Miyakogusa Predicted Gene
- Lj0g3v0264329.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0264329.2 Non Chatacterized Hit- tr|J3LZ36|J3LZ36_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB04G2,29.38,2e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; UNKNOWN PROTEIN,NULL; FAMILY NOT
NAME,CUFF.17432.2
(304 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 357 6e-99
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 2e-69
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 3e-65
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 8e-64
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 238 4e-63
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 236 1e-62
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 235 2e-62
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 2e-61
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 230 1e-60
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 1e-60
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 7e-60
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 225 2e-59
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 3e-59
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 224 4e-59
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 6e-59
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 2e-58
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 222 3e-58
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 1e-57
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 1e-57
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 219 1e-57
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 219 2e-57
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 218 3e-57
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 5e-57
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 217 7e-57
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 1e-56
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 2e-56
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 3e-56
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 3e-56
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 4e-56
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 5e-56
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 5e-56
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 5e-56
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 6e-56
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 2e-55
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 2e-55
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 5e-55
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 6e-55
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 209 2e-54
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 4e-54
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 208 4e-54
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 207 5e-54
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 6e-54
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 6e-54
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 207 9e-54
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 3e-53
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 4e-53
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 4e-53
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 7e-53
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 7e-53
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 1e-52
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 202 2e-52
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 5e-52
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 201 6e-52
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 8e-52
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 200 9e-52
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 199 2e-51
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 199 2e-51
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 3e-51
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 4e-51
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 4e-51
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 7e-51
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 8e-51
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 9e-51
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 197 1e-50
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 1e-50
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 2e-50
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 2e-50
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 4e-50
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 4e-50
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 4e-50
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 194 4e-50
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 194 4e-50
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 193 1e-49
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 193 2e-49
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 2e-49
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 4e-49
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 4e-49
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 6e-49
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 7e-49
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 1e-48
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 4e-48
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 5e-48
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 5e-48
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 187 5e-48
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 7e-48
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 187 7e-48
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 8e-48
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 9e-48
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 9e-48
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 1e-47
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 186 2e-47
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 3e-47
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 3e-47
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 8e-47
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 9e-47
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 183 1e-46
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 2e-46
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 2e-46
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 2e-46
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 3e-46
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 181 6e-46
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 7e-46
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 7e-46
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 9e-46
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 1e-45
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 180 1e-45
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 3e-45
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 7e-45
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 9e-45
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 1e-44
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 1e-44
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 1e-44
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 2e-44
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 2e-44
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 3e-44
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 3e-44
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 175 4e-44
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 4e-44
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 175 4e-44
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 5e-44
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 7e-44
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 8e-44
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 9e-44
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 1e-43
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 2e-43
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 172 2e-43
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 5e-43
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 9e-43
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 1e-42
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 169 2e-42
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 2e-42
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 4e-42
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 5e-42
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 7e-42
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 1e-41
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 6e-41
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 8e-41
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 8e-41
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 1e-40
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 162 3e-40
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 4e-40
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 161 5e-40
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 160 1e-39
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 1e-39
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 159 2e-39
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 2e-39
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 158 4e-39
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 6e-39
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 1e-38
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 1e-38
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 1e-38
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 6e-38
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 6e-38
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 1e-37
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 2e-37
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 8e-37
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 4e-36
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 2e-35
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 3e-35
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 4e-35
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 8e-35
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 8e-34
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 7e-33
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 137 1e-32
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 3e-32
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 2e-29
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 3e-24
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 4e-24
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 3e-23
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 2e-20
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 9e-20
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 86 3e-17
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 3e-17
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 2e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 4e-16
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 7e-16
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 7e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 9e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 2e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 3e-15
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 3e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 3e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 9e-15
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 9e-15
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 2e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 3e-14
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 4e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 75 4e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 4e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 6e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 6e-14
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 1e-13
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 74 1e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 3e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 3e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 3e-13
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 72 4e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 4e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 4e-13
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 5e-13
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 7e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 8e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 8e-13
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 71 1e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 70 1e-12
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 1e-12
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 70 2e-12
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 69 3e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 4e-12
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 68 8e-12
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 67 2e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 4e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 65 7e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 64 1e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 64 1e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 64 2e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 2e-10
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 63 2e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 63 2e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 5e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 7e-10
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 9e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 9e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 1e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 60 2e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 5e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 6e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 6e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 57 1e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 57 2e-08
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 56 3e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 56 3e-08
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 3e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 5e-08
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 55 8e-08
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 9e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 54 1e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 1e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 3e-07
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 4e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 8e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 8e-07
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 51 1e-06
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 3e-06
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 3e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 3e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 49 6e-06
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 49 6e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 7e-06
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 8e-06
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 357 bits (916), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 164/288 (56%), Positives = 216/288 (75%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+NGYVQFNRFDEA+ LF MQ G++PD F++V+LLTGCAQ+GALE G+WIH Y+ ENR
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENR 309
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VD VVGTAL++MYAK GC+E +LEVF +KE+DTASWTS+I GLAMNG + +AL+L+
Sbjct: 310 VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
ME +G + D +TF+ VL+AC+H G V EGRK+FHSM+ +++++P EH C IDLL RA
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRA 429
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL EAEEL+ K+ ++DE +VP+Y +LLSA R YGN+ + ER+A L
Sbjct: 430 GLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHT 489
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVG 288
+YASA+RWEDV VR KMKDLGI+K PG SSI+++G G+ VG
Sbjct: 490 LLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVG 537
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 113/228 (49%), Gaps = 34/228 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+ YV RF++AI +F M Q +K D+ +V+ L+ C+ LE G I+ +V+
Sbjct: 118 LISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-T 176
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLA------------ 107
+ +G AL++M+ K GC++K+ VF+ +++K+ WTS++ G
Sbjct: 177 EFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 108 --------------MNG-----KTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVE 148
MNG + ++ALELF M+ G +PD+ +++L+ C+ G +E
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
+G K H ++ + + +D+ + G + A E+ ++ ++
Sbjct: 297 QG-KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER 343
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 111/220 (50%), Gaps = 7/220 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ F + +ALFG+++ +G+ PD F + +L + + G +H Y ++
Sbjct: 17 MLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAG 76
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D+ V +L+ MYA G +E + +VF+ + ++D SW +I NG+ A+ +F+
Sbjct: 77 LEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFK 136
Query: 121 AM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M ++ K D+ T ++ LSACS +E G +++ + +++ + + + +D+ +
Sbjct: 137 RMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCK 194
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
G L +A + + D+ V + +++ + G ID
Sbjct: 195 CGCLDKARAVFDSMRDKN----VKCWTSMVFGYVSTGRID 230
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/292 (43%), Positives = 186/292 (63%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GYVQ + EA+ LF +MQ V+PD + L+ CAQ GALE G+WIH Y+ + R
Sbjct: 218 MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I +D+V+G LI+MYAK G +E++LEVF +K+K +WT++I G A +G +A+ F
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFM 337
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+K+G KP+ +TF VL+ACS+ GLVEEG+ +F+SM Y++KP +EHYGC +DLLGRA
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRA 397
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL EA+ + ++P + + +I +GALL ACR + NI++GE + L
Sbjct: 398 GLLDEAKRFIQEMPLKPNAVI---WGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYV 454
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
I+A +W+ + R MK+ G+ KVPG S+I LEG + G SH
Sbjct: 455 HKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSH 506
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
F+E + + G + D + V +L+ A +G + + D + E D V +
Sbjct: 131 FEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEP----DDVSWNS 186
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
+I+ Y K+G ++ +L +F + EK+ SWT++I G +AL+LF M+ +PD
Sbjct: 187 VIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPD 246
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC-FIDLLGRAGLLHEAEEL 189
+V+ LSAC+ G +E+G K HS +K I+ + GC ID+ + G + EA E+
Sbjct: 247 NVSLANALSACAQLGALEQG-KWIHSYLNKTRIRMD-SVLGCVLIDMYAKCGEMEEALEV 304
Query: 190 VMKLPDQTDEIIVPLYGALLSACRTYGN 217
+ ++ V + AL+S +G+
Sbjct: 305 FKNIKKKS----VQAWTALISGYAYHGH 328
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 121/292 (41%), Positives = 190/292 (65%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY++ F+E++ +F +MQ G+ PD+F +V++LT CA G+LE G WI Y+ +N+
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK 398
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I D VVG ALI+MY K GC EK+ +VF+ + ++D +WT+++ GLA NG+ +A+++F
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFF 458
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ + +PDD+T++ VLSAC+H+G+V++ RK F M S + I+P+L HYGC +D+LGRA
Sbjct: 459 QMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRA 518
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GL+ EA E++ K+P + I+ +GALL A R + + M E A +
Sbjct: 519 GLVKEAYEILRKMPMNPNSIV---WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYA 575
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IYA RW+D+ +VR K+ D+ IKK PG+S I++ G+ + G SH
Sbjct: 576 LLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSH 627
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 33/231 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + ++E+I L +M+ V P ++ +L+ C++ + + +H+YV E +
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKT-------- 112
+ AL+ YA G ++ ++ +F +K +D SWTSI+ G G
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 113 -----------------------NKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
N++LE+F M+ G PD+ T ++VL+AC+H G +E
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEI 200
G + + K IK ++ ID+ + G +A+++ + DQ D+
Sbjct: 387 G-EWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM-DQRDKF 435
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSG-ALEHGRWIHDYVIEN 59
MI G+ + + E + L+ +M GV PD LL G + G AL G+ +H +V++
Sbjct: 105 MIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKF 164
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ + V AL++MY+ G ++ + VF+ ++D SW +I G + +++EL
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
ME+ P VT + VLSACS + +++ H S+ +P+L ++
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRV-HEYVSECKTEPSLRLENALVNAYAA 283
Query: 180 AG 181
G
Sbjct: 284 CG 285
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 245 bits (625), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 126/280 (45%), Positives = 181/280 (64%), Gaps = 6/280 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVR-GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+G V R EAI LF MQ G+KPD I+ ++L+ CA GA++HGRW+H+Y++
Sbjct: 276 MISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA 335
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I DT +GTA+++MYAK G +E +LE+FNG++ K+ +W +++ GLA++G ++L F
Sbjct: 336 GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYF 395
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK-YHIKPNLEHYGCFIDLLG 178
E M KLG KP+ VTF+ L+AC H GLV+EGR+ FH M S+ Y++ P LEHYGC IDLL
Sbjct: 396 EEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLC 455
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNI-DMGERLATTLXXXXXXXXX 237
RAGLL EA ELV +P + D V + GA+LSAC+ G + ++ + + +
Sbjct: 456 RAGLLDEALELVKAMPVKPD---VRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSG 512
Query: 238 XXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
I+A+ RW+DV ++R MK GI KVPG S I+
Sbjct: 513 VYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 95/190 (50%), Gaps = 5/190 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G+ + + EA+ F M V +P+ V +L + G L G+ IH +++
Sbjct: 178 IITGFTRTGLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA 234
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ G ALI+MY K + ++ VF L++KD SW S+I GL ++ +A++LF
Sbjct: 235 SLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFS 294
Query: 121 AME-KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M+ G KPD +VLSAC+ G V+ GR + H IK + +D+ +
Sbjct: 295 LMQTSSGIKPDGHILTSVLSACASLGAVDHGRWV-HEYILTAGIKWDTHIGTAIVDMYAK 353
Query: 180 AGLLHEAEEL 189
G + A E+
Sbjct: 354 CGYIETALEI 363
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 92/227 (40%), Gaps = 4/227 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ Y ++ I + G PD F + C + + G+ IH V +
Sbjct: 77 LLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMG 136
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V +L+ Y G + +VF + +D SWT II G G +AL+ F
Sbjct: 137 FYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFS 196
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ +P+ T++ VL + G + G+ + H + K +LE ID+ +
Sbjct: 197 KMD---VEPNLATYVCVLVSSGRVGCLSLGKGI-HGLILKRASLISLETGNALIDMYVKC 252
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATT 227
L +A + +L + + L+ R+ ID+ + T+
Sbjct: 253 EQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTS 299
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 240 bits (613), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 120/288 (41%), Positives = 184/288 (63%), Gaps = 3/288 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MINGY + N F++AI LF M+ GV ++ ++V++++ CA GALE G ++YV+++
Sbjct: 220 MINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH 279
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V+ ++GTAL++M+ + G +EK++ VF GL E D+ SW+SII GLA++G +KA+ F
Sbjct: 280 MTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFS 339
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M LG P DVTF VLSACSH GLVE+G +++ +M + I+P LEHYGC +D+LGRA
Sbjct: 340 QMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRA 399
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EAE ++K+ + + P+ GALL AC+ Y N ++ ER+ L
Sbjct: 400 GKLAEAENFILKMHVKPN---APILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYV 456
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVG 288
IYA A +W+ + +R MK+ +KK PG+S I+++G N +G
Sbjct: 457 LLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMG 504
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 123
D V T+++ Y K G VE + E+F+ + ++ +W+ +I G A N KA++LFE M+
Sbjct: 182 DVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMK 241
Query: 124 KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLL 183
+ G ++ ++V+S+C+H G +E G + + + K H+ NL +D+ R G +
Sbjct: 242 REGVVANETVMVSVISSCAHLGALEFGERAYEYV-VKSHMTVNLILGTALVDMFWRCGDI 300
Query: 184 HEAEELVMKLPDQTDEI 200
+A + LP +TD +
Sbjct: 301 EKAIHVFEGLP-ETDSL 316
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 169/280 (60%), Gaps = 4/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MING+V+ +EA+ F +MQ+ GVKPD ++A L C GAL G W+H YV+
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD 236
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +LI++Y + GCVE + +VF ++++ SW S+I G A NG +++L F
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFR 296
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ G KPD VTF L+ACSH GLVEEG + F M Y I P +EHYGC +DL RA
Sbjct: 297 KMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRA 356
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG-NIDMGERLATTLXXXXXXXXXXX 239
G L +A +LV +P + +E+++ G+LL+AC +G NI + ERL L
Sbjct: 357 GRLEDALKLVQSMPMKPNEVVI---GSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNY 413
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
+YA+ +WE +K+R KMK LG+KK PG+SSI+++
Sbjct: 414 VILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 35/230 (15%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQ--SGALEHGRWIHDYVIE- 58
IN + R EA F DM + GV+P+ +ALL+GC SG+ G +H Y +
Sbjct: 43 INLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKL 102
Query: 59 ----NRIMV---------------------------DTVVGTALIEMYAKSGCVEKSLEV 87
N +MV ++V +I+ Y +SG V+ + ++
Sbjct: 103 GLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKM 162
Query: 88 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLV 147
F+ + E+D SWT++I G G +AL F M+ G KPD V I L+AC++ G +
Sbjct: 163 FDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGAL 222
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
G + + S+ K N+ IDL R G + A ++ + +T
Sbjct: 223 SFGLWVHRYVLSQ-DFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/296 (39%), Positives = 186/296 (62%), Gaps = 3/296 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY F +A+ +F +M+ ++P+ +V++L ++ G+LE G W+H Y ++
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I +D V+G+ALI+MY+K G +EK++ VF L ++ +W+++I G A++G+ A++ F
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G +P DV +I +L+ACSH GLVEEGR+ F M S ++P +EHYGC +DLLGR+
Sbjct: 365 KMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRS 424
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL EAEE ++ +P + D++I + ALL ACR GN++MG+R+A L
Sbjct: 425 GLLDEAEEFILNMPIKPDDVI---WKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYV 481
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
+YAS W +V+++R +MK+ I+K PG S ID++G + V SH K
Sbjct: 482 ALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAK 537
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 47/230 (20%)
Query: 14 AIALFGDMQV-RGVKPDKFIVVALLTGCAQSGALEHGRWIH-----------DYVIENRI 61
AI LF +M V+P++F ++L CA++G ++ G+ IH ++V+ N +
Sbjct: 111 AITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLV 170
Query: 62 MV---------------------DTVVGT-------------ALIEMYAKSGCVEKSLEV 87
+ D VV T +I+ Y + G + + +
Sbjct: 171 RMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARML 230
Query: 88 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLV 147
F+ ++++ SW ++I G ++NG A+E+F M+K +P+ VT ++VL A S G +
Sbjct: 231 FDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSL 290
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
E G L H + I+ + ID+ + G++ +A + +LP +
Sbjct: 291 ELGEWL-HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 52 IHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLE----VFNGLKEKDTASWTSIICGLA 107
IH I++ M DT+ ++ A S + L+ +FN + +++ SW +II G +
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFS 101
Query: 108 MNGKTNK--ALELF-EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKY 161
+ + A+ LF E M +P+ TF +VL AC+ G ++EG+++ H ++ KY
Sbjct: 102 ESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQI-HGLALKY 157
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/280 (39%), Positives = 176/280 (62%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G VQ R +A+ALF +MQ KPD+ ++ L+ C+Q GAL+ G WIH Y+ +
Sbjct: 360 MIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ++ +GT+L++MYAK G + ++L VF+G++ +++ ++T+II GLA++G + A+ F
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G PD++TFI +LSAC H G+++ GR F M S++++ P L+HY +DLLGRA
Sbjct: 480 EMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL EA+ L+ +P + D + +GALL CR +GN+++GE+ A L
Sbjct: 540 GLLEEADRLMESMPMEADAAV---WGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYV 596
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+Y A+ WED + R M + G++K+PG SSI++ G
Sbjct: 597 LLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNG 636
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 32/217 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+INGY + ++AI ++ M+ GVKPD ++ L++ C+ G L G+ ++YV EN
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNG---------- 110
+ + + AL++M++K G + ++ +F+ L+++ SWT++I G A G
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 111 ---------------------KTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
+ AL LF+ M+ KPD++T I LSACS G ++
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEA 186
G H KY + N+ +D+ + G + EA
Sbjct: 408 G-IWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEA 443
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 8/226 (3%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGV---KPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
I G+ + E+ L+ M G +PD F L CA G I +V++
Sbjct: 125 IRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLK 184
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
R+ + + V A I M+A G +E + +VF+ +D SW +I G G+ KA+ +
Sbjct: 185 LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
++ ME G KPDDVT I ++S+CS G + G++ F+ + ++ + +D+
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKE-FYEYVKENGLRMTIPLVNALMDMFS 303
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
+ G +HEA + L +T + + ++S G +D+ +L
Sbjct: 304 KCGDIHEARRIFDNLEKRT----IVSWTTMISGYARCGLLDVSRKL 345
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/279 (41%), Positives = 175/279 (62%), Gaps = 3/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G+V+ RF +A+ +F +MQ + VKPD F +V+LL CA GA E GRWIH+Y++ NR
Sbjct: 229 MISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNR 288
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++++V TALI+MY K GC+E+ L VF +K + W S+I GLA NG +A++LF
Sbjct: 289 FELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFS 348
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+E+ G +PD V+FI VL+AC+H+G V + F M KY I+P+++HY +++LG A
Sbjct: 349 ELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGA 408
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL EAE L+ +P + D +I + +LLSACR GN++M +R A L
Sbjct: 409 GLLEEAEALIKNMPVEEDTVI---WSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYV 465
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
YAS +E+ + R MK+ ++K G SSI+++
Sbjct: 466 LLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVD 504
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 97/218 (44%), Gaps = 34/218 (15%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG--VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
+I G+ + + + AI++F DM VKP + ++ + G GR +H VI+
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 59 NRIMVDTVVGTALIEMYAKSGC-------------------------------VEKSLEV 87
+ D+ + ++ MY GC ++++ +
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 88 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLV 147
F+ + +++ SW S+I G NG+ AL++F M++ KPD T +++L+AC++ G
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHE 185
E+GR + H + + N ID+ + G + E
Sbjct: 275 EQGRWI-HEYIVRNRFELNSIVVTALIDMYCKCGCIEE 311
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 182/292 (62%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G V+ ++A+ LF +MQ+ V ++F V +L+ C+ GALE GRW+H +V R
Sbjct: 226 MIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQR 285
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VG ALI MY++ G + ++ VF +++KD S+ ++I GLAM+G + +A+ F
Sbjct: 286 MELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFR 345
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G +P+ VT + +L+ACSH GL++ G ++F+SM ++++P +EHYGC +DLLGR
Sbjct: 346 DMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRV 405
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA + +P + D I++ G LLSAC+ +GN+++GE++A L
Sbjct: 406 GRLEEAYRFIENIPIEPDHIML---GTLLSACKIHGNMELGEKIAKRLFESENPDSGTYV 462
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
+YAS+ +W++ ++R M+D GI+K PG S+I+++ + VG +H
Sbjct: 463 LLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAH 514
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 40/247 (16%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGC-------------------- 40
MI+G+V R + ++L+ M V PD +++ ++L C
Sbjct: 98 MIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSS 157
Query: 41 -----------AQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFN 89
+SG L + + + D + + D V T +I Y++ G ++++LE+F
Sbjct: 158 RSVGLKMMEIYGKSGELVNAKKMFDEMPDR----DHVAATVMINCYSECGFIKEALELFQ 213
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
+K KDT WT++I GL N + NKALELF M+ ++ T + VLSACS G +E
Sbjct: 214 DVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALEL 273
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
GR + HS ++ + I++ R G ++EA + + D+ V Y ++
Sbjct: 274 GRWV-HSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD----VISYNTMI 328
Query: 210 SACRTYG 216
S +G
Sbjct: 329 SGLAMHG 335
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 229 bits (585), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 178/280 (63%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY + R EAI +F M + V+PD+ ++A+L+ CA G+LE G I YV
Sbjct: 221 VISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG 280
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + A+I+MYAKSG + K+L+VF + E++ +WT+II GLA +G +AL +F
Sbjct: 281 MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFN 340
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M K G +P+DVTFI +LSACSH G V+ G++LF+SM SKY I PN+EHYGC IDLLGRA
Sbjct: 341 RMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRA 400
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA+E++ +P + + I +G+LL+A + ++++GER + L
Sbjct: 401 GKLREADEVIKSMPFKANAAI---WGSLLAASNVHHDLELGERALSELIKLEPNNSGNYM 457
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+Y++ RW++ +R+ MK +G+KK+ G SSI++E
Sbjct: 458 LLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVEN 497
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 115/281 (40%), Gaps = 69/281 (24%)
Query: 14 AIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIE 73
AI ++ + KPD F +L + + GR IH V+ V T LI+
Sbjct: 100 AITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQ 159
Query: 74 MYAKSGCVEKSLEVFNGLKEKDT---------------------------------ASWT 100
MY G + + ++F+ + KD SWT
Sbjct: 160 MYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWT 219
Query: 101 SIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRK-------- 152
+I G A +G+ ++A+E+F+ M +PD+VT + VLSAC+ G +E G +
Sbjct: 220 CVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHR 279
Query: 153 -------LFHSMSSKY----HIKPNLEHYGCFID---------LLGRAGLLHEAEELVM- 191
L +++ Y +I L+ + C + + G A H AE L M
Sbjct: 280 GMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMF 339
Query: 192 ----KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
K + +++ + A+LSAC G +D+G+RL ++
Sbjct: 340 NRMVKAGVRPNDVT---FIAILSACSHVGWVDLGKRLFNSM 377
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 123/298 (41%), Positives = 177/298 (59%), Gaps = 5/298 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GY Q ++A+ LF + G KPD+ VVA L+ C+Q GALE GRWIH +V +
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
RI ++ V T LI+MY+K G +E+++ VFN KD +W ++I G AM+G + AL LF
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 120 EAMEKL-GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
M+ + G +P D+TFI L AC+HAGLV EG ++F SM +Y IKP +EHYGC + LLG
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG L A E + + D + L+ ++L +C+ +G+ +G+ +A L
Sbjct: 409 RAGQLKRAYETIKNMNMDADSV---LWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGI 465
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
IYAS +E V KVR+ MK+ GI K PG S+I++E + G HS +K
Sbjct: 466 YVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSK 523
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 37/207 (17%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
D+A L+ + + P++F +LL C+ G+ IH +V++ + +D V T L
Sbjct: 112 DQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGL 167
Query: 72 IEM-------------------------------YAKSGCVEKSLEVFNGLKEKDTASWT 100
+++ YAK G VE + +F+ + E+D SW
Sbjct: 168 VDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWN 227
Query: 101 SIICGLAMNGKTNKALELFEAMEKLG-AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSS 159
+I G A +G N AL LF+ + G KPD++T + LSACS G +E GR H
Sbjct: 228 VMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR-WIHVFVK 286
Query: 160 KYHIKPNLEHYGCFIDLLGRAGLLHEA 186
I+ N++ ID+ + G L EA
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEA 313
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 225 bits (574), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 178/283 (62%), Gaps = 7/283 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY N + EA+ LF +M G P+ ++++L CA GA++ GRWIH Y I+ R
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVY-IDKR 396
Query: 61 ---IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ + + T+LI+MYAK G +E + +VFN + K +SW ++I G AM+G+ + + +
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
LF M K+G +PDD+TF+ +LSACSH+G+++ GR +F +M+ Y + P LEHYGC IDLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXX 237
G +GL EAEE++ + + D +I + +LL AC+ +GN+++GE A L
Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVI---WCSLLKACKMHGNVELGESFAENLIKIEPENPG 573
Query: 238 XXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
IYASA RW +V K R+ + D G+KKVPG SSI+++
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDS 616
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 92/151 (60%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + + EA+ LF DM V+PD+ +V +++ CAQSG++E GR +H ++ ++
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + ALI++Y+K G +E + +F L KD SW ++I G +AL LF+
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGR 151
M + G P+DVT +++L AC+H G ++ GR
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 105/225 (46%), Gaps = 32/225 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M G+ + A+ L+ M G+ P+ + +L CA+S A + G+ IH +V++
Sbjct: 105 MFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLG 164
Query: 61 IMVDTVVGTALIEMY-------------------------------AKSGCVEKSLEVFN 89
+D V T+LI MY A G +E + ++F+
Sbjct: 165 CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD 224
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
+ KD SW ++I G A G +ALELF+ M K +PD+ T +TV+SAC+ +G +E
Sbjct: 225 EIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIEL 284
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLP 194
GR++ H + NL+ IDL + G L A L +LP
Sbjct: 285 GRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLP 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 11/194 (5%)
Query: 34 VALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVE---KSLEVFNG 90
++LL C L+ R IH +I+ + + LIE S E ++ VF
Sbjct: 37 LSLLHNCK---TLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKT 93
Query: 91 LKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEG 150
++E + W ++ G A++ AL+L+ M LG P+ TF VL +C+ + +EG
Sbjct: 94 IQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 151 RKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
+++ H K +L + I + + G L +A ++ K P + V Y AL+
Sbjct: 154 QQI-HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD----VVSYTALIK 208
Query: 211 ACRTYGNIDMGERL 224
+ G I+ ++L
Sbjct: 209 GYASRGYIENAQKL 222
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 177/292 (60%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY Q EA+ +F MQ+ GVK + ++++L+ C Q GAL+ GRW H Y+ N+
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNK 270
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I + + T L+++YAK G +EK++EVF G++EK+ +W+S + GLAMNG K LELF
Sbjct: 271 IKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFS 330
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ G P+ VTF++VL CS G V+EG++ F SM +++ I+P LEHYGC +DL RA
Sbjct: 331 LMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARA 390
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +A ++ ++P + + + +LL A R Y N+++G + +
Sbjct: 391 GRLEDAVSIIQQMPMKPHAAV---WSSLLHASRMYKNLELGVLASKKMLELETANHGAYV 447
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IYA ++ W++V+ VR MK G++K PG S +++ G + VG SH
Sbjct: 448 LLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSH 499
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 32/195 (16%)
Query: 26 VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSL 85
+KPD + V L+ C E G +H I D V T LI +YA+ GC++
Sbjct: 104 LKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCH 163
Query: 86 EVFN-------------------------------GLKEKDTASWTSIICGLAMNGKTNK 114
+VFN G+ E+D +W ++I G A G++ +
Sbjct: 164 KVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESRE 223
Query: 115 ALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFI 174
AL +F M+ G K + V I+VLSAC+ G +++GR HS + IK + +
Sbjct: 224 ALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGR-WAHSYIERNKIKITVRLATTLV 282
Query: 175 DLLGRAGLLHEAEEL 189
DL + G + +A E+
Sbjct: 283 DLYAKCGDMEKAMEV 297
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 185/299 (61%), Gaps = 8/299 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQV-RGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+ Y Q + +EA+ +F ++Q+ + +K ++ +V+ L+ CAQ GALE GRWIH Y+ ++
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I ++ V +ALI MY+K G +EKS EVFN ++++D W+++I GLAM+G N+A+++F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M++ KP+ VTF V ACSH GLV+E LFH M S Y I P +HY C +D+LGR
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 180 AGLLHEAEELV--MKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXX 237
+G L +A + + M +P T ++GALL AC+ + N+++ E T L
Sbjct: 515 SGYLEKAVKFIEAMPIPPSTS-----VWGALLGACKIHANLNLAEMACTRLLELEPRNDG 569
Query: 238 XXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
IYA +WE+V+++R M+ G+KK PG SSI+++G + G +H +++
Sbjct: 570 AHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 628
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 33/221 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MING+VQ D+A+ LF M+ VK +V +L+ CA+ LE GR + Y+ ENR
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAM------------ 108
+ V+ + A+++MY K G +E + +F+ ++EKD +WT+++ G A+
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 109 -------------------NGKTNKALELFEAME-KLGAKPDDVTFITVLSACSHAGLVE 148
NGK N+AL +F ++ + K + +T ++ LSAC+ G +E
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
GR + HS K+ I+ N I + + G L ++ E+
Sbjct: 383 LGRWI-HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREV 422
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 28 PDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEV 87
P+K+ L+ A+ +L G+ +H +++ + D V +LI Y G ++ + +V
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 88 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLV 147
F +KEKD SW S+I G G +KALELF+ ME K VT + VLSAC+ +
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
E GR++ S + + NL +D+ + G + +A+ L
Sbjct: 249 EFGRQVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 224 bits (570), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 173/280 (61%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GYVQ FD+ + +F +M V P++ + ++L+ CA GAL GR +H Y+I+N
Sbjct: 277 LIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNS 336
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I ++T GT LI++Y K GC+E+++ VF L EK+ +WT++I G A +G A +LF
Sbjct: 337 IEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFY 396
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M P++VTF+ VLSAC+H GLVEEGR+LF SM +++++P +HY C +DL GR
Sbjct: 397 TMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRK 456
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL EA+ L+ ++P + ++ +GAL +C + + ++G+ A+ +
Sbjct: 457 GLLEEAKALIERMPMEPTNVV---WGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYT 513
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+Y+ + W++V +VR +MKD + K PG+S I+++G
Sbjct: 514 LLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKG 553
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 2/187 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN- 59
MI+G+V+ EA+ F +M+ GV ++ VV++L + + GR +H +E
Sbjct: 175 MIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG 234
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
R+ D +G++L++MY K C + + +VF+ + ++ +WT++I G + +K + +F
Sbjct: 235 RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVF 294
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
E M K P++ T +VLSAC+H G + GR++ H K I+ N IDL +
Sbjct: 295 EEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV-HCYMIKNSIEINTTAGTTLIDLYVK 353
Query: 180 AGLLHEA 186
G L EA
Sbjct: 354 CGCLEEA 360
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 93/198 (46%), Gaps = 8/198 (4%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQ---SGALEHGRWIHDYVIE 58
+G + NR +A + M+ GV P + LL + S + H ++++
Sbjct: 77 FSGGITLNRRLSFLA-YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ----FHAHIVK 131
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ D V +LI Y+ SG + + +F+G ++KD +WT++I G NG ++A+
Sbjct: 132 FGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVY 191
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M+K G +++T ++VL A V GR + +K ++ +D+ G
Sbjct: 192 FVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYG 251
Query: 179 RAGLLHEAEELVMKLPDQ 196
+ +A+++ ++P +
Sbjct: 252 KCSCYDDAQKVFDEMPSR 269
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 111/278 (39%), Positives = 166/278 (59%), Gaps = 2/278 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY Q N EAI LF +M G+KPD +V+ L+ CAQSG + G+ IHDY R
Sbjct: 220 LISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKR 279
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +D+ + T L++ YAK G ++ ++E+F +K +W ++I GLAM+G ++ F
Sbjct: 280 LFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFR 339
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G KPD VTFI+VL CSH+GLV+E R LF M S Y + ++HYGC DLLGRA
Sbjct: 340 KMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRA 399
Query: 181 GLLHEAEELVMKLP-DQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
GL+ EA E++ ++P D + + + LL CR +GNI++ E+ A +
Sbjct: 400 GLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVY 459
Query: 240 XXXXXIYASADRWEDVNKVRSKM-KDLGIKKVPGYSSI 276
+YA+A+RWE+V KVR + +D +KK G+S +
Sbjct: 460 KVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 5/154 (3%)
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 123
D V LI+ K+ + ++ E+F+ + +D SW S+I G A +A++LF+ M
Sbjct: 182 DVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV 241
Query: 124 KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLL 183
LG KPD+V ++ LSAC+ +G ++G+ + K + G +D + G +
Sbjct: 242 ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATG-LVDFYAKCGFI 300
Query: 184 HEAEELVMKLPDQTDEIIVPLYGALLSACRTYGN 217
A E+ D+T + + A+++ +GN
Sbjct: 301 DTAMEIFELCSDKT----LFTWNAMITGLAMHGN 330
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/294 (38%), Positives = 177/294 (60%), Gaps = 4/294 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY Q R+ EAIA+F M G+ PD+ + +++ CA G LE G+ +H Y ++N
Sbjct: 1003 MIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNG 1062
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++D +G+AL++MY+K G +E++L VF L +K+ W SII GLA +G +AL++F
Sbjct: 1063 FVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFA 1122
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
ME KP+ VTF++V +AC+HAGLV+EGR+++ SM Y I N+EHYG + L +A
Sbjct: 1123 KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKA 1182
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GL++EA EL+ + + + +I +GALL CR + N+ + E L
Sbjct: 1183 GLIYEALELIGNMEFEPNAVI---WGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYF 1239
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKV-PGYSSIDLEGYGNSGGVGAFSHS 293
+YA +RW DV ++R +M++LGI+K+ PG SSI ++ + SHS
Sbjct: 1240 LLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHS 1293
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ Y R EA +F +M R D +++ + ++ + + + E
Sbjct: 910 LIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEK- 964
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ LI Y G +E++ +FN + KD SWT++I G + N + +A+ +F
Sbjct: 965 ---NEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFY 1021
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL-FHSMSSKYHI---------------- 163
M + G PD+VT TV+SAC+H G++E G+++ +++ + + +
Sbjct: 1022 KMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCG 1081
Query: 164 -------------KPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
K NL + I+ L G EA ++ K+ ++ + + ++ +
Sbjct: 1082 SLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
Query: 211 ACRTYGNIDMGERLATTL 228
AC G +D G R+ ++
Sbjct: 1142 ACTHAGLVDEGRRIYRSM 1159
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 173/298 (58%), Gaps = 9/298 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGYV+ E + +F +M VRG++PD+F V LT CAQ GAL G+WIH++V + R
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 61 -IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I D VGTAL++MYAK GC+E ++EVF L ++ SW ++I G A G KA
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 120 EAMEKL-GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+ +E+ G KPD V + VL+AC+H G +EEGR + +M ++Y I P EHY C +DL+
Sbjct: 309 DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMC 368
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXX----XXX 234
RAG L +A +L+ K+P + + ++GALL+ CRT+ N+++GE L
Sbjct: 369 RAGRLDDALDLIEKMPMKP---LASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEE 425
Query: 235 XXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IY S R + KVR ++ GI+K PG+S ++++G G SH
Sbjct: 426 EEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSH 483
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 31 FIVVALLTGCAQSGALEHGRWIHDYVIENRIMV-DTVVGTALIEMYAKSGCVEKSLEVFN 89
F++VA L C S G+ IH +V++N + + D V T ++ +Y + + + +VF+
Sbjct: 121 FLIVACLKACFFSV----GKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFD 176
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
+ + D W ++ G G ++ LE+F+ M G +PD+ + T L+AC+ G + +
Sbjct: 177 EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQ 236
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
G+ + + K I+ ++ +D+ + G + A E+ KL + V + AL+
Sbjct: 237 GKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRN----VFSWAALI 292
Query: 210 SACRTYG 216
YG
Sbjct: 293 GGYAAYG 299
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 174/292 (59%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ YV+ + EA+ +F +M G+KPD + ++++ CA G L+ +W+H + N
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + + ALI MYAK G ++ + +VF + ++ SW+S+I L+M+G+ + AL LF
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ +P++VTF+ VL CSH+GLVEEG+K+F SM+ +Y+I P LEHYGC +DL GRA
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
LL EA E++ +P ++ +I +G+L+SACR +G +++G+ A +
Sbjct: 495 NLLREALEVIESMPVASNVVI---WGSLMSACRIHGELELGKFAAKRILELEPDHDGALV 551
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IYA RWEDV +R M++ + K G S ID G + +G H
Sbjct: 552 LMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRH 603
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 122/247 (49%), Gaps = 36/247 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y +F DEA LF +M+ V PD+ I+ +++ C ++G + + R I++++IEN
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLE-------------------------------VFN 89
+ +DT + TAL+ MYA +GC++ + E +F+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
++KD WT++I + +AL +FE M G KPD V+ +V+SAC++ G++++
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
K HS ++ L I++ + G L ++ K+P + V + +++
Sbjct: 363 A-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN----VVSWSSMI 417
Query: 210 SACRTYG 216
+A +G
Sbjct: 418 NALSMHG 424
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 80/180 (44%), Gaps = 1/180 (0%)
Query: 14 AIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIE 73
I + ++ G + D+F + +L ++ AL G +H + + D V T ++
Sbjct: 95 TILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMD 154
Query: 74 MYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVT 133
MYA G + + VF+ + +D +W ++I G ++A +LFE M+ PD++
Sbjct: 155 MYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMI 214
Query: 134 FITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKL 193
++SAC G + R ++ + ++ + + + AG + A E K+
Sbjct: 215 LCNIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAREFFRKM 273
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 180/293 (61%), Gaps = 4/293 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVR-GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+G VQ + F+EAI +F MQ + GV D ++++ + C GAL+ +WI+ Y+ +N
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I +D +GT L++M+++ G E ++ +FN L +D ++WT+ I +AM G +A+ELF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M + G KPD V F+ L+ACSH GLV++G+++F+SM + + P HYGC +DLLGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AGLL EA +L+ +P + +++I + +LL+ACR GN++M A +
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVI---WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 676
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
+YASA RW D+ KVR MK+ G++K PG SSI + G + G SH
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESH 729
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY +EAI LF M G+ PDK+ L+ CA+S A +G IH +++
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V +L+ YA+ G ++ + +VF+ + E++ SWTS+ICG A A++LF
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 121 AMEK-LGAKPDDVTFITVLSACSHAGLVEEGRKLF 154
M + P+ VT + V+SAC+ +E G K++
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 4/160 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M + YV+ EA+ +F M GV+PD+ +++ ++ C+Q + G+ H YV+ N
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ALI+MY K + + +F+ + K +W SI+ G NG+ + A E FE
Sbjct: 368 FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFE 427
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
M + + V++ T++S L EE ++F SM S+
Sbjct: 428 TM----PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG--VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
MI GY + + +A+ LF M VR V P+ +V +++ CA+ LE G ++ ++
Sbjct: 206 MICGYARRDFAKDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ I V+ ++ +AL++MY K ++ + +F+ + ++ G T +AL +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 119 FEAMEKLGAKPDDVTFITVLSACSH 143
F M G +PD ++ ++ +S+CS
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQ 349
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 173/298 (58%), Gaps = 9/298 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGYV+ E + +F +M V+G++PD+F V LT CAQ GAL G+WIH++V +
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 61 -IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I D VGTAL++MYAK GC+E ++EVF L ++ SW ++I G A G KA+
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 120 EAMEKL-GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
E +E+ G KPD V + VL+AC+H G +EEGR + +M ++Y I P EHY C +DL+
Sbjct: 309 ERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMC 368
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXX----XXX 234
RAG L +A L+ K+P + + ++GALL+ CRT+ N+++GE L
Sbjct: 369 RAGRLDDALNLIEKMPMKP---LASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEE 425
Query: 235 XXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IY S R + +KVR ++ G++K PG+S ++++G G SH
Sbjct: 426 EEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSH 483
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 92/187 (49%), Gaps = 9/187 (4%)
Query: 31 FIVVALLTGCAQSGALEHGRWIHDYVIENRIMV-DTVVGTALIEMYAKSGCVEKSLEVFN 89
F++VA L C S G+ IH +V++N + + D+ V T ++ +Y + + + +VF+
Sbjct: 121 FLIVACLKACFFSV----GKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFD 176
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
+ + D W ++ G G ++ LE+F M G +PD+ + T L+AC+ G + +
Sbjct: 177 EIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQ 236
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
G+ + + K I+ ++ +D+ + G + A E+ KL + V + AL+
Sbjct: 237 GKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRN----VFSWAALI 292
Query: 210 SACRTYG 216
YG
Sbjct: 293 GGYAAYG 299
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 180/293 (61%), Gaps = 4/293 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVR-GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+G VQ + F+EAI +F MQ + GV D ++++ + C GAL+ +WI+ Y+ +N
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I +D +GT L++M+++ G E ++ +FN L +D ++WT+ I +AM G +A+ELF
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M + G KPD V F+ L+ACSH GLV++G+++F+SM + + P HYGC +DLLGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AGLL EA +L+ +P + +++I + +LL+ACR GN++M A +
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVI---WNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSY 676
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
+YASA RW D+ KVR MK+ G++K PG SSI + G + G SH
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESH 729
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 1/155 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY +EAI LF M G+ PDK+ L+ CA+S A +G IH +++
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V +L+ YA+ G ++ + +VF+ + E++ SWTS+ICG A A++LF
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 121 AMEK-LGAKPDDVTFITVLSACSHAGLVEEGRKLF 154
M + P+ VT + V+SAC+ +E G K++
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVY 259
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 4/160 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M + YV+ EA+ +F M GV+PD+ +++ ++ C+Q + G+ H YV+ N
Sbjct: 308 MASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNG 367
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ALI+MY K + + +F+ + K +W SI+ G NG+ + A E FE
Sbjct: 368 FESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFE 427
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
M + + V++ T++S L EE ++F SM S+
Sbjct: 428 TM----PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 76/145 (52%), Gaps = 3/145 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG--VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
MI GY + + +A+ LF M VR V P+ +V +++ CA+ LE G ++ ++
Sbjct: 206 MICGYARRDFAKDAVDLFFRM-VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRN 264
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ I V+ ++ +AL++MY K ++ + +F+ + ++ G T +AL +
Sbjct: 265 SGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGV 324
Query: 119 FEAMEKLGAKPDDVTFITVLSACSH 143
F M G +PD ++ ++ +S+CS
Sbjct: 325 FNLMMDSGVRPDRISMLSAISSCSQ 349
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 218 bits (556), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/280 (38%), Positives = 173/280 (61%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY + NR +EA++LF +MQ + +KP++ ++++L+ CA G+L+ G+WIH Y ++
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V TALI+M+AK G ++ ++ +F ++ KDT +W+++I A +GK K++ +FE
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +PD++TF+ +L+ACSH G VEEGRK F M SK+ I P+++HYG +DLL RA
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +A E + KLP + L+ LL+AC ++ N+D+ E+++ +
Sbjct: 381 GNLEDAYEFIDKLPISPTPM---LWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYV 437
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+YA +WE V+ +R MKD KVPG SSI++
Sbjct: 438 ILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 1/193 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M GY +F E +LF ++ G+ PD + +LL CA + ALE GR +H ++
Sbjct: 100 MARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V LI MY + V+ + VF+ + E + ++I G A + N+AL LF
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ KP+++T ++VLS+C+ G ++ G K H + K+ ++ ID+ +
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 181 GLLHEAEELVMKL 193
G L +A + K+
Sbjct: 279 GSLDDAVSIFEKM 291
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 218 bits (554), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 111/276 (40%), Positives = 160/276 (57%), Gaps = 4/276 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI YV + ++AIALF M KP +V LL C +G+LE G+ IH Y+ E
Sbjct: 504 MIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETE 563
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ + ALI+MYAK G +EKS E+F+ +KD W +I G M+G A+ LF+
Sbjct: 564 HEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFD 623
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
ME+ KP TF+ +LSAC+HAGLVE+G+KLF M +Y +KPNL+HY C +DLL R+
Sbjct: 624 QMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRS 682
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EAE VM +P D +I +G LLS+C T+G +MG R+A
Sbjct: 683 GNLEEAESTVMSMPFSPDGVI---WGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYI 739
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
+Y++A +WE+ + R M++ G+ K G+S +
Sbjct: 740 MLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 37/257 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GY + + I LF +Q G++ D ++++ C+ GA+ G+ +H YV++
Sbjct: 404 MLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTS 463
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDT--ASWTSIICGLAMNGKTNKALEL 118
+ + V +LI++Y K G + + +F E DT +W ++I ++ KA+ L
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMFC---EADTNVITWNAMIASYVHCEQSEKAIAL 520
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F+ M KP +T +T+L AC + G +E G+ + ++ H + NL ID+
Sbjct: 521 FDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH-EMNLSLSAALIDMYA 579
Query: 179 RAGLLHEAEEL---------------------------VMKLPDQTDEIIV----PLYGA 207
+ G L ++ EL + L DQ +E V P + A
Sbjct: 580 KCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLA 639
Query: 208 LLSACRTYGNIDMGERL 224
LLSAC G ++ G++L
Sbjct: 640 LLSACTHAGLVEQGKKL 656
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 4/202 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGV---KPDKFIVVALLTGCAQSGALEHGRWIHDYVI 57
+I+G+VQ + + M G KP+ + C+ GAL+ GR +H + +
Sbjct: 198 IISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAV 257
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+N + V +++ Y+KSG ++ F L ++D SWTSII LA +G ++ +
Sbjct: 258 KNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFD 317
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
+F M+ G PD V +++ LV +G K FH ++ + + +
Sbjct: 318 MFWEMQNKGMHPDGVVISCLINELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLSMY 376
Query: 178 GRAGLLHEAEELVMKLPDQTDE 199
+ LL AE+L ++ ++ ++
Sbjct: 377 CKFELLSVAEKLFCRISEEGNK 398
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 87/173 (50%), Gaps = 2/173 (1%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
+E+ +F +MQ +G+ PD ++ L+ + + G+ H +VI + +D+ V +L
Sbjct: 313 EESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSL 372
Query: 72 IEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
+ MY K + + ++F + E+ + +W +++ G K +ELF ++ LG + D
Sbjct: 373 LSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLL 183
+ +V+S+CSH G V G+ L H K + + IDL G+ G L
Sbjct: 433 SASATSVISSCSHIGAVLLGKSL-HCYVVKTSLDLTISVVNSLIDLYGKMGDL 484
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I + + ++ F M + G PD F +++ CA+ G ++H V+++
Sbjct: 96 IIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG 155
Query: 61 -IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+T VG + + Y+K G ++ + VF+ + ++D +WT+II G NG++ L
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 120 EAMEKLGA---KPDDVTFITVLSACSHAGLVEEGRKL 153
M G+ KP+ T ACS+ G ++EGR L
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCL 252
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 29 DKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVF 88
D+ I V L C QS +LE R + +I + + V + LI YA G S VF
Sbjct: 26 DRHISVIL---CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVF 82
Query: 89 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACS-----H 143
+ + +D W SII NG ++L F +M G PD T V+SAC+ H
Sbjct: 83 HLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFH 142
Query: 144 AGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
G G L H + N F+ + G L +A + ++PD+
Sbjct: 143 VGTFVHGLVLKHGGFDR-----NTAVGASFVYFYSKCGFLQDACLVFDEMPDR 190
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 217 bits (553), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 167/278 (60%), Gaps = 3/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + EA+ F +MQ+ G++PD+ ++++L CAQ G+LE G+WIH Y
Sbjct: 212 MISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRG 271
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ T V ALIEMY+K G + +++++F ++ KD SW+++I G A +G + A+E F
Sbjct: 272 FLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFN 331
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ KP+ +TF+ +LSACSH G+ +EG + F M Y I+P +EHYGC ID+L RA
Sbjct: 332 EMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARA 391
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L A E+ +P + D I +G+LLS+CRT GN+D+ L
Sbjct: 392 GKLERAVEITKTMPMKPDSKI---WGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYV 448
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
IYA +WEDV+++R +++ +KK PG S I++
Sbjct: 449 LLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEV 486
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 33/221 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVK-PDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I Y + + + I ++ + + + PD+F + CA G+ G+ +H ++ +
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKA---- 115
V ALI+MY K + + +VF+ + E+D SW S++ G A G+ KA
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 116 ---------------------------LELFEAMEKLGAKPDDVTFITVLSACSHAGLVE 148
++ F M+ G +PD+++ I+VL +C+ G +E
Sbjct: 199 HLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLE 258
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
G K H + + I++ + G++ +A +L
Sbjct: 259 LG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/278 (38%), Positives = 165/278 (59%), Gaps = 2/278 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y+ + +A+ ++ M GVKPD ++L C+Q ALE G+ IH + E+R
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D ++ +AL++MY+K G +++ +FN + +KD SWT +I +G+ +AL F+
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+K G KPD VT + VLSAC HAGL++EG K F M SKY I+P +EHY C ID+LGRA
Sbjct: 501 EMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRA 560
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA E++ + P+ +D L L SAC + +G+R+A L
Sbjct: 561 GRLLEAYEIIQQTPETSDN--AELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYM 618
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
+YAS + W+ +VR KMK++G++K PG S I++
Sbjct: 619 VLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEM 656
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 107/210 (50%), Gaps = 4/210 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GYV + + M + G +P + + ++L C++S L HG++IH YVI +
Sbjct: 280 MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV 339
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D V +LI++Y K G + VF+ ++ SW +I G KA+E+++
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYD 399
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +G KPD VTF +VL ACS +E+G+++ S+S ++ + +D+ +
Sbjct: 400 QMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISES-RLETDELLLSALLDMYSKC 458
Query: 181 GLLHEAEELVMKLPDQ---TDEIIVPLYGA 207
G EA + +P + + +++ YG+
Sbjct: 459 GNEKEAFRIFNSIPKKDVVSWTVMISAYGS 488
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 102/198 (51%), Gaps = 2/198 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+++GY + + F + + +F + PD F ++ G GR IH V+++
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKS 136
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ D VV ++L+ MYAK E SL+VF+ + E+D ASW ++I +G+ KALELF
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
ME G +P+ V+ +SACS +E G+++ H K + + +D+ G+
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEI-HRKCVKKGFELDEYVNSALVDMYGK 255
Query: 180 AGLLHEAEELVMKLPDQT 197
L A E+ K+P ++
Sbjct: 256 CDCLEVAREVFQKMPRKS 273
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 5/217 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ + Q ++A+ LFG M+ G +P+ + ++ C++ LE G+ IH ++
Sbjct: 179 VISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+D V +AL++MY K C+E + EVF + K +W S+I G G + +E+
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILN 298
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G +P T ++L ACS + + G K H + + ++ IDL +
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVNCSLIDLYFKC 357
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGN 217
G + AE + K T + + + ++S+ + GN
Sbjct: 358 GEANLAETVFSK----TQKDVAESWNVMISSYISVGN 390
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 215 bits (548), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/295 (37%), Positives = 174/295 (58%), Gaps = 10/295 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-----VKPDKFIVVALLTGCAQSGALEHGRWIHDY 55
+INGYV ++ EA+ LF +MQ+ V+P++F + +L+ C + GALE G+W+H Y
Sbjct: 165 LINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAY 224
Query: 56 VIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGL-KEKDTASWTSIICGLAMNGKTNK 114
+ + + +D V+GTALI+MYAK G +E++ VFN L +KD +++++IC LAM G T++
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDE 284
Query: 115 ALELFEAMEKL-GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCF 173
+LF M P+ VTF+ +L AC H GL+ EG+ F M ++ I P+++HYGC
Sbjct: 285 CFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCM 344
Query: 174 IDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXX 233
+DL GR+GL+ EAE + +P + D +I +G+LLS R G+I E L
Sbjct: 345 VDLYGRSGLIKEAESFIASMPMEPDVLI---WGSLLSGSRMLGDIKTCEGALKRLIELDP 401
Query: 234 XXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVG 288
+YA RW +V +R +M+ GI KVPG S +++EG + VG
Sbjct: 402 MNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVG 456
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 13/200 (6%)
Query: 25 GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKS 84
G+ D F+ +LL + G L + + D + D +++ YAK+G ++ +
Sbjct: 92 GLDKDPFVRTSLLNMYSSCGDLRSAQRVFD----DSGSKDLPAWNSVVNAYAKAGLIDDA 147
Query: 85 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME-----KLGAKPDDVTFITVLS 139
++F+ + E++ SW+ +I G M GK +AL+LF M+ + +P++ T TVLS
Sbjct: 148 RKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLS 207
Query: 140 ACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDE 199
AC G +E+G K H+ KYH++ ++ ID+ + G L A+ + L + D
Sbjct: 208 ACGRLGALEQG-KWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD- 265
Query: 200 IIVPLYGALLSACRTYGNID 219
V Y A++ YG D
Sbjct: 266 --VKAYSAMICCLAMYGLTD 283
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 165/279 (59%), Gaps = 3/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G Q + EA+ LF +MQV GVKP+ + ++L C AL HGR H + +
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ + VG+ALI+MYAK G + S VFN + K+ W S++ G +M+GK + + +FE
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
++ + KPD ++F ++LSAC GL +EG K F MS +Y IKP LEHY C ++LLGRA
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRA 538
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA +L+ ++P + D + +GALL++CR N+D+ E A L
Sbjct: 539 GKLQEAYDLIKEMPFEPDSCV---WGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYV 595
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
IYA+ W +V+ +R+KM+ LG+KK PG S I ++
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVK 634
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++G+ + EA+ +F + G PD+ V ++L S L GR IH YVI+
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 61 IMVDTVVGTALIEMYAKS-------------------------------GCVEKSLEVFN 89
++ D V +A+I+MY KS G V+K+LE+F
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 90 GLKEK----DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAG 145
KE+ + SWTSII G A NGK +ALELF M+ G KP+ VT ++L AC +
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 146 LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
+ GR H + + H+ N+ ID+ + G ++ ++ + +P +
Sbjct: 403 ALGHGRST-HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 74/147 (50%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
F ++I +F M G+ PD ++ L CA+ A + G+ IH + + +D V +
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
+ MY + G + + +VF+ + +KD + ++++C A G + + + ME G + +
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEAN 216
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSM 157
V++ +LS + +G +E +F +
Sbjct: 217 IVSWNGILSGFNRSGYHKEAVVMFQKI 243
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 169/292 (57%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY Q EA+ LF M+ G + ++ + L+ CA ALE G+ +H +++
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
VG AL+ MY K G +E++ ++F + KD SW ++I G + +G AL FE
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+M++ G KPDD T + VLSACSH GLV++GR+ F++M+ Y + PN +HY C +DLLGRA
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL +A L+ +P + D I +G LL A R +GN ++ E A +
Sbjct: 560 GLLEDAHNLMKNMPFEPDAAI---WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYV 616
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
+YAS+ RW DV K+R +M+D G+KKVPGYS I+++ ++ VG H
Sbjct: 617 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFH 668
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 103/225 (45%), Gaps = 42/225 (18%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE-- 58
+I GY Q + DEA LF + V+ D F A+++G Q+ +E R + D + E
Sbjct: 256 IITGYAQSGKIDEARQLFDESPVQ----DVFTWTAMVSGYIQNRMVEEARELFDKMPERN 311
Query: 59 ----NRIMVDTVVG---------------------TALIEMYAKSGCVEKSLEVFNGLKE 93
N ++ V G +I YA+ G + ++ +F+ + +
Sbjct: 312 EVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPK 371
Query: 94 KDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+D SW ++I G + +G + +AL LF ME+ G + + +F + LS C+ +E G++L
Sbjct: 372 RDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQL 431
Query: 154 FHSMSSKYHIKPNLEHYGCFID-----LLGRAGLLHEAEELVMKL 193
+ +K E GCF+ + + G + EA +L ++
Sbjct: 432 HGRL-----VKGGYET-GCFVGNALLLMYCKCGSIEEANDLFKEM 470
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVV--ALLTGCAQSGALEHGRWIHDYVIE 58
MI+GY++ F+ A LF +M P++ +V ++ G ++ L R + + + E
Sbjct: 101 MISGYLRNGEFELARKLFDEM------PERDLVSWNVMIKGYVRNRNLGKARELFEIMPE 154
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
D ++ YA++GCV+ + VF+ + EK+ SW +++ N K +A L
Sbjct: 155 R----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACML 210
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F++ E V++ +L + E R+ F SM+ + ++ + I
Sbjct: 211 FKSRENWAL----VSWNCLLGGFVKKKKIVEARQFFDSMNVR-----DVVSWNTIITGYA 261
Query: 179 RAGLLHEAEELVMKLPDQ 196
++G + EA +L + P Q
Sbjct: 262 QSGKIDEARQLFDESPVQ 279
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 93/199 (46%), Gaps = 23/199 (11%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVA---LLTGCAQSGALEHGRWIHDYVI 57
+++ YVQ ++ +EA LF + + +V+ LL G + + R D +
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRE-------NWALVSWNCLLGGFVKKKKIVEARQFFDSMN 246
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ D V +I YA+SG ++++ ++F+ +D +WT+++ G N +A E
Sbjct: 247 ----VRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARE 302
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
LF+ M + ++V++ +L+ +E ++LF M + N+ + I
Sbjct: 303 LFDKM----PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR-----NVSTWNTMITGY 353
Query: 178 GRAGLLHEAEELVMKLPDQ 196
+ G + EA+ L K+P +
Sbjct: 354 AQCGKISEAKNLFDKMPKR 372
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 174/279 (62%), Gaps = 4/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ + + +EA+AL+ +M +G+KPD F +V+LL+ CA+ GAL G+ +H Y+I+
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + L+++YA+ G VE++ +F+ + +K++ SWTS+I GLA+NG +A+ELF+
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Query: 121 AMEKL-GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
ME G P ++TF+ +L ACSH G+V+EG + F M +Y I+P +EH+GC +DLL R
Sbjct: 313 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 372
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG + +A E + +P Q + +I + LL AC +G+ D+ E +
Sbjct: 373 AGQVKKAYEYIKSMPMQPNVVI---WRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 429
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
+YAS RW DV K+R +M G+KKVPG+S +++
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 468
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 2/199 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I GY + A +L+ +M+V G V+PD L+ + G IH VI +
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
V +L+ +YA G V + +VF+ + EKD +W S+I G A NGK +AL L+
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G KPD T +++LSAC+ G + G+++ H K + NL +DL R
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV-HVYMIKVGLTRNLHSSNVLLDLYAR 269
Query: 180 AGLLHEAEELVMKLPDQTD 198
G + EA+ L ++ D+
Sbjct: 270 CGRVEEAKTLFDEMVDKNS 288
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 174/279 (62%), Gaps = 4/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ + + +EA+AL+ +M +G+KPD F +V+LL+ CA+ GAL G+ +H Y+I+
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + L+++YA+ G VE++ +F+ + +K++ SWTS+I GLA+NG +A+ELF+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 121 AMEKL-GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
ME G P ++TF+ +L ACSH G+V+EG + F M +Y I+P +EH+GC +DLL R
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG + +A E + +P Q + +I + LL AC +G+ D+ E +
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVI---WRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDY 296
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
+YAS RW DV K+R +M G+KKVPG+S +++
Sbjct: 297 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 335
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 1/149 (0%)
Query: 49 GRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAM 108
G IH VI + V +L+ +YA G V + +VF+ + EKD +W S+I G A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 109 NGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLE 168
NGK +AL L+ M G KPD T +++LSAC+ G + G+++ H K + NL
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV-HVYMIKVGLTRNLH 125
Query: 169 HYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
+DL R G + EA+ L ++ D+
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKN 154
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 214 bits (545), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/302 (38%), Positives = 166/302 (54%), Gaps = 9/302 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q +EA++LF ++ V P + +L CA L G H +V+++
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416
Query: 61 IMV------DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNK 114
D VG +LI+MY K GCVE+ VF + E+D SW ++I G A NG N+
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476
Query: 115 ALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFI 174
ALELF M + G KPD +T I VLSAC HAG VEEGR F SM+ + + P +HY C +
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536
Query: 175 DLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXX 234
DLLGRAG L EA+ ++ ++P Q D +I +G+LL+AC+ + NI +G+ +A L
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSVI---WGSLLAACKVHRNITLGKYVAEKLLEVEPS 593
Query: 235 XXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSL 294
+YA +WEDV VR M+ G+ K PG S I ++G+ + V SH
Sbjct: 594 NSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPR 653
Query: 295 TK 296
K
Sbjct: 654 KK 655
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 105/194 (54%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++G+ Q +R +EA+ F M G +++ ++L+ C+ + G +H + ++
Sbjct: 123 MVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSP 182
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D +G+AL++MY+K G V + VF+ + +++ SW S+I NG +AL++F+
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQ 242
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + +PD+VT +V+SAC+ ++ G+++ + ++ ++ F+D+ +
Sbjct: 243 MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKC 302
Query: 181 GLLHEAEELVMKLP 194
+ EA + +P
Sbjct: 303 SRIKEARFIFDSMP 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
Query: 25 GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKS 84
G + FI L+ ++ G+LE GR + D + + I V T L ++ G ++++
Sbjct: 50 GFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL----GFLDEA 105
Query: 85 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHA 144
+F + E+D +W S++ G A + + +AL F M K G ++ +F +VLSACS
Sbjct: 106 DSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGL 165
Query: 145 GLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
+ +G ++ HS+ +K ++ +D+ + G +++A+ + ++ D+
Sbjct: 166 NDMNKGVQV-HSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 77/162 (47%), Gaps = 32/162 (19%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN-RIMVDTVVGTAL 71
EA+ +F M V+PD+ + ++++ CA A++ G+ +H V++N ++ D ++ A
Sbjct: 236 EALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAF 295
Query: 72 IEMYAKSGCVEKSLEVFNGLK-------------------------------EKDTASWT 100
++MYAK ++++ +F+ + E++ SW
Sbjct: 296 VDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWN 355
Query: 101 SIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACS 142
++I G NG+ +AL LF +++ P +F +L AC+
Sbjct: 356 ALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 214 bits (545), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 166/292 (56%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y++ EA+ L+ M+ G +PD + ++L C + AL G+ IH Y+ +
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ + ++ ALI+MYAK GC+EK+ +VF +K +D SWT++I +G+ A+ LF
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
++ G PD + F+T L+ACSHAGL+EEGR F M+ Y I P LEH C +DLLGRA
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G + EA + + + +E + +GALL ACR + + D+G A L
Sbjct: 460 GKVKEAYRFIQDMSMEPNERV---WGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYV 516
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IYA A RWE+V +R+ MK G+KK PG S++++ ++ VG SH
Sbjct: 517 LLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 101/226 (44%), Gaps = 7/226 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI YV + E + +FG M V+PD + +L C+ SG + GR IH +
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VG L+ MY K G + ++ V + + +D SW S++ G A N + + ALE+
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGL--VEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
ME + D T ++L A S+ V + +F M K +L + I +
Sbjct: 231 EMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKK-----SLVSWNVMIGVYM 285
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
+ + EA EL ++ E ++L AC + +G+++
Sbjct: 286 KNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKI 331
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 50 RWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMN 109
R +H +I + ++ +G L+ YA V + +VF+ + E++ +I N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 110 GKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEH 169
G + +++F M +PD TF VL ACS +G + GRK+ H ++K + L
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKI-HGSATKVGLSSTLFV 177
Query: 170 YGCFIDLLGRAGLLHEAE 187
+ + G+ G L EA
Sbjct: 178 GNGLVSMYGKCGFLSEAR 195
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/289 (40%), Positives = 174/289 (60%), Gaps = 7/289 (2%)
Query: 12 DEAIAL--FGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
+ AIAL F M V+ D F VV++L+ C Q G+LE G I+D + I + +V
Sbjct: 190 NSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVEN 249
Query: 70 ALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKP 129
A ++M+ K G E + +F +K+++ SW+++I G AMNG + +AL LF M+ G +P
Sbjct: 250 ARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRP 309
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSM--SSKYHIKPNLEHYGCFIDLLGRAGLLHEAE 187
+ VTF+ VLSACSHAGLV EG++ F M S+ +++P EHY C +DLLGR+GLL EA
Sbjct: 310 NYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAY 369
Query: 188 ELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYA 247
E + K+P + D ++GALL AC + ++ +G+++A L IYA
Sbjct: 370 EFIKKMPVEPD---TGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYA 426
Query: 248 SADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
+A +W+ V+KVRSKM+ LG KKV YSS++ EG + G SH +K
Sbjct: 427 AAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSK 475
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 76/154 (49%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ GYV+ E++ L+ M+ GV+PD+F ++ +Q G G +H +V++
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG 139
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+V T L+ MY K G + + +F ++ KD +W + + G + ALE F
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF 154
M + D T +++LSAC G +E G +++
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIY 233
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/293 (38%), Positives = 169/293 (57%), Gaps = 4/293 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + DEA+ALF M G KPD +++L++GC + G+LE G+WI
Sbjct: 328 MISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYG 387
Query: 61 IMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D V + ALI+MY+K G + ++ ++F+ EK +WT++I G A+NG +AL+LF
Sbjct: 388 CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLF 447
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M L KP+ +TF+ VL AC+H+G +E+G + FH M Y+I P L+HY C +DLLGR
Sbjct: 448 SKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGR 507
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G L EA EL+ + + D ++GALL+AC+ + N+ + E+ A +L
Sbjct: 508 KGKLEEALELIRNMSAKPD---AGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPY 564
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IYA+A W+ ++RS MK IKK PG S I + G +S VG H
Sbjct: 565 VEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGH 617
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 89/198 (44%), Gaps = 2/198 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M Y F +A L+ M KPD + L C L GR IH + I
Sbjct: 227 MFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLG 286
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D I MY+KS + +F+ + + SWT +I G A G ++AL LF
Sbjct: 287 TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFH 346
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIK-PNLEHYGCFIDLLGR 179
AM K G KPD VT ++++S C G +E G K + + Y K N+ ID+ +
Sbjct: 347 AMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSK 405
Query: 180 AGLLHEAEELVMKLPDQT 197
G +HEA ++ P++T
Sbjct: 406 CGSIHEARDIFDNTPEKT 423
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 9 NRFD--EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTV 66
NR D E++ LF +M+ G +P+ F + CA+ + +H ++I++ D
Sbjct: 29 NRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVF 88
Query: 67 VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLG 126
VGTA ++M+ K V+ + +VF + E+D +W +++ G +G T+KA LF M
Sbjct: 89 VGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNE 148
Query: 127 AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSS---KYHIKPNLEHYGCFIDLLGRAGLL 183
PD VT +T++ + S E+ KL +M + + + + +I G+ G L
Sbjct: 149 ITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDL 204
Query: 184 HEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
A +LV + D+ D +V + ++ A +G
Sbjct: 205 DSA-KLVFEAIDRGDRTVVS-WNSMFKAYSVFG 235
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++G+ Q D+A +LF +M++ + PD V+ L+ + +L+ +H I
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD--TASWTSIICGLAMNGKTNKALEL 118
+ V V I Y K G ++ + VF + D SW S+ ++ G+ A L
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+ M + KPD TFI + ++C + + +GR L HS + ++E FI +
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQGR-LIHSHAIHLGTDQDIEAINTFISMYS 302
Query: 179 RA 180
++
Sbjct: 303 KS 304
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/297 (38%), Positives = 176/297 (59%), Gaps = 3/297 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++G+ Q DEAI +F M+ G +PD V+LL+ CAQ+GA+ G W+H Y+I
Sbjct: 179 LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ++ +GTALI +Y++ G V K+ EVF+ +KE + A+WT++I +G +A+ELF
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 121 AME-KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
ME G P++VTF+ VLSAC+HAGLVEEGR ++ M+ Y + P +EH+ C +D+LGR
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGR 358
Query: 180 AGLLHEAEELVMKLPDQTDEIIVP-LYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
AG L EA + + +L D T + P L+ A+L AC+ + N D+G +A L
Sbjct: 359 AGFLDEAYKFIHQL-DATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGH 417
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLT 295
IYA + + ++V+ +R M ++K GYS I++E +G SH T
Sbjct: 418 HVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQET 474
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 107/202 (52%), Gaps = 5/202 (2%)
Query: 15 IALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEM 74
+A + M V P + +++ CA AL G+ +H + + + +DT V AL+
Sbjct: 92 VAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTF 151
Query: 75 YAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTF 134
Y+K G +E + +VF+ + EK +W S++ G NG ++A+++F M + G +PD TF
Sbjct: 152 YSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATF 211
Query: 135 ITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLP 194
+++LSAC+ G V G + + S+ + N++ I+L R G + +A E+
Sbjct: 212 VSLLSACAQTGAVSLGSWVHQYIISE-GLDLNVKLGTALINLYSRCGDVGKAREVF---- 266
Query: 195 DQTDEIIVPLYGALLSACRTYG 216
D+ E V + A++SA T+G
Sbjct: 267 DKMKETNVAAWTAMISAYGTHG 288
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 171/282 (60%), Gaps = 9/282 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE-- 58
MI+GYV EA+ +F +M+ G PD +++LL+ CA G LE G+ +H Y++E
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETA 305
Query: 59 ---NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKA 115
+ I V T + ALI+MYAK G +++++EVF G+K++D ++W ++I GLA++ +
Sbjct: 306 SVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGS 364
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
+E+FE M++L P++VTFI V+ ACSH+G V+EGRK F M Y+I+PN++HYGC +D
Sbjct: 365 IEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVD 424
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXX 235
+LGRAG L EA V + + + I+ + LL AC+ YGN+++G+ L
Sbjct: 425 MLGRAGQLEEAFMFVESMKIEPNAIV---WRTLLGACKIYGNVELGKYANEKLLSMRKDE 481
Query: 236 XXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
IYAS +W+ V KVR D +KK G S I+
Sbjct: 482 SGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 108/224 (48%), Gaps = 9/224 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ G Q + ++ ++L+ +M+ RGV PD++ +L C++ +G H V+ +
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+++ V ALI +A G + + E+F+ + +W+S+ G A GK ++A+ LF+
Sbjct: 143 FVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M D V + +++ C ++ R+LF + K ++ + I
Sbjct: 203 EM----PYKDQVAWNVMITGCLKCKEMDSARELFDRFTEK-----DVVTWNAMISGYVNC 253
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
G EA + ++ D + V +LLSAC G+++ G+RL
Sbjct: 254 GYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRL 297
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/278 (38%), Positives = 172/278 (61%), Gaps = 2/278 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY+Q D A+ +F M + G++ ++ + C+ +L GR H Y +++
Sbjct: 568 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 627
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D + +LI+MYAK+G + +S +VFNGLKEK TASW ++I G ++G +A++LFE
Sbjct: 628 LEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE 687
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ G PDD+TF+ VL+AC+H+GL+ EG + M S + +KPNL+HY C ID+LGRA
Sbjct: 688 EMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 747
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +A +V + + ++E V ++ +LLS+CR + N++MGE++A L
Sbjct: 748 GQLDKALRVVAE--EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYV 805
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
+YA +WEDV KVR +M ++ ++K G S I+L
Sbjct: 806 LLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G+ Q N ++ M++ G+ PD F V +LL+ C++ +L G+ +H ++I N
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D V +++ +Y G + +F+ +++K SW ++I G NG ++AL +F
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G + ++ + V ACS + GR+ H+ + K+ ++ + ID+ +
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREA-HAYALKHLLEDDAFIACSLIDMYAKN 645
Query: 181 GLLHEAEELVMKLPDQT 197
G + ++ ++ L +++
Sbjct: 646 GSITQSSKVFNGLKEKS 662
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 106/226 (46%), Gaps = 8/226 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+ Y + +DE + F +M + PD F ++ CA + G +H V++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
++ D VG AL+ Y G V +L++F+ + E++ SW S+I + NG + ++ L
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 120 -EAMEKLGA---KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
E ME+ G PD T +TVL C+ + G+ + H + K + L +D
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV-HGWAVKLRLDKELVLNNALMD 335
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIV-PLYGALLSACRTYGNIDM 220
+ + G + A +++ K+ + + + + G + T+G D+
Sbjct: 336 MYSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDV 380
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 87/192 (45%), Gaps = 7/192 (3%)
Query: 12 DEAIALFGDMQVR----GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVV 67
+E+ L G+M PD +V +L CA+ + G+ +H + ++ R+ + V+
Sbjct: 270 EESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVL 329
Query: 68 GTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLG- 126
AL++MY+K GC+ + +F K+ SW +++ G + G T+ ++ M G
Sbjct: 330 NNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGE 389
Query: 127 -AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHE 185
K D+VT + + C H + ++L H S K N F+ + G L
Sbjct: 390 DVKADEVTILNAVPVCFHESFLPSLKEL-HCYSLKQEFVYNELVANAFVASYAKCGSLSY 448
Query: 186 AEELVMKLPDQT 197
A+ + + +T
Sbjct: 449 AQRVFHGIRSKT 460
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 1/172 (0%)
Query: 26 VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSL 85
VK D+ ++ + C L + +H Y ++ + + +V A + YAK G + +
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQ 450
Query: 86 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAG 145
VF+G++ K SW ++I G A + +L+ M+ G PD T ++LSACS
Sbjct: 451 RVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLK 510
Query: 146 LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
+ G+++ H + ++ +L Y + L G L + L + D++
Sbjct: 511 SLRLGKEV-HGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKS 561
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 10/177 (5%)
Query: 29 DKFIVVA-----LLTGCAQSGALEHGRWIHDYVI-ENRIMVDTVVGTALIEMYAKSGCVE 82
D F++V LL + +E GR IH V R+ D V+ T +I MYA G +
Sbjct: 78 DAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPD 137
Query: 83 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF-EAMEKLGAKPDDVTFITVLSAC 141
S VF+ L+ K+ W ++I + N ++ LE F E + PD T+ V+ AC
Sbjct: 138 DSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKAC 197
Query: 142 SHAGLVEEGRKL-FHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
AG+ + G L H + K + ++ + G G + +A +L +P++
Sbjct: 198 --AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERN 252
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 211 bits (537), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 165/279 (59%), Gaps = 3/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY + EA L M G+K D V+++L C +SG L G IH + +
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSN 345
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V AL++MYAK G ++K+ +VFN + +KD SW +++ GL ++G +A+ELF
Sbjct: 346 LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G +PD VTFI VL +C+HAGL++EG F+SM Y + P +EHYGC +DLLGR
Sbjct: 406 RMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRV 465
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA ++V +P + + +I +GALL ACR + +D+ + + L
Sbjct: 466 GRLKEAIKVVQTMPMEPNVVI---WGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYS 522
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
IYA+A+ WE V +RSKMK +G++K G SS++LE
Sbjct: 523 LLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELE 561
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 114/258 (44%), Gaps = 34/258 (13%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I + Q ++ +A +F +MQ G+ D F LL C+ L + +H+++ +
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 61 IMVDTVVGTALIEMYAKSG--CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ D V ALI+ Y++ G V ++++F + E+DT SW S++ GL G+ A L
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRL 207
Query: 119 FEAM----------------------------EKLGAKPDDVTFITVLSACSHAGLVEEG 150
F+ M EK+ + + V++ T++ S AG +E
Sbjct: 208 FDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER-NTVSWSTMVMGYSKAGDMEMA 266
Query: 151 RKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
R +F M N+ + I GLL EA+ LV ++ + ++L+
Sbjct: 267 RVMFDKMPLPAK---NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 211 ACRTYGNIDMGERLATTL 228
AC G + +G R+ + L
Sbjct: 324 ACTESGLLSLGMRIHSIL 341
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ G V+ +A LF +M R D +L G A+ + + + + E
Sbjct: 191 MLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER- 245
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFN--GLKEKDTASWTSIICGLAMNGKTNKALEL 118
+TV + ++ Y+K+G +E + +F+ L K+ +WT II G A G +A L
Sbjct: 246 ---NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+ M G K D I++L+AC+ +GL+ G ++ HS+ + ++ N +D+
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRI-HSILKRSNLGSNAYVLNALLDMYA 361
Query: 179 RAGLLHEAEELVMKLPDQ 196
+ G L +A ++ +P +
Sbjct: 362 KCGNLKKAFDVFNDIPKK 379
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 158/264 (59%), Gaps = 4/264 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGV-KPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
M+ Y ++E + +F M KPD F +V++L+ CA G+L G W+H Y+ ++
Sbjct: 274 MVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKH 333
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I ++ + TAL++MY+K G ++K+LEVF ++D ++W SII L+++G ALE+F
Sbjct: 334 GIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIF 393
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G KP+ +TFI VLSAC+H G++++ RKLF MSS Y ++P +EHYGC +DLLGR
Sbjct: 394 SEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGR 453
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G + EAEELV ++P I++ +LL AC+ +G ++ ER+A L
Sbjct: 454 MGKIEEAEELVNEIPADEASILLE---SLLGACKRFGQLEQAERIANRLLELNLRDSSGY 510
Query: 240 XXXXXIYASADRWEDVNKVRSKMK 263
+YAS RWE V R M+
Sbjct: 511 AQMSNLYASDGRWEKVIDGRRNMR 534
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 110/227 (48%), Gaps = 18/227 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I Y + + A+ +F +M + V PDK+ +L CA E GR IH I++
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ D V L+ +Y +SG E + +V + + +D SW S++ G ++A LF+
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPN-----LEHYGCFID 175
ME+ + ++ ++S + AGLV+E +++F SM + + N H GC+ +
Sbjct: 231 EMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNE 286
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGE 222
+L E L D T++ ++LSAC + G++ GE
Sbjct: 287 VL---------EVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGE 324
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 172/296 (58%), Gaps = 3/296 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G+ Q R +A+ F M+ R VKPD F V+++T A+ H +WIH V+ +
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V TAL++MYAK G + + +F+ + E+ +W ++I G +G ALELFE
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 528
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+K KP+ VTF++V+SACSH+GLVE G K F+ M Y I+ +++HYG +DLLGRA
Sbjct: 529 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 588
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L+EA + +M++P + V +YGA+L AC+ + N++ E+ A L
Sbjct: 589 GRLNEAWDFIMQMPVKP---AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHV 645
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
IY +A WE V +VR M G++K PG S ++++ +S G+ +H +K
Sbjct: 646 LLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSK 701
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 5/216 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ YVQ EA+ +F M GVKP V+ L CA G LE GR+IH +E
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V +LI MY K V+ + +F L+ + SW ++I G A NG+ AL F
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M KPD T+++V++A + + K H + + + N+ +D+ +
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHA-KWIHGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
G + A + D E V + A++ T+G
Sbjct: 487 GAIMIARLIF----DMMSERHVTTWNAMIDGYGTHG 518
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ G+ + + D+A+ F M+ V+P + LL C L G+ IH ++++
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+D T L MYAK V ++ +VF+ + E+D SW +I+ G + NG ALE+ +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF-HSMSSKYHIKPNLEHYGCFIDLLGR 179
+M + KP +T ++VL A S L+ G+++ ++M S + N+ +D+ +
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS--TALVDMYAK 283
Query: 180 AGLLHEAEEL 189
G L A +L
Sbjct: 284 CGSLETARQL 293
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 1/197 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ GY Q A+ + M +KP +V++L + + G+ IH Y + +
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ TAL++MYAK G +E + ++F+G+ E++ SW S+I N +A+ +F+
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G KP DV+ + L AC+ G +E GR H +S + + N+ I + +
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERGR-FIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 181 GLLHEAEELVMKLPDQT 197
+ A + KL +T
Sbjct: 386 KEVDTAASMFGKLQSRT 402
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 170/281 (60%), Gaps = 4/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+++ Y Q +EA +F + + + V + + +L + SGAL G+ IHD VI
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ D +VGT++I+MY K G VE + + F+ +K K+ SWT++I G M+G KALELF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
AM G +P+ +TF++VL+ACSHAGL EG + F++M ++ ++P LEHYGC +DLLGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG L +A +L+ ++ + D II + +LL+ACR + N+++ E L
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSII---WSSLLAACRIHKNVELAEISVARLFELDSSNCGYY 493
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
IYA A RW+DV +VR MK+ G+ K PG+S ++L G
Sbjct: 494 MLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNG 534
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 99/206 (48%), Gaps = 10/206 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFI------VVALLTGCAQSGALEHGRWIHD 54
MI GY +A++LF D+ V D + +V++++ C++ A IH
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 55 YVIENRIMVDTVVGTALIEMYAK--SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKT 112
+VI+ VG L++ YAK G V + ++F+ + +KD S+ SI+ A +G +
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 113 NKALELFEAMEKLGAKP-DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYG 171
N+A E+F + K + +T TVL A SH+G + G K H + ++ ++
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIHDQVIRMGLEDDVIVGT 326
Query: 172 CFIDLLGRAGLLHEAEELVMKLPDQT 197
ID+ + G + A + ++ ++
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKN 352
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
EA+ F M+ + P + + C+ + G+ H D V +ALI
Sbjct: 59 EALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALI 118
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
MY+ G +E + +VF+ + +++ SWTS+I G +NG A+ LF+ + DD
Sbjct: 119 VMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDA 178
Query: 133 TF------ITVLSACSHA---GLVE 148
F ++V+SACS GL E
Sbjct: 179 MFLDSMGLVSVISACSRVPAKGLTE 203
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 162/280 (57%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GYV+ +R ++ + LF M G++P+ + + L GC++ AL+ GR IH V ++
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKST 314
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D T+LI MY K G + + ++F +K+KD +W ++I G A +G +KAL LF
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFR 374
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +PD +TF+ VL AC+HAGLV G F SM Y ++P +HY C +DLLGRA
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRA 434
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA +L+ +P + + +G LL ACR + N+++ E A L
Sbjct: 435 GKLEEALKLIRSMPFRPHAAV---FGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYV 491
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
IYAS +RWEDV +VR +MK+ + KVPGYS I++
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRN 531
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY + ++A LF M ++ ++ A+++G + G LE + +
Sbjct: 161 MITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDLEKA----SHFFKVA 212
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELF 119
+ V TA+I Y K+ VE + +F + K+ +W ++I G N + L+LF
Sbjct: 213 PVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
AM + G +P+ + L CS ++ GR++ H + SK + ++ I + +
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQI-HQIVSKSTLCNDVTALTSLISMYCK 331
Query: 180 AGLLHEAEEL--VMKLPDQTDEIIVPLYGALLSACRTYGNID 219
G L +A +L VMK D V + A++S +GN D
Sbjct: 332 CGELGDAWKLFEVMKKKD------VVAWNAMISGYAQHGNAD 367
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/293 (39%), Positives = 169/293 (57%), Gaps = 4/293 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY Q + EAI LF M G +P+ + + A+L+ + +L HG+ IH +++
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELF 119
+ V ALI MYAK+G + + F+ ++ E+DT SWTS+I LA +G +ALELF
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
E M G +PD +T++ V SAC+HAGLV +GR+ F M I P L HY C +DL GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AGLL EA+E + K+P + D V +G+LLSACR + NID+G+ A L
Sbjct: 564 AGLLQEAQEFIEKMPIEPD---VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAY 620
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
+Y++ +WE+ K+R MKD +KK G+S I+++ + GV +H
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTH 673
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 37/261 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY ++ +AI + GDM G++P +F + +L A + +E G+ +H ++++
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 61 IMVDTVVGTALIEMYAKS-------------------------------GCVEKSLEVFN 89
+ + V +L+ MYAK G ++ ++ F
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLG-AKPDDVTFITVLSACSHAGLVE 148
+ E+D +W S+I G G +AL++F M + PD T +VLSAC++ +
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLC 296
Query: 149 EGRKLF-HSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGA 207
G+++ H +++ + I + I + R G + A L+ + T ++ + + A
Sbjct: 297 IGKQIHSHIVTTGFDISGIV--LNALISMYSRCGGVETARRLIEQ--RGTKDLKIEGFTA 352
Query: 208 LLSACRTYGNIDMGERLATTL 228
LL G+++ + + +L
Sbjct: 353 LLDGYIKLGDMNQAKNIFVSL 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 34/168 (20%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGV-KPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+G+ Q A+ +F M + PD+F + ++L+ CA L G+ IH +++
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 60 RIMVDTVVGTALIEMYAKSGCVE---------------------------------KSLE 86
+ +V ALI MY++ G VE ++
Sbjct: 309 GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKN 368
Query: 87 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTF 134
+F LK++D +WT++I G +G +A+ LF +M G +P+ T
Sbjct: 369 IFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 70 ALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKP 129
++ Y+K G ++ + E F+ L ++D+ SWT++I G G+ +KA+ + M K G +P
Sbjct: 85 TVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEP 144
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAG 181
T VL++ + +E G+K+ HS K ++ N+ +++ + G
Sbjct: 145 TQFTLTNVLASVAATRCMETGKKV-HSFIVKLGLRGNVSVSNSLLNMYAKCG 195
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 176/309 (56%), Gaps = 17/309 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN- 59
MI+ V+F +D A+ LF +MQ R +PD + + ++L+ CA G+L G W H +++
Sbjct: 223 MIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC 281
Query: 60 --RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ +D +V +LIEMY K G + + +VF G++++D ASW ++I G A +G+ +A+
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 341
Query: 118 LFEAM--EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
F+ M ++ +P+ VTF+ +L AC+H G V +GR+ F M Y I+P LEHYGC +D
Sbjct: 342 FFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVD 401
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG-NIDMGERLATTLXXXXXX 234
L+ RAG + EA ++VM +P + D +I + +LL AC G ++++ E +A +
Sbjct: 402 LIARAGYITEAIDMVMSMPMKPDAVI---WRSLLDACCKKGASVELSEEIARNIIGTKED 458
Query: 235 XXXXX-------XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGV 287
+YASA RW DV VR M + GI+K PG SSI++ G +
Sbjct: 459 NESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFA 518
Query: 288 GAFSHSLTK 296
G SH TK
Sbjct: 519 GDTSHPQTK 527
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 9 NRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVV 67
+R +EA L+ M RG PDK +L CA G+ +H ++++ D V
Sbjct: 129 SRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYV 188
Query: 68 GTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGA 127
LI +Y GC++ + +VF+ + E+ SW S+I L G+ + AL+LF M++
Sbjct: 189 NNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SF 247
Query: 128 KPDDVTFITVLSACSHAGLVEEG 150
+PD T +VLSAC+ G + G
Sbjct: 248 EPDGYTMQSVLSACAGLGSLSLG 270
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/262 (41%), Positives = 159/262 (60%), Gaps = 5/262 (1%)
Query: 17 LFGDMQ-VRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMY 75
LF +M V VKPD+ +V+L++G A +G L HGRW+H VI ++ D + +ALI+MY
Sbjct: 354 LFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMY 413
Query: 76 AKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFI 135
K G +E++ VF EKD A WTS+I GLA +G +AL+LF M++ G P++VT +
Sbjct: 414 CKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLL 473
Query: 136 TVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM-KLP 194
VL+ACSH+GLVEEG +F+ M K+ P EHYG +DLL RAG + EA+++V K+P
Sbjct: 474 AVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMP 533
Query: 195 DQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADRWED 254
+ + ++G++LSACR +I+ E T L IYA+ RW
Sbjct: 534 MRPSQ---SMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGY 590
Query: 255 VNKVRSKMKDLGIKKVPGYSSI 276
+K R M++ G+KK GYSS+
Sbjct: 591 SDKTREAMENRGVKKTAGYSSV 612
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 113/255 (44%), Gaps = 46/255 (18%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY + EA+ L+ M G++PD++ V++LL C + G+ +H + IE R
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGW-IERR 261
Query: 61 IMV---DTVVGTALIEMYAKSGCVEKSL--EVFNGLKEKDTASWTSIICGLAMNGKTNKA 115
V + ++ AL++MY K C E L F+ +K+KD SW +++ G G A
Sbjct: 262 GPVYSSNLILSNALLDMYFK--CKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAA 319
Query: 116 LELFEAMEKLG---------------------------------AKPDDVTFITVLSACS 142
+F+ M K KPD VT ++++S +
Sbjct: 320 QAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAA 379
Query: 143 HAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIV 202
+ G + GR + H + + +K + ID+ + G++ A +V K + D V
Sbjct: 380 NNGELSHGRWV-HGLVIRLQLKGDAFLSSALIDMYCKCGIIERA-FMVFKTATEKD---V 434
Query: 203 PLYGALLSACRTYGN 217
L+ ++++ +GN
Sbjct: 435 ALWTSMITGLAFHGN 449
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 4/141 (2%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIM-VDTVVGTA 70
+E L+ M V PD+ + L+ S L + IH ++I + + + + +
Sbjct: 115 NECFGLYSSMIRHRVSPDRQTFLYLMKA---SSFLSEVKQIHCHIIVSGCLSLGNYLWNS 171
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
L++ Y + G + +VF + D +S+ +I G A G + +AL+L+ M G +PD
Sbjct: 172 LVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPD 231
Query: 131 DVTFITVLSACSHAGLVEEGR 151
+ T +++L C H + G+
Sbjct: 232 EYTVLSLLVCCGHLSDIRLGK 252
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 207 bits (528), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/297 (36%), Positives = 169/297 (56%), Gaps = 7/297 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI GYV+ +++EA+ +M +KP+KF + L CA+ G L H +W+H +I++
Sbjct: 135 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 194
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I ++ ++ +AL+++YAK G + S EVF +K D + W ++I G A +G +A+ +F
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
ME PD +TF+ +L+ CSH GL+EEG++ F MS ++ I+P LEHYG +DLLGR
Sbjct: 255 SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGR 314
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG + EA EL+ +P + D +I + +LLS+ RTY N ++GE +
Sbjct: 315 AGRVKEAYELIESMPIEPDVVI---WRSLLSSSRTYKNPELGE---IAIQNLSKAKSGDY 368
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
IY+S +WE KVR M GI+K G S ++ G + G SH TK
Sbjct: 369 VLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETK 425
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 207 bits (526), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 103/279 (36%), Positives = 167/279 (59%), Gaps = 5/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G V R +E+ LF +M+ G++PD ++ +LT C+ AL HG H Y + +
Sbjct: 380 LITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHG 439
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V+T + AL++MY K G ++ + VF+ + ++D SW +++ G ++G +AL LF
Sbjct: 440 YAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFN 499
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSS-KYHIKPNLEHYGCFIDLLGR 179
+M++ G PD+VT + +LSACSH+GLV+EG++LF+SMS +++ P ++HY C DLL R
Sbjct: 500 SMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLAR 559
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG L EA + V K+P + D + + G LLSAC TY N ++G ++ +
Sbjct: 560 AGYLDEAYDFVNKMPFEPD---IRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLV 616
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
Y++A+RWED ++R K G+ K PGYS +D+
Sbjct: 617 LLSNT-YSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 115/268 (42%), Gaps = 48/268 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG----VKPDKFIVVALLTGCAQSGALEHGRWIHDYV 56
MI GYV+ EA +F M V V P + +L GCA+ G L GR +H Y
Sbjct: 277 MIGGYVENEMIKEAGEVFFQMLVNDNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYA 334
Query: 57 IENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKAL 116
++ ++D V +I YAK G + + F+ + KD S+ S+I G +N + ++
Sbjct: 335 VKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESF 394
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSH--------------------------------- 143
LF M G +PD T + VL+ACSH
Sbjct: 395 RLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMY 454
Query: 144 --AGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGL-LHEAEELVMKLPDQTDEI 200
G ++ +++F +M + + N +G I LG+ L L + + PD+ +
Sbjct: 455 TKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLL 514
Query: 201 IVPLYGALLSACRTYGNIDMGERLATTL 228
A+LSAC G +D G++L ++
Sbjct: 515 ------AILSACSHSGLVDEGKQLFNSM 536
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 83/154 (53%), Gaps = 1/154 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y + ++A+ L+ M GV+P K+ +L CA A++ G+ IH +V +
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V TAL++ YAK G +E +++VF+ + ++D +W ++I G +++ + LF
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 121 AMEKL-GAKPDDVTFITVLSACSHAGLVEEGRKL 153
M ++ G P+ T + + A AG + EG+ +
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV 227
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 1 MINGYVQFNRFDEAIALFGDMQ-VRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+G+ + I LF DM+ + G+ P+ +V + ++GAL G+ +H Y
Sbjct: 175 MISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM 234
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D VV T ++++YAKS C+ + VF+ +K+ +W+++I G N +A E+F
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 120 EAMEKLGAKPDDVTFIT------VLSACSHAGLVEEGR 151
M D+V +T +L C+ G + GR
Sbjct: 295 FQM----LVNDNVAMVTPVAIGLILMGCARFGDLSGGR 328
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 4/168 (2%)
Query: 32 IVVALLTGCAQSGALEHGRWIHDYVIENRI-MVDTVVGTALIEMYAKSGCVEKSLEVFNG 90
+ ++LL C +S L G+ IH ++++ + + + V L +YA VE + VF+
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 91 LKEK--DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVE 148
+ + +W +I A N KAL+L+ M G +P T+ VL AC+ ++
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
+G KL HS + ++ +D + G L A ++ ++P +
Sbjct: 121 DG-KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKR 167
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 163/266 (61%), Gaps = 6/266 (2%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
+E + LF MQVR P++ +VAL+ CA G G W H YV++N + ++ VGT+L
Sbjct: 201 EEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSL 257
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
I++Y+K GC+ + +VF+ + ++D + + ++I GLA++G + +EL++++ G PD
Sbjct: 258 IDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDS 317
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
TF+ +SACSH+GLV+EG ++F+SM + Y I+P +EHYGC +DLLGR+G L EAEE +
Sbjct: 318 ATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIK 377
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADR 251
K+P + + L+ + L + +T+G+ + GE L IYA +R
Sbjct: 378 KMPVKPN---ATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNR 434
Query: 252 WEDVNKVRSKMKDLGIKKVPGYSSID 277
W DV K R MKD + K PG S+++
Sbjct: 435 WTDVEKTRELMKDHRVNKSPGISTLN 460
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 101/219 (46%), Gaps = 20/219 (9%)
Query: 5 YVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGAL-EHGRWIHDYVIE--NRI 61
++ F+ +D+ ++ + V+P++F +L HGR +H +V++ +
Sbjct: 91 HLAFSLYDQILSSRSNF----VRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPV 146
Query: 62 MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 121
D V AL+ YA G + ++ +F ++E D A+W +++ A + + + E+
Sbjct: 147 NHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLL 206
Query: 122 MEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNL---EHYGC-FIDLL 177
++ +P++++ + ++ +C++ G G + Y +K NL + G IDL
Sbjct: 207 FMRMQVRPNELSLVALIKSCANLGEFVRG-----VWAHVYVLKNNLTLNQFVGTSLIDLY 261
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
+ G L A K+ D+ + V Y A++ +G
Sbjct: 262 SKCGCLSFAR----KVFDEMSQRDVSCYNAMIRGLAVHG 296
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 113/296 (38%), Positives = 171/296 (57%), Gaps = 5/296 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKP-DKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+G+VQ + EA ++F +M+ V D ++ +++ CA A GR +H VI
Sbjct: 208 LISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIAL 267
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ ALI+MYAK V + ++F+ ++ +D SWTS+I G+A +G+ KAL L+
Sbjct: 268 GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALY 327
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M G KP++VTF+ ++ ACSH G VE+GR+LF SM+ Y I+P+L+HY C +DLLGR
Sbjct: 328 DDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGR 387
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXX-XXX 238
+GLL EAE L+ +P DE P + ALLSAC+ G MG R+A L
Sbjct: 388 SGLLDEAENLIHTMPFPPDE---PTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPST 444
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSL 294
IYASA W V++ R K+ ++ ++K PG+SS+++ G SH L
Sbjct: 445 YILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPL 500
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 64/97 (65%)
Query: 26 VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSL 85
++PD F+ AL+ CA G+++HGR +H + I + D VV ++L++MYAK G + +
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 86 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 122
VF+ ++ K+T SWT+++ G A +G+ +ALELF +
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL 197
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 79/153 (51%), Gaps = 4/153 (2%)
Query: 37 LTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDT 96
L CA++ L + +H ++++ I+ + L+ +Y K G +L+VF+ + +D
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 97 ASWTSIICGLAMNGKTNKALELFEAMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLF- 154
+W S++ L + K L +F ++ +PDD F ++ AC++ G ++ GR++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 155 HSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAE 187
H + S+Y ++ +D+ + GLL+ A+
Sbjct: 130 HFIVSEYANDEVVK--SSLVDMYAKCGLLNSAK 160
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 163/280 (58%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G ++ + A +F M++ GV PD+F + L + ALE GR IH ++
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D VGT+L++MYAK G ++ + +F ++ + +W +++ GLA +G+ + L+LF+
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ LG KPD VTFI VLSACSH+GLV E K SM Y IKP +EHY C D LGRA
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GL+ +AE L+ + + E +Y LL+ACR G+ + G+R+AT L
Sbjct: 769 GLVKQAENLIESM---SMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYV 825
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+YA+A +W+++ R+ MK +KK PG+S I+++
Sbjct: 826 LLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKN 865
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 95/193 (49%), Gaps = 1/193 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GY Q + + + LF M +G + D F + + C A+ G+ +H Y I++
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+D V + +++MY K G + + F+ + D +WT++I G NG+ +A +F
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +G PD+ T T+ A S +E+GR++ H+ + K + + +D+ +
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQI-HANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 181 GLLHEAEELVMKL 193
G + +A L ++
Sbjct: 667 GSIDDAYCLFKRI 679
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQ-SGALEHGRWIHDYVIENRIMVDTVVGTAL 71
EA+ LF + G+KPD++ + ++L + L + +H + I+ + D+ V TAL
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTAL 458
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
I+ Y+++ C+ K E+ D +W +++ G + +K L+LF M K G + DD
Sbjct: 459 IDAYSRNRCM-KEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDD 517
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
T TV C + +G+++ H+ + K +L +D+ + G + A+
Sbjct: 518 FTLATVFKTCGFLFAINQGKQV-HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFD 576
Query: 192 KLPDQTD 198
+P D
Sbjct: 577 SIPVPDD 583
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 70/141 (49%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRI 61
++ Y+ ++ + F DM V+ D+ + +L + +L G+ +H ++ +
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 62 MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 121
+ V +LI MY K + VF+ + E+D SW S+I G+A NG +A+ LF
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 122 MEKLGAKPDDVTFITVLSACS 142
+ + G KPD T +VL A S
Sbjct: 407 LLRCGLKPDQYTMTSVLKAAS 427
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 112/296 (37%), Positives = 171/296 (57%), Gaps = 7/296 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQ--VRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVI 57
+ + Y++ R + + LF M+ V G VKPD + L CA GAL+ G+ +HD++
Sbjct: 185 LFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFID 244
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
EN + + L+ MY++ G ++K+ +VF G++E++ SWT++I GLAMNG +A+E
Sbjct: 245 ENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIE 304
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSS-KYHIKPNLEHYGCFIDL 176
F M K G P++ T +LSACSH+GLV EG F M S ++ IKPNL HYGC +DL
Sbjct: 305 AFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDL 364
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXX 236
LGRA LL +A L+ + + D I + LL ACR +G++++GER+ + L
Sbjct: 365 LGRARLLDKAYSLIKSMEMKPDSTI---WRTLLGACRVHGDVELGERVISHLIELKAEEA 421
Query: 237 XXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
Y++ +WE V ++RS MK+ I PG S+I+L+G + V SH
Sbjct: 422 GDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSH 477
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 84/181 (46%), Gaps = 5/181 (2%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVAL-LTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
E LF ++ P + + L C +SG L G IH + + + D+++ T L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTL 154
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKL---GAK 128
+++Y+ + +VF+ + ++DT SW + N +T L LF+ M+ K
Sbjct: 155 MDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK 214
Query: 129 PDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEE 188
PD VT + L AC++ G ++ G+++ H + + L + + R G + +A +
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQV-HDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQ 273
Query: 189 L 189
+
Sbjct: 274 V 274
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 204 bits (519), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 154/280 (55%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY + E I LF M +KPD+F +V L+ CA GAL+ G W + +
Sbjct: 284 MIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE 343
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + + ALI+MYAK G + + EVF +KEKD + I GLA NG + +F
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG 403
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
EKLG PD TF+ +L C HAGL+++G + F+++S Y +K +EHYGC +DL GRA
Sbjct: 404 QTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRA 463
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G+L +A L+ +P + + I+ +GALLS CR + + E + L
Sbjct: 464 GMLDDAYRLICDMPMRPNAIV---WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYV 520
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
IY+ RW++ +VR M G+KK+PGYS I+LEG
Sbjct: 521 QLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEG 560
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 1/196 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ +GY R EAI LF M GVKPD + +V +L+ C G L+ G WI Y+ E
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ++ V T L+ +YAK G +EK+ VF+ + EKD +W+++I G A N + +ELF
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + KPD + + LS+C+ G ++ G S+ ++ NL ID+ +
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKC 361
Query: 181 GLLHEAEELVMKLPDQ 196
G + E+ ++ ++
Sbjct: 362 GAMARGFEVFKEMKEK 377
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 98/189 (51%), Gaps = 1/189 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+V + F E + LF ++ G+ F +L C ++ + + G +H V++
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D T+L+ +Y+ SG + + ++F+ + ++ +WT++ G +G+ +A++LF+
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M ++G KPD + VLSAC H G ++ G + M + ++ N ++L +
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM-EEMEMQKNSFVRTTLVNLYAKC 260
Query: 181 GLLHEAEEL 189
G + +A +
Sbjct: 261 GKMEKARSV 269
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 204 bits (518), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/280 (37%), Positives = 161/280 (57%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GYVQ E + ++ DM+ + PD++ ++ C+ LEHG+ H +I+
Sbjct: 180 MISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRC 239
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I + +V +AL++MY K VF+ L ++ +WTS+I G +GK ++ L+ FE
Sbjct: 240 IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFE 299
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ G +P+ VTF+ VL+AC+H GLV++G + F+SM Y I+P +HY +D LGRA
Sbjct: 300 KMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRA 359
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA E VMK P + P++G+LL ACR +GN+ + E AT
Sbjct: 360 GRLQEAYEFVMKSPCKEHP---PVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYV 416
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
YAS E +KVR KM++ G+KK PGYS I+L+G
Sbjct: 417 VFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQG 456
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
R EA+ L ++ V+P+ + V LL C Q G+ IH + ++ +
Sbjct: 91 RLKEAVGLLWSSGLQ-VEPETYAV--LLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKV 147
Query: 70 ALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKP 129
L+ +YA SG ++ + +F LK +D W ++I G G + L ++ M + P
Sbjct: 148 KLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVP 207
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNL 167
D TF +V ACS +E G++ H++ K IK N+
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRA-HAVMIKRCIKSNI 244
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 170/293 (58%), Gaps = 5/293 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GYVQ ++EA+ L+ Q ++ ++F + +++ C+ AL G+ +H + ++
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V ++ ++MYAK G + +S +F+ ++EK+ W +II G A + + + + LFE
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ G P++VTF ++LS C H GLVEEGR+ F M + Y + PN+ HY C +D+LGRA
Sbjct: 354 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRA 413
Query: 181 GLLHEAEELVMKLP-DQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
GLL EA EL+ +P D T I +G+LL++CR Y N+++ E A L
Sbjct: 414 GLLSEAYELIKSIPFDPTASI----WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNH 469
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IYA+ +WE++ K R ++D +KKV G S ID++ ++ VG H
Sbjct: 470 VLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGH 522
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 108/200 (54%), Gaps = 1/200 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y + EA+ +F +M+ G K +F + ++L+ C + + +H ++
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I ++ VGTAL+++YAK G ++ +++VF +++K + +W+S++ G N +AL L+
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+++ + + T +V+ ACS+ + EG+++ H++ K N+ +D+ +
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQM-HAVICKSGFGSNVFVASSAVDMYAKC 311
Query: 181 GLLHEAEELVMKLPDQTDEI 200
G L E+ + ++ ++ E+
Sbjct: 312 GSLRESYIIFSEVQEKNLEL 331
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 1/169 (0%)
Query: 29 DKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVF 88
++ +V +L CA++GA+ + H +I + D + LI Y+K G VE + +VF
Sbjct: 60 NRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVF 119
Query: 89 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVE 148
+G+ E+ SW ++I N ++AL++F M G K + T +VLSAC
Sbjct: 120 DGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDAL 179
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
E +KL H +S K I NL +DL + G++ +A ++ + D++
Sbjct: 180 ECKKL-HCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS 227
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 173/292 (59%), Gaps = 4/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + EAI +F +M + V+PD + + ++ CAQ G+LE R +++YV +
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D + +ALI+M+AK G VE + VF+ ++D W+++I G ++G+ +A+ L+
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
AME+ G P+DVTF+ +L AC+H+G+V EG F+ M+ + I P +HY C IDLLGRA
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRA 472
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +A E++ +P Q V ++GALLSAC+ + ++++GE A L
Sbjct: 473 GHLDQAYEVIKCMPVQPG---VTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYV 529
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
+YA+A W+ V +VR +MK+ G+ K G S +++ G + VG SH
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSH 581
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 91/170 (53%), Gaps = 3/170 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY + N F +A+ ++ +MQ+ V PD F LL C+ L+ GR++H V
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNG--LKEKDTASWTSIICGLAMNGKTNKALEL 118
D V LI +YAK + + VF G L E+ SWT+I+ A NG+ +ALE+
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK-YHIKPNL 167
F M K+ KPD V ++VL+A + +++GR + S+ I+P+L
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 106/209 (50%), Gaps = 5/209 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ Y Q EA+ +F M+ VKPD +V++L L+ GR IH V++
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ++ + +L MYAK G V + +F+ +K + W ++I G A NG +A+++F
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +PD ++ + +SAC+ G +E+ R ++ + + + ++ ID+ +
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYEYV-GRSDYRDDVFISSALIDMFAKC 371
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALL 209
G + E LV D+T + V ++ A++
Sbjct: 372 GSV-EGARLVF---DRTLDRDVVVWSAMI 396
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 177/304 (58%), Gaps = 13/304 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVV-ALLTGCAQSGALEHGRWIHDYVIEN 59
M+ GY+ E + L +M R F+ + ++L+ CAQSG L GRW+H Y ++
Sbjct: 214 MVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKK 273
Query: 60 RIMV-------DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKT 112
+M+ D +VGTAL++MYAK G ++ S+ VF +++++ +W ++ GLAM+GK
Sbjct: 274 EMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKG 333
Query: 113 NKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC 172
+++F M + KPDD+TF VLSACSH+G+V+EG + FHS+ Y ++P ++HY C
Sbjct: 334 RMVIDMFPQMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRF-YGLEPKVDHYAC 391
Query: 173 FIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXX 232
+DLLGRAGL+ EAE L+ ++P +E+++ G+LL +C +G +++ ER+ L
Sbjct: 392 MVDLLGRAGLIEEAEILMREMPVPPNEVVL---GSLLGSCSVHGKVEIAERIKRELIQMS 448
Query: 233 XXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
+Y + R + + +R ++ GI+K+PG SSI + + G SH
Sbjct: 449 PGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSH 508
Query: 293 SLTK 296
TK
Sbjct: 509 PRTK 512
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 33 VVALLTGCAQSGALEHGRWIHDYVIEN--RIMVDTVVGTALIEMYAKSGCVEKSLEVFN- 89
V LL CA L G+ +H + + + + + AL + YA SG + + ++F+
Sbjct: 9 VRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDE 68
Query: 90 -GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSH---AG 145
L EKD WT+++ + G +++LF M + + DDV+ + + C+ G
Sbjct: 69 IPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLG 128
Query: 146 LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
++G H ++ K + +++ +D+ G+ GL+ E + + +L +++
Sbjct: 129 FAQQG----HGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKS 176
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 32/183 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ + ++ ++ LF +M+ + V+ D VV L CA+ L + H ++
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMG 141
Query: 61 IMVDTVVGTALIEMYAKSGCV-------------------------------EKSLEVFN 89
++ V AL++MY K G V E+ EVF+
Sbjct: 142 VLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFH 201
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELF-EAMEKLGAKPDDVTFITVLSACSHAGLVE 148
+ E++ +WT ++ G G T + LEL E + + G + VT ++LSAC+ +G +
Sbjct: 202 EMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLV 261
Query: 149 EGR 151
GR
Sbjct: 262 VGR 264
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 161/286 (56%), Gaps = 19/286 (6%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y + +E + L M+ +KP+ V LL+ CA S A GR + D + E R
Sbjct: 299 MIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEER 358
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I +D ++GTAL++MYAK G +EK++E+FN +K+KD SWT++I G +G +A+ LF
Sbjct: 359 IALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFN 418
Query: 121 AMEKLGAK--PDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
ME+ K P+++TF+ VL+ACSH GLV EG + F M Y P +EHYGC +DLLG
Sbjct: 419 KMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLG 478
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG L EA EL+ LP +D + ALL+ACR YGN D+GE + L
Sbjct: 479 RAGQLEEAYELIRNLPITSDS---TAWRALLAACRVYGNADLGESVMMRLAEMGETHPAD 535
Query: 239 XXXXXXIYASADRWE-----DVNKVRSKMKDLGIKKVPGYSSIDLE 279
+A A E ++NK R K GYS+I++E
Sbjct: 536 AILLAGTHAVAGNPEKSLDNELNKGR---------KEAGYSAIEIE 572
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 1/196 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY+Q ++ A+ LF M+ V + +++ L+ + G L H I+
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIG 257
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +D + TALI MY K+G + + +F+ KD +W +I A G + + L
Sbjct: 258 LDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLR 317
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ KP+ TF+ +LS+C+++ GR + + + I + +D+ +
Sbjct: 318 QMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEE-RIALDAILGTALVDMYAKV 376
Query: 181 GLLHEAEELVMKLPDQ 196
GLL +A E+ ++ D+
Sbjct: 377 GLLEKAVEIFNRMKDK 392
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 132/330 (40%), Gaps = 62/330 (18%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY + + A ++F ++ +G+ D+F + L C++ + G +H + +
Sbjct: 96 MIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSG 155
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELF 119
MV T + ALI Y G + + +VF+ + + D ++++++ G K AL+LF
Sbjct: 156 FMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLF 215
Query: 120 EAMEKLGAKPDDVTFITVLSA----------------CSHAGL----------------- 146
M K + T ++ LSA C GL
Sbjct: 216 RIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKT 275
Query: 147 --VEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPL 204
+ R++F I+ ++ + C ID + GLL E L+ ++ + +
Sbjct: 276 GGISSARRIFDCA-----IRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSST 330
Query: 205 YGALLSAC---------RTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADRWEDV 255
+ LLS+C RT ++ ER+A +YA E
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIA--------LDAILGTALVDMYAKVGLLEKA 382
Query: 256 NKVRSKMKDLGIKKVPGYSSIDLEGYGNSG 285
++ ++MKD K V ++++ + GYG G
Sbjct: 383 VEIFNRMKD---KDVKSWTAM-ISGYGAHG 408
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 163/288 (56%), Gaps = 13/288 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQ-----------VRGVKPDKFIVVALLTGCAQSGALEHG 49
MI GYV ++A+ L MQ +KP+ ++ +L CA AL G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 50 RWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMN 109
+ IH Y I+N + D VG+AL++MYAK GC++ S +VF+ + +K+ +W II M+
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596
Query: 110 GKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEH 169
G +A++L M G KP++VTFI+V +ACSH+G+V+EG ++F+ M Y ++P+ +H
Sbjct: 597 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH 656
Query: 170 YGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLX 229
Y C +DLLGRAG + EA +L+ +P ++ + +LL A R + N+++GE A L
Sbjct: 657 YACVVDLLGRAGRIKEAYQLMNMMPRDFNK--AGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 230 XXXXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
IY+SA W+ +VR MK+ G++K PG S I+
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 111/221 (50%), Gaps = 16/221 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQ-VRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI GY Q EA+ LF M+ G+ + + ++ C +SGA IH +V++
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKR 434
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ D V L++MY++ G ++ ++ +F ++++D +W ++I G + AL L
Sbjct: 435 GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLL 494
Query: 120 EAMEKL------GA-----KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLE 168
M+ L GA KP+ +T +T+L +C+ + +G+++ H+ + K ++ ++
Sbjct: 495 HKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI-HAYAIKNNLATDVA 553
Query: 169 HYGCFIDLLGRAGLLHEAEELVMKLPDQ---TDEIIVPLYG 206
+D+ + G L + ++ ++P + T +I+ YG
Sbjct: 554 VGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 1/149 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ V+ N EA+ + DM V G+KPD + ALL A +E G+ IH +V +
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 61 IMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
VD+V V L+ +Y K G +VF+ + E++ SW S+I L K ALE F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVE 148
M +P T ++V++ACS+ + E
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPE 216
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 3/198 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN- 59
+++ Q + EA+ +M + GV+PD+F + ++L C+ L G+ +H Y ++N
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ ++ VG+AL++MY V VF+G+ ++ W ++I G + N +AL LF
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 120 EAMEK-LGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
ME+ G + T V+ AC +G ++ H K + + +D+
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSR-KEAIHGFVVKRGLDRDRFVQNTLMDMYS 451
Query: 179 RAGLLHEAEELVMKLPDQ 196
R G + A + K+ D+
Sbjct: 452 RLGKIDIAMRIFGKMEDR 469
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQ---SGALEHGRWIHDYVI 57
+I+ F +++ A+ F M V+P F +V+++T C+ L G+ +H Y +
Sbjct: 170 LISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGL 229
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ ++ T L+ MY K G + S + +D +W +++ L N + +ALE
Sbjct: 230 RKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 288
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M G +PD+ T +VL ACSH ++ G++L
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 200 bits (509), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/282 (38%), Positives = 158/282 (56%), Gaps = 5/282 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G+ Q R D + L+ M+ P+ + ALL+ C SGAL GR +H +
Sbjct: 192 MISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMG 251
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + +LI MY K G ++ + +F+ KD SW S+I G A +G +A+ELFE
Sbjct: 252 LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFE 311
Query: 121 -AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M K G KPD +T++ VLS+C HAGLV+EGRK F+ M +++ +KP L HY C +DLLGR
Sbjct: 312 LMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM-AEHGLKPELNHYSCLVDLLGR 370
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
GLL EA EL+ +P + + +I +G+LL +CR +G++ G R A
Sbjct: 371 FGLLQEALELIENMPMKPNSVI---WGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATH 427
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGY 281
+YAS W++ VR MKD G+K PG S I++ Y
Sbjct: 428 VQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNY 469
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 93/192 (48%), Gaps = 5/192 (2%)
Query: 25 GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKS 84
G D + + + + C + G H ++ + D +G++L+ +Y SG VE +
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 85 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHA 144
+VF + E++ SWT++I G A + + L+L+ M K + P+D TF +LSAC+ +
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 145 GLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPL 204
G + +GR + H + +K L I + + G L +A ++ DQ V
Sbjct: 235 GALGQGRSV-HCQTLHMGLKSYLHISNSLISMYCKCGDLKDA----FRIFDQFSNKDVVS 289
Query: 205 YGALLSACRTYG 216
+ ++++ +G
Sbjct: 290 WNSMIAGYAQHG 301
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 200 bits (509), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 105/278 (37%), Positives = 163/278 (58%), Gaps = 4/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q +EA+ +F DM G+ PDK ++++ G + G+ IH YV +
Sbjct: 288 IITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTG 347
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D + AL+ MYAK+G E + + F L++KDT +WT +I GLA +G N+AL +F+
Sbjct: 348 FVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQ 407
Query: 121 AMEKLG-AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M++ G A PD +T++ VL ACSH GLVEEG++ F M + ++P +EHYGC +D+L R
Sbjct: 408 RMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSR 467
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG EAE LV +P + + V ++GALL+ C + N+++ +R+ + +
Sbjct: 468 AGRFEEAERLVKTMPVKPN---VNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIY 524
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
IYA A RW DV +R MK + KV G+SS++
Sbjct: 525 VLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 96/168 (57%), Gaps = 9/168 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIH------- 53
+I+G+V NRF +AI F +MQ GVK ++ I+V LL C + + G+W H
Sbjct: 179 LISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG 238
Query: 54 -DYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKT 112
D ++++ + ++ T+LI+MYAK G + + +F+G+ E+ SW SII G + NG
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDA 298
Query: 113 NKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
+AL +F M LG PD VTF++V+ A G + G+ + H+ SK
Sbjct: 299 EEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSI-HAYVSK 345
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 9/205 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY D+A+ + +M +G PD F +L C+ ++ G +H +V++
Sbjct: 78 MIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG 137
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V+ V T L+ MY G V L VF + + + +W S+I G N + + A+E F
Sbjct: 138 FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFR 197
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCF------- 173
M+ G K ++ + +L AC + G K FH P + F
Sbjct: 198 EMQSNGVKANETIMVDLLVACGRCKDIVTG-KWFHGFLQGLGFDPYFQSKVGFNVILATS 256
Query: 174 -IDLLGRAGLLHEAEELVMKLPDQT 197
ID+ + G L A L +P++T
Sbjct: 257 LIDMYAKCGDLRTARYLFDGMPERT 281
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/280 (36%), Positives = 167/280 (59%), Gaps = 4/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+GY Q EAI ++ M+ G + ++ V++L C+Q+GAL G +H +++N
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN 480
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ +D V T+L +MY K G +E +L +F + ++ W ++I +G KA+ LF
Sbjct: 481 GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLF 540
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M G KPD +TF+T+LSACSH+GLV+EG+ F M + Y I P+L+HYGC +D+ GR
Sbjct: 541 KEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGR 600
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG L A + + + Q D ++GALLSACR +GN+D+G+ + L
Sbjct: 601 AGQLETALKFIKSMSLQPD---ASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYH 657
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
+YASA +WE V+++RS G++K PG+SS++++
Sbjct: 658 VLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 100/184 (54%), Gaps = 3/184 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN-RIMVDTVVGTAL 71
AI+LF +M++ ++PD +++L + +Q G + R + + + + D +G A+
Sbjct: 331 RAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV 390
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGA-KPD 130
+ MYAK G V+ + VFN L D SW +II G A NG ++A+E++ ME+ G +
Sbjct: 391 VVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN 450
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELV 190
T+++VL ACS AG + +G KL H K + ++ D+ G+ G L +A L
Sbjct: 451 QGTWVSVLPACSQAGALRQGMKL-HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 191 MKLP 194
++P
Sbjct: 510 YQIP 513
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 95/200 (47%), Gaps = 5/200 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY Q EA+ L ++ D VV+LL+ C ++G G IH Y I++
Sbjct: 222 MISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V LI++YA+ G + +VF+ + +D SW SII +N + +A+ LF+
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +PD +T I++ S S G + R + K ++ + + +
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 181 GLLHEAEELVMKLPDQTDEI 200
GL+ A + LP+ TD I
Sbjct: 398 GLVDSARAVFNWLPN-TDVI 416
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 159/279 (56%), Gaps = 4/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G F+E+ F ++Q G+ P++ + +L+ C+QSG+ E G+ +H +V +
Sbjct: 240 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAG 299
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDT-ASWTSIICGLAMNGKTNKALELF 119
V ALI+MY++ G V + VF G++EK SWTS+I GLAM+G+ +A+ LF
Sbjct: 300 YSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLF 359
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G PD ++FI++L ACSHAGL+EEG F M YHI+P +EHYGC +DL GR
Sbjct: 360 NEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGR 419
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
+G L +A + + ++P I+ + LL AC ++GNI++ E++ L
Sbjct: 420 SGKLQKAYDFICQMPIPPTAIV---WRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDL 476
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
YA+A +W+DV +R M IKK +S +++
Sbjct: 477 VLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 14/178 (7%)
Query: 4 GYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMV 63
G V+F R +F +M +P+ A++T C + + R I D ++ +
Sbjct: 155 GCVEFAR-----KVFDEMH----QPNLVAWNAVITACFRGNDVAGAREIFDKML----VR 201
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 123
+ ++ Y K+G +E + +F+ + +D SW+++I G+A NG N++ F ++
Sbjct: 202 NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQ 261
Query: 124 KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAG 181
+ G P++V+ VLSACS +G E G K+ H K + ID+ R G
Sbjct: 262 RAGMSPNEVSLTGVLSACSQSGSFEFG-KILHGFVEKAGYSWIVSVNNALIDMYSRCG 318
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 32/236 (13%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
++ GY + + ++A+F +M +G V PD F ++ +L G +H +++
Sbjct: 76 LVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKH 135
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ VGT LI MY GCVE + +VF+ + + + +W ++I A E+F
Sbjct: 136 GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIF 195
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPN-----LEHYGCF- 173
+ M + ++ +L+ AG +E +++F M + + + + H G F
Sbjct: 196 DKM----LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFN 251
Query: 174 -----IDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
L RAG+ P++ V L G +LSAC G+ + G+ L
Sbjct: 252 ESFLYFRELQRAGM----------SPNE-----VSLTG-VLSACSQSGSFEFGKIL 291
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/292 (36%), Positives = 169/292 (57%), Gaps = 5/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G+ Q +R D A+ LF M+ G ++ + ++L C LE G H +++ +
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--K 288
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D ++ AL++MY K G +E +L VFN +KE+D +W+++I GLA NG + +AL+LFE
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G KP+ +T + VL ACSHAGL+E+G F SM Y I P EHYGC IDLLG+A
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +A +L+ ++ + D + + LL ACR N+ + E A +
Sbjct: 409 GKLDDAVKLLNEMECEPDAVT---WRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYT 465
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IYA++ +W+ V ++R++M+D GIKK PG S I++ ++ +G SH
Sbjct: 466 LLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSH 517
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 104/213 (48%), Gaps = 16/213 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y + +A+ L M V+P+ + ++L C + R +H +I+
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC---NGMSDVRMLHCGIIKEG 189
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D V +ALI+++AK G E +L VF+ + D W SII G A N +++ ALELF+
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHI---KPNLEHYGCFIDLL 177
M++ G + T +VL AC+ L+E G M + HI +L +D+
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELG------MQAHVHIVKYDQDLILNNALVDMY 303
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
+ G L +A +++ +Q E V + ++S
Sbjct: 304 CKCGSLEDA----LRVFNQMKERDVITWSTMIS 332
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 12/148 (8%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWI--HDYVIENRIMVDTVVGTA 70
A+ +Q G+ D L+ C + A+ G I H Y +R M+ V
Sbjct: 44 RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLV--NV 101
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
LI MY K + + ++F+ + +++ SWT++I + KALEL M + +P+
Sbjct: 102 LINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPN 161
Query: 131 DVTFITVLSACS--------HAGLVEEG 150
T+ +VL +C+ H G+++EG
Sbjct: 162 VYTYSSVLRSCNGMSDVRMLHCGIIKEG 189
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 97/281 (34%), Positives = 170/281 (60%), Gaps = 4/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
M++ + E + LF M +K ++ +V+ L CA +GAL G IH +++ N
Sbjct: 204 MVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRN 263
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
++ +V T+L++MY K GC++K+L +F +++++ +++++I GLA++G+ AL +F
Sbjct: 264 ISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMF 323
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M K G +PD V +++VL+ACSH+GLV+EGR++F M + ++P EHYGC +DLLGR
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AGLL EA E + +P + +++I + LS CR NI++G+ A L
Sbjct: 384 AGLLEEALETIQSIPIEKNDVI---WRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDY 440
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+Y+ W+DV + R+++ G+K+ PG+S ++L+G
Sbjct: 441 LLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKG 481
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 6/229 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GYV F+EA+ + +M RG +PD F LL C + ++ G+ IH V +
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLG 162
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D V +LI MY + G +E S VF L+ K ASW+S++ A G ++ L LF
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 121 AM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M + K ++ ++ L AC++ G + G + H + + N+ +D+ +
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSI-HGFLLRNISELNIIVQTSLVDMYVK 281
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
G L +A + K+ + + Y A++S +G + R+ + +
Sbjct: 282 CGCLDKALHIFQKMEKRNNLT----YSAMISGLALHGEGESALRMFSKM 326
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 174/285 (61%), Gaps = 4/285 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY Q ++ +F M + ++P+ V ++L C+Q G+++ G+ +H + I
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V +AL++MY+K+G ++ + ++F+ KE+++ ++T++I G +G +A+ LF
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+M++ G KPD +TF+ VLSACS++GL++EG K+F M Y+I+P+ EHY C D+LGR
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX-- 238
G ++EA E V L ++ + I L+G+LL +C+ +G +++ E ++ L
Sbjct: 672 GRVNEAYEFVKGLGEEGN--IAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGY 729
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGN 283
+YA +W+ V+KVR M++ G+KK G S I++ GY N
Sbjct: 730 EVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVN 774
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/225 (32%), Positives = 116/225 (51%), Gaps = 11/225 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ +VQ DE + L +MQ +G K D V ALL+ + E G+ H ++I
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVF--NGLKEKDTASWTSIICGLAMNGKTNKALEL 118
I + + + LI+MY+KSG + S ++F +G E+D A+W S+I G NG T K +
Sbjct: 450 IQFEGM-NSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M + +P+ VT ++L ACS G V+ G++L H S + ++ N+ +D+
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL-HGFSIRQYLDQNVFVASALVDMYS 567
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGER 223
+AG + AE++ QT E Y ++ YG MGER
Sbjct: 568 KAGAIKYAEDMF----SQTKERNSVTYTTMILG---YGQHGMGER 605
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 9/193 (4%)
Query: 1 MINGYVQFNRFDEAIALFGD-MQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI YVQ + E+I LF + + + + D+ + + + +E GR H +V +N
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ V+ +L+ MY++ G V KS VF ++E+D SW ++I NG ++ L L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC---FIDL 176
M+K G K D +T +LSA S+ E G++ + + I+ ++ G ID+
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQ-----THAFLIRQGIQFEGMNSYLIDM 462
Query: 177 LGRAGLLHEAEEL 189
++GL+ +++L
Sbjct: 463 YSKSGLIRISQKL 475
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 8/191 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE-- 58
+I+ YV+ R EA FG M VKP V + + S +++ + +++
Sbjct: 185 LISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLG 244
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ + D V ++ I MYA+ G +E S VF+ E++ W ++I N +++EL
Sbjct: 245 DEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIEL 304
Query: 119 FEAMEKLGAK---PDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
F +E +G+K D+VT++ SA S VE GR+ FH SK + + +
Sbjct: 305 F--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQ-FHGFVSKNFRELPIVIVNSLMV 361
Query: 176 LLGRAGLLHEA 186
+ R G +H++
Sbjct: 362 MYSRCGSVHKS 372
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 8/150 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG--VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
+I G++ N EA+ + M+ D + + L CA++ L+ G+ +H ++I
Sbjct: 76 IIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIR 135
Query: 59 NRIMVDTVVGTALIEMYAK----SGCVEKSL--EVFNGLKEKDTASWTSIICGLAMNGKT 112
VV +L+ MY C E + +VF+ ++ K+ +W ++I G+
Sbjct: 136 CLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRN 195
Query: 113 NKALELFEAMEKLGAKPDDVTFITVLSACS 142
+A F M ++ KP V+F+ V A S
Sbjct: 196 AEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 198 bits (503), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 172/296 (58%), Gaps = 3/296 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ Q ++ AI+ + +M +G+KP+++ + A+L+ C++SGAL G IH Y+++N
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNG 323
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I +D +GTAL++MYAK G ++ + VF+ + KD SWT++I G A++G+ ++A++ F
Sbjct: 324 IKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G KPD+V F+ VL+AC ++ V+ G F SM Y I+P L+HY +DLLGRA
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L+EA ELV +P D + + AL AC+ + E ++ L
Sbjct: 444 GKLNEAHELVENMPINPD---LTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYI 500
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
+AS +DV K R ++ ++ G+S I+L+G N G +SH LT+
Sbjct: 501 FLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQ 556
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 66/219 (30%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G + RF+ ++ F M GVKPD+ +L ++ G GR +H ++N
Sbjct: 97 LIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNF 156
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVF-------------------NG----------- 90
+ D+ V +L++MYAK+G ++ + +VF NG
Sbjct: 157 VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMAT 216
Query: 91 -----LKEKDTASWTSIICGLAMNGKTNKALELFEAME---------------------- 123
+ E+++ SW+++I G +G+ N+A +LFE M
Sbjct: 217 TLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYET 276
Query: 124 ---------KLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+ G KP++ T VLSACS +G + G ++
Sbjct: 277 AISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 97/206 (47%), Gaps = 11/206 (5%)
Query: 24 RGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEK 83
R PD+ ++L+ C + +L H +H ++ R ++ + V L+ + +
Sbjct: 23 RQASPDESHFISLIHACKDTASLRH---VHAQILR-RGVLSSRVAAQLVSCSSLLKSPDY 78
Query: 84 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSH 143
SL +F +E++ ++I GL N + ++ F M +LG KPD +TF VL + S
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 144 AGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVP 203
G GR L H+ + K + + +D+ + G L A ++ + PD+ + +
Sbjct: 139 LGFRWLGRAL-HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 204 LYGALLSA-CRTYGNIDMGERLATTL 228
++ L++ CR DM +ATTL
Sbjct: 198 IWNVLINGYCRAK---DM--HMATTL 218
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 197 bits (501), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/283 (38%), Positives = 156/283 (55%), Gaps = 9/283 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDY---V 56
+I GY Q R E + F M G V P+ + +L+ CA+ GA + G+W+H Y +
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL 217
Query: 57 IENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKAL 116
N+ VD V ALI+MY K G +E ++EVF G+K +D SW ++I GLA +G +AL
Sbjct: 218 GYNK--VDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEAL 275
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF M+ G PD VTF+ VL AC H GLVE+G F+SM + + I P +EH GC +DL
Sbjct: 276 NLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDL 335
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXX 236
L RAG L +A E + K+P + D +I + LL A + Y +D+GE L
Sbjct: 336 LSRAGFLTQAVEFINKMPVKADAVI---WATLLGASKVYKKVDIGEVALEELIKLEPRNP 392
Query: 237 XXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
IY A R++D +++ M+D G KK G S I+ +
Sbjct: 393 ANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETD 435
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 13/192 (6%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVV--ALLTGCAQSGALEHGRWIHDYVIE 58
MINGY+ A F + P++ IV+ +++G + G + R + D +
Sbjct: 65 MINGYLLNKDLVSARRYFD------LSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPC 118
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+M V +E YA G +E VF+ + E++ SW +I G A NG+ ++ L
Sbjct: 119 RDVMSWNTV----LEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGS 174
Query: 119 FEAMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
F+ M G+ P+D T VLSAC+ G + G+ + + + K ++ ID+
Sbjct: 175 FKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMY 234
Query: 178 GRAGLLHEAEEL 189
G+ G + A E+
Sbjct: 235 GKCGAIEIAMEV 246
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 197 bits (501), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/278 (37%), Positives = 158/278 (56%), Gaps = 3/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ + R EA LF M + P++ + A+L C+ G+L HG+ +H Y+I N
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG 342
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I +D V T+ I+MYA+ G ++ + VF+ + E++ SW+S+I +NG +AL+ F
Sbjct: 343 IEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFH 402
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ P+ VTF+++LSACSH+G V+EG K F SM+ Y + P EHY C +DLLGRA
Sbjct: 403 KMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRA 462
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G + EA+ + +P + + +GALLSACR + +D+ +A L
Sbjct: 463 GEIGEAKSFIDNMPVKP---MASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYV 519
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
IYA A WE VN VR KM G +K G S+ ++
Sbjct: 520 LLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ GY+++++ E LF M+ G+ D ++ L+ C A + G+ +H I R
Sbjct: 181 LMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIR-R 239
Query: 61 IMVDT--VVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+D + ++I+MY K ++ + ++F +++ WT++I G A + +A +L
Sbjct: 240 SFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDL 299
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M + P+ T +L +CS G + G+ + H + I+ + ++ FID+
Sbjct: 300 FRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSV-HGYMIRNGIEMDAVNFTSFIDMYA 358
Query: 179 RAGLLHEAEELVMKLPDQT 197
R G + A + +P++
Sbjct: 359 RCGNIQMARTVFDMMPERN 377
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
+ + + L+ M+ D F +V + C G LE+G IH ++N + D V +
Sbjct: 90 YSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPS 149
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
L+EMYA+ G +E + +VF+ + +++ W ++ G K + LF M G D
Sbjct: 150 LVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALD 209
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHY-GCFIDLLGRAGLLHEAEEL 189
+T I ++ AC + + G K H +S + ++ ID+ + LL A +L
Sbjct: 210 ALTLICLVKACGNVFAGKVG-KCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKL 268
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 35 ALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-- 92
ALLT +Q+ L H + +H VI + + V+G++L Y +S ++ + FN +
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 93 EKDTASWTSIICGLAMNGKT---NKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
+++ SW +I+ G + KT + L L+ M + D + + AC GL+E
Sbjct: 69 KRNRHSWNTILSGYS-KSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
G L H ++ K + + +++ + G + A+++ ++P + L+G L+
Sbjct: 128 G-ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS----VLWGVLM 182
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 197 bits (500), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 164/281 (58%), Gaps = 4/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++GY + ++A+++F M + P++ + L C+ G L+ G+ +H ++
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG 356
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D VG +L+ MY+ SG V ++ VF + +K SW SII G A +G+ A +F
Sbjct: 357 LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKY-HIKPNLEHYGCFIDLLGR 179
M +L +PD++TF +LSACSH G +E+GRKLF+ MSS HI ++HY C +D+LGR
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G L EAEEL+ ++ + +E++ + ALLSACR + ++D GE+ A +
Sbjct: 477 CGKLKEAEELIERMVVKPNEMV---WLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAY 533
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
IYASA RW +V+K+R KMK GI K PG S + + G
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRG 574
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 31/171 (18%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGV-------------------------KPDKFIV-- 33
MI GY + NR +A+ LF +M VR V P++ +V
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSW 131
Query: 34 VALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE 93
A++ GC +SG ++ + + + DT +++ Y + G V+ +L++F +
Sbjct: 132 TAMVNGCFRSGKVDQA----ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPG 187
Query: 94 KDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHA 144
K+ SWT++ICGL N ++ +AL+LF+ M + K F V++AC++A
Sbjct: 188 KNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANA 238
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 105/216 (48%), Gaps = 5/216 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G Q R EA+ LF +M +K ++T CA + A G +H +I+
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLG 255
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V +LI YA + S +VF+ + A WT+++ G ++N K AL +F
Sbjct: 256 FLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFS 315
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + P+ TF + L++CS G ++ G+++ H ++ K ++ + + + +
Sbjct: 316 GMLRNSILPNQSTFASGLNSCSALGTLDWGKEM-HGVAVKLGLETDAFVGNSLVVMYSDS 374
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
G +++A + +K+ ++ + + +++ C +G
Sbjct: 375 GNVNDAVSVFIKIFKKS----IVSWNSIIVGCAQHG 406
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Query: 69 TALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAK 128
T +I Y +S + +L +F+ + +D SW S+I G G N A++LF+ M +
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSV- 128
Query: 129 PDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
V++ +++ C +G V++ +LF+ M K
Sbjct: 129 ---VSWTAMVNGCFRSGKVDQAERLFYQMPVK 157
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 161/295 (54%), Gaps = 4/295 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGA-LEHGRWIHDYVIEN 59
M+ GY Q + AI +FG++ G+KP++F ++L CA + A + G+ H + I++
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
R+ V +AL+ MYAK G +E + EVF +EKD SW S+I G A +G+ KAL++F
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M+K K D VTFI V +AC+HAGLVEEG K F M I P EH C +DL R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG L +A +++ +P+ I + +L+ACR + ++G A +
Sbjct: 645 AGQLEKAMKVIENMPNPAGSTI---WRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAY 701
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSL 294
+YA + W++ KVR M + +KK PGYS I+++ S G SH L
Sbjct: 702 VLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPL 756
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 107/192 (55%), Gaps = 4/192 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G++Q + +EA+ LF +M+ +GV+P++F +LT E +H V++
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQVVKTN 423
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VGTAL++ Y K G VE++ +VF+G+ +KD +W++++ G A G+T A+++F
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFG 483
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+ K G KP++ TF ++L+ C+ K FH + K + +L + + +
Sbjct: 484 ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKK 543
Query: 181 GLLHEAEELVMK 192
G + AEE+ +
Sbjct: 544 GNIESAEEVFKR 555
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY + + DE + LF MQ G +P+ F A L A+ G G +H V++N
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +LI +Y K G V K+ +F+ + K +W S+I G A NG +AL +F
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 121 AMEKLGAKPDDVTFITVLSACSH 143
+M + + +F +V+ C++
Sbjct: 285 SMRLNYVRLSESSFASVIKLCAN 307
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 102/210 (48%), Gaps = 5/210 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ G+ + R EA LF ++ G++ D I ++L A GR +H I+
Sbjct: 64 LLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFG 123
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D VGT+L++ Y K + +VF+ +KE++ +WT++I G A N ++ L LF
Sbjct: 124 FLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFM 183
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G +P+ TF L + G+ G ++ H++ K + + I+L +
Sbjct: 184 RMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV-HTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
G + +A L D+T+ V + +++S
Sbjct: 243 GNVRKARILF----DKTEVKSVVTWNSMIS 268
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 1 MINGYVQFNRFD-EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GY N D EA+ +F M++ V+ + +++ CA L +H V++
Sbjct: 266 MISGYAA-NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKY 324
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALEL 118
+ D + TAL+ Y+K + +L +F + + SWT++I G N +A++L
Sbjct: 325 GFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDL 384
Query: 119 FEAMEKLGAKPDDVTFITVLSA 140
F M++ G +P++ T+ +L+A
Sbjct: 385 FSEMKRKGVRPNEFTYSVILTA 406
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 165/281 (58%), Gaps = 4/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
M+ GYVQ EA+ +F DM+ + PD +V +L AQ G L +H Y++E
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEK 379
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ + +G ALI+MY+K G ++ ++ VF G++ K W ++I GLA++G A ++
Sbjct: 380 QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDML 439
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+E+L KPDD+TF+ VL+ACSH+GLV+EG F M K+ I+P L+HYGC +D+L R
Sbjct: 440 LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSR 499
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
+G + A+ L+ ++P + +++I + L+AC + + GE +A L
Sbjct: 500 SGSIELAKNLIEEMPVEPNDVI---WRTFLTACSHHKEFETGELVAKHLILQAGYNPSSY 556
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+YAS W+DV +VR+ MK+ I+K+PG S I+L+G
Sbjct: 557 VLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDG 597
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 14/149 (9%)
Query: 1 MINGYVQFNR-FDEAIALFGDMQVRGVKPDKFIVV--ALLTGCAQSGALEHGRWIHDYVI 57
MI+GY Q + D A LF DM P+K ++ +++ G + G +E + + D V+
Sbjct: 226 MISGYAQTSDGVDIASKLFADM------PEKDLISWNSMIDGYVKHGRIEDAKGLFD-VM 278
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
R D V +I+ YAK G V + +F+ + +D ++ S++ G N +ALE
Sbjct: 279 PRR---DVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALE 335
Query: 118 LFEAMEKLG-AKPDDVTFITVLSACSHAG 145
+F MEK PDD T + VL A + G
Sbjct: 336 IFSDMEKESHLLPDDTTLVIVLPAIAQLG 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 35/202 (17%)
Query: 25 GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKS 84
GV DKF + +L C++ G ++ G IH ++ + + D + LI +Y K GC+ S
Sbjct: 116 GVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLS 175
Query: 85 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM---------------------- 122
++F+ + ++D+ S+ S+I G G A ELF+ M
Sbjct: 176 RQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSD 235
Query: 123 -----EKLGA---KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFI 174
KL A + D +++ +++ G +E+ + LF M + ++ + I
Sbjct: 236 GVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRR-----DVVTWATMI 290
Query: 175 DLLGRAGLLHEAEELVMKLPDQ 196
D + G +H A+ L ++P +
Sbjct: 291 DGYAKLGFVHHAKTLFDQMPHR 312
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 164/294 (55%), Gaps = 4/294 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++G+ Q ++EA+ + +M+ GV PD+ V +L C+ +L GR IH +
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELF 119
+D + LI+MYAK G ++ S +VF+ ++ + + SW S+I G A NG AL++F
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIF 822
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
++M + PD++TF+ VL+ACSHAG V +GRK+F M +Y I+ ++H C +DLLGR
Sbjct: 823 DSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGR 882
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G L EA++ + + D L+ +LL ACR +G+ GE A L
Sbjct: 883 WGYLQEADDFIEAQNLKPD---ARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAY 939
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHS 293
IYAS WE N +R M+D G+KKVPGYS ID+E + G SHS
Sbjct: 940 VLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHS 993
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 101/195 (51%), Gaps = 1/195 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY + + LF DM+ G D F +LL+ CA S LE G H +I+ +
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VG AL++MYAK G +E + ++F + ++D +W +II + ++A +LF+
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G D + L AC+H + +G+++ H +S K + +L ID+ +
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 181 GLLHEAEELVMKLPD 195
G++ +A ++ LP+
Sbjct: 578 GIIKDARKVFSSLPE 592
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 107/198 (54%), Gaps = 1/198 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G+ + AI F +M+ VK + + ++L+ L+ G +H I+
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VG++L+ MY+K +E + +VF L+EK+ W ++I G A NG+++K +ELF
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 417
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G DD TF ++LS C+ + +E G + FHS+ K + NL +D+ +
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 181 GLLHEAEELVMKLPDQTD 198
G L +A ++ ++ D+ +
Sbjct: 477 GALEDARQIFERMCDRDN 494
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 106/221 (47%), Gaps = 5/221 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++ Y + + + F + + P+KF +L+ CA+ +E GR IH +I+
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ++ G AL++MYAK + + VF + + +T WT + G G +A+ +FE
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G +PD + F+TV++ G +++ R LF MSS P++ + I G+
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKR 305
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMG 221
G A E + + + G++LSA N+D+G
Sbjct: 306 GCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 91/185 (49%), Gaps = 8/185 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q N +EA+ LF +M RGV P + ++ C + +L G H + +
Sbjct: 601 LIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659
Query: 61 IMVD-TVVGTALIEMYAKSGCVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALEL 118
+ +G +L+ MY S + ++ +F+ L K WT ++ G + NG +AL+
Sbjct: 660 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 719
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHY--GCFIDL 176
++ M G PD TF+TVL CS + EGR + HS+ +H+ +L+ ID+
Sbjct: 720 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI-HSLI--FHLAHDLDELTSNTLIDM 776
Query: 177 LGRAG 181
+ G
Sbjct: 777 YAKCG 781
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 4/178 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I YVQ EA LF M + G+ D + + L C L G+ +H ++
Sbjct: 500 IIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG 559
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D G++LI+MY+K G ++ + +VF+ L E S ++I G + N +A+ LF+
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVVLFQ 618
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
M G P ++TF T++ AC + G + FH +K E+ G I LLG
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQ-FHGQITKRGFSSEGEYLG--ISLLG 673
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 45 ALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIIC 104
AL G+ +H + I + +G A++++YAK V + + F+ L EKD +W S++
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 105 GLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIK 164
+ GK K L F ++ + P+ TF VLS C+ VE GR++ SM IK
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-----IK 188
Query: 165 PNLEHY----GCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSA 211
LE G +D+ + + +A + + D L+ + A
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKA 239
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 104/269 (38%), Gaps = 14/269 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ +GYV+ +EA+ +F M+ G +PD V ++ + G L+ R + +
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSP- 290
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTS----IICGLAMNGKTNKAL 116
D V +I + K GC ++E F +++ S S ++ + + + L
Sbjct: 291 ---DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+ KLG + +++S S +E K+F ++ K N + I
Sbjct: 348 VVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEK-----NDVFWNAMIRG 402
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXX 236
G H+ EL M + I + +LLS C +++MG + + +
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462
Query: 237 XXX-XXXXXIYASADRWEDVNKVRSKMKD 264
+YA ED ++ +M D
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCD 491
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 106/270 (39%), Positives = 157/270 (58%), Gaps = 3/270 (1%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
R D+++ F MQ V + + +L+ CA+ AL GR IH +VI + + +V
Sbjct: 414 RGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQN 473
Query: 70 ALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKP 129
AL+ MYAK G + + VF +++KD SW SII G M+G KAL +F+ M G P
Sbjct: 474 ALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHP 533
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
D + + VLSACSHAGLVE+GR++F+SMS ++ ++P EHY C +DLLGR G L EA E+
Sbjct: 534 DGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
Query: 190 VMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASA 249
V +P + V + GALL++CR + N+D+ E +A+ L IY++
Sbjct: 594 VKNMPMEPK---VCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAG 650
Query: 250 DRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
RWE+ VR+ K +KKV G S I+++
Sbjct: 651 GRWEESANVRALAKKKDLKKVSGSSWIEVK 680
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
++ A+ L+ M+ RG+ D +I+ +L C G R H VI+ + + V
Sbjct: 139 YENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNE 198
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
L+ +Y K+G + + +F + ++ SW +I G + A+++FE M++ KPD
Sbjct: 199 LLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPD 258
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSM 157
+VT+ +VLS S G E+ K FH M
Sbjct: 259 EVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ + Q +F++ + F M++ G + + CA+ AL +H YVI+
Sbjct: 265 VLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGG 324
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
ALI +Y K G V+ + +F ++ K SW S+I GK ++AL LF
Sbjct: 325 FEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFS 384
Query: 121 AMEKL----GAKPDDVTFITVLSACSHAGLVEEGRKLFHSM 157
+E++ K + VT+ +V+ C+ G ++ + F M
Sbjct: 385 ELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/282 (37%), Positives = 163/282 (57%), Gaps = 8/282 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q D+AI F +MQ G +PD V ++L+ CAQSG L+ GR +H +
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG 304
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I ++ V ALI+MYAK G +E + VF + + A S+I LA++GK +ALE+F
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFS 364
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
ME L KPD++TFI VL+AC H G + EG K+F M ++ +KPN++H+GC I LLGR+
Sbjct: 365 TMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRS 423
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGER----LATTLXXXXXXXX 236
G L EA LV ++ + ++ ++ GALL AC+ + + +M E+ + T
Sbjct: 424 GKLKEAYRLVKEMHVKPNDTVL---GALLGACKVHMDTEMAEQVMKIIETAGSITNSYSE 480
Query: 237 XXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
+YA +RW+ +R +M+ G++K PG SS+ L
Sbjct: 481 NHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSLVL 522
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
+A+ L+G ++ RGV ++ + L + G+ +H I+ + D +VG++LI
Sbjct: 29 QALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLI 88
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
MY K GCV + +VF+ + E++ A+W ++I G NG A LF E++ + V
Sbjct: 89 SMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLF---EEISVCRNTV 145
Query: 133 TFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMK 192
T+I ++ +E+ R+LF M + +K N++ + + + + +A +
Sbjct: 146 TWIEMIKGYGKRIEIEKARELFERMP--FELK-NVKAWSVMLGVYVNNRKMEDARKFFED 202
Query: 193 LPDQT 197
+P++
Sbjct: 203 IPEKN 207
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 11/188 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDM--QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
MI GY + ++A LF M +++ VK +L + +E R + + E
Sbjct: 150 MIKGYGKRIEIEKARELFERMPFELKNVKAWS----VMLGVYVNNRKMEDARKFFEDIPE 205
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ V + ++ Y + G V ++ +F + +D W ++I G A NG ++ A++
Sbjct: 206 K----NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M+ G +PD VT ++LSAC+ +G ++ GR++ HS+ + I+ N ID+
Sbjct: 262 FFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREV-HSLINHRGIELNQFVSNALIDMYA 320
Query: 179 RAGLLHEA 186
+ G L A
Sbjct: 321 KCGDLENA 328
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 161/279 (57%), Gaps = 3/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y + +R+ E +LF ++ +P+++ +L CA E G+ +H Y+
Sbjct: 290 MIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVG 349
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ++L++MY K G +E + V +G + D SWTS+I G A NG+ ++AL+ F+
Sbjct: 350 FDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD 409
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+ K G KPD VTF+ VLSAC+HAGLVE+G + F+S++ K+ + +HY C +DLL R+
Sbjct: 410 LLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARS 469
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G + + ++ ++P + + L+ ++L C TYGNID+ E A L
Sbjct: 470 GRFEQLKSVISEMPMKPSKF---LWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYV 526
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
IYA+A +WE+ K+R +M+++G+ K PG S +++
Sbjct: 527 TMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIK 565
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 109/220 (49%), Gaps = 6/220 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQ-VRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
M+ GYV+ ++ +EA+ L+ MQ V +P+ F V + A + G+ IH +++
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ D V+ ++L++MY K GC++++ +F+ + EKD SWTS+I + + + LF
Sbjct: 248 GLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLF 307
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ +P++ TF VL+AC+ E G+++ H ++ P +D+ +
Sbjct: 308 SELVGSCERPNEYTFAGVLNACADLTTEELGKQV-HGYMTRVGFDPYSFASSSLVDMYTK 366
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
G + A+ +V P + + +L+ C G D
Sbjct: 367 CGNIESAKHVVDGCPKPD----LVSWTSLIGGCAQNGQPD 402
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 9 NRFDEAIALFGDMQV---------RGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
NRF EAI + ++ R KP L+ C+Q+ ALE G+ +H+++ +
Sbjct: 55 NRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTS 114
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ V+ L+ MYAK G + + +VF+ + +D SW ++ G A G +A +LF
Sbjct: 115 GFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLF 174
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNL 167
+ M + D ++ +++ EE L+ M + +PN+
Sbjct: 175 DEM----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI 218
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 164/281 (58%), Gaps = 4/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY Q N+ +EA L +M V G +P+ + ++L CA+ L+HG+ H Y++ +
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 61 IMVD-TVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D T++ +L+++YAKSG + + +V + + ++D ++TS+I G G+ AL LF
Sbjct: 412 CFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALF 471
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M + G KPD VT + VLSACSH+ LV EG +LF M +Y I+P L+H+ C +DL GR
Sbjct: 472 KEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGR 531
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG L +A++++ +P + + LL+AC +GN +G+ A L
Sbjct: 532 AGFLAKAKDIIHNMPYKPSG---ATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYY 588
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+YA+A W + +VR+ M+DLG+KK PG + ID +
Sbjct: 589 VLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDS 629
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 70/145 (48%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I Y + F+E IA + M +G++PD F ++L C ++ + GR +H + +
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSS 174
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V ALI MY + + + +F+ + E+D SW ++I A G ++A ELF+
Sbjct: 175 YKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFD 234
Query: 121 AMEKLGAKPDDVTFITVLSACSHAG 145
M G + +T+ + C G
Sbjct: 235 KMWFSGVEVSVITWNIISGGCLQTG 259
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 97/215 (45%), Gaps = 9/215 (4%)
Query: 4 GYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIM- 62
G +Q + A+ L M+ D ++ L C+ GA+ G+ IH I +
Sbjct: 254 GCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDG 313
Query: 63 VDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 122
+D V T LI MY+K + +L VF +E +W SII G A K+ +A L M
Sbjct: 314 IDNVRNT-LITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREM 372
Query: 123 EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGL 182
G +P+ +T ++L C+ ++ G++ + + K + +D+ ++G
Sbjct: 373 LVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGK 432
Query: 183 LHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGN 217
+ A++ V L + DE+ Y +L+ YGN
Sbjct: 433 IVAAKQ-VSDLMSKRDEVT---YTSLIDG---YGN 460
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 195 bits (495), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 156/280 (55%), Gaps = 4/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Q + AI +F M V G+ D + A L+ CA + G+ IH ++I++
Sbjct: 513 MITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHS 572
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF- 119
+ D + LI+MYAK G ++ ++ VF +KEK+ SW SII +GK +L LF
Sbjct: 573 LASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFH 632
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
E +EK G +PD +TF+ ++S+C H G V+EG + F SM+ Y I+P EHY C +DL GR
Sbjct: 633 EMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGR 692
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG L EA E V +P D ++G LL ACR + N+++ E ++ L
Sbjct: 693 AGRLTEAYETVKSMPFPPD---AGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYY 749
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
+A+A WE V KVRS MK+ ++K+PGYS I++
Sbjct: 750 VLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEIN 789
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 99/194 (51%), Gaps = 3/194 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GYVQ +E++ F +M GV PD +LL ++ LE+ + IH Y++ +
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I +D + +ALI+ Y K V + +F+ D +T++I G NG +LE+F
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC-FIDLLGR 179
+ K+ P+++T +++L ++ GR+L H K N + GC ID+ +
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGREL-HGFIIKKGFD-NRCNIGCAVIDMYAK 488
Query: 180 AGLLHEAEELVMKL 193
G ++ A E+ +L
Sbjct: 489 CGRMNLAYEIFERL 502
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 107/218 (49%), Gaps = 5/218 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY+ + +++ +F + + P++ +V++L AL+ GR +H ++I+
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+G A+I+MYAK G + + E+F L ++D SW S+I A + + A+++F
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G D V+ LSAC++ E K H K+ + ++ ID+ +
Sbjct: 532 QMGVSGICYDCVSISAALSACANLP-SESFGKAIHGFMIKHSLASDVYSESTLIDMYAKC 590
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNI 218
G L A + + ++ + + ++++AC +G +
Sbjct: 591 GNLKAAMNVFKTMKEKN----IVSWNSIIAACGNHGKL 624
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 98/210 (46%), Gaps = 5/210 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+NGY + D I F M++ + P+ +L+ CA ++ G +H V+ +
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 269
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + + +L+ MY+K G + + ++F + DT +W +I G +G ++L F
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G PD +TF ++L + S +E +++ H ++ I ++ ID +
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQI-HCYIMRHSISLDIFLTSALIDAYFKC 388
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
+ A+ + Q + + V ++ A++S
Sbjct: 389 RGVSMAQNIF----SQCNSVDVVVFTAMIS 414
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ +V+ ++A+A + M GV PD L+ C + ++ D V
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V ++LI+ Y + G ++ ++F+ + +KD W ++ G A G + ++ F
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFS 228
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M P+ VTF VLS C+ L++ G +L
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 36 LLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFN--GLKE 93
LL C+ L G+ +H ++I N I D+ ++ MYA G ++F L+
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 94 KDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
W SII NG N+AL + M G PD TF ++ AC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 156/280 (55%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GY Q R +EA+ +F DMQ G+ PD + + ++ CA +LE G H I +
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ V +L+ +Y K G ++ S +FN + +D SWT+++ A G+ + ++LF+
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD 461
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G KPD VT V+SACS AGLVE+G++ F M+S+Y I P++ HY C IDL R+
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA + +P D I + LLSACR GN+++G+ A +L
Sbjct: 522 GRLEEAMRFINGMPFPPDAI---GWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYT 578
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
IYAS +W+ V ++R M++ +KK PG S I +G
Sbjct: 579 LLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKG 618
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 9/193 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G Q EAI F +M+V+G+K D++ ++L C GA+ G+ IH +I
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
VG+ALI+MY K C+ + VF+ +K+K+ SWT+++ G G+ +A+++F
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHY----GCFIDL 176
M++ G PD T +SAC++ +EEG + FH + I L HY + L
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQ-FHGKA----ITSGLIHYVTVSNSLVTL 415
Query: 177 LGRAGLLHEAEEL 189
G+ G + ++ L
Sbjct: 416 YGKCGDIDDSTRL 428
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 31/198 (15%)
Query: 30 KFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFN 89
+ ++ +L + +G + G+ IH VI+ +VG+ L+ MYA GC+ + +VF
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFY 198
Query: 90 GLK------------------------------EKDTASWTSIICGLAMNGKTNKALELF 119
GL EKD+ SW ++I GLA NG +A+E F
Sbjct: 199 GLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECF 258
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M+ G K D F +VL AC G + EG+++ H+ + + + ++ ID+ +
Sbjct: 259 REMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI-HACIIRTNFQDHIYVGSALIDMYCK 317
Query: 180 AGLLHEAEELVMKLPDQT 197
LH A+ + ++ +
Sbjct: 318 CKCLHYAKTVFDRMKQKN 335
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 194 bits (494), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 109/280 (38%), Positives = 167/280 (59%), Gaps = 7/280 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GY Q A+ LF +M VKPD +V++ + + G+LE G+ HDY+ +
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS 467
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTAS---WTSIICGLAMNGKTNKAL 116
I + + A+I+MYAK G +E +L +F+ K +++ W +IICG A +G AL
Sbjct: 468 TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLAL 527
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+L+ ++ L KP+ +TF+ VLSAC HAGLVE G+ F SM S + I+P+++HYGC +DL
Sbjct: 528 DLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDL 587
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXX 236
LG+AG L EA+E++ K+P + D V ++G LLSA RT+GN+++ E AT L
Sbjct: 588 LGKAGRLEEAKEMIKKMPVKAD---VMIWGMLLSASRTHGNVEIAELAATELAAIDPSHG 644
Query: 237 XXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
+YA A RWEDV VR +M+ ++ +S +
Sbjct: 645 GCKVMLSNVYADAGRWEDVALVREEMRTRDVEWSRAFSGV 684
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 34/260 (13%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G ++ N+ DEA+ + +M G+KP + ++V LL+ A+S G +H +++
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF- 119
+ +I YA S ++ +L+ F + AS ++I G NG +A E+F
Sbjct: 336 FDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD 395
Query: 120 -------------------------------EAMEKLGAKPDDVTFITVLSACSHAGLVE 148
E + KPD +T ++V SA S G +E
Sbjct: 396 QTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGAL 208
EG++ H + I PN ID+ + G + A + + + + I P + A+
Sbjct: 456 EGKRA-HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP-WNAI 513
Query: 209 LSACRTYGNIDMGERLATTL 228
+ T+G+ + L + L
Sbjct: 514 ICGSATHGHAKLALDLYSDL 533
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 105/253 (41%), Gaps = 75/253 (29%)
Query: 33 VVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAK--------------- 77
+V+ L CA S + GR IH V+++ + + + +++ MYAK
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 78 ----------------SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 121
S + +L++F+ + E+ S+T++I G A N + ++A+ELF
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 122 MEKLGAKPDDVTFITVLSACSHAG-----------------------------------L 146
M LG ++VT TV+SACSH G
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 147 VEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYG 206
+++ RKLF M + NL + ++ +AGL+ +AEEL DQ E + +G
Sbjct: 224 LKDARKLFDEMPER-----NLVTWNVMLNGYSKAGLIEQAEELF----DQITEKDIVSWG 274
Query: 207 ALLSACRTYGNID 219
++ C +D
Sbjct: 275 TMIDGCLRKNQLD 287
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 31/184 (16%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVI--- 57
+I GY Q N++ EA+ LF +M+ G+ ++ + +++ C+ G + R + I
Sbjct: 144 LIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLK 203
Query: 58 -ENRIMVDT---------------------------VVGTALIEMYAKSGCVEKSLEVFN 89
E R+ V T V ++ Y+K+G +E++ E+F+
Sbjct: 204 LEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFD 263
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
+ EKD SW ++I G + ++AL + M + G KP +V + +LSA + + +
Sbjct: 264 QITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSK 323
Query: 150 GRKL 153
G +L
Sbjct: 324 GLQL 327
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/298 (36%), Positives = 166/298 (55%), Gaps = 5/298 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ YVQ + ++A L+ + V+ F++ ++L+ CA LE GR IH + ++
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC 340
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VG+AL++MY K GC+E S + F+ + EK+ + S+I G A G+ + AL LFE
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400
Query: 121 AMEK--LGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
M G P+ +TF+++LSACS AG VE G K+F SM S Y I+P EHY C +D+LG
Sbjct: 401 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLG 460
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG++ A E + K+P Q + ++GAL +ACR +G +G A L
Sbjct: 461 RAGMVERAYEFIKKMPIQP---TISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGN 517
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
+A+A RW + N VR ++K +GIKK GYS I ++ ++ SH L K
Sbjct: 518 HVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNK 575
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 1/187 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G Q F A+ F +M+ GV P+ F A G+ IH ++
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++D VG + +MY K+ + + ++F+ + E++ +W + I +G+ +A+E F
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
++ P+ +TF L+ACS + G +L H + + ++ ID G+
Sbjct: 199 EFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL-HGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 181 GLLHEAE 187
+ +E
Sbjct: 258 KQIRSSE 264
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 1/197 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
I+ V R EAI F + + P+ A L C+ L G +H V+ +
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 239
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V LI+ Y K + S +F + K+ SW S++ N + KA L+
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
K + D +VLSAC+ +E GR + H+ + K ++ + +D+ G+
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSI-HAHAVKACVERTIFVGSALVDMYGKC 358
Query: 181 GLLHEAEELVMKLPDQT 197
G + ++E+ ++P++
Sbjct: 359 GCIEDSEQAFDEMPEKN 375
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 36 LLTGCAQSGALEHGRWIHDYVIENRIMVDT----VVGTALIEMYAKSGCVEKSLEVFNGL 91
LL + ++ GR +H +++ +D+ + LI MY+K E + V
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKT---LDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 92 KEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGR 151
++ SWTS+I GLA NG + AL F M + G P+D TF A + L G+
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 152 KLFHSMSSKYHIKPNLEHYGC-FIDLLGRAGLLHEAEELVMKLPDQTDE 199
++ H+++ K ++ GC D+ + L +A +L ++P++ E
Sbjct: 129 QI-HALAVKCGRILDV-FVGCSAFDMYCKTRLRDDARKLFDEIPERNLE 175
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 156/274 (56%), Gaps = 5/274 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDM--QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
MI Y + + EA+ F +M + + P+ +V++L CA ALE G+ IH Y++
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ V +AL+ MY + G +E VF+ + ++D SW S+I ++G KA+++
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
FE M GA P VTF++VL ACSH GLVEEG++LF +M + IKP +EHY C +DLLG
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RA L EA ++V D E ++G+LL +CR +GN+++ ER + L
Sbjct: 434 RANRLDEAAKMVQ---DMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGN 490
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPG 272
IYA A W++V +V+ ++ G++K+PG
Sbjct: 491 YVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPG 524
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQS----GALEHGRWIHDYVIENRIMVDTVV 67
+E + L+ M GV+ D+F +L C S L G+ IH ++ +
Sbjct: 160 EEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYI 219
Query: 68 GTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--EKL 125
T L++MYA+ GCV+ + VF G+ ++ SW+++I A NGK +AL F M E
Sbjct: 220 MTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETK 279
Query: 126 GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHE 185
+ P+ VT ++VL AC+ +E+G KL H + + L + + GR G L
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLEV 338
Query: 186 AEELVMKLPDQ 196
+ + ++ D+
Sbjct: 339 GQRVFDRMHDR 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%)
Query: 28 PDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEV 87
P + L+ C +L +H ++++N D + T LI MY+ G V+ + +V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 88 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
F+ +++ W ++ L + G + L L+ M ++G + D T+ VL AC
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKAC 188
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 192 bits (489), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/279 (37%), Positives = 159/279 (56%), Gaps = 6/279 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQ-VRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI GY Q + E I LF +MQ + PD ++++L + +GAL G W H +V
Sbjct: 244 MIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK 303
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
++ V TA+++MY+K G +EK+ +F+ + EK ASW ++I G A+NG AL+LF
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M + KPD++T + V++AC+H GLVEEGRK FH M + + +EHYGC +DLLGR
Sbjct: 364 VTM-MIEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGR 421
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG L EAE+L+ +P + + II+ + LSAC Y +I+ ER+
Sbjct: 422 AGSLKEAEDLITNMPFEPNGIIL---SSFLSACGQYKDIERAERILKKAVELEPQNDGNY 478
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
+YA+ RW+D V++ M+ KK G S I++
Sbjct: 479 VLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEI 517
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 97/197 (49%), Gaps = 9/197 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY++ D A LF Q+ VK D I A++ G +SG + R + D +
Sbjct: 150 LISGYIRCGELDLASKLFD--QMPHVK-DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKT 206
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + T +I Y ++ + ++F+ + E++ SW ++I G N + + + LF+
Sbjct: 207 V----ITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQ 262
Query: 121 AMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M+ + PDDVT ++VL A S G + G + H + + ++ +D+ +
Sbjct: 263 EMQATTSLDPDDVTILSVLPAISDTGALSLG-EWCHCFVQRKKLDKKVKVCTAILDMYSK 321
Query: 180 AGLLHEAEELVMKLPDQ 196
G + +A+ + ++P++
Sbjct: 322 CGEIEKAKRIFDEMPEK 338
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGV-KPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI Y++ ++ ++ AL+ D++ PD F L C+ S + G +H +
Sbjct: 48 MIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRF 107
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D V T +++MYAK G + + F+ + + SWT++I G G+ + A +LF
Sbjct: 108 GFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLF 167
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
+ M + D V + ++ +G + R+LF M+ K
Sbjct: 168 DQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEMTHK 205
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 106/276 (38%), Positives = 158/276 (57%), Gaps = 5/276 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQV-RGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+G+ Q + EA+ +F M+ + VKP+ VV++L CA G LE GR + Y EN
Sbjct: 185 VISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN 244
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGL-KEKDTASWTSIICGLAMNGKTNKALEL 118
+ V A IEMY+K G ++ + +F L +++ SW S+I LA +GK ++AL L
Sbjct: 245 GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTL 304
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M + G KPD VTF+ +L AC H G+V +G++LF SM + I P LEHYGC IDLLG
Sbjct: 305 FAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLG 364
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
R G L EA +L+ +P + D ++ +G LL AC +GN+++ E + L
Sbjct: 365 RVGKLQEAYDLIKTMPMKPDAVV---WGTLLGACSFHGNVEIAEIASEALFKLEPTNPGN 421
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYS 274
IYA+ ++W+ V ++R MK + K GYS
Sbjct: 422 CVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYS 457
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I Y ++ E+I L+ + G++P + A + R +H +
Sbjct: 53 LIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSG 112
Query: 61 IMVDTVVGTALIEMYAKSG---CVEK----------------------------SLEVFN 89
D+ T LI YAK G C + ++E+F+
Sbjct: 113 FESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFD 172
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEK-LGAKPDDVTFITVLSACSHAGLVE 148
+ K+ SWT++I G + NG ++AL++F MEK KP+ +T ++VL AC++ G +E
Sbjct: 173 SMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGAL 208
GR+L + + N+ I++ + G++ A+ L +L +Q + + + ++
Sbjct: 233 IGRRL-EGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN---LCSWNSM 288
Query: 209 LSACRTYGNID 219
+ + T+G D
Sbjct: 289 IGSLATHGKHD 299
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 191 bits (486), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 158/276 (57%), Gaps = 5/276 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G R +EA+ +F DM+ G++PD F +V++ C G L +H V++ +
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAK 248
Query: 61 I--MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
D ++ +LI+MY K G ++ + +F +++++ SW+S+I G A NG T +ALE
Sbjct: 249 TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALEC 308
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M + G +P+ +TF+ VLSAC H GLVEEG+ F M S++ ++P L HYGC +DLL
Sbjct: 309 FRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLS 368
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
R G L EA+++V ++P + + V ++G L+ C +G+++M E +A +
Sbjct: 369 RDGQLKEAKKVVEEMPMKPN---VMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGV 425
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYS 274
+YA W+DV +VR MK + K+P YS
Sbjct: 426 YVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 92/190 (48%), Gaps = 1/190 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ Y++ +AI ++ M V PD++ + ++ Q G+ +H +
Sbjct: 88 IMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLG 147
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D + I +Y K+G E + +VF+ E+ SW +II GL G+ N+A+E+F
Sbjct: 148 FVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFV 207
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHS-MSSKYHIKPNLEHYGCFIDLLGR 179
M++ G +PDD T ++V ++C G + +L + +K K ++ ID+ G+
Sbjct: 208 DMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGK 267
Query: 180 AGLLHEAEEL 189
G + A +
Sbjct: 268 CGRMDLASHI 277
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/280 (35%), Positives = 158/280 (56%), Gaps = 6/280 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDM--QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
MI GY Q ++A+ L +M + +P+ F + L CA AL G+ IH Y +
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 59 NRI-MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
N+ V V LI+MYAK G + + VF+ + K+ +WTS++ G M+G +AL
Sbjct: 506 NQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALG 565
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
+F+ M ++G K D VT + VL ACSH+G++++G + F+ M + + + P EHY C +DLL
Sbjct: 566 IFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLL 625
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXX 237
GRAG L+ A L+ ++P + ++ + A LS CR +G +++GE A +
Sbjct: 626 GRAGRLNAALRLIEEMPMEPPPVV---WVAFLSCCRIHGKVELGEYAAEKITELASNHDG 682
Query: 238 XXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
+YA+A RW+DV ++RS M+ G+KK PG S ++
Sbjct: 683 SYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 106/198 (53%), Gaps = 13/198 (6%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRI 61
I+GY Q EA+ + M G+KP++ ++++L+GCA GAL HG+ IH Y I+ I
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 62 MV-------DTVVGTALIEMYAKSGCVEKSLEVFNGL--KEKDTASWTSIICGLAMNGKT 112
+ + +V LI+MYAK V+ + +F+ L KE+D +WT +I G + +G
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 113 NKALELFEAM--EKLGAKPDDVTFITVLSACSHAGLVEEGRKLF-HSMSSKYHIKPNLEH 169
NKALEL M E +P+ T L AC+ + G+++ +++ ++ + P L
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFV 515
Query: 170 YGCFIDLLGRAGLLHEAE 187
C ID+ + G + +A
Sbjct: 516 SNCLIDMYAKCGSISDAR 533
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 2/167 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVR-GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I Y + + A+ +F M G +PD +V +L CA G G+ +H + + +
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
++ + VG L++MYAK G ++++ VF+ + KD SW +++ G + G+ A+ LF
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPN 166
E M++ K D VT+ +S + GL E + M S IKPN
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS-GIKPN 364
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
++ + LFG M PD + + C + ++ G H + + + VG AL
Sbjct: 109 NKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNAL 168
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-EKLGAKPD 130
+ MY++ + + +VF+ + D SW SII A GK ALE+F M + G +PD
Sbjct: 169 VAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPD 228
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
++T + VL C+ G G++L H + + N+ C +D+ + G++ EA +
Sbjct: 229 NITLVNVLPPCASLGTHSLGKQL-HCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 157/276 (56%), Gaps = 4/276 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M GYVQ +A+F +M G D ++V+LL C Q GAL+HG+ +H + I
Sbjct: 206 MFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRC 265
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +G A+ +MY K ++ + VF + +D SW+S+I G ++G + +LF+
Sbjct: 266 SCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFD 325
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M K G +P+ VTF+ VLSAC+H GLVE+ F M +Y+I P L+HY D + RA
Sbjct: 326 EMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM-QEYNIVPELKHYASVADCMSRA 384
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL EAE+ + +P + DE ++ GA+LS C+ YGN+++GER+A L
Sbjct: 385 GLLEEAEKFLEDMPVKPDEAVM---GAVLSGCKVYGNVEVGERVARELIQLKPRKASYYV 441
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
+Y++A R+++ +R MK+ I KVPG SSI
Sbjct: 442 TLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%)
Query: 26 VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSL 85
V+PD F + +L C+ S + G IH ++ V +AL+ MY G + +
Sbjct: 130 VRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHAR 189
Query: 86 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAG 145
++F+ + +D+ +T++ G G+ L +F M G D V +++L AC G
Sbjct: 190 KLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLG 249
Query: 146 LVEEGRKL 153
++ G+ +
Sbjct: 250 ALKHGKSV 257
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 165/280 (58%), Gaps = 4/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ Q ++A +MQ G +PD +V +L C+Q G+L+ GR +H Y+++
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ D V TAL++MY+K G + S E+F + KD W ++I ++G + + LF
Sbjct: 349 VL-DRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFL 407
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + +PD TF ++LSA SH+GLVE+G+ F M +KY I+P+ +HY C IDLL RA
Sbjct: 408 KMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARA 467
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G + EA +++ ++ D + P++ ALLS C + N+ +G+ A +
Sbjct: 468 GRVEEALDMIN--SEKLDNAL-PIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQT 524
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+A+A++W++V KVR M++ ++KVPGYS+I++ G
Sbjct: 525 LVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNG 564
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ G+ Q + +A+ + +MQ G D+ +++ LL G + GR +H Y+
Sbjct: 188 MVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTG 247
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ++ VV T+L++MYAK G +E + VF+ + K SW S+I G A NG NKA E
Sbjct: 248 LPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVV 307
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ LG +PD VT + VL ACS G ++ GR L H K H+ + +D+ +
Sbjct: 308 EMQSLGFQPDLVTLVGVLVACSQVGSLKTGR-LVHCYILKRHVLDRVTATA-LMDMYSKC 365
Query: 181 GLLHEAEEL 189
G L + E+
Sbjct: 366 GALSSSREI 374
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 88/197 (44%), Gaps = 1/197 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y + DE + L+ M ++PD + C LE G + ++
Sbjct: 87 MIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFG 146
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V ++++ +Y K G ++++ +F + ++D WT+++ G A GK+ KA+E +
Sbjct: 147 YKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYR 206
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G D V + +L A G + GR + H + + N+ +D+ +
Sbjct: 207 EMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSV-HGYLYRTGLPMNVVVETSLVDMYAKV 265
Query: 181 GLLHEAEELVMKLPDQT 197
G + A + ++ +T
Sbjct: 266 GFIEVASRVFSRMMFKT 282
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/292 (33%), Positives = 163/292 (55%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ GYVQ R++EA+ LF M VKP +++ CA L G+ +H YV+
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + +AL++MY+K G ++ + ++F+ + D SWT+II G A++G ++A+ LFE
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ G KP+ V F+ VL+ACSH GLV+E F+SM+ Y + LEHY DLLGRA
Sbjct: 434 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 493
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA + K+ E ++ LLS+C + N+++ E++A +
Sbjct: 494 GKLEEAYNFISKM---CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYV 550
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
+YAS RW+++ K+R +M+ G++K P S I+++ + G SH
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSH 602
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 2/200 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q +++A+ + +M +KPD F + ++L ++ + G+ IH YVI
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG 272
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I D +G++L++MYAKS +E S VF+ L +D SW S++ G NG+ N+AL LF
Sbjct: 273 IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFR 332
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M KP V F +V+ AC+H + G++L H + N+ +D+ +
Sbjct: 333 QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL-HGYVLRGGFGSNIFIASALVDMYSKC 391
Query: 181 GLLHEAEELVMKLPDQTDEI 200
G + A ++ ++ + DE+
Sbjct: 392 GNIKAARKIFDRM-NVLDEV 410
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/294 (36%), Positives = 161/294 (54%), Gaps = 4/294 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GYV+ + A+ LF M GVKP++F + L A +L HG+ IH Y+I
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELF 119
+ + +V ++LI+MY+KSG +E S VF +K D W ++I LA +G +KAL +
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M K +P+ T + +L+ACSH+GLVEEG + F SM+ ++ I P+ EHY C IDLLGR
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG E + ++P + D+ I + A+L CR +GN ++G++ A L
Sbjct: 462 AGCFKELMRKIEEMPFEPDKHI---WNAILGVCRIHGNEELGKKAADELIKLDPESSAPY 518
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHS 293
IYA +WE V K+R MK + K S I++E + V SH+
Sbjct: 519 ILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHA 572
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 112/247 (45%), Gaps = 35/247 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GY Q EA+ + + + G+K ++F LLT C +S L+ R H V+
Sbjct: 150 MVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAG 209
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----------------------------- 91
+ + V+ ++I+ YAK G +E + F+ +
Sbjct: 210 FLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFC 269
Query: 92 --KEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
EK+ SWT++I G G N+AL+LF M LG KP+ TF + L A + +
Sbjct: 270 EMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRH 329
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
G+++ H + +++PN ID+ ++G L EA E V ++ D + + + ++
Sbjct: 330 GKEI-HGYMIRTNVRPNAIVISSLIDMYSKSGSL-EASERVFRICDDKHDCV--FWNTMI 385
Query: 210 SACRTYG 216
SA +G
Sbjct: 386 SALAQHG 392
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 106/246 (43%), Gaps = 37/246 (15%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVI------ENRIMVD 64
+A++ + +G++ ++ +LL C + +L+ G+WIH ++ N ++ +
Sbjct: 27 LSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSN 86
Query: 65 TVVG--------------------------TALIEMYAKSGCVEKSLEVFNGLKEKDTAS 98
++G ++ Y KSG + ++ VF+ + E+D S
Sbjct: 87 HLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVS 146
Query: 99 WTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMS 158
W +++ G A +G ++AL ++ + G K ++ +F +L+AC + ++ R+ H
Sbjct: 147 WNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQA-HGQV 205
Query: 159 SKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNI 218
N+ ID + G + A+ D+ + ++ L+S G++
Sbjct: 206 LVAGFLSNVVLSCSIIDAYAKCGQMESAKRCF----DEMTVKDIHIWTTLISGYAKLGDM 261
Query: 219 DMGERL 224
+ E+L
Sbjct: 262 EAAEKL 267
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 188 bits (477), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 163/301 (54%), Gaps = 12/301 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y + EA+ LF MQ +GV+P ++++L+ CA +L++GR +H +++ +
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V + L+ MY K G + K+ VF+ KD W SII G A +G +AL++F
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G P+ VT I +L+ACS+AG +EEG ++F SM SK+ + P +EHY C +D+LGRA
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G + +A EL+ + + D + +GALL AC+T+ +D+ E A L
Sbjct: 482 GQVDKAMELIESMTIKPDATV---WGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYV 538
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTKFGLQ 300
I AS +W DV VR M+ + K PG S I+ VG H T+ G++
Sbjct: 539 LLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE---------VGKKVHMFTRGGIK 589
Query: 301 H 301
+
Sbjct: 590 N 590
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 12/155 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIV--VALLTGCAQSGALEHGRWIHDYVIE 58
MI GY Q NR D A LF V P+K V ++L G SG +E + E
Sbjct: 209 MITGYRQNNRVDVARKLFE------VMPEKTEVSWTSMLLGYTLSGRIEDA----EEFFE 258
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
M + A+I + + G + K+ VF+ ++++D A+W +I G +AL+L
Sbjct: 259 VMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDL 318
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
F M+K G +P + I++LS C+ ++ GR++
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCATLASLQYGRQV 353
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 105/254 (41%), Gaps = 38/254 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GY+Q EA +LF M R ++ + G G ++ R ++D +
Sbjct: 116 MVKGYMQEGMVGEAESLFWRMPER----NEVSWTVMFGGLIDDGRIDKARKLYDMMP--- 168
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D V T +I + G V+++ +F+ ++E++ +WT++I G N + + A +LFE
Sbjct: 169 -VKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC-------- 172
M + +V++ ++L + +G +E+ + F M K I N G
Sbjct: 228 VM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISK 283
Query: 173 ------------------FIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRT 214
I R G EA +L ++ Q P ++LS C T
Sbjct: 284 ARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCAT 343
Query: 215 YGNIDMGERLATTL 228
++ G ++ L
Sbjct: 344 LASLQYGRQVHAHL 357
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++GY EA LF +M R V L++G ++ + R + + + E
Sbjct: 54 IVSGYFSNGLPKEARQLFDEMSERNVVSWN----GLVSGYIKNRMIVEARNVFELMPERN 109
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V TA+++ Y + G V ++ +F + E++ SWT + GL +G+ +KA +L++
Sbjct: 110 V----VSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYD 165
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M D V ++ G V+E R +F M + N+ + I +
Sbjct: 166 MM----PVKDVVASTNMIGGLCREGRVDEARLIFDEMRER-----NVVTWTTMITGYRQN 216
Query: 181 GLLHEAEELVMKLPDQTD 198
+ A +L +P++T+
Sbjct: 217 NRVDVARKLFEVMPEKTE 234
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
I ++ G + ++ + F+ L+ K SW SI+ G NG +A +LF+ M ++ +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM----SERNV 79
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
V++ ++S ++ E R +F M + N+ + + + G++ EAE L
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
++P++ + ++G L+ G ID +L
Sbjct: 135 RMPERNEVSWTVMFGGLIDD----GRIDKARKL 163
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 106/281 (37%), Positives = 159/281 (56%), Gaps = 4/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY+ +A+ L M G + D F+ +L+ A LE G +H +
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D VVG+AL++MY+K G ++ +L FN + +++ SW S+I G A +G+ +AL+LFE
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFE 709
Query: 121 AMEKLG-AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M+ G PD VTF+ VLSACSHAGL+EEG K F SMS Y + P +EH+ C D+LGR
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGN-IDMGERLATTLXXXXXXXXXX 238
AG L + E+ + K+P + + +I L + CR G ++G++ A L
Sbjct: 770 AGELDKLEDFIEKMPMKPNVLI--WRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN 827
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
+YA+ RWED+ K R KMKD +KK GYS + ++
Sbjct: 828 YVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMK 868
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 12/211 (5%)
Query: 12 DEAIALFGDMQ-VRGVKPDKFIVVALLTG-----CAQSGALEHGRWIHDYVIENRIMVDT 65
+EA LF DM + V P+ +++ LL+ A+ L+ GR +H +VI +VD
Sbjct: 291 EEATKLFMDMNSMIDVSPESYVI--LLSSFPEYSLAEEVGLKKGREVHGHVITTG-LVDF 347
Query: 66 VVG--TALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 123
+VG L+ MYAK G + + VF + +KD+ SW S+I GL NG +A+E +++M
Sbjct: 348 MVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMR 407
Query: 124 KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLL 183
+ P T I+ LS+C+ + G+++ H S K I N+ + L G L
Sbjct: 408 RHDILPGSFTLISSLSSCASLKWAKLGQQI-HGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 184 HEAEELVMKLPDQTDEIIVPLYGALLSACRT 214
+E ++ +P+ + GAL + R+
Sbjct: 467 NECRKIFSSMPEHDQVSWNSIIGALARSERS 497
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 13/187 (6%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGA--LEHGRWIHDYVIE 58
+++GY + EA+ DM G+ +++ V++L C + G+ + GR IH + +
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 59 NRIMVDTVVGTALIEMYAKS-GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
VD VV LI MY K G V +L F ++ K++ SW SII + G A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 118 LFEAMEKLGAKPDDVTFIT-VLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+F +M+ G++P + TF + V +ACS L E +L I ++ G DL
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLE------QIMCTIQKSGLLTDL 243
Query: 177 LGRAGLL 183
+GL+
Sbjct: 244 FVGSGLV 250
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 103/201 (51%), Gaps = 2/201 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G Q F EA+ + M+ + P F +++ L+ CA + G+ IH ++
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKT-NKALELF 119
I ++ V AL+ +YA++G + + ++F+ + E D SW SII LA + ++ +A+ F
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
++ G K + +TF +VLSA S E G+++ H ++ K +I I G+
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLALKNNIADEATTENALIACYGK 564
Query: 180 AGLLHEAEELVMKLPDQTDEI 200
G + E++ ++ ++ D +
Sbjct: 565 CGEMDGCEKIFSRMAERRDNV 585
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
EA+ F + Q G K ++ ++L+ + E G+ IH ++N I + ALI
Sbjct: 500 EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALI 559
Query: 73 EMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
Y K G ++ ++F+ + E+ D +W S+I G N KAL+L M + G + D
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDS 619
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
+ TVLSA + +E G ++ H+ S + ++ ++ +D+ + G L A
Sbjct: 620 FMYATVLSAFASVATLERGMEV-HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFN 678
Query: 192 KLP 194
+P
Sbjct: 679 TMP 681
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 49 GRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAM 108
R+ H + +NR+ D + LI Y ++G + +VF+ + ++ SW I+ G +
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 109 NGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLV 147
NG+ +AL M K G + F++VL AC G V
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 160/279 (57%), Gaps = 3/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ +Q + E + LF M V +PD + LL GC + +L+ G +H Y ++
Sbjct: 444 ILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTG 503
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + + LI+MYAK G + ++ +F+ + +D SW+++I G A +G +AL LF+
Sbjct: 504 LAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFK 563
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G +P+ VTF+ VL+ACSH GLVEEG KL+ +M +++ I P EH C +DLL RA
Sbjct: 564 EMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARA 623
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L+EAE + ++ + D ++ + LLSAC+T GN+ + ++ A +
Sbjct: 624 GRLNEAERFIDEMKLEPDVVV---WKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHV 680
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
++AS+ WE+ +RS MK +KK+PG S I++E
Sbjct: 681 LLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIE 719
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
IN + N + EA+ F Q K ++L+ C+ S +L GR IHD+++ +
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
DT++ ++ MY K G + + EVF+ + E++ S+TS+I G + NG+ +A+ L+
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + PD F +++ AC+ + V G++L H+ K +L I + R
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQL-HAQVIKLESSSHLIAQNALIAMYVRF 216
Query: 181 GLLHEAEELVMKLP 194
+ +A + +P
Sbjct: 217 NQMSDASRVFYGIP 230
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 103/213 (48%), Gaps = 5/213 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGV-KPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I G+ Q EA++ +M GV P+++I + L C+ ++G IH I++
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ + + G +L +MYA+ G + + VF+ ++ DTASW II GLA NG ++A+ +F
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVF 359
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G PD ++ ++L A + + +G ++ HS K+ +L + +
Sbjct: 360 SQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQI-HSYIIKWGFLADLTVCNSLLTMYTF 418
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSAC 212
L+ L + D + + +L+AC
Sbjct: 419 CSDLYCCFNLFEDFRNNADSVS---WNTILTAC 448
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 4/198 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q + EAI L+ M + PD+F +++ CA S + G+ +H VI+
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ALI MY + + + VF G+ KD SW+SII G + G +AL +
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 121 AMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G P++ F + L ACS + G ++ H + K + N D+ R
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQI-HGLCIKSELAGNAIAGCSLCDMYAR 317
Query: 180 AGLLHEAEELV--MKLPD 195
G L+ A + ++ PD
Sbjct: 318 CGFLNSARRVFDQIERPD 335
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 7/188 (3%)
Query: 3 NGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIM 62
NGY DEA+++F M+ G PD + +LL + AL G IH Y+I+ +
Sbjct: 349 NGYA-----DEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFL 403
Query: 63 VDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELFEA 121
D V +L+ MY + +F + D+ SW +I+ + + + L LF+
Sbjct: 404 ADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKL 463
Query: 122 MEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAG 181
M +PD +T +L C ++ G ++ H S K + P ID+ + G
Sbjct: 464 MLVSECEPDHITMGNLLRGCVEISSLKLGSQV-HCYSLKTGLAPEQFIKNGLIDMYAKCG 522
Query: 182 LLHEAEEL 189
L +A +
Sbjct: 523 SLGQARRI 530
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 187 bits (476), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 155/278 (55%), Gaps = 3/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++G + F++A L ++ R + F +LL+G A G++ G IH V++
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V ALI MY+K G ++ + VFN ++ ++ SWTS+I G A +G + LE F
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G KP++VT++ +LSACSH GLV EG + F+SM + IKP +EHY C +DLL RA
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL +A E + +P Q D V ++ L ACR + N ++G+ A +
Sbjct: 625 GLLTDAFEFINTMPFQAD---VLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYI 681
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
IYA A +WE+ ++R KMK+ + K G S I++
Sbjct: 682 QLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 119/268 (44%), Gaps = 47/268 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI +Q EAI F DM + G + DKF + ++ + CA+ L G+ +H + I +
Sbjct: 240 MITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 61 IMVDTVVGTALIEMYAK---SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGK-TNKAL 116
++ D V +L++MYAK G V+ +VF+ +++ SWT++I G N +A+
Sbjct: 300 LVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 117 ELFEAMEKLG-AKPDDVTFITVLSACSH-------------------------------- 143
LF M G +P+ TF + AC +
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 417
Query: 144 ---AGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEI 200
+ +E+ ++ F S+S K NL Y F+D R +A +L+ ++ ++ +
Sbjct: 418 FVKSDRMEDAQRAFESLSEK-----NLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV 472
Query: 201 IVPLYGALLSACRTYGNIDMGERLATTL 228
+ +LLS G+I GE++ + +
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQV 500
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 103/208 (49%), Gaps = 9/208 (4%)
Query: 14 AIALFGDMQVRGVKP-DKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
A++ M G++P D +LL C ++ G+ +H +IE I D+V+ +LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 73 EMYAKSGCVEKSLEVFNGLK---EKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKP 129
+Y+KSG K+ +VF ++ ++D SW++++ NG+ A+++F +LG P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC-FIDLLGRAGLLHEAEE 188
+D + V+ ACS++ V GR + H + ++ GC ID+ + + E
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDV-CVGCSLIDMFVKG---ENSFE 220
Query: 189 LVMKLPDQTDEIIVPLYGALLSACRTYG 216
K+ D+ E+ V + +++ C G
Sbjct: 221 NAYKVFDKMSELNVVTWTLMITRCMQMG 248
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN- 59
M+ Y R +AI +F + G+ P+ + A++ C+ S + GR ++++
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG 196
Query: 60 RIMVDTVVGTALIEMYAK-SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
D VG +LI+M+ K E + +VF+ + E + +WT +I G +A+
Sbjct: 197 HFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
F M G + D T +V SAC+ + G++L
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 187 bits (475), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 102/269 (37%), Positives = 155/269 (57%), Gaps = 4/269 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
EA+ LF MQ +GV+P ++++L+ CA +L HG+ +H ++ + VD V + L+
Sbjct: 314 EALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLM 373
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGA-KPDD 131
MY K G + KS +F+ KD W SII G A +G +AL++F M G+ KP++
Sbjct: 374 TMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNE 433
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
VTF+ LSACS+AG+VEEG K++ SM S + +KP HY C +D+LGRAG +EA E++
Sbjct: 434 VTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMID 493
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADR 251
+ + D + +G+LL ACRT+ +D+ E A L +YAS R
Sbjct: 494 SMTVEPDAAV---WGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGR 550
Query: 252 WEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
W DV ++R MK ++K PG S ++E
Sbjct: 551 WADVAELRKLMKTRLVRKSPGCSWTEVEN 579
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDK--FIVVALLTGCAQSGALEHGRWIHDYVIE 58
M+ G++Q R D+A L+ + PDK +++ G + G ++ R I D + E
Sbjct: 147 MLIGFLQDGRIDDACKLYE------MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ + T ++ Y ++ V+ + ++F+ + EK SWTS++ G NG+ A EL
Sbjct: 201 RSV----ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL 256
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
FE M KP + ++S G + + R++F SM + N + I +
Sbjct: 257 FEVMP---VKP-VIACNAMISGLGQKGEIAKARRVFDSMKER-----NDASWQTVIKIHE 307
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
R G EA +L + + Q P ++LS C + ++ G+++ L
Sbjct: 308 RNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQL 357
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 97/200 (48%), Gaps = 21/200 (10%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVV--ALLTGCAQSGALEHGRWIHDYVIE 58
M+ GY +A LF +M PD+ I+ L++G ++G ++ R + D + E
Sbjct: 54 MVAGYFANLMPRDARKLFDEM------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPE 107
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ V TAL++ Y +G V+ + +F + EK+ SWT ++ G +G+ + A +L
Sbjct: 108 RNV----VSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKL 163
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+E + D++ +++ G V+E R++F MS + I + + G
Sbjct: 164 YEMI----PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVIT-----WTTMVTGYG 214
Query: 179 RAGLLHEAEELVMKLPDQTD 198
+ + +A ++ +P++T+
Sbjct: 215 QNNRVDDARKIFDVMPEKTE 234
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 187 bits (475), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/284 (33%), Positives = 160/284 (56%), Gaps = 4/284 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I GY + +EA++LF + + + PD+ V +L CA A + GR IH Y++ N
Sbjct: 469 IIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRN 528
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D V +L++MYAK G + + +F+ + KD SWT +I G M+G +A+ LF
Sbjct: 529 GYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALF 588
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M + G + D+++F+++L ACSH+GLV+EG + F+ M + I+P +EHY C +D+L R
Sbjct: 589 NQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLAR 648
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G L +A + +P D I +GALL CR + ++ + E++A +
Sbjct: 649 TGDLIKAYRFIENMPIPPDATI---WGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYY 705
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGN 283
IYA A++WE V ++R ++ G++K PG S I+++G N
Sbjct: 706 VLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVN 749
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 91/154 (59%), Gaps = 1/154 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY + EA+ LF +M+ G+ PD + V A+L CA+ L+ G+ +H+++ EN
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D V AL++MYAK G ++++ VF+ ++ KD SW +II G + N N+AL LF
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 121 -AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+E+ PD+ T VL AC+ ++GR++
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 100/187 (53%), Gaps = 1/187 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+INGYV ++ +++F M V G++ D +V++ GCA S + GR +H ++
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ L++MY+K G ++ + VF + ++ S+TS+I G A G +A++LFE
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
ME+ G PD T VL+ C+ L++EG+++ H + + ++ +D+ +
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV-HEWIKENDLGFDIFVSNALMDMYAKC 445
Query: 181 GLLHEAE 187
G + EAE
Sbjct: 446 GSMQEAE 452
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 1/197 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++N + F +I LF M GV+ D + + + ++ G +H +++++
Sbjct: 166 LMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSG 225
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
VG +L+ Y K+ V+ + +VF+ + E+D SW SII G NG K L +F
Sbjct: 226 FGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFV 285
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G + D T ++V + C+ + L+ GR + HS+ K +D+ +
Sbjct: 286 QMLVSGIEIDLATIVSVFAGCADSRLISLGRAV-HSIGVKACFSREDRFCNTLLDMYSKC 344
Query: 181 GLLHEAEELVMKLPDQT 197
G L A+ + ++ D++
Sbjct: 345 GDLDSAKAVFREMSDRS 361
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 65/125 (52%)
Query: 29 DKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVF 88
D + ++L CA S +L+ G+ + +++ N ++D+ +G+ L MY G ++++ VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 89 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVE 148
+ +K + W ++ LA +G + ++ LF+ M G + D TF V + S V
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVH 212
Query: 149 EGRKL 153
G +L
Sbjct: 213 GGEQL 217
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 187 bits (475), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/283 (36%), Positives = 156/283 (55%), Gaps = 7/283 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G VQ +A+ LF M+ V+P+ + +LL A L IH Y+ +
Sbjct: 391 IIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTG 450
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
M T L+ +Y+K G +E + ++FNG++EK D W ++I G M+G + AL
Sbjct: 451 FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNAL 510
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++F M + G P+++TF + L+ACSH+GLVEEG LF M Y HY C +DL
Sbjct: 511 QVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDL 570
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXX 236
LGRAG L EA L+ +P + + +GALL+AC T+ N+ +GE A L
Sbjct: 571 LGRAGRLDEAYNLITTIPFEPTSTV---WGALLAACVTHENVQLGEMAANKLFELEPENT 627
Query: 237 XXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
IYA+ RW+D+ KVRS M+++G++K PG+S+I++
Sbjct: 628 GNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 109/218 (50%), Gaps = 3/218 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MINGY + + A+ L MQ GV+P+ + +L++ C + + G+ +H + + +
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D ++ T+LI MYAK V+ VF+G + T W++II G N + AL LF+
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL-FHSMSSKYHIKPNLEHYGCFIDLLGR 179
M + +P+ T ++L A +A L + + + H +K +L+ + + +
Sbjct: 410 RMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSK 467
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGN 217
G L A ++ + ++ V L+GAL+S +G+
Sbjct: 468 CGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 81/153 (52%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + ++A+ +F M V D +V++L C LE GR +H V E R
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR 248
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V AL+ MY K G ++++ VF+ ++ +D +WT +I G +G ALEL
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR 308
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M+ G +P+ VT +++S C A V +G+ L
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL 341
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVK--PDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
+I YV+ + +AI++F M GVK PD + + + +++ G +H ++
Sbjct: 86 VIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILR 145
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ D V AL+ MY G VE + +VF+ +K +D SW ++I G NG N AL +
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F+ M D T +++L C H +E GR + H + + + +E +++
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNV-HKLVEEKRLGDKIEVKNALVNMYL 264
Query: 179 RAGLLHEAE 187
+ G + EA
Sbjct: 265 KCGRMDEAR 273
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 187 bits (475), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 155/279 (55%), Gaps = 5/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ Q EA+ LF M V P+ V +L + CA G+L G +H Y ++
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473
Query: 61 IMVDTVV--GTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ + V GTAL++ YAK G + + +F+ ++EK+T +W+++I G G T +LEL
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLEL 533
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
FE M K KP++ TF ++LSAC H G+V EG+K F SM Y+ P+ +HY C +D+L
Sbjct: 534 FEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLA 593
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG L +A +++ K+P Q D V +GA L C + D+GE + +
Sbjct: 594 RAGELEQALDIIEKMPIQPD---VRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASY 650
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
+YAS RW +VR+ MK G+ K+ G+S+++
Sbjct: 651 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 116/253 (45%), Gaps = 29/253 (11%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GYV+ + +E + LF M+ V +++ L+ C + AL G+W H ++++
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I + + + T+L++MY K G + + VFN D WT++I G NG N+AL LF+
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGR-------------------------KLFH 155
M+ + KP+ VT +VLS C +E GR K +
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQ 392
Query: 156 SMSSKYHIKPNLEH----YGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSA 211
+ +KY + E + I + G +HEA L ++ ++ +L SA
Sbjct: 393 NRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSA 452
Query: 212 CRTYGNIDMGERL 224
C + G++ +G L
Sbjct: 453 CASLGSLAVGSSL 465
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 83/160 (51%), Gaps = 2/160 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY +EA++LF M+ +KP+ + ++L+GC LE GR +H I+
Sbjct: 314 MIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG 373
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I DT V AL+ MYAK + VF EKD +W SII G + NG ++AL LF
Sbjct: 374 IW-DTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFH 432
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
M P+ VT ++ SAC+ G + G L H+ S K
Sbjct: 433 RMNSESVTPNGVTVASLFSACASLGSLAVGSSL-HAYSVK 471
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ Y E + L+ + G + D + L C + L++G+ IH +++
Sbjct: 113 MLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVP 172
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D VV T L++MYAK G ++ + +VFN + ++ WTS+I G N + L LF
Sbjct: 173 SF-DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFN 231
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
M + ++ T+ T++ AC+ + +G K FH +K +E C + L
Sbjct: 232 RMRENNVLGNEYTYGTLIMACTKLSALHQG-KWFHGCL----VKSGIELSSCLVTSL 283
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 36 LLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD 95
LL+ C +L R H + N +M D + T L+ +Y G + + VF+ + E D
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 96 TASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
W ++ +N ++ + ++L++ + K G + DD+ F L AC+ ++ G+K+
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 187 bits (474), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 156/274 (56%), Gaps = 7/274 (2%)
Query: 11 FDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
F EA++LF M ++P++ VV +L+ CAQ+G L+ + IH + + D V
Sbjct: 240 FLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSN 299
Query: 70 ALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGA-- 127
+L+++Y K G +E++ VF +K +W S+I A++G++ +A+ +FE M KL
Sbjct: 300 SLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIND 359
Query: 128 -KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEA 186
KPD +TFI +L+AC+H GLV +GR F M++++ I+P +EHYGC IDLLGRAG EA
Sbjct: 360 IKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEA 419
Query: 187 EELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIY 246
E++ + + DE I +G+LL+AC+ +G++D+ E L +Y
Sbjct: 420 LEVMSTMKMKADEAI---WGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLY 476
Query: 247 ASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
WE+ + R +K K PG+S I+++
Sbjct: 477 GEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDN 510
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Query: 12 DEAIALFGDMQVRGV-KPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
A + F M R V +P+ FI +L + +H ++ ++ + VV TA
Sbjct: 107 SSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTA 166
Query: 71 LIEMYAKS-GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKP 129
L+ YA S + + ++F+ + E++ SWT+++ G A +G + A+ LFE M +
Sbjct: 167 LLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM----PER 222
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAE 187
D ++ +L+AC+ GL E LF M ++ I+PN C + + G L A+
Sbjct: 223 DVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAK 280
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM- 122
+ V TA++ YA+SG + ++ +F + E+D SW +I+ NG +A+ LF M
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 123 EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGL 182
+ +P++VT + VLSAC+ G ++ + + H+ + + + ++ +DL G+ G
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGI-HAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 183 LHEAEEL 189
L EA +
Sbjct: 311 LEEASSV 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDM---QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVI 57
MIN + R +EAIA+F +M + +KPD + LL C G + GR D ++
Sbjct: 332 MINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFD-LM 390
Query: 58 ENRIMVDTVVGT--ALIEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNK 114
NR ++ + LI++ ++G +++LEV + +K K D A W S++ ++G +
Sbjct: 391 TNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDL 450
Query: 115 A 115
A
Sbjct: 451 A 451
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 148/278 (53%), Gaps = 3/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ V+F F + + M+ V PD + L CA A G+ IH ++
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFG 539
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +G ALIEMY+K GC+E S VF + +D +WT +I M G+ KALE F
Sbjct: 540 YESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
MEK G PD V FI ++ ACSH+GLV+EG F M + Y I P +EHY C +DLL R+
Sbjct: 600 DMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRS 659
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
+ +AEE + +P + D I + ++L ACRT G+++ ER++ +
Sbjct: 660 QKISKAEEFIQAMPIKPDASI---WASVLRACRTSGDMETAERVSRRIIELNPDDPGYSI 716
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
YA+ +W+ V+ +R +KD I K PGYS I++
Sbjct: 717 LASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEV 754
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 122/228 (53%), Gaps = 6/228 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY++ +E++ +F + + KPD V ++L C L ++I++Y+++
Sbjct: 279 MICGYLKLEMVEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++++ V LI++YAK G + + +VFN ++ KDT SW SII G +G +A++LF+
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + + D +T++ ++S + ++ G+ L HS K I +L ID+ +
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGL-HSNGIKSGICIDLSVSNALIDMYAKC 456
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
G + ++ ++ + T + + + ++SAC +G+ G ++ T +
Sbjct: 457 GEVGDSLKIFSSM--GTGDTVT--WNTVISACVRFGDFATGLQVTTQM 500
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 84/153 (54%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I + + F EA+ +G ++ V PDK+ +++ CA E G +++ +++
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMG 136
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D VG AL++MY++ G + ++ +VF+ + +D SW S+I G + +G +ALE++
Sbjct: 137 FESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYH 196
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
++ PD T +VL A + +V++G+ L
Sbjct: 197 ELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY+Q EA+ LF M + + D + L++ + L+ G+ +H I++
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I +D V ALI+MYAK G V SL++F+ + DT +W ++I G L++
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M K PD TF+ L C+ G+++ H ++ + L+ I++ +
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCASLAAKRLGKEI-HCCLLRFGYESELQIGNALIEMYSKC 557
Query: 181 GLLHEAEELVMKL 193
G L + + ++
Sbjct: 558 GCLENSSRVFERM 570
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 81/158 (51%), Gaps = 3/158 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY ++EA+ ++ +++ + PD F V ++L ++ G+ +H + +++
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG 237
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VV L+ MY K + VF+ + +D+ S+ ++ICG +++ +F
Sbjct: 238 VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF- 296
Query: 121 AMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSM 157
+E L KPD +T +VL AC H + + +++ M
Sbjct: 297 -LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYM 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 75/176 (42%), Gaps = 10/176 (5%)
Query: 21 MQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGC 80
MQ R P FI AL + S L R IH VI + LI+ Y+
Sbjct: 1 MQTRVSSP--FISRAL----SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFRE 54
Query: 81 VEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLS 139
SL VF + K+ W SII + NG +ALE + + + PD TF +V+
Sbjct: 55 PASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIK 114
Query: 140 ACSHAGLVE-EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLP 194
AC AGL + E L + + +L +D+ R GLL A ++ ++P
Sbjct: 115 AC--AGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP 168
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 153/281 (54%), Gaps = 7/281 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y Q + EA LF +M+ GV PD + +L+ C GALE G+ I + E
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS 364
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V T L++MY K G VE++L VF + K+ A+W ++I A G +AL LF+
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 424
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
++ P D+TFI VLSAC HAGLV +G + FH MSS + + P +EHY IDLL RA
Sbjct: 425 ---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 481
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXX-XX 239
G+L EA E + + P + DEI++ A+L AC ++ + E+ L
Sbjct: 482 GMLDEAWEFMERFPGKPDEIML---AAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNY 538
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+ A W++ K+R+ M+D G+ K PG S I++EG
Sbjct: 539 VISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEG 579
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 114/198 (57%), Gaps = 1/198 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + +A+ LF M+ G +PD+ +V++L C+ G L GR + + I +
Sbjct: 204 MISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK 263
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I + T +G+ LI MY K G ++ + VFN + +KD +WT++I + NGK+++A +LF
Sbjct: 264 IGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFF 323
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
MEK G PD T TVLSAC G +E G+++ + +S+ ++ N+ +D+ G+
Sbjct: 324 EMEKTGVSPDAGTLSTVLSACGSVGALELGKQI-ETHASELSLQHNIYVATGLVDMYGKC 382
Query: 181 GLLHEAEELVMKLPDQTD 198
G + EA + +P + +
Sbjct: 383 GRVEEALRVFEAMPVKNE 400
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 88/154 (57%), Gaps = 1/154 (0%)
Query: 1 MINGYVQ-FNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI G +N + A++L+ M+ G+KPDKF + CA+ + GR +H + +
Sbjct: 102 MIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKV 161
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ D + +LI MYAK G V + ++F+ + E+DT SW S+I G + G A++LF
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLF 221
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
ME+ G +PD+ T +++L ACSH G + GR L
Sbjct: 222 RKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 157/281 (55%), Gaps = 7/281 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+G+ +I F M + +PD ++V +L C++ G LE + H YVI+
Sbjct: 336 LISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKY 395
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ +G +L+E+Y++ G + + +VFNG+ KDT WTS+I G ++GK KALE F
Sbjct: 396 GFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETF 455
Query: 120 EAMEKLG-AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
M K KP++VTF+++LSACSHAGL+ EG ++F M + Y + PNLEHY +DLLG
Sbjct: 456 NHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLG 515
Query: 179 RAGLLHEAEELVMKLP-DQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXX 237
R G L A E+ ++P T +I+ G LL ACR + N +M E +A L
Sbjct: 516 RVGDLDTAIEITKRMPFSPTPQIL----GTLLGACRIHQNGEMAETVAKKLFELESNHAG 571
Query: 238 XXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
+Y WE+V K+R+ +K GIKK S I++
Sbjct: 572 YYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEI 612
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 97/190 (51%), Gaps = 2/190 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I YVQ EA+ +F DM G +P+ V+ +L CA + LE GR H+ I
Sbjct: 235 VIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG 294
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V TAL++MY K E++ VF+ + KD SW ++I G +NG ++++E F
Sbjct: 295 LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFS 354
Query: 121 AM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M + +PD + + VL +CS G +E+ K FHS KY N ++L R
Sbjct: 355 IMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSR 413
Query: 180 AGLLHEAEEL 189
G L A ++
Sbjct: 414 CGSLGNASKV 423
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 99/197 (50%), Gaps = 2/197 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
M++G+ + +A+ F M V PD+ ++ L++ C + GR +H +VI
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D + +L+ YAKS ++++ +F + EKD SW+++I NG +AL +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G +P+ T + VL AC+ A +E+GRK H ++ + ++ ++ +D+ +
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVSTALVDMYMK 311
Query: 180 AGLLHEAEELVMKLPDQ 196
EA + ++P +
Sbjct: 312 CFSPEEAYAVFSRIPRK 328
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIM-VDTVVG 68
+++E + F M KPD F + L C + + +G IH +V ++ + D VG
Sbjct: 40 QWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVG 99
Query: 69 TALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLG-A 127
++LI MY K G + ++L +F+ L++ D +W+S++ G NG +A+E F M
Sbjct: 100 SSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDV 159
Query: 128 KPDDVTFITVLSACSHAGLVEEGR 151
PD VT IT++SAC+ GR
Sbjct: 160 TPDRVTLITLVSACTKLSNSRLGR 183
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 149/261 (57%), Gaps = 12/261 (4%)
Query: 25 GVKPDKFIVVALLTGCAQSGALEHGRWIHDYV--IENRIMVDTVVGTALIEMYAKSGCVE 82
GV+P +V +L+ +Q+G LE G +H Y+ + VD +GTAL++MY+K GC+
Sbjct: 215 GVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLN 274
Query: 83 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACS 142
+ VF +K K+ +WTS+ GLA+NG+ N+ L M + G KP+++TF ++LSA
Sbjct: 275 NAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYR 334
Query: 143 HAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIV 202
H GLVEEG +LF SM +++ + P +EHYGC +DLLG+AG + EA + ++ +P + D I
Sbjct: 335 HIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAI-- 392
Query: 203 PLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX-------XXXXXIYASADRWEDV 255
L +L +AC YG MGE + L + A +W +V
Sbjct: 393 -LLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEV 451
Query: 256 NKVRSKMKDLGIKKVPGYSSI 276
K+R +MK+ IK PGYS +
Sbjct: 452 EKLRKEMKERRIKTRPGYSFV 472
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 46 LEHGRWIHDYVIENRIMVDT-VVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIIC 104
L GR +H V + + ++ ++GT L+ YAK+G + + +VF+ + E+ + +W ++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 105 GLAM-----NGKTNKALELFEAMEKLGA--KPDDVTFITVLSACSHAGLVEEGRKLFHSM 157
G N KA+ LF G+ +P D T + VLSA S GL+E G L H
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG-SLVHGY 245
Query: 158 SSKYHIKPNLEHY--GCFIDLLGRAGLLHEA 186
K P ++ + +D+ + G L+ A
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/286 (35%), Positives = 164/286 (57%), Gaps = 14/286 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN- 59
MI+ Y + EAI LF M+ ++ D IV L+ CA GA++ G I+ I+
Sbjct: 138 MISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRK 197
Query: 60 -RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
R+ +D + +L+ MY KSG EK+ ++F+ KD ++TS+I G A+NG+ ++LEL
Sbjct: 198 RRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLEL 257
Query: 119 FEAMEKLGAK------PDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC 172
F+ M+ + P+DVTFI VL ACSH+GLVEEG++ F SM Y++KP H+GC
Sbjct: 258 FKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGC 317
Query: 173 FIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXX 232
+DL R+G L +A E + ++P + + +I + LL AC +GN+++GE + +
Sbjct: 318 MVDLFCRSGHLKDAHEFINQMPIKPNTVI---WRTLLGACSLHGNVELGEEVQRRIFELD 374
Query: 233 XXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
IYAS W++ +K+R +++ +++PG S I+L
Sbjct: 375 RDHVGDYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIEL 417
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 29 DKF-IVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEV 87
D F ++ A+ AQ + GR IH V + + T+L+ Y+ G V+ + +V
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 88 FNGLKEK-DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGL 146
F+ EK + WT++I N + +A+ELF+ ME + D V LSAC+ G
Sbjct: 123 FDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGA 182
Query: 147 VEEGRKLF-HSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
V+ G +++ S+ K + +L +++ ++G +A +L
Sbjct: 183 VQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKL 226
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 160/280 (57%), Gaps = 4/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G+ + + ++A+ LF M G +P F +L C+ +G LE G+W+H Y+I++
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ G L++MYAKSG + + ++F+ L ++D SW S++ A +G +A+ FE
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M ++G +P++++F++VL+ACSH+GL++EG ++ + K I P HY +DLLGRA
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVPEAWHYVTVVDLLGRA 411
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L+ A + ++P E ++ ALL+ACR + N ++G A +
Sbjct: 412 GDLNRALRFIEEMP---IEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
IYAS RW D +VR KMK+ G+KK P S +++E
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIEN 508
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY Q +R +A+ F M G P++F + +++ A G +H + ++
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VG+AL+++Y + G ++ + VF+ L+ ++ SW ++I G A T KALELF+
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G +P ++ ++ ACS G +E+G K H+ K K +D+ ++
Sbjct: 252 GMLRDGFRPSHFSYASLFGACSSTGFLEQG-KWVHAYMIKSGEKLVAFAGNTLLDMYAKS 310
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
G +H+A ++ +L + V + +LL+A +G
Sbjct: 311 GSIHDARKIFDRLAKRD----VVSWNSLLTAYAQHG 342
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 1/180 (0%)
Query: 19 GDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKS 78
D++ + D+ LL C L GR +H +++++ D V+G L+ MYAK
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 79 GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVL 138
G +E++ +VF + ++D +WT++I G + + + AL F M + G P++ T +V+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 139 SACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTD 198
A + G +L H K N+ +DL R GL+ +A+ + L + D
Sbjct: 169 KAAAAERRGCCGHQL-HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 184 bits (466), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 156/279 (55%), Gaps = 4/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GYVQ + LF M+ ++ D+ +L A +L G+ +H ++I +
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + G+ L++MYAK G ++ +++VF + +++ SW ++I A NG A+ F
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G +PD V+ + VL+ACSH G VE+G + F +MS Y I P +HY C +DLLGR
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN 602
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL-XXXXXXXXXXX 239
G EAE+L+ ++P + DEI ++ ++L+ACR + N + ER A L
Sbjct: 603 GRFAEAEKLMDEMPFEPDEI---MWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAY 659
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
IYA+A WE V V+ M++ GIKKVP YS +++
Sbjct: 660 VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 9/213 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ Y Q ++++ ++ F +MQ G F +L+ A +L+ GR +H +
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL--L 379
Query: 61 IMVDTV--VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
D++ VG +L++MYAK E++ +F L ++ T SWT++I G G L+L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M + D TF TVL A + + G++L H+ + N+ +D+
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQL-HAFIIRSGNLENVFSGSGLVDMYA 498
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSA 211
+ G + +A ++ ++PD+ + AL+SA
Sbjct: 499 KCGSIKDAVQVFEEMPDRN----AVSWNALISA 527
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDM--QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
++ Y + + FDEA LF M PD LL GC + +H + +
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAV- 174
Query: 59 NRIMVDT----VVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNK 114
++ DT V L++ Y + ++ + +F + EKD+ ++ ++I G +G +
Sbjct: 175 -KLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTE 233
Query: 115 ALELFEAMEKLGAKPDDVTFITVLSA 140
++ LF M + G +P D TF VL A
Sbjct: 234 SIHLFLKMRQSGHQPSDFTFSGVLKA 259
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 184 bits (466), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 163/282 (57%), Gaps = 11/282 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWI-HDYVIEN 59
+I G V NR EA+ L+ M+ G++ + VVA L C+ G ++ G I H Y +N
Sbjct: 181 LIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDN 240
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALEL 118
+V A I+MY+K G V+K+ +VF +K +W ++I G A++G+ ++ALE+
Sbjct: 241 -----VIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEI 295
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F+ +E G KPDDV+++ L+AC HAGLVE G +F++M+ K ++ N++HYGC +DLL
Sbjct: 296 FDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLS 354
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG L EA +++ + D + L+ +LL A Y +++M E + +
Sbjct: 355 RAGRLREAHDIICSMSMIPDPV---LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGD 411
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+YA+ RW+DV +VR M+ +KK+PG S I+ +G
Sbjct: 412 FVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKG 453
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 27 KPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLE 86
+ D L CA++ +H + + D+++ T L++ Y+K+G + + +
Sbjct: 106 RVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYK 165
Query: 87 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGL 146
+F+ + +D ASW ++I GL + ++A+EL++ ME G + +VT + L ACSH G
Sbjct: 166 LFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGD 225
Query: 147 VEEGRKLFHSMSSKYHIKPNL------------EHYGCFIDLLGRAGLL----------- 183
V+EG +FH S+ I N + Y F G+ ++
Sbjct: 226 VKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAV 285
Query: 184 ----HEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMG 221
H A E+ KL D + Y A L+ACR G ++ G
Sbjct: 286 HGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYG 327
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 159/296 (53%), Gaps = 3/296 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY Q + + L+ M+ GV PD F +V++L+ CA GA + G + V N
Sbjct: 228 VISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG 287
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V A I MYA+ G + K+ VF+ + K SWT++I M+G L LF+
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFD 347
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M K G +PD F+ VLSACSH+GL ++G +LF +M +Y ++P EHY C +DLLGRA
Sbjct: 348 DMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRA 407
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA E + +P + D + +GALL AC+ + N+DM E +
Sbjct: 408 GRLDEAMEFIESMPVEPDGAV---WGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYV 464
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
IY+ + E + ++R M++ +K PGYS ++ +G + G SH T+
Sbjct: 465 LMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTE 520
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 1/197 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY ++ +A +F M+ GV D ++ L+ C L GR +H ++
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V + I MY K G VE +F+ + K +W ++I G + NG LEL+E
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G PD T ++VLS+C+H G + G ++ + S + PN+ I + R
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSNASISMYARC 305
Query: 181 GLLHEAEELVMKLPDQT 197
G L +A + +P ++
Sbjct: 306 GNLAKARAVFDIMPVKS 322
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
F E+I+L+ M G PD F +L CA G+ +H +V + + V TA
Sbjct: 34 FSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTA 93
Query: 71 LIEMYAKSGCVEKSLEVF--NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAK 128
LI MY K G V + +VF N + + + ++I G N K A +F M++ G
Sbjct: 94 LISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVS 153
Query: 129 PDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEE 188
D VT + ++ C+ + GR L H K + + FI + + G +
Sbjct: 154 VDSVTMLGLVPLCTVPEYLWLGRSL-HGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRR 212
Query: 189 LVMKLP 194
L ++P
Sbjct: 213 LFDEMP 218
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 153/289 (52%), Gaps = 9/289 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G VQ F EA +L DM G+KP LL+ + L+ G+ IH + +
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTT 496
Query: 61 IMVDT--VVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
D ++ +L+ MYAK G +E + E+F + +KDT SW S+I GL+ +G +KAL L
Sbjct: 497 ACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNL 556
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F+ M G KP+ VTF+ VLSACSH+GL+ G +LF +M Y I+P ++HY IDLLG
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLG 616
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSAC----RTYGNIDMGERLATTLXXXXXX 234
RAG L EAEE + LP D + YGALL C R + ER A L
Sbjct: 617 RAGKLKEAEEFISALPFTPDHTV---YGALLGLCGLNWRDKDAEGIAERAAMRLLELDPV 673
Query: 235 XXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGN 283
+YA R + ++R +M G+KK PG S + + G N
Sbjct: 674 NAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRAN 722
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 92/199 (46%), Gaps = 22/199 (11%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVV--ALLTGCAQSGALEHGRWIHDYVIE 58
+++ Y + DEA LF V P++ IV A+LTG + + W +
Sbjct: 83 LLSKYAKTGYLDEARVLFE------VMPERNIVTCNAMLTGYVKCRRMNEA-WTLFREMP 135
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
++ TV+ TAL + G E ++E+F+ + E++ SW +++ GL NG KA ++
Sbjct: 136 KNVVSWTVMLTALCD----DGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQV 191
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F+AM D V++ ++ +EE + LF MS K + YG
Sbjct: 192 FDAM----PSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYG-----YC 242
Query: 179 RAGLLHEAEELVMKLPDQT 197
R G + EA L ++P++
Sbjct: 243 RYGDVREAYRLFCEMPERN 261
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Query: 42 QSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTS 101
++G LE + + V + + D V T++I+ Y ++G V ++ +F L +KD +WT
Sbjct: 380 KNGDLERAETLFERV---KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTV 436
Query: 102 IICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKY 161
+I GL N +A L M + G KP + T+ +LS+ +++G+ + H + +K
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHI-HCVIAKT 495
Query: 162 H--IKPNLEHYGCFIDLLGRAGLLHEAEELVMKL 193
P+L + + + G + +A E+ K+
Sbjct: 496 TACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKM 529
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 111/267 (41%), Gaps = 64/267 (23%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVK------------------------PDKFIVV-- 34
M+ GYV+ R +EA LF +M V P++ +V
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN 173
Query: 35 ALLTGCAQSGALEHGRWIHDYV---------------IENRIM------------VDTVV 67
L+TG ++G +E + + D + IEN M + V
Sbjct: 174 TLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVT 233
Query: 68 GTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEK--L 125
T+++ Y + G V ++ +F + E++ SWT++I G A N +AL LF M+K
Sbjct: 234 WTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVD 293
Query: 126 GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIK--PNLEHYG----CFIDLLGR 179
P+ T I++ AC GL E R+L + ++ ++H G + +
Sbjct: 294 AVSPNGETLISLAYAC--GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYAS 351
Query: 180 AGLLHEAEELVMKLPD-QTDEIIVPLY 205
+GL+ A+ L+ + D Q+ II+ Y
Sbjct: 352 SGLIASAQSLLNESFDLQSCNIIINRY 378
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 83/173 (47%), Gaps = 14/173 (8%)
Query: 24 RGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEK 83
RG ++ +++ L+ G L H R + D + + + V T+L+ YAK+G +++
Sbjct: 40 RGFSNEEALILRRLS----EGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDE 95
Query: 84 SLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSH 143
+ +F + E++ + +++ G + N+A LF M K + V++ +L+A
Sbjct: 96 ARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCD 150
Query: 144 AGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
G E+ +LF M + N+ + + L R G + +A+++ +P +
Sbjct: 151 DGRSEDAVELFDEMPER-----NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR 198
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 154/277 (55%), Gaps = 4/277 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+G VQ R A +F M + G + PD + +LL GC+Q L G+ +H Y + N
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRN 478
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ V TALI+MYAK G ++ VF +K TA+W S+I G +++G ++AL +
Sbjct: 479 NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCY 538
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M + G KPD++TF+ VLSAC+H G V+EG+ F +M ++ I P L+HY + LLGR
Sbjct: 539 LEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGR 598
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
A L EA L+ K+ + D + +GALLSAC + +++GE +A +
Sbjct: 599 ACLFTEALYLIWKMDIKPDSAV---WGALLSACIIHRELEVGEYVARKMFMLDYKNGGLY 655
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
+YA+ W+DV +VR+ MKD G G S I
Sbjct: 656 VLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ Y + D A+ F + +K D +V +L GC +S ++ G +H Y I++
Sbjct: 318 IVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSG 377
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ T+V LI MY+K VE L +F L+E SW S+I G +G+ + A E+F
Sbjct: 378 LCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFH 437
Query: 121 AMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNL--EHYGC--FID 175
M G PD +T ++L+ CS + G++L Y ++ N E++ C ID
Sbjct: 438 QMMLTGGLLPDAITIASLLAGCSQLCCLNLGKEL-----HGYTLRNNFENENFVCTALID 492
Query: 176 LLGRAGLLHEAEEL 189
+ + G +AE +
Sbjct: 493 MYAKCGNEVQAESV 506
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 90/186 (48%), Gaps = 5/186 (2%)
Query: 15 IALFGDMQVRGVKPDKFIVVALL---TGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
I +F D+ + P+ F + L T S L+ + + ++ ++ + V T+L
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ-VQTHLTKSGLDRFVYVKTSL 91
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
+ +Y K GCV + +F+ + E+DT W ++ICG + NG A +LF M + G P
Sbjct: 92 LNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSA 151
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
T + +L C G V +GR + H +++K ++ + + I + L AE L
Sbjct: 152 TTLVNLLPFCGQCGFVSQGRSV-HGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFR 210
Query: 192 KLPDQT 197
++ D++
Sbjct: 211 EMKDKS 216
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 9/190 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY + +A LF M +G P +V LL C Q G + GR +H ++
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +D+ V ALI Y+K + + +F +K+K T SW ++I + +G +A+ +F+
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 241
Query: 121 AMEKLGAKPDDVTFITVLSA-CSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M + + VT I +LSA SH L H + K + ++ + R
Sbjct: 242 NMFEKNVEISPVTIINLLSAHVSHEPL--------HCLVVKCGMVNDISVVTSLVCAYSR 293
Query: 180 AGLLHEAEEL 189
G L AE L
Sbjct: 294 CGCLVSAERL 303
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 11/216 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y Q +EAI +F +M + V+ ++ LL S + H +H V++
Sbjct: 223 MIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLL-----SAHVSH-EPLHCLVVKCG 276
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ D V T+L+ Y++ GC+ + ++ K+ TSI+ A G + A+ F
Sbjct: 277 MVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFS 336
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+L K D V + +L C + ++ G L Y IK L ++ L
Sbjct: 337 KTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL-----HGYAIKSGLCTKTLVVNGLITM 391
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
+ E V+ L +Q E + + +++S C G
Sbjct: 392 YSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSG 427
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 98/269 (36%), Positives = 149/269 (55%), Gaps = 3/269 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G V+ A LF ++ G+ D+FIV +L C+ +L G+ IH I+
Sbjct: 414 LIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKG 473
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V TAL++MY K G ++ + +F+G+ E+D SWT II G NG+ +A F
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +G +P+ VTF+ +LSAC H+GL+EE R +M S+Y ++P LEHY C +DLLG+A
Sbjct: 534 KMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQA 593
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GL EA EL+ K+P + D+ I + +LL+AC T+ N + +A L
Sbjct: 594 GLFQEANELINKMPLEPDKTI---WTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYT 650
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKK 269
YA+ W+ ++KVR K LG K+
Sbjct: 651 SLSNAYATLGMWDQLSKVREAAKKLGAKE 679
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 31/198 (15%)
Query: 29 DKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVF 88
D ++ A L C + A + G I +VI+ I + + +I MY + + +VF
Sbjct: 4 DLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVF 63
Query: 89 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAM-EKLGAKPDDVTFITVLSACSHAG-- 145
+ + E++ +WT+++ G +GK NKA+EL+ M + ++ + VL AC G
Sbjct: 64 DEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDI 123
Query: 146 ----------------------------LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
V+ GR + + S K ++P+ + I
Sbjct: 124 QLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGY 183
Query: 178 GRAGLLHEAEELVMKLPD 195
+AGL+ EA L ++P
Sbjct: 184 CKAGLMDEAVTLFHRMPQ 201
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 73/153 (47%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++G++ + A+ L + + D + + L C L G +H V+ +
Sbjct: 313 MLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSG 372
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+D +VG+ L++++A G ++ + ++F+ L KD +++ +I G +G + A LF
Sbjct: 373 YELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFR 432
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+ KLG D +L CS + G+++
Sbjct: 433 ELIKLGLDADQFIVSNILKVCSSLASLGWGKQI 465
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
M++GY + ++AI L+ M ++F+ A+L C G ++ G +++ + +
Sbjct: 77 MVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKE 136
Query: 60 RIMVDTVVGTALIEM-------------------------------YAKSGCVEKSLEVF 88
+ D V+ ++++M Y K+G +++++ +F
Sbjct: 137 NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLF 196
Query: 89 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVE 148
+ + + + SW +I G G + +ALE M++ G D L ACS GL+
Sbjct: 197 HRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLT 255
Query: 149 EGRKLFHSM------SSKYHIKPNLEHYGCFIDLLGRAGLLHE 185
G++L + SS + I ++ Y L+ A + H+
Sbjct: 256 MGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQ 298
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 9/219 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+V A+ MQ G+ D F + L C+ G L G+ +H V+++
Sbjct: 210 LISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSG 268
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK---EKDTASWTSIICGLAMNGKTNKALE 117
+ +ALI+MY+ G + + +VF+ K A W S++ G +N + AL
Sbjct: 269 LESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALW 328
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
L + + D T L C + + G ++ HS+ + + +DL
Sbjct: 329 LLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV-HSLVVVSGYELDYIVGSILVDLH 387
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
G + +A +L +LP++ +II + L+ C G
Sbjct: 388 ANVGNIQDAHKLFHRLPNK--DIIA--FSGLIRGCVKSG 422
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 154/263 (58%), Gaps = 4/263 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
++ ++ MQ G P+ +++ C+ + E G+ +H ++++ + +G++L+
Sbjct: 256 RSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLL 315
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
+MYAK G + + VF+ ++EK+ SWTS+I G NG +ALELF M++ +P+ V
Sbjct: 316 DMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYV 375
Query: 133 TFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMK 192
TF+ LSACSH+GLV++G ++F SM Y +KP +EHY C +DL+GRAG L++A E
Sbjct: 376 TFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARA 435
Query: 193 LPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXX-XXXXXXXIYASADR 251
+P++ D I + ALLS+C +GN+++ A+ L +YAS D+
Sbjct: 436 MPERPDSDI---WAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDK 492
Query: 252 WEDVNKVRSKMKDLGIKKVPGYS 274
W++V+K+R MK I K G S
Sbjct: 493 WDNVSKIREVMKRRRISKTIGRS 515
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 79/294 (26%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGAL-----EHGRWIHDY 55
MI+GY++ E + L M G K D + + +L G+ R +H
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 56 VIENRIMVDTVVGTALIEMYAKSG------------------C-------------VEKS 84
+I+ + +D V+ TAL++ Y KSG C VE +
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDA 225
Query: 85 LEVFNGLKEKDTASWTSIICGLAMNGKTNK-ALELFEAMEKLGAKPDDVTFITVLSACS- 142
E+FN K KD + +++ G + +G+T K +++++ +M++ G P+ TF +V+ ACS
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 143 ----------HAGLVEEG------------------------RKLFHSMSSKYHIKPNLE 168
HA +++ G R++F M K N+
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK-----NVF 340
Query: 169 HYGCFIDLLGRAGLLHEAEELVMKLPD-QTDEIIVPLYGALLSACRTYGNIDMG 221
+ ID G+ G EA EL ++ + + + V GA LSAC G +D G
Sbjct: 341 SWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGA-LSACSHSGLVDKG 393
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 5/180 (2%)
Query: 22 QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCV 81
V + P K+I AL S A + G+ IH +I+ D + L+ ++ K GC+
Sbjct: 27 NVSSLSPAKYIAGALQEHI-NSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCL 85
Query: 82 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
+ +VF+ L + +++ +I G +G + L L + M G K D T VL A
Sbjct: 86 SYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKAS 145
Query: 142 SHAG----LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
+ G L +L H+ K ++ + +D ++G L A + + D+
Sbjct: 146 NSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDEN 205
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/279 (35%), Positives = 155/279 (55%), Gaps = 3/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G +Q N +E I F +M G +P+ + +LL S L+ G+ IH + I N
Sbjct: 337 MISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG 396
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V T++I+ YAK G + + VF+ K++ +WT+II A++G ++ A LF+
Sbjct: 397 ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFD 456
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ LG KPDDVT VLSA +H+G + + +F SM +KY I+P +EHY C + +L RA
Sbjct: 457 QMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRA 516
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +A E + K+P + I ++GALL+ G++++ L
Sbjct: 517 GKLSDAMEFISKMP---IDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYT 573
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
+Y A RWE+ VR+KMK +G+KK+PG S I+ E
Sbjct: 574 IMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETE 612
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GY Q F++ ++ M KP+ V+++ C QS L G +H +IEN
Sbjct: 204 MISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN 263
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I +D + A+I YAK G ++ + +F+ + EKD+ ++ +II G +G +A+ LF
Sbjct: 264 HIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALF 323
Query: 120 EAME-------------------------------KLGAKPDDVTFITVLSACSHAGLVE 148
ME + G++P+ VT ++L + +++ ++
Sbjct: 324 SEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLK 383
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGAL 208
G+++ H+ + + N+ ID + G L A+ + D++ + + A+
Sbjct: 384 GGKEI-HAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRS----LIAWTAI 438
Query: 209 LSACRTYGNID 219
++A +G+ D
Sbjct: 439 ITAYAVHGDSD 449
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 9/196 (4%)
Query: 25 GVKPDKF---IVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCV 81
+PD V+ L+GC R +H +VI D VG +I Y K +
Sbjct: 124 AARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNI 183
Query: 82 EKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGA-KPDDVTFITVLSA 140
E + +VF+ + E+D SW S+I G + +G ++++AM KP+ VT I+V A
Sbjct: 184 ESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQA 243
Query: 141 CSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEI 200
C + + G ++ H + HI+ +L I + G L A L D+ E
Sbjct: 244 CGQSSDLIFGLEV-HKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALF----DEMSEK 298
Query: 201 IVPLYGALLSACRTYG 216
YGA++S +G
Sbjct: 299 DSVTYGAIISGYMAHG 314
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 159/294 (54%), Gaps = 3/294 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GYVQ + +EA+ L+ M+ G+ P+ + ++L C+ LE G+ +H + I++
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHG 453
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ +G+AL MY+K G +E VF KD SW ++I GL+ NG+ ++ALELFE
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 513
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G +PDDVTF+ ++SACSH G VE G F+ MS + + P ++HY C +DLL RA
Sbjct: 514 EMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRA 573
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA+E + + + L+ LLSAC+ +G ++G L
Sbjct: 574 GQLKEAKEFI---ESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYV 630
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSL 294
IY + R DV +V M+ G+ K G S I+L+ + VG H +
Sbjct: 631 QLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPM 684
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 87/153 (56%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GY Q EA+ LF M G+KP ++ +V +L C+ LE G+ +H ++++
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG 352
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
TAL++MYAK+GC+ + + F+ L+E+D A WTS+I G N +AL L+
Sbjct: 353 FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M+ G P+D T +VL ACS +E G+++
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGKQV 445
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 115/213 (53%), Gaps = 9/213 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDM---QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVI 57
M++GY R +EAI +F + G D ++ A+L+ A + + GR IH I
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITI 248
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+N ++ + AL+ MY+K + ++ ++F+ ++++ +W++++ G + NG++ +A++
Sbjct: 249 KNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVK 308
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
LF M G KP + T + VL+ACS +EEG++L HS K + +L +D+
Sbjct: 309 LFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL-HSFLLKLGFERHLFATTALVDMY 367
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
+AG L +A K D E V L+ +L+S
Sbjct: 368 AKAGCLADAR----KGFDCLQERDVALWTSLIS 396
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Query: 1 MINGYVQFNRFDEA---IALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVI 57
+I GY Q + + LF +M+ + + P+ + + + + + GR H V+
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ D V T+L+ MY K+G VE L+VF + E++T +W++++ G A G+ +A++
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 118 LFEAM--EKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+F EK D F VLS+ + V GR++
Sbjct: 206 VFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 4/174 (2%)
Query: 26 VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSL 85
+ P ++ LT +Q L GR +H +I L+ YAK G + K+
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 86 EVFNGLKEKDTASWTSIICGLAMNGKTNKA---LELFEAMEKLGAKPDDVTFITVLSACS 142
+FN + KD SW S+I G + NG + + ++LF M P+ T + A S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 143 HAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
GR+ H++ K ++ + + +AGL+ + ++ +P++
Sbjct: 130 SLQSSTVGRQA-HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPER 182
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 153/276 (55%), Gaps = 4/276 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M GYVQ + +EA+ LF ++Q+ +PD+F ++T +++ G+ H +++
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + + AL++MYAK G E + + F+ +D W S+I A +G+ KAL++ E
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLE 645
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G +P+ +TF+ VLSACSHAGLVE+G K F M ++ I+P EHY C + LLGRA
Sbjct: 646 KMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIEPETEHYVCMVSLLGRA 704
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L++A EL+ K+P + I+ + +LLS C GN+++ E A
Sbjct: 705 GRLNKARELIEKMPTKPAAIV---WRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFT 761
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
IYAS W + KVR +MK G+ K PG S I
Sbjct: 762 MLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 9/193 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G V+ R ++ LF + V PD +I+ +L+ C+ LE G+ IH +++
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +D + LI+ Y K G V + ++FNG+ K+ SWT+++ G N +A+ELF
Sbjct: 280 LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFT 339
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNL--EHY--GCFIDL 176
+M K G KPD ++L++C A L G F + Y IK NL + Y ID+
Sbjct: 340 SMSKFGLKPDMYACSSILTSC--ASLHALG---FGTQVHAYTIKANLGNDSYVTNSLIDM 394
Query: 177 LGRAGLLHEAEEL 189
+ L +A ++
Sbjct: 395 YAKCDCLTDARKV 407
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 101/192 (52%), Gaps = 8/192 (4%)
Query: 11 FDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRW----IHDYVIENRIMVDT 65
++E++ +F + + R P+++I+ + + C SG GRW + +++++ D
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 66 VVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKL 125
VGT LI+ Y K G ++ + VF+ L EK T +WT++I G G++ +L+LF + +
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 126 GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHE 185
PD TVLSACS +E G+++ H+ +Y ++ + ID + G +
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQI-HAHILRYGLEMDASLMNVLIDSYVKCGRVIA 302
Query: 186 AEELVMKLPDQT 197
A +L +P++
Sbjct: 303 AHKLFNGMPNKN 314
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 4/191 (2%)
Query: 1 MINGYVQFN---RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVI 57
MI GY + EA+ +F DM+ R ++P V+LL A +L + IH +
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ + +D G+ALI++Y+ C++ S VF+ +K KD W S+ G + +AL
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALN 541
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
LF ++ +PD+ TF +++A + V+ G++ FH K ++ N +D+
Sbjct: 542 LFLELQLSRERPDEFTFANMVTAAGNLASVQLGQE-FHCQLLKRGLECNPYITNALLDMY 600
Query: 178 GRAGLLHEAEE 188
+ G +A +
Sbjct: 601 AKCGSPEDAHK 611
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 98/201 (48%), Gaps = 8/201 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++GY Q EA+ LF M G+KPD + ++LT CA AL G +H Y I+
Sbjct: 321 LLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN 380
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICG---LAMNGKTNKALE 117
+ D+ V +LI+MYAK C+ + +VF+ D + ++I G L + ++AL
Sbjct: 381 LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALN 440
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEG-RKLFHSMSSKYHIKPNLEHYGCFIDL 176
+F M +P +TF+++L A A L G K H + KY + ++ ID+
Sbjct: 441 IFRDMRFRLIRPSLLTFVSLLRA--SASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDV 498
Query: 177 LGRAGLLHEAEELV--MKLPD 195
L ++ + MK+ D
Sbjct: 499 YSNCYCLKDSRLVFDEMKVKD 519
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 181 bits (458), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 150/276 (54%), Gaps = 3/276 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY Q + LF DM + G D F + ++L A S G +H Y+ +
Sbjct: 623 LISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIG 682
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VG++L+ MY+K G ++ + F+ + D +WT++I A +GK N+AL+++
Sbjct: 683 LCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYN 742
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ G KPD VTF+ VLSACSH GLVEE +SM Y I+P HY C +D LGR+
Sbjct: 743 LMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRS 802
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EAE + + + D ++ +G LL+AC+ +G +++G+ A
Sbjct: 803 GRLREAESFINNMHIKPDALV---WGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYI 859
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
I A W++V + R MK G++K PG+SS+
Sbjct: 860 SLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 4/195 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI + Q + +AI LF M G++ D+F V +LL+ L G+ +H Y +++
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSG 480
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+++D VG++L +Y+K G +E+S ++F G+ KD A W S+I G G +A+ LF
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G PD+ T VL+ CS + G+++ H + + I ++ +++ +
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI-HGYTLRAGIDKGMDLGSALVNMYSKC 599
Query: 181 GLLHEAEELVMKLPD 195
G L A ++ +LP+
Sbjct: 600 GSLKLARQVYDRLPE 614
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 2/202 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G ++ + LF +M V KPD + ++L CA L G+ + VI+
Sbjct: 222 IIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG 281
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V TA++++YAK G + +++EVF+ + SWT ++ G + ALE+F+
Sbjct: 282 AE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFK 340
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G + ++ T +V+SAC +V E ++ H+ K + I + ++
Sbjct: 341 EMRHSGVEINNCTVTSVISACGRPSMVCEASQV-HAWVFKSGFYLDSSVAAALISMYSKS 399
Query: 181 GLLHEAEELVMKLPDQTDEIIV 202
G + +E++ L D + IV
Sbjct: 400 GDIDLSEQVFEDLDDIQRQNIV 421
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G+ ++ EAI LF +M G PD+ + A+LT C+ +L G+ IH Y +
Sbjct: 522 MISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAG 581
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I +G+AL+ MY+K G ++ + +V++ L E D S +S+I G + +G LF
Sbjct: 582 IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFR 641
Query: 121 AMEKLGAKPDDVTFITVLSA 140
M G D ++L A
Sbjct: 642 DMVMSGFTMDSFAISSILKA 661
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 94/200 (47%), Gaps = 8/200 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY Q F+E++ F M G + ++ ++++ C+ A + + I+
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMG 180
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
VV +ALI++++K+ E + +VF + W +II G N +LF
Sbjct: 181 YFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFH 240
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEH-YGC--FIDLL 177
M KPD T+ +VL+AC+ +E+ R F + IK E + C +DL
Sbjct: 241 EMCVGFQKPDSYTYSSVLAACAS---LEKLR--FGKVVQARVIKCGAEDVFVCTAIVDLY 295
Query: 178 GRAGLLHEAEELVMKLPDQT 197
+ G + EA E+ ++P+ +
Sbjct: 296 AKCGHMAEAMEVFSRIPNPS 315
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/296 (36%), Positives = 160/296 (54%), Gaps = 12/296 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G VQ R + A+ F M +KP+ F + + L GC+ E GR IH V +
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG 398
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D G+ LI++Y K GC + + VF+ L E D S ++I A NG +AL+LFE
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFE 458
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M LG +P+DVT ++VL AC+++ LVEEG +LF S + N +HY C +DLLGRA
Sbjct: 459 RMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTN-DHYACMVDLLGRA 517
Query: 181 GLLHEAEELVMKLPDQTDEIIVP---LYGALLSACRTYGNIDMGERLATTLXXXXXXXXX 237
G L EAE L T E+I P L+ LLSAC+ + ++M ER+ +
Sbjct: 518 GRLEEAEML-------TTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEG 570
Query: 238 XXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVG-AFSH 292
+YAS +W V +++SKMKD+ +KK P S +++ ++ G FSH
Sbjct: 571 TLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSH 626
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 1/181 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q EA+ F M V V+P+++ ++L C + +G+ IH ++++
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
T+L+ MY + V+ SL VF ++ + SWTS+I GL NG+ AL F
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + KP+ T + L CS+ + EEGR++ H + +KY + IDL G+
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI-HGIVTKYGFDRDKYAGSGLIDLYGKC 416
Query: 181 G 181
G
Sbjct: 417 G 417
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 97/199 (48%), Gaps = 4/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I ++ R EA+ ++ M V PD++ + ++ + + + H +
Sbjct: 136 LIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILG 195
Query: 61 IMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ V V VG+AL++MY K G ++ V + ++EKD T++I G + G+ +A++ F
Sbjct: 196 LEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAF 255
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
++M +P++ T+ +VL +C + + G KL H + K + L + + R
Sbjct: 256 QSMLVEKVQPNEYTYASVLISCGNLKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLR 314
Query: 180 AGLLHEAEEL--VMKLPDQ 196
L+ ++ + ++ P+Q
Sbjct: 315 CSLVDDSLRVFKCIEYPNQ 333
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 48/87 (55%)
Query: 66 VVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKL 125
+ G+ L++ K G ++ + +VF+G+ E+ +W S+I L + ++ +A+E++ M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 126 GAKPDDVTFITVLSACSHAGLVEEGRK 152
PD+ T +V A S L +E ++
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQR 186
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 156/292 (53%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ +VQ + + A LF + ++P+++ V +++ CA AL G I Y I++
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG 489
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I T V T+ I MYAKSG + + +VF ++ D A+++++I LA +G N+AL +FE
Sbjct: 490 IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFE 549
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+M+ G KP+ F+ VL AC H GLV +G K F M + Y I PN +H+ C +DLLGR
Sbjct: 550 SMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRT 609
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +AE L++ Q + + ALLS+CR Y + +G+R+A L
Sbjct: 610 GRLSDAENLILSSGFQDHPVT---WRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYV 666
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IY + +VR M+D G+KK P S I + +S V SH
Sbjct: 667 LLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSH 718
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 114/230 (49%), Gaps = 22/230 (9%)
Query: 1 MINGYVQFNRF-----DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDY 55
MI+G++Q + EA LF DMQ RG++P +L C+ + LE+GR IH
Sbjct: 324 MISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHAL 383
Query: 56 VIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKA 115
+ +N D +G+ALIE+YA G E ++ F ++D ASWTS+I N + A
Sbjct: 384 ICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESA 443
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCF-- 173
+LF + +P++ T ++SAC+ + G ++ Y IK ++ +
Sbjct: 444 FDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKT 498
Query: 174 --IDLLGRAGLLHEAEELVMKL--PDQTDEIIVPLYGALLSACRTYGNID 219
I + ++G + A ++ +++ PD V Y A++S+ +G+ +
Sbjct: 499 SSISMYAKSGNMPLANQVFIEVQNPD------VATYSAMISSLAQHGSAN 542
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 104/213 (48%), Gaps = 8/213 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY Q +++A+ LF + + +K DKF L C + L+ G +H V+ N
Sbjct: 119 LISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG 178
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + LI+MY+K G +++++ +F+ E+D SW S+I G G + L L
Sbjct: 179 LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLA 238
Query: 121 AMEKLGAKPDDVTFITVLSACS---HAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
M + G +VL AC + G +E+G + H ++K ++ ++ +D+
Sbjct: 239 KMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI-HCYTAKLGMEFDIVVRTALLDMY 297
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
+ G L EA +L +P + V Y A++S
Sbjct: 298 AKNGSLKEAIKLFSLMPSKN----VVTYNAMIS 326
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 98/174 (56%), Gaps = 9/174 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCA---QSGALEHGRWIHDYVI 57
+I+GYV+ +E + L M G+ + + ++L C G +E G IH Y
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICG-LAMNGKTN--- 113
+ + D VV TAL++MYAK+G +++++++F+ + K+ ++ ++I G L M+ T+
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 114 -KALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPN 166
+A +LF M++ G +P TF VL ACS A +E GR++ H++ K + + +
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQI-HALICKNNFQSD 392
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 180 bits (457), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 151/278 (54%), Gaps = 3/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY Q ++AI+LF +MQ P+ + +L+ CAQ GAL G+W+HD V
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V TALI MYAK G + ++ +F+ + +K+ +W ++I G ++G+ +AL +F
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G P VTF+ VL ACSHAGLV+EG ++F+SM +Y +P+++HY C +D+LGRA
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L A + + + + + + LL ACR + + ++ ++ L
Sbjct: 571 GHLQRALQFIEAMSIEPGSSV---WETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHV 627
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
I+++ + VR K + K PGY+ I++
Sbjct: 628 LLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + +++LF ++ + G + +V+L+ SG L IH Y +++
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYCLKSN 349
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V TAL +Y+K +E + ++F+ EK SW ++I G NG T A+ LF
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 409
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+K P+ VT +LSAC+ G + G K H + + ++ I + +
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLG-KWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 181 GLLHEAEEL 189
G + EA L
Sbjct: 469 GSIAEARRL 477
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 11/212 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GY + + E+I +F D+ + D ++ +L A+ L G IH +
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
V T I +Y+K G ++ +F ++ D ++ ++I G NG+T +L LF
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPN-LEHYGCFIDLLG 178
+ + GA+ T ++++ H L+ H Y +K N L H L
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLIYA----IHG----YCLKSNFLSHASVSTALTT 362
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
L+E E KL D++ E +P + A++S
Sbjct: 363 VYSKLNEIES-ARKLFDESPEKSLPSWNAMIS 393
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 151/276 (54%), Gaps = 3/276 (1%)
Query: 4 GYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMV 63
G Q +EAI F M GV+ D +V A+L +L G+ +H VI+ +
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSG 390
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 123
+T V LI MY+K G + S VF + +++ SW S+I A +G AL+L+E M
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMT 450
Query: 124 KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLL 183
L KP DVTF+++L ACSH GL+++GR+L + M + I+P EHY C ID+LGRAGLL
Sbjct: 451 TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLL 510
Query: 184 HEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXX 243
EA+ + LP + D ++ ALL AC +G+ ++GE A L
Sbjct: 511 KEAKSFIDSLPLKPD---CKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIA 567
Query: 244 XIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
IY+S +W++ K +MK +G+ K G SSI++E
Sbjct: 568 NIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIE 603
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G ++ ++ + LF M+ V P+ ++ L C+ S + G+ IH + +
Sbjct: 227 VISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYG 286
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I + + +AL++MY+K G +E + +F E D S T I+ GLA NG +A++ F
Sbjct: 287 IESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFI 346
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G + D VL + G++L HS+ K N I++ +
Sbjct: 347 RMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQL-HSLVIKRKFSGNTFVNNGLINMYSKC 405
Query: 181 GLLHEAEELVMKLPDQ 196
G L +++ + ++P +
Sbjct: 406 GDLTDSQTVFRRMPKR 421
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 92/216 (42%), Gaps = 31/216 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIV------------VALLTGCAQSGALEH 48
+++ Y + + +AI LF +M +R V + LL SG +H
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDH 155
Query: 49 G------------------RWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNG 90
+ IH I + + VG LI Y K GC VF+G
Sbjct: 156 ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDG 215
Query: 91 LKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEG 150
+ ++ + T++I GL N L LF M + P+ VT+++ L+ACS + + EG
Sbjct: 216 MSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEG 275
Query: 151 RKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEA 186
+++ H++ KY I+ L +D+ + G + +A
Sbjct: 276 QQI-HALLWKYGIESELCIESALMDMYSKCGSIEDA 310
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 180 bits (456), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 152/276 (55%), Gaps = 3/276 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ Y Q F+EA+ LF M + V P+++ LL A+ L+ G +H V+++
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+VG AL+ MYAKSG +E + + F+G+ +D +W ++I G + +G +ALE F+
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFD 428
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G P+ +TFI VL ACSH G VE+G F+ + K+ ++P+++HY C + LL +A
Sbjct: 429 RMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKA 488
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G+ +AE+ + P + D V + LL+AC N +G+++A
Sbjct: 489 GMFKDAEDFMRTAPIEWD---VVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYV 545
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
I+A + WE V KVRS M + G+KK PG S I
Sbjct: 546 LLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWI 581
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 36 LLTGCAQSGALEHGRWIHDYVI---ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK 92
LL CA S L G IH ++I ++ D +LI +Y K ++ ++F+ +
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 93 EKDTASWTSIICGLAMNGKTNKALELFEAMEKLG-AKPDDVTFITVLSACSHAGLVEEGR 151
E++ SW +++ G +G + L+LF++M G ++P++ V +CS++G +EEG+
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGK 156
Query: 152 KLFHSMSSKY 161
+ FH KY
Sbjct: 157 Q-FHGCFLKY 165
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Query: 1 MINGYVQFNRFD-EAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
M+ GY Q + FD E + LF M G +P++F+ + C+ SG +E G+ H ++
Sbjct: 106 MMKGY-QNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLK 164
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
++ V L+ MY+ +++ V + L D + ++S + G G + L++
Sbjct: 165 YGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDV 224
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+++T+++ L S+ + ++ HS ++ +E G I++ G
Sbjct: 225 LRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQV-HSRMVRFGFNAEVEACGALINMYG 283
Query: 179 RAGLLHEAEEL 189
+ G + A+ +
Sbjct: 284 KCGKVLYAQRV 294
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/281 (37%), Positives = 156/281 (55%), Gaps = 12/281 (4%)
Query: 1 MINGYVQFNRF-DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I G+ Q N +A +F DM K D+ +V ++L C ++ GR IH + +++
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 60 -RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+I D +G +LI+MYAKSG +E ++ F +KEKD SWTS+I G +G KA++L
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+ ME KP+DVTF+++LSACSH G E G K++ +M +K+ I+ EH C ID+L
Sbjct: 406 YNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLA 465
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPL----YGALLSACRTYGNIDMGERLATTLXXXXXX 234
R+G L EA L+ ++ E IV L +GA L ACR +GN+ + + AT L
Sbjct: 466 RSGYLEEAYALI-----RSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPR 520
Query: 235 XXXXXXXXXXIYASADRWEDVNKVRSKMKDLG-IKKVPGYS 274
+YA+ W++ R MK+ G K PGYS
Sbjct: 521 KPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYS 561
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ + + +A+ LF +M VK ++F ++L C G L+ G IH V +
Sbjct: 84 MISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGN 143
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +V +AL+ +YA+ G +E++ F+ +KE+D SW ++I G N + + LF+
Sbjct: 144 CAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQ 203
Query: 121 AMEKLGAKPDDVTFITVLSA 140
M G KPD TF ++L A
Sbjct: 204 LMLTEGKKPDCFTFGSLLRA 223
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 9/229 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY D + +LF M G KPD F +LL LE +H I+
Sbjct: 185 MIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLG 244
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLA-MNGKTNKALELF 119
+ + +L+ Y K G + + ++ G K++D S T++I G + N T+ A ++F
Sbjct: 245 FGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIF 304
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M ++ K D+V ++L C+ V GR++ I+ ++ ID+ +
Sbjct: 305 KDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAK 364
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGN----IDMGERL 224
+G E E+ V+ ++ E V + +L++ +GN ID+ R+
Sbjct: 365 SG---EIEDAVLAF-EEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM 409
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Query: 52 IHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGK 111
IH I N + + LI++Y K G V+ + ++F+ + ++D SWT++I + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 112 TNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYG 171
AL LF+ M + K + T+ +VL +C G ++EG ++ H K + NL
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQI-HGSVEKGNCAGNLIVRS 152
Query: 172 CFIDLLGRAGLLHEAE 187
+ L R G + EA
Sbjct: 153 ALLSLYARCGKMEEAR 168
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 154/268 (57%), Gaps = 8/268 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GY+ EA+ +F M G++PDK VA+ + A+ + +HGR +H +VI
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPDK---VAISSVLARVLSFKHGRQLHGWVIRRG 323
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + V ALI +Y+K G + ++ +F+ + E+DT SW +II + K + L+ FE
Sbjct: 324 MEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFE 380
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + AKPD +TF++VLS C++ G+VE+G +LF MS +Y I P +EHY C ++L GRA
Sbjct: 381 QMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRA 440
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G++ EA ++++ + E ++GALL AC +GN D+GE A L
Sbjct: 441 GMMEEAYSMIVQ--EMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFE 498
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIK 268
IY+ A R EDV +VR M D G++
Sbjct: 499 LLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 81/139 (58%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY + ++++A+AL+ M GVKPD+F +L C G+++ G IH +++
Sbjct: 166 LISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG 225
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V AL+ MYAK G + K+ VF+ + KD SW S++ G +G ++AL++F
Sbjct: 226 FGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFR 285
Query: 121 AMEKLGAKPDDVTFITVLS 139
M + G +PD V +VL+
Sbjct: 286 LMVQNGIEPDKVAISSVLA 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 32 IVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGL 91
I +LL C A++HG +H + + + + + L+ +YA G E + EVF+ +
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 92 KEKDTA--SWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
++D++ +W S+I G A G+ A+ L+ M + G KPD TF VL AC G V+
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 150 GRKL 153
G +
Sbjct: 214 GEAI 217
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/293 (35%), Positives = 160/293 (54%), Gaps = 5/293 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G + +E + LF M+ G +P + + CA GA +G+ H +++
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
G ALI MYAK G VE++ +VF + D+ SW ++I L +G +A++++E
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M K G +PD +T +TVL+ACSHAGLV++GRK F SM + Y I P +HY IDLL R+
Sbjct: 508 EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRS 567
Query: 181 GLLHEAEELVMKLP-DQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G +AE ++ LP T EI + ALLS CR +GN+++G A L
Sbjct: 568 GKFSDAESVIESLPFKPTAEI----WEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTY 623
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
++A+ +WE+V +VR M+D G+KK S I++E ++ V SH
Sbjct: 624 MLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSH 676
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 31/224 (13%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVI--- 57
MI+GYV + EA+ + M G++ D+F +++ CA +G L+ G+ +H YV+
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE 316
Query: 58 ---------------------ENRIMV------DTVVGTALIEMYAKSGCVEKSLEVFNG 90
E R + D V AL+ Y SG + ++ +F
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 91 LKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEG 150
+KEK+ SW +I GLA NG + L+LF M++ G +P D F + +C+ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 151 RKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLP 194
++ +H+ K +L I + + G++ EA ++ +P
Sbjct: 437 QQ-YHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP 479
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 108/255 (42%), Gaps = 43/255 (16%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALE-HGRWIHDYVIEN 59
MI G+ N AI LF M+ G KPD F ++L G A E H +++
Sbjct: 119 MITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKS 178
Query: 60 RIMVDTVVGTALIEMYAKSGC----VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTN-- 113
T V AL+ +Y+K + + +VF+ + EKD SWT+++ G NG +
Sbjct: 179 GAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLG 238
Query: 114 ------------------------------KALELFEAMEKLGAKPDDVTFITVLSACSH 143
+ALE+ M G + D+ T+ +V+ AC+
Sbjct: 239 EELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACAT 298
Query: 144 AGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVP 203
AGL++ G+++ + + + ++ + L + G EA + K+P + +
Sbjct: 299 AGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAKD----LV 352
Query: 204 LYGALLSACRTYGNI 218
+ ALLS + G+I
Sbjct: 353 SWNALLSGYVSSGHI 367
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 14 AIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIE 73
A A+ G++ G +P I+ L+ +S L + R + D + E D + T ++
Sbjct: 33 ARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP----DKIARTTMVS 88
Query: 74 MYAKSGCVEKSLEVFN--GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
Y SG + + VF + +DT + ++I G + N A+ LF M+ G KPD+
Sbjct: 89 GYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDN 148
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSK 160
TF +VL+ + E+ FH+ + K
Sbjct: 149 FTFASVLAGLALVADDEKQCVQFHAAALK 177
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 178 bits (452), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 98/294 (33%), Positives = 164/294 (55%), Gaps = 4/294 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKP-DKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+GY Q +A+ LF +M+ + V+ D F VV+LL C+ +GAL G+ IH VI +
Sbjct: 418 IISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRS 477
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I ++V TAL++MY+K G +E + F+ + KD SW +I G +GK + ALE++
Sbjct: 478 FIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIY 537
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
G +P+ V F+ VLS+CSH G+V++G K+F SM + ++PN EH C +DLL R
Sbjct: 538 SEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCR 597
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
A + +A + + + + G +L ACR G ++ + + +
Sbjct: 598 AKRIEDAFKFY---KENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHY 654
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHS 293
+A+ RW+DV++ ++M+ LG+KK+PG+S I++ G + + SHS
Sbjct: 655 VKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 2/189 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G ++ R ++A+ +F +M G + +++ CAQ G+ + G +H YV+ +
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG 376
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+DT +LI MYAK G ++KSL +F + E+D SW +II G A N KAL LFE
Sbjct: 377 YTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFE 436
Query: 121 AME-KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M+ K + D T +++L ACS AG + G KL H + + I+P +D+ +
Sbjct: 437 EMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSK 495
Query: 180 AGLLHEAEE 188
G L A+
Sbjct: 496 CGYLEAAQR 504
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY E + L M+ G++PD+ A L+ LE GR +H +++
Sbjct: 216 MISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTG 275
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
VD + TALI MY K G E S V + KD WT +I GL G+ KAL +F
Sbjct: 276 FDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFS 335
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEG 150
M + G+ +V+++C+ G + G
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLG 365
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 10/207 (4%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
+ ++ F M + PD F +LL CA L G IH V+ N D + ++L+
Sbjct: 29 QVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLV 88
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
+YAK G + + +VF ++E+D WT++I + G +A L M G KP V
Sbjct: 89 NLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPV 148
Query: 133 TFITVLSACSHAGLVEEGR-KLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
T + +LS G++E + + H + Y ++ ++L + + +A++L
Sbjct: 149 TLLEMLS-----GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLF- 202
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNI 218
DQ ++ + + ++S + GN+
Sbjct: 203 ---DQMEQRDMVSWNTMISGYASVGNM 226
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y + EA +L +M+ +G+KP ++ +L+G + L+ +HD+ +
Sbjct: 118 MIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQ---CLHDFAVIYG 174
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V +++ +Y K V + ++F+ ++++D SW ++I G A G ++ L+L
Sbjct: 175 FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLY 234
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M G +PD TF LS +E GR L
Sbjct: 235 RMRGDGLRPDQQTFGASLSVSGTMCDLEMGRML 267
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 156/279 (55%), Gaps = 3/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q +E F M+ G KP F + +LL+ +E GR +H +
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFG 441
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ++ V ++LI MY+K G ++++ +F D S T++I G A +GK+ +A++LFE
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFE 501
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
K+G +PD VTFI+VL+AC+H+G ++ G F+ M Y+++P EHYGC +DLL RA
Sbjct: 502 KSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRA 561
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +AE+++ ++ + D+++ + LL AC+ G+I+ G R A +
Sbjct: 562 GRLSDAEKMINEMSWKKDDVV---WTTLLIACKAKGDIERGRRAAERILELDPTCATALV 618
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
IY+S E+ VR MK G+ K PG+SSI ++
Sbjct: 619 TLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIK 657
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 82/155 (52%), Gaps = 2/155 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQV--RGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
+I YV N DEA+ LF M+V V PD ++ +L C QS + +G +H Y ++
Sbjct: 77 IIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVK 136
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
++ VG++L++MY + G ++KS VF+ + ++ +WT+II GL G+ + L
Sbjct: 137 TSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTY 196
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
F M + D TF L AC+ V+ G+ +
Sbjct: 197 FSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 72/153 (47%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G V R+ E + F +M D + L CA +++G+ IH +VI
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +L MY + G ++ L +F + E+D SWTS+I G+ KA+E F
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFI 299
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M P++ TF ++ SAC+ + G +L
Sbjct: 300 KMRNSQVPPNEQTFASMFSACASLSRLVWGEQL 332
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 90/186 (48%), Gaps = 1/186 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I Y + + +A+ F M+ V P++ ++ + CA L G +H V+
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V ++++MY+ G + + +F G++ +D SW++II G G + + F
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G KP D ++LS + ++E GR++ H+++ + ++ N I++ +
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLINMYSKC 459
Query: 181 GLLHEA 186
G + EA
Sbjct: 460 GSIKEA 465
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 177 bits (448), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 156/278 (56%), Gaps = 5/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ + R EA+ LF +M +G PD+ VV +L A G L+ G+WIH +
Sbjct: 205 MISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSG 264
Query: 61 IMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ D + VG AL++ Y KSG +E + +F ++ ++ SW ++I G A+NGK ++LF
Sbjct: 265 LFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLF 324
Query: 120 EAM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+AM E+ P++ TF+ VL+ CS+ G VE G +LF M ++ ++ EHYG +DL+
Sbjct: 325 DAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMS 384
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
R+G + EA + + +P + ++G+LLSACR++G++ + E A L
Sbjct: 385 RSGRITEAFKFLKNMPVNAN---AAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGN 441
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
+YA RW+DV KVR+ MK ++K G S+I
Sbjct: 442 YVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 35/240 (14%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN--------RIMV- 63
E+++ F M+ RG+ D++ LL C+ L G+ +H +I RI V
Sbjct: 85 ESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVV 144
Query: 64 ----------------------DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTS 101
+ VV +I + SG VE+ L +F + E+ SW S
Sbjct: 145 ELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNS 204
Query: 102 IICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKY 161
+I L+ G+ +ALELF M G PD+ T +TVL + G+++ G+ + + S
Sbjct: 205 MISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSG 264
Query: 162 HIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMG 221
K + +D ++G L A + K+ + V + L+S G + G
Sbjct: 265 LFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRN----VVSWNTLISGSAVNGKGEFG 320
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 152/280 (54%), Gaps = 4/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GYV + ++A LF M G+ PDKF +L CA + G+ IH VI+
Sbjct: 574 IISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE 633
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D + + L++MY+K G + S +F +D +W ++ICG A +GK +A++LFE
Sbjct: 634 LQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFE 693
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M KP+ VTFI++L AC+H GL+++G + F+ M Y + P L HY +D+LG++
Sbjct: 694 RMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKS 753
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTY-GNIDMGERLATTLXXXXXXXXXXX 239
G + A EL+ ++P + D++I + LL C + N+++ E L
Sbjct: 754 GKVKRALELIREMPFEADDVI---WRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAY 810
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
+YA A WE V+ +R M+ +KK PG S ++L+
Sbjct: 811 TLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELK 850
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY Q +A+ LF + G+ D+ + + CA L G I+ I++
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +D V A I+MY K + ++ VF+ ++ +D SW +II NGK + L LF
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC-FIDLLGR 179
+M + +PD+ TF ++L AC+ G + G ++ HS K + N GC ID+ +
Sbjct: 473 SMLRSRIEPDEFTFGSILKACT-GGSLGYGMEI-HSSIVKSGMASN-SSVGCSLIDMYSK 529
Query: 180 AGLLHEAEEL 189
G++ EAE++
Sbjct: 530 CGMIEEAEKI 539
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++GY+Q ++I +F DM G++ D +L C+ G IH V+
Sbjct: 151 MLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVG 210
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V +AL++MYAK +SL VF G+ EK++ SW++II G N + AL+ F+
Sbjct: 211 CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFK 270
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF-HSMSSKY 161
M+K+ A + +VL +C+ + G +L H++ S +
Sbjct: 271 EMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
E + LF M ++PD+F ++L C G+L +G IH ++++ + ++ VG +LI
Sbjct: 466 ETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLI 524
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTAS--------------------WTSIICGLAMNGKT 112
+MY+K G +E++ ++ + ++ S W SII G M ++
Sbjct: 525 DMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQS 584
Query: 113 NKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC 172
A LF M ++G PD T+ TVL C++ G+++ H+ K ++ ++
Sbjct: 585 EDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI-HAQVIKKELQSDVYICST 643
Query: 173 FIDLLGRAGLLHEAEELVMK 192
+D+ + G LH++ + K
Sbjct: 644 LVDMYSKCGDLHDSRLMFEK 663
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 1/186 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G VQ N A+ F +MQ + I ++L CA L G +H + +++
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D +V TA ++MYAK ++ + +F+ + + S+ ++I G + KAL LF
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+ G D+++ V AC+ + EG +++ ++ K + ++ ID+ G+
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-GLAIKSSLSLDVCVANAAIDMYGKC 430
Query: 181 GLLHEA 186
L EA
Sbjct: 431 QALAEA 436
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 21 MQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGC 80
M + G +P F++ LL S + D + + D V +I Y+KS
Sbjct: 74 MIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP----LRDVVSWNKMINGYSKSND 129
Query: 81 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSA 140
+ K+ FN + +D SW S++ G NG++ K++E+F M + G + D TF +L
Sbjct: 130 MFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 141 CS 142
CS
Sbjct: 190 CS 191
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 177 bits (448), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/279 (34%), Positives = 161/279 (57%), Gaps = 8/279 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDM---QVRGVKPDKFIVVALLTGCAQ--SGALEHGRWIHDY 55
+ING+ + +A+ +FG+M + + P++ V++L+ CA G + G+ IH Y
Sbjct: 189 VINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGY 248
Query: 56 VIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKA 115
V+ I++ T +GTAL++MY K+G +E +L +F+ +++K +W +II LA NG+ +A
Sbjct: 249 VMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQA 308
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
LE+FE M+ P+ +T + +L+AC+ + LV+ G +LF S+ S+Y I P EHYGC +D
Sbjct: 309 LEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVD 368
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXX 235
L+GRAGLL +A + LP + D ++ GALL AC+ + N ++G + L
Sbjct: 369 LIGRAGLLVDAANFIQSLPFEPDASVL---GALLGACKIHENTELGNTVGKQLIGLQPQH 425
Query: 236 XXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYS 274
A W + K+R M + GI+K+P YS
Sbjct: 426 CGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 107/252 (42%), Gaps = 41/252 (16%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I Y+ + ++ALF M V+P+ +L+ S ++ +G +H ++
Sbjct: 57 LIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRG 116
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D V T+ + Y + G +E S ++F+ + + S++ NG+ + A E F+
Sbjct: 117 FLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQ 176
Query: 121 AM----------------------------------EKLGAKPDDVTFITVLSACSH--A 144
M E+ P++ TF++VLS+C++
Sbjct: 177 RMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQ 236
Query: 145 GLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPL 204
G + G+++ + SK I +D+ G+AG L E+ + + DQ + V
Sbjct: 237 GGIRLGKQIHGYVMSK-EIILTTTLGTALLDMYGKAGDL----EMALTIFDQIRDKKVCA 291
Query: 205 YGALLSACRTYG 216
+ A++SA + G
Sbjct: 292 WNAIISALASNG 303
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 100/298 (33%), Positives = 158/298 (53%), Gaps = 5/298 (1%)
Query: 1 MINGYVQFNRF-DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GY +EA+ F MQ G +PD V + + C+ + + IH I++
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS 374
Query: 60 RIMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
I + + V ALI +Y KSG ++ + VF+ + E + S+ +I G A +G +AL L
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
++ M G P+ +TF+ VLSAC+H G V+EG++ F++M + I+P EHY C IDLLG
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG L EAE + +P + + + ALL ACR + N+ + ER A L
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSVA---WAALLGACRKHKNMALAERAANELMVMQPLAATP 551
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
+YA A +WE++ VR M+ I+K PG S I+++ + +SH + +
Sbjct: 552 YVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIR 609
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 37/264 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y Q +A+AL+ +M +G K D F + ++L L GR H +I+
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 61 IMVDTVVGTALIEMYAKSGCVE---KSLEVFNGLKEKDTASWTSIICGLAMNGK-TNKAL 116
++ VG+ LI+ Y+K G + S +VF + D W ++I G +MN + + +A+
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAV 330
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPN-LEHYGCFID 175
+ F M+++G +PDD +F+ V SACS+ + +++ H ++ K HI N + I
Sbjct: 331 KSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQI-HGLAIKSHIPSNRISVNNALIS 389
Query: 176 LLGRAGLLHEAEELVMKLPD----------------------------QTDEIIVP---L 204
L ++G L +A + ++P+ D I P
Sbjct: 390 LYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKIT 449
Query: 205 YGALLSACRTYGNIDMGERLATTL 228
+ A+LSAC G +D G+ T+
Sbjct: 450 FVAVLSACAHCGKVDEGQEYFNTM 473
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 6/183 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY A+ LF M+ G + D F + L+ C L + +H + +
Sbjct: 111 LISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGG 168
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELF 119
+ V A + Y+K G + +++ VF G+ E +D SW S+I + + KAL L+
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC-FIDLLG 178
+ M G K D T +VL+A + + GR+ FH K N H G ID
Sbjct: 229 KEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ-FHGKLIKAGFHQN-SHVGSGLIDFYS 286
Query: 179 RAG 181
+ G
Sbjct: 287 KCG 289
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 5/131 (3%)
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
+++ YAK + + ++F+ + + DT S+ ++I G A +T A+ LF+ M KLG + D
Sbjct: 80 IVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVD 139
Query: 131 DVTFITVLSA-CSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
T +++A C L+++ H S F+ + GLL EA +
Sbjct: 140 GFTLSGLIAACCDRVDLIKQ----LHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSV 195
Query: 190 VMKLPDQTDEI 200
+ + DE+
Sbjct: 196 FYGMDELRDEV 206
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 154/278 (55%), Gaps = 6/278 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE-- 58
+I GY Q + +EA +F +M + VKPD+FI+V L++ C+Q G E + Y+ +
Sbjct: 275 LILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRM 334
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
N+ VV ALI+M AK G ++++ ++F + ++D S+ S++ G+A++G ++A+ L
Sbjct: 335 NKFSSHYVV-PALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRL 393
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
FE M G PD+V F +L C + LVEEG + F M KY I + +HY C ++LL
Sbjct: 394 FEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLS 453
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
R G L EA EL+ +P + +G+LL C +GN ++ E +A L
Sbjct: 454 RTGKLKEAYELIKSMPFEAH---ASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGS 510
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
IYA+ DRW DV +R KM + GI K+ G S I
Sbjct: 511 YVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 18/201 (8%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ YV+ +EA ++F M R + AL+ G +SG L + + + D + +
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWN----ALVDGLVKSGDLVNAKKLFDEMPKR- 236
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D + T++I+ YAK G + + ++F + D +W+++I G A NG+ N+A ++F
Sbjct: 237 ---DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL---FHSMSSKYHIKPNLEHY--GCFID 175
M KPD+ + ++SACS G E K+ H +K+ HY ID
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALID 348
Query: 176 LLGRAGLLHEAEELVMKLPDQ 196
+ + G + A +L ++P +
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQR 369
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 14/192 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGV-KPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I GY F E +++ M G+ +PD++ ++ C+ +G + G +H V+
Sbjct: 80 LIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRI 139
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D VVGT+ ++ Y K + + +VF + E++ SWT+++ +G+ +A +F
Sbjct: 140 GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF 199
Query: 120 EAMEK--LGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
+ M + LG ++ ++ +G + +KLF M K ++ Y ID
Sbjct: 200 DLMPERNLG------SWNALVDGLVKSGDLVNAKKLFDEMP-----KRDIISYTSMIDGY 248
Query: 178 GRAGLLHEAEEL 189
+ G + A +L
Sbjct: 249 AKGGDMVSARDL 260
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 160/292 (54%), Gaps = 3/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI ++Q ++ +A F + G +PD+ +A+L C G + + IH ++
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + TAL+++Y+K G +E S VF+ + D+ +WT+++ A +G A++ FE
Sbjct: 266 FSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFE 325
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G PD VTF +L+ACSH+GLVEEG+ F +MS +Y I P L+HY C +DLLGR+
Sbjct: 326 LMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRS 385
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL +A L+ ++P + ++GALL ACR Y + +G + A L
Sbjct: 386 GLLQDAYGLIKEMPMEPSS---GVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV 442
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IY+++ W+D +++R+ MK G+ + G S I+ + VG +SH
Sbjct: 443 MLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSH 494
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVR--GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
+I+GY + + M + G +P++ +++++ C G+ E GR IH V++
Sbjct: 103 LISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK 162
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
++ + V A I Y K+G + S ++F L K+ SW ++I NG K L
Sbjct: 163 FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAY 222
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVE-----EGRKLFHSMSSKYHIKPNLEHYGCF 173
F ++G +PD TF+ VL +C G+V G +F S I L
Sbjct: 223 FNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTAL------ 276
Query: 174 IDLLGRAGLLHEAEELVMKL--PDQTDEIIVPLYGALLSACRTYG 216
+DL + G L ++ + ++ PD + A+L+A T+G
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSM------AWTAMLAAYATHG 315
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 14/196 (7%)
Query: 33 VVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSG---CVEKSLEVFN 89
V +L+ ++E R +H V+++ +G L+ Y + G C EK +F+
Sbjct: 34 VSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEK---LFD 90
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAM--EKLGAKPDDVTFITVLSACSHAGLV 147
+ E+D SW S+I G + G K E+ M ++G +P++VTF++++SAC + G
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSK 150
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEA----EELVMK-LPDQTDEIIV 202
EEGR H + K+ + ++ FI+ G+ G L + E+L +K L I++
Sbjct: 151 EEGR-CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVI 209
Query: 203 PLYGALLSACRTYGNI 218
L L Y N+
Sbjct: 210 HLQNGLAEKGLAYFNM 225
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 165/302 (54%), Gaps = 13/302 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHG-RWIHDYVIEN 59
M+ G+ Q + EA+ F M+ G++ D+ V ++ CAQ GA ++ R +
Sbjct: 252 MVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSG 311
Query: 60 RIMVD-TVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
D V+G+ALI+MY+K G VE+++ VF + K+ +++S+I GLA +G+ +AL L
Sbjct: 312 YSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHL 371
Query: 119 FEAM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
F M + KP+ VTF+ L ACSH+GLV++GR++F SM + ++P +HY C +DLL
Sbjct: 372 FHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLL 431
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVP---LYGALLSACRTYGNIDMGERLATTLXXXXXX 234
GR G L EA EL+ + + P ++GALL ACR + N ++ E A L
Sbjct: 432 GRTGRLQEALELIKTMS------VEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPD 485
Query: 235 XXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYS-SIDLEGYGNSGGVGAFSHS 293
+YASA W V +VR +K+ G+KK P S +D G + G +H
Sbjct: 486 IIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHP 545
Query: 294 LT 295
++
Sbjct: 546 MS 547
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 109/248 (43%), Gaps = 36/248 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHD------ 54
+I GY +FDEAIA++G M+ + P F ALL C L GR H
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLR 179
Query: 55 ---YVIENRIMVDTVVG----------------------TALIEMYAKSGCVEKSLEVFN 89
+V M+D V T LI YA+ G +E + E+F
Sbjct: 180 GFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFE 239
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
L KD +WT+++ G A N K +ALE F+ MEK G + D+VT +SAC+ G +
Sbjct: 240 SLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKY 299
Query: 150 G-RKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGAL 208
R + + S Y ++ ID+ + G + EA + M + ++ V Y ++
Sbjct: 300 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKN----VFTYSSM 355
Query: 209 LSACRTYG 216
+ T+G
Sbjct: 356 ILGLATHG 363
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 153/278 (55%), Gaps = 3/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI + ++A++++ M GV D + +VALL+ CA AL G +H + R
Sbjct: 179 MICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR 238
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V ALI+MYAK G +E ++ VFNG++++D +W S+I G ++G +A+ F
Sbjct: 239 CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFR 298
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G +P+ +TF+ +L CSH GLV+EG + F MSS++H+ PN++HYGC +DL GRA
Sbjct: 299 KMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRA 358
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L + E++ D + L+ LL +C+ + N+++GE L
Sbjct: 359 GQLENSLEMIYASSCHEDPV---LWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYV 415
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
IY++A+ + +R ++ ++ VPG+S I++
Sbjct: 416 LMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEI 453
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 2/187 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGV-KPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I G+ + +I + M + V +PD F L C + ++ IH VI +
Sbjct: 77 LIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS 136
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ D +V T+L+ Y+ +G VE + +VF+ + +D SW +IC + G N+AL ++
Sbjct: 137 GFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMY 196
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M G D T + +LS+C+H + G + H ++ + + ID+ +
Sbjct: 197 KRMGNEGVCGDSYTLVALLSSCAHVSALNMG-VMLHRIACDIRCESCVFVSNALIDMYAK 255
Query: 180 AGLLHEA 186
G L A
Sbjct: 256 CGSLENA 262
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 176 bits (445), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 153/281 (54%), Gaps = 4/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G+ Q ++A+ F ++ +K D + ALL C+ L+ G+ IH ++
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELF 119
+ + V ++LI MY+K G +E + + F + K T +W ++I G A +G +L+LF
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M K D VTF +L+ACSH GL++EG +L + M Y I+P +EHY +DLLGR
Sbjct: 499 SQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGR 558
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AGL+++A+EL+ +P D +++ + L CR G I+M ++A L
Sbjct: 559 AGLVNKAKELIESMPLNPDPMVLKTF---LGVCRACGEIEMATQVANHLLEIEPEDHFTY 615
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+Y+ +WE+ V+ MK+ G+KKVPG+S I++
Sbjct: 616 VSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRN 656
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 3/198 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G+ + + A LF MQ V+ D + LL+ C+ G+ +H VI+
Sbjct: 276 MIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG 335
Query: 61 IMVDTVVGTALIEMYAK--SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ T ALI MY + +G +E +L +F LK KD SW SII G A G + A++
Sbjct: 336 LEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKF 395
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F + K DD F +L +CS ++ G+++ H++++K N I +
Sbjct: 396 FSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI-HALATKSGFVSNEFVISSLIVMYS 454
Query: 179 RAGLLHEAEELVMKLPDQ 196
+ G++ A + ++ +
Sbjct: 455 KCGIIESARKCFQQISSK 472
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + ++A LF M+ G D + LL G A + G +H VI+
Sbjct: 72 MISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGG 131
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VG++L++MYAK VE + E F + E ++ SW ++I G A L
Sbjct: 132 YECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLG 191
Query: 121 AME-KLGAKPDDVTFITVLS 139
ME K D TF +L+
Sbjct: 192 LMEMKAAVTMDAGTFAPLLT 211
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 102/263 (38%), Gaps = 44/263 (16%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I G+VQ A L G M+++ V D LLT + +H V++
Sbjct: 173 LIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 232
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALEL 118
+ + + A+I YA G V + VF+GL KD SW S+I G + + A EL
Sbjct: 233 GLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFEL 292
Query: 119 FEAMEKLGAKPDDVTFITVLSACS------------------------------------ 142
F M++ + D T+ +LSACS
Sbjct: 293 FIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQ 352
Query: 143 -HAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEII 201
G +E+ LF S+ SK +L + I + GL +A + L ++
Sbjct: 353 FPTGTMEDALSLFESLKSK-----DLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVD 407
Query: 202 VPLYGALLSACRTYGNIDMGERL 224
+ ALL +C + +G+++
Sbjct: 408 DYAFSALLRSCSDLATLQLGQQI 430
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 102/289 (35%), Positives = 155/289 (53%), Gaps = 6/289 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y + N + +I LF M +G+ PD + ++L + + +L G+ +H Y +
Sbjct: 548 MISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG 607
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I DT + ALI+MY K G + + +F ++ K +W +I G +G AL LF+
Sbjct: 608 IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFD 667
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+K G PDDVTF++++SAC+H+G VEEG+ +F M Y I+PN+EHY +DLLGRA
Sbjct: 668 EMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRA 727
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL EA + +P + D I + LLSA RT+ N+++G A L
Sbjct: 728 GLLEEAYSFIKAMPIEADSSI---WLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 784
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGN---SGG 286
+Y A + K+ MK+ G+ K PG S I++ N SGG
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGG 833
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVR--GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
+I+G + +F EA+ +FGDM+ +KPD I+ ++ CA AL G +H +I+
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
++++ VG++LI++Y+K G E +L+VF + ++ +W S+I + N +++L
Sbjct: 505 TGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDL 564
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M G PD V+ +VL A S + +G+ L H + + I + ID+
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL-HGYTLRLGIPSDTHLKNALIDMYV 623
Query: 179 RAGLLHEAEELVMKLPDQT 197
+ G AE + K+ ++
Sbjct: 624 KCGFSKYAENIFKKMQHKS 642
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 3/184 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ Y + + A+ LFG M+ + V PD F + +++ C+ G +G+ +H + +
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I + + +AL+ +Y+K GC + VF ++EKD +W S+I GL NGK +AL++F
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 121 AM--EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
M + KPD +V +AC+ + G ++ SM K + N+ IDL
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDLYS 522
Query: 179 RAGL 182
+ GL
Sbjct: 523 KCGL 526
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 4/223 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGAL--EHGRWIHDYVIE 58
MI+GY +F RF E + F M V GV+PD F + +++ + G E G+ IH +++
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALE 117
N + D+ + TALI+MY K G + VF +++K + W +I G +G +L+
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
L+ + K +F L ACS + GR++ H K + + + +
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQI-HCDVVKMGLHNDPYVCTSLLSMY 317
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDM 220
+ G++ EAE + + D+ EI + A Y +D+
Sbjct: 318 SKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 5/174 (2%)
Query: 37 LTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDT 96
L C+QS GR IH V++ + D V T+L+ MY+K G V ++ VF+ + +K
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 97 ASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHS 156
W +++ A N AL+LF M + PD T V+S CS GL G+ + H+
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSV-HA 397
Query: 157 MSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
K I+ + L + G +A LV K ++ D + +G+L+S
Sbjct: 398 ELFKRPIQSTSTIESALLTLYSKCGCDPDA-YLVFKSMEEKDMVA---WGSLIS 447
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 8/179 (4%)
Query: 31 FIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNG 90
F +LL C+ L +G+ IH V+ D + T+L+ MY K G ++ +++VF+G
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 91 LKE-------KDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSA-CS 142
+ +D W S+I G + + + F M G +PD + V+S C
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 143 HAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEII 201
E K H + + + ID+ + GL +A + +++ D+++ ++
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/297 (32%), Positives = 163/297 (54%), Gaps = 4/297 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G Q + + L+ M++ G +P+K V +L+ C+ G+ IH I+
Sbjct: 163 LIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG 222
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V ++LI MY+K GC+ + + F+ +++D W+S+I +G+ ++A+ELF
Sbjct: 223 ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFN 282
Query: 121 AM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M E+ + ++V F+ +L ACSH+GL ++G +LF M KY KP L+HY C +DLLGR
Sbjct: 283 TMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGR 342
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG L +AE ++ +P +TD +I + LLSAC + N +M +R+ +
Sbjct: 343 AGCLDQAEAIIRSMPIKTDIVI---WKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACY 399
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
++ASA RW DV++VR M+D +KK G S + +G + +G S S +K
Sbjct: 400 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSK 456
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 121/228 (53%), Gaps = 5/228 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G +QF +E ++LF +M G PD++ + ++ +G A ++ G+ IH Y I+
Sbjct: 62 MIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG 121
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +D VV ++L MY ++G ++ V + ++ +W ++I G A NG L L++
Sbjct: 122 LELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYK 181
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G +P+ +TF+TVLS+CS + +G+++ H+ + K + I + +
Sbjct: 182 MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQI-HAEAIKIGASSVVAVVSSLISMYSKC 240
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
G L +A + + D+ DE+ ++ +++SA +G D L T+
Sbjct: 241 GCLGDAAKAFSEREDE-DEV---MWSSMISAYGFHGQGDEAIELFNTM 284
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
LI Y ++G + + +VF+ + ++ +W ++I GL + L LF M LG PD
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELV 190
+ T +V S + V G+++ H + KY ++ +L + R G L + E ++
Sbjct: 91 EYTLGSVFSGSAGLRSVSIGQQI-HGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVI 149
Query: 191 MKLP 194
+P
Sbjct: 150 RSMP 153
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 153/279 (54%), Gaps = 3/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ +G + F A+ +F MQ GV P+ + LL L G+ +H + +
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ D V TAL++MY KSG ++ ++E+F G+K K ASW ++ G AM G+ + + F
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G +PD +TF +VLS C ++GLV+EG K F M S+Y I P +EH C +DLLGR+
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA + + + + D I +GA LS+C+ + ++++ E L
Sbjct: 547 GYLDEAWDFIQTMSLKPDATI---WGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYM 603
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
+Y++ +RWEDV ++R+ M++ ++ +S I ++
Sbjct: 604 MMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQID 642
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 36/224 (16%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++GY +AIA+ MQ+ G+KP + +LL A+ G L+ G+ IH Y++ N+
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGL-------------- 106
+ D V T LI+MY K+G + + VF+ + K+ +W S++ GL
Sbjct: 256 LWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMI 315
Query: 107 ---------------------AMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAG 145
A GK KAL++ M++ G P+ V++ + S CS G
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNG 375
Query: 146 LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
K+F M + + PN + +LG LLH +E+
Sbjct: 376 NFRNALKVFIKMQEE-GVGPNAATMSTLLKILGCLSLLHSGKEV 418
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 89/173 (51%), Gaps = 1/173 (0%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
+++A+ LF +MQ G K +V LL C+ GR IH YV+ + + + +
Sbjct: 70 WEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNS 129
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
LI MY+++G +E S +VFN +K+++ +SW SI+ G + A+ L + ME G KPD
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPD 189
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLL 183
VT+ ++LS + GL ++ + M +KP+ + + G L
Sbjct: 190 IVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHL 241
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKAL 116
I D + +L YA G EK+L+V +KEK A SWT+I G + NG AL
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 381
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++F M++ G P+ T T+L L+ G+++ H + ++ + +D+
Sbjct: 382 KVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV-HGFCLRKNLICDAYVATALVDM 440
Query: 177 LGRAGLLHEAEELVMKLPDQT 197
G++G L A E+ + +++
Sbjct: 441 YGKSGDLQSAIEIFWGIKNKS 461
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 123
DT V +A + Y + + + ++F+ + ++D +W I+ +G KA+ELF M+
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQ 81
Query: 124 KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLL 183
GAK D T + +L CS+ EGR++ H + ++ N+ I + R G L
Sbjct: 82 FSGAKAYDSTMVKLLQVCSNKEGFAEGRQI-HGYVLRLGLESNVSMCNSLIVMYSRNGKL 140
Query: 184 HEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
+ ++ + D+ + + ++LS+ G +D
Sbjct: 141 ELSRKVFNSMKDRN----LSSWNSILSSYTKLGYVD 172
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 151/281 (53%), Gaps = 5/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q +EA+ +F + G+ P+ +LLT + L+HG+ H +V+
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V+ +LI+MY+K G + + +F+ + E+ SW +++ G + +G + LELF
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 121 AM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSM-SSKYHIKPNLEHYGCFIDLLG 178
M ++ KPD VT + VLS CSH + + G +F M + +Y KP EHYGC +D+LG
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG + EA E + ++P + ++ G+LL ACR + ++D+GE + L
Sbjct: 405 RAGRIDEAFEFIKRMPSKPTAGVL---GSLLGACRVHLSVDIGESVGRRLIEIEPENAGN 461
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
+YASA RW DVN VR+ M + K PG S I E
Sbjct: 462 YVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHE 502
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 107/198 (54%), Gaps = 3/198 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y Q EA+ +F +M KP++F +LT C ++ L G+ IH +++
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
VG++L++MYAK+G ++++ E+F L E+D S T+II G A G +ALE+F
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF-HSMSSKYHIKPNLEHYGCFIDLLGR 179
+ G P+ VT+ ++L+A S L++ G++ H + + L++ ID+ +
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN--SLIDMYSK 301
Query: 180 AGLLHEAEELVMKLPDQT 197
G L A L +P++T
Sbjct: 302 CGNLSYARRLFDNMPERT 319
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Query: 35 ALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK 94
ALL C AL G+ +H ++I+ R + T + T L+ Y K C+E + +V + + EK
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 95 DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF 154
+ SWT++I + G +++AL +F M + KP++ TF TVL++C A + G+++
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI- 175
Query: 155 HSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
H + K++ ++ +D+ +AG + EA E+ LP++
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER 217
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 175 bits (443), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 147/270 (54%), Gaps = 3/270 (1%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
R E LF MQ + + +L C++ AL G+ IH +++++ D +
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLN 376
Query: 70 ALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKP 129
+L++MY K G VE S VF+ + KD ASW ++ A+NG + + LFE M + G P
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAP 436
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
D +TF+ +LS CS GL E G LF M +++ + P LEHY C +D+LGRAG + EA ++
Sbjct: 437 DGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKV 496
Query: 190 VMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASA 249
+ +P + I +G+LL++CR +GN+ +GE A L IYA A
Sbjct: 497 IETMPFKPSASI---WGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADA 553
Query: 250 DRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
W++V+K+R MK G+KK G S + ++
Sbjct: 554 KMWDNVDKIREMMKQRGVKKEAGCSWVQVK 583
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 90/181 (49%), Gaps = 1/181 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M GY + +A+ ++ DM ++P F + L C L GR IH +++ +
Sbjct: 207 MAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRK 266
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
VD VV L+++Y +SG + + +VF+G+ E++ +W S+I L+ + ++ LF
Sbjct: 267 EKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFR 326
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ T T+L ACS + G+++ H+ K KP++ +D+ G+
Sbjct: 327 KMQEEMIGFSWATLTTILPACSRVAALLTGKEI-HAQILKSKEKPDVPLLNSLMDMYGKC 385
Query: 181 G 181
G
Sbjct: 386 G 386
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYV-IEN 59
M+N Y +E I LF M GV PD VALL+GC+ +G E+G + + + E
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEF 468
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTAS-WTSIICGLAMNGKTN----K 114
R+ L+++ ++G ++++++V + K +AS W S++ ++G +
Sbjct: 469 RVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIA 528
Query: 115 ALELF 119
A ELF
Sbjct: 529 AKELF 533
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 174 bits (442), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 152/278 (54%), Gaps = 7/278 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G R DEAI++F M+ P+ V++LL C+ S L +W H I
Sbjct: 400 MISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRS 456
Query: 61 IMV-DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ + D VGT++++ YAK G +E + F+ + EK+ SWT II A+NG +KAL LF
Sbjct: 457 LAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALF 516
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M++ G P+ VT++ LSAC+H GLV++G +F SM + H KP+L+HY C +D+L R
Sbjct: 517 DEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSR 575
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRT-YGNIDMGERLATTLXXXXXXXXXX 238
AG + A EL+ LP+ + +GA+LS CR + + + + +
Sbjct: 576 AGEIDTAVELIKNLPEDV-KAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSG 634
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
+A+ WEDV +R +K+ ++ V GYS +
Sbjct: 635 YLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I YVQ + LF +M +PD V ++L C ++ GR +H + I
Sbjct: 196 VIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRR 255
Query: 60 RI-MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ D V +LI+MY+K V+ + VF+ ++ SW SI+ G N + ++ALE+
Sbjct: 256 GFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEM 315
Query: 119 FEAMEKLGAKPDDVTFITVLSAC 141
F M + + D+VT +++L C
Sbjct: 316 FHLMVQEAVEVDEVTVVSLLRVC 338
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 9/212 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ G+V R+DEA+ +F M V+ D+ VV+LL C + IH +I
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V ++LI+ Y V+ + V + + KD S +++I GLA G++++A+ +F
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC-FIDLLGR 179
M P+ +T I++L+ACS + + K H ++ + + N G +D +
Sbjct: 419 HMRD---TPNAITVISLLNACSVSADLRTS-KWAHGIAIRRSLAINDISVGTSIVDAYAK 474
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSA 211
G A E+ + DQ E + + ++SA
Sbjct: 475 CG----AIEMARRTFDQITEKNIISWTVIISA 502
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ G + + +E + F ++V G +P+ +V ++ C G IH YVI +
Sbjct: 98 IVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC--RSLWFDGEKIHGYVIRSG 155
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +++ MYA S + + ++F+ + E+D SW+ +I + + L+LF+
Sbjct: 156 FCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFK 214
Query: 121 AM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M + +PD VT +VL AC+ ++ GR +
Sbjct: 215 EMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSV 248
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 147/279 (52%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y+ N +I+LF +M G + ++ +V LL C +S L+ GR +H +I
Sbjct: 221 MISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF 280
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V+ TALI+MY K V + +F+ L ++ +W +I ++G+ LELFE
Sbjct: 281 LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFE 340
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
AM +PD+VTF+ VL C+ AGLV +G+ + M ++ IKPN H C +L A
Sbjct: 341 AMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSA 400
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G EAEE + LPD+ + LLS+ R GN +GE +A +L
Sbjct: 401 GFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYH 460
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
IY+ RWEDVN+VR +K+ I ++PG +DL+
Sbjct: 461 LLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLK 499
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 81/188 (43%), Gaps = 31/188 (16%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ Y+ + +A+ + D+ G PD + V+L++ ++ ++ G+ H I++
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKA----- 115
V +L+ MY G ++ + ++F + ++D SW SII G+ NG A
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 116 --------------------------LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
+ LF M + G + ++ T + +L+AC + ++E
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 150 GRKLFHSM 157
GR + S+
Sbjct: 269 GRSVHASL 276
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 157/280 (56%), Gaps = 5/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + E + L M+ G++ + ++A+++ C S L +H +++
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCG 383
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
M ++G ALI+MYAK G + + EVF L EKD SW+S+I ++G ++ALE+F+
Sbjct: 384 FMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFK 443
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M K G + DD+ F+ +LSAC+HAGLVEE + +F + + KYH+ LEHY C+I+LLGR
Sbjct: 444 GMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRF 502
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDM-GERLATTLXXXXXXXXXXX 239
G + +A E+ + +P + I + +LLSAC T+G +D+ G+ +A L
Sbjct: 503 GKIDDAFEVTINMPMKPSARI---WSSLLSACETHGRLDVAGKIIANELMKSEPDNPANY 559
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
I+ + + +VR M+ + K G+S I+ E
Sbjct: 560 VLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIEPE 599
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 8/200 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHG----RWIHDYV 56
MI+G V ++ + LF MQ ++P++ ++++L C + L +G + IH +
Sbjct: 222 MISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVE---LNYGSSLVKEIHGFS 278
Query: 57 IENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKAL 116
+ D + A + MY + G V S +F K +D W+S+I G A G ++ +
Sbjct: 279 FRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVM 338
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
L M K G + + VT + ++SAC+++ L+ + HS K ++ ID+
Sbjct: 339 NLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTV-HSQILKCGFMSHILLGNALIDM 397
Query: 177 LGRAGLLHEAEELVMKLPDQ 196
+ G L A E+ +L ++
Sbjct: 398 YAKCGSLSAAREVFYELTEK 417
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 2/183 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEH-GRWIHDYV-IE 58
+IN Q EA+ L +M G P +V +LL C + G+ R H V ++
Sbjct: 119 IINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVD 178
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
R+ ++ TAL++MY K + VF+ ++ K+ SWT++I G N ++L
Sbjct: 179 ERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDL 238
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F AM++ +P+ VT ++VL AC K H S ++ + F+ +
Sbjct: 239 FRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYC 298
Query: 179 RAG 181
R G
Sbjct: 299 RCG 301
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGVKPDKF--IVVALLTGCA-QSGALEHGRWIHDYVIE 58
+ G V +DEA+ L+ +++ + + F I+ +++ CA Q G +H ++
Sbjct: 17 LKGLVSDQFYDEALRLY-KLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
DTVV +LI MYAK +VF+ + +DT S+ SII +G +A++L
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKL 135
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSM 157
+ M G P ++L+ C+ G + ++FH++
Sbjct: 136 IKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHAL 174
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 151/267 (56%), Gaps = 3/267 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
E + + +VR + PD + + LL+ C + +L G H YV+ + +T++G ALI
Sbjct: 473 ERFSCLLESEVR-ILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLG-AKPDD 131
MY++ G ++ SLEVFN + EKD SW S+I + +G+ A+ ++ M+ G PD
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDA 591
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
TF VLSACSHAGLVEEG ++F+SM + + N++H+ C +DLLGRAG L EAE LV
Sbjct: 592 ATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLV- 650
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADR 251
K+ ++T V ++ AL SAC +G++ +G+ +A L IYA A
Sbjct: 651 KISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGM 710
Query: 252 WEDVNKVRSKMKDLGIKKVPGYSSIDL 278
W++ + R + +G K G S + L
Sbjct: 711 WKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G + + ++ LF +M GV+ DKF +L+ C G+L+ G+ +H VI+
Sbjct: 161 MITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAG 219
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVF--NGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ + V ALI MY V + VF + +D ++ +I GLA K +++L +
Sbjct: 220 FFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA-GFKRDESLLV 278
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGL 146
F M + +P D+TF++V+ +CS A +
Sbjct: 279 FRKMLEASLRPTDLTFVSVMGSCSCAAM 306
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 52/262 (19%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y Q A++++ M + GVKPD+F +LL A S L+ + +I+
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFG 416
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + ALI Y+K+G +EK+ +F K+ SW +II G NG + LE F
Sbjct: 417 LSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFS 476
Query: 121 AM--EKLGAKPDDVTFITVLSAC-----------------------------------SH 143
+ ++ PD T T+LS C S
Sbjct: 477 CLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQ 536
Query: 144 AGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDE-IIV 202
G ++ ++F+ MS K ++ + I R G E E V DE ++
Sbjct: 537 CGTIQNSLEVFNQMSEK-----DVVSWNSLISAYSRHG---EGENAVNTYKTMQDEGKVI 588
Query: 203 P---LYGALLSACRTYGNIDMG 221
P + A+LSAC G ++ G
Sbjct: 589 PDAATFSAVLSACSHAGLVEEG 610
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 8/189 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G F R DE++ +F M ++P V+++ C+ + G +H I+
Sbjct: 263 VIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM---GHQVHGLAIKTG 318
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
T+V A + MY+ + +VF L+EKD +W ++I A+ +++
Sbjct: 319 YEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYK 378
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +G KPD+ TF ++L+ ++E + + K+ + +E I +
Sbjct: 379 RMHIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKFGLSSKIEISNALISAYSKN 434
Query: 181 GLLHEAEEL 189
G + +A+ L
Sbjct: 435 GQIEKADLL 443
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 33/166 (19%)
Query: 14 AIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
A+ LF D+ + ++PD++ V +T G +H Y I + ++ + V L+
Sbjct: 40 ALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLL 99
Query: 73 EMYA-------------------------------KSGCVEKSLEVFNGLKEKD-TASWT 100
+Y K G +E + EVF+ + E+D A W
Sbjct: 100 SLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWN 159
Query: 101 SIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGL 146
++I G +G ++ELF M KLG + D F T+LS C + L
Sbjct: 160 AMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSL 205
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 162/294 (55%), Gaps = 3/294 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++G+ Q +EA+ +F M G+ + F + + +++ ++ G+ +H + +
Sbjct: 663 LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG 722
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+T V ALI MYAK G + + + F + K+ SW +II + +G ++AL+ F+
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFD 782
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +P+ VT + VLSACSH GLV++G F SM+S+Y + P EHY C +D+L RA
Sbjct: 783 QMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRA 842
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL A+E + ++P + D ++ + LLSAC + N+++GE A L
Sbjct: 843 GLLSRAKEFIQEMPIKPDALV---WRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYV 899
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSL 294
+YA + +W+ + R KMK+ G+KK PG S I+++ +S VG +H L
Sbjct: 900 LLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 32/259 (12%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G + EAI LF DM V G+ P + ++L+ C + +LE G +H V++
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
DT V AL+ +Y G + + +F+ + ++D ++ ++I GL+ G KA+ELF+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G +PD T +++ ACS G + G++L H+ ++K N + G ++L +
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQL-HAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 181 ----------------------------GLLHEAEELVMKLPDQTDEIIVP---LYGALL 209
GLL + E IVP Y ++L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 210 SACRTYGNIDMGERLATTL 228
C G++++GE++ + +
Sbjct: 498 KTCIRLGDLELGEQIHSQI 516
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 106/224 (47%), Gaps = 5/224 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ Y + + +F MQ+ + P+++ ++L C + G LE G IH +I+
Sbjct: 461 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTN 520
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ V + LI+MYAK G ++ + ++ KD SWT++I G +KAL F
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 580
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G + D+V +SAC+ ++EG+++ H+ + +L + L R
Sbjct: 581 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRC 639
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
G + E+ L + + D I + AL+S + GN + R+
Sbjct: 640 GKIEES-YLAFEQTEAGDNIA---WNALVSGFQQSGNNEEALRV 679
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 99/198 (50%), Gaps = 1/198 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY Q+N D+A+ F M RG++ D+ + ++ CA AL+ G+ IH +
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D AL+ +Y++ G +E+S F + D +W +++ G +G +AL +F
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G ++ TF + + A S +++G+++ H++ +K E I + +
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSETEVCNALISMYAKC 740
Query: 181 GLLHEAEELVMKLPDQTD 198
G + +AE+ +++ + +
Sbjct: 741 GSISDAEKQFLEVSTKNE 758
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 109/255 (42%), Gaps = 31/255 (12%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGC-AQSGALEHGRWIHDYVIEN 59
MI N E LF M V P++ +L C S A + IH ++
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQ 216
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ TVV LI++Y+++G V+ + VF+GL+ KD +SW ++I GL+ N +A+ LF
Sbjct: 217 GLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLF 276
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL-----------------------FH- 155
M LG P F +VLSAC +E G +L FH
Sbjct: 277 CDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHL 336
Query: 156 -SMSSKYHIKPNLEH-----YGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
++ S HI N+ Y I+ L + G +A EL ++ E +L+
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLV 396
Query: 210 SACRTYGNIDMGERL 224
AC G + G++L
Sbjct: 397 VACSADGTLFRGQQL 411
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 91/193 (47%), Gaps = 1/193 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING Q ++A+ LF M + G++PD + +L+ C+ G L G+ +H Y +
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + AL+ +YAK +E +L+ F + ++ W ++ + + +F
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ P+ T+ ++L C G +E G ++ HS K + + N ID+ +
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQI-HSQIIKTNFQLNAYVCSVLIDMYAKL 538
Query: 181 GLLHEAEELVMKL 193
G L A +++++
Sbjct: 539 GKLDTAWDILIRF 551
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 100/233 (42%), Gaps = 32/233 (13%)
Query: 24 RGVKPDKFIVVALLTGCAQS-GALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVE 82
RG++P+ + LL GC ++ G+L+ GR +H +++ + + + L + Y G +
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 83 KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACS 142
+ +VF+ + E+ +W +I LA + LF M P++ TF VL AC
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR 197
Query: 143 HAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELV--MKLPDQTDEI 200
+ + + H+ ++ + IDL R G + A + ++L D + +
Sbjct: 198 GGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWV 257
Query: 201 --------------------------IVPL---YGALLSACRTYGNIDMGERL 224
I+P + ++LSAC+ ++++GE+L
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQL 310
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 160/286 (55%), Gaps = 13/286 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGV-KPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GYV+ +++A+ +F M G K ++ +V+++ CA GAL G+ +H Y+++
Sbjct: 211 MIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV 270
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVF--NGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ + ++ T+LI+MYAK G + + VF +KE D W +II GLA +G ++L+
Sbjct: 271 HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQ 330
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
LF M + PD++TF+ +L+ACSH GLV+E F S+ +P EHY C +D+L
Sbjct: 331 LFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVL 389
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVP---LYGALLSACRTYGNIDMGERLATTLXXXXXX 234
RAGL+ +A + + ++P I P + GALL+ C +GN+++ E + L
Sbjct: 390 SRAGLVKDAHDFISEMP------IKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPH 443
Query: 235 XXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+YA ++ +R M+ G+KK+ G+S +DL+G
Sbjct: 444 NDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDG 489
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 86/157 (54%), Gaps = 6/157 (3%)
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 123
+ V ++++ YAKSG V + VF+ + E+D +W+S+I G G+ NKALE+F+ M
Sbjct: 173 NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMM 232
Query: 124 KLG-AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGL 182
++G +K ++VT ++V+ AC+H G + G K H H+ + ID+ + G
Sbjct: 233 RMGSSKANEVTMVSVICACAHLGALNRG-KTVHRYILDVHLPLTVILQTSLIDMYAKCGS 291
Query: 183 LHEAEELVMKLP-DQTDEIIVPLYGALLSACRTYGNI 218
+ +A + + +TD + ++ A++ ++G I
Sbjct: 292 IGDAWSVFYRASVKETDAL---MWNAIIGGLASHGFI 325
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/298 (32%), Positives = 160/298 (53%), Gaps = 9/298 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I YVQ + A+ LF ++ + PD + ++L A+S +L GR IH Y++++R
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+T++ +L+ MYA G +E + + FN + KD SW SII A++G ++ LF
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFS 521
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M P+ TF ++L+ACS +G+V+EG + F SM +Y I P +EHYGC +DL+GR
Sbjct: 522 EMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRT 581
Query: 181 GLLHEAEELVMKLPDQTDEIIVP---LYGALLSACRTYGNIDMGERLATTLXXXXXXXXX 237
G A+ + ++P VP ++G+LL+A R + +I + E A +
Sbjct: 582 GNFSAAKRFLEEMP------FVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTG 635
Query: 238 XXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLT 295
+YA A RWEDVN+++ M+ GI + S+++ +G + G SH T
Sbjct: 636 CYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVAT 693
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 116/226 (51%), Gaps = 7/226 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY+ ++ LF +M G KPD+F ++ L C+ + + G+ IH + + +R
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 61 IMV-DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I D +V T++++MY+K G V + +FNG+ +++ +W +I A NG+ A F
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 120 EAM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+ M E+ G +PD +T I +L A + + EGR + H + + P++ ID+ G
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASA----ILEGRTI-HGYAMRRGFLPHMVLETALIDMYG 376
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
G L AE + ++ ++ + A + + Y +++ + L
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 83/161 (51%), Gaps = 1/161 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G+ + EA+ + M GVK D F ++ A +LE G+ IH VI+
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG 160
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D V +LI +Y K GC + +VF + E+D SW S+I G G +L LF+
Sbjct: 161 FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF-HSMSSK 160
M K G KPD + ++ L ACSH + G+++ H++ S+
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 5/154 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI Y + R +A F M + G++PD + LL + A+ GR IH Y +
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLP----ASAILEGRTIHGYAMRR 359
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ V+ TALI+MY + G ++ + +F+ + EK+ SW SII NGK ALELF
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 419
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+ + PD T ++L A + + + EGR++
Sbjct: 420 QELWDSSLVPDSTTIASILPAYAESLSLSEGREI 453
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 69 TALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAK 128
T + +A S +E +L++F+ + + D W +I G G +A++ + M G K
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 129 PDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEE 188
D T+ V+ + + +EEG+K+ H+M K ++ I L + G +AE+
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKI-HAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEK 186
Query: 189 LVMKLPDQ 196
+ ++P++
Sbjct: 187 VFEEMPER 194
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 158/279 (56%), Gaps = 6/279 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG--VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
MI Y Q + +A+ LF M R ++PD+ + ++++ +Q G G W+ Y+ E
Sbjct: 300 MIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITE 359
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ I +D ++ T+LI++Y K G K+ ++F+ L +KDT S++++I G +NG +A L
Sbjct: 360 HGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSL 419
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F AM + P+ VTF +LSA SH+GLV+EG K F+SM ++++P+ +HYG +D+LG
Sbjct: 420 FTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKD-HNLEPSADHYGIMVDMLG 478
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG L EA EL+ +P Q + ++GALL A + N++ GE +
Sbjct: 479 RAGRLEEAYELIKSMPMQPN---AGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGY 535
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
IY+S RW+D VR +K+ + K G S ++
Sbjct: 536 LSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Query: 7 QFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTV 66
Q +F E + ++ DM G+ P V ++L C + + G+ IH ++N +
Sbjct: 81 QHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVY 140
Query: 67 VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLG 126
V T L+ +Y++ G +E + + F+ + EK+T SW S++ G +G+ ++A +F+ +
Sbjct: 141 VQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI---- 196
Query: 127 AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
+ D V++ ++S+ + G + LF +M K
Sbjct: 197 PEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLK 230
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 35 ALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK 94
+LL G +SG L+ R + D + E D V +I YAK G + + +F+ + K
Sbjct: 175 SLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGDMGNACSLFSAMPLK 230
Query: 95 DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF 154
ASW +I G + A F+AM + + V++IT++S + G V+ +LF
Sbjct: 231 SPASWNILIGGYVNCREMKLARTYFDAM----PQKNGVSWITMISGYTKLGDVQSAEELF 286
Query: 155 HSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPD-----QTDEIIVPLYGALL 209
MS K + Y I + G +A +L ++ + Q DEI + +++
Sbjct: 287 RLMSKKDKLV-----YDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITL---SSVV 338
Query: 210 SACRTYGNIDMG 221
SA GN G
Sbjct: 339 SANSQLGNTSFG 350
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 144/272 (52%), Gaps = 7/272 (2%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE----NRIMVDTVV 67
D +ALF M G++PD + +L C + +L GR IH Y+I NR + +
Sbjct: 345 DGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFI 404
Query: 68 GTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGA 127
+L++MY K G + + VF+ ++ KD+ASW +I G + AL++F M + G
Sbjct: 405 HNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGV 464
Query: 128 KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAE 187
KPD++TF+ +L ACSH+G + EGR M + Y+I P +HY C ID+LGRA L EA
Sbjct: 465 KPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAY 524
Query: 188 ELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYA 247
EL + P + ++ + ++LS+CR +GN D+ L +Y
Sbjct: 525 ELAISKPICDNPVV---WRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYV 581
Query: 248 SADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
A ++E+V VR M+ +KK PG S I L+
Sbjct: 582 EAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLK 613
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 85/153 (55%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY Q RF++A+ +F M+ GV + + ++L+ SG +++GR IH ++
Sbjct: 233 LVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTG 292
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D VV ALI+MY KS +E++ +F + E+D +W S++C G + L LFE
Sbjct: 293 SGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFE 352
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M G +PD VT TVL C + +GR++
Sbjct: 353 RMLCSGIRPDIVTLTTVLPTCGRLASLRQGREI 385
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 3/190 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+V +A+ + +M+ G+ PDK+ +LL G + + L + +H +
Sbjct: 132 LISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLG 190
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD-TASWTSIICGLAMNGKTNKALELF 119
D VG+ L+ Y+K VE + +VF+ L ++D + W +++ G + + AL +F
Sbjct: 191 FDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVF 250
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M + G T +VLSA + +G ++ GR + H ++ K ++ ID+ G+
Sbjct: 251 SKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSI-HGLAVKTGSGSDIVVSNALIDMYGK 309
Query: 180 AGLLHEAEEL 189
+ L EA +
Sbjct: 310 SKWLEEANSI 319
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Query: 34 VALLTGCAQSGALEHGRWIHDYVIENRIMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLK 92
+A L CAQ G+ IH +++ + D+ GT+L+ MYAK G + +++ VF G
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-S 122
Query: 93 EKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRK 152
E+D + ++I G +NG A+E + M G PD TF ++L S A + + +K
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKK 181
Query: 153 LFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
+ H ++ K + + + + +A+++ +LPD+ D + L+ AL++
Sbjct: 182 V-HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSV---LWNALVN 235
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 158/285 (55%), Gaps = 9/285 (3%)
Query: 1 MINGYVQFNRFD-EAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
MI+G+ + N D +A+ LF M Q + P++ +L+ C++ +L HGR H V++
Sbjct: 489 MISGF-RHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVK 547
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ + D+ V TAL +MY K G ++ + + F+ + K+T W +I G NG+ ++A+ L
Sbjct: 548 SGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGL 607
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+ M G KPD +TF++VL+ACSH+GLVE G ++ SM + I+P L+HY C +D LG
Sbjct: 608 YRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLG 667
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG L +AE+L P ++ + L+ LLS+CR +G++ + R+A L
Sbjct: 668 RAGRLEDAEKLAEATPYKSSSV---LWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAA 724
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGN 283
Y+S +W+D ++ M + K PG S YGN
Sbjct: 725 YVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS---WTTYGN 766
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 90/162 (55%), Gaps = 3/162 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++GY + ++EAI+ F MQ + +KPDK + +L+ CA+ LE G+ IH VI
Sbjct: 387 MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTE 446
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNG-LKEKDTASWTSIICGLAMNGKTNKALELF 119
I ++ + + LI +Y++ +E S +F+ + E D A W S+I G N KAL LF
Sbjct: 447 ISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILF 506
Query: 120 EAMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
M + P++ +F TVLS+CS + GR+ FH + K
Sbjct: 507 RRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQ-FHGLVVK 547
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 9/166 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLT------GCAQSGAL---EHGRW 51
+I G + N+ EA+ +F M +GV+ D + +L+ GC + E G+
Sbjct: 211 VIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQ 270
Query: 52 IHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGK 111
IH + D + +L+E+YAK+ + + +F + E + SW +I G +
Sbjct: 271 IHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYR 330
Query: 112 TNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSM 157
++K++E M G +P++VT I+VL AC +G VE GR++F S+
Sbjct: 331 SDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ V+ ++A+ ++ M G P +F + ++L+ C++ G H ++
Sbjct: 109 MISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTG 168
Query: 61 IMVDTVVGTALIEMYAKSG-CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ + VG AL+ MYAK G V+ + VF L + + S+T++I GLA K +A+++F
Sbjct: 169 LDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMF 228
Query: 120 EAMEKLGAKPDDVTFITVLS 139
M + G + D V +LS
Sbjct: 229 RLMCEKGVQVDSVCLSNILS 248
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 25 GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKS 84
G+K D ++ LL + G ++ R + D + + D A + K G + ++
Sbjct: 36 GMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS----VRDVYSWNAFLTFRCKVGDLGEA 91
Query: 85 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACS 142
EVF+G+ E+D SW ++I L G KAL +++ M G P T +VLSACS
Sbjct: 92 CEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACS 149
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 157/279 (56%), Gaps = 5/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ G+ Q EAI+LF M ++ ++ +A++ C+ G+LE G+W+H +I +
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG 535
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D TALI+MYAK G + + VF + + SW+S+I M+G+ A+ F
Sbjct: 536 LK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFN 594
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + G KP++V F+ VLSAC H+G VEEG+ F+ M S + + PN EH+ CFIDLL R+
Sbjct: 595 QMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRS 653
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA + ++P D ++G+L++ CR + +D+ + + L
Sbjct: 654 GDLKEAYRTIKEMPFLAD---ASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYT 710
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
IYA WE+ ++RS MK +KKVPGYS+I+++
Sbjct: 711 LLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEID 749
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ Y +A+ LF M + +KPD F + + ++ C +G + G+ IH +VI
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD 435
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D V +LI+MY+KSG V+ + VFN +K + +W S++CG + NG + +A+ LF+
Sbjct: 436 VS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFD 494
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSM 157
M + ++VTF+ V+ ACS G +E+G+ + H +
Sbjct: 495 YMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKL 531
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 96/186 (51%), Gaps = 2/186 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
+A+ +F M GV+PD +++++ GCA+ G L R +H + +D + +L+
Sbjct: 185 KALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLL 244
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
MY+K G + S +F + +K+ SWT++I + KAL F M K G +P+ V
Sbjct: 245 TMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLV 304
Query: 133 TFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYG-CFIDLLGRAGLLHEAEELVM 191
T +VLS+C GL+ EG+ + H + + + PN E ++L G L + E ++
Sbjct: 305 TLYSVLSSCGLIGLIREGKSV-HGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 192 KLPDQT 197
+ D+
Sbjct: 364 VVSDRN 369
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEH---GRWIHDYVI 57
+I V + D AI L+ + + KF+ ++L CA G+ EH G +H +I
Sbjct: 71 LIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACA--GSREHLSVGGKVHGRII 128
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ + D V+ T+L+ MY ++G + + +VF+G+ +D +W++++ NG+ KAL
Sbjct: 129 KGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALR 188
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC--FID 175
+F+ M G +PD VT I+V+ C+ G + R + ++ K +L+ C +
Sbjct: 189 MFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMF---DLDETLCNSLLT 245
Query: 176 LLGRAGLLHEAEELVMKLPDQT 197
+ + G L +E + K+ +
Sbjct: 246 MYSKCGDLLSSERIFEKIAKKN 267
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y + ++A+ F +M G++P+ + ++L+ C G + G+ +H + +
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333
Query: 61 IMVD-TVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ + + AL+E+YA+ G + V + +++ +W S+I A G +AL LF
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLF 393
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M KPD T + +SAC +AGLV G+++
Sbjct: 394 RQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/283 (33%), Positives = 158/283 (55%), Gaps = 12/283 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYV-IE 58
+I+GY + ++ EAI LF M +KP++ ++A+L G L+ +H YV
Sbjct: 226 IIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKR 285
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVF----NGLKEKDTASWTSIICGLAMNGKTNK 114
+ D V +LI+ YAK GC++ + + F NG K+ SWT++I A++G +
Sbjct: 286 GFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNG--RKNLVSWTTMISAFAIHGMGKE 343
Query: 115 ALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEG-RKLFHSMSSKYHIKPNLEHYGCF 173
A+ +F+ ME+LG KP+ VT I+VL+ACSH GL EE + F++M ++Y I P+++HYGC
Sbjct: 344 AVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCL 403
Query: 174 IDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXX 233
+D+L R G L EAE++ +++P + ++ + LL AC Y + ++ ER+ L
Sbjct: 404 VDMLRRKGRLEEAEKIALEIPIEEKAVV---WRMLLGACSVYDDAELAERVTRKLMELER 460
Query: 234 XXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSI 276
I+ R+ D + R +M G+ K+PG+S +
Sbjct: 461 SHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 170 bits (431), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 158/310 (50%), Gaps = 7/310 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY + ++A+ F +M GV D F A+L C+ L HG+ IH +I
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCG 367
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
VG AL+ +YAK G ++++ F + KD SW +++ ++G ++AL+L++
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYD 427
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G KPD+VTFI +L+ CSH+GLVEEG +F SM Y I ++H C ID+ GR
Sbjct: 428 NMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRG 487
Query: 181 GLLHEAEELVMKLPDQ-TDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G L EA++L TD + LL AC T+ + ++G ++ L
Sbjct: 488 GHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSF 547
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH------S 293
+Y S RW++ VR +M + G+KK PG S I++ ++ VG SH S
Sbjct: 548 VLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELS 607
Query: 294 LTKFGLQHGM 303
T LQH M
Sbjct: 608 ETLNCLQHEM 617
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 33/175 (18%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ Y + EAIALF ++ KPD + A+L+ CA G ++ GR I VI +
Sbjct: 41 MLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSG 100
Query: 61 IMVDTVVGTALIEMYAKSG------------CV---------------------EKSLEV 87
V +LI+MY K C E +L+V
Sbjct: 101 FCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDV 160
Query: 88 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACS 142
F + ++ +W +I G A GK L LF+ M + KPD TF ++++ACS
Sbjct: 161 FVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS 215
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 83/187 (44%), Gaps = 33/187 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGC-AQSGALEHGRWIHDYVIEN 59
MI+G+ + + ++LF +M KPD + +L+ C A S + +GR +H +++N
Sbjct: 175 MISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN 234
Query: 60 ------------------------------RIMVDTVVG-TALIEMYAKSGCVEKSLEVF 88
I V T V ++I+ K G EK+LEVF
Sbjct: 235 GWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVF 294
Query: 89 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVE 148
+ EK+ +WT++I G NG +AL F M K G D + VL ACS L+
Sbjct: 295 HLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLG 354
Query: 149 EGRKLFH 155
G K+ H
Sbjct: 355 HG-KMIH 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 69 TALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAK 128
T+ I AKSG + + +VF+G+ E DT +W +++ + G +A+ LF + AK
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 129 PDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
PDD +F +LS C+ G V+ GRK+ S+ + +L ID+ G+
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKC 118
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/255 (36%), Positives = 142/255 (55%), Gaps = 3/255 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G V + ++A F M G+ P+ ++ LL C ++HG+ IH Y +
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG 318
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +AL++MY K G + +++ +F +K T ++ S+I A +G +KA+ELF+
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFD 378
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
ME G K D +TF +L+ACSHAGL + G+ LF M +KY I P LEHY C +DLLGRA
Sbjct: 379 QMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRA 438
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA E++ + + D + +GALL+ACR +GN+++ A L
Sbjct: 439 GKLVEAYEMIKAMRMEPDLFV---WGALLAACRNHGNMELARIAAKHLAELEPENSGNGL 495
Query: 241 XXXXIYASADRWEDV 255
+YA+A WE V
Sbjct: 496 LLTSLYANAGSWESV 510
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 3 NGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIM 62
NGY Q E++ F +M G+K D FIV +LL E G+ IH V++
Sbjct: 95 NGYYQ-----ESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYE 149
Query: 63 VDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 122
D + ++LI+MY+K G V + +VF+ L E+D + ++I G A N + ++AL L + M
Sbjct: 150 SDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDM 209
Query: 123 EKLGAKPDDVTFITVLSACSH 143
+ LG KPD +T+ ++S SH
Sbjct: 210 KLLGIKPDVITWNALISGFSH 230
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 90/201 (44%), Gaps = 40/201 (19%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY ++ DEA+ L DM++ G+KPD AL++G H R N
Sbjct: 189 MISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISG------FSHMR--------NE 234
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V ++ ++ Y + D SWTSII GL N + KA + F+
Sbjct: 235 EKVSEILELMCLDGY-----------------KPDVVSWTSIISGLVHNFQNEKAFDAFK 277
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYG----CFIDL 176
M G P+ T IT+L AC+ ++ G+++ Y + LE +G +D+
Sbjct: 278 QMLTHGLYPNSATIITLLPACTTLAYMKHGKEI-----HGYSVVTGLEDHGFVRSALLDM 332
Query: 177 LGRAGLLHEAEELVMKLPDQT 197
G+ G + EA L K P +T
Sbjct: 333 YGKCGFISEAMILFRKTPKKT 353
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 1/148 (0%)
Query: 49 GRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAM 108
GR +H +++ + I T + L+ Y + G V + +VF+ + ++D + +I A
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 109 NGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLE 168
NG ++L+ F M K G K D ++L A S L E K+ H + K+ + +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLLDREFGKMIHCLVLKFSYESDAF 153
Query: 169 HYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
ID+ + G + A ++ L +Q
Sbjct: 154 IVSSLIDMYSKFGEVGNARKVFSDLGEQ 181
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 153/297 (51%), Gaps = 4/297 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKP-DKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+GY Q ++F+EA+ F ++ + + F ++ C+ G +H I+
Sbjct: 357 IISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKR 416
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
++ +ALI MY+K GC++ + EVF + D +WT+ I G A G ++AL LF
Sbjct: 417 SLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLF 476
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
E M G KP+ VTFI VL+ACSHAGLVE+G+ +M KY++ P ++HY C ID+ R
Sbjct: 477 EKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR 536
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
+GLL EA + + +P + D + + LS C T+ N+++GE L
Sbjct: 537 SGLLDEALKFMKNMPFEPDAMS---WKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGY 593
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
+Y A +WE+ ++ M + +KK S I +G + VG H T+
Sbjct: 594 VLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQ 650
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 10/227 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ GY Q R +A+ LF D+ GV+ D F+ +L CA L G+ IH V +
Sbjct: 256 LMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VGT L++ Y K E + F ++E + SW++II G + +A++ F+
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 121 AMEKLGAKP-DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
++ A + T+ ++ ACS G ++ H+ + K + + I + +
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQV-HADAIKRSLIGSQYGESALITMYSK 434
Query: 180 AGLLHEAEELV--MKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
G L +A E+ M PD + + A +S YGN RL
Sbjct: 435 CGCLDDANEVFESMDNPD------IVAWTAFISGHAYYGNASEALRL 475
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ Y + D+A+ LF M G KP + LL AL+ GR IH +VI
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG 214
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +T + T ++ MY K G + + VF+ + K + T ++ G G+ AL+LF
Sbjct: 215 LCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFV 274
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+ G + D F VL AC+ + G+++
Sbjct: 275 DLVTEGVEWDSFVFSVVLKACASLEELNLGKQI 307
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYV---IENRIMVDTV 66
+ +EA +M GV + L C + +L HGR +HD + IEN +
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENP---SVL 119
Query: 67 VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLG 126
+ +++MY + +E + ++F+ + E + S T++I A G +KA+ LF M G
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 127 AKPDDVTFITVLSACSHAGLVEEGRKL 153
KP + T+L + + ++ GR++
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQI 206
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 159/284 (55%), Gaps = 9/284 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ V+ + + F +M + PD+ +V LL+ C G L G+ +H V+
Sbjct: 185 IMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRE 242
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ ++ +GTAL++MYAKSG +E + VF + +K+ +W+++I GLA G +AL+LF
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 121 AMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M K + +P+ VTF+ VL ACSH GLV++G K FH M + IKP + HYG +D+LGR
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGR 362
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID---MGERLATTLXXXXXXXX 236
AG L+EA + + K+P + D ++ + LLSAC + + D +GE++ L
Sbjct: 363 AGRLNEAYDFIKKMPFEPDAVV---WRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRS 419
Query: 237 XXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+A A W + +VR MK+ +KK+ G S ++L G
Sbjct: 420 GNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGG 463
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 7/214 (3%)
Query: 3 NGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIM 62
GY + E+I ++ +M+ RG+KP+K LL CA L GR I V+++
Sbjct: 86 RGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFD 145
Query: 63 VDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 122
D VG LI +Y + +VF+ + E++ SW SI+ L NGK N E F M
Sbjct: 146 FDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEM 205
Query: 123 EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGL 182
PD+ T + +LSAC G + G KL HS ++ N +D+ ++G
Sbjct: 206 IGKRFCPDETTMVVLLSAC--GGNLSLG-KLVHSQVMVRELELNCRLGTALVDMYAKSGG 262
Query: 183 LHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
L A + ++ D+ V + A++ YG
Sbjct: 263 LEYARLVFERMVDKN----VWTWSAMIVGLAQYG 292
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 147/270 (54%), Gaps = 5/270 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
EA+ +F + +G P+ + +L+ CA AL G+ +H + + + ALI
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 355
Query: 73 EMYAKSGCVEKSLEVFNGL-KEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
+MYAK G + S VF + ++ SWTS++ G +G +A+ELF+ M G +PD
Sbjct: 356 DMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDR 415
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
+ F+ VLSAC HAGLVE+G K F+ M S+Y I P+ + Y C +DLLGRAG + EA ELV
Sbjct: 416 IVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVE 475
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLAT-TLXXXXXXXXXXXXXXXXIYASAD 250
++P + DE +GA+L AC+ + + + RLA + IYA+
Sbjct: 476 RMPFKPDE---STWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEG 532
Query: 251 RWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+W D +VR M+ +G KK G S I +E
Sbjct: 533 KWVDFARVRKMMRMMGNKKEAGMSWILVEN 562
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/198 (18%), Positives = 96/198 (48%), Gaps = 2/198 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G+ + ++ M + + + + + A ++ G+ IH VI+
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRG 243
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +++++Y + G + ++ F+ +++KD +W ++I L +++AL +F+
Sbjct: 244 FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE-RSDSSEALLMFQ 302
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
E G P+ TF ++++AC++ + G++L H + N+E ID+ +
Sbjct: 303 RFESQGFVPNCYTFTSLVAACANIAALNCGQQL-HGRIFRRGFNKNVELANALIDMYAKC 361
Query: 181 GLLHEAEELVMKLPDQTD 198
G + +++ + ++ D+ +
Sbjct: 362 GNIPDSQRVFGEIVDRRN 379
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 161/292 (55%), Gaps = 4/292 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ Y + +EAI +F ++Q RG++P+ ++ LL CAQ +L R H Y+I
Sbjct: 539 MVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG 598
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + GT L+++YAK G ++ + VF +D +T+++ G A++G+ +AL ++
Sbjct: 599 LGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + KPD V T+L+AC HAGL+++G +++ S+ + + +KP +E Y C +DL+ R
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +A V ++P + + I +G LL AC TY +D+G +A L
Sbjct: 718 GRLDDAYSFVTQMPVEPNANI---WGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHV 774
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
+YA+ +WE V ++R+ MK +KK G S ++++G N G SH
Sbjct: 775 LISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSH 826
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 27 KPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCV-EKSL 85
KP +L C + G +G+ +H Y+I+ + DT+VG AL+ MYAK G + +
Sbjct: 119 KPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAY 178
Query: 86 EVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAG 145
F+G+ +KD SW +II G + N A F M K +P+ T VL C+
Sbjct: 179 TAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 146 ---LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKL 193
GR++ + + ++ ++ + R G + EA L ++
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRM 289
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 5/158 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCA---QSGALEHGRWIHDYVI 57
+I G+ + N +A F M +P+ + +L CA ++ A GR IH YV+
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 58 ENR-IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKAL 116
+ + V +L+ Y + G +E++ +F + KD SW +I G A N + KA
Sbjct: 255 QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAF 314
Query: 117 ELFEAMEKLG-AKPDDVTFITVLSACSHAGLVEEGRKL 153
+LF + G PD VT I++L C+ + G+++
Sbjct: 315 QLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEI 352
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I GY + +A LF ++ +G V PD ++++L CAQ L G+ IH Y++ +
Sbjct: 300 VIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRH 359
Query: 60 RIMV-DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
++ DT VG ALI YA+ G + F+ + KD SW +I+ A + K + L L
Sbjct: 360 SYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNL 419
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+ D VT +++L C + + + +++ H S K
Sbjct: 420 LHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEV-HGYSVK------------------ 460
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYG-ALLSACRTYGNIDMGERL 224
AGLLH+ EE P G ALL A GN++ ++
Sbjct: 461 -AGLLHDEEE--------------PKLGNALLDAYAKCGNVEYAHKI 492
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Query: 25 GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKS 84
G D + + ++ CA L GR +H V + + + V +++ MYAK ++
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 85 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLG-AKPDDVTFITVLSACSH 143
++F + D W ++ GL+++ + + F+AM KP VTF VL C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVSCG-RETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 144 AGLVEEGRKLFHSMSSKYHIKPNLE 168
G G+ + HS Y IK LE
Sbjct: 135 LGDSYNGKSM-HS----YIIKAGLE 154
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/275 (33%), Positives = 152/275 (55%), Gaps = 4/275 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY + EA+ LF ++++ G KPD +V +L CA+ G+ +H YVI
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLG 338
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +D V +ALI+MY+K G ++ ++ +F G+ EK+ S+ S+I GL ++G + A E F
Sbjct: 339 LELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFT 398
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+ ++G PD++TF +L C H+GL+ +G+++F M S++ I+P EHY + L+G A
Sbjct: 399 EILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMA 458
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXX-XXXXXXXX 239
G L EA E VM L D I+ GALLS C + N + E +A +
Sbjct: 459 GKLEEAFEFVMSLQKPIDSGIL---GALLSCCEVHENTHLAEVVAENIHKNGEERRSVYK 515
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYS 274
+YA RW++V ++R + + K+PG S
Sbjct: 516 VMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 99/197 (50%), Gaps = 1/197 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY +D+ I LF MQ RG +P+ + +VAL +G L +H + ++
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VG AL+ MY++ C+ + VFN + E D + +S+I G + G +AL LF
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+ G KPD V VL +C+ G+++ HS + ++ +++ ID+ +
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEV-HSYVIRLGLELDIKVCSALIDMYSKC 356
Query: 181 GLLHEAEELVMKLPDQT 197
GLL A L +P++
Sbjct: 357 GLLKCAMSLFAGIPEKN 373
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I Y + ++F ++LF + +PD F L G ++S + R IH I +
Sbjct: 77 IIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSG 136
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D + G+A+++ Y+K+G + ++ ++F + + D A W +I G G +K + LF
Sbjct: 137 LGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFN 196
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLE---HYGC-FIDL 176
M+ G +P+ T + + S GL++ L + +K NL+ + GC +++
Sbjct: 197 LMQHRGHQPNCYTMVALTS-----GLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNM 251
Query: 177 LGRAGLLHEA 186
R + A
Sbjct: 252 YSRCMCIASA 261
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 151/280 (53%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ +V ++EA+ F M + V P+ + ++L+ A L G IH V++
Sbjct: 409 MISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMN 468
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I+ D V +L+ MY K G + ++F+ + E + S+ ++I G + NG KAL+LF
Sbjct: 469 IVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFS 528
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+E G +P+ VTF+ +LSAC H G V+ G K F SM S Y+I+P +HY C +DLLGR+
Sbjct: 529 MLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRS 588
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL +A L+ +P + ++G+LLSA +T+ +D+ E A L
Sbjct: 589 GLLDDASNLISTMPCKPHS---GVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYV 645
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+Y+ + D +++ + K IKK PG S I L+G
Sbjct: 646 VLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKG 685
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GY + F++ LF M+ G VK + + + C G IH V
Sbjct: 245 MIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRM 304
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ D +G +L+ MY+K G + ++ VF +K KD+ SW S+I GL + ++A ELF
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 120 EAM-------------------------EKLGAKP--DDVTFITVLSACSHAGLVEEGRK 152
E M E G P D++T+ ++SA G EE
Sbjct: 365 EKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALC 424
Query: 153 LFHSMSSKYHIKPN 166
FH M K + PN
Sbjct: 425 WFHKMLQK-EVCPN 437
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 38/251 (15%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ Y + EA A+FG M+ + D +L+TG Q + + E
Sbjct: 316 LMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAY----ELFEKM 367
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V T +I+ ++ G + K +E+F + EKD +WT++I NG +AL F
Sbjct: 368 PGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFH 427
Query: 121 AMEKLGAKPDDVTFITVLSA-CSHAGLVE----EGRKL-------------FHSMSSK-- 160
M + P+ TF +VLSA S A L+E GR + SM K
Sbjct: 428 KMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCG 487
Query: 161 -----YHI-----KPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
Y I +PN+ Y I G +A +L L E + ALLS
Sbjct: 488 NTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLS 547
Query: 211 ACRTYGNIDMG 221
AC G +D+G
Sbjct: 548 ACVHVGYVDLG 558
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 12/199 (6%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G+V+ RFDEA L+ + P KF ++ + SG L G+W +
Sbjct: 150 MITGFVRAGRFDEAEFLYAE------TPVKF-RDSVASNVLLSGYLRAGKWNEAVRVFQG 202
Query: 61 IMVDTVVG-TALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ V VV ++++ Y K G + + +F+ + E++ +WT++I G G LF
Sbjct: 203 MAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLF 262
Query: 120 EAMEKLG-AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
M + G K + T + AC EG ++ H + S+ ++ +L + +
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI-HGLVSRMPLEFDLFLGNSLMSMYS 321
Query: 179 RAGLLHEAEEL--VMKLPD 195
+ G + EA+ + VMK D
Sbjct: 322 KLGYMGEAKAVFGVMKNKD 340
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 144/278 (51%), Gaps = 8/278 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ GY Q ++AI +F +M+ + D + +L CA A+ G+ IH +
Sbjct: 337 LLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +V +ALI++Y KSGC++ + V++ + ++ +W +++ LA NG+ +A+ F
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M K G KPD ++FI +L+AC H G+V+EGR F M+ Y IKP EHY C IDLLGRA
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID-MGERLATTLXXXXXXXXXXX 239
GL EAE L+ + + D L+G LL C + + ER+A +
Sbjct: 513 GLFEEAENLLERAECRND---ASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSY 569
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
+Y + R D +R M G+ K G S ID
Sbjct: 570 VLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 114/212 (53%), Gaps = 10/212 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQV-RGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+++ + + + ++EA+ LF M +G+ PD +LT C L+ G+ IH +I N
Sbjct: 235 VLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN 294
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
I + VV ++L++MY K G V ++ +VFNG+ +K++ SW++++ G NG+ KA+E+F
Sbjct: 295 GIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIF 354
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
ME + D F TVL AC+ V G+++ H + N+ IDL G+
Sbjct: 355 REME----EKDLYCFGTVLKACAGLAAVRLGKEI-HGQYVRRGCFGNVIVESALIDLYGK 409
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSA 211
+G + A + K+ + + + A+LSA
Sbjct: 410 SGCIDSASRVYSKMSIRN----MITWNAMLSA 437
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 2/190 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++GYV +A+ +F +M G+ ++F + + + C++ G + GR H VI +
Sbjct: 134 MMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHG 193
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + + L +Y + + VF+ + E D WT+++ + N +AL LF
Sbjct: 194 FEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFY 253
Query: 121 AMEK-LGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
AM + G PD TF TVL+AC + +++G+++ H I N+ +D+ G+
Sbjct: 254 AMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEI-HGKLITNGIGSNVVVESSLLDMYGK 312
Query: 180 AGLLHEAEEL 189
G + EA ++
Sbjct: 313 CGSVREARQV 322
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 7 QFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTV 66
+ + EAI + + + +LL C + + HG H +V+++ + D
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 67 VGTALIEMYAKSGC-VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKL 125
VG +L+ +Y K G + ++ VF+G KD SWTS++ G + KALE+F M
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 126 GAKPDDVTFITVLSACSHAGLVEEGRKLFH 155
G ++ T + + ACS G V GR FH
Sbjct: 158 GLDANEFTLSSAVKACSELGEVRLGR-CFH 186
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 166 bits (419), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 134/262 (51%), Gaps = 3/262 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
AI + M KP+ ++AL++ C+ GA + IH Y N I + + L+
Sbjct: 165 RAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLV 224
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
E Y + G + VF+ ++++D +W+S+I A++G AL+ F+ ME PDD+
Sbjct: 225 EAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDI 284
Query: 133 TFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMK 192
F+ VL ACSHAGL +E F M Y ++ + +HY C +D+L R G EA +++
Sbjct: 285 AFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQA 344
Query: 193 LPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADRW 252
+P++ +GALL ACR YG I++ E A L IY S R
Sbjct: 345 MPEKP---TAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQ 401
Query: 253 EDVNKVRSKMKDLGIKKVPGYS 274
E+ ++R KMK+ G+K PG S
Sbjct: 402 EEAERLRLKMKESGVKVSPGSS 423
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 109/252 (43%), Gaps = 39/252 (15%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGVKP-DKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ Y ++A+ LF M P D + L CA + G +H + +++
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VG AL++MY K V + ++F+ + +++ W ++I GK +A+EL+E
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 121 AME---------------------------------KLGAKPDDVTFITVLSACSHAGLV 147
AM+ + KP+ +T + ++SACS G
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGA 207
+++ HS + + I+P+ + ++ GR G + V + D ++ V + +
Sbjct: 199 RLIKEI-HSYAFRNLIEPHPQLKSGLVEAYGRCGSI----VYVQLVFDSMEDRDVVAWSS 253
Query: 208 LLSACRTYGNID 219
L+SA +G+ +
Sbjct: 254 LISAYALHGDAE 265
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 164 bits (416), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 157/280 (56%), Gaps = 6/280 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCA--QSGALEHGRWIHDYVIE 58
MI+G+ Q EA+ +F + P+++ ++L A + +++ G+ H ++++
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ VV +AL++MYAK G +++S +VFN + +K+ WTSII + +G + L
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M K PD VTF++VL+AC+ G+V++G ++F+ M Y+++P+ EHY C +D+LG
Sbjct: 563 FHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLG 622
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
RAG L EAEEL+ ++P E + ++L +CR +GN+ MG ++A
Sbjct: 623 RAGRLKEAEELMSEVPGGPGE---SMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGS 679
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
IYA + W+ ++R M+ + K G+S ID+
Sbjct: 680 YVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 112/212 (52%), Gaps = 12/212 (5%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
D+A+++F +M+ GV P++ V L+ + ++ G IH I+ + + VG +
Sbjct: 354 DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSF 413
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF--EAMEKLGAKP 129
I +YAK +E + + F + ++ SW ++I G A NG +++AL++F A E + P
Sbjct: 414 ITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM---P 470
Query: 130 DDVTFITVLSACSHAG--LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAE 187
++ TF +VL+A + A V++G++ H+ K + +D+ + G + E+E
Sbjct: 471 NEYTFGSVLNAIAFAEDISVKQGQRC-HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESE 529
Query: 188 ELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
++ ++ + + + +++SA ++G+ +
Sbjct: 530 KVFNEMSQKNQFV----WTSIISAYSSHGDFE 557
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 85/178 (47%), Gaps = 2/178 (1%)
Query: 21 MQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGC 80
M+ GV D F L+ C S G + V++ + D VVG + I MY++SG
Sbjct: 165 MKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
Query: 81 VEKSLEVFNGLKEKDTASWTSIICGLAMNGKTN-KALELFEAMEKLGAKPDDVTFITVLS 139
+ VF+ + KD SW S++ GL+ G +A+ +F M + G + D V+F +V++
Sbjct: 225 FRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVIT 284
Query: 140 ACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
C H ++ R++ H + K + LE + + G+L + + ++ ++
Sbjct: 285 TCCHETDLKLARQI-HGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN 341
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 83/176 (47%), Gaps = 6/176 (3%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
EA+ +F DM GV+ D +++T C L+ R IH I+ VG L+
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
Y+K G +E VF+ + E++ SWT++I + + A+ +F M G P++V
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPNEV 373
Query: 133 TFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEE 188
TF+ +++A ++EG K+ H + K FI L + L +A++
Sbjct: 374 TFVGLINAVKCNEQIKEGLKI-HGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKK 428
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 3/295 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q F EA+ LF +Q + D F + +++ A L G+ + ++
Sbjct: 284 LILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP 343
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++T V ++++MY K G V+++ + F ++ KD SWT +I G +G K++ +F
Sbjct: 344 SGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFY 403
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + +PD+V ++ VLSACSH+G+++EG +LF + + IKP +EHY C +DLLGRA
Sbjct: 404 EMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRA 463
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA+ L+ +P + + V ++ LLS CR +G+I++G+ + L
Sbjct: 464 GRLKEAKHLIDTMPIKPN---VGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYV 520
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLT 295
+Y A W + R G+KK G S +++E + G SH LT
Sbjct: 521 MMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLT 575
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 106/200 (53%), Gaps = 3/200 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++G+V +++LF +M +G+ P++F L C ALE G IH + ++
Sbjct: 78 LMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG 137
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VG +L++MY+K G + ++ +VF + ++ SW ++I G G +KAL+ F
Sbjct: 138 FEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG 197
Query: 121 AMEK--LGAKPDDVTFITVLSACSHAGLVEEGRKLFHSM-SSKYHIKPNLEHYGCFIDLL 177
M++ + +PD+ T ++L ACS G++ G+++ + S +H + G +DL
Sbjct: 198 MMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLY 257
Query: 178 GRAGLLHEAEELVMKLPDQT 197
+ G L A + ++ ++T
Sbjct: 258 VKCGYLFSARKAFDQIKEKT 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 125/263 (47%), Gaps = 36/263 (13%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVK--PDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
MI G+V +A+ FG MQ +K PD+F + +LL C+ +G + G+ IH +++
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVR 238
Query: 59 NRIMVDT--VVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKAL 116
+ + + +L+++Y K G + + + F+ +KEK SW+S+I G A G+ +A+
Sbjct: 239 SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAM 298
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF+ +++L ++ D +++ + L+ +G+++ +++ K +D+
Sbjct: 299 GLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM-QALAVKLPSGLETSVLNSVVDM 357
Query: 177 LGRAGLLHEAEELV--MKLPDQTD-EIIVPLYG--------------------------- 206
+ GL+ EAE+ M+L D +++ YG
Sbjct: 358 YLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCY 417
Query: 207 -ALLSACRTYGNIDMGERLATTL 228
A+LSAC G I GE L + L
Sbjct: 418 LAVLSACSHSGMIKEGEELFSKL 440
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 89/165 (53%), Gaps = 1/165 (0%)
Query: 33 VVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK 92
+V++L C + G + G +H Y++++ ++ + LI+MY K + +VF+ +
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 93 EKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRK 152
E++ SW++++ G +NG +L LF M + G P++ TF T L AC +E+G +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 153 LFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQT 197
+ H K + +E +D+ + G ++EAE++ ++ D++
Sbjct: 129 I-HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRS 172
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 145/276 (52%), Gaps = 6/276 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ Q + EA F M + P + +LL+ C+ L++G+ IH +VI+
Sbjct: 339 LISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAA 398
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL--KEKDTASWTSIICGLAMNGKTNKALEL 118
D V T+LI+MY K G + +F+ K KD W +I G +G+ A+E+
Sbjct: 399 AERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEI 458
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
FE + + +P TF VLSACSH G VE+G ++F M +Y KP+ EH GC IDLLG
Sbjct: 459 FELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLG 518
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
R+G L EA+E++ DQ E +Y +LL +CR + + +GE A L
Sbjct: 519 RSGRLREAKEVI----DQMSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPENPAP 574
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYS 274
IYA+ +RWEDV +R + + K+PG S
Sbjct: 575 FVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 87/152 (57%), Gaps = 5/152 (3%)
Query: 27 KPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLE 86
+P+ V +T CA L++GR +H V++ +T+VGTALI+MY+K C + +
Sbjct: 228 EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYI 287
Query: 87 VFNGLKE-KDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAG 145
VF LK+ ++ SW S+I G+ +NG+ A+ELFE ++ G KPD T+ +++S S G
Sbjct: 288 VFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG 347
Query: 146 LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
V E K F M S + P+L+ C LL
Sbjct: 348 KVIEAFKFFERMLSVVMV-PSLK---CLTSLL 375
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 4/153 (2%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRI 61
++G ++ +A +FGD +V G + V ++L GC G +E G +H +++
Sbjct: 104 VSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGF 160
Query: 62 MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 121
++ VGT+L+ MY++ G + +F + K ++ + I GL NG N +F
Sbjct: 161 EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNL 220
Query: 122 MEKLGA-KPDDVTFITVLSACSHAGLVEEGRKL 153
M K + +P+DVTF+ ++AC+ ++ GR+L
Sbjct: 221 MRKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 8/193 (4%)
Query: 28 PDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEV 87
P+KF LL CA+ G + GR +H V++ VD TAL+ MY K V +L+V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 88 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLV 147
+ + E+ AS + + GL NG A +F G+ + VT +VL C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGA 207
E G +L H ++ K + + + + R G A + K+P ++ V Y A
Sbjct: 146 EGGMQL-HCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKS----VVTYNA 200
Query: 208 LLSACRTYGNIDM 220
+S G +++
Sbjct: 201 FISGLMENGVMNL 213
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 152/278 (54%), Gaps = 16/278 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+NGY+ + +EA+A F M+V +P+ V ++ A+ AL G +H +I+
Sbjct: 575 MMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCG 634
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
T VG +L++MYAK G +E S + F + K SW +++ A +G + A+ LF
Sbjct: 635 FCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFL 694
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+M++ KPD V+F++VLSAC HAGLVEEG+++F M ++ I+ +EHY C +DLLG+A
Sbjct: 695 SMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKA 754
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GL EA E++ ++ +T V ++GALL++ R + N+ + L
Sbjct: 755 GLFGEAVEMMRRMRVKTS---VGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSH-- 809
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
Y+ R +VN V IKKVP S I++
Sbjct: 810 -----YSQDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 92/190 (48%), Gaps = 5/190 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y Q + DEAI+LF DM +KP+ + ++L GCA A G+ IH Y I+
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I + TA+I MYAK G +L+ F L KD ++ ++ G G NKA ++++
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 121 AMEKLGAKPDDVTFITVLSACSHA-----GLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
M+ G PD T + +L C+ G G+ + H S+ H+ L + D
Sbjct: 492 NMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCD 551
Query: 176 LLGRAGLLHE 185
L A +L +
Sbjct: 552 ALAAAIVLFD 561
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI GY + EA+ FG M + +G+ PDK+ L CA S + G IHD + E
Sbjct: 70 MIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEM 129
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ D +GTAL+EMY K+ + + +VF+ + KD +W +++ GLA NG ++ AL LF
Sbjct: 130 GLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF 189
Query: 120 EAMEKLGAKPDDVTFITVLSACS 142
M D V+ ++ A S
Sbjct: 190 HDMRSCCVDIDHVSLYNLIPAVS 212
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 1/194 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ Y F+E + LF M+ V+ +K + L A G L G IHDY ++
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ D V T+L+ MY+K G +E + ++F ++++D SW+++I G+ ++A+ LF
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M ++ KP+ VT +VL C+ G+ + H + K I+ LE I + +
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSI-HCYAIKADIESELETATAVISMYAKC 449
Query: 181 GLLHEAEELVMKLP 194
G A + +LP
Sbjct: 450 GRFSPALKAFERLP 463
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 41/260 (15%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ GY Q ++A ++ +M++ GV PD +V +L CA G ++ +I++
Sbjct: 473 LAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHG 532
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELF 119
+ V ALI M+ K + ++ +F+ EK T SW ++ G ++G+ +A+ F
Sbjct: 533 FDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF 592
Query: 120 EAMEKLGAKPDDVTFITVLSA----------------------CSH-------------A 144
M+ +P+ VTF+ ++ A CS
Sbjct: 593 RQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKC 652
Query: 145 GLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPL 204
G++E K F +S+KY + N + GL A L + + + +
Sbjct: 653 GMIESSEKCFIEISNKYIVSWNT-----MLSAYAAHGLASCAVSLFLSMQENELKPDSVS 707
Query: 205 YGALLSACRTYGNIDMGERL 224
+ ++LSACR G ++ G+R+
Sbjct: 708 FLSVLSACRHAGLVEEGKRI 727
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 88/196 (44%), Gaps = 3/196 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++G Q A+ LF DM+ V D + L+ ++ + R +H VI+
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + LI+MY + + VF + KD +SW +++ A NG + LELF+
Sbjct: 232 FIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + + V + L A ++ G + +G + H + + + ++ + + +
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI-HDYAVQQGLIGDVSVATSLMSMYSKC 348
Query: 181 GLLHEAEELVMKLPDQ 196
G L AE+L + + D+
Sbjct: 349 GELEIAEQLFINIEDR 364
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 116/194 (59%), Gaps = 1/194 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ G + R ++A++ F MQV KP K+ + LL GCA AL G+ IH ++I +
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDG 526
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+D V+ A+++MY+K C + ++EVF +D W SII G NG++ + ELF
Sbjct: 527 YKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFM 586
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+E G KPD VTF+ +L AC G VE G + F SMS+KYHI P +EHY C I+L +
Sbjct: 587 LLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKY 646
Query: 181 GLLHEAEELVMKLP 194
G LH+ EE ++ +P
Sbjct: 647 GCLHQLEEFLLLMP 660
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 35/241 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ Y++ DEA+ +F M V+P V +++ C++S ALE G+ IH ++
Sbjct: 234 IVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLS 293
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ DTVV T++ +MY K +E + VF+ + KD SWTS + G AM+G T +A ELF+
Sbjct: 294 VVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFD 353
Query: 121 AMEK---------LGA----------------------KPDDVTFITVLSACSHAGLVEE 149
M + LG D+VT + +L+ CS V+
Sbjct: 354 LMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQM 413
Query: 150 GRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
G++ H ++ N+ +D+ G+ G L A ++ + DE+ + ALL
Sbjct: 414 GKQA-HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVS---WNALL 469
Query: 210 S 210
+
Sbjct: 470 T 470
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 7/213 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GYV + +DEA+ M+ D +V +L C+ ++ G+ H ++ +
Sbjct: 366 MLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHG 425
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELF 119
+ +V AL++MY K G ++ + F + E +D SW +++ G+A G++ +AL F
Sbjct: 426 YDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFF 485
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
E M+ + AKP T T+L+ C++ + G K H + K ++ G +D+ +
Sbjct: 486 EGMQ-VEAKPSKYTLATLLAGCANIPALNLG-KAIHGFLIRDGYKIDVVIRGAMVDMYSK 543
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSAC 212
A E V K D I L+ +++ C
Sbjct: 544 CRCFDYAIE-VFKEAATRDLI---LWNSIIRGC 572
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 12/170 (7%)
Query: 36 LLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD 95
L C+ + R + +++ + + IE Y K GCV+ + E+F + E+D
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERD 126
Query: 96 TASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL-- 153
SW ++I A NG +++ +F M + G + + +F VL +C GL+ + R L
Sbjct: 127 GGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC---GLILDLRLLRQ 183
Query: 154 FHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVP 203
H KY N++ +D+ G+ ++ +A + DEI+ P
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVF-------DEIVNP 226
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 71/152 (46%), Gaps = 1/152 (0%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
DE +F M GV+ + +L C L R +H V++ + + T++
Sbjct: 144 DEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSI 203
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
+++Y K + + VF+ + SW I+ G ++A+ +F M +L +P +
Sbjct: 204 VDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLN 263
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHI 163
T +V+ ACS + +E G K+ H+++ K +
Sbjct: 264 HTVSSVMLACSRSLALEVG-KVIHAIAVKLSV 294
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 162 bits (409), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/278 (32%), Positives = 149/278 (53%), Gaps = 5/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I Y + + EA+ LF M + G KPD + +LL+ L G +H V++
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT- 438
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELF 119
++ D V ALI MY++ G + +S +F+ +K +++ +W ++I G A +G ++AL LF
Sbjct: 439 VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLF 498
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+M+ G P +TF++VL+AC+HAGLV+E + F SM S Y I+P +EHY +++
Sbjct: 499 GSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSG 558
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G EA ++ +P + D+ + +GALL ACR Y N+ + A +
Sbjct: 559 QGQFEEAMYIITSMPFEPDKTV---WGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPY 615
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
+YA W++ ++VR M+ IKK G S +D
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 86/219 (39%), Gaps = 48/219 (21%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GYV +R ++A ALF +M R
Sbjct: 318 MIDGYVHVSRMEDAFALFSEMPNR------------------------------------ 341
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D ++ YA G VE + F EK T SW SII N +A++LF
Sbjct: 342 ---DAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFI 398
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G KPD T ++LSA + + G ++ H + K I P++ + I + R
Sbjct: 399 RMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQM-HQIVVKTVI-PDVPVHNALITMYSRC 456
Query: 181 GLLHEAEELV--MKLPDQTDEIIVPLYGALLSACRTYGN 217
G + E+ + MKL + V + A++ +GN
Sbjct: 457 GEIMESRRIFDEMKLKRE-----VITWNAMIGGYAFHGN 490
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GYV+ ++A LF M R V ++ ++ C LE R + D +
Sbjct: 77 MISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVS-CGGIRFLEEARKLFDEMPSR- 134
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D+ +I YAK+ + ++L +F + E++ SW+++I G NG+ + A+ LF
Sbjct: 135 ---DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFR 191
Query: 121 AMEKLGAKP 129
M + P
Sbjct: 192 KMPVKDSSP 200
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 50/87 (57%), Gaps = 7/87 (8%)
Query: 77 KSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFIT 136
+SG + ++ ++F L+ ++T +W ++I G + N+A +LF+ M K D VT+ T
Sbjct: 52 RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVM----PKRDVVTWNT 107
Query: 137 VLS---ACSHAGLVEEGRKLFHSMSSK 160
++S +C +EE RKLF M S+
Sbjct: 108 MISGYVSCGGIRFLEEARKLFDEMPSR 134
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 75/210 (35%), Gaps = 48/210 (22%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVV-------------------------- 34
MI G+ Q D A+ LF M V+ P +V
Sbjct: 173 MITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRE 232
Query: 35 -------ALLTGCAQSGALEHGRWIHDYV-----------IENRIMVDTVVGTALIEMYA 76
L+ G Q G +E R + D + R + V ++I+ Y
Sbjct: 233 DLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYL 292
Query: 77 KSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFIT 136
K G V + +F+ +K++DT SW ++I G + A LF M A ++
Sbjct: 293 KVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----SWNM 348
Query: 137 VLSACSHAGLVEEGRKLFHSMSSKYHIKPN 166
++S + G VE R F K+ + N
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWN 378
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 161 bits (408), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 142/277 (51%), Gaps = 3/277 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M NG+ Q E + F M + D+ + ++++ CA +LE G +
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVG 480
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D VV ++LI++Y K G VE VF+ + + D W S+I G A NG+ +A++LF+
Sbjct: 481 LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFK 540
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G +P +TF+ VL+AC++ GLVEEGRKLF SM + P+ EH+ C +DLL RA
Sbjct: 541 KMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARA 600
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G + EA LV ++P D ++ ++L C G MG++ A +
Sbjct: 601 GYVEEAINLVEEMPFDVDG---SMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYV 657
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
I+A++ WE VR M++ + K PG S D
Sbjct: 658 QLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 32/185 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY+ N EA+ LF +M+ + D + A++ C G LE G+ +H + +
Sbjct: 290 MISGYIANNMKMEALVLFNEMR-NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFG 348
Query: 61 IMVDTVVGTALIEMYAKSGC-------------------------------VEKSLEVFN 89
++ D VV + L++MY+K G ++ + VF
Sbjct: 349 LIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 408
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEE 149
++ K SW S+ G + NG T + LE F M KL D+V+ +V+SAC+ +E
Sbjct: 409 RIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLEL 468
Query: 150 GRKLF 154
G ++F
Sbjct: 469 GEQVF 473
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 112/254 (44%), Gaps = 38/254 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++GY+ +EA+ LF ++ D + +L CA+ AL+ G+ IH ++
Sbjct: 161 LLHGYILNGYAEEALRLFKELNF---SADAITLTTVLKACAELEALKCGKQIHAQILIGG 217
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D+ + ++L+ +YAK G + + + ++E D S +++I G A G+ N++ LF+
Sbjct: 218 VECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFD 277
Query: 121 ----------------------AMEKL--------GAKPDDVTFITVLSACSHAGLVEEG 150
ME L + D T V++AC G +E G
Sbjct: 278 RKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETG 337
Query: 151 RKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
+++ H + K+ + ++ +D+ + G EA KL + + L +++
Sbjct: 338 KQM-HCHACKFGLIDDIVVASTLLDMYSKCGSPMEA----CKLFSEVESYDTILLNSMIK 392
Query: 211 ACRTYGNIDMGERL 224
+ G ID +R+
Sbjct: 393 VYFSCGRIDDAKRV 406
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 77/159 (48%), Gaps = 12/159 (7%)
Query: 66 VVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKL 125
+V L++MY++SG + + +F+ + +++ SW ++I G +G+ +L F+ M
Sbjct: 63 IVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM--- 119
Query: 126 GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHE 185
+ D ++ V+S + AG + R+LF++M K + N +G ++ G E
Sbjct: 120 -PERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN-----GYAEE 173
Query: 186 AEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
A L +L D I + +L AC + G+++
Sbjct: 174 ALRLFKELNFSADAITLT---TVLKACAELEALKCGKQI 209
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 161 bits (407), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 93/281 (33%), Positives = 149/281 (53%), Gaps = 4/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+NG VQ +EAI MQ G++P+ F + L+ CA +L GR IH Y+I N
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 61 IMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
V + T+L++MYAK G + K+ +VF + ++I A+ G +A+ L+
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALY 636
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
++E +G KPD++T VLSAC+HAG + + ++F + SK +KP LEHYG +DLL
Sbjct: 637 RSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLAS 696
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
AG +A L+ ++P + D ++ +L+++C ++ + L+ L
Sbjct: 697 AGETEKALRLIEEMPFKPDARMIQ---SLVASCNKQRKTELVDYLSRKLLESEPENSGNY 753
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
YA W++V K+R MK G+KK PG S I + G
Sbjct: 754 VTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITG 794
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 108/208 (51%), Gaps = 5/208 (2%)
Query: 4 GYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMV 63
GYVQ + +EAI LF DM+ +GV+P + V L+ A G +E G+ H I N + +
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL 307
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 123
D ++GT+L+ Y K G +E + VF+ + EKD +W II G G A+ + + M
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMR 367
Query: 124 KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLL 183
K D VT T++SA + ++ G+++ ++ + ++ +D+ + G +
Sbjct: 368 LEKLKYDCVTLATLMSAAARTENLKLGKEV-QCYCIRHSFESDIVLASTVMDMYAKCGSI 426
Query: 184 HEAEELVMKLPDQTDEIIVPLYGALLSA 211
+A+ K+ D T E + L+ LL+A
Sbjct: 427 VDAK----KVFDSTVEKDLILWNTLLAA 450
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GYVQ ++AI + M++ +K D + L++ A++ L+ G+ + Y I +
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D V+ + +++MYAK G + + +VF+ EKD W +++ A +G + +AL LF
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G P+ +T+ ++ + G V+E + +F M S I PNL + ++ + +
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQN 524
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
G EA + K+ + LSAC ++ +G +
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTI 568
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 75/135 (55%)
Query: 18 FGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAK 77
F +M + PD F+V + C GR +H YV+++ + V ++L +MY K
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGK 220
Query: 78 SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITV 137
G ++ + +VF+ + +++ +W +++ G NGK +A+ LF M K G +P VT T
Sbjct: 221 CGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTC 280
Query: 138 LSACSHAGLVEEGRK 152
LSA ++ G VEEG++
Sbjct: 281 LSASANMGGVEEGKQ 295
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN--RIMVDTVVGTA 70
EA++L +M R ++ I +L GC L G+ IH +++N + + T
Sbjct: 53 EALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETK 112
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
L+ YAK +E + +F+ L+ ++ SW +II G AL F M + PD
Sbjct: 113 LVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPD 172
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEH----YGCFIDLLGRAGLLHEA 186
+ V AC GR + Y +K LE D+ G+ G+L +A
Sbjct: 173 NFVVPNVCKACGALKWSRFGRGVH-----GYVVKSGLEDCVFVASSLADMYGKCGVLDDA 227
Query: 187 EELVMKLPDQT 197
++ ++PD+
Sbjct: 228 SKVFDEIPDRN 238
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 148/269 (55%), Gaps = 5/269 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
EA+ LF M G+ D ++ +L+ A AL GR IH Y++ ++ + A++
Sbjct: 570 EAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
+MYA G ++ + VF+ ++ K +TS+I M+G A+ELF+ M PD +
Sbjct: 630 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHI 689
Query: 133 TFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELV-M 191
+F+ +L ACSHAGL++EGR M +Y ++P EHY C +D+LGRA + EA E V M
Sbjct: 690 SFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADR 251
+ T E+ + ALL+ACR++ ++GE A L ++A R
Sbjct: 750 MKTEPTAEV----WCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGR 805
Query: 252 WEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
W DV KVR+KMK G++K PG S I+++G
Sbjct: 806 WNDVEKVRAKMKASGMEKHPGCSWIEMDG 834
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 7/197 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI YV A+AL+ +M+V GV ALL CA+ + G +H +++
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELF 119
+ AL+ MYAK+ + + +F+G +EK D W SI+ + +GK+ + LELF
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHS-MSSKYHIKPNLEHYGC--FIDL 176
M G P+ T ++ L+AC + G+++ S + S H + E Y C I +
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH---SSELYVCNALIAM 329
Query: 177 LGRAGLLHEAEELVMKL 193
R G + +AE ++ ++
Sbjct: 330 YTRCGKMPQAERILRQM 346
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GYVQ + EA+ F DM G K D+ + +++ + L G +H YVI++
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VG LI+MY+K F + +KD SWT++I G A N +ALELF
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFR 476
Query: 121 AMEKLGAKPDDVTFITVLSACS 142
+ K + D++ ++L A S
Sbjct: 477 DVAKKRMEIDEMILGSILRASS 498
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q + EA+ LF D+ + ++ D+ I+ ++L + ++ + IH +++ +
Sbjct: 458 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILR-K 516
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++DTV+ L+++Y K + + VF +K KD SWTS+I A+NG ++A+ELF
Sbjct: 517 GLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFR 576
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
M + G D V + +LSA + + +GR++
Sbjct: 577 RMVETGLSADSVALLCILSAAASLSALNKGREI 609
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 2/183 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ Y + E + LF +M + G P+ + +V+ LT C + G+ IH V+++
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS 314
Query: 61 IMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ V ALI MY + G + ++ + + D +W S+I G N +ALE F
Sbjct: 315 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 374
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G K D+V+ ++++A + G +L H+ K+ NL+ ID+ +
Sbjct: 375 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMEL-HAYVIKHGWDSNLQVGNTLIDMYSK 433
Query: 180 AGL 182
L
Sbjct: 434 CNL 436
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 36 LLTGCAQSGALEHGRWIHDYVIEN--RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE 93
+L C + A+ GR +H + + +D + G L+ MY K G ++ + +VF+ + +
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFDEMPD 144
Query: 94 KDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+ +W ++I NG+ AL L+ M G +F +L AC+ + G +L
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 154 FHSMSSK--YH 162
HS+ K YH
Sbjct: 205 -HSLLVKLGYH 214
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 160 bits (404), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/268 (32%), Positives = 139/268 (51%), Gaps = 7/268 (2%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
+ AI LFG ++ + PD + ++L CA H IH VI+ + DTV+ +L
Sbjct: 351 ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
I YAK G ++ + VF+ + +D SW S++ +++G+ + L +F+ M+ PD
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDS 467
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
TFI +LSACSHAG VEEG ++F SM K P L HY C ID+L RA EAEE++
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXX-XXXXXXXXXXXIYASAD 250
++P D ++ + ALL +CR +GN +G+ A L IY +
Sbjct: 528 QMPMDPDAVV---WIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEG 584
Query: 251 RWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
+ + N +M+ ++K P S ++
Sbjct: 585 SFNEANLSIKEMETWRVRKEPDLSWTEI 612
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 80/170 (47%), Gaps = 10/170 (5%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMV--DTVVGTA 70
A++LF V + AL CA+ L G +H +++ + + ++
Sbjct: 44 RAVSLFYSAPVELQSQQAY--AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANF 101
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
LI MYAK G + + +VF+ + E++ SWT++I G G + LF +M P+
Sbjct: 102 LINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS-HCFPN 160
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+ T +VL++C + E G+++ H ++ K + ++ I + GR
Sbjct: 161 EFTLSSVLTSCRY----EPGKQV-HGLALKLGLHCSIYVANAVISMYGRC 205
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GYVQ E LF M + P++F + ++LT C E G+ +H ++
Sbjct: 133 LITGYVQAGNEQEGFCLFSSM-LSHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLG 187
Query: 61 IMVDTVVGTALIEMYAKS---GCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ V A+I MY + ++ VF +K K+ +W S+I KA+
Sbjct: 188 LHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIG 247
Query: 118 LFEAMEKLGAKPDDVTFITVLSA 140
+F M G D T + + S+
Sbjct: 248 VFMRMHSDGVGFDRATLLNICSS 270
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 157/297 (52%), Gaps = 6/297 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GY Q +EA+ LF + + + + ++++ CA S LE GR IH I++
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSS 247
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VG++L+ +Y+K G E + +VFN + K+ W +++ A + T K +ELF+
Sbjct: 248 FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFK 307
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G KP+ +TF+ VL+ACSHAGLV+EGR F M I+P +HY +D+LGRA
Sbjct: 308 RMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKES-RIEPTDKHYASLVDMLGRA 366
Query: 181 GLLHEAEELVMKLP-DQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G L EA E++ +P D T+ + +GALL++C + N ++ A +
Sbjct: 367 GRLQEALEVITNMPIDPTESV----WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMH 422
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
YA+ R+ED K R ++D G KK G S ++ ++ G H +K
Sbjct: 423 ISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSK 479
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Query: 14 AIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIE 73
++ M ++PD ++ + CA + GR +H ++ D VG++L++
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 74 MYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVT 133
MYAK G + + ++F+ + +++ +W+ ++ G A G+ +AL LF+ +D +
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYS 219
Query: 134 FITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKL 193
F +V+S C+++ L+E GR++ H +S K + + L + G+ A ++ ++
Sbjct: 220 FSSVISVCANSTLLELGRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEV 278
Query: 194 PDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
P + I + A T I++ +R+
Sbjct: 279 PVKNLGIWNAMLKAYAQHSHTQKVIELFKRM 309
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 159 bits (402), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 153/297 (51%), Gaps = 3/297 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY +A ++F + V + + L CA +++ G +H I+
Sbjct: 420 VIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN 479
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V +LI+MYAK G ++ + VFN ++ D ASW ++I G + +G +AL + +
Sbjct: 480 NAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILD 539
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ KP+ +TF+ VLS CS+AGL+++G++ F SM + I+P LEHY C + LLGR+
Sbjct: 540 IMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRS 599
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L +A +L+ +P + V ++ A+LSA N + R A +
Sbjct: 600 GQLDKAMKLIEGIPYEPS---VMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYV 656
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTKF 297
+YA A +W +V +R MK++G+KK PG S I+ +G + VG H K
Sbjct: 657 LVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKL 713
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 5/216 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI + Q +EA+ LF M+ V P++F + ++L GCA G +H V++
Sbjct: 319 MIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG 378
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+D V ALI++YAK ++ ++++F L K+ SW ++I G G+ KA +F
Sbjct: 379 FDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFR 438
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+ +VTF + L AC+ ++ G ++ H ++ K + + ID+ +
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQV-HGLAIKTNNAKKVAVSNSLIDMYAKC 497
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
G + A+ + ++ + I V + AL+S T+G
Sbjct: 498 GDIKFAQSVF----NEMETIDVASWNALISGYSTHG 529
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 95/198 (47%), Gaps = 1/198 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ YV+ F++++ L M++ G P+ + L GA + + +H +++
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++D VG L+++Y + G + + +VFN + + D W+ +I NG N+A++LF
Sbjct: 278 YVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + P++ T ++L+ C+ G +L H + K ++ ID+ +
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQL-HGLVVKVGFDLDIYVSNALIDVYAKC 396
Query: 181 GLLHEAEELVMKLPDQTD 198
+ A +L +L + +
Sbjct: 397 EKMDTAVKLFAELSSKNE 414
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 55/128 (42%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
+ I L+ + G + + + + L E W+H +++ + VG ALI
Sbjct: 129 DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALI 188
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
Y+ G V+ + VF G+ KD W I+ NG +L+L M G P++
Sbjct: 189 NAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNY 248
Query: 133 TFITVLSA 140
TF T L A
Sbjct: 249 TFDTALKA 256
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 152/280 (54%), Gaps = 6/280 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G NR EA+ M++ ++P+ + A L CA+ GAL G+ IH +V+
Sbjct: 470 IIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ +D + AL++MY + G + + FN K KD SW ++ G + G+ + +ELF+
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M K +PD++TFI++L CS + +V +G F M Y + PNL+HY C +DLLGRA
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRA 646
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA + + K+P D + +GALL+ACR + ID+GE A +
Sbjct: 647 GELQEAHKFIQKMPVTPDPAV---WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYI 703
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+YA +W +V KVR MK+ G+ G S ++++G
Sbjct: 704 LLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKG 743
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 115/259 (44%), Gaps = 39/259 (15%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
++ GY + FDEA+ L+ M V GVKPD + +L C L G+ +H +V+
Sbjct: 166 LVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRY 225
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+D V ALI MY K G V+ + +F+ + +D SW ++I G NG ++ LELF
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
AM L PD +T +V+SAC G GR + H+ ++ +
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLGDRRLGRDI-HAYVITTGFAVDISVCNSLTQMYLN 344
Query: 180 AGLLHEAEELVMK--------------------LPDQT--------------DEIIVPLY 205
AG EAE+L + LPD+ DEI V
Sbjct: 345 AGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITV--- 401
Query: 206 GALLSACRTYGNIDMGERL 224
A+LSAC T G++D G L
Sbjct: 402 AAVLSACATLGDLDTGVEL 420
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 102/197 (51%), Gaps = 1/197 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+GY + E + LF M+ V PD + ++++ C G GR IH YVI
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
VD V +L +MY +G ++ ++F+ ++ KD SWT++I G N +KA++ +
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ KPD++T VLSAC+ G ++ G +L H ++ K + + I++ +
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVEL-HKLAIKARLISYVIVANNLINMYSKC 446
Query: 181 GLLHEAEELVMKLPDQT 197
+ +A ++ +P +
Sbjct: 447 KCIDKALDIFHNIPRKN 463
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 78/131 (59%), Gaps = 3/131 (2%)
Query: 1 MINGYVQFNRF-DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GY ++N D+AI + M VKPD+ V A+L+ CA G L+ G +H I+
Sbjct: 369 MISGY-EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
R++ +V LI MY+K C++K+L++F+ + K+ SWTSII GL +N + +AL
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFL 487
Query: 120 EAMEKLGAKPD 130
M K+ +P+
Sbjct: 488 RQM-KMTLQPN 497
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 115/299 (38%), Gaps = 42/299 (14%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRI 61
++G + +EA+ L MQ V D+ + VAL+ C A E G ++ + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 62 MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEA 121
+ +G A + M+ + G + + VF + E++ SW ++ G A G ++A+ L+
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 122 MEKL-GAKPDDVTFITVLSACS-----------------------------------HAG 145
M + G KPD TF VL C G
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 146 LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLY 205
V+ R LF M + I N G F G+ HE EL + + + +
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYF-----ENGMCHEGLELFFAMRGLSVDPDLMTL 300
Query: 206 GALLSACRTYGNIDMGERL-ATTLXXXXXXXXXXXXXXXXIYASADRWEDVNKVRSKMK 263
+++SAC G+ +G + A + +Y +A W + K+ S+M+
Sbjct: 301 TSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 149/278 (53%), Gaps = 9/278 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G ++ + EA L +P+ ++ + L GC+ + L G+ IH + N
Sbjct: 257 LISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNG 311
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D+ + L++MY K G + ++ +F + K SWTS+I A+NG KALE+F
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFR 371
Query: 121 AM--EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
M E G P+ VTF+ V+SAC+HAGLV+EG++ F M KY + P EHY CFID+L
Sbjct: 372 EMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILS 431
Query: 179 RAGLLHEAEELVMKLPDQTDE-IIVPLYGALLSACRTYGNIDMGERLATTLXXXX-XXXX 236
+AG E LV ++ + ++ I ++ A+LSAC ++ GE +A L
Sbjct: 432 KAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENA 491
Query: 237 XXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYS 274
YA+ +W+ V ++R K+K+ G+ K G+S
Sbjct: 492 SIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 105/204 (51%), Gaps = 11/204 (5%)
Query: 12 DEAIALFGDMQVRGVKPD--KFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
++ +ALF +Q+ PD +L C+ E GR +H +I+ T+ T
Sbjct: 66 NDTLALF--LQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKT 123
Query: 70 ALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKP 129
ALI+MY+K G + S+ VF ++EKD SW +++ G NGK +AL +F AM + +
Sbjct: 124 ALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI 183
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYG-CFIDLLGRAGLLHEAEE 188
+ T +V+ C+ ++++G+++ H+M +L G I GL++EA +
Sbjct: 184 SEFTLSSVVKTCASLKILQQGKQV-HAMV--VVTGRDLVVLGTAMISFYSSVGLINEAMK 240
Query: 189 LVMKLPDQTDEIIVPLYGALLSAC 212
+ L TDE+++ +L+S C
Sbjct: 241 VYNSLNVHTDEVML---NSLISGC 261
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 96/199 (48%), Gaps = 10/199 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHD-YVIEN 59
+++G+++ + EA+ +F M V+ +F + +++ CA L+ G+ +H V+
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALEL 118
R +V V+GTA+I Y+ G + ++++V+N L D S+I G N +A L
Sbjct: 216 RDLV--VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLL 273
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+P+ + L+ CS + G+++ H ++ + + + +D+ G
Sbjct: 274 MSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQI-HCVALRNGFVSDSKLCNGLMDMYG 327
Query: 179 RAGLLHEAEELVMKLPDQT 197
+ G + +A + +P ++
Sbjct: 328 KCGQIVQARTIFRAIPSKS 346
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 142/252 (56%), Gaps = 4/252 (1%)
Query: 28 PDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEV 87
PD ++V++L C+ +E G+ IH + + I++D + TA ++MY+K G VE + +
Sbjct: 391 PDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERI 450
Query: 88 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLV 147
F+ E+DT + ++I G A +G K+ + FE M + G KPD++TF+ +LSAC H GLV
Sbjct: 451 FDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLV 510
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGA 207
EG K F SM Y+I P HY C IDL G+A L +A EL M+ DQ ++ V L GA
Sbjct: 511 LEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIEL-MEGIDQVEKDAVIL-GA 568
Query: 208 LLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADRWEDVNKVRSKM--KDL 265
L+AC N ++ + + L YAS+ RW+++ ++R +M K+L
Sbjct: 569 FLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKEL 628
Query: 266 GIKKVPGYSSID 277
I +++ID
Sbjct: 629 EIFSGCSWANID 640
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 111/249 (44%), Gaps = 37/249 (14%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY Q +EA+ + M+ G+K D+ A+L + +L+ G+ +H V++N
Sbjct: 231 LIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG 290
Query: 61 IMVDTVVGTALIEMYAKSGCVE-------------------------------KSLEVFN 89
+ V + ++++Y K G ++ ++ +F+
Sbjct: 291 SYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFD 350
Query: 90 GLKEKDTASWTSIICGLAMNGKTNKALELFEA-MEKLGAKPDDVTFITVLSACSHAGLVE 148
L EK+ WT++ G + + LEL A + PD + ++VL ACS +E
Sbjct: 351 SLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYME 410
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGAL 208
G+++ H S + I + + F+D+ + G + AE ++ D + E +Y A+
Sbjct: 411 PGKEI-HGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAE----RIFDSSFERDTVMYNAM 465
Query: 209 LSACRTYGN 217
++ C +G+
Sbjct: 466 IAGCAHHGH 474
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 62 MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE-KDTASWTSIICGLAMNGKTNKALELFE 120
VD+V A+I Y + G ++K+L VF E DT SW ++I G A NG +AL++
Sbjct: 190 FVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAV 249
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+ME+ G K D+ +F VL+ S ++ G+++
Sbjct: 250 SMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEV 282
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 149/282 (52%), Gaps = 5/282 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ R +E L +M + G P+ + ++L A+ G L+HG+ H Y++ +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 61 IMVDTVV-GTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D ++ +L++MYAKSG + + VF+ ++++D ++TS+I G GK AL F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M++ G KPD VT + VLSACSH+ LV EG LF M + I+ LEHY C +DL R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXX-X 238
AG L +A ++ +P + + LL AC +GN ++GE A L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMC---ATLLKACLIHGNTNIGEWAADKLLLETKPEHLGH 630
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+YA W + V++ + DLG++K ++ ++ +
Sbjct: 631 YMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDS 672
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I Y++ RF E+++++ M +G++ D+F +++ CA +GR +H + +
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V ALI MY + G V+ + +F+ + E+D SW +II K +A +L +
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 121 AMEKLGAKPDDVTFITVLSACSHAG 145
M G + VT+ T+ C AG
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 37 LTGCAQSGALEHGRWIHDYVIENRIMVDTV--VGTALIEMYAKSGCVEKSLEVFNGLKEK 94
L C+ GAL+ G+ H VI + + V +LI MY++ + + VF ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 95 DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF 154
++W SII G A N ++ + L + M G P+ +T ++L + G ++ G++
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 155 HSMSSKYHIKPNLEHYGCFIDLLGRAG 181
+ + K L + +D+ ++G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSG 473
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 156 bits (395), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 149/282 (52%), Gaps = 5/282 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ R +E L +M + G P+ + ++L A+ G L+HG+ H Y++ +
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 61 IMVDTVV-GTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D ++ +L++MYAKSG + + VF+ ++++D ++TS+I G GK AL F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M++ G KPD VT + VLSACSH+ LV EG LF M + I+ LEHY C +DL R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXX-X 238
AG L +A ++ +P + + LL AC +GN ++GE A L
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMC---ATLLKACLIHGNTNIGEWAADKLLLETKPEHLGH 630
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+YA W + V++ + DLG++K ++ ++ +
Sbjct: 631 YMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALMETDS 672
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I Y++ RF E+++++ M +G++ D+F +++ CA +GR +H + +
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V ALI MY + G V+ + +F+ + E+D SW +II K +A +L +
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 121 AMEKLGAKPDDVTFITVLSACSHAG 145
M G + VT+ T+ C AG
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAG 299
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 37 LTGCAQSGALEHGRWIHDYVIENRIMVDTV--VGTALIEMYAKSGCVEKSLEVFNGLKEK 94
L C+ GAL+ G+ H VI + + V +LI MY++ + + VF ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 95 DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF 154
++W SII G A N ++ + L + M G P+ +T ++L + G ++ G++
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 155 HSMSSKYHIKPNLEHYGCFIDLLGRAG 181
+ + K L + +D+ ++G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSG 473
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 122/199 (61%), Gaps = 1/199 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI YV+ R DEA LF MQV VKP++F +V LL Q G+L GRW+HDY +N
Sbjct: 222 MITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNG 281
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++D +GTALI+MY+K G ++ + +VF+ ++ K A+W S+I L ++G +AL LFE
Sbjct: 282 FVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFE 341
Query: 121 AMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
ME+ + +PD +TF+ VLSAC++ G V++G + F M Y I P EH C I LL +
Sbjct: 342 EMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQ 401
Query: 180 AGLLHEAEELVMKLPDQTD 198
A + +A LV + D
Sbjct: 402 ALEVEKASNLVESMDSDPD 420
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 84/209 (40%), Gaps = 33/209 (15%)
Query: 13 EAIALFGDMQV-RGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
EA+ LF M + + DKF ++ C S ++ G +H I+ D L
Sbjct: 101 EALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTL 160
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNG--------------------- 110
+++Y K G + +VF+ + + SWT+++ GL N
Sbjct: 161 MDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWT 220
Query: 111 ----------KTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
+ ++A +LF M+ KP++ T + +L A + G + GR + H + K
Sbjct: 221 AMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWV-HDYAHK 279
Query: 161 YHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
+ ID+ + G L +A ++
Sbjct: 280 NGFVLDCFLGTALIDMYSKCGSLQDARKV 308
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 149/284 (52%), Gaps = 3/284 (1%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
+E + L M+ GV D+F L+ A+ LE G+ +H ++ D+ + A
Sbjct: 530 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 589
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
+MY+K G + + +++ + SW +I L +G + F M ++G KP
Sbjct: 590 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 649
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
VTF+++L+ACSH GLV++G + ++ + ++P +EH C IDLLGR+G L EAE +
Sbjct: 650 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 709
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADR 251
K+P + ++++ + +LL++C+ +GN+D G + A L ++A+ R
Sbjct: 710 KMPMKPNDLV---WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 766
Query: 252 WEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLT 295
WEDV VR +M IKK S + L+ +S G+G +H T
Sbjct: 767 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 810
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSG-ALEHGRWIHDYVIEN 59
+I GY + D+A+A F M+V GV + VV++L+ C G LE G+ +H Y++
Sbjct: 417 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 476
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D V +LI MYAK G + S ++FNGL ++ +W +++ A +G + L+L
Sbjct: 477 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 536
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G D +F LSA + ++EEG++L H ++ K + + + D+ +
Sbjct: 537 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYSK 595
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
G E E+V LP + + P + L+SA +G
Sbjct: 596 CG---EIGEVVKMLPPSVNRSL-PSWNILISALGRHG 628
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 119/232 (51%), Gaps = 12/232 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGAL-EHGRWIHDYVIEN 59
M++G V+ + E + F M G+KP F++ +L+T C +SG++ G +H +V ++
Sbjct: 12 MMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS 71
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
++ D V TA++ +Y G V S +VF + +++ SWTS++ G + G+ + ++++
Sbjct: 72 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 131
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEE---GRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+ M G ++ + V+S+C GL+++ GR++ + K ++ L I +
Sbjct: 132 KGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQV-VKSGLESKLAVENSLISM 187
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
LG G + A + DQ E + ++ +A G+I+ R+ + +
Sbjct: 188 LGSMGNVDYANYIF----DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 16/223 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ +V R +A+ L M G + + L C E GR +H V+ +
Sbjct: 316 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 375
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + ++G AL+ MY K G + +S V + +D +W ++I G A + +KAL F+
Sbjct: 376 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 435
Query: 121 AMEKLGAKPDDVTFITVLSACSHAG-LVEEGRKLFHSM-----SSKYHIKPNLEHYGCFI 174
M G + +T ++VLSAC G L+E G+ L + S H+K +L I
Sbjct: 436 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSL------I 489
Query: 175 DLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGN 217
+ + G L +++L L ++ + + A+L+A +G+
Sbjct: 490 TMYAKCGDLSSSQDLFNGLDNRN----IITWNAMLAANAHHGH 528
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Query: 4 GYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMV 63
Y Q +E+ +F M+ + + V LL+ + GR IH V++
Sbjct: 218 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 277
Query: 64 DTVVGTALIEMYAKSG-CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 122
V L+ MYA +G VE +L VF + KD SW S++ +G++ AL L +M
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANL-VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 336
Query: 123 EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGL 182
G + VTF + L+AC E+GR + H + + N + + G+ G
Sbjct: 337 ISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGE 395
Query: 183 LHEAEELVMKLPDQ 196
+ E+ +++++P +
Sbjct: 396 MSESRRVLLQMPRR 409
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ GY +E I ++ M+ GV ++ + +++ C GR I V+++
Sbjct: 114 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 173
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +LI M G V+ + +F+ + E+DT SW SI A NG ++ +F
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGR 151
M + + + T T+LS H + GR
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 149/284 (52%), Gaps = 3/284 (1%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
+E + L M+ GV D+F L+ A+ LE G+ +H ++ D+ + A
Sbjct: 547 EEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAA 606
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
+MY+K G + + +++ + SW +I L +G + F M ++G KP
Sbjct: 607 ADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGH 666
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
VTF+++L+ACSH GLV++G + ++ + ++P +EH C IDLLGR+G L EAE +
Sbjct: 667 VTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFIS 726
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADR 251
K+P + ++++ + +LL++C+ +GN+D G + A L ++A+ R
Sbjct: 727 KMPMKPNDLV---WRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGR 783
Query: 252 WEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLT 295
WEDV VR +M IKK S + L+ +S G+G +H T
Sbjct: 784 WEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 827
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSG-ALEHGRWIHDYVIEN 59
+I GY + D+A+A F M+V GV + VV++L+ C G LE G+ +H Y++
Sbjct: 434 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 493
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D V +LI MYAK G + S ++FNGL ++ +W +++ A +G + L+L
Sbjct: 494 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 553
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G D +F LSA + ++EEG++L H ++ K + + + D+ +
Sbjct: 554 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQL-HGLAVKLGFEHDSFIFNAAADMYSK 612
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
G E E+V LP + + P + L+SA +G
Sbjct: 613 CG---EIGEVVKMLPPSVNRSL-PSWNILISALGRHG 645
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 119/232 (51%), Gaps = 12/232 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGAL-EHGRWIHDYVIEN 59
M++G V+ + E + F M G+KP F++ +L+T C +SG++ G +H +V ++
Sbjct: 29 MMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS 88
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
++ D V TA++ +Y G V S +VF + +++ SWTS++ G + G+ + ++++
Sbjct: 89 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 148
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEE---GRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+ M G ++ + V+S+C GL+++ GR++ + K ++ L I +
Sbjct: 149 KGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQV-VKSGLESKLAVENSLISM 204
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
LG G + A + DQ E + ++ +A G+I+ R+ + +
Sbjct: 205 LGSMGNVDYANYIF----DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 252
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 104/223 (46%), Gaps = 16/223 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ +V R +A+ L M G + + L C E GR +H V+ +
Sbjct: 333 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 392
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + ++G AL+ MY K G + +S V + +D +W ++I G A + +KAL F+
Sbjct: 393 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 452
Query: 121 AMEKLGAKPDDVTFITVLSACSHAG-LVEEGRKLFHSM-----SSKYHIKPNLEHYGCFI 174
M G + +T ++VLSAC G L+E G+ L + S H+K +L I
Sbjct: 453 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSL------I 506
Query: 175 DLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGN 217
+ + G L +++L L ++ + + A+L+A +G+
Sbjct: 507 TMYAKCGDLSSSQDLFNGLDNRN----IITWNAMLAANAHHGH 545
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 3/194 (1%)
Query: 4 GYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMV 63
Y Q +E+ +F M+ + + V LL+ + GR IH V++
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDS 294
Query: 64 DTVVGTALIEMYAKSG-CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM 122
V L+ MYA +G VE +L VF + KD SW S++ +G++ AL L +M
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANL-VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSM 353
Query: 123 EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGL 182
G + VTF + L+AC E+GR + H + + N + + G+ G
Sbjct: 354 ISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGE 412
Query: 183 LHEAEELVMKLPDQ 196
+ E+ +++++P +
Sbjct: 413 MSESRRVLLQMPRR 426
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 69/151 (45%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ GY +E I ++ M+ GV ++ + +++ C GR I V+++
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 190
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +LI M G V+ + +F+ + E+DT SW SI A NG ++ +F
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 250
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGR 151
M + + + T T+LS H + GR
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 281
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
Query: 74 MYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVT 133
MY K G V+ + +F+ + ++ SW +++ G+ G + +E F M LG KP
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 134 FITVLSACSHAG-LVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMK 192
++++AC +G + EG ++ H +K + ++ + L G GL+ + ++ +
Sbjct: 61 IASLVTACGRSGSMFREGVQV-HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 193 LPDQT 197
+PD+
Sbjct: 120 MPDRN 124
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/297 (32%), Positives = 156/297 (52%), Gaps = 10/297 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI GYV+ +EA+ +F M G VKP+ V++L+ C+ L G+ IH + ++
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVF-NGLK-EKDTASWTSIICGLAMNGKTNKALE 117
+ +V +AL+ MY+KSG + + ++F NGL ++D SW S+I A +G +A+E
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
++ M K G KP VT++ +L ACSHAGLVE+G + F + + EHY C +DL
Sbjct: 421 MYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLC 480
Query: 178 GRAGLLHEAEELVMKLPDQTDE--IIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXX 235
GRAG L + + D+ + YGA+LSAC + + + + + +
Sbjct: 481 GRAGRLKDVTNFI-----NCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDD 535
Query: 236 XXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSH 292
IYA+ + E+ ++R KMK+ G+KK PG S + + + VG SH
Sbjct: 536 AGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSH 592
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 112/230 (48%), Gaps = 28/230 (12%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ VQ R DEA+ LF M R V A++ G A++G ++ R + D + E
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I + A+I YA++ ++++ ++F + E+D ASW ++I G N + NKA LF+
Sbjct: 233 I----ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFD 288
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR- 179
M + +++ T+++ EE +F M +KPN+ G ++ +L
Sbjct: 289 RMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNV---GTYVSILSAC 341
Query: 180 ---AGLL--HEAEELVMKLPDQTDEIIVP----LY---GALLSACRTYGN 217
AGL+ + +L+ K Q +EI+ +Y G L++A + + N
Sbjct: 342 SDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN 391
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 97/196 (49%), Gaps = 16/196 (8%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY++ EA LF + R + A+++G +S L I + + +
Sbjct: 83 VITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGYLRSKQLS----IAEMLFQEM 135
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +I+ YA+SG ++K+LE+F+ + E++ SW S++ L G+ ++A+ LFE
Sbjct: 136 PERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFE 195
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + D V++ ++ + G V+E R+LF M + N+ + I +
Sbjct: 196 RM----PRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPER-----NIISWNAMITGYAQN 246
Query: 181 GLLHEAEELVMKLPDQ 196
+ EA++L +P++
Sbjct: 247 NRIDEADQLFQVMPER 262
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 73/149 (48%), Gaps = 12/149 (8%)
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
LI K G + ++ ++F+GL E+D +WT +I G G +A ELF +++ ++ +
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELF---DRVDSRKN 108
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELV 190
VT+ ++S + + LF M + N+ + ID ++G + +A EL
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPER-----NVVSWNTMIDGYAQSGRIDKALELF 163
Query: 191 MKLPDQTDEIIVPLYGALLSACRTYGNID 219
++P++ + + +++ A G ID
Sbjct: 164 DEMPERN----IVSWNSMVKALVQRGRID 188
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 147/278 (52%), Gaps = 3/278 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY +EA+ L DM+ GV D+F + ++ + LE + H +I N
Sbjct: 296 VIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG 355
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V TAL++ Y+K G V+ + VF+ L K+ SW +++ G A +G+ A++LFE
Sbjct: 356 FESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFE 415
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M P+ VTF+ VLSAC+++GL E+G ++F SMS + IKP HY C I+LLGR
Sbjct: 416 KMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRD 475
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GLL EA + + P +T V ++ ALL+ACR N+++G +A L
Sbjct: 476 GLLDEAIAFIRRAPLKT---TVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYV 532
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDL 278
+Y S + + V ++ G+ +P + +++
Sbjct: 533 VMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEV 570
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 1/197 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+V F + EA LF M + +L A G++ G+ +H ++
Sbjct: 195 IISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLG 254
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ +T V LI+MY+K G +E + F + EK T +W ++I G A++G + +AL L
Sbjct: 255 VVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLY 314
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G D T ++ + +E ++ H+ + + + +D +
Sbjct: 315 DMRDSGVSIDQFTLSIMIRISTKLAKLELTKQA-HASLIRNGFESEIVANTALVDFYSKW 373
Query: 181 GLLHEAEELVMKLPDQT 197
G + A + KLP +
Sbjct: 374 GRVDTARYVFDKLPRKN 390
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 2/197 (1%)
Query: 2 INGYVQFNRFDEAIALFGDMQVR-GVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
I V NRF EA LF +++R K AL+ C + ++ + ++ +++ N
Sbjct: 94 IEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNG 153
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + ++ M+ K G + + +F+ + E++ S+ SII G G +A ELF+
Sbjct: 154 FEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M + + + TF +L A + G + G++L H + K + N ID+ +
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQL-HVCALKLGVVDNTFVSCGLIDMYSKC 272
Query: 181 GLLHEAEELVMKLPDQT 197
G + +A +P++T
Sbjct: 273 GDIEDARCAFECMPEKT 289
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 150 bits (380), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 145/281 (51%), Gaps = 5/281 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y ++A+ LF + V+PDKF ++L+ + L+HG +H VI+
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLG 365
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF- 119
+DT V T+L+EMY K+G V+ ++ VF KD W ++I GLA N + ++L +F
Sbjct: 366 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 425
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ + KPD VT + +L AC +AG V EG ++F SM + + P EHY C I+LL R
Sbjct: 426 QLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCR 485
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXX 239
G+++EA+++ K+P + I + +L A G+ + E +A T+
Sbjct: 486 VGMINEAKDIADKIPFEPSSHI---WEPILCASLDLGDTRLAETVAKTMLESEPKSSFPY 542
Query: 240 XXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
IY RWE+ K+R M + +K G S I +E
Sbjct: 543 LVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIES 583
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFI--VVALLTGCAQSGALEHGRWIHDYVIE 58
MI+G V + I +F DMQ ++P +F ++A L C + G HG I V
Sbjct: 107 MISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSR 166
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ VV ++++MY + G + +L VF ++++D SW +I + +G AL+
Sbjct: 167 YNL----VVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQ 222
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F M ++ +PD+ T V+S CS + +G++ ++ K N G ID+
Sbjct: 223 FWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL-ALCIKMGFLSNSIVLGAGIDMFS 281
Query: 179 RAGLLHEAEELVMKL 193
+ L ++ +L +L
Sbjct: 282 KCNRLDDSVKLFREL 296
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 52 IHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGK 111
+H ++E + T G +++Y KSG V +L++F+ + +K+T +W + GL NG
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 112 TNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKP 165
N AL+LF+ M + D V++ T++S G E G ++F M ++ I+P
Sbjct: 86 LNNALDLFDEM----PERDVVSWNTMISGLVSCGFHEYGIRVFFDM-QRWEIRP 134
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAME 123
+T+ ++ K+G + +L++F+ + E+D SW ++I GL G + +F M+
Sbjct: 69 NTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQ 128
Query: 124 KLGAKPDDVTF--ITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAG 181
+ +P + TF + L C G G + +S + NL + +D+ R G
Sbjct: 129 RWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVS-----RYNLVVWNSVMDMYRRLG 183
Query: 182 LLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGN 217
+ A + + + D+ V + L+ +C GN
Sbjct: 184 VFDYALSVFLTMEDRD----VVSWNCLILSCSDSGN 215
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 139/268 (51%), Gaps = 7/268 (2%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
E LF ++++ +P++ V LL+ Q G+ +G H ++I + V AL+
Sbjct: 665 EVFQLFRNLKL---EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALV 721
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGA-KPDD 131
+MY+ G +E ++VF ++W S+I +G KA+ELF+ + +P+
Sbjct: 722 DMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNK 781
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
+FI++LSACSH+G ++EG + M K+ +KP EH +D+LGRAG L EA E +
Sbjct: 782 SSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFIT 841
Query: 192 KLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASADR 251
+ + ++GALLSAC +G+ +G+ +A L Y
Sbjct: 842 GIGEPQK---AGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGG 898
Query: 252 WEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
WE+ ++R ++D +KK+PGYS ID+
Sbjct: 899 WEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQ-VRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
++NG+ F+EA + MQ V ++PD VV++ + C GR +H Y +
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRM 422
Query: 60 RIMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ + V ++I+MY K G ++ +F +D SW S+I + NG T+KA L
Sbjct: 423 EMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNL 482
Query: 119 FEAM--EKLGAKPDDVTFITVLSAC 141
F+ + E +K T + +L++C
Sbjct: 483 FKEVVSEYSCSKFSLSTVLAILTSC 507
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVD--TVVGTA 70
+++ F M G + D +++ C+ L G +H VI++ + VG +
Sbjct: 272 KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNS 331
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGA-KP 129
+I MY+K G E + VF L +D S +I+ G A NG +A + M+ + +P
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPN-LEHYGCFIDLLGRAGLLHEAEE 188
D T +++ S C EGR + H + + ++ LE ID+ G+ GL +A E
Sbjct: 392 DIATVVSITSICGDLSFSREGRAV-HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-E 449
Query: 189 LVMKLPDQTD 198
L+ K D
Sbjct: 450 LLFKTTTHRD 459
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Q R+ A+ LF +M +G + D ++ + + +H IE
Sbjct: 159 MITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETG 218
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++ D+ + AL+ +YAK + + VF ++ +D SW +I+ NG K+L+ F+
Sbjct: 219 LVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFK 278
Query: 121 AMEKLGAKPDDVTFITVLSACS 142
+M G + D VTF V+SACS
Sbjct: 279 SMTGSGQEADTVTFSCVISACS 300
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 101/225 (44%), Gaps = 14/225 (6%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+G E++ F M G ++ D ++ ++ G + GR H I++
Sbjct: 551 VISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKS 610
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+DT + LI MY + +E +++VF + + + SW +I L+ N E+F
Sbjct: 611 LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN---KAGREVF 667
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF-HSMSSKYHIKPNLEHYGCFIDLLG 178
+ L +P+++TF+ +LSA + G G + H + + P + +D+
Sbjct: 668 QLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYS 725
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGER 223
G+L E MK+ + + + +++SA +G MGE+
Sbjct: 726 SCGML----ETGMKVFRNSGVNSISAWNSVISA---HGFHGMGEK 763
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKF---IVVALLTGCAQSGALEHGRWIHDYVI 57
MI+ + Q +A LF ++ V KF V+A+LT C S +L G+ +H ++
Sbjct: 466 MISAFSQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWL- 523
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ + D +E +++ +D SW S+I G A +G ++L
Sbjct: 524 --QKLGDLTSAFLRLETMSET---------------RDLTSWNSVISGCASSGHHLESLR 566
Query: 118 LFEAMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
F+AM + G + D +T + +SA + GLV +GR FH ++ K + + + I +
Sbjct: 567 AFQAMSREGKIRHDLITLLGTISASGNLGLVLQGR-CFHGLAIKSLRELDTQLQNTLITM 625
Query: 177 LGRA 180
GR
Sbjct: 626 YGRC 629
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRI-MVDTVVGTA 70
+E I LF M ++PDK+ V++L+ C++ L G IH + + DT V
Sbjct: 527 EEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNV 586
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
LI+MY K G + ++VF +EK+ +WT++I L ++G +ALE F+ LG KPD
Sbjct: 587 LIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPD 646
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELV 190
V+FI++L+AC H G+V+EG LF M Y ++P ++HY C +DLL R G L EAE L+
Sbjct: 647 RVSFISILTACRHGGMVKEGMGLFQKMKD-YGVEPEMDHYRCAVDLLARNGYLKEAEHLI 705
Query: 191 MKLPDQTDEIIVPLYGALLSACRTYG 216
++P D P++ L C +
Sbjct: 706 REMPFPAD---APVWRTFLDGCNRFA 728
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 89/190 (46%), Gaps = 4/190 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE-N 59
+I GY ++ D+A +F +M+ G P++ V LL+ CA S + G +H ++
Sbjct: 86 IIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CA-SLDVRAGTQLHGLSLKYG 143
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
M D VGT L+ +Y + +E + +VF + K +W ++ L G + + F
Sbjct: 144 LFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFF 203
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ ++GA + +F+ VL S ++ ++L H ++K + + I G+
Sbjct: 204 RELVRMGASLTESSFLGVLKGVSCVKDLDISKQL-HCSATKKGLDCEISVVNSLISAYGK 262
Query: 180 AGLLHEAEEL 189
G H AE +
Sbjct: 263 CGNTHMAERM 272
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 106/233 (45%), Gaps = 36/233 (15%)
Query: 14 AIALFGDMQVRGVKPDKFIVVALLTGCA-------QSGALEHGRWIHDYVI--------E 58
++LF M G +P ++ L C S + G +DYV+ +
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK 459
Query: 59 NRIMVDTVV-------GTALIEM------YAKSGCVEKSLEVFNGLKEKDTASWTSIICG 105
N++M D ++ T+++ + Y++ G +S+++ + L++ DT SW I
Sbjct: 460 NQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAA 519
Query: 106 LAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKP 165
+ + + +ELF+ M + +PD TF+++LS CS + G + H + +K
Sbjct: 520 CSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSI-HGLITKTDFSC 578
Query: 166 NLEHYGC--FIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
+ + C ID+ G+ G + VMK+ ++T E + + AL+S +G
Sbjct: 579 A-DTFVCNVLIDMYGKCGSIRS----VMKVFEETREKNLITWTALISCLGIHG 626
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 88/207 (42%), Gaps = 8/207 (3%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
E + F ++ G + + +L G + L+ + +H + + + V +LI
Sbjct: 198 ECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLI 257
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
Y K G + +F D SW +IIC A + KAL+LF +M + G P+
Sbjct: 258 SAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQG 317
Query: 133 TFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMK 192
T+++VL S L+ GR++ H M K + + ID + G L ++
Sbjct: 318 TYVSVLGVSSLVQLLSCGRQI-HGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDY 376
Query: 193 LPDQTDEIIVPLYGALLSACRTYGNID 219
+ D+ + + ALLS Y N D
Sbjct: 377 IRDKN----IVCWNALLSG---YANKD 396
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 33 VVALLTGCAQSGALEHGRWIHDYVIE--NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNG 90
VV+LL C ++ + + +H I + ++ V +I +Y K G V + +VF+
Sbjct: 15 VVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ 74
Query: 91 LKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEG 150
+ E++ S+ +II G + G +KA +F M G P+ T +LS S V G
Sbjct: 75 MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAG 132
Query: 151 RKLFHSMSSKYHIKPNLEHYG-CFIDLLGRAGLLHEAEELVMKLPDQTDE 199
+L H +S KY + G C + L GR LL AE++ +P ++ E
Sbjct: 133 TQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLE 181
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 16/289 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVK-PDKFIVVALLTGCAQSGALEHGRWIHDYVIE- 58
+I G+ Q R +EA+ F DM GV P++ +T + + G+ IH I+
Sbjct: 196 VIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKF 255
Query: 59 --NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE--KDTASWTSIICGLAMNGKTNK 114
R V V +LI Y+K G +E SL FN L+E ++ SW S+I G A NG+ +
Sbjct: 256 LGKRFNV--FVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEE 313
Query: 115 ALELFEAMEK-LGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNL---EHY 170
A+ +FE M K +P++VT + VL AC+HAGL++EG F+ + Y PNL EHY
Sbjct: 314 AVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHY 372
Query: 171 GCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXX 230
C +D+L R+G EAEEL+ +P + + ALL C+ + N + + A+ +
Sbjct: 373 ACMVDMLSRSGRFKEAEELIKSMPLDPG---IGFWKALLGGCQIHSNKRLAKLAASKILE 429
Query: 231 XXXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLE 279
Y++ + W++V+ +R KMK+ G+K+ G S I++
Sbjct: 430 LDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVR 478
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 4/174 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I +V+ +R EA F + G++P++F ++ S ++ G+ +H Y ++
Sbjct: 64 VIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMG 123
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VG+A++ Y K + + F+ ++ + S T++I G + +AL LF
Sbjct: 124 LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFR 183
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFI 174
AM + VT+ V+ S G EE F M + + PN + C I
Sbjct: 184 AMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAI 233
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/283 (32%), Positives = 143/283 (50%), Gaps = 9/283 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY+Q + DEA+ LF MQ P+ +++LL CA + R IH V+
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V AL + YAKSG +E S +F G++ KD +W S+I G ++G AL LF
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ G P+ T +++ A G V+EG+K+F+S+++ YHI P LEH + L GRA
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRA 674
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
L EA + + ++ Q++ P++ + L+ CR +G+IDM A L
Sbjct: 675 NRLEEALQFIQEMNIQSE---TPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATES 731
Query: 241 XXXXIY---ASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
IY A R + NK R +D +KK G S I++
Sbjct: 732 IVSQIYALGAKLGRSLEGNKPR---RDNLLKKPLGQSWIEVRN 771
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 138/303 (45%), Gaps = 18/303 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI Y + NR+ E LF M GV PD F+ +L GCA G +E G+ IH VI+
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLG 211
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +++ +YAK G ++ + + F ++E+D +W S++ NGK +A+EL +
Sbjct: 212 MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
MEK G P VT+ ++ + G + L M + + I ++ + I L
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHN 330
Query: 181 GLLHEAEELVMKL------PDQTDEIIVPLYGALLSACRTYGNIDMGERL-ATTLXXXXX 233
G+ ++A ++ K+ P+ V + A +SAC I+ G + + +
Sbjct: 331 GMRYQALDMFRKMFLAGVVPNA-----VTIMSA-VSACSCLKVINQGSEVHSIAVKMGFI 384
Query: 234 XXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHS 293
+Y+ + ED KV +K+ K V ++S+ + GY +G G
Sbjct: 385 DDVLVGNSLVDMYSKCGKLEDARKVFDSVKN---KDVYTWNSM-ITGYCQAGYCGKAYEL 440
Query: 294 LTK 296
T+
Sbjct: 441 FTR 443
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G + +A+ +F M + GV P+ +++ ++ C+ + G +H ++
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D +VG +L++MY+K G +E + +VF+ +K KD +W S+I G G KA ELF
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M+ +P+ +T+ T++S G E LF M ++ N + I +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 181 GLLHEAEELVMKL 193
G EA EL K+
Sbjct: 503 GKKDEALELFRKM 515
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 94/195 (48%), Gaps = 13/195 (6%)
Query: 24 RGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMV----DTVVGTALIEMYAKSG 79
+G K + + LL C SG++ GR +H R + D V T L+ MYAK G
Sbjct: 75 QGSKVKRSTYLKLLESCIDSGSIHLGRILH-----ARFGLFTEPDVFVETKLLSMYAKCG 129
Query: 80 CVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLS 139
C+ + +VF+ ++E++ +W+++I + + + +LF M K G PDD F +L
Sbjct: 130 CIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQ 189
Query: 140 ACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDE 199
C++ G VE G K+ HS+ K + L + + + G L A + ++ ++
Sbjct: 190 GCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD-- 246
Query: 200 IIVPLYGALLSACRT 214
++ LL+ C+
Sbjct: 247 -VIAWNSVLLAYCQN 260
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++ Y + + ++A +F ++ + D + +++TG Q+G + + +
Sbjct: 393 LVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDAN 448
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVF-----NGLKEKDTASWTSIICGLAMNGKTNKA 115
+ + + +I Y K+G +++++F +G +++TA+W II G NGK ++A
Sbjct: 449 LRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEA 508
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSH---AGLVEE 149
LELF M+ P+ VT +++L AC++ A +V E
Sbjct: 509 LELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 120/197 (60%), Gaps = 3/197 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G+ Q EA+ LFG M + ++PD+ ++L+ CA+ A+ + + V +
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG 372
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V +LI Y+++G + ++L F+ ++E D SWTS+I LA +G ++L++FE
Sbjct: 373 SADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFE 432
Query: 121 AM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+M +KL +PD +TF+ VLSACSH GLV+EG + F M+ Y I+ EHY C IDLLGR
Sbjct: 433 SMLQKL--QPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGR 490
Query: 180 AGLLHEAEELVMKLPDQ 196
AG + EA +++ +P +
Sbjct: 491 AGFIDEASDVLNSMPTE 507
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 1 MINGYVQFNRFDEAIALFGDM-----QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDY 55
+++ YV DEA L M + RG D F +LL+ C +E G+ IH
Sbjct: 214 LVSSYVLNGMIDEAFGLLKLMGSDKNRFRG---DYFTFSSLLSACR----IEQGKQIHAI 266
Query: 56 VIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKA 115
+ + D V TAL+ MYAKS + + E F + ++ SW ++I G A NG+ +A
Sbjct: 267 LFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREA 326
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
+ LF M +PD++TF +VLS+C+ + E +++ +M +K L I
Sbjct: 327 MRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV-QAMVTKKGSADFLSVANSLIS 385
Query: 176 LLGRAGLLHEA 186
R G L EA
Sbjct: 386 SYSRNGNLSEA 396
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/226 (19%), Positives = 94/226 (41%), Gaps = 43/226 (19%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG----------------------------------- 25
++ Y + FD+A LF +M +R
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFT 136
Query: 26 -VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKS 84
V D + L+ C S ++ G +H +++ + T+L+ Y K G + ++
Sbjct: 137 DVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEA 196
Query: 85 LEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM--EKLGAKPDDVTFITVLSACS 142
VF + ++D W +++ +NG ++A L + M +K + D TF ++LSAC
Sbjct: 197 RRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR 256
Query: 143 HAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEE 188
+E+G+++ H++ K + ++ +++ ++ L +A E
Sbjct: 257 ----IEQGKQI-HAILFKVSYQFDIPVATALLNMYAKSNHLSDARE 297
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 144 bits (363), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 145/280 (51%), Gaps = 3/280 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ + + + + A+++ M G++ D+ + ++ A GALE G+ +H Y +++
Sbjct: 499 LVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSG 558
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V +L++MY+K G +E + +VF + D SW ++ GLA NG + AL FE
Sbjct: 559 FSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFE 618
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M +PD VTF+ +LSACS+ L + G + F M Y+I+P +EHY + +LGRA
Sbjct: 619 EMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRA 678
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G L EA +V + + + +I + LL ACR GN+ +GE +A
Sbjct: 679 GRLEEATGVVETMHLKPNAMI---FKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYI 735
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+Y + + E K R+ M + + K G S+++++G
Sbjct: 736 LLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQG 775
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 87/156 (55%), Gaps = 2/156 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ + + F A++LF +M G P++F +++ CA + +G +H VI+
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG 154
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
++VVG++L ++Y+K G +++ E+F+ L+ DT SWT +I L K +AL+ +
Sbjct: 155 FEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYS 214
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHS 156
M K G P++ TF+ +L A S GL E K HS
Sbjct: 215 EMVKAGVPPNEFTFVKLLGASSFLGL--EFGKTIHS 248
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 95/176 (53%), Gaps = 2/176 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ V ++ EA+ + +M GV P++F V LL G + LE G+ IH +I
Sbjct: 196 MISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLL-GASSFLGLEFGKTIHSNIIVRG 254
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I ++ V+ T+L++ Y++ +E ++ V N E+D WTS++ G N + +A+ F
Sbjct: 255 IPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFL 314
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
M LG +P++ T+ +LS CS ++ G+++ HS + K + + + +D+
Sbjct: 315 EMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQI-HSQTIKVGFEDSTDVGNALVDM 369
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++G+V+ R EA+ F +M+ G++P+ F A+L+ C+ +L+ G+ IH I+
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG 355
Query: 61 IMVDTVVGTALIEMYAKSGCVE-KSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
T VG AL++MY K E ++ VF + + SWT++I GL +G L
Sbjct: 356 FEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLL 415
Query: 120 EAMEKLGAKPDDVTFITVLSACS 142
M K +P+ VT VL ACS
Sbjct: 416 MEMVKREVEPNVVTLSGVLRACS 438
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 3/197 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G V + L +M R V+P+ + +L C++ + IH Y++
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VVG +L++ YA S V+ + V +K +D ++TS++ GK AL +
Sbjct: 458 VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVIN 517
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G + D ++ +SA ++ G +E G+ L H S K +D+ +
Sbjct: 518 YMYGDGIRMDQLSLPGFISASANLGALETGKHL-HCYSVKSGFSGAASVLNSLVDMYSKC 576
Query: 181 GLLHEAEELVMKL--PD 195
G L +A+++ ++ PD
Sbjct: 577 GSLEDAKKVFEEIATPD 593
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 2/162 (1%)
Query: 34 VALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE 93
+ +L+ C +S + G IH VI+ ++ + + L+ +Y K+ + + ++F+ +
Sbjct: 28 IRILSFC-ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSH 86
Query: 94 KDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKL 153
+ +WT +I + + AL LFE M G P++ TF +V+ +C+ + G ++
Sbjct: 87 RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRV 146
Query: 154 FHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPD 195
H K + N DL + G EA EL L +
Sbjct: 147 -HGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQN 187
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 140 bits (354), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 142/279 (50%), Gaps = 3/279 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQ--VRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE 58
MI Y Q R EAI LF + + ++F++ ++++ C+ G L+ G+ H V
Sbjct: 205 MITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTR 264
Query: 59 NRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+TVV T+L++MYAK G + + ++F ++ S+TS+I A +G A++L
Sbjct: 265 GGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKL 324
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F+ M P+ VT + VL ACSH+GLV EG + M+ KY + P+ HY C +D+LG
Sbjct: 325 FDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLG 384
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXX 238
R G + EA EL K + E L+GALLSA R +G +++ + L
Sbjct: 385 RFGRVDEAYELA-KTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSA 443
Query: 239 XXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
YA + WED +R +MK G K S I+
Sbjct: 444 YIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIE 482
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 101/198 (51%), Gaps = 6/198 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+GY + A+++F M + R V P+++ ++ C+ G+ IH + +
Sbjct: 101 VISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEIS 160
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGL--KEKDTASWTSIICGLAMNGKTNKALE 117
+ + VV ++L++MY K VE + VF+ + ++ SWTS+I A N + ++A+E
Sbjct: 161 GLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIE 220
Query: 118 LFEAMEK--LGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
LF + + + +V+SACS G ++ G K+ H + ++ + N +D
Sbjct: 221 LFRSFNAALTSDRANQFMLASVISACSSLGRLQWG-KVAHGLVTRGGYESNTVVATSLLD 279
Query: 176 LLGRAGLLHEAEELVMKL 193
+ + G L AE++ +++
Sbjct: 280 MYAKCGSLSCAEKIFLRI 297
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 102/266 (38%), Gaps = 54/266 (20%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVA---LLTGCAQSGALEHGRWIHDYVI 57
M G++Q A +LF V K D F + L+ ++S +H +
Sbjct: 1 MKKGFIQNVHLAPATSLF----VPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTL 56
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALE 117
+ DT L+ Y K + + ++F+ + E + SWTS+I G GK AL
Sbjct: 57 KLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALS 116
Query: 118 LFEAM-EKLGAKPDDVTFITVLSACS-----------HAGL------------------- 146
+F+ M E P++ TF +V ACS HA L
Sbjct: 117 MFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMY 176
Query: 147 -----VEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKL-----PDQ 196
VE R++F SM N+ + I + HEA EL D+
Sbjct: 177 GKCNDVETARRVFDSMIG---YGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDR 233
Query: 197 TDEIIVPLYGALLSACRTYGNIDMGE 222
++ ++ +++SAC + G + G+
Sbjct: 234 ANQFML---ASVISACSSLGRLQWGK 256
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 38/280 (13%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ G +DEA+ LF +M+V G+ PDK + ++L+ A+ LE G+ +H I++
Sbjct: 401 LVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSG 460
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V +L+ MY K G +E + +FN ++ +D +WT +I G A NG
Sbjct: 461 FPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG---------- 510
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
L+E+ ++ F SM + Y I P EHY C IDL GR+
Sbjct: 511 -------------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRS 545
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
G + E+L+ ++ + D + + A+L+A R +GNI+ GER A TL
Sbjct: 546 GDFVKVEQLLHQMEVEPDATV---WKAILAASRKHGNIENGERAAKTLMELEPNNAVPYV 602
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEG 280
+Y++A R ++ VR MK I K PG S ++ +G
Sbjct: 603 QLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKG 642
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 113/226 (50%), Gaps = 8/226 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY + EA LF +MQ G+KP+++ + ++L C L G IH + I+
Sbjct: 96 LISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTG 155
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK-EKDTASWTSIICGLAMNGKTNKALELF 119
+D V L+ MYA+ + ++ +F ++ EK+ +WTS++ G + NG KA+E F
Sbjct: 156 FDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECF 215
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ + G + + TF +VL+AC+ G ++ H K K N+ ID+ +
Sbjct: 216 RDLRREGNQSNQYTFPSVLTACASVSACRVGVQV-HCCIVKSGFKTNIYVQSALIDMYAK 274
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLA 225
+ A L+ + + D+++ + +++ C G I GE L+
Sbjct: 275 CREMESARALLEGM--EVDDVVS--WNSMIVGCVRQGLI--GEALS 314
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M+ GY Q +AI F D++ G + +++ ++LT CA A G +H ++++
Sbjct: 198 MLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSG 257
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +ALI+MYAK +E + + G++ D SW S+I G G +AL +F
Sbjct: 258 FKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFG 317
Query: 121 AMEKLGAKPDDVTFITVLS 139
M + K DD T ++L+
Sbjct: 318 RMHERDMKIDDFTIPSILN 336
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 5/133 (3%)
Query: 36 LLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD 95
LL ++SG ++ R + D + E D +I Y+ S + + ++F K+
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMPER----DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKN 89
Query: 96 TASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF- 154
T SW ++I G +G +A LF M+ G KP++ T +VL C+ L+ G ++
Sbjct: 90 TISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHG 149
Query: 155 HSMSSKYHIKPNL 167
H++ + + + N+
Sbjct: 150 HTIKTGFDLDVNV 162
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 141/291 (48%), Gaps = 7/291 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G+ + + A+ F +M + D F + +++ C+ L G H I
Sbjct: 474 MIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTG 533
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V AL++MY K+G E + +F+ D W S++ + +G KAL FE
Sbjct: 534 FDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFE 593
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
+ + G PD VT++++L+ACSH G +G+ L++ M + IK +HY C ++L+ +A
Sbjct: 594 QILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKA 652
Query: 181 GLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXX 240
GL+ EA EL+ + P ++ L+ LLSAC N+ +G A +
Sbjct: 653 GLVDEALELIEQSPPGNNQ--AELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHI 710
Query: 241 XXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFS 291
+YA RWEDV ++R K++ L K PG S I++ N+ FS
Sbjct: 711 LLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEV----NNNNTQVFS 757
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 84/161 (52%), Gaps = 2/161 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI G ++ ++ ++ + F +M + GV P +F +L GC++ G+ G+ IH +I +
Sbjct: 271 MIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ D + AL++MY G + ++ VF + + SW SII G + NG +A+ ++
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 121 AMEKLGA-KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
+ ++ +PD+ TF +SA + G KL H +K
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATAEPERFVHG-KLLHGQVTK 430
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 5/193 (2%)
Query: 27 KPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLE 86
+PD++ A ++ A+ HG+ +H V + VGT L+ MY K+ E + +
Sbjct: 399 RPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQK 458
Query: 87 VFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGL 146
VF+ +KE+D WT +I G + G + A++ F M + + D + +V+ ACS +
Sbjct: 459 VFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAM 518
Query: 147 VEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYG 206
+ +G ++FH ++ + + G +D+ G+ G +E E + L D + +
Sbjct: 519 LRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNG-KYETAETIFSLASNPD---LKCWN 573
Query: 207 ALLSACRTYGNID 219
++L A +G ++
Sbjct: 574 SMLGAYSQHGMVE 586
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 14 AIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIE 73
A L M VKP+ +L+ CA + G ++ +I+ + VV T+++
Sbjct: 183 AFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLG 242
Query: 74 MYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVT 133
MY+ G +E + +F+ + +D +W ++I G N K L F M G P T
Sbjct: 243 MYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFT 302
Query: 134 FITVLSACSHAGLVEEGRKLFHS 156
+ VL+ CS G G KL H+
Sbjct: 303 YSIVLNGCSKLGSYSLG-KLIHA 324
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 146/299 (48%), Gaps = 6/299 (2%)
Query: 1 MINGYVQFNRFDEAIALF-GDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I GY + D+A++LF + + + D+ + +L C G E G IH Y ++
Sbjct: 491 IIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKA 550
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
D +G +LI MYAK + ++++FN ++E D SW S+I + ++AL L+
Sbjct: 551 GYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALW 610
Query: 120 EAMEKLGAKPDDVTFITVLSACSH--AGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
M + KPD +T V+SA + + + R LF SM + Y I+P EHY F+ +L
Sbjct: 611 SRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVL 670
Query: 178 GRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXX 237
G GLL EAE+ + +P Q + V + ALL +CR + N + +R+A +
Sbjct: 671 GHWGLLEEAEDTINSMPVQPE---VSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPS 727
Query: 238 XXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSIDLEGYGNSGGVGAFSHSLTK 296
IY+++ W +R +M++ G +K P S I E +S SH K
Sbjct: 728 EYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEK 786
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 91/158 (57%), Gaps = 6/158 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I+G+ + N EA+ +F M+ G V+P+++ VA+LT C + G IH ++++
Sbjct: 151 LISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS 210
Query: 60 RIMVDTVVGTALIEMYAK---SGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKAL 116
+ V +L+ +Y K S C + L++F+ + ++D ASW +++ L GK++KA
Sbjct: 211 GFLNSVFVSNSLMSLYDKDSGSSC-DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAF 269
Query: 117 ELFEAMEKL-GAKPDDVTFITVLSACSHAGLVEEGRKL 153
+LF M ++ G D T T+LS+C+ + ++ GR+L
Sbjct: 270 DLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGREL 307
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+++ V+ + +A LF +M +V G D F + LL+ C S L GR +H I
Sbjct: 255 VVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRI 314
Query: 60 RIMVDTVVGTALIEMYAKS-------------------------------GCVEKSLEVF 88
+M + V ALI Y+K G V+ ++E+F
Sbjct: 315 GLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIF 374
Query: 89 NGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVE 148
+ EK+T ++ +++ G NG KAL+LF M + G + D + + + AC GLV
Sbjct: 375 ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDAC---GLVS 431
Query: 149 EGR--KLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTD 198
E + + H K+ N +D+ R + +AEE+ + P D
Sbjct: 432 EKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLD 483
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
+A+ LF DM RGV+ F + + + C + IH + I+ + + TAL+
Sbjct: 400 KALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALL 459
Query: 73 EMYAKSGCVEKSLEVFNGLKEK--DTASWTSIICGLAMNGKTNKALELFEAM---EKLGA 127
+M + + + E+F+ + + TSII G A NG +KA+ LF +KL
Sbjct: 460 DMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFL 519
Query: 128 KPDDVTFITVLSACSHAGLVEEGRKL 153
D+V+ +L+ C G E G ++
Sbjct: 520 --DEVSLTLILAVCGTLGFREMGYQI 543
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 2/107 (1%)
Query: 36 LLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD 95
LL AQ +E + +H ++ R T +G ALI Y K G +++ VF L
Sbjct: 86 LLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPT 144
Query: 96 TASWTSIICGLAMNGKTNKALELFEAMEKLG-AKPDDVTFITVLSAC 141
S+T++I G + +AL++F M K G +P++ TF+ +L+AC
Sbjct: 145 VVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTAC 191
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 132/266 (49%), Gaps = 5/266 (1%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQS--GALEHGRWIHDYVIENRIMVDTVVGTA 70
+ I +FG M G D+ + +L + S +L +H I++ D V +
Sbjct: 400 DIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCS 459
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
LI+ Y KSG E S +VF+ L + TSII G A NG +++ M+++ PD
Sbjct: 460 LIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPD 519
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELV 190
+VT ++VLS CSH+GLVEEG +F S+ SKY I P + Y C +DLLGRAGL+ +AE L+
Sbjct: 520 EVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLL 579
Query: 191 MKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXXXXXXXXXXXXXXXIYASAD 250
++ D + + +LL +CR + N +G R A L Y
Sbjct: 580 LQARGDADCVA---WSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIG 636
Query: 251 RWEDVNKVRSKMKDLGIKKVPGYSSI 276
+E ++R + + GYSS+
Sbjct: 637 DFEISRQIREIAASRELMREIGYSSV 662
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 1/221 (0%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ + Q ++ M++ GV + ++ GC+ + G+ +H V+++
Sbjct: 184 LLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSG 243
Query: 61 IMVDTV-VGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ + V L++ Y+ G + S+ FN + EKD SW SI+ A G +L+LF
Sbjct: 244 WNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLF 303
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M+ G +P F++ L+ CS ++ G+++ + +L ID+ G+
Sbjct: 304 SKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGK 363
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDM 220
+ + L LP E L +L+ T I+M
Sbjct: 364 CNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEM 404
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 1/131 (0%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTV-VGTAL 71
+++ LF MQ G +P ++ L C+++ ++ G+ IH YV++ V ++ V +AL
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
I+MY K +E S ++ L + S++ L G T +E+F M G D+
Sbjct: 358 IDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDE 417
Query: 132 VTFITVLSACS 142
VT TVL A S
Sbjct: 418 VTLSTVLKALS 428
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 105/220 (47%), Gaps = 8/220 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G ++ AI L+ +M G++ ++L+ C+ G +H VI
Sbjct: 83 LISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLG 142
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ V +AL+ +YA V+ +L++F+ + +++ A ++ G++ + E++
Sbjct: 143 FGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYL 202
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK--YHIKPNLEHYGCFIDLLG 178
ME G + +T+ ++ CSH LV EG++L HS+ K ++I N+ +D
Sbjct: 203 RMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQL-HSLVVKSGWNIS-NIFVANVLVDYYS 260
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNI 218
G L + +P++ V + +++S C YG++
Sbjct: 261 ACGDLSGSMRSFNAVPEKD----VISWNSIVSVCADYGSV 296
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 113/210 (53%), Gaps = 7/210 (3%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
+ +AI L +G PD+ V L CA +LEH + +HD+ ++++ D +
Sbjct: 221 YKDAIELLD----KGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNM 276
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
+I M+ + + + VF+ + +KD SW ++C + NG + AL LFE M K G KP+
Sbjct: 277 VISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPN 336
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELV 190
+ TF+TV AC+ G +EE F SM +++ I P EHY + +LG+ G L EAE+ +
Sbjct: 337 EETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYI 396
Query: 191 MKLPDQTDEIIVPLYGALLSACRTYGNIDM 220
LP E + A+ + R +G+ID+
Sbjct: 397 RDLP---FEPTADFWEAMRNYARLHGDIDL 423
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 103/178 (57%), Gaps = 7/178 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRG-VKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
+I GY + AI F DM G KPD+ ++++L+ C LE G I DY+ +N
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN 427
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+I ++ +LI MYA+ G + ++ VF+ +KE+D S+ ++ A NG + L L
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLL 487
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
M+ G +PD VT+ +VL+AC+ AGL++EG+++F S+ + P +HY C +DLL
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYAC-MDLL 539
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 38/250 (15%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++GY Q ++A+ LF DM GV+P++ V +++ C+ R + + E R
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----------------------------- 91
+ ++ V TAL++M+AK ++ + +FN L
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 92 ---KEKDTASWTSIICGLAMNGKTNKALELFEAMEKLG-AKPDDVTFITVLSACSHAGLV 147
+++ SW S+I G A NG+ A+E FE M G +KPD+VT I+VLSAC H +
Sbjct: 355 DTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGA 207
E G + + K IK N Y I + R G L EA+ + D+ E V Y
Sbjct: 415 ELGDCIVDYI-RKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF----DEMKERDVVSYNT 469
Query: 208 LLSACRTYGN 217
L +A G+
Sbjct: 470 LFTAFAANGD 479
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 91/193 (47%), Gaps = 8/193 (4%)
Query: 36 LLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD 95
+++G + G E + D + EN D V T +I +AK +E + + F+ + EK
Sbjct: 173 MISGYWKWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKS 228
Query: 96 TASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFH 155
SW +++ G A NG T AL LF M +LG +P++ T++ V+SACS R L
Sbjct: 229 VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVK 288
Query: 156 SMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTY 215
+ K ++ N +D+ + + A + +L Q + + + A++S
Sbjct: 289 LIDEK-RVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT---WNAMISGYTRI 344
Query: 216 GNIDMGERLATTL 228
G++ +L T+
Sbjct: 345 GDMSSARQLFDTM 357
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 98/191 (51%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+ YV+ I +F M + +PD + +LT C+ AL+ G+ +H ++++
Sbjct: 490 MIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKE 549
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
V +I+MY K G + + F+ + K + +WT+II N A+ FE
Sbjct: 550 FESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFE 609
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G P+ TF VLS CS AG V+E + F+ M Y+++P+ EHY I+LL R
Sbjct: 610 QMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRC 669
Query: 181 GLLHEAEELVM 191
G + EA+ L +
Sbjct: 670 GRVEEAQRLAV 680
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 97/187 (51%), Gaps = 3/187 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++GY RFD+A+ MQ G +PD + +L CA+ A++ G+ IH Y ++N
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL 448
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + + T+L+ MY+K G E + +F+ L++++ +WT++I N +E+F
Sbjct: 449 FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF-HSMSSKYHIKPNLEHYGCFIDLLGR 179
M +PD VT VL+ CS ++ G++L H + ++ P + I + G+
Sbjct: 509 LMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGK 566
Query: 180 AGLLHEA 186
G L A
Sbjct: 567 CGDLRSA 573
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 109/211 (51%), Gaps = 7/211 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDM-QVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI G R EA+ LF M + P+ I+ +L AL+ G+ +H +V+++
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 60 RIMVD-TVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALEL 118
+ V+ V + LI++Y K G + VF G K+++ SWT+++ G A NG+ ++AL
Sbjct: 346 KNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRS 405
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
M++ G +PD VT TVL C+ +++G+++ H + K PN+ + +
Sbjct: 406 IVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI-HCYALKNLFLPNVSLVTSLMVMYS 464
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
+ G+ E ++L D+ ++ V + A++
Sbjct: 465 KCGV----PEYPIRLFDRLEQRNVKAWTAMI 491
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
R+ + ++ F +M+ GV + + + + A + AL G H I+N + + T
Sbjct: 194 RYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKT 253
Query: 70 ALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAM---EKLG 126
+L++MY K G V + VF+ + E+D W ++I GLA N + +AL LF M EK+
Sbjct: 254 SLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI- 312
Query: 127 AKPDDVTFITVLSACSHAGLVEEGRKLF-HSMSSKYHIKPNLEHYGCFIDLLGRAG 181
P+ V T+L ++ G+++ H + SK +++ H G IDL + G
Sbjct: 313 -YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKCG 366
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 100/211 (47%), Gaps = 7/211 (3%)
Query: 2 INGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRI 61
I + + N + A+ + ++ RG+ + ALL C + +L HG+ +H ++ N +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 62 MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKT--NKALELF 119
+ + T L+ MY G V+ + +VF+ + SW +++ G ++GK L F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M +LG + + V + + A + +G K H+++ K + ++ +D+ +
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKT-HALAIKNGLFNSVFLKTSLVDMYFK 261
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
G + L ++ D+ E + ++GA+++
Sbjct: 262 CGKVG----LARRVFDEIVERDIVVWGAMIA 288
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 111/205 (54%), Gaps = 5/205 (2%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
+AI +F M P++F V ++L C++ AL GR +H V++ I D VGT+L+
Sbjct: 267 KAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLM 326
Query: 73 EMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDV 132
+MYAK G + +VF+G+ ++T +WTSII A G +A+ LF M++ +++
Sbjct: 327 DMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNL 386
Query: 133 TFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMK 192
T +++L AC G + G++L H+ K I+ N+ + L + G +A ++ +
Sbjct: 387 TVVSILRACGSVGALLLGKEL-HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQ 445
Query: 193 LPDQTDEIIVPLYGALLSACRTYGN 217
LP + V + A++S C + G+
Sbjct: 446 LPSRD----VVSWTAMISGCSSLGH 466
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 77/141 (54%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI+G EA+ +M GV+P+ F + L CA S +L GR IH +N
Sbjct: 457 MISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNH 516
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ + VG+ALI MYAK G V ++ VF+ + EK+ SW ++I G A NG +AL+L
Sbjct: 517 ALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMY 576
Query: 121 AMEKLGAKPDDVTFITVLSAC 141
ME G + DD F T+LS C
Sbjct: 577 RMEAEGFEVDDYIFATILSTC 597
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 99/186 (53%), Gaps = 1/186 (0%)
Query: 12 DEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTAL 71
+EAI+LF M+ R + + VV++L C GAL G+ +H +I+N I + +G+ L
Sbjct: 367 EEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTL 426
Query: 72 IEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDD 131
+ +Y K G + V L +D SWT++I G + G ++AL+ + M + G +P+
Sbjct: 427 VWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNP 486
Query: 132 VTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVM 191
T+ + L AC+++ + GR + HS++ K H N+ I + + G + EA +
Sbjct: 487 FTYSSALKACANSESLLIGRSI-HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFD 545
Query: 192 KLPDQT 197
+P++
Sbjct: 546 SMPEKN 551
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 103/190 (54%), Gaps = 3/190 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVK-PDKFIVVALLTGCAQSGALEHGRWIHDYVIEN 59
MI+GY+++ DEA ALF D G++ ++ + V LL C++ E GR +H +++
Sbjct: 154 MIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKV 213
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ + +V ++L+ YA+ G + +L F+ ++EKD SWT++I + G KA+ +F
Sbjct: 214 GVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMF 272
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M P++ T ++L ACS + GR++ HS+ K IK ++ +D+ +
Sbjct: 273 IGMLNHWFLPNEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVGTSLMDMYAK 331
Query: 180 AGLLHEAEEL 189
G + + ++
Sbjct: 332 CGEISDCRKV 341
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 138/281 (49%), Gaps = 7/281 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ GYV + EA F M GV+ D++ + +L A + G IH +
Sbjct: 291 ILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLG 350
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+ VV +ALI+MY+K G ++ + +F + K+ W +I G A NG + +A++LF
Sbjct: 351 LDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFN 410
Query: 121 AM-EKLGAKPDDVTFITVLSACSHAGL-VEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
+ ++ KPD TF+ +L+ CSH + +E F M ++Y IKP++EH I +G
Sbjct: 411 QLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMG 470
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXX--XXXXX 236
+ G + +A++++ + D + + ALL AC ++ + +A +
Sbjct: 471 QRGEVWQAKQVIQEFGFGYDGVA---WRALLGACSARKDLKAAKTVAAKMIELGDADKDE 527
Query: 237 XXXXXXXXIYASADRWEDVNKVRSKMKDLGIKKVPGYSSID 277
+YA +RW +V ++R M++ G+ K G S ID
Sbjct: 528 YLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 77/146 (52%), Gaps = 5/146 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++GYVQ RF E I LF ++ V P++F A L CA+ G IH +++
Sbjct: 127 LVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLG 186
Query: 61 IMV-DTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELF 119
+ + VVG LI+MY K G ++ ++ VF ++EKDT SW +I+ + NGK L F
Sbjct: 187 LEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFF 246
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAG 145
M PD VT+ ++ A +G
Sbjct: 247 HQM----PNPDTVTYNELIDAFVKSG 268
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 10/209 (4%)
Query: 14 AIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIE 73
A+ L D G KPD +V LL G + R +H YV ++ + +T + +L+
Sbjct: 43 AVELIND----GEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMR 98
Query: 74 MYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVT 133
Y S +E + +VF+ + + D SW S++ G +G+ + + LF + + P++ +
Sbjct: 99 FYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFS 158
Query: 134 FITVLSACSHAGLVEEGRKLFHSMSSKYHI-KPNLEHYGCFIDLLGRAGLLHEAEELVMK 192
F L+AC+ L G HS K + K N+ C ID+ G+ G + +A LV +
Sbjct: 159 FTAALAACARLHLSPLG-ACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDA-VLVFQ 216
Query: 193 LPDQTDEIIVPLYGALLSACRTYGNIDMG 221
++ D + + A++++C G +++G
Sbjct: 217 HMEEKDTVS---WNAIVASCSRNGKLELG 242
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 92/197 (46%), Gaps = 9/197 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ Y + D+A+ +F M+ + D A++ C+++G LE G W +
Sbjct: 198 LIDMYGKCGFMDDAVLVFQHME----EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNP- 252
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
DTV LI+ + KSG + +V + + +++SW +I+ G + K+ +A E F
Sbjct: 253 ---DTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M G + D+ + ++++ A A V L H+ + K + + ID+ +
Sbjct: 310 KMHSSGVRFDEYS-LSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKC 368
Query: 181 GLLHEAEELVMKLPDQT 197
G+L AE + +P +
Sbjct: 369 GMLKHAELMFWTMPRKN 385
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 8/196 (4%)
Query: 28 PDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEV 87
P F + L C + AL+ + +H+++ + + D ++IEMY+ G VE +L V
Sbjct: 182 PRLFWIAQL---CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTV 238
Query: 88 FNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLV 147
FN + E++ +W +I A NG+ A++ F ++ G KPD F + AC G +
Sbjct: 239 FNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDM 298
Query: 148 EEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGA 207
EG F SM +Y I P +EHY + +L G L EA V + D L+
Sbjct: 299 NEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVD-----LWET 353
Query: 208 LLSACRTYGNIDMGER 223
L++ R +G++ +G+R
Sbjct: 354 LMNLSRVHGDLILGDR 369
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 111/215 (51%), Gaps = 3/215 (1%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
+ EA+ + ++ +G D ++ L C + ALE R +H+ +I D A
Sbjct: 100 WREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNA 159
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPD 130
+IEMY+ V+ +L+VF + E ++ + ++ NG +A++LF ++ G KP+
Sbjct: 160 IIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPN 219
Query: 131 DVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELV 190
F V S C+ G V+EG F +M +Y I P++EHY +L +G L EA V
Sbjct: 220 GEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFV 279
Query: 191 MKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLA 225
++P + V ++ L++ R +G++++G+R A
Sbjct: 280 ERMPMEPS---VDVWETLMNLSRVHGDVELGDRCA 311
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 95/189 (50%), Gaps = 3/189 (1%)
Query: 40 CAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASW 99
C ++ L+ + +H + + +D L+EMY+ G ++ VF + EK+ +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 100 TSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSS 159
II A NG A+++F ++ G PD F + AC G V+EG F SMS
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 160 KYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
Y I P++E Y +++ G L EA E V ++P + + V ++ L++ R +GN++
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPN---VDVWETLMNLSRVHGNLE 440
Query: 220 MGERLATTL 228
+G+ A +
Sbjct: 441 LGDYCAEVV 449
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING + DEA +F M+ G P++ I L+ G +S +E G I + +
Sbjct: 299 LINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKG 358
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
++ +T+ T LI+ Y G + + EVFN + + D ++ ++ GL NGK KAL
Sbjct: 359 VVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKAL 418
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+FE M K + VT+ ++ G VE+ LF S+ SK +KPN+ Y I
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPNVITYTTMISG 477
Query: 177 LGRAGLLHEAEELVMKLPD 195
R GL+HEA+ L K+ +
Sbjct: 478 FCRRGLIHEADSLFKKMKE 496
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 106/216 (49%), Gaps = 11/216 (5%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
+ A+ LF M G +P+ AL+TG + G W+ +++ RI + + TA
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263
Query: 71 LIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMEKLG 126
LI+ + K G + ++ E++N + + D ++ S+I GL M G ++A ++F ME+ G
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 127 AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID---LLGRAGLL 183
P++V + T++ + VE+G K+F+ MS K + N Y I L+GR +
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQGYCLVGRPDV- 381
Query: 184 HEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
A+E+ ++ + + Y LL G ++
Sbjct: 382 --AQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVE 415
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 5/222 (2%)
Query: 7 QFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTV 66
+ NR+D I+LF MQ+ G+ P ++ S +++ D V
Sbjct: 95 KMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLV 154
Query: 67 VGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAM 122
T+L+ Y +E ++ +F+ + + + ++T++I L N N A+ELF M
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 123 EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGL 182
G++P+ VT+ +++ G + L M K I+PN+ + ID + G
Sbjct: 215 GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM-MKRRIEPNVITFTALIDAFVKVGK 273
Query: 183 LHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
L EA+EL + + V YG+L++ YG +D ++
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQM 315
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 109/216 (50%), Gaps = 7/216 (3%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
+ EA+ + ++ +G D ++ L C + ALE R +HD + +D
Sbjct: 92 KIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP----LDARSYH 147
Query: 70 ALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKP 129
+IEMY+ + +L VFN + ++++ +W ++I LA NG+ +A+++F + G KP
Sbjct: 148 TVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKP 207
Query: 130 DDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEEL 189
D F V AC G + EG F SM Y + ++E Y I++L G L EA +
Sbjct: 208 DKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDF 267
Query: 190 VMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLA 225
V ++ T E V ++ L++ C G +++G+R A
Sbjct: 268 VERM---TVEPSVEMWETLMNLCWVQGYLELGDRFA 300
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 114/213 (53%), Gaps = 5/213 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ + FD+A++LF +M+++G+K D +L+ G G + G + +I
Sbjct: 251 VIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN 310
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I+ D V +ALI+++ K G + ++ E++N + + DT ++ S+I G ++A
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++F+ M G +PD VT+ ++++ A V++G +LF +SSK I PN Y +
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI-PNTITYNTLVLG 429
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
++G L+ A+EL ++ + V YG LL
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NG+ R EA+AL M +PD V L+ G G + + D ++E
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD----TASWTSIICGLAMNGKTNKAL 116
D V ++ KSG +L++F ++E++ ++ +I L +G + AL
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF ME G K D VT+ +++ + G ++G K+ M + +I P++ + ID+
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR-NIIPDVVTFSALIDV 324
Query: 177 LGRAGLLHEAEEL 189
+ G L EA+EL
Sbjct: 325 FVKEGKLLEAKEL 337
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 5/200 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ +V+ + EA L+ +M RG+ PD +L+ G + L + D ++
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
D V + LI Y K+ V+ + +F + K +T ++ +++ G +GK N A
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
ELF+ M G P VT+ +L G + + ++F M K + + Y I
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHG 499
Query: 177 LGRAGLLHEAEELVMKLPDQ 196
+ A + +A L L D+
Sbjct: 500 MCNASKVDDAWSLFCSLSDK 519
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 6/192 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+IN Y + R D+ + LF ++ +G+ P+ L+ G QSG L + + ++
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKAL 116
+ V L++ +G + K+LE+F +++ + II G+ K + A
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF ++ G KPD VT+ ++ G + E LF M P+ Y I
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKED-GCTPDDFTYNILIRA 569
Query: 177 -LGRAGLLHEAE 187
LG +GL+ E
Sbjct: 570 HLGGSGLISSVE 581
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 5/200 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING +R DEA +F M +G D L+ G ++ +E G + + +
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
++ +TV LI+ + ++G V+K+ E F+ + D ++ ++ GL NG+ KAL
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+FE M+K D VT+ TV+ G VEE LF S+S K +KP++ Y +
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK-GLKPDIVTYTTMMSG 479
Query: 177 LGRAGLLHEAEELVMKLPDQ 196
L GLLHE E L K+ +
Sbjct: 480 LCTKGLLHEVEALYTKMKQE 499
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 106/198 (53%), Gaps = 7/198 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTG-CAQSGALEHGRWIHDYVIEN 59
+I+ + R ++A F +++ +G++P+ AL+ G C S + R + D +I+
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD-MIKK 254
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKA 115
+I + + +AL++ + K+G V ++ E+F + + D +++S+I GL ++ + ++A
Sbjct: 255 KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEA 314
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
++F+ M G D V++ T+++ A VE+G KLF MS + + N Y I
Sbjct: 315 NQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR-GLVSNTVTYNTLIQ 373
Query: 176 LLGRAGLLHEAEELVMKL 193
+AG + +A+E ++
Sbjct: 374 GFFQAGDVDKAQEFFSQM 391
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 108/232 (46%), Gaps = 13/232 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKF---IVVALLTGCAQ-SGALEHGRWIHDYV 56
+++ V+ ++D I+L M+V G++ D + IV+ C Q S AL I +
Sbjct: 91 LLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS----ILGKM 146
Query: 57 IENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKT 112
++ D V +L+ + + V ++ + + + E D ++ +II L +
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 113 NKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC 172
N A + F+ +E+ G +P+ VT+ +++ ++ + +L M K I PN+ Y
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSA 265
Query: 173 FIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
+D + G + EA+EL ++ + + + Y +L++ + ID ++
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 38/239 (15%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
F + F +MQ GV+PD+ +LL C++ G E R + D + RI D
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 71 LIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMEKLG 126
L++ K G ++ + E+ + K + S++++I G A G+ ++AL LF M LG
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 127 AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSS---------------------KY---- 161
D V++ T+LS + G EE + M+S KY
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 162 ---------HIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSA 211
H+ PNL Y ID + GL EA E+ + V LY AL+ A
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 110/240 (45%), Gaps = 9/240 (3%)
Query: 69 TALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL-ELFEAME 123
+ALI Y +SG E+++ VFN +KE + ++ ++I G K + + F+ M+
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 124 KLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLL 183
+ G +PD +TF ++L+ CS GL E R LF M+++ I+ ++ Y +D + + G +
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQM 390
Query: 184 HEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXX-XXXXXXXXXXX 242
A E++ ++P + V Y ++ G D L +
Sbjct: 391 DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTL 450
Query: 243 XXIYASADRWEDVNKVRSKMKDLGIKK-VPGYSSIDLEGYGNSGGVGAFSHSLTKFGLQH 301
IY R E+ + +M +GIKK V Y+++ L GYG G T+ +H
Sbjct: 451 LSIYTKVGRSEEALDILREMASVGIKKDVVTYNAL-LGGYGKQGKYDEVKKVFTEMKREH 509
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 103/222 (46%), Gaps = 13/222 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ + RFDEA+ LFG+M+ G+ D+ LL+ + G E I +
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I D V AL+ Y K G ++ +VF +K + + +++++I G + G +A+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
E+F + G + D V + ++ A GLV L M +K I PN+ Y ID
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM-TKEGISPNVVTYNSIIDA 593
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSA-CRTYGN 217
GR+ + + D ++ +P + LSA T GN
Sbjct: 594 FGRSATMDRSA-------DYSNGGSLPFSSSALSALTETEGN 628
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY + + EA+ +F + + G++ D + AL+ ++G + + D + +
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNG------------LKEKDTASWTSIICGLAM 108
I + V ++I+ + +S +++S + NG L E + + L
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTT 639
Query: 109 --NGKTNK-----------ALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFH 155
N +T K LE+F M +L KP+ VTF +L+ACS E+ L
Sbjct: 640 ESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE 699
Query: 156 SM 157
+
Sbjct: 700 EL 701
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 79/172 (45%), Gaps = 3/172 (1%)
Query: 98 SWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGL-VEEGRKLFHS 156
+++++I +G +A+ +F +M++ G +P+ VT+ V+ AC G+ ++ K F
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 157 MSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
M + ++P+ + + + R GL A L ++ ++ E V Y LL A G
Sbjct: 330 M-QRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGG 388
Query: 217 NIDMG-ERLATTLXXXXXXXXXXXXXXXXIYASADRWEDVNKVRSKMKDLGI 267
+D+ E LA +A A R+++ + +M+ LGI
Sbjct: 389 QMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 105/234 (44%), Gaps = 40/234 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ +V+ +F EA L+ DM R + PD F +L+ G L+ + + ++++
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD 395
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSII--------C---- 104
D V LI+ + KS VE E+F + + DT ++T++I C
Sbjct: 396 CFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQ 455
Query: 105 -----------------------GLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
GL NGK KALE+F+ M+K K D + T++
Sbjct: 456 KVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 142 SHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPD 195
AG V++G LF S+S K +KPN+ Y I L LL EA L+ K+ +
Sbjct: 516 CKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 86/164 (52%), Gaps = 4/164 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ ++ D+A+ LF +M+ +G++P+ +L++ G + +IE +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I + V ALI+ + K G ++ ++++ + ++ D ++ S++ G M+ + +KA
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
++FE M PD VT+ T++ + VE+G +LF MS +
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 5/228 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY R +A+AL M G +PD L+ G + D +++
Sbjct: 161 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 220
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
+ V ++ K G + +L + N ++ E D + +II L + AL
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 280
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF+ ME G +P+ VT+ +++S G + +L M K I PNL + ID
Sbjct: 281 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDA 339
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
+ G EAE+L + ++ + + Y +L++ + +D +++
Sbjct: 340 FVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 95/199 (47%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ Y + DEA+ L M +G KPD F LL+G ++G +E I + +
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
+ A I+MY G + +++F+ + D +W +++ NG ++
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+F+ M++ G P+ TF T++SA S G E+ ++ M + P+L Y +
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAA 533
Query: 177 LGRAGLLHEAEELVMKLPD 195
L R G+ ++E+++ ++ D
Sbjct: 534 LARGGMWEQSEKVLAEMED 552
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 9/192 (4%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTA 70
+++ +L M+ G+ PD + L+T C + + + + + D V A
Sbjct: 260 WNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 71 LIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMEKLG 126
L+++Y KS +++++V N + ++ S+I A +G ++A+EL M + G
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 127 AKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEA 186
KPD T+ T+LS AG VE +F M + KPN+ + FI + G G E
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTE- 437
Query: 187 EELVMKLPDQTD 198
+MK+ D+ +
Sbjct: 438 ---MMKIFDEIN 446
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 62 MVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALE 117
M+D V +I M K G V + +FNGL+E D S+TS+I A +G+ +A+
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 118 LFEAMEKLGAKPDDVTFITVLSACSHAGLV-EEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+F+ ME+ G KP +T+ +L+ G + L M S I P+ Y I
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDAYTYNTLITC 288
Query: 177 LGRAGLLHEAEEL 189
R L EA ++
Sbjct: 289 CKRGSLHQEAAQV 301
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 5/185 (2%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALI 72
EA F +++ RG PD + ++++ + + + DY+ E +L+
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 73 EMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMEKLGAK 128
M+++S KS E+ + K D S+ ++I N + A +F M G
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 129 PDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEE 188
PD +T+ T + + + + EE + M K+ +PN Y +D + EA+
Sbjct: 732 PDVITYNTFIGSYAADSMFEEAIGVVRYM-IKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790
Query: 189 LVMKL 193
V L
Sbjct: 791 FVEDL 795
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ + D A LF M+ RG++PD L+ G ++G L G + +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
+ +D VV ++ I++Y KSG + + V+ + + ++T +I GL +G+ +A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++ + K G +P VT+ +++ G + G L+ M K P++ YG +D
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDG 470
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSA-CR 213
L + GL+ A +K+ Q+ + V ++ +L+ CR
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEH----------GR 50
+I+G+ + NRFDEA+ +F M + G+KPD VA T + +E G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPD----VATFTTVMRVSIMEDAFCKHMKPTIGL 557
Query: 51 WIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGL 106
+ D + N+I D V +I + K +E + + FN L E D ++ ++ICG
Sbjct: 558 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 617
Query: 107 AMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPN 166
+ ++A +FE ++ P+ VT ++ ++ ++F M+ K KPN
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS-KPN 676
Query: 167 LEHYGCFIDLLGRA 180
YGC +D ++
Sbjct: 677 AVTYGCLMDWFSKS 690
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 13/184 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MI GY R DEA +F ++V P+ + L+ ++ ++ + + E
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ V L++ ++KS +E S ++F ++EK S++ II GL G+ ++A
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+F PD V + ++ G + E L+ M + +KP+ DL
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM-LRNGVKPD--------DL 783
Query: 177 LGRA 180
L RA
Sbjct: 784 LQRA 787
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 87/200 (43%), Gaps = 13/200 (6%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ + AL+ DM G PD I L+ G ++ G + H ++
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFN-----GLKEKDTASWTSIIC------GLAMN 109
I ++ VV +LI+ + + +++L+VF G+K D A++T+++ +
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP-DVATFTTVMRVSIMEDAFCKH 550
Query: 110 GKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEH 169
K L+LF+ M++ D V+ +E+ K F+++ ++P++
Sbjct: 551 MKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG-KMEPDIVT 609
Query: 170 YGCFIDLLGRAGLLHEAEEL 189
Y I L EAE +
Sbjct: 610 YNTMICGYCSLRRLDEAERI 629
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 107/218 (49%), Gaps = 6/218 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ + D A LF M+ RG++PD L+ G ++G L G + +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
+ +D VV ++ I++Y KSG + + V+ + + ++T +I GL +G+ +A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++ + K G +P VT+ +++ G + G L+ M K P++ YG +D
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDG 470
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSA-CR 213
L + GL+ A +K+ Q+ + V ++ +L+ CR
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 40/219 (18%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEH------------ 48
+I+G+ + NRFDEA+ +F M + G+KPD ++ G LE
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 49 -----------------------GRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSL 85
G + D + N+I D V +I + K +E +
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621
Query: 86 EVFNGL----KEKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
+ FN L E D ++ ++ICG + ++A +FE ++ P+ VT ++
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Query: 142 SHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
++ ++F M+ K KPN YGC +D ++
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGS-KPNAVTYGCLMDWFSKS 719
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 9/234 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ + AL+ DM G PD I L+ G ++ G + H ++
Sbjct: 432 LIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQS 491
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFN-----GLKEKDTASWTSIICGLAMNGKTNKA 115
I ++ VV +LI+ + + +++L+VF G+K D A++T+++ M G+ +A
Sbjct: 492 IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP-DVATFTTVMRVSIMEGRLEEA 550
Query: 116 LELFEAMEKLGAKPDDVTFITVLSA-CSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFI 174
L LF M K+G +PD + + T++ A C H G +LF M + I ++ I
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMK-PTIGLQLFDLM-QRNKISADIAVCNVVI 608
Query: 175 DLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
LL + + +A + L + E + Y ++ + +D ER+ L
Sbjct: 609 HLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 7/194 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G NR DEAI + M +G P+ L G +S ++ G + D + +
Sbjct: 159 LIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRG 218
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVF-----NGLKEKDTASWTSIICGLAMNGKTNKA 115
+ +TV LI+ Y ++G ++ +L VF NGL + S+ ++ GL NG+ KA
Sbjct: 219 VAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIP-NIRSYNIVLAGLFANGEVEKA 277
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
L FE M+K D +T+ ++ A +V+E LF+ + K ++P+ + Y I
Sbjct: 278 LSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK-RVEPDFKAYTIMIA 336
Query: 176 LLGRAGLLHEAEEL 189
L RAG+ EA+ L
Sbjct: 337 ELNRAGMRTEADAL 350
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 81/152 (53%), Gaps = 6/152 (3%)
Query: 14 AIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHG-RWIHDYVIENRIMVDTVVGTALI 72
A+ + M+ RG+ P+ +L+TG +SG L R +H+ + +I + + +ALI
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHE-MDSKKINPNVITFSALI 125
Query: 73 EMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELFEAMEKLGAK 128
+ YAK G + K V+ + + + +++S+I GL M+ + ++A+++ + M G
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 129 PDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
P+ VT+ T+ + + V++G KL M +
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 73/160 (45%), Gaps = 5/160 (3%)
Query: 64 DTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKALELF 119
D V ++L+ + S ++ ++ V +++ +D T +I L N ALE+
Sbjct: 12 DIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVL 71
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
+ M+ G P+ VT+ ++++ +G + + + H M SK I PN+ + ID +
Sbjct: 72 KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK-KINPNVITFSALIDAYAK 130
Query: 180 AGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
G L + + + + + + V Y +L+ + +D
Sbjct: 131 RGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVD 170
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ +R D+A +F M + PD L+ G +S +E G + +
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL 116
++ DTV T LI+ G + + +VF + D +++ ++ GL NGK KAL
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
E+F+ M+K K D + T++ AG V++G LF S+S K +KPN+ Y I
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISG 474
Query: 177 LGRAGLLHEAEELVMKLPD 195
L LL EA L+ K+ +
Sbjct: 475 LCSKRLLQEAYALLKKMKE 493
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 99/228 (43%), Gaps = 5/228 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY R +A+AL M G +PD L+ G + D +++
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG 145
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
+ V ++ K G ++ + + N ++ E D + +II L + AL
Sbjct: 146 CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDAL 205
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF+ ME G +P+ VT+ +++S G + +L M K I PNL + ID
Sbjct: 206 NLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFNALIDA 264
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
+ G EAE+L + ++ + + Y +L++ + +D +++
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 84/164 (51%), Gaps = 4/164 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ ++ D+A+ LF +M+ +G++P+ +L++ G + +IE +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I + V ALI+ + K G ++ ++ + + ++ D ++ S+I G M+ + +KA
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
++FE M PD T+ T++ + VE+G +LF MS +
Sbjct: 311 QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHR 354
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ + + +R EA+ +F +M +G KPD + +L++G + ++H W+ +I
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKAL 116
++ +TV LI + + G ++++ ++ N + D ++ S+I GL G+ +KA
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LFE M + G P +++ +++ +G+VEE + M + P++ + I+
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS-TPDIVTFNSLING 643
Query: 177 LGRAGLLHEAEELVMKL 193
L RAG + + + KL
Sbjct: 644 LCRAGRIEDGLTMFRKL 660
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 10/215 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G +F+R +EA + M +RG PD L+ G + G ++ + + + +
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPE 352
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-----DTASWTSIICGLAMNGKTNKA 115
I V+ LI + G ++ + V + + D ++ S+I G G A
Sbjct: 353 I----VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
LE+ M G KP+ ++ ++ G ++E + + MS+ +KPN + C I
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLIS 467
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
+ + EA E+ ++P + + V + +L+S
Sbjct: 468 AFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%), Gaps = 7/198 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I GY + A+ + DM+ +G KP+ + L+ G + G ++ + + + +
Sbjct: 395 LIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG 454
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ +TV LI + K + +++E+F + K D ++ S+I GL + AL
Sbjct: 455 LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHAL 514
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLE-HYGCFID 175
L M G + VT+ T+++A G ++E RKL + M + P E Y I
Sbjct: 515 WLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV--FQGSPLDEITYNSLIK 572
Query: 176 LLGRAGLLHEAEELVMKL 193
L RAG + +A L K+
Sbjct: 573 GLCRAGEVDKARSLFEKM 590
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ + NR +EA+ L +M + G PD ++ G + + + + ++
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
D + L+ K G V+ + ++F + + + + ++I G +G+ + A +
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 121 AM-EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
M G PD T+ +++ GLV ++ H M +K KPN+ Y +D +
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCK 436
Query: 180 AGLLHEA 186
G + EA
Sbjct: 437 LGKIDEA 443
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 8/207 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G N+ +EAI + D + G+ PD + ++ GC ++ E G+ D ++
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ +TVV LI Y +SG + +LE+ +K K ++A++TS+I G+++ + +A
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LFE M G +P+ + ++ G + + L M SK ++ PN Y I
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK-NVHPNKITYTVMIGG 759
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVP 203
R G + EA L L + ++ IVP
Sbjct: 760 YARDGNVTEASRL---LNEMREKGIVP 783
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G + + +A+ L+ +G D ALL G ++G L+ I ++
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 61 IMVDTVVGTALIEMYAKSGCV--EKSLEVFNGLKE-------KDTASWTSIICGLAMNGK 111
++D V LI SGC +K E F L E D +++ +ICGL K
Sbjct: 536 CVMDRVSYNTLI-----SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 112 TNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYG 171
+A++ ++ ++ G PD T+ ++ C A EEG++ F M SK +++PN Y
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYN 649
Query: 172 CFIDLLGRAGLLHEAEEL 189
I R+G L A EL
Sbjct: 650 HLIRAYCRSGRLSMALEL 667
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 101/207 (48%), Gaps = 8/207 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G N+ +EAI + D + G+ PD + ++ GC ++ E G+ D ++
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ +TVV LI Y +SG + +LE+ +K K ++A++TS+I G+++ + +A
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LFE M G +P+ + ++ G + + L M SK ++ PN Y I
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK-NVHPNKITYTVMIGG 759
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVP 203
R G + EA L L + ++ IVP
Sbjct: 760 YARDGNVTEASRL---LNEMREKGIVP 783
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G + + +A+ L+ +G D ALL G ++G L+ I ++
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535
Query: 61 IMVDTVVGTALIEMYAKSGCV--EKSLEVFNGLKE-------KDTASWTSIICGLAMNGK 111
++D V LI SGC +K E F L E D +++ +ICGL K
Sbjct: 536 CVMDRVSYNTLI-----SGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNK 590
Query: 112 TNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYG 171
+A++ ++ ++ G PD T+ ++ C A EEG++ F M SK +++PN Y
Sbjct: 591 VEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK-NVQPNTVVYN 649
Query: 172 CFIDLLGRAGLLHEAEEL 189
I R+G L A EL
Sbjct: 650 HLIRAYCRSGRLSMALEL 667
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING R EA+ L M G KP + AL+ G +G + + D ++E
Sbjct: 148 LINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETG 207
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ V ++++ KSG ++E+ ++E+ D ++ II GL +G + A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF ME G K D + + T++ +AG ++G KL M K I P++ + ID
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM-IKRKITPDVVAFSALIDC 326
Query: 177 LGRAGLLHEAEEL 189
+ G L EAEEL
Sbjct: 327 FVKEGKLREAEEL 339
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 9/186 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+INGY + N D+ + LF M +RGV D L+ G + G LE + + ++ R
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
+ D V L++ +G EK+LE+F ++ E D + II G+ K + A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+LF ++ G KPD T+ ++ G + E LF M H PN GC ++
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH-SPN----GCTYNI 567
Query: 177 LGRAGL 182
L RA L
Sbjct: 568 LIRAHL 573
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G + D A LF +M+++G K D I L+ G +G + G + +I+ +
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I D V +ALI+ + K G + ++ E+ + ++ DT ++TS+I G + +KA
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+ + M G P+ TF +++ A L+++G +LF MS + + + Y I
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTV-TYNTLIQG 431
Query: 177 LGRAGLLHEAEELVMKL 193
G L A+EL ++
Sbjct: 432 FCELGKLEVAKELFQEM 448
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ + N+ D+A + M +G P+ L+ G ++ ++ G + +
Sbjct: 358 LIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRG 417
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
++ DTV LI+ + + G +E + E+F + + D S+ ++ GL NG+ KAL
Sbjct: 418 VVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKAL 477
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
E+FE +EK + D + ++ +A V++ LF S+ K +KP+++ Y I
Sbjct: 478 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGG 536
Query: 177 LGRAGLLHEAEELVMKLPD 195
L + G L EA+ L K+ +
Sbjct: 537 LCKKGSLSEADLLFRKMEE 555
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 93 EKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRK 152
E DT +++++I GL + G+ ++ALEL + M ++G KP +T +++ G V +
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198
Query: 153 LFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSAC 212
L M + +PN YG + ++ ++G A EL+ K+ ++ ++ Y ++
Sbjct: 199 LIDRM-VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 213 RTYGNID 219
G++D
Sbjct: 258 CKDGSLD 264
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 7/195 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ + D + M +G++PD + L+ G ++G L R I D +I
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVF-----NGLKEKDTASWTSIICGLAMNGKTNKA 115
+ D + T LI+ + + G VE +LE+ NG+ E D +++++CG+ G+ A
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI-ELDRVGFSALVCGMCKEGRVIDA 469
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
M + G KPDDVT+ ++ A G + G KL M S H+ P++ Y ++
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLN 528
Query: 176 LLGRAGLLHEAEELV 190
L + G + A+ L+
Sbjct: 529 GLCKLGQMKNADMLL 543
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 83/187 (44%), Gaps = 14/187 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+INGY + DE L M+ +PD F AL+ + ++ + D + +
Sbjct: 281 LINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRG 340
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
++ + V+ T LI ++++G ++ E + + K D + +++ G NG A
Sbjct: 341 LIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAAR 400
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+ + M + G +PD +T+ T++ G VE + I+ ++ G +D
Sbjct: 401 NIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE----------TALEIRKEMDQNGIELDR 450
Query: 177 LGRAGLL 183
+G + L+
Sbjct: 451 VGFSALV 457
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTG-CAQSGALEHGRWIHDYVIEN 59
+I+G+ + + A+ + +M G++ D+ AL+ G C + ++ R + + ++
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALRE-MLRA 479
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKA 115
I D V T +++ + K G + ++ ++ ++ ++ GL G+ A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKP------NLEH 169
L +AM +G PDD+T+ T+L EG + S +Y KP +L
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLL----------EGHHRHANSSKRYIQKPEIGIVADLAS 589
Query: 170 YGCFIDLLGRAGLLHE 185
Y ++ L RA H
Sbjct: 590 YKSIVNELDRASKDHR 605
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 40/258 (15%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
MING+V+ + A A+F DM G+KPD + +++ G ++ + + R
Sbjct: 525 MINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVF-------------------NGLKEK------- 94
T +I YAKSG + +SLEVF NGL EK
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAV 644
Query: 95 -------------DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
+ ++T I+ G A G T KA E F ++ G D T+ +L AC
Sbjct: 645 EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKAC 704
Query: 142 SHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEII 201
+G ++ + MS++ +I N Y ID R G + EA +L+ ++ + +
Sbjct: 705 CKSGRMQSALAVTKEMSAR-NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Query: 202 VPLYGALLSACRTYGNID 219
+ Y + +SAC G+++
Sbjct: 764 IHTYTSFISACSKAGDMN 781
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 6/187 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++ GY +A F +Q G+ D F ALL C +SG ++ + +
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I ++ V LI+ +A+ G V ++ ++ +K++ D ++TS I + G N+A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFI-D 175
+ E ME LG KP+ T+ T++ + A L E+ + M + IKP+ Y C +
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKA-MGIKPDKAVYHCLLTS 843
Query: 176 LLGRAGL 182
LL RA +
Sbjct: 844 LLSRASI 850
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 18/225 (8%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++G + R +A +F DM RG+ P++ L++G Q G+ + R + + +
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSG 263
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD-----TASWTSIICGLAMNGKTNKA 115
D+V AL++ + K G + ++ E+ L EKD ++S+I GL + +A
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLR-LFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
EL+ M K KPD + + ++ S AG +E+ KL SM SK I P+ Y I
Sbjct: 323 FELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK-GISPDTYCYNAVIK 381
Query: 176 LLGRAGLLHEAEELVMKL------PDQTDEIIVPLYGALLSACRT 214
L GLL E L +++ PD I+ + S CR
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTIL-----ICSMCRN 421
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G + R+ +A L+ +M + +KPD + L+ G +++G +E + +
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG 368
Query: 61 IMVDTVVGTALIEMYAKSGCVEK----SLEVFNGLKEKDTASWTSIICGLAMNGKTNKAL 116
I DT A+I+ G +E+ LE+ D + T +IC + NG +A
Sbjct: 369 ISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAE 428
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSM 157
E+F +EK G P TF ++ +G ++E R L H M
Sbjct: 429 EIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 7/233 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ + NR D+A + M+ + PD ++ G L+ + + ++ +
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFN-----GLKEKDTASWTSIICGLAMNGKTNKA 115
+ T LIE G V+++L++ + GLK D ++ +II G+ G ++A
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK-PDMFTYNTIIRGMCKEGMVDRA 282
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
E+ +E G +PD +++ +L A + G EEG KL M S+ PN+ Y I
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILIT 341
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
L R G + EA L+ + ++ Y L++A G +D+ T+
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G+ +A+ + ++ G +PD F AL+ G + ++ + D +
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
DTV +I G ++ +L+V N L + ++T +I + G ++AL
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+L + M G KPD T+ T++ G+V+ ++ ++ K +P++ Y +
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK-GCEPDVISYNILLRA 307
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSA-CR 213
L G E E+L+ K+ + + V Y L++ CR
Sbjct: 308 LLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 40/232 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G + D A + +++++G +PD LL G E G + + +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-------------------------- 94
+ V + LI + G +E+++ + +KEK
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 95 -------------DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
D ++ +++ L NGK ++ALE+F + ++G P+ ++ T+ SA
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 142 SHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKL 193
+G + M S I P+ Y I L R G++ EA EL++ +
Sbjct: 449 WSSGDKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 5/232 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NG+ NR EA+AL M G +PD L+ G Q + + ++
Sbjct: 141 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
D V A+I K G + +L + N ++ E D ++++I L + AL
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF M+ G +PD T+ +++S + G + +L M + I PN+ + ID
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVTFNSLIDA 319
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
+ G L EAE+L ++ ++ + + Y +L++ + +D +++ T +
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ +R DEA +F M + PD L+ G ++ + G + +
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRG 410
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL 116
++ +TV T LI + ++ + + VF + + ++ +++ GL NGK KA+
Sbjct: 411 LVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 470
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+FE ++K +PD T+ + AG VE+G LF S+S K +KP++ Y I
Sbjct: 471 VVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLK-GVKPDVIAYNTMISG 529
Query: 177 LGRAGLLHEAEELVMKLPD 195
+ GL EA L +K+ +
Sbjct: 530 FCKKGLKEEAYTLFIKMKE 548
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ ++ D+A+ LF +M +G++PD F +L++ G + ++E +
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I + V +LI+ +AK G + ++ ++F+ + ++ + ++ S+I G M+ + ++A
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
++F M PD VT+ T+++ A V +G +LF MS +
Sbjct: 366 QIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 41/235 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ + R+ +A L DM + + PD AL+ + G L ++D +++++
Sbjct: 291 LISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSK 350
Query: 61 -IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSII--------C--- 104
D V LI+ + K VE+ +EVF + ++ +T ++T++I C
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 105 ------------------------GLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSA 140
GL NG AL +FE M+K K D VT+ T++ A
Sbjct: 411 QMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEA 470
Query: 141 CSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPD 195
AG VE+G LF S+S K +KPN+ Y + R GL EA+ L +++ +
Sbjct: 471 LCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKE 524
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NG+ NR EA+AL M G +PD L+ G Q + + ++
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
D V A+I K G + +L + N ++ E D + +II GL + A
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+LF ME G KPD T+ ++S + G + +L M K +I P+L + ID
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDA 329
Query: 177 LGRAGLLHEAEEL 189
+ G L EAE+L
Sbjct: 330 FVKEGKLVEAEKL 342
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 4/178 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++G Q N+ EA+AL M V+G +PD A++ G + G + + + + + +
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I D V+ +I+ K ++ + ++FN ++ K D ++ +I L G+ + A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFI 174
L M + PD V F ++ A G + E KL+ M H P++ Y I
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G ++ D+A+ LF +M +G++PD F +L++ G + +IE +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I + V +ALI+ + K G + ++ ++++ + ++ D +++S+I G M+ + ++A
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
+FE M P+ VT+ T++ A VEEG +LF MS +
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 5/223 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY R +A+AL M G KPD F L+ G + D +++
Sbjct: 159 LLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
D V ++ K G ++ +L + ++ E D + +II GL + AL
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF M+ G +PD T+ +++S + G + +L M + I PN+ + ID
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDA 337
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
+ G L EAE+L ++ ++ + + Y +L++ + +D
Sbjct: 338 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 40/234 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ +V+ + EA L+ +M R + PD F +L+ G L+ + + + +I
Sbjct: 334 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 393
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSII--------C---- 104
+ V + LI+ + K+ VE+ +E+F + ++ +T ++T++I C
Sbjct: 394 CFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 453
Query: 105 -----------------------GLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
GL NGK KA+ +FE +++ +PD T+ ++
Sbjct: 454 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 513
Query: 142 SHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPD 195
AG VE+G +LF ++S K + PN+ Y I R G EA+ L+ K+ +
Sbjct: 514 CKAGKVEDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKE 566
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 101/258 (39%), Gaps = 6/258 (2%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
+ D+A+ LFGDM P LL+ A+ E + + + I D +
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 70 ALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMEKL 125
I + + + +L V + E D + +S++ G + + + A+ L + M ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 126 GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHE 185
G KPD TF T++ E L M + +P+L YG ++ L + G +
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 186 AEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXX-XXXXXXXXXXXXX 244
A L+ K+ E V +Y ++ Y ++D L T +
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 245 IYASADRWEDVNKVRSKM 262
+ RW D +++ S M
Sbjct: 302 CLCNYGRWSDASRLLSDM 319
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G ++R DEA +FG M +G PD L+ G +S +EHG + + +
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRG 356
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKAL 116
++ +TV T LI+ Y ++G + + E+F + + ++ ++ GL NGK KAL
Sbjct: 357 VVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKAL 416
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+ M+K G D VT+ ++ AG V + ++ S++ + + P++ Y +
Sbjct: 417 VILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ-GLMPDIWTYTTMMLG 475
Query: 177 LGRAGLLHEAEELVMKLPD 195
L + GL EA+ L K+ +
Sbjct: 476 LYKKGLRREADALFRKMKE 494
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G + + D A+ L M+ G+ PD +L++G SG + + +
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I D ALI+ K G V ++ E + + + D +++ +I GL M + ++A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAE 311
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
E+F M G PD VT+ +++ + VE G KLF MS + ++ N Y I
Sbjct: 312 EMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR-NTVTYTILIQG 370
Query: 177 LGRAGLLHEAEELVMKL 193
RAG L+ AEE+ ++
Sbjct: 371 YCRAGKLNVAEEIFRRM 387
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 101/229 (44%), Gaps = 7/229 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGC-AQSGALEHGRWIHDYVIEN 59
+++ + ++D I L+ MQ+ G+ P +L C + L +I+
Sbjct: 87 LLSAISKMKKYDVVIYLWEQMQMLGI-PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKL 145
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKA 115
V +L+ + + V +L +F+ + + + + +II GL + + + A
Sbjct: 146 GHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNA 205
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
L+L MEK G PD VT+ +++S +G + ++ M +K I P++ + ID
Sbjct: 206 LDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCM-TKREIYPDVFTFNALID 264
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
+ G + EAEE ++ ++ + + Y L+ Y +D E +
Sbjct: 265 ACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEM 313
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING R EA+ L M G KPD + L+ G SG + D ++E
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ V ++ + KSG ++E+ ++E+ D ++ II GL +G + A
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF ME G + +T+ ++ +AG ++G KL M K I PN+ + ID
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM-IKRKINPNVVTFSVLIDS 342
Query: 177 LGRAGLLHEAEEL 189
+ G L EAEEL
Sbjct: 343 FVKEGKLREAEEL 355
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 4/166 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+INGY + NR D+ + LF M +RGV D L+ G + G L + + ++ +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
+ + V L++ +G EK+LE+F ++ E D + II G+ K + A
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYH 162
+LF ++ G KP T+ ++ G + E LF M H
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 98/199 (49%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ + N D+A + M +G P+ L+ G ++ ++ G + +
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
++ DTV LI+ + + G + + E+F + + + ++ ++ GL NG++ KAL
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
E+FE +EK + D + ++ +A V++ LF S+ K +KP ++ Y I
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPGVKTYNIMIGG 552
Query: 177 LGRAGLLHEAEELVMKLPD 195
L + G L EAE L K+ +
Sbjct: 553 LCKKGPLSEAELLFRKMEE 571
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ +V+ + EA L +M RG+ PD +L+ G + L+ + D ++
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ LI Y K+ ++ LE+F + + DT ++ ++I G GK N A
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
ELF+ M P+ VT+ +L G E+ ++F + K ++ ++ Y I
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI-EKSKMELDIGIYNIIIHG 517
Query: 177 LGRAGLLHEAEELVMKLP 194
+ A + +A +L LP
Sbjct: 518 MCNASKVDDAWDLFCSLP 535
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
Query: 93 EKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRK 152
E +T +++++I GL + G+ ++ALEL + M ++G KPD +T T+++ +G E
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 153 LFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSAC 212
L M +Y +PN YG ++++ ++G A EL+ K+ ++ ++ Y ++
Sbjct: 215 LIDKM-VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 213 RTYGNID 219
+G++D
Sbjct: 274 CKHGSLD 280
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 5/228 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING + +++ A +F +M G+ PD +LL + G + + +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL 116
++ D V ++++ ++ +SG ++K+L FN +KE D +T +I G G + A+
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
L M + G D VT+ T+L ++ E KLF+ M+ + + P+ ID
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER-ALFPDSYTLTILIDG 489
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
+ G L A EL K+ ++ + V Y LL G+ID + +
Sbjct: 490 HCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 88/190 (46%), Gaps = 5/190 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I V+ + A ++ ++ GV + + + ++ + G +E V E
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKAL 116
+ D V LI Y+ G +E++ E+ N + K + ++ ++I GL +GK +A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
E+F M + G PD T+ ++L G V E K+F M S+ + P+L + + L
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSR-DVVPDLVCFSSMMSL 384
Query: 177 LGRAGLLHEA 186
R+G L +A
Sbjct: 385 FTRSGNLDKA 394
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 106/227 (46%), Gaps = 7/227 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++ + + D+A+ F ++ G+ PD I L+ G + G + + + +++
Sbjct: 381 MMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+D V ++ K + ++ ++FN + E+ D+ + T +I G G A+
Sbjct: 441 CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAM 500
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
ELF+ M++ + D VT+ T+L G ++ ++++ M SK I P Y ++
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNA 559
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSA-CRTYGNIDMGE 222
L G L EA + ++ + + V + +++ CR+ GN GE
Sbjct: 560 LCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRS-GNASDGE 605
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 5/214 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ Y + N +EA+ +F MQ G KPD+ L+ A++G L+ ++ +
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD-TASWTSIICGLAMNGKT---NKAL 116
+ DT + +I K+G + + ++F + ++ T + + + ++ K AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+L+ M+ G +PD VT+ V+ H G +EE +F M K I P+ YG +DL
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDL 583
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
G+AG + +A + + VP +LLS
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++ + + + A+ L+ DMQ G +PDK ++ G LE + + +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKAL 116
+ D V L++++ K+G VEK+ + + + + + S++ K +A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACS 142
EL + M LG +P T+ +LS C+
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCT 655
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 93 EKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRK 152
+ +T ++ +I N+A+ +F M++ G KPD VT+ T++ + AG ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 153 LFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
++ M + + P+ Y I+ LG+AG L A +L ++ DQ
Sbjct: 456 MYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 5/214 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ Y + N +EA+ +F MQ G KPD+ L+ A++G L+ ++ +
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD-TASWTSIICGLAMNGKT---NKAL 116
+ DT + +I K+G + + ++F + ++ T + + + ++ K AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+L+ M+ G +PD VT+ V+ H G +EE +F M K I P+ YG +DL
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDL 583
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
G+AG + +A + + VP +LLS
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++ + + + A+ L+ DMQ G +PDK ++ G LE + + +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKAL 116
+ D V L++++ K+G VEK+ + + + + + S++ K +A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACS 142
EL + M LG +P T+ +LS C+
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCT 655
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 93 EKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRK 152
+ +T ++ +I N+A+ +F M++ G KPD VT+ T++ + AG ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 153 LFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
++ M + + P+ Y I+ LG+AG L A +L ++ DQ
Sbjct: 456 MYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ Y + N EA+ +F MQ G +PD+ L+ A++G L+ ++ + E
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAG 459
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVF-NGLKEKDTASWTSIICGLAMNGKTNK---AL 116
+ DT + +I K+G + + +F + + T + + +A++ K AL
Sbjct: 460 LSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETAL 519
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+L+ M+ G +PD VT+ V+ H G +EE +F M K + P+ YG +DL
Sbjct: 520 KLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDL 578
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
G+AG + +A + + VP +LLS
Sbjct: 579 WGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 87/204 (42%), Gaps = 38/204 (18%)
Query: 54 DYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMN 109
D ++ + +TV LI Y ++ +++++ VFN ++ E D ++ ++I A
Sbjct: 383 DEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKA 442
Query: 110 GKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF--------------- 154
G + A+++++ M++ G PD T+ +++ AG + +LF
Sbjct: 443 GFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTF 502
Query: 155 ------HSMSSKYH-------------IKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPD 195
H+ + Y +P+ Y +++LG G L EAE + ++
Sbjct: 503 NIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQR 562
Query: 196 QTDEIIVPLYGALLSACRTYGNID 219
+ P+YG L+ GN+D
Sbjct: 563 KNWVPDEPVYGLLVDLWGKAGNVD 586
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 5/214 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ Y + N +EA+ +F MQ G KPD+ L+ A++G L+ ++ +
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD-TASWTSIICGLAMNGKT---NKAL 116
+ DT + +I K+G + + ++F + ++ T + + + ++ K AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+L+ M+ G +PD VT+ V+ H G +EE +F M K I P+ YG +DL
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDL 583
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
G+AG + +A + + VP +LLS
Sbjct: 584 WGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLS 617
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++ + + + A+ L+ DMQ G +PDK ++ G LE + + +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKAL 116
+ D V L++++ K+G VEK+ + + + + + S++ K +A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACS 142
EL + M LG +P T+ +LS C+
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCCT 655
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 93 EKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRK 152
+ +T ++ +I N+A+ +F M++ G KPD VT+ T++ + AG ++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 153 LFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
++ M + + P+ Y I+ LG+AG L A +L ++ DQ
Sbjct: 456 MYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NG R EA+ L M G KP + L+ G +G + + D ++E
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ V ++ + KSG ++E+ ++E+ D ++ II GL +G + A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF ME G K D +T+ T++ +AG ++G KL M K I PN+ + ID
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM-IKRKISPNVVTFSVLIDS 342
Query: 177 LGRAGLLHEAEELVMKL 193
+ G L EA++L+ ++
Sbjct: 343 FVKEGKLREADQLLKEM 359
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 4/173 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+INGY + NR D+ + LF +M +RGV + L+ G QSG LE + + ++ R
Sbjct: 409 LINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR 468
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
+ D V L++ +G +EK+LE+F ++ E D + II G+ K + A
Sbjct: 469 VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAW 528
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEH 169
+LF ++ G K D + ++S + + LF M+ + H L +
Sbjct: 529 DLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 97/197 (49%), Gaps = 5/197 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G + D A LF +M+++G K D L+ G +G + G + +I+ +
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I + V + LI+ + K G + ++ ++ + ++ +T ++ S+I G + +A+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++ + M G PD +TF +++ A +++G +LF MS + I N Y +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVI-ANTVTYNTLVQG 447
Query: 177 LGRAGLLHEAEELVMKL 193
++G L A++L ++
Sbjct: 448 FCQSGKLEVAKKLFQEM 464
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 90/183 (49%), Gaps = 5/183 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++G + RF A LF +M R + PD ++ L+ G +SG + R + +E
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ VD V A+I+ + +SG ++++L N + E+ D ++++II G A+
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++F MEK KP+ VT+ ++++ G + + F M + + PN+ Y I
Sbjct: 576 KIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLR-DLVPNVVTYTTLIRS 634
Query: 177 LGR 179
L +
Sbjct: 635 LAK 637
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 7/207 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G V D+A+ + + RGV PD I L++G ++G + + +++
Sbjct: 421 LIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN 480
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I+ D V LI+ + +SG +++ +VF+ EK D ++I G +G ++AL
Sbjct: 481 ILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEAL 540
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
M + PD T+ T++ + K+F M K KPN+ Y I+
Sbjct: 541 ACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYM-EKNKCKPNVVTYTSLING 599
Query: 177 LGRAGLLHEAEELV--MKLPDQTDEII 201
G AEE M+L D ++
Sbjct: 600 FCCQGDFKMAEETFKEMQLRDLVPNVV 626
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 118/232 (50%), Gaps = 10/232 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY + + A++L+ +M+ + + AL+ G + G ++ ++ ++E+R
Sbjct: 204 LIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR 263
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ +++V T +I+ + + G + +++ + + D ++ II GL NGK +A
Sbjct: 264 VEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEAT 323
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
E+ E MEK PD V F T+++A +G ++ ++H + + +P++ ID
Sbjct: 324 EIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER-GFEPDVVALSTMIDG 382
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTL 228
+ + G LHEA +V ++ +++ +Y L+ A G+ ERL + +
Sbjct: 383 IAKNGQLHEA--IVYFCIEKANDV---MYTVLIDALCKEGDFIEVERLFSKI 429
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ +R DEA +F M + P+ L+ G ++ +E G + + +
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL 116
++ +TV LI+ ++G + + ++F + D +++ ++ GL GK KAL
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+FE ++K +PD T+ ++ AG VE+G LF S+S K +KPN+ Y I
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVKPNVIIYTTMISG 544
Query: 177 LGRAGLLHEAEELVMKLPD 195
R GL EA+ L ++ +
Sbjct: 545 FCRKGLKEEADALFREMKE 563
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 107/223 (47%), Gaps = 5/223 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ + ++A+ LF +M +G++P+ +L+ G + +IE +
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I + V +ALI+ + K G + ++ ++++ + ++ D +++S+I G M+ + ++A
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+FE M P+ VT+ T++ A VEEG +LF MS + + N Y I
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR-GLVGNTVTYNTLIQG 439
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
L +AG A+++ K+ + Y LL YG ++
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 102/233 (43%), Gaps = 25/233 (10%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY R EA+AL M V +P+ L+ HG ++H+ E
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI----------HGLFLHNKASEAV 205
Query: 61 IMVDTVVGT----------ALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGL 106
++D +V ++ K G ++ +L + ++ E D +T+II L
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 107 AMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPN 166
N AL LF M+ G +P+ VT+ +++ + G + +L M + I PN
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPN 324
Query: 167 LEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
+ + ID + G L EAE+L ++ ++ + + Y +L++ + +D
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 5/193 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G N+ EA+AL M RG +PD F ++ G + G ++ + + + +
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I D V+ T +I+ V +L +F + K + ++ S+I L G+ + A
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
L M + P+ VTF ++ A G + E KL+ M K I P++ Y I+
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM-IKRSIDPDIFTYSSLING 369
Query: 177 LGRAGLLHEAEEL 189
L EA+ +
Sbjct: 370 FCMHDRLDEAKHM 382
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 103/258 (39%), Gaps = 6/258 (2%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGT 69
+ D+A+ LFG+M P LL+ A+ + + + + RI D
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 70 ALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAMEKL 125
LI + + + +L V + E D + +S++ G + ++A+ L + M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 126 GAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHE 185
+P+ VTF T++ E L M ++ +P+L YG ++ L + G +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 186 AEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXX-XXXXXXXXXXXXX 244
A L+ K+ E V +Y ++ A Y N++ L T +
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 245 IYASADRWEDVNKVRSKM 262
+ RW D +++ S M
Sbjct: 299 CLCNYGRWSDASRLLSDM 316
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 110/214 (51%), Gaps = 10/214 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGAL-EHGRWIHDYVIEN 59
+I+G + ++A+ LF M+ GV+ D +L+ G SG + R + D V+ +
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKA 115
I+ + + TA+I+++ K G ++++++ + + D ++ S+I GL M+G+ ++A
Sbjct: 240 -IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
++ + M G PD VT+ T+++ + V+EG KLF M+ + + + Y I
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT-YNTIIQ 357
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALL 209
+AG A+E+ ++ + + + Y LL
Sbjct: 358 GYFQAGRPDAAQEIFSRMDSRPN---IRTYSILL 388
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 96/196 (48%), Gaps = 2/196 (1%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING R DEA + M +G PD L+ G +S ++ G + + +
Sbjct: 285 LINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRG 344
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK-DTASWTSIICGLAMNGKTNKALELF 119
++ DT+ +I+ Y ++G + + E+F+ + + + +++ ++ GL MN + KAL LF
Sbjct: 345 LVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 120 EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGR 179
E M+K + D T+ V+ G VE+ LF S+S K +KP++ Y I R
Sbjct: 405 ENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCK-GLKPDVVSYTTMISGFCR 463
Query: 180 AGLLHEAEELVMKLPD 195
+++ L K+ +
Sbjct: 464 KRQWDKSDLLYRKMQE 479
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 104/234 (44%), Gaps = 17/234 (7%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+IN + +RF A+++ G M G +PD V +L+ G Q + + + E
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
D V+ +I+ K G V ++E+F+ ++ D ++ S++ GL +G+ + A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
L M P+ +TF V+ G E KL+ M+ + + P++ Y I+
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRR-CVDPDVFTYNSLING 288
Query: 177 LGRAGLLHEAEE----LVMK--LPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
L G + EA++ +V K LPD V Y L++ +D G +L
Sbjct: 289 LCMHGRVDEAKQMLDLMVTKGCLPD------VVTYNTLINGFCKSKRVDEGTKL 336
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 11/218 (5%)
Query: 3 NGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIM 62
NG+V + A++LF M+ G++PD + +L+ G SG + + + +I
Sbjct: 190 NGHVNY-----ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIK 244
Query: 63 VDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKALEL 118
D + ALI+ + K G + E++N + A ++TS+I G M G ++A ++
Sbjct: 245 PDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Query: 119 FEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLG 178
F ME G PD V + ++++ V++ K+F+ MS K + N Y I G
Sbjct: 305 FYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFG 363
Query: 179 RAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYG 216
+ G + A+E+ + + + Y LL C Y
Sbjct: 364 QVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH-CLCYN 400
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 5/228 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++N + +FD I L +Q+ GV D + L+ QS +++
Sbjct: 78 LLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLG 137
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL 116
D V T+LI + +E+++ + N + E D +T+II L NG N AL
Sbjct: 138 FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYAL 197
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF+ ME G +PD V + ++++ ++G + L M +K IKP++ + ID
Sbjct: 198 SLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM-TKRKIKPDVITFNALIDA 256
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
+ G +AEEL ++ + + Y +L++ G +D ++
Sbjct: 257 FVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQM 304
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 8/202 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ + + D+A+ +F +M +G+ + L+ G Q G + + +++
Sbjct: 323 LINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRG 382
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTAS-----WT--SIICGLAMNGKTN 113
+ + L+ +G V+K+L +F +++++ WT ++ GL NGK
Sbjct: 383 VPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLE 442
Query: 114 KALELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCF 173
KAL +FE M K +T+ ++ AG V+ LF S+ SK +KPN+ Y
Sbjct: 443 KALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSK-GVKPNVVTYTTM 501
Query: 174 IDLLGRAGLLHEAEELVMKLPD 195
I L R GL HEA L K+ +
Sbjct: 502 ISGLFREGLKHEAHVLFRKMKE 523
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 5/190 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NG R+ +A +L M R +KPD AL+ + G +++ +I
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I + T+LI + GCV+++ ++F ++ K D ++TS+I G K + A+
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++F M + G + +T+ T++ G +++F M S+ + PN+ Y +
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLLHC 396
Query: 177 LGRAGLLHEA 186
L G + +A
Sbjct: 397 LCYNGKVKKA 406
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 101/197 (51%), Gaps = 5/197 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G ++ D+A+ LF +M+ +G++P+ +L++ G + +IE +
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK 321
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I D +ALI+ + K G + ++ ++++ + ++ +++S+I G M+ + ++A
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++FE M PD VT+ T++ VEEG ++F MS + + N Y I
Sbjct: 382 QMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNILIQG 440
Query: 177 LGRAGLLHEAEELVMKL 193
L +AG A+E+ ++
Sbjct: 441 LFQAGDCDMAQEIFKEM 457
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 97/199 (48%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ +R DEA +F M + PD L+ G + +E G + + +
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 426
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL 116
++ +TV LI+ ++G + + E+F + + ++ +++ GL NGK KA+
Sbjct: 427 LVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+FE +++ +P T+ ++ AG VE+G LF ++S K +KP++ Y I
Sbjct: 487 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAYNTMISG 545
Query: 177 LGRAGLLHEAEELVMKLPD 195
R G EA+ L ++ +
Sbjct: 546 FCRKGSKEEADALFKEMKE 564
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 5/228 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY R EA+AL M V G +P+ L+ G + D ++
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
D V ++ K G + + + N ++ E + +II GL + AL
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF+ ME G +P+ VT+ +++S + G + +L M + I P++ + ID
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFSALIDA 335
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
+ G L EAE+L ++ ++ + + Y +L++ + +D +++
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 40/235 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ +V+ + EA L+ +M R + PD F +L+ G L+ + + + +I
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSII--------C---- 104
+ V LI+ + K+ V++ +E+F + ++ +T ++T++I C
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 105 -----------------------GLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
GL NGK AL +FE +++ +PD T+ ++
Sbjct: 452 IVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGM 511
Query: 142 SHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQ 196
AG VE+G LF S+S K +KPN+ Y + R GL EA+ L ++ ++
Sbjct: 512 CKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 99/223 (44%), Gaps = 5/223 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NG+ NR +A++L G M G +PD F L+ G + + D ++
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
D V ++ K G ++ +L + ++ E + +II L N AL
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF M+ G +P+ VT+ +++ + G + +L M + I PN+ + ID
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFSALIDA 335
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
+ G L EAE+L ++ ++ + + Y +L++ + +D
Sbjct: 336 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 85/164 (51%), Gaps = 4/164 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ + ++A+ LF +M +G++P+ +L+ G + +IE +
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
I + V +ALI+ + K G + ++ ++++ + ++ D +++S+I G M+ + ++A
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSK 160
+FE M P+ VT+ T++ A V+EG +LF MS +
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 97/228 (42%), Gaps = 5/228 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+IN + + ++ A+A+ M G +PD + +LL G + + ++E
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
D+ LI + +++ + + + K D ++ ++ GL G + AL
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
L + ME+ +P V + T++ A + V + LF M +K I+PN+ Y I
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLIRC 300
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
L G +A L+ + ++ V + AL+ A G + E+L
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 102/262 (38%), Gaps = 14/262 (5%)
Query: 10 RFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEH----GRWIHDYVIENRIMVDT 65
+ D+A+ LFGDM P LL+ A+ + G + + I + + +
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 66 VVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEA 121
+ LI + + + +L V + E D + S++ G + + A+ L
Sbjct: 121 I----LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQ 176
Query: 122 MEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAG 181
M ++G +PD TF T++ E L M K +P+L YG ++ L + G
Sbjct: 177 MVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRG 235
Query: 182 LLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERLATTLXXX-XXXXXXXXX 240
+ A L+ K+ E V +Y ++ A Y N++ L T +
Sbjct: 236 DIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 295
Query: 241 XXXXIYASADRWEDVNKVRSKM 262
+ RW D +++ S M
Sbjct: 296 SLIRCLCNYGRWSDASRLLSDM 317
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 106/223 (47%), Gaps = 8/223 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+GY + NR ++A+ L +M +G P +L+ ++ E + + EN
Sbjct: 415 LIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENF 474
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
V + V +I+ + K G + +++++FN +K + D ++ +++ G+ G N+A
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
L ME+ G + D + +L+ + G+ ++F ++ IKP+ Y +
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS-GIKPDGVTYNTLLGC 593
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
AG+ EA ++ ++ D+ E Y ++L A GN+D
Sbjct: 594 FAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV---GNVD 633
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 13 EAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIH-DYVIENRIMVDTVVGTAL 71
+A+++F + R KP +++ Q G E ++ + E DT+ +AL
Sbjct: 180 KALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSAL 239
Query: 72 IEMYAKSGCVEKSLEVFNGLKE---KDTASWTSIICGLAMN-GKTNKALELFEAMEKLGA 127
I Y K G + ++ +F+ +K+ + T + + G+ GK KAL+LFE M++ G
Sbjct: 240 ISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGC 299
Query: 128 KPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHE 185
P T+ ++ AG V+E + M + + P++ +++LG+ G + E
Sbjct: 300 SPTVYTYTELIKGLGKAGRVDEAYGFYKDM-LRDGLTPDVVFLNNLMNILGKVGRVEE 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 101/261 (38%), Gaps = 43/261 (16%)
Query: 5 YVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVD 64
Y + + ++A+ LF +M+ G P + L+ G ++G ++ + ++ + + D
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 65 TVVGTALIEMYAKSGCVEKSLEVFNGL------------------------KEKDTASW- 99
V L+ + K G VE+ VF+ + + +SW
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWF 397
Query: 100 ---------------TSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHA 144
+ +I G + KAL L E M++ G P + ++++A A
Sbjct: 398 DKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKA 457
Query: 145 GLVEEGRKLFHSMSSKY-HIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVP 203
E +LF + + ++ + Y I G+ G L EA +L ++ +Q V
Sbjct: 458 KRYEAANELFKELKENFGNVSSRV--YAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 204 LYGALLSACRTYGNIDMGERL 224
Y AL+S G I+ L
Sbjct: 516 AYNALMSGMVKAGMINEANSL 536
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 5/154 (3%)
Query: 28 PDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTVVGTALIEMYAKSGCVEKSLEV 87
PD AL++ + G + + D + +N + + T L+ +Y K G VEK+L++
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 88 FNGLKEKDTA----SWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSH 143
F +K + ++T +I GL G+ ++A ++ M + G PD V +++
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 144 AGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLL 177
G VEE +F M + P + Y I L
Sbjct: 351 VGRVEELTNVFSEMGM-WRCTPTVVSYNTVIKAL 383
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 95/200 (47%), Gaps = 9/200 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I + R ++ ++ DM + PD ++ + ++G E GR + + + R
Sbjct: 488 LIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARR 547
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ D + LI K+G ++ E+F +KE+ DT ++ +I G GK NKA
Sbjct: 548 FVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAY 607
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+L E M+ G +P VT+ +V+ + ++E LF SK I+ N+ Y ID
Sbjct: 608 QLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSLIDG 666
Query: 177 LGRAGLLHEA----EELVMK 192
G+ G + EA EEL+ K
Sbjct: 667 FGKVGRIDEAYLILEELMQK 686
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 94/194 (48%), Gaps = 8/194 (4%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIE-N 59
+I G+ + R D A++L +M+ + D + + + G ++ W + IE N
Sbjct: 209 LIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMA-WKFFHEIEAN 267
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKD----TASWTSIICGLAMNGKTNKA 115
+ D V T++I + K+ +++++E+F L++ T ++ ++I G GK ++A
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA 327
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
L E G+ P + + +L+ G V+E K+F M K PNL Y ID
Sbjct: 328 YSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM--KKDAAPNLSTYNILID 385
Query: 176 LLGRAGLLHEAEEL 189
+L RAG L A EL
Sbjct: 386 MLCRAGKLDTAFEL 399
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 40/258 (15%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
M++ + + DEA A+F +M + PD+ +L+ G + G ++ +++ ++++
Sbjct: 418 MVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 61 IMVDTVVGTALIEMY-----------------------------------AKSGCVEKSL 85
+++V T+LI+ + K+G EK
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 86 EVFNGLKEK----DTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSAC 141
+F +K + D S++ +I GL G N+ ELF +M++ G D + V+
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 142 SHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEII 201
G V + +L M +K +P + YG ID L + L EA L + + E+
Sbjct: 598 CKCGKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 202 VPLYGALLSACRTYGNID 219
V +Y +L+ G ID
Sbjct: 657 VVIYSSLIDGFGKVGRID 674
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 81/158 (51%), Gaps = 4/158 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G + +R DEA LF + + + ++ + I +L+ G + G ++ I + +++
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL 116
+ + +L++ K+ + ++L F +KE + ++ +I GL K NKA
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAF 747
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLF 154
++ M+K G KP +++ T++S + AG + E LF
Sbjct: 748 VFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 94/251 (37%), Gaps = 46/251 (18%)
Query: 11 FDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIM-------- 62
FD + G+M V G P + ++ GC ++ L G +D V R
Sbjct: 114 FDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREG---YDVVQMMRKFKFRPAFSA 170
Query: 63 VDTVVG------------------------------TALIEMYAKSGCVEKSLEVFNGLK 92
T++G T LI +AK G V+ +L + + +K
Sbjct: 171 YTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMK 230
Query: 93 ----EKDTASWTSIICGLAMNGKTNKALELFEAMEKLGAKPDDVTFITVLSACSHAGLVE 148
+ D + I GK + A + F +E G KPD+VT+ +++ A ++
Sbjct: 231 SSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 149 EGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGLLHEAEELVMKLPDQTDEIIVPLYGAL 208
E ++F + + P Y I G AG EA L+ + + V Y +
Sbjct: 291 EAVEMFEHLEKNRRV-PCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCI 349
Query: 209 LSACRTYGNID 219
L+ R G +D
Sbjct: 350 LTCLRKMGKVD 360
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDK---FIVVALLTGCAQSGALEHGRWIHDYVI 57
MI GY +R +EAI L DM +G PDK + ++ L C + +E +
Sbjct: 318 MIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYL--CKEKRIVEVRDLMKKMAK 375
Query: 58 ENRIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTN 113
E+ ++ D V LI M K +++L +EK D +++I+ L G+ +
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 114 KALELF-EAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGC 172
+A +L E + K PD VT+ V++ G V++ +KL M + H KPN Y
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH-KPNTVSYTA 494
Query: 173 FIDLLGRAGLLHEAEELV 190
++ + R G EA E++
Sbjct: 495 LLNGMCRTGKSLEAREMM 512
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 87/195 (44%), Gaps = 6/195 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGR-WIHDYVIEN 59
+I+ + + DEA+ D Q +G + DK A++ + G + + I++ + +
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKA 115
D V TA++ + + G V+K+ ++ + + +T S+T+++ G+ GK+ +A
Sbjct: 449 HCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEA 508
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
E+ E+ P+ +T+ ++ G + E + M K P +
Sbjct: 509 REMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFF-PGPVEINLLLQ 567
Query: 176 LLGRAGLLHEAEELV 190
L R G HEA + +
Sbjct: 568 SLCRDGRTHEARKFM 582
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 105/252 (41%), Gaps = 28/252 (11%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+++G + + EA + +M ++G P + LL + G R + +
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKAL 116
++ V T +I + ++ ++ +L V + + K D ++T+++ L G+ +A
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
EL + M G P VT+ TV+ G V++ + M S+ + Y I+
Sbjct: 650 ELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTI---YNQVIEK 706
Query: 177 LGRAGLLHEAEEL---VMKLPDQTDEII------------VPLYGALLSACRTYG----- 216
L G L EA+ L V++ ++D VPL A ACR +
Sbjct: 707 LCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPL-SAYKVACRMFNRNLIP 765
Query: 217 NIDMGERLATTL 228
++ M E+L+ L
Sbjct: 766 DVKMCEKLSKRL 777
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NG+ NR +A+AL M G KPD L+ G + D +++
Sbjct: 154 LLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG 213
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKAL 116
D V A++ K G + +L + N ++ E + ++++I L + AL
Sbjct: 214 CQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDAL 273
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
LF ME G +P+ +T+ +++S + G + +L M + I PNL + ID
Sbjct: 274 NLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLVTFSALIDA 332
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLS 210
+ G L +AE+L ++ ++ + + Y +L++
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 89/185 (48%), Gaps = 5/185 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+ +V+ + +A L+ +M R + P+ F +L+ G L + + + +I
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ + V LI + K+ V+K +E+F + ++ +T ++T++I G + A
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+F+ M +G P+ +T+ +L G + + +F + + ++P++ Y I+
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL-QRSTMEPDIYTYNIMIEG 507
Query: 177 LGRAG 181
+ +AG
Sbjct: 508 MCKAG 512
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 4/161 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I G+ + R ++ + LF +M +G+ D F L+ G Q+G L + + + +++
Sbjct: 330 LITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEK----DTASWTSIICGLAMNGKTNKAL 116
+ D V L++ +G +EK+L + L++ D ++ II GL K +A
Sbjct: 390 VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSM 157
LF ++ + G KPD + +IT++S GL E KL M
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 107/224 (47%), Gaps = 7/224 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGA-LEHGRWIHDYVIEN 59
+ING + + A+ +F M+ +G++ D L++G + SG + R + D +++
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRD-MVKR 248
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTA----SWTSIICGLAMNGKTNKA 115
+I + + TALI+ + K G + ++ ++ + + ++ S+I G ++G A
Sbjct: 249 KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDA 308
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
+F+ M G PD VT+ T+++ + VE+G KLF M+ + + Y I
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT-YNTLIH 367
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNID 219
+AG L+ A+++ ++ D + Y LL G I+
Sbjct: 368 GYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIE 411
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 5/199 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+ING+ +A +F M +G PD L+TG +S +E G + +
Sbjct: 295 LINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG 354
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL 116
++ D LI Y ++G + + +VFN + + D ++ ++ L NGK KAL
Sbjct: 355 LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+ E ++K D +T+ ++ ++E LF S++ K +KP+ Y I
Sbjct: 415 VMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRK-GVKPDAIAYITMISG 473
Query: 177 LGRAGLLHEAEELVMKLPD 195
L R GL EA++L ++ +
Sbjct: 474 LCRKGLQREADKLCRRMKE 492
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 7 QFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENRIMVDTV 66
+ N+FD I L+ M+ G+ D + L+ + L + +++ V
Sbjct: 91 KMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIV 150
Query: 67 VGTALIEMYAKSGCVEKSLEVFNGLK----EKDTASWTSIICGLAMNGKTNKALELFEAM 122
+L+ + + ++++ + + + + + ++I GL N N ALE+F M
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 210
Query: 123 EKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRAGL 182
EK G + D VT+ T++S S++G + +L M K I PN+ + ID + G
Sbjct: 211 EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM-VKRKIDPNVIFFTALIDTFVKEGN 269
Query: 183 LHEAEELVMKLPDQTDEIIVPLYGALLS 210
L EA L ++ ++ V Y +L++
Sbjct: 270 LLEARNLYKEMIRRSVVPNVFTYNSLIN 297
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 7/207 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY + + +EA+ F M+ GV P+ F+ +L+ G ++ + D + E
Sbjct: 537 IVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFG 596
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKAL 116
+ D V + L+ ++ G +++ E++ + E D +++ + G A G+ KA
Sbjct: 597 VKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAE 656
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
++ M K G +P+ V + ++S AG +++ +++ M + PNL Y I
Sbjct: 657 QILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWG 716
Query: 177 LGRAGLLHEAEELVMKLPDQTDEIIVP 203
G A +AEEL L D + +VP
Sbjct: 717 FGEAKQPWKAEEL---LKDMEGKNVVP 740
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 83/193 (43%), Gaps = 31/193 (16%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NG ++ R EA ++F + G KP L+T AL + H
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVT------ALTRQKHFH------- 371
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
+L+ + +K VEK NGLK DT + +II + +G ++A+++FE
Sbjct: 372 ---------SLLSLISK---VEK-----NGLKP-DTILFNAIINASSESGNLDQAMKIFE 413
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M++ G KP TF T++ G +EE +L M ++PN +
Sbjct: 414 KMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQ 473
Query: 181 GLLHEAEELVMKL 193
+ EA +V K+
Sbjct: 474 RKIEEAWNIVYKM 486
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 113/229 (49%), Gaps = 7/229 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGAL-EHGRWIHDYVIEN 59
+I+G+ + A F +M R + PD A+++G Q G + E G+ H+ +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKA 115
+ D+V T LI Y K+G ++ + V N + + + ++T++I GL G + A
Sbjct: 417 -LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
EL M K+G +P+ T+ ++++ +G +EE KL + + + Y +D
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMD 534
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
++G + +A+E++ ++ + + + + L++ +G ++ GE+L
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ Q EA LF +M +G++PD L+ G ++G ++ +H+++I+
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKAL 116
+ V T LI+ K G ++ + E+ + + + + ++ SI+ GL +G +A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+L E G D VT+ T++ A +G +++ +++ M K ++P + + ++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNG 570
Query: 177 LGRAGLLHEAEELV 190
G+L + E+L+
Sbjct: 571 FCLHGMLEDGEKLL 584
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY +F D+ L M+ +G+KP+ +I +++ + L +I
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I+ DTVV T LI+ G G A + F
Sbjct: 347 ILPDTVVYTTLID-------------------------------GFCKRGDIRAASKFFY 375
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M PD +T+ ++S G + E KLFH M K ++P+ + I+ +A
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKA 434
Query: 181 GLLHEA 186
G + +A
Sbjct: 435 GHMKDA 440
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 113/229 (49%), Gaps = 7/229 (3%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGAL-EHGRWIHDYVIEN 59
+I+G+ + A F +M R + PD A+++G Q G + E G+ H+ +
Sbjct: 357 LIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG 416
Query: 60 RIMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKE----KDTASWTSIICGLAMNGKTNKA 115
+ D+V T LI Y K+G ++ + V N + + + ++T++I GL G + A
Sbjct: 417 -LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 116 LELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFID 175
EL M K+G +P+ T+ ++++ +G +EE KL + + + Y +D
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA-GLNADTVTYTTLMD 534
Query: 176 LLGRAGLLHEAEELVMKLPDQTDEIIVPLYGALLSACRTYGNIDMGERL 224
++G + +A+E++ ++ + + + + L++ +G ++ GE+L
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 99/194 (51%), Gaps = 5/194 (2%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
+I+G+ Q EA LF +M +G++PD L+ G ++G ++ +H+++I+
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG 451
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGL----KEKDTASWTSIICGLAMNGKTNKAL 116
+ V T LI+ K G ++ + E+ + + + + ++ SI+ GL +G +A+
Sbjct: 452 CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAV 511
Query: 117 ELFEAMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDL 176
+L E G D VT+ T++ A +G +++ +++ M K ++P + + ++
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNVLMNG 570
Query: 177 LGRAGLLHEAEELV 190
G+L + E+L+
Sbjct: 571 FCLHGMLEDGEKLL 584
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 73/186 (39%), Gaps = 32/186 (17%)
Query: 1 MINGYVQFNRFDEAIALFGDMQVRGVKPDKFIVVALLTGCAQSGALEHGRWIHDYVIENR 60
++NGY +F D+ L M+ +G+KP+ +I +++ + L +I
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346
Query: 61 IMVDTVVGTALIEMYAKSGCVEKSLEVFNGLKEKDTASWTSIICGLAMNGKTNKALELFE 120
I+ DTVV T LI+ G G A + F
Sbjct: 347 ILPDTVVYTTLID-------------------------------GFCKRGDIRAASKFFY 375
Query: 121 AMEKLGAKPDDVTFITVLSACSHAGLVEEGRKLFHSMSSKYHIKPNLEHYGCFIDLLGRA 180
M PD +T+ ++S G + E KLFH M K ++P+ + I+ +A
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK-GLEPDSVTFTELINGYCKA 434
Query: 181 GLLHEA 186
G + +A
Sbjct: 435 GHMKDA 440