++ + G LS +++F+E P ++N MISG ++
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
+E + QRM S EK + T+ L A
Sbjct: 113 HGLVKELLLLVQRMSY-SGEKADGYTLSMVLKA 144
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 105/233 (45%), Gaps = 32/233 (13%)
Query: 30 LQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISL 89
+ + D ++ + I+ + + D A + FD + + S+ ++N M+ +A+ G A+ L
Sbjct: 192 MMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRL 251
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM--- 146
F + GV P+ T+ V+ A D R + + + + + +V +L+DM
Sbjct: 252 FNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAK 311
Query: 147 -----------------------------YAELGRLSDFKELFEETPDRDNVSWNIMISG 177
Y +G +S ++LF+ P R+ VSWN +I+G
Sbjct: 312 CRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAG 371
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ AIEFF+ M KP+E T++S L+AC + + E+G I YI
Sbjct: 372 YAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYI 424
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 53 HYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAI 112
+Y IFD + P++F N M K F+K + L++Q G+ PD +++P V+K+
Sbjct: 57 YYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA 116
Query: 113 GCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWN 172
G G + Q A V K G D YV N +MDMY + + +++F++ R WN
Sbjct: 117 GRFGILFQ-----ALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWN 171
Query: 173 IMISGCVRCKRFQEAIEFFQRM 194
+MISG + +EA + F M
Sbjct: 172 VMISGYWKWGNKEEACKLFDMM 193
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAIS 88
G Q++ T N + IS + IGD A ++FD + + ++ ++N +I +A G AI
Sbjct: 326 GTQRNLVTWNAM--ISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIE 383
Query: 89 LFQQLREDG-VWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMY 147
F+ + + G PD T VL A G + D+ G + ++ K+ ++ + SL+ MY
Sbjct: 384 FFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMY 443
Query: 148 AELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATV 207
A G L + K +F+E +RD VS+N + + E + +M+ E E P+ T
Sbjct: 444 ARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE-PDRVTY 502
Query: 208 VSTLTAC 214
S LTAC
Sbjct: 503 TSVLTAC 509
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 74/144 (51%), Gaps = 7/144 (4%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNK---LMAISTDSSIGDFHYALRIFD 60
T IS+L +C M +L+ ++ +++++ LN I + G+ A R+FD
Sbjct: 400 TMISVLSACGHMADLELGDCIV--DYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFD 457
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+++ + +YN + AFA G ++L +++++G+ PD TY VL A G + +
Sbjct: 458 EMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKE 517
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLM 144
G+++ I++ L D Y C L+
Sbjct: 518 GQRIFK-SIRNPLA-DHYACMDLL 539
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 8/163 (4%)
Query: 69 NYNVMIKAFAKKGS---FRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+++ ++ A A+ GS R A+ L DG PD ++L+ G G V R++H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELIN----DGEKPDASPLVHLLRVSGNYGYVSLCRQLH 78
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
+V K G + + NSLM Y L D ++F+E PD D +SWN ++SG V+ RFQ
Sbjct: 79 GYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQ 138
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
E I F + S PNE + + L ACA L + +G IHS
Sbjct: 139 EGICLFLELH-RSDVFPNEFSFTAALAACARLHLSPLGACIHS 180
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 14 SMCELKQIQALIFCSGLQQDRDTLNKLMAI-STDSSIGDFHYALRIFDHIQQPSLFNYNV 72
S+C +Q+ + G + N LM T S+ D H ++FD + P + ++N
Sbjct: 72 SLC--RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAH---KVFDEMPDPDVISWNS 126
Query: 73 MIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSG 132
++ + + G F+ I LF +L V+P+ +++ L A L G +H+ ++K G
Sbjct: 127 LVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLG 186
Query: 133 LE-FDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
LE + V N L+DMY + G + D +F+ ++D VSWN +++ C R + + + FF
Sbjct: 187 LEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFF 246
Query: 192 QRMRMESKEKPNEATVV 208
+M PN TV
Sbjct: 247 HQM-------PNPDTVT 256
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 90/183 (49%), Gaps = 2/183 (1%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
D T N+L+ S GDF+ A ++ + P+ ++N ++ + A F +
Sbjct: 253 DTVTYNELIDAFVKS--GDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 93 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR 152
+ GV D Y+ VL A+ L V G +HA K GL+ V ++L+DMY++ G
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGM 370
Query: 153 LSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
L + +F P ++ + WN MISG R EAI+ F +++ E KP+ T ++ L
Sbjct: 371 LKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLA 430
Query: 213 ACA 215
C+
Sbjct: 431 VCS 433
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 7/202 (3%)
Query: 26 FCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRR 85
FCS LQ K M I GD +A ++FD I + + ++ MI F++ G
Sbjct: 43 FCSNLQL------KDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPD 96
Query: 86 AISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMD 145
A+ LF+++ + V + +TY VLK+ LG + +G ++H V K + V ++L+
Sbjct: 97 ALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLS 156
Query: 146 MYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEA 205
+YA G++ + + F+ +RD VSWN MI G + FQ M E K KP+
Sbjct: 157 LYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGK-KPDCF 215
Query: 206 TVVSTLTACAALRNAEVGKEIH 227
T S L A ++ E+ E+H
Sbjct: 216 TFGSLLRASIVVKCLEIVSELH 237
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGS-FRRAISLFQQLREDGVWPDNYTYPYV 108
G A ++ + ++ L + +I F+++ + A +F+ + D +
Sbjct: 263 GSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSM 322
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSG-LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
LK + V GR++H F +KS + FD + NSL+DMYA+ G + D FEE ++D
Sbjct: 323 LKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKD 382
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
SW +I+G R F++AI+ + RM E + KPN+ T +S L+AC+ E+G +I+
Sbjct: 383 VRSWTSLIAGYGRHGNFEKAIDLYNRMEHE-RIKPNDVTFLSLLSACSHTGQTELGWKIY 441
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 110/233 (47%), Gaps = 19/233 (8%)
Query: 7 SLLKSCKSMCELK---QIQALI---FCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
S+LKSCK + LK QI + C+G R L L A G A FD
Sbjct: 118 SVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYA-----RCGKMEEARLQFD 172
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA---IGCLGD 117
+++ L ++N MI + + SLFQ + +G PD +T+ +L+A + CL
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 232
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
V + +H IK G + + SL++ Y + G L++ +L E T RD +S +I+G
Sbjct: 233 VSE---LHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITG 289
Query: 178 CVRCKR-FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+ +A + F+ M + K K +E V S L C + + +G++IH +
Sbjct: 290 FSQQNNCTSDAFDIFKDM-IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGF 341
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H I +G + + + L+D+Y + G + ++LF+ RD VSW MIS RC
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+A+ F+ M E K N+ T S L +C L + G +IH +
Sbjct: 94 HPDALLLFKEMHRED-VKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 3/168 (1%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD A +F + + VMI + F A SL + G+ P N TY +L
Sbjct: 414 GDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLL 473
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVC--NSLMDMYAELGRLSDFKELFEETPDRD 167
+ G ++ QG+ +H + K+ +D + NSL+ MYA+ G + D E+F + +D
Sbjct: 474 SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD 533
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
VSWN MI G +A+ F+ M ++S +KPN T + L+AC+
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEM-LDSGKKPNSVTFLGVLSACS 580
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 98/249 (39%), Gaps = 69/249 (27%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLRE--DGVWPDNYTYPY 107
GD A R+F + + ++ ++ MI FA +R A+ LF ++++ D V P+ T
Sbjct: 245 GDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLIS 304
Query: 108 VLKAIGCLGDVGQ--GRKVHAFVIKSGLE------------------------------- 134
+ A G LG + G ++HA VI +G E
Sbjct: 305 LAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE 364
Query: 135 -FDAYVCN--------------------------------SLMDMYAELGRLSDFKELFE 161
FD CN S++D Y E G +S LF+
Sbjct: 365 SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQ 424
Query: 162 ETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAE 221
+ D+D V+W +MISG V+ + F EA M + KP +T L++ A N +
Sbjct: 425 KLHDKDGVTWTVMISGLVQNELFAEAASLLSDM-VRCGLKPLNSTYSVLLSSAGATSNLD 483
Query: 222 VGKEIHSYI 230
GK IH I
Sbjct: 484 QGKHIHCVI 492
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 11/179 (6%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A+ +FD + + ++ ++N ++ + G +A +F + P + G
Sbjct: 157 AVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM------PSRDVVSWNAMIKGY 210
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ + G F S E + S++ Y G + + LF E P+R+ VSW M
Sbjct: 211 IENDGMEEAKLLFGDMS--EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKE-KPNEATVVSTLTACAAL--RNAEVGKEIHSYI 230
ISG + ++EA+ F M+ + PN T++S AC L +G+++H+ +
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQV 327
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 141 NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
SL+ YA+ G L + + LFE P+R+ V+ N M++G V+C+R EA F+ M
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREM 134
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 5/197 (2%)
Query: 7 SLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
SLL +C ++ Q+ A SG++ + KL+ + ++ + ++ I
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDIL 107
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P +NV+I ++AK F I+ ++++ G+ PD +TYP VLKA G DV GR
Sbjct: 108 HP--LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VH + S + YVCN+L+ MY + + LF+ +RD VSWN +I+
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 184 FQEAIEFFQRMRMESKE 200
+ EA E F +M E
Sbjct: 226 WSEAFELFDKMWFSGVE 242
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 5/202 (2%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAIS 88
+RD ++ I+ +S G + A +FD + + S+ +N++ + G++ A+
Sbjct: 207 ERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALG 266
Query: 89 LFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA 148
L ++R D LKA +G + G+++H I S + V N+L+ MY+
Sbjct: 267 LISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYS 326
Query: 149 ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
+ L +F +T + +WN +ISG + + +EA + M + + +PN T+
Sbjct: 327 KCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREM-LVAGFQPNSITLA 385
Query: 209 STLTACAALRNAEVGKEIHSYI 230
S L CA + N + GKE H YI
Sbjct: 386 SILPLCARIANLQHGKEFHCYI 407
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 13/225 (5%)
Query: 9 LKSCKSMCEL---KQIQALIFCS---GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
LK+C + + K+I L S G+ R+TL I+ S D +AL +F
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTL-----ITMYSKCKDLRHALIVFRQT 341
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
++ SL +N +I +A+ A L +++ G P++ T +L + ++ G+
Sbjct: 342 EENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGK 401
Query: 123 KVHAFVIKSGLEFD-AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
+ H ++++ D + NSL+D+YA+ G++ K++ + RD V++ +I G
Sbjct: 402 EFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQ 461
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
A+ F+ M S KP+ TVV+ L+AC+ + G+ +
Sbjct: 462 GEGGVALALFKEM-TRSGIKPDHVTVVAVLSACSHSKLVHEGERL 505
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G +VHA I SG+E+ + + L+ Y+ ++ + + E + + WN++I+ +
Sbjct: 62 GVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAK 121
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ F+E I ++RM + +P+ T S L AC + G+ +H I
Sbjct: 122 NELFEEVIAAYKRM-VSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSI 170
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 4/211 (1%)
Query: 21 IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKK 80
+ L +GL D N LM + + A +F H++ + ++N ++
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGE--NLSSAECVFTHMEHRDIVSWNTIMTKCLAN 267
Query: 81 GSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVC 140
G R+++ F+ + G D T+ V+ A + ++ G +H VIKSG +A+V
Sbjct: 268 GHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVS 327
Query: 141 --NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
NS++ MY++ G + +FEE RD +S N +++G F+EA +M+
Sbjct: 328 VGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVD 387
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
K +P+ ATVVS + C L + G+ +H Y
Sbjct: 388 KIQPDIATVVSITSICGDLSFSREGRAVHGY 418
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 110/229 (48%), Gaps = 6/229 (2%)
Query: 8 LLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
++ +C S+ EL + + L+ SG + IS S GD A +F+ +
Sbjct: 295 VISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVC 354
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLRE-DGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ + N ++ FA G F A + Q++ D + PD T + G L +GR
Sbjct: 355 RDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRA 414
Query: 124 VHAFVIKSGLEFDAY-VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
VH + ++ ++ A V NS++DMY + G + + LF+ T RD VSWN MIS +
Sbjct: 415 VHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNG 474
Query: 183 RFQEAIEFFQRMRME-SKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+A F+ + E S K + +TV++ LT+C + + GK +H ++
Sbjct: 475 FTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL 523
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 88/165 (53%), Gaps = 3/165 (1%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
D A+++F I P+L ++N +I A ++ + R LF+ L+ + P+ T+ +L
Sbjct: 631 DIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLE---PNEITFVGLLS 687
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
A LG G + H +I+ G + + +V +L+DMY+ G L ++F + +
Sbjct: 688 ASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISA 747
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
WN +IS ++A+E F+ + S+ +PN+++ +S L+AC+
Sbjct: 748 WNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACS 792
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 105/202 (51%), Gaps = 3/202 (1%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAIS 88
GL QD T +KL+ + G+ + +FD +++ + +N MI A + G + A+
Sbjct: 117 GLLQDLATSSKLLTFYGRT--GELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVG 174
Query: 89 LFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA 148
LF ++ G D+ T A+ L + +H I++GL D+ +CN+LM++YA
Sbjct: 175 LFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYA 234
Query: 149 ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
+ LS + +F RD VSWN +++ C+ ++++++F+ M S ++ + T
Sbjct: 235 KGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSM-TGSGQEADTVTFS 293
Query: 209 STLTACAALRNAEVGKEIHSYI 230
++AC+++ +G+ +H +
Sbjct: 294 CVISACSSIEELTLGESLHGLV 315
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 86/184 (46%), Gaps = 6/184 (3%)
Query: 49 IGDFHYA-LRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYP 106
+GD A LR+ + L ++N +I A G ++ FQ + RE + D T
Sbjct: 526 LGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLL 585
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
+ A G LG V QGR H IKS E D + N+L+ MY + ++F D
Sbjct: 586 GTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 645
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ SWN +IS + K +E + F+ +++E PNE T V L+A L + G +
Sbjct: 646 NLCSWNCVISALSQNKAGREVFQLFRNLKLE----PNEITFVGLLSASTQLGSTSYGMQA 701
Query: 227 HSYI 230
H ++
Sbjct: 702 HCHL 705
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%)
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
R VH F +K GL D + L+ Y G L LF+E ++D + WN MI+ +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 182 KRFQEAIEFFQRMRMESKE 200
R+ A+ F M + E
Sbjct: 167 GRYIAAVGLFIEMIHKGNE 185
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 4/222 (1%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
SLL + + L+ +QA I GL + N L IS S G A +F+ + +
Sbjct: 394 SLLATSLDLDVLEMVQACIIKFGLSSKIEISNAL--ISAYSKNGQIEKADLLFERSLRKN 451
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGV--WPDNYTYPYVLKAIGCLGDVGQGRKV 124
L ++N +I F G + F L E V PD YT +L + G +
Sbjct: 452 LISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQT 511
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
HA+V++ G + + N+L++MY++ G + + E+F + ++D VSWN +IS R
Sbjct: 512 HAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEG 571
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ A+ ++ M+ E K P+ AT + L+AC+ E G EI
Sbjct: 572 ENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEI 613
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 103/188 (54%), Gaps = 9/188 (4%)
Query: 43 ISTDSSIGDFHYALRIFDHI-QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPD 101
+S +GD YA +FD + ++ + +N MI + G ++ LF+++ + GV D
Sbjct: 130 LSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHD 189
Query: 102 NYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFE 161
+ + +L ++ G + G++VH+ VIK+G + V N+L+ MY + D +FE
Sbjct: 190 KFGFATIL-SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE 248
Query: 162 ET--PDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
ET RD V++N++I G KR E++ F++M +E+ +P + T VS + +C+
Sbjct: 249 ETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKM-LEASLRPTDLTFVSVMGSCSC--- 303
Query: 220 AEVGKEIH 227
A +G ++H
Sbjct: 304 AAMGHQVH 311
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQG 121
+L N N + + G R A+ LF + R + PD Y+ + L D G
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC 181
+VH + I+SGL ++V N+L+ +Y LG L+ K+ F+E + D SW ++S +
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 182 KRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
+ A E F +M E+ + A + +T C
Sbjct: 137 GDIEYAFEVFDKM----PERDDVAIWNAMITGC 165
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 19/208 (9%)
Query: 14 SMCEL------KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH--IQQP 65
SMC+ KQ+ +L+ +G +N L+ + + + A +F+ +
Sbjct: 198 SMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQV--VVDACLVFEETDVAVR 255
Query: 66 SLFNYNVMIKAFAKKGSFRRAISL--FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+NV+I A F+R SL F+++ E + P + T+ V+ + C G +
Sbjct: 256 DQVTFNVVIDGLA---GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSC---AAMGHQ 309
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
VH IK+G E V N+ M MY+ ++FE ++D V+WN MIS + K
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL 369
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTL 211
+ A+ ++RM + KP+E T S L
Sbjct: 370 GKSAMSVYKRMHIIGV-KPDEFTFGSLL 396
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 111/211 (52%), Gaps = 3/211 (1%)
Query: 16 CELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIK 75
C + + A + SG+ + KL+ + G A ++FD + + + VMI
Sbjct: 33 CRGRVLHAHLVTSGIARLTRIAAKLVTFYVEC--GKVLDARKVFDEMPKRDISGCVVMIG 90
Query: 76 AFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEF 135
A A+ G ++ ++ F+++ +DG+ D + P +LKA L D G+ +H V+K E
Sbjct: 91 ACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYES 150
Query: 136 DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
DA++ +SL+DMY++ G + + +++F + ++D V +N MISG + EA+ + M+
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK 210
Query: 196 MESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ KP+ T + ++ + +RN E EI
Sbjct: 211 LLGI-KPDVITWNALISGFSHMRNEEKVSEI 240
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 85/163 (52%), Gaps = 1/163 (0%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+P + ++ +I +A F+Q+ G++P++ T +L A L + G++
Sbjct: 250 KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKE 309
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H + + +GLE +V ++L+DMY + G +S+ LF +TP + V++N MI
Sbjct: 310 IHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGL 369
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+A+E F +M + EK + T + LTAC+ ++G+ +
Sbjct: 370 ADKAVELFDQME-ATGEKLDHLTFTAILTACSHAGLTDLGQNL 411
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 2/211 (0%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+ + L+ G+ D + L + S G A R++ +Q S+ ++ +A
Sbjct: 266 EPLHCLVVKCGMVNDISVVTSL--VCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYA 323
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+KG A+ F + R+ + D +L + G +H + IKSGL
Sbjct: 324 EKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTL 383
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
V N L+ MY++ + LFE+ + +SWN +ISGCV+ R A E F +M +
Sbjct: 384 VVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTG 443
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
P+ T+ S L C+ L +GKE+H Y
Sbjct: 444 GLLPDAITIASLLAGCSQLCCLNLGKELHGY 474
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
Query: 17 ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKA 76
+++Q+Q + SGL DR K ++ G A +FD + + +N +I
Sbjct: 68 QVEQVQTHLTKSGL--DRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICG 125
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFD 136
+++ G A LF + + G P T +L G G V QGR VH KSGLE D
Sbjct: 126 YSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELD 185
Query: 137 AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRM 196
+ V N+L+ Y++ L + LF E D+ VSWN MI + +EAI F+ M
Sbjct: 186 SQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM-F 244
Query: 197 ESKEKPNEATVVSTLTA 213
E + + T+++ L+A
Sbjct: 245 EKNVEISPVTIINLLSA 261
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 4/188 (2%)
Query: 28 SGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAI 87
SGL +N L I+ S D L +F+ +Q+ L ++N +I + G A
Sbjct: 376 SGLCTKTLVVNGL--ITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAF 433
Query: 88 SLFQQLR-EDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM 146
+F Q+ G+ PD T +L L + G+++H + +++ E + +VC +L+DM
Sbjct: 434 EVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDM 493
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
YA+ G + +F+ +WN MISG A+ + MR E KP+E T
Sbjct: 494 YAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMR-EKGLKPDEIT 552
Query: 207 VVSTLTAC 214
+ L+AC
Sbjct: 553 FLGVLSAC 560
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 92/226 (40%), Gaps = 21/226 (9%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T SLL C +C L K++ + + + L I + G+ A +F
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTAL--IDMYAKCGNEVQAESVFK 508
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I+ P +N MI ++ G RA+S + ++RE G+ PD T+ VL A G V +
Sbjct: 509 SIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDE 568
Query: 121 GR-----KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKE----LFEETPDRDNVSW 171
G+ + F I L+ A M LGR F E +++ D+ W
Sbjct: 569 GKICFRAMIKEFGISPTLQHYAL-------MVGLLGRACLFTEALYLIWKMDIKPDSAVW 621
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAAL 217
++S C+ + + ++M M + ++S L A A+
Sbjct: 622 GALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAM 667
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 89/172 (51%), Gaps = 1/172 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A +F+ I +P L + +I +++ G+ + A+ LF +LR G PD VL +
Sbjct: 261 ACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAE 320
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
L D G++VH++VI+ GLE D VC++L+DMY++ G L LF P+++ VS+N +
Sbjct: 321 LSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSL 380
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
I G A E F + +E P+E T + L C G+EI
Sbjct: 381 ILGLGLHGFASTAFEKFTEI-LEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 3/213 (1%)
Query: 18 LKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAF 77
L+ I + SGL D+ + + + S G A ++F I P L +NVMI +
Sbjct: 125 LRCIHGIAIVSGLGFDQICGSAI--VKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGY 182
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
G + + I+LF ++ G P+ YT + + + VHAF +K L+ +
Sbjct: 183 GCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHS 242
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
YV +L++MY+ ++ +F + D V+ + +I+G RC +EA+ F +RM
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS 302
Query: 198 SKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
K KP+ V L +CA L ++ GKE+HSY+
Sbjct: 303 GK-KPDCVLVAIVLGSCAELSDSVSGKEVHSYV 334
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 86/179 (48%), Gaps = 1/179 (0%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
D A ++FD + S+F +N +I+A+AK F +SLF Q+ PDN+TY + +
Sbjct: 55 DLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLAR 114
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
D R +H I SGL FD ++++ Y++ G + + +LF PD D
Sbjct: 115 GFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLAL 174
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
WN+MI G C + + I F M+ +PN T+V+ + V +H++
Sbjct: 175 WNVMILGYGCCGFWDKGINLFNLMQHRG-HQPNCYTMVALTSGLIDPSLLLVAWSVHAF 232
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 81/141 (57%), Gaps = 1/141 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG-VWPDNYTYPYVLKAIG 113
A +FD + + ++ + MI + K G F LF ++R++G V ++ T + KA
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
+G ++H V + LEFD ++ NSLM MY++LG + + K +F ++D+VSWN
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 174 MISGCVRCKRFQEAIEFFQRM 194
+I+G V+ K+ EA E F++M
Sbjct: 347 LITGLVQRKQISEAYELFEKM 367
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 1/177 (0%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
S G+ + +F + + + MI AF G + A+ F ++ + V P++YT+
Sbjct: 383 SGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFS 442
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
VL A L D+ +G ++H V+K + D V NSL+ MY + G +D ++F +
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEP 502
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
+ VS+N MISG ++A++ F + KE PN T ++ L+AC + ++G
Sbjct: 503 NIVSYNTMISGYSYNGFGKKALKLFSMLESSGKE-PNGVTFLALLSACVHVGYVDLG 558
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 8/181 (4%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
D A +F I + + +Y MI F + G F A L+ + P + V
Sbjct: 128 DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAET------PVKFR-DSVAS 180
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYV-CNSLMDMYAELGRLSDFKELFEETPDRDNV 169
+ G + G+ A + G+ V C+S++ Y ++GR+ D + LF+ +R+ +
Sbjct: 181 NVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVI 240
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+W MI G + F++ F RMR E K N T+ AC G +IH
Sbjct: 241 TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGL 300
Query: 230 I 230
+
Sbjct: 301 V 301
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+ +S S + E QI + + D N L +S G+ + A +IF I
Sbjct: 443 SVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSL--VSMYCKCGNTNDAYKIFSCIS 500
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+P++ +YN MI ++ G ++A+ LF L G P+ T+ +L A +G V G K
Sbjct: 501 EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWK 560
Query: 124 V-----HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
++ I+ G D Y C ++D+ G L D L P
Sbjct: 561 YFKSMKSSYNIEPGP--DHYAC--MVDLLGRSGLLDDASNLISTMP 602
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 49/232 (21%)
Query: 4 TCISLLKSCKSMC---ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T + K+C+ E QI L+ L+ D N LM++ S +G A +F
Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMY--SKLGYMGEAKAVFG 334
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGV-WPDNYTYPYVLKAIGCLGDV 118
++ ++N +I ++ A LF+++ +D V W D
Sbjct: 335 VMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTD----------------- 377
Query: 119 GQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGC 178
++ ++ G +S ELF P++DN++W MIS
Sbjct: 378 ------------------------MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
V ++EA+ +F +M ++ + PN T S L+A A+L + G +IH +
Sbjct: 414 VSNGYYEEALCWFHKM-LQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRV 464
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 108/229 (47%), Gaps = 14/229 (6%)
Query: 5 CISLLKSCK------SMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRI 58
C SL KS S C L Q+ +L SGL + L+ + ++ + D+ ++
Sbjct: 268 CSSLYKSSDLVPNEVSKCCL-QLHSLTVKSGLVTQTEVATALIKVYSEM-LEDYTDCYKL 325
Query: 59 FDHIQQ-PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
F + + +N +I AFA RAI LF QLR++ + PD YT+ VLKA L
Sbjct: 326 FMEMSHCRDIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVT 384
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
+HA VIK G D + NSL+ YA+ G L +F++ RD VSWN M+
Sbjct: 385 ARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKA 444
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ + FQ+M + P+ AT ++ L+AC+ E G I
Sbjct: 445 YSLHGQVDSILPVFQKMDI----NPDSATFIALLSACSHAGRVEEGLRI 489
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 12/236 (5%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHY-ALRIFDHI 62
T S+L SC+ KQ+ L GL N ++++ G Y A +F+ I
Sbjct: 163 TLSSVLTSCRYE-PGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAI 221
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
+ +L +N MI AF ++AI +F ++ DGV D T + ++ D+
Sbjct: 222 KFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNE 281
Query: 123 ------KVHAFVIKSGLEFDAYVCNSLMDMYAE-LGRLSDFKELFEETPD-RDNVSWNIM 174
++H+ +KSGL V +L+ +Y+E L +D +LF E RD V+WN +
Sbjct: 282 VSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGI 341
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
I+ + AI F ++R E K P+ T S L ACA L A IH+ +
Sbjct: 342 ITA-FAVYDPERAIHLFGQLRQE-KLSPDWYTFSSVLKACAGLVTARHALSIHAQV 395
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 74 IKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL 133
++ + G RRA+SLF + Y + +A ++ G +H ++
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVE--LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPY 90
Query: 134 EF--DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
+ + + N L++MYA+ G + +++F+ P+R+ VSW +I+G V+ QE F
Sbjct: 91 CYSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF 150
Query: 192 QRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
M S PNE T+ S LT+C E GK++H
Sbjct: 151 SSML--SHCFPNEFTLSSVLTSC----RYEPGKQVH 180
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 109/246 (44%), Gaps = 38/246 (15%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAK 79
Q A I SG Q D KL I++ S+ F+ A + I P++++++ +I A K
Sbjct: 36 QAHARILKSGAQNDGYISAKL--IASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 80 KGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYV 139
F ++I +F ++ G+ PD++ P + K L G+++H SGL+ DA+V
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 140 CNSLMDMYAELGRLSDFKELFEETPDRDN------------------------------- 168
S+ MY GR+ D +++F+ D+D
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 169 ----VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
VSWN ++SG R +EA+ FQ++ P++ TV S L + +G+
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 225 EIHSYI 230
IH Y+
Sbjct: 273 LIHGYV 278
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 93/165 (56%), Gaps = 5/165 (3%)
Query: 55 ALRIFDHIQQPSL----FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
AL +F+ ++ ++ ++ +I A+ G A+ LF++++ GV P++ T P +L
Sbjct: 337 ALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLP 396
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
A G + +G GR H F ++ L + +V ++L+DMYA+ GR++ + +F P ++ V
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 171 WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
WN +++G + +E + F+ + M ++ KP+ + S L+AC
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESL-MRTRLKPDFISFTSLLSACG 500
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 92/201 (45%), Gaps = 36/201 (17%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ ++ ++N ++ F + G + A+ +FQ++ G PD T VL ++G + GR
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF----------------------- 160
+H +VIK GL D V ++++DMY + G + LF
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 161 ------------EETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
E+T + + VSW +I+GC + + EA+E F+ M++ + KPN T+
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV-AGVKPNHVTIP 392
Query: 209 STLTACAALRNAEVGKEIHSY 229
S L AC + G+ H +
Sbjct: 393 SMLPACGNIAALGHGRSTHGF 413
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
AL++FD + + S +Y +IK +A+ + A+ LF+++R G+ + T V+ A
Sbjct: 126 ALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSH 185
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI- 173
LG + R + + IK LE +V +L+ MY L D ++LF+E P+R+ V+WN+
Sbjct: 186 LGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVM 245
Query: 174 ------------------------------MISGCVRCKRFQEAIEFFQRMRMESKEKPN 203
MI GC+R + EA+ ++ M + KP+
Sbjct: 246 LNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEM-LRCGMKPS 304
Query: 204 EATVVSTLTACAALRNAEVGKEIHSYI 230
E +V L+A A + G ++H I
Sbjct: 305 EVMMVDLLSASARSVGSSKGLQLHGTI 331
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 5/179 (2%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYV 108
G A +FD +F++N MI +A+ S + A+ LF+++ V PD T V
Sbjct: 385 GMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSV 444
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
AI LG + +G++ H ++ S + + + +++DMYA+ G + +F +T + +
Sbjct: 445 FSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISS 504
Query: 169 VS---WNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
+ WN +I G + A++ + ++ KPN T V L+AC E+GK
Sbjct: 505 STISPWNAIICGSATHGHAKLALDLYSDLQ-SLPIKPNSITFVGVLSACCHAGLVELGK 562
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 93/215 (43%), Gaps = 31/215 (14%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
S G A +FD I + + ++ MI +K A+ + ++ G+ P
Sbjct: 250 SKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMV 309
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGL-------------------------EFDAYVC- 140
+L A +G ++H ++K G +F+A V
Sbjct: 310 DLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKD 369
Query: 141 -----NSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
N+L+ + + G + +E+F++T D+D SWN MISG + Q A+ F+ M
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 196 MESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
S+ KP+ T+VS +A ++L + E GK H Y+
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL 464
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 53/78 (67%)
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
DV GR++H V+KSGL+ + Y+CNS+++MYA+ L+D + +F + D+ S+NIM+
Sbjct: 56 DVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVD 115
Query: 177 GCVRCKRFQEAIEFFQRM 194
G VR +R +A++ F M
Sbjct: 116 GYVRSRRLWDALKLFDVM 133
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 95/177 (53%), Gaps = 1/177 (0%)
Query: 54 YALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIG 113
+A +FD + Q L + N + + + G+ ++LF Q+ ++T+ VL A
Sbjct: 36 HADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACS 95
Query: 114 CLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNI 173
L GR+VHA +IK G E +L+DMY++ G L D +FE ++D VSWN
Sbjct: 96 LLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNA 155
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
++SG +R + +EA+ F M E E +E T+ S + CA+L+ + GK++H+ +
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVE-ISEFTLSSVVKTCASLKILQQGKQVHAMV 211
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 106/210 (50%), Gaps = 10/210 (4%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+Q+ AL+ G + T++K I S G ++R+F+ +++ L ++N ++ F
Sbjct: 104 RQVHALMIKQG--AETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFL 161
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G + A+ +F + + V +T V+K L + QG++VHA V+ +G +
Sbjct: 162 RNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL-VV 220
Query: 139 VCNSLMDMYAELGRLSDFKELFEE-TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
+ +++ Y+ +G +++ +++ D V N +ISGC+R + ++EA R R
Sbjct: 221 LGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-- 278
Query: 198 SKEKPNEATVVSTLTACAALRNAEVGKEIH 227
PN + S+L C+ + +GK+IH
Sbjct: 279 ----PNVRVLSSSLAGCSDNSDLWIGKQIH 304
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 107/227 (47%), Gaps = 13/227 (5%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S++K+C S+ L KQ+ A++ +G +D L M IS SS+G + A+++++
Sbjct: 187 TLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAM-ISFYSSVGLINEAMKVYN 243
Query: 61 HIQ-QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ N +I + +++ A L + R P+ L D+
Sbjct: 244 SLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLW 298
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G+++H +++G D+ +CN LMDMY + G++ + +F P + VSW MI
Sbjct: 299 IGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYA 358
Query: 180 RCKRFQEAIEFFQRMRME-SKEKPNEATVVSTLTACAALRNAEVGKE 225
+A+E F+ M E S PN T + ++ACA + GKE
Sbjct: 359 VNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKE 405
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 96/174 (55%), Gaps = 2/174 (1%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
IS + +GD A ++F + + + ++ +I + ++GS RA+ LF+++ GV P+
Sbjct: 252 ISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQ 311
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
+T+ L A + + G+++H ++I++ + +A V +SL+DMY++ G L + +F
Sbjct: 312 FTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRI 371
Query: 163 TPDR-DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
D+ D V WN MIS + +A+ M ++ + +PN T+V L AC+
Sbjct: 372 CDDKHDCVFWNTMISALAQHGLGHKALRMLDDM-IKFRVQPNRTTLVVILNACS 424
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 96/204 (47%), Gaps = 32/204 (15%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+FD + + + ++N M+ +A+ G+ A+ +++ R G+ + +++ +L A
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 118 VGQGRKVHAFVIKSGLE---------FDAY----------------------VCNSLMDM 146
+ R+ H V+ +G DAY + +L+
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
YA+LG + ++LF E P+++ VSW +I+G VR A++ F++M + KP + T
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKM-IALGVKPEQFT 313
Query: 207 VVSTLTACAALRNAEVGKEIHSYI 230
S L A A++ + GKEIH Y+
Sbjct: 314 FSSCLCASASIASLRHGKEIHGYM 337
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 74/185 (40%), Gaps = 33/185 (17%)
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH------------ 125
A K +A+S + L + G+ +L+ G + QG+ +H
Sbjct: 22 ATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPN 81
Query: 126 --------AFVIKSGLEFDA------------YVCNSLMDMYAELGRLSDFKELFEETPD 165
+K G DA Y N+++ Y + G L + +F+ P+
Sbjct: 82 TLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE 141
Query: 166 RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
RD VSWN M+ G + EA+ F++ R S K NE + LTAC R ++ ++
Sbjct: 142 RDVVSWNTMVIGYAQDGNLHEALWFYKEFR-RSGIKFNEFSFAGLLTACVKSRQLQLNRQ 200
Query: 226 IHSYI 230
H +
Sbjct: 201 AHGQV 205
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 4 TCISLLKSCKSMCELKQ---IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T S+LKSC++M L + ++ G++ N +M + S+ A IF
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV-TMEAACLIFR 171
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I+ + + +I F G + +++Q+ + Y ++A + V
Sbjct: 172 DIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTT 231
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G+++HA VIK G + + V NS++D+Y G LS+ K F E D+D ++WN +IS R
Sbjct: 232 GKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELER 291
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA+ FQR + PN T S + ACA + G+++H I
Sbjct: 292 SDS-SEALLMFQRFESQGF-VPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 5/205 (2%)
Query: 11 SCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNY 70
S S+ KQI A + G Q + +N ++ + G A F ++ L +
Sbjct: 225 SIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYC--RCGYLSEAKHYFHEMEDKDLITW 282
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK 130
N +I + S A+ +FQ+ G P+ YT+ ++ A + + G+++H + +
Sbjct: 283 NTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR 341
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN-VSWNIMISGCVRCKRFQEAIE 189
G + + N+L+DMYA+ G + D + +F E DR N VSW M+ G EA+E
Sbjct: 342 RGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVE 401
Query: 190 FFQRMRMESKEKPNEATVVSTLTAC 214
F +M + S +P+ ++ L+AC
Sbjct: 402 LFDKM-VSSGIRPDRIVFMAVLSAC 425
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 2/177 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
A +FD + + + MI +A RA F ++ + G P+ +T VLK+
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKEL-FEETPDRDNVSWNI 173
+ + G VH V+K G+E YV N++M+MYA + L F + +++V+W
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTT 183
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+I+G ++ +++M +E+ E ++ + A A++ + GK+IH+ +
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIA-VRASASIDSVTTGKQIHASV 239
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ +L+ Y E G + + + LF+E PDRD V+W MI+G A E F M ++
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEM-VKQ 105
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
PNE T+ S L +C ++ G +H +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVV 137
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 5/212 (2%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTD-SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
Q+ LI G + L+ + IGD + ++FD + + ++ ++
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGD---SRKVFDEKVHEQVAVWTALLSGYS 302
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
A+S+F + + + P+ T+ L + LG + G+++H +K GLE DA+
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF 362
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
V NSL+ MY++ G ++D +F + + VSWN +I GC + R + A F +M +
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 199 KEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
KE P+E T L+AC+ E G+++ Y+
Sbjct: 423 KE-PDEITFTGLLSACSHCGFLEKGRKLFYYM 453
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
AL++F + ++ ++ MI + A+ LF+ + + + + V+ A
Sbjct: 178 ALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACAN 237
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
G +VH +IK G ++ YV SL+ YA R+ D +++F+E W +
Sbjct: 238 APAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTAL 297
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+SG K+ ++A+ F M + + PN++T S L +C+AL + GKE+H
Sbjct: 298 LSGYSLNKKHEDALSIFSGM-LRNSILPNQSTFASGLNSCSALGTLDWGKEMH 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 21/182 (11%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
AL +FD + + ++N MI + G A+ LF ++ P+ + GC
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMVNGC 138
Query: 115 L--GDVGQGRKV-HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSW 171
G V Q ++ + +K D NS++ Y + G++ D +LF++ P ++ +SW
Sbjct: 139 FRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISW 193
Query: 172 NIMISGCVRCKRFQEAIEFFQRMR---MESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
MI G + +R EA++ F+ M ++S +P +TACA +G ++H
Sbjct: 194 TTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP----FTCVITACANAPAFHMGIQVHG 249
Query: 229 YI 230
I
Sbjct: 250 LI 251
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
Y RL D LF+E P RD VSWN MISGCV C A++ F M P +
Sbjct: 76 YTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM-------PERSV 128
Query: 207 VVSTLTACAALRNAEV 222
V T R+ +V
Sbjct: 129 VSWTAMVNGCFRSGKV 144
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 97/183 (53%), Gaps = 1/183 (0%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
I+ + G A +FD + + ++ MI +++ G A+ LF Q+ +G +
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
++ L + + G+++H ++K G E +V N+L+ MY + G + + +LF+E
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
+D VSWN MI+G R + A+ FF+ M+ E KP++AT+V+ L+AC+ +
Sbjct: 470 MAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGL-KPDDATMVAVLSACSHTGLVDK 528
Query: 223 GKE 225
G++
Sbjct: 529 GRQ 531
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 94/186 (50%), Gaps = 12/186 (6%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS 66
SL ++ ++ + Q + L+ C D D +AIS+ G + ALR+F + + S
Sbjct: 39 SLKRATQTQIQKSQTKPLLKCG----DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWS 94
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
+YN MI + + G F A LF ++ E D ++ ++K ++G+ R++
Sbjct: 95 SVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFE 150
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
+ E D N+++ YA+ G + D + +F+ P++++VSWN ++S V+ + +E
Sbjct: 151 IMP----ERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEE 206
Query: 187 AIEFFQ 192
A F+
Sbjct: 207 ACMLFK 212
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 90/202 (44%), Gaps = 19/202 (9%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
RD ++ I+ + G A ++FD +F + M+ + + A LF ++
Sbjct: 248 RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM 307
Query: 94 --REDGVWPD---NYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA 148
R + W Y ++ L DV R V + N+++ YA
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTW-------------NTMITGYA 354
Query: 149 ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
+ G++S+ K LF++ P RD VSW MI+G + EA+ F +M E + N ++
Sbjct: 355 QCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFS 413
Query: 209 STLTACAALRNAEVGKEIHSYI 230
S L+ CA + E+GK++H +
Sbjct: 414 SALSTCADVVALELGKQLHGRL 435
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 30 LQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISL 89
+ +RD + +S + G A +FD + + + ++N ++ A+ + A L
Sbjct: 151 IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCL--GDVGQGRKVHAFVIKSGLEF-DAYVCNSLMDM 146
F+ RE+ + L + CL G V + + V A + D N+++
Sbjct: 211 FKS-REN----------WALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITG 259
Query: 147 YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
YA+ G++ + ++LF+E+P +D +W M+SG ++ + +EA E F +M + NE +
Sbjct: 260 YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM-----PERNEVS 314
Query: 207 VVSTLTACAALRNAEVGKEI 226
+ L E+ KE+
Sbjct: 315 WNAMLAGYVQGERMEMAKEL 334
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 12/221 (5%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
+S+ C S L +F L++D + +M + G F + + +
Sbjct: 191 VSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKN--GYFDLGEELLEGMDDN 248
Query: 66 -SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
L YN MI + +G ++ A+ + +++ G+ D +TYP V++A G + G++V
Sbjct: 249 MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
HA+V++ +F + NSL+ +Y + G+ + + +FE+ P +D VSWN ++SG V
Sbjct: 309 HAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHI 367
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
EA F+ M+ E ++S + + L G+E
Sbjct: 368 GEAKLIFKEMK--------EKNILSWMIMISGLAENGFGEE 400
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 107/212 (50%), Gaps = 7/212 (3%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+ +SL C E + I F +D + N L++ S G A IF ++
Sbjct: 325 SLVSLYYKCGKFDEARAI----FEKMPAKDLVSWNALLSGYVSS--GHIGEAKLIFKEMK 378
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ ++ ++ +MI A+ G + LF ++ +G P +Y + +K+ LG G++
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
HA ++K G + N+L+ MYA+ G + + +++F P D+VSWN +I+ +
Sbjct: 439 YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
EA++ ++ M ++ +P+ T+++ LTAC+
Sbjct: 499 GAEAVDVYEEM-LKKGIRPDRITLLTVLTACS 529
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 75/296 (25%)
Query: 5 CISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
C+ L ++ S+ + + I G Q LN+L+ + SS + +YA ++FD I +
Sbjct: 22 CLPLRRT--SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSS--ELNYARQLFDEISE 77
Query: 65 P----------------------SLFN-----------YNVMIKAFAKKGSFRRAISLFQ 91
P +F YN MI F+ AI+LF
Sbjct: 78 PDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFC 137
Query: 92 QLREDGVWPDNYTYPYVLKAIGCLG-DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAEL 150
+++ +G PDN+T+ VL + + D Q + HA +KSG + V N+L+ +Y++
Sbjct: 138 KMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKC 197
Query: 151 GR----LSDFKELFEETPDRDNVSW--------------------------------NIM 174
L +++F+E ++D SW N M
Sbjct: 198 ASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAM 257
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
ISG V +QEA+E +RM + S + +E T S + ACA ++GK++H+Y+
Sbjct: 258 ISGYVNRGFYQEALEMVRRM-VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYV 312
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 104/216 (48%), Gaps = 9/216 (4%)
Query: 6 ISLLKSC-----KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
+S++ +C K + E I + + G + N L+ G A +IFD
Sbjct: 187 VSVISACSRVPAKGLTE--SIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN-YTYPYVLKAIGCLGDVG 119
I +YN ++ +A+ G A +F++L ++ V N T VL A+ G +
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR 304
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
G+ +H VI+ GLE D V S++DMY + GR+ ++ F+ +++ SW MI+G
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+A+E F M ++S +PN T VS L AC+
Sbjct: 365 MHGHAAKALELFPAM-IDSGVRPNYITFVSVLAACS 399
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
++ + +F++N +I A+ G A+ F +R+ ++P ++P +KA L D+
Sbjct: 35 YVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFS 94
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G++ H G + D +V ++L+ MY+ G+L D +++F+E P R+ VSW MI G
Sbjct: 95 GKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDL 154
Query: 181 CKRFQEAIEFFQRMRMESKEKP-----NEATVVSTLTACAALRNAEVGKEIHSYI 230
+A+ F+ + ++ + + +VS ++AC+ + + + IHS++
Sbjct: 155 NGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 114/233 (48%), Gaps = 13/233 (5%)
Query: 9 LKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
+K+C S+ ++ KQ F G Q D + L+ + S+ G A ++FD I +
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMY--STCGKLEDARKVFDEIPKR 140
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQL------REDGVWPDNYTYPYVLKAIGCLGDVG 119
++ ++ MI+ + G+ A+SLF+ L +D ++ D+ V+ A + G
Sbjct: 141 NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKG 200
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR--LSDFKELFEETPDRDNVSWNIMISG 177
+H+FVIK G + V N+L+D YA+ G ++ +++F++ D+D VS+N ++S
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSV 260
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+ EA E F+R+ N T+ + L A + +GK IH +
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQV 313
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 108/244 (44%), Gaps = 33/244 (13%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI--QQPSLFNYNVMIKA 76
K++ A++ SGL++ + +S G+ A ++FD I + ++ ++ +
Sbjct: 26 KELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSS 85
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFD 136
F++ G ++ LF ++R V D+ + + L D+G ++ H +K G+
Sbjct: 86 FSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTS 145
Query: 137 AYVCNSLMDMYAELGRLSDFKELFE-------------------------------ETPD 165
VCN+LMDMY + G +S+ K +FE E P+
Sbjct: 146 VKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPE 205
Query: 166 RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
R+ V+W +M++G + +E +E M N T+ S L+ACA N VG+
Sbjct: 206 RNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRW 265
Query: 226 IHSY 229
+H Y
Sbjct: 266 VHVY 269
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR-EDGVWPDNYTYPYVLKAIGCLG 116
+F + + + + VM+ + G R + L ++ G + T +L A G
Sbjct: 199 VFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG 258
Query: 117 DVGQGRKVHAFVIKSGLEF-------DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
++ GR VH + +K + D V +L+DMYA+ G + +F R+ V
Sbjct: 259 NLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVV 318
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+WN + SG + + I+ F +M E KP++ T + L+AC+
Sbjct: 319 TWNALFSGLAMHGKGRMVIDMFPQMIREV--KPDDLTFTAVLSACS 362
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 5/111 (4%)
Query: 121 GRKVHAFVIKSGLE--FDAYVCNSLMDMYAELGRLSDFKELFEETP--DRDNVSWNIMIS 176
G+++HA + SGL+ +Y+ N+L YA G + ++LF+E P ++DNV W ++S
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 177 GCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
R +++ F MR + E ++ +VV CA L + ++ H
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVE-IDDVSVVCLFGVCAKLEDLGFAQQGH 134
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 102/210 (48%), Gaps = 3/210 (1%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFA 78
+QI + GL D L+++ S G A +F + L +N M+ A+A
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMY--SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYA 349
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ A+ LF +R+ V PD++T V+ LG G+ VHA + K ++ +
Sbjct: 350 ENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTST 409
Query: 139 VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
+ ++L+ +Y++ G D +F+ ++D V+W +ISG + +F+EA++ F M+ +
Sbjct: 410 IESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDD 469
Query: 199 KE-KPNEATVVSTLTACAALRNAEVGKEIH 227
KP+ + S ACA L G ++H
Sbjct: 470 DSLKPDSDIMTSVTNACAGLEALRFGLQVH 499
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 92/176 (52%), Gaps = 1/176 (0%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGC 114
AL++F + ++ +N MI +++ +I LF + G++PD+ + VL AI
Sbjct: 530 ALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISS 589
Query: 115 LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIM 174
+ +G+ +H + ++ G+ D ++ N+L+DMY + G + +F++ + ++WN+M
Sbjct: 590 TASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLM 649
Query: 175 ISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
I G A+ F M+ ++ E P++ T +S ++AC E GK I ++
Sbjct: 650 IYGYGSHGDCITALSLFDEMK-KAGESPDDVTFLSLISACNHSGFVEEGKNIFEFM 704
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 99/213 (46%), Gaps = 4/213 (1%)
Query: 17 ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPS-LFNYNVMIK 75
E KQI + + L D D+ K I G A R+F I+ S + +NVMI
Sbjct: 188 EGKQIHGFMLRNSL--DTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 76 AFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEF 135
F G ++ L+ + + V + ++ L A + G GR++H V+K GL
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 136 DAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
D YVC SL+ MY++ G + + + +F D+ WN M++ A++ F MR
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMR 365
Query: 196 MESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+S P+ T+ + ++ C+ L GK +H+
Sbjct: 366 QKSV-LPDSFTLSNVISCCSVLGLYNYGKSVHA 397
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 17/173 (9%)
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDG---VWPDNYTYPYVLKAIGCLGDVGQGRKVHAF 127
N I+A +KG + +A+ L+ + DG W +T+P +LKA L ++ G+ +H
Sbjct: 28 NSGIRALIQKGEYLQALHLYS--KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 128 VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFE-------ETPDRDNVSWNIMISGCVR 180
V+ G +D ++ SL++MY + G L ++F+ RD WN MI G +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 181 CKRFQEAIEFFQRMRMESKEKPNE---ATVVSTLTACAALRNAEVGKEIHSYI 230
+RF+E + F+RM + +P+ + VVS + R E GK+IH ++
Sbjct: 146 FRRFKEGVGCFRRM-LVFGVRPDAFSLSIVVSVMCKEGNFRREE-GKQIHGFM 196
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 87/177 (49%), Gaps = 3/177 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLRED--GVWPDNYTYPYVLKAI 112
A +F +++ + + +I K G F+ A+ +F +++D + PD+ V A
Sbjct: 427 AYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Query: 113 GCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWN 172
L + G +VH +IK+GL + +V +SL+D+Y++ G ++F + V+WN
Sbjct: 487 AGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWN 546
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
MIS R + +I+ F M + P+ ++ S L A ++ + GK +H Y
Sbjct: 547 SMISCYSRNNLPELSIDLFNLM-LSQGIFPDSVSITSVLVAISSTASLLKGKSLHGY 602
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 4/213 (1%)
Query: 9 LKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLF 68
+ S S+ + K + G+ D N L+ + G YA IF +Q SL
Sbjct: 587 ISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYV--KCGFSKYAENIFKKMQHKSLI 644
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFV 128
+N+MI + G A+SLF ++++ G PD+ T+ ++ A G V +G+ + F+
Sbjct: 645 TWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFM 704
Query: 129 IKS-GLEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIMISGCVRCKRFQE 186
+ G+E + +++D+ G L + + P + D+ W ++S +
Sbjct: 705 KQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVEL 764
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
I +++ E+ + + L A L+N
Sbjct: 765 GILSAEKLLRMEPERGSTYVQLINLYMEAGLKN 797
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 7/228 (3%)
Query: 4 TCISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHY-ALRIF 59
T S+L + S+ L +Q + +G Q+ + L+ + D Y + ++F
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSF-RRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDV 118
I P L +N MI ++ A+ F+Q++ G PD+ ++ V A L
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 119 GQGRKVHAFVIKSGLEFDAY-VCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
Q +++H IKS + + V N+L+ +Y + G L D + +F+ P+ + VS+N MI G
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
+ EA+ +QRM ++S PN+ T V+ L+ACA + G+E
Sbjct: 422 YAQHGHGTEALLLYQRM-LDSGIAPNKITFVAVLSACAHCGKVDEGQE 468
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 91/163 (55%), Gaps = 5/163 (3%)
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFV 128
++N MI A+ + +A++L++++ G D +T VL A+ L + GR+ H +
Sbjct: 207 SWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKL 266
Query: 129 IKSGLEFDAYVCNSLMDMYAELG---RLSDFKELFEETPDRDNVSWNIMISGCVRCKRF- 184
IK+G +++V + L+D Y++ G + D +++F+E D V WN MISG +
Sbjct: 267 IKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELS 326
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+EA++ F++M+ +P++ + V +AC+ L + K+IH
Sbjct: 327 EEAVKSFRQMQ-RIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 92/187 (49%), Gaps = 7/187 (3%)
Query: 42 AISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPD 101
A + DS I H A ++FD I QP +YN +I +A A+ LF+++R+ G D
Sbjct: 83 AYAKDSKI---HIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 102 NYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFE 161
+T ++ A C V +++H F + G + + V N+ + Y++ G L + +F
Sbjct: 140 GFTLSGLIAA--CCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 162 ETPD-RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA 220
+ RD VSWN MI + K +A+ ++ M + K + T+ S L A +L +
Sbjct: 198 GMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKG-FKIDMFTLASVLNALTSLDHL 256
Query: 221 EVGKEIH 227
G++ H
Sbjct: 257 IGGRQFH 263
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 11 SCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNY 70
S S C KQI L S + +R ++N + IS G+ A +FD + + + ++
Sbjct: 359 SSPSQC--KQIHGLAIKSHIPSNRISVNNAL-ISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV-----H 125
N MIK +A+ G A+ L+Q++ + G+ P+ T+ VL A G V +G++
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR-DNVSWNIMISGCVRCK 182
F I+ E + Y C ++D+ G+L + + + P + +V+W ++ C + K
Sbjct: 476 TFKIEP--EAEHYSC--MIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHK 529
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 7/224 (3%)
Query: 11 SCKSMCELKQIQALIFCS-GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFN 69
S KS+ +I +LI + L+ + L+KL+ + + D A +IFD + SL
Sbjct: 143 SAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDL--ARKIFDDVTDSSLLT 200
Query: 70 YNV---MIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
V M +++ GS R A+ ++ + + P N++ LKA L D+ GR +HA
Sbjct: 201 EKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHA 260
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
++K + D V N L+ +Y E G D +++F+ +R+ V+WN +IS + R E
Sbjct: 261 QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHE 320
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
F++M+ E + AT+ + L AC+ + GKEIH+ I
Sbjct: 321 MFNLFRKMQ-EEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 363
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%), Gaps = 6/218 (2%)
Query: 9 LKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP 65
LK+C + +L+ I A I + D+ N L+ + +S G F A ++FD + +
Sbjct: 243 LKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMES--GLFDDARKVFDGMSER 300
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
++ +N +I +KK +LF++++E+ + T +L A + + G+++H
Sbjct: 301 NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIH 360
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
A ++KS + D + NSLMDMY + G + + +F+ +D SWNIM++ +
Sbjct: 361 AQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIE 420
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
E I F+ M +ES P+ T V+ L+ C+ E G
Sbjct: 421 EVINLFEWM-IESGVAPDGITFVALLSGCSDTGLTEYG 457
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 35/196 (17%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
YN +I+++ G ++ +++LF + V P+N T+P ++KA V G +H +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIE 189
K G +D +V S + Y E+G L +++F++ + V+ N ++ C R A E
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 190 FFQRM-----------------------------RMESKEK----PNEATVVSTLTACAA 216
+FQRM M E+ PNEAT VS L++CA
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 217 LRNAEV--GKEIHSYI 230
+ GK+IH Y+
Sbjct: 234 FDQGGIRLGKQIHGYV 249
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 96/186 (51%), Gaps = 6/186 (3%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG---VWPDNYTYP 106
G+ YA F + + ++ +I F+KKG +A+ +F ++ ++ + P+ T+
Sbjct: 166 GEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV 225
Query: 107 YVLKAIGCL--GDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
VL + G + G+++H +V+ + + +L+DMY + G L +F++
Sbjct: 226 SVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR 285
Query: 165 DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGK 224
D+ +WN +IS R ++A+E F+ M+ S PN T+++ LTACA + ++G
Sbjct: 286 DKKVCAWNAIISALASNGRPKQALEMFEMMK-SSYVHPNGITLLAILTACARSKLVDLGI 344
Query: 225 EIHSYI 230
++ S I
Sbjct: 345 QLFSSI 350
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 85/174 (48%), Gaps = 1/174 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G A ++FD + + L ++ MI F KKG A+ F++++ GV PD L
Sbjct: 154 GQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAAL 213
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A LG + G VH +V+ + + V NSL+D+Y G + +++F R V
Sbjct: 214 NACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVV 273
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVG 223
SWN +I G E++ +F++M+ E KP+ T LTAC+ + E G
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQ-EKGFKPDAVTFTGALTACSHVGLVEEG 326
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 37/214 (17%)
Query: 53 HYALRIFDHIQQPS--LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
H +I H Q S ++ I + G A F + GV P++ T+ +L
Sbjct: 20 HANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLS 79
Query: 111 AIG--CLGDVGQGRKVHAFVIKSGLE--------------------------FD------ 136
G G G +H + K GL+ FD
Sbjct: 80 GCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKN 139
Query: 137 AYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRM 196
+ N+++D Y G++ + ++F++ P+RD +SW MI+G V+ +EA+ +F+ M++
Sbjct: 140 SVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI 199
Query: 197 ESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
S KP+ +++ L AC L G +H Y+
Sbjct: 200 -SGVKPDYVAIIAALNACTNLGALSFGLWVHRYV 232
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 63/122 (51%), Gaps = 5/122 (4%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G +A ++F ++++ ++ ++N +I FA G+ ++ F++++E G PD T+ L
Sbjct: 255 GCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGAL 314
Query: 110 KAIGCLGDVGQGRKVHAFV---IKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
A +G V +G + + + + Y C L+D+Y+ GRL D +L + P +
Sbjct: 315 TACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGC--LVDLYSRAGRLEDALKLVQSMPMK 372
Query: 167 DN 168
N
Sbjct: 373 PN 374
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 86/160 (53%), Gaps = 3/160 (1%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
+NV ++ A + F +ISL++ + G PD +++P++LK+ L G+++H V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS--WNIMISGCVRCKRFQEA 187
K G E + +V +L+ MY + G ++D +++FEE P +S +N +ISG + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 188 IEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
F+RM+ E+ + T++ + C +G+ +H
Sbjct: 141 AYMFRRMK-ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLH 179
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 109/224 (48%), Gaps = 8/224 (3%)
Query: 8 LLKSCKSM---CELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
+LKSC S+ +Q+ + G + + L L IS G A ++F+ Q
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTAL--ISMYCKCGLVADARKVFEENPQ 116
Query: 65 PSLFN--YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
S + YN +I + A +F++++E GV D+ T ++ + GR
Sbjct: 117 SSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGR 176
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
+H +K GL+ + V NS + MY + G + + LF+E P + ++WN +ISG +
Sbjct: 177 SLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNG 236
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ +E +++M+ S P+ T+VS L++CA L ++G E+
Sbjct: 237 LAYDVLELYEQMK-SSGVCPDPFTLVSVLSSCAHLGAKKIGHEV 279
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAIS 88
GL + LN I+ G R+FD + L +N +I +++ G +
Sbjct: 186 GLDSEVAVLNSF--ITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 89 LFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA 148
L++Q++ GV PD +T VL + LG G +V V +G + +V N+ + MYA
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYA 303
Query: 149 ELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE-AIEFFQRMRMESKEKPNEATV 207
G L+ + +F+ P + VSW MI GC E + F M ++ +P+ A
Sbjct: 304 RCGNLAKARAVFDIMPVKSLVSWTAMI-GCYGMHGMGEIGLMLFDDM-IKRGIRPDGAVF 361
Query: 208 VSTLTACA 215
V L+AC+
Sbjct: 362 VMVLSACS 369
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 15/184 (8%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +S+L SC + K ++ L+ +G + N +IS + G+ A +FD
Sbjct: 259 TLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNA--SISMYARCGNLAKARAVFD 316
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ SL ++ MI + G + LF + + G+ PD + VL A G +
Sbjct: 317 IMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDK 376
Query: 121 GRKV-----HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP-DRDNVSWNIM 174
G ++ + ++ G E Y C L+D+ GRL + E E P + D W +
Sbjct: 377 GLELFRAMKREYKLEPGPEH--YSC--LVDLLGRAGRLDEAMEFIESMPVEPDGAVWGAL 432
Query: 175 ISGC 178
+ C
Sbjct: 433 LGAC 436
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 95/184 (51%), Gaps = 1/184 (0%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
I S GD A F+ + + + +N +I +A G A+ L +R+ GV D
Sbjct: 266 IDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQ 325
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
+T +++ L + ++ HA +I++G E + +L+D Y++ GR+ + +F++
Sbjct: 326 FTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK 385
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEV 222
P ++ +SWN ++ G R +A++ F++M + + PN T ++ L+ACA +E
Sbjct: 386 LPRKNIISWNALMGGYANHGRGTDAVKLFEKM-IAANVAPNHVTFLAVLSACAYSGLSEQ 444
Query: 223 GKEI 226
G EI
Sbjct: 445 GWEI 448
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 118/225 (52%), Gaps = 6/225 (2%)
Query: 7 SLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+L+++C KS+ +K++ + +G + ++ +N+++ + G A R+FD I
Sbjct: 128 ALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKC--GMIIDARRLFDEIP 185
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ +L++Y +I F G++ A LF+ + E+ + +T+ +L+A LG + G++
Sbjct: 186 ERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQ 245
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H +K G+ + +V L+DMY++ G + D + FE P++ V+WN +I+G
Sbjct: 246 LHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGY 305
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+EA+ MR +S ++ T+ + L E+ K+ H+
Sbjct: 306 SEEALCLLYDMR-DSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 10/150 (6%)
Query: 83 FRRAISLFQQLR-----EDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
FR A LF+ L + GV TY +++A L + ++V+ F++ +G E +
Sbjct: 103 FREAFELFEILEIRCSFKVGV----STYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQ 158
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
Y+ N ++ M+ + G + D + LF+E P+R+ S+ +ISG V + EA E F +M E
Sbjct: 159 YMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELF-KMMWE 217
Query: 198 SKEKPNEATVVSTLTACAALRNAEVGKEIH 227
T L A A L + VGK++H
Sbjct: 218 ELSDCETHTFAVMLRASAGLGSIYVGKQLH 247
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 101/201 (50%), Gaps = 4/201 (1%)
Query: 30 LQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISL 89
L++++ L + IST +G A+ +F + P++ +Y +I F++ A+ +
Sbjct: 109 LREEKTRLGNAL-ISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKV 167
Query: 90 FQQLREDG-VWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYA 148
F ++R+ G V P+ YT+ +L A + G ++H ++KSG +V NSLM +Y
Sbjct: 168 FFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYD 227
Query: 149 ELGRLS--DFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
+ S D +LF+E P RD SWN ++S V+ + +A + F M + T
Sbjct: 228 KDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFT 287
Query: 207 VVSTLTACAALRNAEVGKEIH 227
+ + L++C G+E+H
Sbjct: 288 LSTLLSSCTDSSVLLRGRELH 308
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 105/216 (48%), Gaps = 7/216 (3%)
Query: 17 ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKA 76
++K++++L + + QD T ++ I+ S G A+ IF ++ + + YN ++
Sbjct: 335 DMKKVESL-YEMMMAQDAVTFTEM--ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAG 391
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFD 136
F + G +A+ LF + + GV +++ + A G + + ++H F IK G F+
Sbjct: 392 FCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFN 451
Query: 137 AYVCNSLMDMYAELGRLSDFKELFEETP---DRDNVSWNIMISGCVRCKRFQEAIEFFQR 193
+ +L+DM R++D +E+F++ P D + +I I G R +A+ F R
Sbjct: 452 PCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSI-IGGYARNGLPDKAVSLFHR 510
Query: 194 MRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
E K +E ++ L C L E+G +IH Y
Sbjct: 511 TLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCY 546
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%), Gaps = 4/192 (2%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +++L +C + QI LI SG N LM++ S L++FD
Sbjct: 183 TFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFD 242
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVG 119
I Q + ++N ++ + K+G +A LF ++ R +G D++T +L + +
Sbjct: 243 EIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLL 302
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
+GR++H I+ GL + V N+L+ Y++ + + L+E +D V++ MI+ +
Sbjct: 303 RGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYM 362
Query: 180 RCKRFQEAIEFF 191
A+E F
Sbjct: 363 SFGMVDSAVEIF 374
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 73 MIKAFAKKGSFRRAISLFQQ-LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS 131
+I +A+ G +A+SLF + L E ++ D + +L G LG G ++H + +K+
Sbjct: 491 IIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKA 550
Query: 132 GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
G D + NSL+ MYA+ D ++F + D +SWN +IS + + EA+ +
Sbjct: 551 GYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALW 610
Query: 192 QRMRMESKEKPNEATVVSTLTA 213
RM E + KP+ T+ ++A
Sbjct: 611 SRMN-EKEIKPDIITLTLVISA 631
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
Y+L+ DV + VHA +K E + N+L+ Y +LG + +F
Sbjct: 85 YLLRLSAQYHDVEVTKAVHASFLKLREE-KTRLGNALISTYLKLGFPREAILVFVSLSSP 143
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
VS+ +ISG R EA++ F RMR +PNE T V+ LTAC + +G +I
Sbjct: 144 TVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQI 203
Query: 227 HSYI 230
H I
Sbjct: 204 HGLI 207
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 95/184 (51%), Gaps = 3/184 (1%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
+RD + M +S +S+G+ A F+ + ++N +I A+ K ++ A+ LF +
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 93 LREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR 152
+ +G PD +T +L A L ++ G ++H V+K+ + D V N+L+ MY+ G
Sbjct: 400 MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIP-DVPVHNALITMYSRCGE 458
Query: 153 LSDFKELFEETP-DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
+ + + +F+E R+ ++WN MI G EA+ F M+ + P+ T VS L
Sbjct: 459 IMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMK-SNGIYPSHITFVSVL 517
Query: 212 TACA 215
ACA
Sbjct: 518 NACA 521
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 11/166 (6%)
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
++ ++N MIKA+ K G A LF Q+++ D ++ ++ G V R
Sbjct: 280 NVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMID-----GYVHVSRMED 330
Query: 126 AFVIKSGL-EFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRF 184
AF + S + DA+ N ++ YA +G + + FE+TP++ VSWN +I+ + K +
Sbjct: 331 AFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDY 390
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+EA++ F RM +E EKP+ T+ S L+A L N +G ++H +
Sbjct: 391 KEAVDLFIRMNIEG-EKPDPHTLTSLLSASTGLVNLRLGMQMHQIV 435
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLG 116
IF+ ++ + +N MI + K+ +A LF + + D V + YV + G +
Sbjct: 62 IFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYV--SCGGIR 119
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMIS 176
+ + RK+ + D++ N+++ YA+ R+ + LFE+ P+R+ VSW+ MI+
Sbjct: 120 FLEEARKLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMIT 175
Query: 177 GCVRCKRFQEAIEFFQRM 194
G + A+ F++M
Sbjct: 176 GFCQNGEVDSAVVLFRKM 193
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 14/226 (6%)
Query: 1 MKGTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
M C S +++CK E++ ++ LN ++ + S G A R+F+
Sbjct: 362 MYSKCGSPMEACKLFSEVESYDTIL-----------LNSMIKVYF--SCGRIDDAKRVFE 408
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
I+ SL ++N M F++ G + F Q+ + + D + V+ A + +
Sbjct: 409 RIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLEL 468
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G +V A GL+ D V +SL+D+Y + G + + +F+ D V WN MISG
Sbjct: 469 GEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYAT 528
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ EAI+ F++M + + +P + T + LTAC E G+++
Sbjct: 529 NGQGFEAIDLFKKMSV-AGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 106/231 (45%), Gaps = 36/231 (15%)
Query: 30 LQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISL 89
+ +RD + + +S + G+ A R+F+ + + + N ++ + G A+ L
Sbjct: 118 MMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRL 177
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
F++L D T VLKA L + G+++HA ++ G+E D+ + +SL+++YA+
Sbjct: 178 FKELNFSA---DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAK 234
Query: 150 -------------------------------LGRLSDFKELFEETPDRDNVSWNIMISGC 178
GR+++ + LF+ +R + WN MISG
Sbjct: 235 CGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY 294
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
+ EA+ F MR E++E + T+ + + AC L E GK++H +
Sbjct: 295 IANNMKMEALVLFNEMRNETRE--DSRTLAAVINACIGLGFLETGKQMHCH 343
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 69/288 (23%)
Query: 4 TCISLLKSCKSMCELK---QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T ++LK+C + LK QI A I G++ D + L ++ + GD A + +
Sbjct: 189 TLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSL--VNVYAKCGDLRMASYMLE 246
Query: 61 HIQQPSLFNYNVMIKAFAK-------KGSFRR------------------------AISL 89
I++P + + +I +A +G F R A+ L
Sbjct: 247 QIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVL 306
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
F ++R + D+ T V+ A LG + G+++H K GL D V ++L+DMY++
Sbjct: 307 FNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSK 365
Query: 150 -------------------------------LGRLSDFKELFEETPDRDNVSWNIMISGC 178
GR+ D K +FE ++ +SWN M +G
Sbjct: 366 CGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGF 425
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ E +E+F +M + +E ++ S ++ACA++ + E+G+++
Sbjct: 426 SQNGCTVETLEYFHQMH-KLDLPTDEVSLSSVISACASISSLELGEQV 472
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 12/160 (7%)
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK 130
N +++ +++ G A +LF ++ PD + + G + +G + F +
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEM------PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM 119
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEF 190
E D Y N ++ +A+ G LS + LF P++D V+ N ++ G + +EA+
Sbjct: 120 P--ERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRL 177
Query: 191 FQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
F+ + + + T+ + L ACA L + GK+IH+ I
Sbjct: 178 FKELNFSA----DAITLTTVLKACAELEALKCGKQIHAQI 213
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 122 RKVHAFVIKSG-LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
R+ + ++K G L V N L+ MY+ G++ + LF+E PDR+ SWN MI G +
Sbjct: 46 RQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMN 105
Query: 181 CKRFQEAIEFFQRM 194
++ FF M
Sbjct: 106 SGEKGTSLRFFDMM 119
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 100/197 (50%), Gaps = 8/197 (4%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
++T++ +S + G AL +F + +L+++ +I F + G A S+F ++
Sbjct: 169 KNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEM 228
Query: 94 REDGVWPDNYTYPYVLKAI-GCLGDVGQ---GRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
R + V + P VL +I G ++ GR+VH VI G + ++ N+L+DMYA+
Sbjct: 229 RRERV---DILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAK 285
Query: 150 LGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVS 209
+ K++F RD VSW +I G + + ++A+ + M + KPNE T V
Sbjct: 286 CSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDM-VSHGVKPNEVTFVG 344
Query: 210 TLTACAALRNAEVGKEI 226
+ AC+ + E G+E+
Sbjct: 345 LIYACSHVGFVEKGREL 361
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 34/250 (13%)
Query: 13 KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNV 72
+++ K + A I G+ Q N L ++ G +AL++FD + +
Sbjct: 17 RTLTTAKALHAHIVKLGIVQCCPLANTL--VNVYGKCGAASHALQVFDEMPHRDHIAWAS 74
Query: 73 MIKAFAKKG-SFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS 131
++ A + S + G+ PD++ + ++KA LG + GR+VH I S
Sbjct: 75 VLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVS 134
Query: 132 GLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
D V +SL+DMYA+ G L+ K +F+ ++ +SW M+SG + R +EA+E F
Sbjct: 135 EYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF 194
Query: 192 Q-------------------------------RMRMESKEKPNEATVVSTLTACAALRNA 220
+ MR E + + + S + ACA L +
Sbjct: 195 RILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAAS 254
Query: 221 EVGKEIHSYI 230
G+++H +
Sbjct: 255 IAGRQVHGLV 264
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 33/196 (16%)
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWP-DNYTYPYVLKAIGCLGDVGQGRKVH 125
L + + ++A +G+ +A++LF Q+ P D + + LK+ G VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQ 185
A +KS + +V +L+DMY + +S ++LF+E P R+ V WN MIS C + +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 186 EAIEFFQRMRMESKE--------------------------------KPNEATVVSTLTA 213
EA+E ++ M + E KPN T+++ ++A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 214 CAALRNAEVGKEIHSY 229
C+A+ + KEIHSY
Sbjct: 192 CSAIGAFRLIKEIHSY 207
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 105/218 (48%), Gaps = 18/218 (8%)
Query: 1 MKGTCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
M G C+S+ + K E+ Q A+++ + IS + G A+ +++
Sbjct: 92 MYGKCLSVSHARKLFDEIPQRNAVVWNA-------------MISHYTHCGKVKEAVELYE 138
Query: 61 HIQ-QPSLFNYNVMIKAF--AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+ P+ ++N +IK + GS+R AI ++++ E P+ T ++ A +G
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLALVSACSAIGA 197
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISG 177
+++H++ ++ +E + + L++ Y G + + +F+ DRD V+W+ +IS
Sbjct: 198 FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISA 257
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ A++ FQ M + +K P++ ++ L AC+
Sbjct: 258 YALHGDAESALKTFQEMEL-AKVTPDDIAFLNVLKACS 294
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 20/219 (9%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTD-----SSIGDFHYALRIFDHI-QQPSLFNYNV 72
+QI AL+ G N ++ I T SS+GD YA ++FD ++ ++ +
Sbjct: 85 RQIHALVRKLGF-------NAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTA 137
Query: 73 MIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSG 132
MI A+ + + AI LF+++ + + D L A LG V G ++++ IK
Sbjct: 138 MISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRK 197
Query: 133 --LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEF 190
L D + NSL++MY + G ++LF+E+ +D ++ MI G + QE++E
Sbjct: 198 RRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLEL 257
Query: 191 FQRMRMESKEK-----PNEATVVSTLTACAALRNAEVGK 224
F++M+ + + PN+ T + L AC+ E GK
Sbjct: 258 FKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK 296
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQ-QLREDGVWPDNYTYPYVLKAIGCLGDVG 119
H SL N +K + + G +A+ F+ + R+ + D+++ + +K
Sbjct: 23 HFHTKSL-KSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASS 81
Query: 120 -QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN-VSWNIMISG 177
GR++HA V K G + SL+ Y+ +G + +++F+ETP++ N V W MIS
Sbjct: 82 LDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISA 141
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+ EAIE F+RM E K + + V L+ACA L ++G+EI+S
Sbjct: 142 YTENENSVEAIELFKRMEAE-KIELDGVIVTVALSACADLGAVQMGEEIYS 191
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 2/178 (1%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAI-SLFQQLREDGVWPDNYTYPY 107
IG+ A ++ + ++ +N+MI + + + A+ +L L + P+ +++
Sbjct: 111 IGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFAS 170
Query: 108 VLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRD 167
L A LGD+ + VH+ +I SG+E +A + ++L+D+YA+ G + +E+F D
Sbjct: 171 SLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRND 230
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
WN MI+G EAI F M E P+ T + LT C+ E GKE
Sbjct: 231 VSIWNAMITGFATHGLATEAIRVFSEMEAE-HVSPDSITFLGLLTTCSHCGLLEEGKE 287
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 133 LEFDAYVCNS--LMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEF 190
L VCN +++ ++G K++ D++ ++WN+MI G VR +++EA++
Sbjct: 92 LSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKA 151
Query: 191 FQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHS 228
+ M + KPN+ + S+L ACA L + K +HS
Sbjct: 152 LKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHS 189
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 5/177 (2%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
G + AL +FD + + + ++N MI G I +F ++ + P +T+ +
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLE-FDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
+ C V G ++H I SG+ ++ V NS+MDMY LG +F DRD
Sbjct: 144 SLVTC---VRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDV 200
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
VSWN +I C + A++ F MR E + +P+E TV ++ C+ LR GK+
Sbjct: 201 VSWNCLILSCSDSGNKEVALDQFWLMR-EMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 2/204 (0%)
Query: 12 CKSMCEL-KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNY 70
C + EL K QAL C + +++ I S ++++F +++
Sbjct: 245 CSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC 304
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK 130
N MI +++ A+ LF V PD +T+ VL ++ + + G VH+ VIK
Sbjct: 305 NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIK 363
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEF 190
G + D V SLM+MY + G + +F +T +D + WN +I G R R E++
Sbjct: 364 LGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAI 423
Query: 191 FQRMRMESKEKPNEATVVSTLTAC 214
F ++ M KP+ T++ L AC
Sbjct: 424 FNQLLMNQSLKPDRVTLMGILVAC 447
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 105/213 (49%), Gaps = 5/213 (2%)
Query: 19 KQIQALIFCSGLQQ-DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAF 77
+QI CSG+ + + N +M + +G F YAL +F ++ + ++N +I +
Sbjct: 153 EQIHGNAICSGVSRYNLVVWNSVMDMY--RRLGVFDYALSVFLTMEDRDVVSWNCLILSC 210
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
+ G+ A+ F +RE + PD YT V+ L ++ +G++ A IK G ++
Sbjct: 211 SDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNS 270
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
V + +DM+++ RL D +LF E D+V N MI ++A+ F + M
Sbjct: 271 IVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFI-LAMT 329
Query: 198 SKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
+P++ T S L++ A+ + G ++HS +
Sbjct: 330 QSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLV 361
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 151 GRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIE-FFQRMRMESKEKPNEATVVS 209
G L++ +LF+E P+RD VSWN MISG V C + I FF R E + ++++
Sbjct: 84 GYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILA 143
Query: 210 TLTACAALRNAEVGKEIH 227
+L C G++IH
Sbjct: 144 SLVTC-----VRHGEQIH 156
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
+ VHA ++++G Y N + +Y + G + + +LF++ PD++ ++WN+ + G +
Sbjct: 23 AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFK 82
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
A++ F M ++ + T++S L +C
Sbjct: 83 NGYLNNALDLFD--EMPERDVVSWNTMISGLVSCG 115
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 85/166 (51%), Gaps = 1/166 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GD A ++FD + ++ ++N+MI A+ + +ISLF+++ G + T +L
Sbjct: 198 GDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLL 257
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A G + +GR VHA +I++ L + +L+DMY + + + +F+ R+ V
Sbjct: 258 NACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKV 317
Query: 170 SWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+WN+MI R + +E F+ M + +P+E T V L CA
Sbjct: 318 TWNVMILAHCLHGRPEGGLELFEAM-INGMLRPDEVTFVGVLCGCA 362
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
L++ S+ L Q+ A + SG D +L+ + S GD Y + I+ I + L
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLL--KSSSRFGDSSYTVSIYRSIGK--L 83
Query: 68 FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAF 127
+ N + KA+ S ++A+ + + G PD+YT+ ++ I V G+ H
Sbjct: 84 YCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQ 143
Query: 128 VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRC------ 181
IK G + V NSLM MY G L K+LF E P RD VSWN +I+G VR
Sbjct: 144 AIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAA 203
Query: 182 -KRFQE------------------------AIEFFQRMRMESKEKPNEATVVSTLTACAA 216
K F E +I F+ M + + + NE+T+V L AC
Sbjct: 204 HKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREM-VRAGFQGNESTLVLLLNACGR 262
Query: 217 LRNAEVGKEIHS 228
+ G+ +H+
Sbjct: 263 SARLKEGRSVHA 274
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 5/187 (2%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQ 92
+R+ + + I+ +++GDF AL + + ++ ++ +I +A+ + AI LF +
Sbjct: 186 ERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSR 245
Query: 93 LRE-DGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSG-LEFDAYVCNSLMDMYAEL 150
+ D + P+ T +L A+ LGD+ VHA+V K G + D V NSL+D YA+
Sbjct: 246 MVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKC 305
Query: 151 GRLSDFKELFEETPD--RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVV 208
G + + F E P+ ++ VSW MIS +EA+ F+ M KPN T++
Sbjct: 306 GCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDME-RLGLKPNRVTMI 364
Query: 209 STLTACA 215
S L AC+
Sbjct: 365 SVLNACS 371
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 118/271 (43%), Gaps = 54/271 (19%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
+C S L S ++ ++ Q+L +Q+ L + + + + F + H +
Sbjct: 22 SCYSTLVSDGNIFSIQHFQSL-----MQKYESNLKIIHQLHSHFTTSGF-----LLLHQK 71
Query: 64 QPS--LFNYNVMIKAFAKKGSFRRAISLFQQLR-------EDGVWP--DNYTYPYVLKAI 112
Q S LF +N +++ ++ + A L+ QL+ + P D++TY ++LKA
Sbjct: 72 QNSGKLFLFNPLLRCYSLGETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKAS 131
Query: 113 GC--LGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS 170
+ G +H +K G E YV +L+ MY G + D ++F+E P+R+ V+
Sbjct: 132 SNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVT 191
Query: 171 WNIMISGCV-------------------------------RCKRFQEAIEFFQRMRMESK 199
WN+MI+G R + +EAI F RM
Sbjct: 192 WNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDA 251
Query: 200 EKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
KPNE T+++ L A L + ++ +H+Y+
Sbjct: 252 IKPNEITILAILPAVWNLGDLKMCGSVHAYV 282
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 106/225 (47%), Gaps = 6/225 (2%)
Query: 4 TCISLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFD 60
T +S++ +C S E + I L+ G+ ++ +N I+ GD + ++F+
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAF--INWYGKTGDLTSSCKLFE 193
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ +L ++N MI + G + ++ F R G PD T+ VL++ +G V
Sbjct: 194 DLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRL 253
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
+ +H ++ G + + +L+D+Y++LGRL D +F E D+++W M++
Sbjct: 254 AQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYAT 313
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
++AI+ F+ M + P+ T L AC+ E GK
Sbjct: 314 HGFGRDAIKHFELM-VHYGISPDHVTFTHLLNACSHSGLVEEGKH 357
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Query: 55 ALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL--REDGVWPDNYTYPYVLKAI 112
A ++FD + + L ++N +I ++ +G + + ++ E G P+ T+ ++ A
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 113 GCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWN 172
G +GR +H V+K G+ + V N+ ++ Y + G L+ +LFE+ ++ VSWN
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 173 IMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
MI ++ ++ + +F R E P++AT ++ L +C + + + IH I
Sbjct: 205 TMIVIHLQNGLAEKGLAYFNMSRRVGHE-PDQATFLAVLRSCEDMGVVRLAQGIHGLI 261
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 110/225 (48%), Gaps = 5/225 (2%)
Query: 5 CISLLKSCKSMCELK--QIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI 62
C LL S ++ +K Q+ + SGL N L+ + S + + R F+
Sbjct: 19 CDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLP--FDSRRAFEDS 76
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
Q S ++ +I FA+ ++ +++ + PD++ P K+ L GR
Sbjct: 77 PQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGR 136
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
VH +K+G + D +V +SL+DMYA+ G + +++F+E P R+ V+W+ M+ G +
Sbjct: 137 SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
+EA+ F+ E+ N+ + S ++ CA E+G++IH
Sbjct: 197 ENEEALWLFKEALFENL-AVNDYSFSSVISVCANSTLLELGRQIH 240
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 107/212 (50%), Gaps = 6/212 (2%)
Query: 7 SLLKSCK--SMCEL-KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S KSC S C++ + + L +G D D + + G+ YA ++FD +
Sbjct: 121 SATKSCAILSRCDIGRSVHCLSMKTGY--DADVFVGSSLVDMYAKCGEIVYARKMFDEMP 178
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
Q ++ ++ M+ +A+ G A+ LF++ + + ++Y++ V+ + GR+
Sbjct: 179 QRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQ 238
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
+H IKS + ++V +SL+ +Y++ G ++F E P ++ WN M+ +
Sbjct: 239 IHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSH 298
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
Q+ IE F+RM++ S KPN T ++ L AC+
Sbjct: 299 TQKVIELFKRMKL-SGMKPNFITFLNVLNACS 329
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 43 ISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDN 102
+S S G A ++F+ + +L +N M+KA+A+ ++ I LF++++ G+ P+
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
T+ VL A G V +GR + +S +E SL+DM GRL + E+
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITN 378
Query: 163 TP-DRDNVSWNIMISGCV 179
P D W +++ C
Sbjct: 379 MPIDPTESVWGALLTSCT 396
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 10/186 (5%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAK---KGSF--RRAISLFQQLR--EDGVWPDN 102
GD YA ++FD + + + +N MI + KG+ R+A+ LF++ GV P +
Sbjct: 161 GDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTD 220
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL--EFDAYVCNSLMDMYAELGRLSDFKELF 160
T VL AI G + G VH ++ K G E D ++ +L+DMY++ G L++ +F
Sbjct: 221 TTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVF 280
Query: 161 EETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA 220
E ++ +W M +G R E RM ES KPNE T S L+A +
Sbjct: 281 ELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM-AESGIKPNEITFTSLLSAYRHIGLV 339
Query: 221 EVGKEI 226
E G E+
Sbjct: 340 EEGIEL 345
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 113/241 (46%), Gaps = 21/241 (8%)
Query: 6 ISLLK-SCKSMCELKQIQALIFCSGLQQDRDTLNKLMA-----ISTDSSIGDFHYALRIF 59
+SLL+ + K++ + KQI A + +G D KL+ ST+SS H L +F
Sbjct: 11 LSLLQQNSKTLIQAKQIHAQLVINGCH-DNSLFGKLIGHYCSKPSTESSSKLAH--LLVF 67
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
P F +N ++K + S R I + ++ + T+ +VL A
Sbjct: 68 PRFGHPDKFLFNTLLKCSKPEDSIR--IFANYASKSSLLYLNERTFVFVLGACARSASSS 125
Query: 120 Q---GRKVHAFVIKSGLEFDA-YVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMI 175
GR VH V K G +++ + +L+ YA+ G L +++F+E P+R +V+WN MI
Sbjct: 126 ALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMI 185
Query: 176 SGCVRCK-----RFQEAIEFFQRMR-MESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
G K ++A+ F+R S +P + T+V L+A + E+G +H Y
Sbjct: 186 GGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGY 245
Query: 230 I 230
I
Sbjct: 246 I 246
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 5/212 (2%)
Query: 4 TCISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
T SLL +C+ + + KQI A++F Q D L+ + S+ A F+ +
Sbjct: 247 TFSSLLSACR-IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSN--HLSDARECFESMV 303
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
++ ++N MI FA+ G R A+ LF Q+ + + PD T+ VL + + + ++
Sbjct: 304 VRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ 363
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKR 183
V A V K G V NSL+ Y+ G LS+ F + D VSW +I
Sbjct: 364 VQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGF 423
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+E+++ F+ M K +P++ T + L+AC+
Sbjct: 424 AEESLQMFESML--QKLQPDKITFLEVLSACS 453
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 12/229 (5%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL 67
L S + ++KQ + G+ NKL+ T I +F A ++FD + ++
Sbjct: 45 LSASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYT--KIREFDDADKLFDEMPLRNI 102
Query: 68 FNYNVMIKAFAKKG--SFRRAISLFQQLRE---DGVWPDNYTYPYVLKAIGCLGDVGQGR 122
+N++I ++ + RA F L V D+ ++ +++ ++ G
Sbjct: 103 VTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGI 162
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
++H ++K GLE + SL+ Y + G + + + +FE DRD V WN ++S V
Sbjct: 163 QLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG 222
Query: 183 RFQEAIEFFQRMRME-SKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
EA + M + ++ + + T S L+AC E GK+IH+ +
Sbjct: 223 MIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAIL 267
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
D +L +N MI + + + LF+ + E+G+ P++ L L +
Sbjct: 242 DMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQ 301
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
GR++H V KS L D SL+ MY + G L D +LFE +D V+WN MISG
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYA 361
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
+ +A+ F+ M +++K +P+ T V+ L AC
Sbjct: 362 QHGNADKALCLFREM-IDNKIRPDWITFVAVLLAC 395
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 96/222 (43%), Gaps = 41/222 (18%)
Query: 40 LMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVW 99
L+ IS D S A ++FD I +P F+YN+M+ + + +F +A S F ++ +
Sbjct: 99 LIGISKDPS--RMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM----PF 152
Query: 100 PDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKEL 159
D ++ ++ G++ + R++ S +E + N+++ Y E G L
Sbjct: 153 KDAASWNTMITGYARRGEMEKAREL----FYSMMEKNEVSWNAMISGYIECGDLEKASHF 208
Query: 160 FEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ--------------------------- 192
F+ P R V+W MI+G ++ K+ + A F+
Sbjct: 209 FKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDG 268
Query: 193 ----RMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
R +E +PN + + S L C+ L ++G++IH +
Sbjct: 269 LKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 37 LNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGS-FRRAISLFQQLRE 95
LNK++A S GD ALR+F ++ + +N ++ +K S A LF ++ E
Sbjct: 64 LNKIIARCVRS--GDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPE 121
Query: 96 DGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD 155
PD ++Y +L C K +F + + DA N+++ YA G +
Sbjct: 122 ----PDTFSYNIML---SCYVRNVNFEKAQSFFDRMPFK-DAASWNTMITGYARRGEMEK 173
Query: 156 FKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
+ELF +++ VSWN MISG + C ++A FF+
Sbjct: 174 ARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFK 210
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 10/190 (5%)
Query: 7 SLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S L C + L +QI ++ S L D L L IS G+ A ++F+ ++
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSL--ISMYCKCGELGDAWKLFEVMK 346
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ + +N MI +A+ G+ +A+ LF+++ ++ + PD T+ VL A G V G
Sbjct: 347 KKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMA 406
Query: 124 VHAFVI---KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
++ K + D Y C ++D+ G+L + +L P R + + + G R
Sbjct: 407 YFESMVRDYKVEPQPDHYTC--MVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACR 464
Query: 181 CKRFQEAIEF 190
+ E EF
Sbjct: 465 VHKNVELAEF 474
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 98/213 (46%), Gaps = 41/213 (19%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYV 108
G AL +FD + + ++ ++N M+KA ++G A++LF+++ R D V ++ +
Sbjct: 154 GRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV-----SWTAM 208
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
+ + G V + R++ + E + N+++ YA+ R+ + +LF+ P+RD
Sbjct: 209 VDGLAKNGKVDEARRLFDCMP----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDF 264
Query: 169 VSWNIM-------------------------------ISGCVRCKRFQEAIEFFQRMRME 197
SWN M I+G V K +EA+ F +M +
Sbjct: 265 ASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRD 324
Query: 198 SKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
KPN T VS L+AC+ L G++IH I
Sbjct: 325 GSVKPNVGTYVSILSACSDLAGLVEGQQIHQLI 357
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG-VWPDNYTYPYVL 109
+ + A +FD + + ++ ++ MI + + A+++F ++ DG V P+ TY +L
Sbjct: 279 EMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE--TPDRD 167
A L + +G+++H + KS + + V ++L++MY++ G L +++F+ RD
Sbjct: 339 SACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRD 398
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
+SWN MI+ +EAIE + +MR KP+ T ++ L AC+ E G E
Sbjct: 399 LISWNSMIAVYAHHGHGKEAIEMYNQMRKHGF-KPSAVTYLNLLFACSHAGLVEKGME 455
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 7/146 (4%)
Query: 49 IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYV 108
+G A ++FD + + + + +I + K G R A LF D V +
Sbjct: 59 VGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELF-----DRVDSRKNVVTWT 113
Query: 109 LKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDN 168
G L + + + + E + N+++D YA+ GR+ ELF+E P+R+
Sbjct: 114 AMVSGYLR--SKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI 171
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRM 194
VSWN M+ V+ R EA+ F+RM
Sbjct: 172 VSWNSMVKALVQRGRIDEAMNLFERM 197
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 77/179 (43%), Gaps = 11/179 (6%)
Query: 15 MCELKQI-QALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHI-QQPSLFNYNV 72
+C++ +I +A GL + RD + I+ +GD A +FD + + ++ +
Sbjct: 56 LCKVGKIAEARKLFDGLPE-RDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTA 114
Query: 73 MIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSG 132
M+ + + A LFQ++ E V ++ ++ G + + ++
Sbjct: 115 MVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKALEL----FDEM 166
Query: 133 LEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
E + NS++ + GR+ + LFE P RD VSW M+ G + + EA F
Sbjct: 167 PERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLF 225
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 87/182 (47%), Gaps = 3/182 (1%)
Query: 34 RDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQL 93
++ ++ + IS + +GD A +F + + Y+ MI + + G + A+ LF Q+
Sbjct: 261 KNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM 320
Query: 94 --REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELG 151
R + PD T V+ A LG+ G V +++ + G++ D + SL+D+Y + G
Sbjct: 321 LERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGG 380
Query: 152 RLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
+ ++F +D VS++ MI GC EA F M +E K PN T L
Sbjct: 381 DFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM-IEKKIPPNVVTFTGLL 439
Query: 212 TA 213
+A
Sbjct: 440 SA 441
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 89/188 (47%), Gaps = 1/188 (0%)
Query: 8 LLKSCKSMCELKQIQALIFCSGLQQDRDTL-NKLMAISTDSSIGDFHYALRIFDHIQQPS 66
L+ C + + KQ+ A + + L ++ + + + S Y RI
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHD 68
Query: 67 LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHA 126
F++ +++ ++ F+ + ++ + G+ P ++ VL+A G + ++ G+ +HA
Sbjct: 69 SFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 127 FVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQE 186
+K+GL YV L+ +Y+ LG + K+ F++ +++ VSWN ++ G + E
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDE 188
Query: 187 AIEFFQRM 194
A F ++
Sbjct: 189 ARRVFDKI 196
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 7 SLLKSC---KSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ 63
S+L++C ++M + K I A +GL L+ + S +G A + FD I
Sbjct: 109 SVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLY--SRLGYIELAKKAFDDIA 166
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ + ++N ++ + + G A +F ++ E D ++ ++ + GD+G
Sbjct: 167 EKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACS 222
Query: 124 V-HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
+ A +KS + N L+ Y + + F+ P ++ VSW MISG +
Sbjct: 223 LFSAMPLKSPASW-----NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLG 277
Query: 183 RFQEAIEFFQRMRMESKE--------------------------------KPNEATVVST 210
Q A E F+ M + K +P+E T+ S
Sbjct: 278 DVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSV 337
Query: 211 LTACAALRNAEVGKEIHSYI 230
++A + L N G + SYI
Sbjct: 338 VSANSQLGNTSFGTWVESYI 357
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 50 GDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVL 109
GDF A ++F ++ + +Y+ MI G A SLF + E + P+ T+ +L
Sbjct: 380 GDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLL 439
Query: 110 KAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV 169
A G V +G K + LE A ++DM GRL + EL + P + N
Sbjct: 440 SAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNA 499
Query: 170 S-WNIMI 175
W ++
Sbjct: 500 GVWGALL 506
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 6/153 (3%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P + Y ++A+ K+G FRR + +++RE+G P+ TY V+ ++G V + V
Sbjct: 306 PDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGV 365
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD----RDNVSWNIMISGCVR 180
+ + + G DA +SL+ + ++ GR D E+FE+ + RD + +N MIS +
Sbjct: 366 YEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALH 425
Query: 181 CKRFQEAIEFFQRMRMESKE--KPNEATVVSTL 211
R + A+ +RM E E PN T L
Sbjct: 426 HSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 35 DTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAISLF 90
DT+ IS+ +G A+R+FD ++ QP+ Y ++ + K G +A+ LF
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 91 QQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAEL 150
++++ G P YTY ++K +G G V + + +++ GL D N+LM++ ++
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKV 351
Query: 151 GRLSDFKELFEE------TPDRDNVSWNIMISGCVRCK-RFQEAIEFFQRMRMESKEKPN 203
GR+ + +F E TP VS+N +I K E +F +M+ +S P+
Sbjct: 352 GRVEELTNVFSEMGMWRCTPTV--VSYNTVIKALFESKAHVSEVSSWFDKMKADSV-SPS 408
Query: 204 EAT 206
E T
Sbjct: 409 EFT 411
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
Y VMIK F K G A+ LF +++ G PD Y Y ++ + G + + + +
Sbjct: 482 YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKME 541
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQ 185
++G D N +++ +A G E+FE D V++N ++ F+
Sbjct: 542 ENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFE 601
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKE 225
EA RM E K+K E ++ + A+ N + K+
Sbjct: 602 EA----ARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG---QGRKVH 125
++N+++ FA+ G RRAI +F+ ++ G+ PD TY +L GC G + ++
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLL---GCFAHAGMFEEAARMM 607
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSD 155
+ G E+DA +S++D + D
Sbjct: 608 REMKDKGFEYDAITYSSILDAVGNVDHEKD 637
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 103/215 (47%), Gaps = 7/215 (3%)
Query: 4 TCISLLKSCKSM----CELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
T +S+L +C + +K+I F G D M + G+ + +F
Sbjct: 253 TLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC--RCGNVSLSRVLF 310
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVG 119
+ + + ++ MI +A+ G ++L Q+R++G+ ++ T ++ A +
Sbjct: 311 ETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLS 370
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCV 179
VH+ ++K G + N+L+DMYA+ G LS +E+F E ++D VSW+ MI+
Sbjct: 371 FASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYG 430
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
EA+E F+ M ++ + ++ ++ L+AC
Sbjct: 431 LHGHGSEALEIFKGM-IKGGHEVDDMAFLAILSAC 464
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 8/184 (4%)
Query: 51 DFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
D A +FD ++ + ++ MI ++ + LF+ ++ + + P+ T VL
Sbjct: 200 DHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLP 259
Query: 111 AIGCLGDVGQG----RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR 166
A C+ ++ G +++H F + G D + + M MY G +S + LFE + R
Sbjct: 260 A--CV-ELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVR 316
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
D V W+ MISG E + +MR E E N T+++ ++AC +
Sbjct: 317 DVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIE-ANSVTLLAIVSACTNSTLLSFASTV 375
Query: 227 HSYI 230
HS I
Sbjct: 376 HSQI 379
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 107/228 (46%), Gaps = 6/228 (2%)
Query: 7 SLLKSCKSMCELKQIQALIFCSGLQQ--DRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ 64
S++K+C E + A + C L+ D DT+ IS + + ++FD +
Sbjct: 51 SVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLH 110
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ-GRK 123
+Y +I + + G A+ L +++ G P + +L +G + R
Sbjct: 111 RDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARM 170
Query: 124 VHAFV-IKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCK 182
HA V + ++ + +L+DMY + + +F++ ++ VSW MISGCV +
Sbjct: 171 FHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQ 230
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALR-NAEVGKEIHSY 229
++ ++ F+ M+ E+ +PN T++S L AC L + + KEIH +
Sbjct: 231 NYEMGVDLFRAMQRENL-RPNRVTLLSVLPACVELNYGSSLVKEIHGF 277
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
G ++H +K+G + D V NSL+ MYA+ R +++F+E RD VS+ +I+ C +
Sbjct: 66 GAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQ 125
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAAL-RNAEVGKEIHSYI 230
EA++ + M P V S L C + +++V + H+ +
Sbjct: 126 DGLLYEAMKLIKEMYFYGF-IPKSELVASLLALCTRMGSSSKVARMFHALV 175
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 63 QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGR 122
Q+ + YNVMIKA+ K +A+SLF+ ++ G WPD TY + + + + V + +
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQ 570
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF---EETPDRDN-VSWNIMISGC 178
++ A ++ SG + +++ Y LG LSD +L+ E+T + N V + +I+G
Sbjct: 571 RILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Query: 179 VRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
+EAI++F RM E + N + S + A
Sbjct: 631 AESGMVEEAIQYF-RMMEEHGVQSNHIVLTSLIKA 664
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+P+ Y +I FA+ G AI F+ + E GV ++ ++KA +G + + R+
Sbjct: 617 KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARR 676
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR---DNVSWNIMISGCVR 180
V+ + S D NS++ + A+LG +S+ + +F ++ D +S+ M+
Sbjct: 677 VYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKG 736
Query: 181 CKRFQEAIEFFQRMR 195
EAIE + MR
Sbjct: 737 MGMLDEAIEVAEEMR 751
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 93/214 (43%), Gaps = 36/214 (16%)
Query: 50 GDFHYALRIFDHIQQPSL---FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYP 106
GD AL +F + P L ++N +I +A+ G A+ + + E+G+ D +++
Sbjct: 207 GDIDKALSVF--WRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFG 264
Query: 107 YVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM-------------------- 146
VL + L + G++VHA V+K+G + +V + ++D+
Sbjct: 265 AVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFG 324
Query: 147 -----------YAELGRLSDFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
Y+ G++ + K LF+ +++ V W M G + ++ +E +
Sbjct: 325 NLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFI 384
Query: 196 MESKEKPNEATVVSTLTACAALRNAEVGKEIHSY 229
P+ +VS L AC+ E GKEIH +
Sbjct: 385 ANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGH 418
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 47 SSIGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLR----EDGVWPDN 102
SS G A R+FD + + +L + M + + R+ S+ + R + PD+
Sbjct: 337 SSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL---NLRQPDSVLELARAFIANETNTPDS 393
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
VL A + G+++H +++G+ D + + +DMY++ G + + +F+
Sbjct: 394 LVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDS 453
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTAC 214
+ +RD V +N MI+GC ++ + F+ M E KP+E T ++ L+AC
Sbjct: 454 SFERDTVMYNAMIAGCAHHGHEAKSFQHFEDM-TEGGFKPDEITFMALLSAC 504
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 96/208 (46%), Gaps = 45/208 (21%)
Query: 64 QPSLFNYNVMIKAFAKK-GSFRRAISLFQQLR---EDGVWPDNYTYPYVLKAIGCLGDVG 119
+ L YN ++ FAK G AI +F ++ +D +W D++T ++K L +V
Sbjct: 83 ERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF 142
Query: 120 QGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKE--------------------- 158
G ++H ++K+G + + +SL+ MY++ G+ FKE
Sbjct: 143 YGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGK---FKEVCNIFNGSCVEFVDSVARNAM 199
Query: 159 ---------------LFEETPD-RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKP 202
+F P+ D +SWN +I+G + +EA++ M E+ K
Sbjct: 200 IAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME-ENGLKW 258
Query: 203 NEATVVSTLTACAALRNAEVGKEIHSYI 230
+E + + L ++L++ ++GKE+H+ +
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARV 286
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 16/183 (8%)
Query: 6 ISLLKSCKSMCEL---KQIQALIFCSGLQQDRDTLNKLMAISTD--SSIGDFHYALRIFD 60
+S+L +C + K+I +G+ D+ KL+ D S G+ YA RIFD
Sbjct: 397 VSVLGACSLQAYMEPGKEIHGHSLRTGILMDK----KLVTAFVDMYSKCGNVEYAERIFD 452
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
+ YN MI A G ++ F+ + E G PD T+ +L A G V +
Sbjct: 453 SSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLE 512
Query: 121 GRKVHAFVIKS---GLEFDAYVCNSLMDMYAELGRLSDFKELFE--ETPDRDNVSWNIMI 175
G K +I++ E Y C ++D+Y + RL EL E + ++D V +
Sbjct: 513 GEKYFKSMIEAYNISPETGHYTC--MIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFL 570
Query: 176 SGC 178
+ C
Sbjct: 571 NAC 573
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 9/174 (5%)
Query: 50 GDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
GD +L +FD +++ P++ +N +I +K +A+ + ++ GV + +TY
Sbjct: 603 GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTY 662
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGR----LSDFKELFE 161
+++ +GD G+ + + GL+ D + +L+ + GR L+ KE+
Sbjct: 663 TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSA 722
Query: 162 ETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
R++ +NI+I G R EA + Q+M+ E KP+ T S ++AC+
Sbjct: 723 RNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV-KPDIHTYTSFISACS 775
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 103/229 (44%), Gaps = 18/229 (7%)
Query: 13 KSMCELKQIQALIF------CSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ-- 64
K++C Q++ I GL D T +M + GD ALRI + + +
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEE--GDLDGALRIREQMVEFG 254
Query: 65 --PSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQG 121
S + NV++ F K+G A++ Q++ +DG +PD YT+ ++ + G V
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRD----NVSWNIMISG 177
++ +++ G + D Y NS++ +LG + + E+ ++ RD V++N +IS
Sbjct: 315 IEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIST 374
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+ + +EA E R+ P+ T S + RN V E+
Sbjct: 375 LCKENQVEEATE-LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 79/152 (51%), Gaps = 5/152 (3%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P + +N +I+ + R A+ LF+++R G PD +TY ++ ++ G + + +
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP----DRDNVSWNIMISGCVR 180
+ SG N+L+D + + + + +E+F+E R++V++N +I G +
Sbjct: 458 LKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK 517
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTLT 212
+R ++A + +M ME +KP++ T S LT
Sbjct: 518 SRRVEDAAQLMDQMIMEG-QKPDKYTYNSLLT 548
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 91/207 (43%), Gaps = 12/207 (5%)
Query: 29 GLQQDRDTLNKLMAISTDSS----IGDFHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFR 84
GL+ D N+++ + D + + H + ++ +P + +NV+IKA + R
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG--IKPDVSTFNVLIKALCRAHQLR 206
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
AI + + + G+ PD T+ V++ GD+ ++ +++ G + N ++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 145 DMYAELGRLSDFKELFEETPDRDNV-----SWNIMISGCVRCKRFQEAIEFFQRMRMESK 199
+ + GR+ D +E ++D ++N +++G + + AIE M E
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 200 EKPNEATVVSTLTACAALRNAEVGKEI 226
+ P+ T S ++ L + E+
Sbjct: 327 D-PDVYTYNSVISGLCKLGEVKEAVEV 352
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 5/146 (3%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P + +N ++ K G + AI + + ++G PD YTY V+ + LG+V + +V
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVR 180
+I + N+L+ + ++ + EL + D ++N +I G
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEAT 206
+ + A+E F+ MR + E P+E T
Sbjct: 413 TRNHRVAMELFEEMRSKGCE-PDEFT 437
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 17/163 (10%)
Query: 55 ALRIFDHIQQPSL----FNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
A IFD ++ + YN +I K A L Q+ +G PD YTY +L
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE-------- 162
GD+ + + + +G E D +L+ + GR+ +L
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEA 205
TP ++N +I G R ++ EAI F+ M +E E P +A
Sbjct: 609 TPH----AYNPVIQGLFRKRKTTEAINLFREM-LEQNEAPPDA 646
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 99/209 (47%), Gaps = 12/209 (5%)
Query: 1 MKGTCISLLKSCKSMCEL-KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
+KG S + +S+C K I+A+ S + + + +M + S++G I
Sbjct: 403 VKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIH 462
Query: 60 DHIQQ-------PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAI 112
D ++ P +F YN++I +F + G AI++F++L PD +Y ++ +
Sbjct: 463 DLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCL 522
Query: 113 GCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DN 168
G GDV + + + GL D ++LM+ + + R+ LFEE + +
Sbjct: 523 GKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNI 582
Query: 169 VSWNIMISGCVRCKRFQEAIEFFQRMRME 197
V++NI++ + R EA++ + +M+ +
Sbjct: 583 VTYNILLDCLEKNGRTAEAVDLYSKMKQQ 611
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 105/219 (47%), Gaps = 14/219 (6%)
Query: 9 LKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ---- 64
L + + + +I LI + D D ++ +S+ D AL +F +++
Sbjct: 53 LSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPD--QALDVFKRMREIFGC 110
Query: 65 -PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P++ +YN ++ AF + + + SLF GV P+ TY ++K + + R
Sbjct: 111 EPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARG 170
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCV 179
++ K G + D + +++++ A+ G+L D ELF+E +R D +NI+I G +
Sbjct: 171 FLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFL 230
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEAT---VVSTLTACA 215
+ K + A+E + R+ +S PN T ++S L+ C
Sbjct: 231 KEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P+L YNV+IK KK F +A + ++G PD ++Y V+ + G + ++
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAE----LGRLSDFKELFEETPDRDNV-SWNIMISGCV 179
+ + G+ D N L+D + + + + L E++ NV + NIMISG
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 180 RCKRFQEAIEFFQRMRMESKEK 201
+C R + ++ ++RM+ +EK
Sbjct: 267 KCGRVDDCLKIWERMKQNEREK 288
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 42/205 (20%)
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY----------P 106
RI +H ++ +YN++IK + G A +++ + G D TY
Sbjct: 349 RIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNG 408
Query: 107 YVLKAIGCLGDV---GQGRKVHAF----------------------VIKSGLEFDAYVCN 141
YV KA+G + +V G V+A+ + K G+E +++VCN
Sbjct: 409 YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 142 SLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
+L+ RL + +E+ + VS+NI+I G + +F EA F + M +E
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM-LE 527
Query: 198 SKEKPNEATVVSTLTACAALRNAEV 222
+ KP+ T ++ C R+ ++
Sbjct: 528 NGWKPDLKTY--SILLCGLCRDRKI 550
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/152 (20%), Positives = 72/152 (47%), Gaps = 8/152 (5%)
Query: 51 DFHYALRIFDHIQQ-----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
D A+ ++D + + P++ +N+MI +K G + ++++++++ D YTY
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF---EE 162
++ + G+V + V + + D N+++ + G++ + EL+ E
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEH 353
Query: 163 TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
+ VS+NI+I G + + EA ++ M
Sbjct: 354 KNSVNIVSYNILIKGLLENGKIDEATMIWRLM 385
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 8/156 (5%)
Query: 50 GDFHYALRIFDHI----QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G + +F+++ +P++ Y V+I +AK GS AI L ++ ++G PD TY
Sbjct: 341 GKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTY 400
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
V+ + G V + GL ++ +SL+D + GR+ + + LFEE +
Sbjct: 401 SVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSE 460
Query: 166 ----RDNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
RD+ +N +I + ++ EAI F+RM E
Sbjct: 461 KGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 70/143 (48%), Gaps = 5/143 (3%)
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG 116
R+ D +P + Y+V++ K G A+ F R DG+ ++ Y ++ +G G
Sbjct: 387 RMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAG 446
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF-----EETPDRDNVSW 171
V + ++ + + G D+Y N+L+D + + ++ + LF EE D+ ++
Sbjct: 447 RVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Query: 172 NIMISGCVRCKRFQEAIEFFQRM 194
I++SG + R +EA++ + M
Sbjct: 507 TILLSGMFKEHRNEEALKLWDMM 529
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 99/234 (42%), Gaps = 51/234 (21%)
Query: 13 KSMCELKQIQALIFC------SGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ--- 63
KS +L ++ L++ +G++ T N LM + D A R+F+ ++
Sbjct: 195 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVD--SAERVFEVMESGR 252
Query: 64 -QPSLFNYNVMIKAFAKKGSFRRA-----------------------------------I 87
+P + YN MIK + K G ++A +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 88 SLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMY 147
+L+Q++ E G+ + + V+ + G + +G V +I+ G + + + L+D Y
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 148 AELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
A+ G + D L D D V+++++++G + R +EA+++F R +
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD 426
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 4/139 (2%)
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK 130
N +IK+F K G + ++++++E+G+ P YTY +++ + V +V +
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQE 186
++ D N+++ Y + G+ E + R D +++ MI C F
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 187 AIEFFQRMRMESKEKPNEA 205
+ +Q M + + P A
Sbjct: 311 CVALYQEMDEKGIQVPPHA 329
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 4/136 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
PS+++YN+++ K G A ++ ++ +GV PD TY +L +G V + +
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVR 180
++++ +AY CN L+ ++GR+S+ +EL + ++ D V+ NI++ G
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 181 CKRFQEAIEFFQRMRM 196
+AIE + MR+
Sbjct: 479 SGELDKAIEIVKGMRV 494
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 18/143 (12%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P+ YN ++ +F ++G + + +++RE+G+ PD T+ + A+ +G+ +
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISAL-----CKEGKVL 269
Query: 125 HAFVIKSGLEFDAYVC---------NSLMDMYAELGRLSDFKELFEETPDRDNV----SW 171
A I S +E D Y+ N ++ + ++G L D K LFE + D++ S+
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 172 NIMISGCVRCKRFQEAIEFFQRM 194
NI + G VR +F EA ++M
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQM 352
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 17/191 (8%)
Query: 29 GLQQDRDTLN-KLMAISTDSSIGDFHYALRIFDHIQ--------QPSLFNYNVMIKAFAK 79
GL D T N ++ A+ + + D A RIF ++ +P+ YN+M+K F K
Sbjct: 247 GLVPDIVTFNSRISALCKEGKVLD---ASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 80 KGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYV 139
G A +LF+ +RE+ +Y L+ + G + V + G+ Y
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 140 CNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
N LMD +LG LSD K + D V++ ++ G + A Q M
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEM- 422
Query: 196 MESKEKPNEAT 206
M + PN T
Sbjct: 423 MRNNCLPNAYT 433
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 11/181 (6%)
Query: 50 GDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
GD AL F+ ++ P++ N + + AK G R A +F L++ G+ PD+ TY
Sbjct: 447 GDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTY 506
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF----E 161
++K +G++ + K+ + ++++G E D V NSL++ + R+ + ++F E
Sbjct: 507 NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE 566
Query: 162 ETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAE 221
V++N +++G + + QEAIE F+ M K P +TL C +N E
Sbjct: 567 MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMV--QKGCPPNTITFNTLFDCLC-KNDE 623
Query: 222 V 222
V
Sbjct: 624 V 624
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 93/219 (42%), Gaps = 15/219 (6%)
Query: 16 CELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFNYNVMIK 75
CE I I SGL + A + D ++ D +Y L + D P+ Y +I
Sbjct: 851 CEANTITHNIVISGLVK---------AGNVDDAL-DLYYDL-MSDRDFSPTACTYGPLID 899
Query: 76 AFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEF 135
+K G A LF+ + + G P+ Y ++ G G+ + ++K G+
Sbjct: 900 GLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRP 959
Query: 136 DAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
D + L+D +GR+ + FKEL E + D V +N++I+G + R +EA+ F
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 192 QRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIHSYI 230
M+ P+ T S + E +I++ I
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEI 1058
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 75/170 (44%), Gaps = 10/170 (5%)
Query: 50 GDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G+F A D ++ P+L YN +I + A+ LF + GV P YTY
Sbjct: 377 GNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTY 436
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
+ G GD + + G+ + CN+ + A+ GR + K++F D
Sbjct: 437 IVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKD 496
Query: 166 ----RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
D+V++N+M+ + EAI+ M ME+ +P + VV++L
Sbjct: 497 IGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM-MENGCEP-DVIVVNSL 544
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 11/216 (5%)
Query: 19 KQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ----PSLFNYNVMI 74
K++ A + SGL D T L+ + GD ++F ++ P L ++ M+
Sbjct: 325 KEVFAEMLRSGLSPDSTTYRSLLMEACKK--GDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 75 KAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLE 134
F + G+ +A+ F ++E G+ PDN Y +++ G + + +++ G
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 135 FDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEF 190
D N+++ + L + +LF E +R D+ + I+I G + Q A+E
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 191 FQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
FQ+M+ E + + + T + L + + + KEI
Sbjct: 503 FQKMK-EKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 14/171 (8%)
Query: 18 LKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVM 73
L Q+Q G+ D T N L IS SS G A + + + P ++ YN +
Sbjct: 258 LSQVQE----KGVYPDIVTYNTL--ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV 311
Query: 74 IKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGL 133
I K G + RA +F ++ G+ PD+ TY +L GDV + KV + + +
Sbjct: 312 INGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDV 371
Query: 134 EFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCVR 180
D +S+M ++ G L F + E DNV + I+I G R
Sbjct: 372 VPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P + YN +I A++ KG A L + G P YTY V+ + G + ++V
Sbjct: 268 PDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEV 327
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVS----WNIMISGCVR 180
A +++SGL D+ SL+ + G + + +++F + RD V ++ M+S R
Sbjct: 328 FAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR 387
Query: 181 CKRFQEAIEFFQRMR 195
+A+ +F ++
Sbjct: 388 SGNLDKALMYFNSVK 402
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 73/171 (42%), Gaps = 8/171 (4%)
Query: 35 DTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL----FNYNVMIKAFAKKGSFRRAISLF 90
D+ + I +G+ A+ +F +++ + YN ++ F K G A ++
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIW 538
Query: 91 QQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAEL 150
+ + P +Y ++ A+ G + + +V +I ++ +CNS++ Y
Sbjct: 539 ADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS 598
Query: 151 GRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQRMRME 197
G SD + E+ D +S+N +I G VR + +A ++M E
Sbjct: 599 GNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 17/183 (9%)
Query: 24 LIFCSGLQQDRDTLNKLM-AISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFA 78
++ SGL+ D T N L+ A S DS++ A+++F+ ++ QP L+ YN MI +
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDG---AVKVFEDMEAHRCQPDLWTYNAMISVYG 343
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAY 138
+ G A LF +L G +PD TY +L A + + ++V+ + K G D
Sbjct: 344 RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 139 VCNSLMDMYAELGRLS-------DFKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFF 191
N+++ MY + G+L D K L P D +++ ++I + R EA
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP--DAITYTVLIDSLGKANRTVEAAALM 461
Query: 192 QRM 194
M
Sbjct: 462 SEM 464
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 72/164 (43%), Gaps = 7/164 (4%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAF-- 127
YN M+ +++ G F +A L +R+ G PD ++ ++ A G + V
Sbjct: 228 YNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDM 287
Query: 128 VIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKR 183
V SGL DA N+L+ + L ++FE+ D ++N MIS RC
Sbjct: 288 VRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGL 347
Query: 184 FQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEIH 227
EA F + ++ P+ T S L A A RN E KE++
Sbjct: 348 AAEAERLFMELELKGF-FPDAVTYNSLLYAFARERNTEKVKEVY 390
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 21/189 (11%)
Query: 27 CSGLQQDRDTLNKLMAISTDSSI------------GDFHY-ALRIFDHI----QQPSLFN 69
CS L L K++ + + SI GD Y AL +FD + +P++
Sbjct: 129 CSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVI 188
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
YN +I K A+ L ++ +DG+ PD TY ++ + G ++ + +
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE----TPDRDNVSWNIMISGCVRCKRFQ 185
K + D + N+L+D + GR+S+ +E +EE + D D V+++++I G R
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 186 EAIEFFQRM 194
EA E F M
Sbjct: 309 EAEEMFGFM 317
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 10/174 (5%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFR 84
G+ D T N L IS S G + A R+ + + P +F +N +I A K+G
Sbjct: 216 GIGPDVVTYNSL--ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
A ++++ + PD TY ++ + + + ++ F++ G D + L+
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 145 DMYAELGRLSDFKELFEETPD----RDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
+ Y + ++ +LF E R+ V++ I+I G R + A E F+RM
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 14/186 (7%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIF-DHIQQ---PSLFNYNVMIKAFAKKGSFR 84
G++ D T N L+A S G + A R+ D + + P++ + +I F K+G F
Sbjct: 204 GVRADAVTYNSLVAGLCCS--GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS 261
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
A+ L++++ V PD +TY ++ + G V + +++ ++ G D N+L+
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLI 321
Query: 145 DMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKE 200
+ + + R+ + +LF E R D +++N +I G + R A E F RM
Sbjct: 322 NGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM----DS 377
Query: 201 KPNEAT 206
+PN T
Sbjct: 378 RPNIRT 383
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 50 GDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G F A+++++ + + P +F YN +I G A + + G PD TY
Sbjct: 258 GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTY 317
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
++ V +G K+ + + GL D N+++ Y + GR +E+F
Sbjct: 318 NTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Query: 166 RDNV-SWNIMISGCVRCKRFQEAIEFFQRMRMESKE 200
R N+ +++I++ G R ++A+ F+ M+ E
Sbjct: 378 RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 413
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 42 AISTDSSIGDFHYALRIFDHIQ----------QPSLFNYNVMIKAFAKKGSFRRAISLFQ 91
++ S I F R+FD I +P + YN +I K G A+ LF
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFD 198
Query: 92 QLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELG 151
++ DGV D TY ++ + C G ++ ++ + + +++D++ + G
Sbjct: 199 RMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
Query: 152 RLSDFKELFEETP----DRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
+ S+ +L+EE D D ++N +I+G R EA + M
Sbjct: 259 KFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 4/134 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
PS+ +++ ++ AK ++ ISLF + G+ D Y+Y V+ + V
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKEL---FEETPDR-DNVSWNIMISGCVR 180
++K G E D +SL++ + + R+ D +L EE R D V +N +I G +
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 181 CKRFQEAIEFFQRM 194
+A+E F RM
Sbjct: 187 IGLVNDAVELFDRM 200
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 33 DRDTLNKLMAISTDSSIGDFHYALRIFD-----HIQQPSLFNYNVMIKAFAKKGSFRRAI 87
D D +N ++I S GD A ++F+ + + + YN M+ +F KKG F+ A
Sbjct: 593 DVDMMNTFLSIYL--SKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTAR 650
Query: 88 SLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMY 147
+ Q+ E+ D TY +++ +G +G V + K G D + N+L++
Sbjct: 651 GVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINAL 710
Query: 148 AELGRLSDFKELFEETP----DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPN 203
+ RL + +LF+ + D VS+N MI + + +EA ++ + M +++ PN
Sbjct: 711 GKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAM-LDAGCLPN 769
Query: 204 EAT 206
T
Sbjct: 770 HVT 772
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFR 84
GL+ D N LM + S G + A IF +Q +P +YN+M+ A+ + G
Sbjct: 329 GLEPDVYVYNALM--ESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 386
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
A ++F++++ G+ P ++ +L A DV + + + ++G+E D +V NS++
Sbjct: 387 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 145 DMYAELGRLSDFKELFEETPD----RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKE 200
++Y LG+ + +++ E + D ++NI+I+ + + E F ++ E
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK-EKNF 505
Query: 201 KPNEATVVSTLTA 213
+P+ T S + A
Sbjct: 506 RPDVVTWTSRIGA 518
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%)
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
H +P++ Y ++ AFA++G +A +F+QL+EDG+ PD Y Y ++++ G
Sbjct: 293 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYG 352
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
++ + + G E D N ++D Y G SD + +FEE
Sbjct: 353 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEE 394
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 50 GDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G+ A+ +F ++ +P+ YN+MI + K + L+ ++R P+ TY
Sbjct: 243 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 302
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEET-- 163
++ A G + ++ + + GLE D YV N+LM+ Y+ G E+F
Sbjct: 303 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 362
Query: 164 ----PDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
PDR S+NIM+ R +A F+ M+
Sbjct: 363 MGCEPDR--ASYNIMVDAYGRAGLHSDAEAVFEEMK 396
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 13/196 (6%)
Query: 39 KLMAISTDSSIGDFHYALRIFDHIQQPSLFN---------YNVMIKAFAKKGSFRRAISL 89
+L+ I + S+GD Y L + + + F YN ++ + A+ G +
Sbjct: 146 RLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQV 205
Query: 90 FQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAE 149
+ ++ ED V P+ YTY ++ LG+V + + + ++++GL+ D + SL+ Y +
Sbjct: 206 YMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQ 265
Query: 150 LGRLSDFKELFEETP----DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEA 205
L ++F E P R+ V++ +I G +R EA++ F +M+ +
Sbjct: 266 RKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRT 325
Query: 206 TVVSTLTACAALRNAE 221
V + C + R +E
Sbjct: 326 YTVLIKSLCGSERKSE 341
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 95/193 (49%), Gaps = 11/193 (5%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFR 84
GL+ D N LM + S G + A IF +Q +P +YN+M+ A+ + G
Sbjct: 351 GLEPDVYVYNALM--ESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHS 408
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
A ++F++++ G+ P ++ +L A DV + + + ++G+E D +V NS++
Sbjct: 409 DAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 145 DMYAELGRLSDFKELFEETPD----RDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKE 200
++Y LG+ + +++ E + D ++NI+I+ + + E F ++ E
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELK-EKNF 527
Query: 201 KPNEATVVSTLTA 213
+P+ T S + A
Sbjct: 528 RPDVVTWTSRIGA 540
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%)
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
H +P++ Y ++ AFA++G +A +F+QL+EDG+ PD Y Y ++++ G
Sbjct: 315 HQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYG 374
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
++ + + G E D N ++D Y G SD + +FEE
Sbjct: 375 AAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEE 416
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 50 GDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G+ A+ +F ++ +P+ YN+MI + K + L+ ++R P+ TY
Sbjct: 265 GNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTY 324
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEET-- 163
++ A G + ++ + + GLE D YV N+LM+ Y+ G E+F
Sbjct: 325 TALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQH 384
Query: 164 ----PDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
PDR S+NIM+ R +A F+ M+
Sbjct: 385 MGCEPDR--ASYNIMVDAYGRAGLHSDAEAVFEEMK 418
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 27/236 (11%)
Query: 4 TCISLLKSCKSMCELKQIQALIF----CSGLQQDRDTLNKLMAISTDSSIGDFHY---AL 56
T +L+ CK L Q A +F +G D+ T N L+ + G H A+
Sbjct: 281 TYNTLITCCKR-GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV-----YGKSHRPKEAM 334
Query: 57 RIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAI 112
++ + + PS+ YN +I A+A+ G A+ L Q+ E G PD +TY +L
Sbjct: 335 KVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGF 394
Query: 113 GCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE------TPDR 166
G V + + +G + + N+ + MY G+ ++ ++F+E +PD
Sbjct: 395 ERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMES--KEKPNEATVVSTLTACAALRNA 220
V+WN +++ + E F+ M+ E+ T++S + C + A
Sbjct: 455 --VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 50 GDFHYALRIFDHIQQPS----LFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G A +F+ +Q+ +++Y +I AFA G +R A+++F+++ EDG P TY
Sbjct: 187 GRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITY 246
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIK---SGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
+L G +G K+ + V K G+ DAY N+L+ + ++FEE
Sbjct: 247 NVILNVFGKMGT--PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEE 304
Query: 163 TP----DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
D V++N ++ + R +EA++ M + P+ T S ++A A
Sbjct: 305 MKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGF-SPSIVTYNSLISAYA 360
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 11/205 (5%)
Query: 16 CELKQIQALIFCSGLQQDRDTLNKLMAI----STDSSIGDFHYALRIFDHIQQPSLFNYN 71
E+ +I I GL D T N L+A+ DS + ++ + P +N
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV--PERETFN 493
Query: 72 VMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKS 131
+I A+++ GSF +A+++++++ + GV PD TY VL A+ G Q KV A +
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553
Query: 132 GLEFDAYVCNSLMDMYA---ELGRLSDF-KELFEETPDRDNVSWNIMISGCVRCKRFQEA 187
+ + SL+ YA E+G + +E++ + V ++ C +C EA
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613
Query: 188 IEFFQRMRMESKEKPNEATVVSTLT 212
F ++ E P+ T+ S ++
Sbjct: 614 ERAFSELK-ERGFSPDITTLNSMVS 637
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFR 84
G T N LM + + S+ DF + I I +P + +YN +I A+ + R
Sbjct: 659 GFTPSMATYNSLMYMHSRSA--DFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 716
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
A +F ++R G+ PD TY + + + V ++IK G + NS++
Sbjct: 717 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
Query: 145 DMYAELGRLSDFKELFEETPDRD 167
D Y +L R + K E+ + D
Sbjct: 777 DGYCKLNRKDEAKLFVEDLRNLD 799
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 7/144 (4%)
Query: 65 PSLFNYNVMIKAFAKKGSFRR-AISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P + YN +I K+GS + A +F++++ G D TY +L G + K
Sbjct: 277 PDAYTYNTLITC-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCV 179
V ++ +G NSL+ YA G L + EL + ++ D ++ ++SG
Sbjct: 336 VLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 180 RCKRFQEAIEFFQRMRMESKEKPN 203
R + + A+ F+ MR + KPN
Sbjct: 396 RAGKVESAMSIFEEMR-NAGCKPN 418
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 2/119 (1%)
Query: 79 KKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ-GRKVHAFVIKSGLEFDA 137
++G F+ I F ++ G+ + + VLKA + D G+ G++VHA IK G E D
Sbjct: 273 REGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDC 332
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDRDNVS-WNIMISGCVRCKRFQEAIEFFQRMR 195
+ L++MY + G++ D +++F+ + D +VS WN M++ ++ + EAI+ +M+
Sbjct: 333 LIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMK 391
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNVSWNIMISGCVR 180
++ ++KS + N L+ M+ GRL +++F+ P RD SW I+ GC+
Sbjct: 107 AHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIE 166
Query: 181 CKRFQEAIEFFQRMRMESKE---KPNEATVVSTLTACAALRNAEVGKEIHS 228
+++A F M S++ K + L ACA +R+ E+GK++H+
Sbjct: 167 MGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHA 217
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 10/174 (5%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQP----SLFNYNVMIKAFAKKGSFR 84
GL+ + T N L I+ + IGD R+ + + ++ Y +IK + KKG
Sbjct: 256 GLELNVVTYNSL--INGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLME 313
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
A +F+ L+E + D + Y ++ G + +VH +I+ G+ + +CNSL+
Sbjct: 314 EAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLI 373
Query: 145 DMYAELGRLSDFKELFEETPD----RDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
+ Y + G+L + +++F D D+ ++N ++ G R EA++ +M
Sbjct: 374 NGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 57 RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLG 116
R+ D +P YN ++ + + G A+ L Q+ + V P TY +LK +G
Sbjct: 391 RMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIG 450
Query: 117 DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWN 172
+ ++K G+ D C++L++ +LG ++ +L+E R D ++ N
Sbjct: 451 AFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLN 510
Query: 173 IMISGCVRCKRFQEAIEFFQRMRM 196
+MISG + ++ EA E + +
Sbjct: 511 VMISGLCKMEKVNEAKEILDNVNI 534
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 84/164 (51%), Gaps = 9/164 (5%)
Query: 5 CISLLKS-CKS--MCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDH 61
C SL+ CKS + E +QI + + L+ D T N L + G AL++ D
Sbjct: 369 CNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTL--VDGYCRAGYVDEALKLCDQ 426
Query: 62 IQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+ Q P++ YN+++K +++ G+F +SL++ + + GV D + +L+A+ LGD
Sbjct: 427 MCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGD 486
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFE 161
+ K+ V+ GL D N ++ ++ ++++ KE+ +
Sbjct: 487 FNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILD 530
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P+ YNV I K G A LF L D PD YTY ++ GD+ +
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCV 179
+ + G+ + N+L+ +LG + + L + P + + +++N +I G V
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 180 RCKRFQEAIEFFQRM 194
+ EA+ ++M
Sbjct: 837 KSGNVAEAMRLKEKM 851
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 103/222 (46%), Gaps = 14/222 (6%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ-- 63
I + K + + +++ + + G+ Q T N LM+ T + +I+D +Q
Sbjct: 254 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS-----YKEVSKIYDQMQRS 308
Query: 64 --QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
QP + +Y ++IKA+ + A+S+F+++ + GV P + Y +L A G V Q
Sbjct: 309 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 368
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP----DRDNVSWNIMISG 177
+ V + + + D + +++ Y + ++ F+ + + V++ +I G
Sbjct: 369 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 428
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
+ ++ +E +++MR+ S K N+ + + + A +N
Sbjct: 429 YAKANDVEKMMEVYEKMRL-SGIKANQTILTTIMDASGRCKN 469
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 50 GDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAISLFQQL---REDGVWPDN 102
G + A IF +Q +PS Y +++K F + F+ A +F+ L ++ + PD
Sbjct: 188 GKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQ 247
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM---YAELGRLSDFKEL 159
Y ++ G+ + RKV + ++ G+ NSLM Y E+ ++ D +
Sbjct: 248 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQR 307
Query: 160 FEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
+ PD VS+ ++I R +R +EA+ F+ M
Sbjct: 308 SDIQPDV--VSYALLIKAYGRARREEEALSVFEEM 340
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 11/181 (6%)
Query: 55 ALRIFDHI----QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
AL +F+ + +P+ YN+++ AFA G +A ++F+ +R D ++PD ++Y +L
Sbjct: 333 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 392
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP----DR 166
A D+ K + G E + +L+ YA+ + E++E+
Sbjct: 393 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 452
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA-EVGKE 225
+ ++ RCK F A+ +++ MES P + + L + A+ ++ E KE
Sbjct: 453 NQTILTTIMDASGRCKNFGSALGWYK--EMESCGVPPDQKAKNVLLSLASTQDELEEAKE 510
Query: 226 I 226
+
Sbjct: 511 L 511
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 103/222 (46%), Gaps = 14/222 (6%)
Query: 6 ISLLKSCKSMCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ-- 63
I + K + + +++ + + G+ Q T N LM+ T + +I+D +Q
Sbjct: 261 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETS-----YKEVSKIYDQMQRS 315
Query: 64 --QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQG 121
QP + +Y ++IKA+ + A+S+F+++ + GV P + Y +L A G V Q
Sbjct: 316 DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQA 375
Query: 122 RKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP----DRDNVSWNIMISG 177
+ V + + + D + +++ Y + ++ F+ + + V++ +I G
Sbjct: 376 KTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKG 435
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
+ ++ +E +++MR+ S K N+ + + + A +N
Sbjct: 436 YAKANDVEKMMEVYEKMRL-SGIKANQTILTTIMDASGRCKN 476
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 84/181 (46%), Gaps = 11/181 (6%)
Query: 55 ALRIFDHI----QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
AL +F+ + +P+ YN+++ AFA G +A ++F+ +R D ++PD ++Y +L
Sbjct: 340 ALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLS 399
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP----DR 166
A D+ K + G E + +L+ YA+ + E++E+
Sbjct: 400 AYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKA 459
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNA-EVGKE 225
+ ++ RCK F A+ +++ MES P + + L + A+ ++ E KE
Sbjct: 460 NQTILTTIMDASGRCKNFGSALGWYK--EMESCGVPPDQKAKNVLLSLASTQDELEEAKE 517
Query: 226 I 226
+
Sbjct: 518 L 518
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 12/155 (7%)
Query: 50 GDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAISLFQQL---REDGVWPDN 102
G + A IF +Q +PS Y +++K F + F+ A +F+ L ++ + PD
Sbjct: 195 GKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQ 254
Query: 103 YTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDM---YAELGRLSDFKEL 159
Y ++ G+ + RKV + ++ G+ NSLM Y E+ ++ D +
Sbjct: 255 KMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQR 314
Query: 160 FEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
+ PD VS+ ++I R +R +EA+ F+ M
Sbjct: 315 SDIQPDV--VSYALLIKAYGRARREEEALSVFEEM 347
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P++ ++V+I +F K+G R A L +++ G+ PD TY ++ + + +
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCV 179
+ ++ G + + N L++ Y + R+ D ELF + R D V++N +I G
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEAT 206
+ A E FQ M + K PN T
Sbjct: 450 ELGKLNVAKELFQEM-VSRKVPPNIVT 475
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+P + YN+MI KKG A LF+++ EDG PD +TY +++A GD + K
Sbjct: 540 KPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVK 599
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRL 153
+ + + G DA ++DM ++ GRL
Sbjct: 600 LIEELKRCGFSVDASTIKMVIDMLSD-GRL 628
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 73/136 (53%), Gaps = 4/136 (2%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+P++ +Y+ ++ AF K+G ++AI + +R G+ P+ YTY ++ A +G++ +
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV----SWNIMISGCV 179
+ +++ G+E++ +L+D + R+ + +ELF + + S+N +I G V
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 180 RCKRFQEAIEFFQRMR 195
+ K A+E ++
Sbjct: 484 KAKNMDRALELLNELK 499
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+P++F YN+MI K+G A LF++++ G+ PD TY ++ G +G +
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCV 179
+ E D N+L++ + + G+L E + E + VS++ ++
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFC 378
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
+ Q+AI+F+ MR PNE T S + A + N
Sbjct: 379 KEGMMQQAIKFYVDMR-RVGLVPNEYTYTSLIDANCKIGN 417
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFR 84
GL D T N + I +G + F+ ++ +P + YN +I F K G
Sbjct: 292 GLVPDTVTYNSM--IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
+ +++++ +G+ P+ +Y ++ A G + Q K + + + GL + Y SL+
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 145 DMYAELGRLSDFKELFEETPDRDNVSWNI-----MISGCVRCKRFQEAIEFFQRMRMESK 199
D ++G LSD L E + V WN+ +I G +R +EA E F +M +
Sbjct: 410 DANCKIGNLSDAFRLGNEML-QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD-TAG 467
Query: 200 EKPNEATVVSTLTACAALRNAEVGKEI 226
PN A+ + + +N + E+
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALEL 494
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P+L +YN +I F K + RA+ L +L+ G+ PD Y + + L + + V
Sbjct: 470 PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVV 529
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRD----NVSWNIMISGCVR 180
+ + G++ ++ + +LMD Y + G ++ L +E + D V++ ++I G +
Sbjct: 530 MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
K +A+++F R+ + + N A + +
Sbjct: 590 NKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 56 LRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCL 115
+++ D P YN+++ K G F A LF ++ + + PD Y Y ++
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498
Query: 116 GDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSW 171
GD + RKV + ++ G++ D N+++ + G L + + EE D ++
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY 558
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
+ +I G V+ + AI+ F+ M ++K KPN T S +
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYME-KNKCKPNVVTYTSLING 599
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P+ +Y +I+A+ K + A L Q+ E G PD TY ++ + G + +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVR 180
+I G+ DA + N LM + GR K LF E DR D + +I G +R
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 181 CKRFQEAIEFF 191
F EA + F
Sbjct: 498 SGDFDEARKVF 508
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%), Gaps = 8/165 (4%)
Query: 50 GDFHYALRIF----DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
GDF A ++F + + + ++N MIK F + G A++ ++ E+ + PD +TY
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY 558
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
++ D+ K+ ++ K+ + + SL++ + G +E F+E
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618
Query: 166 RD----NVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
RD V++ +I + E ++ + M +K PNE T
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVT 663
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 15 MCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ----PSLFNY 70
M E ++ +FC GL+ D T +L I+ G A R+ +H+ Q P++ Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTEL--INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK 130
+I K+G A L ++ + G+ P+ +TY ++ + G++ + K+
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQE 186
+GL D +LMD Y + G + +E+ +E + V++N++++G ++
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
+ M + PN AT ++L +RN
Sbjct: 580 GEKLLNWM-LAKGIAPN-ATTFNSLVKQYCIRN 610
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 4/134 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P Y +I F K+G R A F ++ + PD TY ++ +GD+ + K+
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCVR 180
+ GLE D+ L++ Y + G + D + + + V++ +I G +
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 181 CKRFQEAIEFFQRM 194
A E M
Sbjct: 469 EGDLDSANELLHEM 482
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 15 MCELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ----PSLFNY 70
M E ++ +FC GL+ D T +L I+ G A R+ +H+ Q P++ Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTEL--INGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 71 NVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIK 130
+I K+G A L ++ + G+ P+ +TY ++ + G++ + K+
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 519
Query: 131 SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQE 186
+GL D +LMD Y + G + +E+ +E + V++N++++G ++
Sbjct: 520 AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 579
Query: 187 AIEFFQRMRMESKEKPNEATVVSTLTACAALRN 219
+ M + PN AT ++L +RN
Sbjct: 580 GEKLLNWM-LAKGIAPN-ATTFNSLVKQYCIRN 610
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 4/134 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P Y +I F K+G R A F ++ + PD TY ++ +GD+ + K+
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCVR 180
+ GLE D+ L++ Y + G + D + + + V++ +I G +
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 181 CKRFQEAIEFFQRM 194
A E M
Sbjct: 469 EGDLDSANELLHEM 482
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
Y +I+ F + G A +F+Q+ + V D TY +L + G + + ++
Sbjct: 436 YTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ 495
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELF-EETPDRDNVSWNIMISGCVRCKRFQEAI 188
KS +E + ++ N++++ + G++ + +LF + D V++N MISG + QEA
Sbjct: 496 KSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 189 EFFQRMRMESKEKPNEAT----VVSTLTACAALRNAEVGKEIHS 228
+ F++M+ E PN T + + L C +AE+ KE+ S
Sbjct: 556 DLFRKMK-EDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 89/186 (47%), Gaps = 11/186 (5%)
Query: 50 GDFHYALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
GD AL + + ++ + ++ +N +I + K A+ LF ++ G+ P+ TY
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE--- 162
++ + G ++ + +++ + + N+L+D + + G+L + ++L EE
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 163 -TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKE-KPNEATVVSTLTACAALRNA 220
+ D D +++N++I+G R EA + F+ M SK+ PN T + + +
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFK--FMVSKDCLPNIQTYNTLINGFCKCKRV 414
Query: 221 EVGKEI 226
E G E+
Sbjct: 415 EDGVEL 420
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
PS+ +N ++ A AK F ISL +Q++ G+ D YTY + + V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVR 180
A ++K G E D +SL++ Y R+SD L ++ + D ++ +I G
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 181 CKRFQEAIEFFQRM 194
+ EA+ +M
Sbjct: 201 HNKASEAVALVDQM 214
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 6/152 (3%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P++ +N +I AF K+G A L +++ + + PD TY ++ + + ++
Sbjct: 325 NPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ 384
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCV 179
+ F++ + N+L++ + + R+ D ELF E R + V++ +I G
Sbjct: 385 MFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFF 444
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
+ A F+ +M S P + S L
Sbjct: 445 QAGDCDSAQMVFK--QMVSNRVPTDIMTYSIL 474
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
QP+ YN +I+A+ + G A+ L + ++ G+ P++ TY ++K + + V + +
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCV 179
+ + GLE + + +L+D Y +LG++ +E+ + + +++ +MI G
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 180 RCKRFQEAIEFFQRMR 195
R EA MR
Sbjct: 762 RDGNVTEASRLLNEMR 777
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 7/190 (3%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGD--FHYALRIFDHIQQPSLFNYNVMIKAF 77
+IQ I G DR + N L++ D F + + +P + Y+++I
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
AI + + +G+ PD YTY ++ +G++ ++ ++ +
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQR 193
V N L+ Y GRLS EL E+ + ++ ++ +I G R +EA F+
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 194 MRMESKEKPN 203
MRME E PN
Sbjct: 706 MRMEGLE-PN 714
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
QP+ YN +I+A+ + G A+ L + ++ G+ P++ TY ++K + + V + +
Sbjct: 642 QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKL 701
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCV 179
+ + GLE + + +L+D Y +LG++ +E+ + + +++ +MI G
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 180 RCKRFQEAIEFFQRMR 195
R EA MR
Sbjct: 762 RDGNVTEASRLLNEMR 777
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 7/190 (3%)
Query: 20 QIQALIFCSGLQQDRDTLNKLMAISTDSSIGD--FHYALRIFDHIQQPSLFNYNVMIKAF 77
+IQ I G DR + N L++ D F + + +P + Y+++I
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585
Query: 78 AKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDA 137
AI + + +G+ PD YTY ++ +G++ ++ ++ +
Sbjct: 586 FNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNT 645
Query: 138 YVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQR 193
V N L+ Y GRLS EL E+ + ++ ++ +I G R +EA F+
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEE 705
Query: 194 MRMESKEKPN 203
MRME E PN
Sbjct: 706 MRMEGLE-PN 714
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+ D P++ + +I F K+G RA LF+ + + G+ PD Y ++ G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNI 173
+G G K+ + + G++ D V +S +D+Y + G L+ +K + + + V++ I
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKP--NEATVVSTLTACAALRNA 220
+I G + R EA + ++ E ++++ C LR+
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P++ Y ++IK + G A ++ Q+ + G+ P TY ++ G++ G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELG------RLSDFKELFEETPDRDNVSWNIMISG 177
++ +IK G D + L+D ++ G R S ++ ++ + V +N +I G
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS--VKMLGQSIRLNVVVFNSLIDG 505
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
R RF EA++ F+ M + KP+ AT + +
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGI-KPDVATFTTVM 538
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 58 IFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD 117
+ D P++ + +I F K+G RA LF+ + + G+ PD Y ++ G
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 118 VGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNI 173
+G G K+ + + G++ D V +S +D+Y + G L+ +K + + + V++ I
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 174 MISGCVRCKRFQEAIEFFQRMRMESKEKP--NEATVVSTLTACAALRNA 220
+I G + R EA + ++ E ++++ C LR+
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSG 445
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P++ Y ++IK + G A ++ Q+ + G+ P TY ++ G++ G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELG------RLSDFKELFEETPDRDNVSWNIMISG 177
++ +IK G D + L+D ++ G R S ++ ++ + V +N +I G
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS--VKMLGQSIRLNVVVFNSLIDG 505
Query: 178 CVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTL 211
R RF EA++ F+ M + KP+ AT + +
Sbjct: 506 WCRLNRFDEALKVFRLMGIYGI-KPDVATFTTVM 538
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 21 IQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLF----NYNVMIKA 76
+ A + SG+Q D + N+L+ S D Y + + +P F +Y+ +I+
Sbjct: 277 VMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE--MEPRGFCDVVSYSTLIET 334
Query: 77 FAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFD 136
F + + R+A LF+++R+ G+ + TY ++KA G+ +K+ + + GL D
Sbjct: 335 FCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPD 394
Query: 137 AYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQ 192
+++D + G + F ++ E D +S+N +ISG R R EAI+ F+
Sbjct: 395 RIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
Query: 193 RMR 195
M+
Sbjct: 455 DMK 457
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 8/148 (5%)
Query: 55 ALRIFDHIQQPSLF----NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
A R+F+ ++Q + Y +IKAF ++G+ A L Q+ E G+ PD Y +L
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR---- 166
+ G+V + V +I+ + DA NSL+ GR+++ +LFE+ +
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRM 194
D +++ +I G +R K+ A + + +M
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQM 491
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 5/161 (3%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
YN +I F K G +A +L + + G PD TY +L + + V A ++
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSD-FKELFEETPDR---DNVSWNIMISGCVRCKRFQ 185
+SG++ DAY N L+ + + + + +E R D VS++ +I R +
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTR 342
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAEVGKEI 226
+A F+ MR + N T S + A N+ V K++
Sbjct: 343 KAYRLFEEMRQKGMVM-NVVTYTSLIKAFLREGNSSVAKKL 382
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 47 SSIGDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKG-SFRRAISLFQQLREDGVWPD 101
S G + A+ +F+ +++ P+L YNV++ F K G S+R+ + + ++R G+ D
Sbjct: 221 SRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFD 280
Query: 102 NYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELG----RLSDFK 157
+T VL A G + + ++ A + G E N+L+ ++ + G LS K
Sbjct: 281 EFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLK 340
Query: 158 ELFEETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
E+ E + D+V++N +++ VR +EA + M + PN T + + A
Sbjct: 341 EMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE-MMTKKGVMPNAITYTTVIDA 395
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 52 FHYALRIFDHIQ-QPSLFN---YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPY 107
+ A ++ D I Q L + Y ++ A+++ G + +AI LF++++E G P TY
Sbjct: 191 YSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNV 250
Query: 108 VLKAIGCLGDVGQGRKVHAFVIK---SGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
+L G +G RK+ + + GL+FD + C++++ A G L + KE F E
Sbjct: 251 ILDVFGKMGR--SWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELK 308
Query: 165 ----DRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA 213
+ V++N ++ + + EA+ + ME P ++ + L A
Sbjct: 309 SCGYEPGTVTYNALLQVFGKAGVYTEALSVLK--EMEENSCPADSVTYNELVA 359
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 5/156 (3%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+P YN +++ F K G + A+S+ +++ E+ D+ TY ++ A G +
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAG 372
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD----RDNVSWNIMISGCV 179
V + K G+ +A +++D Y + G+ + +LF + + ++N ++S
Sbjct: 373 VIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTACA 215
+ R E I+ M+ + PN AT + L C
Sbjct: 433 KKSRSNEMIKMLCDMK-SNGCSPNRATWNTMLALCG 467
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 42 AISTDSSIGDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDG 97
A DS +G +A+++ D ++ P + YNV++ K+G AI + G
Sbjct: 248 ATCRDSGVG---HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG 304
Query: 98 VWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFK 157
P+ T+ +L+++ G K+ A +++ G N L++ G L
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 158 ELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQRM 194
++ E+ P +++S+N ++ G + K+ AIE+ +RM
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 11/168 (6%)
Query: 61 HIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQ 120
H QP+ +YN ++ F K+ RAI +++ G +PD TY +L A+ G V
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVED 432
Query: 121 GRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMIS 176
++ + G N+++D A+ G+ +L +E + D ++++ ++
Sbjct: 433 AVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVG 492
Query: 177 GCVRCKRFQEAIEF---FQRMRMESKEKPNEATVVSTLTACAALRNAE 221
G R + EAI+F F+RM + +PN T S + R +
Sbjct: 493 GLSREGKVDEAIKFFHEFERMGI----RPNAVTFNSIMLGLCKSRQTD 536
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 49 IGDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYT 104
+G A +I + ++ P + YNVMI + K G A+S+ ++ V PD T
Sbjct: 150 LGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVT 206
Query: 105 YPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
Y +L+++ G + Q +V +++ D L++ + +L +E
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 165 DR----DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
DR D V++N++++G + R EAI+F M S +PN T
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMP-SSGCQPNVIT 311
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 5/159 (3%)
Query: 52 FHYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA 111
Y R+ P + YN M+ A K G A+ + QL G P TY V+
Sbjct: 399 IEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 112 IGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSD---FKELFEETPDRDN 168
+ G G+ K+ + L+ D +SL+ + G++ + F FE R N
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 169 -VSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEAT 206
V++N ++ G + ++ AI+F M + KPNE +
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFM-INRGCKPNETS 556
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 8/153 (5%)
Query: 50 GDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G+ AL +F +++ S+ Y+++I + K GSF A+SLF ++ G+ D TY
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
++ + G G K+ +I + D ++L+D++ + G+L + KEL+ E
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMIT 343
Query: 166 R----DNVSWNIMISGCVRCKRFQEAIEFFQRM 194
R D +++N +I G + EA + F M
Sbjct: 344 RGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 13/205 (6%)
Query: 12 CKSMC--ELKQIQALIFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ----P 65
CK C E Q+ L+ G + D T + L I++ +R+F I P
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSIL--INSYCKAKRVDDGMRLFREISSKGLIP 418
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
+ YN ++ F + G A LFQ++ GV P TY +L + G++ + ++
Sbjct: 419 NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIF 478
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRC 181
+ KS + + N ++ ++ D LF D+ D V++N+MI G +
Sbjct: 479 EKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Query: 182 KRFQEAIEFFQRMRMESKEKPNEAT 206
EA F++M+ E P++ T
Sbjct: 539 GSLSEADMLFRKMK-EDGCTPDDFT 562
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P YN +I F K+ A +F + G PD TY ++ + V G ++
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVR 180
+ GL + N+L+ + + G+L+ KELF+E R V++ I++ G
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 181 CKRFQEAIEFFQRMR 195
+A+E F++M+
Sbjct: 468 NGELNKALEIFEKMQ 482
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 60 DHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA 111
D +P + YNVMI KKGS A LF++++EDG PD++TY +++A
Sbjct: 518 DKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P +F+Y V+I F+K G+ ++A S+F ++ E+G+ P+ Y +L G++ + +++
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVR 180
+ GL +A +++D Y + G L++ LF+E + D+ + ++ GC R
Sbjct: 685 LDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 181 CKRFQEAIEFF 191
+ AI F
Sbjct: 745 LNDVERAITIF 755
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/157 (20%), Positives = 69/157 (43%), Gaps = 5/157 (3%)
Query: 69 NYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFV 128
Y V++ K A +F+++R G+ PD ++Y ++ LG++ + + +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 129 IKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRF 184
++ GL + + N L+ + G + KEL +E + + V++ +I G +
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 185 QEAIEFFQRMRMESKEKPNEATVVSTLTACAALRNAE 221
EA F M+++ P+ + + C L + E
Sbjct: 714 AEAFRLFDEMKLKGL-VPDSFVYTTLVDGCCRLNDVE 749
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P Y +I+ + ++ + R+ L ++++ + YTY V+K + GD+ +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCVR 180
+I SG + + +L+ + + R D KE+ E+ D +N +I G +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 181 CKRFQEAIEFFQRMRMESKEKPNEAT 206
KR EA F M +E+ KPN T
Sbjct: 500 AKRMDEARSFLVEM-VENGLKPNAFT 524
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
P+L YN M+K F + G R A F ++++ D TY V+ G G++ + R
Sbjct: 227 NPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARN 286
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCV 179
V +I+ G+ N+++ + + + + +FEE R + ++N++I G
Sbjct: 287 VFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEAT 206
F E QRM E E PN T
Sbjct: 347 HAGEFSRGEELMQRMENEGCE-PNFQT 372
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 50 GDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G+ A +FD + + PS+ YN MI+ KK + A+ +F+++ G P+ TY
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEET-- 163
+++ + G+ +G ++ + G E + N ++ Y+E + LFE+
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 164 ----PDRDNVSWNIMISGCVRCKRFQEAI 188
P+ D ++NI+ISG KR ++ +
Sbjct: 399 GDCLPNLD--TYNILISGMFVRKRSEDMV 425
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P + +YNV+++A+AK GS + A+ +F Q++ G P+ TY +L G G R++
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSD----FKELFEETPDRDNVSWNIMISGCVR 180
+ S + DA N L++++ E G + F ++ EE + D ++ +I C +
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGK 434
Query: 181 CKRFQEAIEFFQRM 194
++A + Q M
Sbjct: 435 GGLHEDARKILQYM 448
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFR 84
G+Q D T N L++ +GD A +F + P L Y+ +++ F K
Sbjct: 242 GIQPDIVTYNTLLSACAIRGLGD--EAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLE 299
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
+ L ++ G PD +Y +L+A G + + V + +G +A + L+
Sbjct: 300 KVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 145 DMYAELGRLSDFKELFEE----TPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKE 200
+++ + GR D ++LF E D D ++NI+I F+E + F M E+ E
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIE 419
Query: 201 KPNEATVVSTLTACAALRNAEVGKEIHSYI 230
P+ T + AC E ++I Y+
Sbjct: 420 -PDMETYEGIIFACGKGGLHEDARKILQYM 448
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 50 GDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKG-SFRRAISLFQQLREDGVWPDNYT 104
G + +L + D ++ PS+ YN +I A A+ G + + LF ++R +G+ PD T
Sbjct: 190 GRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVT 249
Query: 105 YPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP 164
Y +L A G + V + G+ D + L++ + +L RL +L E
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMA 309
Query: 165 D----RDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
D S+N+++ + +EA+ F +M+
Sbjct: 310 SGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 50 GDFHYAL----RIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G+FH AL + H PS+ Y +I + K G+ RA+ Q+R G+ P+ TY
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
++ G + + +V + +G N+L++ + G++ D + E+ +
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 166 R----DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKEKPNEATVVSTLTA-CAALRNA 220
+ D VS++ ++SG R EA+ +R +E KP+ T S + C R
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALR-VKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 221 E 221
E
Sbjct: 503 E 503
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P++F YN++I+ F G+ A++LF ++ G P+ TY ++ L + G K+
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVR 180
+ GLE + N +++ GR+ + + E R D V++N +I G +
Sbjct: 263 LRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 181 CKRFQEAIEFFQRM 194
F +A+ M
Sbjct: 323 EGNFHQALVMHAEM 336
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
PS+ YN +I G AI++ + ++E G+ PD +Y VL DV + +V
Sbjct: 413 PSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRV 472
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEE 162
+++ G++ D +SL+ + E R + +L+EE
Sbjct: 473 KREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P++ ++V+I +F K+G R A L +++ + G+ P+ TY ++ + + ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVR 180
+I G + D N L++ Y + R+ D ELF E R + V++N ++ G +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450
Query: 181 CKRFQEAIEFFQRM 194
+ + A + FQ M
Sbjct: 451 SGKLEVAKKLFQEM 464
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 5/141 (3%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
YN +++ F + G A LFQ++ V PD +Y +L + G++ + ++ +
Sbjct: 441 YNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQ 185
KS +E D + ++ ++ D +LF P + D ++NIMIS R
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 186 EAIEFFQRMRMESKEKPNEAT 206
+A F++M E P+E T
Sbjct: 561 KADILFRKM-TEEGHAPDELT 580
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 78/175 (44%), Gaps = 10/175 (5%)
Query: 28 SGLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSL----FNYNVMIKAFAKKGSF 83
+G Q + T ++ + S G A+ + +++ ++ Y+++I K GS
Sbjct: 222 TGFQPNEVTYGPVLNVMCKS--GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 84 RRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSL 143
A +LF ++ G D TY ++ G G K+ +IK + + + L
Sbjct: 280 DNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVL 339
Query: 144 MDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQRM 194
+D + + G+L + +L +E R + +++N +I G + R +EAI+ M
Sbjct: 340 IDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 4/140 (2%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P+ YN +I F K+ AI + + G PD T+ ++ + G ++
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVR 180
+ G+ + N+L+ + + G+L K+LF+E R D VS+ I++ G
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 181 CKRFQEAIEFFQRMRMESKE 200
++A+E F ++ E
Sbjct: 486 NGELEKALEIFGKIEKSKME 505
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 5/148 (3%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVI 129
Y +I+ G A +F+Q+ DGV PD TY +L + G + + +V ++
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 130 KSGLEFDAYVCNSLMDMYAELGRLSDFKELF----EETPDRDNVSWNIMISGCVRCKRFQ 185
KS ++ D Y+ ++++ + G++ D +LF + + V++N MISG + Q
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 186 EAIEFFQRMRMESKEKPNEATVVSTLTA 213
EA ++M+ E PN T + + A
Sbjct: 558 EAYALLKKMK-EDGPLPNSGTYNTLIRA 584
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 55 ALRIFDHIQ----QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
AL +F ++ +P++ Y+ +I G + A L + E + P+ T+ ++
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 111 AIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR---- 166
A G + K++ +IK ++ D + NSL++ + RL K++FE +
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRM 194
D V++N +I G + KR ++ E F+ M
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGD-VGQGR 122
P+L +N +I AF K+G F A L+ + + + PD +TY ++ C+ D + + +
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF-CMHDRLDKAK 385
Query: 123 KVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDR----DNVSWNIMISGC 178
++ F++ D N+L+ + + R+ D ELF E R D V++ +I G
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Query: 179 VRCKRFQEAIEFFQRM 194
A + F++M
Sbjct: 446 FHDGDCDNAQKVFKQM 461
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 14/206 (6%)
Query: 4 TCISLLKSC-KSMCELKQIQAL---IFCSGLQQDRDTLNKLMAISTDSSIGDFHYALRIF 59
T +++ +C K E KQ+ + +G+Q DR T N L+A+ S G + A +F
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVC--SRGGLWEAARNLF 362
Query: 60 DHIQ----QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCL 115
D + + +F+YN ++ A K G A + Q+ + P+ +Y V+
Sbjct: 363 DEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKA 422
Query: 116 GDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD----RDNVSW 171
G + + + G+ D N+L+ +Y ++GR + ++ E +D V++
Sbjct: 423 GRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
Query: 172 NIMISGCVRCKRFQEAIEFFQRMRME 197
N ++ G + ++ E + F M+ E
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKRE 508
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 65 PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKV 124
P++ +Y+ +I FAK G F A++LF ++R G+ D +Y +L +G + +
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDI 466
Query: 125 HAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPDRDNV-----SWNIMISGCV 179
+ G++ D N+L+ Y + G+ + K++F E R++V +++ +I G
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM-KREHVLPNLLTYSTLIDGYS 525
Query: 180 RCKRFQEAIEFFQRMR 195
+ ++EA+E F+ +
Sbjct: 526 KGGLYKEAMEIFREFK 541
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 9/161 (5%)
Query: 43 ISTDSSIGDFHYALRIFDHI----QQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGV 98
IST G A RIF+ +++ ++ +I A+ + G AIS+F ++E G+
Sbjct: 240 ISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL 299
Query: 99 WPDNYTYPYVLKAIGCLG-DVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFK 157
P+ TY V+ A G G + Q K + ++G++ D NSL+ + + G +
Sbjct: 300 RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAAR 359
Query: 158 ELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQRM 194
LF+E +R D S+N ++ + + A E +M
Sbjct: 360 NLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 55 ALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLK 110
AL ++D +++ P++ +N +I G A+ F +L E G+ PD+ T+ ++
Sbjct: 505 ALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSII- 563
Query: 111 AIGCLGDVGQGRKVHAF-----VIKSGLEFDAYVCNSLMDMYAELG----RLSDFKELFE 161
LG +GR AF IK + D Y CN L++ + G L+ F L E
Sbjct: 564 ----LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIE 619
Query: 162 ETPDRDNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
E + D V++N MIS + K+ +EA + M
Sbjct: 620 ER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 70 YNVMIKAFAKKGSFRRAISLFQQL-REDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFV 128
+NV++ + +G A+ + +++ E V PDN TY +LKA+ G + +++ +
Sbjct: 207 FNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDM 266
Query: 129 IKSGLEFDAYVCNSLMDMYAELGRLSD---FKELFEET---PDRDNVSWNIMISGCVRCK 182
K+GL + N+L+ Y +LG L + EL ++T PD ++NI+I+G
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDL--CTYNILINGLCNAG 324
Query: 183 RFQEAIEFFQRMRMESKEKPNEATVVSTLTACAAL 217
+E +E M+ K +P+ T + + C L
Sbjct: 325 SMREGLELMDAMK-SLKLQPDVVTYNTLIDGCFEL 358
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 11/175 (6%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQ-----PSLFNYNVMIKAFAKKGSF 83
G+++ +LN L+ + + D +A+ F + ++ P++F N+++KA KK
Sbjct: 150 GVKRSVRSLNTLLNVLIQNQRFDLVHAM--FKNSKESFGITPNIFTCNLLVKALCKKNDI 207
Query: 84 RRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSL 143
A + ++ G+ P+ TY +L GD+ ++V ++ G DA L
Sbjct: 208 ESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVL 267
Query: 144 MDMYAELGRLSDFKELFEETP----DRDNVSWNIMISGCVRCKRFQEAIEFFQRM 194
MD Y +LGR S+ + ++ + + V++ +MI + K+ EA F M
Sbjct: 268 MDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 8/149 (5%)
Query: 53 HYALRIFDHIQQPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAI 112
+ R+ + + S +Y +I + K+G+ A LF ++ GV P+ TY ++ A
Sbjct: 455 QWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAY 514
Query: 113 GCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM------DMYAELGRLSDFKELFEETPDR 166
G + + RK+ A + +G++ D+Y SL+ D E RL F E+ + D+
Sbjct: 515 CKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRL--FSEMGLKGLDQ 572
Query: 167 DNVSWNIMISGCVRCKRFQEAIEFFQRMR 195
++V++ +MISG + + EA + M+
Sbjct: 573 NSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 11/206 (5%)
Query: 29 GLQQDRDTLNKLMAISTDSSIGDFHYALRIFDHIQQPSLFN----YNVMIKAFAKKGSFR 84
G+ ++ T LM +S + G A ++FD +++ + + Y +I +KG+ +
Sbjct: 289 GVVYNKVTYTLLMELSVKN--GKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 85 RAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLM 144
RA LF +L E G+ P +YTY ++ + +G++G + + G+ V N+L+
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 145 DMYAELGRLSDFKELFEETPDR----DNVSWNIMISGCVRCKRFQEAIEFFQRMRMESKE 200
D Y G + + +++ + D + N + S R KR+ EA ++ RM ME
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM-MEGGV 465
Query: 201 KPNEATVVSTLTACAALRNAEVGKEI 226
K + + + + N E K +
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRL 491
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 50 GDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G+ +FD + + P YN +I+ F K G + A +F+ + E GV P+ YTY
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
++ + +G + ++ +I+ E +A N +++ + G ++D E+ E
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 166 R----DNVSWNIMISGCVRCKRFQEAIEFFQRMRMES 198
R DN+++NI++ G EA + M +S
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 50 GDFHYALRIFDHIQQ----PSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTY 105
G A R+F+ +Q+ P + ++N+MI K G + A SL + G+ PD +TY
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTY 602
Query: 106 PYVLKAIGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
++ LG + + ++ SG E DA++C+S++ G EL ++ D
Sbjct: 603 SKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Query: 166 RDNV 169
+D V
Sbjct: 663 KDIV 666
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 5/145 (3%)
Query: 66 SLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRKVH 125
SL + ++I AF K G A+ ++++ G+ D Y +++ G++ +G+ +
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 126 AFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFE---ETPDRDNV-SWNIMISGCVRC 181
V++ G A N+L+ + +LG+L + E+FE E R NV ++ +I G
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 182 KRFQEAIEFFQRMRMESKEKPNEAT 206
+ +EA++ M +E E+PN T
Sbjct: 331 GKTKEALQLLNLM-IEKDEEPNAVT 354
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 56/102 (54%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
QPS+F+YN ++ + K+GS +A LF++++ D +PD ++ ++ GD+
Sbjct: 526 QPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAES 585
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETPD 165
+ + ++GL D + + L++ + +LG L + F++ D
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVD 627
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 71/147 (48%), Gaps = 5/147 (3%)
Query: 64 QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKAIGCLGDVGQGRK 123
+ L Y +I+ F G R +LF ++ E G P TY +++ LG + + +
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 124 VHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELF----EETPDRDNVSWNIMISGCV 179
+ F+I+ G+ + Y L+D +G+ + +L E+ + + V++NI+I+
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 180 RCKRFQEAIEFFQRMRMESKEKPNEAT 206
+ +A+E + M+ + + +P+ T
Sbjct: 364 KDGLVADAVEIVELMK-KRRTRPDNIT 389
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 72/147 (48%), Gaps = 7/147 (4%)
Query: 55 ALRIFDHIQ---QPSLFNYNVMIKAFAKKGSFRRAISLFQQLREDGVWPDNYTYPYVLKA 111
A FD ++ +P + Y +++ + + G A +F++++ G+ P+ YTY V+ A
Sbjct: 240 AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA 299
Query: 112 IGCLGDVGQGRKVHAFVIKSGLEFDAYVCNSLMDMYAELGRLSDFKELFEETP----DRD 167
+ G + + V A ++ SG +A N+LM ++ + GR +++ + + D
Sbjct: 300 LCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 359
Query: 168 NVSWNIMISGCVRCKRFQEAIEFFQRM 194
+++N +I R + + A++ M
Sbjct: 360 TITYNFLIEAHCRDENLENAVKVLNTM 386