Miyakogusa Predicted Gene
- Lj0g3v0263879.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0263879.1 Non Chatacterized Hit- tr|I3T3F4|I3T3F4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,54.33,0,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; PPR: pentatricopeptide
,CUFF.17391.1
(492 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 381 e-106
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 2e-87
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 7e-51
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 141 9e-34
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 141 9e-34
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 141 9e-34
AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 3e-33
AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 5e-31
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 5e-26
AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 72 1e-12
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 9e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 1e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 68 2e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 65 9e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 64 2e-10
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 62 1e-09
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 61 2e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 9e-09
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 57 2e-08
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 57 4e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 56 7e-08
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 54 3e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 53 4e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 50 3e-06
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 50 3e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 49 7e-06
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 8e-06
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 381 bits (978), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/437 (43%), Positives = 289/437 (66%), Gaps = 7/437 (1%)
Query: 24 PIDTLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEW 83
P DTL R++R+GDP+ + +L+ W+ +G + +L IK LR F RF HALQIS+W
Sbjct: 36 PYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQISDW 95
Query: 84 MSDERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSV 143
MS+ R H + GD+AIRLDLI+KV GL EAEK+F +IP R++ +YGA LNC+A +
Sbjct: 96 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 155
Query: 144 EKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TL 202
KAE + Q +KE + L YNVM+ LY RTG+Y + L+REM+++ + + T+
Sbjct: 156 HKAEQVFQEMKELGFLKG---CLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTV 212
Query: 203 NTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSE 262
NT L A ++D++ MEK L + E D +DW TY A+GY +A EK+L ML+KSE
Sbjct: 213 NTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSE 272
Query: 263 KLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVD 322
+++ + + AYE L++ Y A GKK++VYR+W++ K L+ N+ YIS+++ALL+++D++
Sbjct: 273 QMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIE 332
Query: 323 GAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLA 382
E+I+EEWE+G++ DIRIP+LL+ YC+ G++EKAE + L+++ D S W+RLA
Sbjct: 333 EVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLA 392
Query: 383 SGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGER 442
GY M+KAVE K+AI +PGW+ + L C+++L+ +RD E +ILRL ER
Sbjct: 393 LGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSER 452
Query: 443 GYFTAATHDRLLSYVHG 459
G+ ++D+LL ++G
Sbjct: 453 GHI---SYDQLLYDMNG 466
>AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926535-8927722 FORWARD
LENGTH=395
Length = 395
Score = 319 bits (818), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/377 (42%), Positives = 250/377 (66%), Gaps = 7/377 (1%)
Query: 84 MSDERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSV 143
MS+ R H + GD+AIRLDLI+KV GL EAEK+F +IP R++ +YGA LNC+A +
Sbjct: 1 MSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVL 60
Query: 144 EKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TL 202
KAE + Q +KE + L YNVM+ LY RTG+Y + L+REM+++ + + T+
Sbjct: 61 HKAEQVFQEMKELGFLKG---CLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTV 117
Query: 203 NTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSE 262
NT L A ++D++ MEK L + E D +DW TY A+GY +A EK+L ML+KSE
Sbjct: 118 NTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSE 177
Query: 263 KLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVD 322
+++ + + AYE L++ Y A GKK++VYR+W++ K L+ N+ YIS+++ALL+++D++
Sbjct: 178 QMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTGYISVISALLKMDDIE 237
Query: 323 GAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLA 382
E+I+EEWE+G++ DIRIP+LL+ YC+ G++EKAE + L+++ D S W+RLA
Sbjct: 238 EVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLA 297
Query: 383 SGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGER 442
GY M+KAVE K+AI +PGW+ + L C+++L+ +RD E +ILRL ER
Sbjct: 298 LGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSER 357
Query: 443 GYFTAATHDRLLSYVHG 459
G+ ++D+LL ++G
Sbjct: 358 GHI---SYDQLLYDMNG 371
>AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:408779-410433 FORWARD
LENGTH=524
Length = 524
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 245/425 (57%), Gaps = 14/425 (3%)
Query: 26 DTLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMS 85
+ ++ +IS P + +LNQW + GR + +L +K+LR ++R AL++ +WM+
Sbjct: 67 NAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRANQALEVYDWMN 126
Query: 86 DERNHY-LHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVE 144
+ + L + D AI+LDLI KVRG+ +AE++F +PE +D +VYG+ LN + + S E
Sbjct: 127 NRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLLNAYVRAKSRE 186
Query: 145 KAEAIMQRIKEYPSMPAKGLAL---SYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHV 200
KAEA++ +++ KG AL +NVMM LY +Y+K+ ++ EMK+K++ +
Sbjct: 187 KAEALLNTMRD------KGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIRLDIY 240
Query: 201 TLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKK 260
+ N WLS+C ++ +++ME + QM+ D +W T+ T A Y + + EK+ L+K
Sbjct: 241 SYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAEDALRK 300
Query: 261 SEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHS-RNSSYISMLTALLRLN 319
E I G+ R+ Y YLL+ Y ++G K ++YR+W++ K++ S N Y +++++L+R+
Sbjct: 301 VEARITGR-NRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLVRMG 359
Query: 320 DVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWD 379
D++GAE++ EEW + D RIPNLL+ Y +N LE AE ++E K S W+
Sbjct: 360 DIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSSTWE 419
Query: 380 RLASGYCRCKDMDKAVETLKKAILA-GRPGWKAYPFTLAQCIEHLKEKRDSELASEILRL 438
LA G+ R + + +A+ L+ A A G W+ L+ + +E+ D +L L
Sbjct: 420 ILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAVLEL 479
Query: 439 CGERG 443
+ G
Sbjct: 480 LRQSG 484
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/419 (32%), Positives = 231/419 (55%), Gaps = 12/419 (2%)
Query: 26 DTLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMS 85
+ L+ R+ + G + V LNQ+++ + + ++ IK+LR+ + AL++SE M
Sbjct: 23 EPLYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM- 81
Query: 86 DERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEK 145
+ER D AI LDL++K R + E YF +PETS+ YG+ LNC+ + EK
Sbjct: 82 EERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEK 141
Query: 146 AEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNT 204
AE ++ ++KE P+ ++SYN +M LY +TG+ EK+ +++E+K +N+ + T N
Sbjct: 142 AEGLLNKMKELNITPS---SMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNV 198
Query: 205 WLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSE-K 263
W+ A NDI +E+++ +M D R DW TY A Y A +K+ L++ E K
Sbjct: 199 WMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMK 258
Query: 264 LIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCK-NLNHSRNSSYISMLTALLRLNDVD 322
Q T AY++L+T Y +GK +VYRIW + + + N +Y++M+ L++LND+
Sbjct: 259 NTQRDFT--AYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLP 316
Query: 323 GAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLA 382
GAE + +EW++ + DIRI N+L+ Y + GL++KA + R K + W+
Sbjct: 317 GAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFM 376
Query: 383 SGYCRCKDMDKAVETLKKAILAGRPG---WKAYPFTLAQCIEHLKEKRDSELASEILRL 438
Y + DM +A+E + KA+ G+ W P T+ + + ++K+D A +L +
Sbjct: 377 DYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEI 435
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 227/410 (55%), Gaps = 7/410 (1%)
Query: 46 LNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIRLDLIS 105
+ +W +EG + +L +++LR +R+KHAL+I EWM + + L +GD A+ LDLIS
Sbjct: 81 IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQEDIKLQAGDYAVHLDLIS 140
Query: 106 KVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLA 165
K+RGL AEK+F +P+ R + L+ + Q+ +KAEA+ +++ E + +
Sbjct: 141 KIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKS---C 197
Query: 166 LSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQM 225
L YN M+ +Y GQ+EK+ L++E+K + + VT N WL+A + ND++ EK+ +
Sbjct: 198 LPYNHMLSMYISRGQFEKVPVLIKELKIRTSPDIVTYNLWLTAFASGNDVEGAEKVYLKA 257
Query: 226 EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIG 285
+ + + DW TY + Y + D EK+ LK+ EKL+ K RVAY L++ +A +G
Sbjct: 258 K-EEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKK-NRVAYASLISLHANLG 315
Query: 286 KKDDVYRIWNMCK-NLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPN 344
KD V W K + ++ Y+SM++A+++L + + A+ + +EWES + D RIPN
Sbjct: 316 DKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPN 375
Query: 345 LLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILA 404
L++ Y + E R++E+ I S W+ L Y + KDM+K ++ KAI +
Sbjct: 376 LILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAIDS 435
Query: 405 GRPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERGYFTAATHDRLL 454
+ W + + L+E+ + + A +++ L + GY ++ LL
Sbjct: 436 VKK-WTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484
>AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11533257-11534817 REVERSE
LENGTH=492
Length = 492
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 124/378 (32%), Positives = 214/378 (56%), Gaps = 6/378 (1%)
Query: 27 TLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSD 86
TL+ +IS GDP V P L WVQ G+ ++ +L + LR +RF HAL++S+WM++
Sbjct: 26 TLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSKWMNE 85
Query: 87 ERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKA 146
+ A+ LDLI +V G AE+YF ++ E ++ K YGA LNC+ + +VEK+
Sbjct: 86 TGVCVFSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQNVEKS 145
Query: 147 EAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTW 205
+++KE + + +L+YN +M LY GQ+EK+ ++ EMKE+N+ ++ +
Sbjct: 146 LLHFEKMKEMGFVTS---SLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYRIC 202
Query: 206 LSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLI 265
++A + D++ + L ME T+DW TY AA Y ++++ +LK SE +
Sbjct: 203 INAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSENRL 262
Query: 266 QGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSR-NSSYISMLTALLRLNDVDGA 324
+ K Y +L+T YA +GKK +V R+W++ K++ R N Y+++L +L++++ + A
Sbjct: 263 EKKDGE-GYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVEA 321
Query: 325 ERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASG 384
E ++ EW+S C D R+PN ++R Y + EKAEA + L R W+ +A+
Sbjct: 322 EEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVATA 381
Query: 385 YCRCKDMDKAVETLKKAI 402
Y ++ A + +K A+
Sbjct: 382 YAEKGTLENAFKCMKTAL 399
>AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9693262-9694815 REVERSE
LENGTH=491
Length = 491
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 234/436 (53%), Gaps = 18/436 (4%)
Query: 16 RLFSSYSSPIDTLFL-------RISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQL 68
RL SS + DT + I R P VT LL + + G ++ +L+ K+L
Sbjct: 21 RLVSSLADGSDTSSVANRNSLKEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRL 80
Query: 69 RSFRRFKHALQISEWMSDERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFK 128
R+ ALQ+ EWM ++++ DIA+RLDLI K GL++ E+YF + +S +
Sbjct: 81 IRSNRYDLALQMMEWMENQKDIEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMR 140
Query: 129 V----YGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKL 184
V Y L + ++ V++AEA+M+++ + +N MM LY +GQYEK+
Sbjct: 141 VAKSAYLPLLRAYVKNKMVKEAEALMEKLNGLGFLVTPH---PFNEMMKLYEASGQYEKV 197
Query: 185 HDLMREMKEKNLCNHV-TLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAAD 243
++ MK + +V + N W++AC ++ + +E + +M D V W + CT A+
Sbjct: 198 VMVVSMMKGNKIPRNVLSYNLWMNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLAN 257
Query: 244 GYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNL-NH 302
Y ++ EK+ +L+ +EK++ + R+ Y +L+T YA++G K+ V R+W + K++
Sbjct: 258 VYIKSGFDEKARLVLEDAEKMLN-RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGR 316
Query: 303 SRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEAC 362
+YI +L++L++ D++ AER+ EWE+ D+R+ N+L+ Y NG + KAE+
Sbjct: 317 ISCVNYICVLSSLVKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESL 376
Query: 363 IARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKA-ILAGRPGWKAYPFTLAQCIE 421
+LER + W+ L G+ +C++M+KA++ + + +L R W+ + E
Sbjct: 377 HGCVLERGGTPNYKTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAE 436
Query: 422 HLKEKRDSELASEILR 437
+ +++ E A+ +R
Sbjct: 437 YFEKEEKIEEATAYVR 452
>AT1G28020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:9768395-9771157 REVERSE
LENGTH=612
Length = 612
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 120/328 (36%), Positives = 188/328 (57%), Gaps = 12/328 (3%)
Query: 42 VTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIRL 101
+ P+L QW Q+G +N ++ IK+LR + ALQ+SEWMS E+ L D A RL
Sbjct: 52 IIPVLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKEKICNLIPEDFAARL 111
Query: 102 DLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQH-SSVEKAEAIMQRIKEYPSMP 160
LI V GLEEAEK+F SIP+ +R VY + LN +A+ ++ KAEA Q++++
Sbjct: 112 HLIENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDL---- 167
Query: 161 AKGLAL---SYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDID 216
GL L YN MM LY+ EK+ +L+ EMK+ ++ ++VT+N L + D+
Sbjct: 168 --GLLLRPVPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVT 225
Query: 217 EMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEY 276
EMEK L + E ++W T A Y RA K++ ML+ +E+L+ K + AY++
Sbjct: 226 EMEKFLNKWEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDH 285
Query: 277 LLTRYAAIGKKDDVYRIWNMCKN-LNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGN 335
L+ Y G +++V R+W + K+ + N+ Y +++ +LL+++D+ GAE I + WES
Sbjct: 286 LMKLYGEAGNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLP 345
Query: 336 TCKDIRIPNLLVRMYCENGLLEKAEACI 363
D RIP +L Y + G+ EKAE +
Sbjct: 346 LEFDHRIPTMLASGYRDRGMTEKAEKLM 373
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 4/149 (2%)
Query: 41 PVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIR 100
PVTPLL QW + +P DL+ IK LR ++F ALQ+SEWM +++ L+ D A R
Sbjct: 386 PVTPLLEQWGDQMKP---SDLKCLIKNLRDSKQFSKALQVSEWMGEKQVCNLYLEDYAAR 442
Query: 101 LDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMP 160
L L V GLEEAEKYF +IPE +D+ VY A L+ +A+ S + + ++E
Sbjct: 443 LYLTENVLGLEEAEKYFENIPENMKDYSVYVALLSSYAK-SDKNLGNMVDEILREMEENN 501
Query: 161 AKGLALSYNVMMGLYARTGQYEKLHDLMR 189
++ N ++ +YA + + + MR
Sbjct: 502 VDPDLITVNHVLKVYAAESKIQAMEMFMR 530
>AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:871268-872885 REVERSE
LENGTH=502
Length = 502
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 217/416 (52%), Gaps = 17/416 (4%)
Query: 46 LNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSG-DIAIRLDLI 104
LNQ+V EG P+ DL + K LR FR+ + AL+I EWM ER +G D AIRL+LI
Sbjct: 60 LNQFVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWM--ERKEIAFTGSDHAIRLNLI 117
Query: 105 SKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGL 164
+K +GLE AE YF S+ ++ ++ YG+ LNC+ KA+A + + + +
Sbjct: 118 AKSKGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSN--- 174
Query: 165 ALSYNVMMGLYARTGQYEKLHDLMREMKEKNL--CNHVTLNTWLSACVTINDIDEMEKIL 222
+L +N +M +Y GQ EK+ L+ MKEK++ C+ +T + W+ +C ++ D+D +EK+L
Sbjct: 175 SLPFNNLMAMYMGLGQPEKVPALVVAMKEKSITPCD-ITYSMWIQSCGSLKDLDGVEKVL 233
Query: 223 AQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYA 282
+M+ + W T+ A Y + + K+ LK E + V R Y +L+ Y
Sbjct: 234 DEMKAEGEGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDV-RDCYHFLINLYT 292
Query: 283 AIGKKDDVYRIWNMCK----NLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCK 338
I +VYR+W++ K N+N NSSY++ML AL +L+D+DG +++ EWES
Sbjct: 293 GIANASEVYRVWDLLKKRYPNVN---NSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTY 349
Query: 339 DIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETL 398
D+R+ N+ + Y + + E+AEA +++ L + D A++
Sbjct: 350 DMRMANVAISSYLKQNMYEEAEAVFNGAMKKCKGQFSKARQLLMMHLLKNDQADLALKHF 409
Query: 399 KKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERGYFTAATHDRLL 454
+ A+L W ++ H +E +D + A E + + ++ T+ L+
Sbjct: 410 EAAVLDQDKNWTWSSELISSFFLHFEEAKDVDGAEEFCKTLTKWSPLSSETYTLLM 465
>AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:474516-476383 FORWARD
LENGTH=537
Length = 537
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/337 (34%), Positives = 187/337 (55%), Gaps = 10/337 (2%)
Query: 28 LFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDE 87
L+ ++S V LNQ++ EG + DL K LR FRR +HA +I +WM ++
Sbjct: 73 LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWM-EK 131
Query: 88 RNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFK-VYGAFLNCHAQHSSVEKA 146
R D AI LDLI K +GLE AE YF ++ ++++ + YGA +NC+ EKA
Sbjct: 132 RKMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEKA 191
Query: 147 EAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL--CNHVTLNT 204
+A + + E + +L +N MM +Y R Q EK+ L+ MK++ + C VT +
Sbjct: 192 KAHFEIMDELNFV---NNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCG-VTYSI 247
Query: 205 WLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKL 264
W+ +C ++ND+D +EKI+ +M D A W T+ A YT+A +EK+ + LK E+
Sbjct: 248 WMQSCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEK 307
Query: 265 IQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLNDVDG 323
+ R ++ +L++ YA I K +VYR+W K N+ SY+ ML A+ +L D+DG
Sbjct: 308 MNPN-NRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDG 366
Query: 324 AERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAE 360
++I EWES D+R+ N+ + Y + + E+AE
Sbjct: 367 IKKIFTEWESKCWAYDMRLANIAINTYLKGNMYEEAE 403
>AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2941864-2943324 FORWARD
LENGTH=409
Length = 409
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/316 (32%), Positives = 170/316 (53%), Gaps = 6/316 (1%)
Query: 26 DTLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMS 85
D L RI R P T +L +W+ EG + +L+ K+LR RR+KHAL+++EWM
Sbjct: 55 DDLKSRIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMV 114
Query: 86 DERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEK 145
+ D A R+DLISKV G++ AE+YF + S+ + Y + L+ +A E+
Sbjct: 115 QHEESKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTER 174
Query: 146 AEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TLNT 204
AEA+ +RI E S+ A++YN MM LY GQ EK+ +++ +K+K + + T N
Sbjct: 175 AEALFKRIIESDSLTFG--AITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNL 232
Query: 205 WLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLK-KSEK 263
WLS+C +IDE+ KIL +M D + W Y Y + + + + L ++EK
Sbjct: 233 WLSSCAATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEK 292
Query: 264 LIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLNDVD 322
I + + Y++L+ + +G K + +IW +N N +S SYI +L++ L L +
Sbjct: 293 SISQR-EWITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLR 351
Query: 323 GAERIVEEWESGNTCK 338
AE I+ +W+ T +
Sbjct: 352 EAEEIIHQWKESKTTE 367
>AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 192/366 (52%), Gaps = 11/366 (3%)
Query: 38 PAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDI 97
P + + L++WV+EG I ++ + QLR R + ALQ+SEW+ + + D
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 98 AIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFL-NCHAQHSSVEKAEAIMQRIKEY 156
A RLDL K+RGLE+ E IP++ + +Y L NC A +V+K+E + ++K+
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA-AGNVKKSELVFNKMKDL 258
Query: 157 PSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDI 215
P G + + M+ L+ R + +K+ D++ M+++N+ + +T + NDI
Sbjct: 259 -GFPLSG--FTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDI 314
Query: 216 DEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYE 275
ME+IL M+ D +D+ T A Y+ A +K+ +LK+ E + R A++
Sbjct: 315 SGMEQILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGE-SLEANRRAFK 372
Query: 276 YLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGN 335
LL+ YA++G++D+V RIW +C++ + S ++ + A +LN V AE I E+ +
Sbjct: 373 DLLSIYASLGREDEVKRIWKICESKPYFEES--LAAIQAFGKLNKVQEAEAIFEKIVKMD 430
Query: 336 TCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAV 395
++L+R+Y ++ +L K + + R+ E + + + WD L Y +++KA
Sbjct: 431 RRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKAD 490
Query: 396 ETLKKA 401
L KA
Sbjct: 491 SLLDKA 496
>AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 192/366 (52%), Gaps = 11/366 (3%)
Query: 38 PAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDI 97
P + + L++WV+EG I ++ + QLR R + ALQ+SEW+ + + D
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 98 AIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFL-NCHAQHSSVEKAEAIMQRIKEY 156
A RLDL K+RGLE+ E IP++ + +Y L NC A +V+K+E + ++K+
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA-AGNVKKSELVFNKMKDL 258
Query: 157 PSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDI 215
P G + + M+ L+ R + +K+ D++ M+++N+ + +T + NDI
Sbjct: 259 -GFPLSG--FTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDI 314
Query: 216 DEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYE 275
ME+IL M+ D +D+ T A Y+ A +K+ +LK+ E + R A++
Sbjct: 315 SGMEQILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGE-SLEANRRAFK 372
Query: 276 YLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGN 335
LL+ YA++G++D+V RIW +C++ + S ++ + A +LN V AE I E+ +
Sbjct: 373 DLLSIYASLGREDEVKRIWKICESKPYFEES--LAAIQAFGKLNKVQEAEAIFEKIVKMD 430
Query: 336 TCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAV 395
++L+R+Y ++ +L K + + R+ E + + + WD L Y +++KA
Sbjct: 431 RRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKAD 490
Query: 396 ETLKKA 401
L KA
Sbjct: 491 SLLDKA 496
>AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 |
chr1:30181265-30183331 FORWARD LENGTH=596
Length = 596
Score = 141 bits (356), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 192/366 (52%), Gaps = 11/366 (3%)
Query: 38 PAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDI 97
P + + L++WV+EG I ++ + QLR R + ALQ+SEW+ + + D
Sbjct: 140 PGLSIGSALDKWVEEGNEITRVEIAKAMLQLRRRRMYGRALQMSEWLEANKKIEMTERDY 199
Query: 98 AIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFL-NCHAQHSSVEKAEAIMQRIKEY 156
A RLDL K+RGLE+ E IP++ + +Y L NC A +V+K+E + ++K+
Sbjct: 200 ASRLDLTVKIRGLEKGEACMQKIPKSFKGEVLYRTLLANCVA-AGNVKKSELVFNKMKDL 258
Query: 157 PSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDI 215
P G + + M+ L+ R + +K+ D++ M+++N+ + +T + NDI
Sbjct: 259 -GFPLSG--FTCDQMLLLHKRIDR-KKIADVLLLMEKENIKPSLLTYKILIDVKGATNDI 314
Query: 216 DEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYE 275
ME+IL M+ D +D+ T A Y+ A +K+ +LK+ E + R A++
Sbjct: 315 SGMEQILETMK-DEGVELDFQTQALTARHYSGAGLKDKAEKVLKEMEGE-SLEANRRAFK 372
Query: 276 YLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGN 335
LL+ YA++G++D+V RIW +C++ + S ++ + A +LN V AE I E+ +
Sbjct: 373 DLLSIYASLGREDEVKRIWKICESKPYFEES--LAAIQAFGKLNKVQEAEAIFEKIVKMD 430
Query: 336 TCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAV 395
++L+R+Y ++ +L K + + R+ E + + + WD L Y +++KA
Sbjct: 431 RRASSSTYSVLLRVYVDHKMLSKGKDLVKRMAESGCRIEATTWDALIKLYVEAGEVEKAD 490
Query: 396 ETLKKA 401
L KA
Sbjct: 491 SLLDKA 496
>AT3G11380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3564079-3565779 FORWARD
LENGTH=541
Length = 541
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 166/316 (52%), Gaps = 41/316 (12%)
Query: 57 NHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIRLDLISKVRGLEEAEKY 116
N L+ +++LRS R + AL++S+WM +++ + L D + R L KV LEEAEK+
Sbjct: 74 NPSLLRGIVEKLRSSNRPRQALEVSDWMVEQKMYNLPE-DFSARFHLTEKVLNLEEAEKF 132
Query: 117 FWSIPETSRDFKVYGAFLNCHAQHS---SVEKAEAIMQRIKEYPSMPAKGLALSYNVMMG 173
F SIPE R +Y + L +A+ S +++KAE++ +++K+ + YN M
Sbjct: 133 FESIPENMRFESMYNSLLRSYARQSGEKALKKAESVFKKMKKLGLLLRPS---PYNSMTS 189
Query: 174 LYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRAT 232
LY+ G +K+ +++REMKE N+ ++VT+N L ++D+ M+K LA +
Sbjct: 190 LYSSLGNRDKVDEILREMKENNVELDNVTVNNALRVYAAVSDVATMDKFLADRK------ 243
Query: 233 VDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYR 292
T DG T LAM K AYE L++ Y G+ +DV+R
Sbjct: 244 -----EITRLDGLTM-------LAMAK-------------AYE-LMSLYGEAGEIEDVHR 277
Query: 293 IWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERI-VEEWESGNTCKDIRIPNLLVRMYC 351
+W+ K N + +++ +LL+L D GAE+I EWE D RIP++LV Y
Sbjct: 278 VWDKYKATRQKDNEEFRTLIGSLLKLGDTKGAEKIYYNEWECSGLEFDNRIPDMLVSGYR 337
Query: 352 ENGLLEKAEACIARLL 367
E G++ KA+ + + L
Sbjct: 338 EKGMVMKADKLVNKTL 353
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 6/186 (3%)
Query: 39 AIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIA 98
A P+T LL + ++G ++ L+ IK LR + AL+ S WM ++ L S D A
Sbjct: 359 ATPITLLLEEMDKKGNKVSPPGLRDLIKNLRDSNQLSKALEASTWMCQKKVFNLFSEDYA 418
Query: 99 IRLDLISKVRGLEEAEKYF-WSIPETSRDFKVYGAFLNCHAQHSSVE-KAEAIMQRIKEY 156
RL L KV GLEEAE +F SIPE +D+ VY L+C+A+ S+ + KAEA+ ++++E
Sbjct: 419 TRLHLTEKVLGLEEAENFFESSIPENMKDYSVYDTLLSCYARSSNTQSKAEAVFEKMRE- 477
Query: 157 PSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDI 215
+ + +N ++ LY+ G+ ++ L+ +MK KN+ + VT N L A I I
Sbjct: 478 --LGLQSKLSPFNSLISLYSGQGKLSVVNILLCDMKHKNIEPDIVTRNNVLRANAYILAI 535
Query: 216 DEMEKI 221
D MEK+
Sbjct: 536 DSMEKV 541
>AT1G28000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9756674-9757947 REVERSE
LENGTH=388
Length = 388
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 149/293 (50%), Gaps = 23/293 (7%)
Query: 14 TLRLFSSYSSPI--DTLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSF 71
++R + +SP +T RI G VTP L++W++ G+ +N L+ I L
Sbjct: 19 SIRFAGTLTSPKLNETSHSRIMALGREQKKVTPPLDEWLKRGKDLNPAVLRGLINSLCES 78
Query: 72 RRFKHALQISEWMSDERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYG 131
+RF HALQ+SEW++ L + D A RL L+ GL+EAEK+F SIPE RD V+
Sbjct: 79 QRFNHALQVSEWITKRGIFDLSTEDFASRLCLVEISTGLKEAEKFFKSIPENMRDDSVHT 138
Query: 132 AFLNCHA-QHSSVEKAEAIMQR-------IKEYPSMPAKGLALSYNVMMGLYARTGQYEK 183
L+ + + +AEA Q +K YP Y M+ LYA G+
Sbjct: 139 TLLSLYTISKKTRHEAEATYQTMRVQNMLLKPYP----------YYSMIYLYALLGEKNM 188
Query: 184 LHDLMREMKEKNLCN--HVTLNTWLSACVTINDIDEMEKILAQMEV-DPRATVDWFTYCT 240
+ +++R+MKE + + ++T N L A ++ D++ ME L +EV +PR ++ W T +
Sbjct: 189 IDEILRQMKENGVEHDKNLTANNVLKAYASLPDVEAMEMFLMGLEVEEPRFSLAWQTGIS 248
Query: 241 AADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRI 293
A Y + K++ ML+++E ++ K A + L+ Y G K D R+
Sbjct: 249 IAKAYLKGGSSRKAVEMLRRTELVVDTKSKDSANKVLMMMYWDAGAKQDASRL 301
>AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5318307-5320422 FORWARD
LENGTH=594
Length = 594
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 219/448 (48%), Gaps = 31/448 (6%)
Query: 39 AIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIA 98
+ V L++WV++G+ N + + + QLR R F ALQ++EW+ + + + D A
Sbjct: 139 GLSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDENKQFEMEERDYA 198
Query: 99 IRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPS 158
RLDLISKVRG + E Y +IPE+ R VY L H S+V AEA+ ++K+
Sbjct: 199 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDL-- 256
Query: 159 MPAKGLALSY---NVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTW---LSACVTI 212
G LS N M+ LY R + +K+ D++ ++++NL + LNT+ + +
Sbjct: 257 ----GFPLSTFTCNQMLILYKRVDK-KKIADVLLLLEKENLKPN--LNTYKILIDTKGSS 309
Query: 213 NDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLK--KSEKLIQGKVT 270
NDI ME+I+ M+ + +D A Y A EK+ +LK + E L +
Sbjct: 310 NDITGMEQIVETMKSEG-VELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEE---N 365
Query: 271 RVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEE 330
R + LL+ Y + ++D+V R+W +C+ + R + ++ + A +++ V AE + E+
Sbjct: 366 RHMCKDLLSVYGYLQREDEVRRVWKICE--ENPRYNEVLAAILAFGKIDKVKDAEAVFEK 423
Query: 331 WESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKD 390
+ + ++L+R+Y ++ ++ + + + ++ + WD + Y +
Sbjct: 424 VLKMSHRVSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGE 483
Query: 391 MDKAVETLKKAILAG--RPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERGYFTA- 447
++KA +L KAI + +P ++ + + + + + D +I + + GY +
Sbjct: 484 VEKAESSLSKAIQSKQIKPLMSSFMYLMHEYV----RRGDVHNTEKIFQRMKQAGYQSRF 539
Query: 448 -ATHDRLLSYVHGEIPEANALDLIDEDN 474
A + +YV+ + P + + DN
Sbjct: 540 WAYQTLIQAYVNAKAPAYGMKERMKADN 567
>AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2336649-2338481 REVERSE
LENGTH=534
Length = 534
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 191/419 (45%), Gaps = 22/419 (5%)
Query: 24 PIDTLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEW 83
P L LRI + + V L W+ +G P++ GD+ I +LR R K AL++ EW
Sbjct: 64 PNKCLSLRIEKL-PKGVTVGSALQSWMGDGFPVHGGDVYHAINRLRKLGRNKRALELMEW 122
Query: 84 MSDERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSV 143
+ ER + L + + L+ K+ G+ + EK F +P+ ++ +Y + +
Sbjct: 123 IIRERPYRLGELEYSYLLEFTVKLHGVSQGEKLFTRVPQEFQNELLYNNLVIACLDQGVI 182
Query: 144 EKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TL 202
A M++++E + + L YN ++ + G+ + + + MK HV T
Sbjct: 183 RLALEYMKKMRE---LGYRTSHLVYNRLIIRNSAPGRRKLIAKDLALMKADKATPHVSTY 239
Query: 203 NTWLSACVTINDIDEMEKILAQME---VDPRATVDWFTYCTAADGYTRADQFEKSLAMLK 259
+ + ++ID + K M+ V+P + +YC A + A + + A +
Sbjct: 240 HILMKLEANEHNIDGVLKAFDGMKKAGVEP----NEVSYCILAMAHAVARLYTVAEAYTE 295
Query: 260 KSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLN 319
+ EK I G + L+ Y +GK+ ++ R WN+ + +H R+ SY+ A R+
Sbjct: 296 EIEKSITGD-NWSTLDILMILYGRLGKEKELARTWNVIRGFHHVRSKSYLLATEAFARVG 354
Query: 320 DVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWD 379
++D AE + E ++ K+ N L+ +YC++GL+EKA + K + +
Sbjct: 355 NLDRAEELWLEMKNVKGLKETEQFNSLLSVYCKDGLIEKAIGVFREMTGNGFKPNSITYR 414
Query: 380 RLASGYCRCKDMDKAVETLK--------KAILAGRPGWKAYPFTLAQCIEHLKEKRDSE 430
LA G + K M +A++ ++ K+I + P W ++ +C + +SE
Sbjct: 415 HLALGCAKAKLMKEALKNIEMGLNLKTSKSIGSSTP-WLETTLSIIECFAEKGDVENSE 472
>AT3G15590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5275568-5277658 REVERSE
LENGTH=610
Length = 610
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 201/453 (44%), Gaps = 47/453 (10%)
Query: 42 VTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIRL 101
V +L +WV+EG+ ++ ++ I LR + + LQ+ EW+ + A +L
Sbjct: 157 VKHVLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLGANTQFEFTEANYASQL 216
Query: 102 DLISKVRGLEEAEKYFWSIPETSRDFKVYGAFL-NCHAQHSSVEKAEAIMQRIKEYPSMP 160
DL++KV L++AE + IPE+SR VY L NC +H V KAE I ++KE P
Sbjct: 217 DLVAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKH-HVNKAEDIFNKMKEL-KFP 274
Query: 161 AKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEME 219
A N ++ LY+ + +K+ D++ M+ +N+ + T + +++ DI ME
Sbjct: 275 TSVFAC--NQLLLLYSMHDR-KKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGME 331
Query: 220 KILAQ-----MEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGK---VTR 271
KI+ +E+DP A Y RA E++ ++K+ I+GK T
Sbjct: 332 KIVETIKEEGIELDPELQ------SILAKYYIRAGLKERAQDLMKE----IEGKGLQQTP 381
Query: 272 VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLN----DVDGAERI 327
LL YA IG D+V R+ + R + IS + A +L ER+
Sbjct: 382 WVCRSLLPLYADIGDSDNVRRLSRFVD--QNPRYDNCISAIKAWGKLKEVEEAEAVFERL 439
Query: 328 VEEWESGNTCKDIRIPNL-LVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYC 386
VE+++ +P L+ +Y EN +L K + R+ I S W L Y
Sbjct: 440 VEKYKIFPM-----MPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYI 494
Query: 387 RCKDMDKAVETLKKAILAG--RPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERGY 444
+ ++ KA L +A RP + Y L + KR +E + + +R
Sbjct: 495 KAGEVGKAELILNRATKDNKMRPMFTTYMAILEEY-----AKRGDVHNTEKVFMKMKRAS 549
Query: 445 FTAAT---HDRLLSYVHGEIPEANALDLIDEDN 474
+ A LL+Y++ + P ++ + DN
Sbjct: 550 YAAQLMQYETVLLAYINAKTPAYGMIERMKADN 582
>AT1G43010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:16153609-16154468 FORWARD
LENGTH=257
Length = 257
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 123/254 (48%), Gaps = 13/254 (5%)
Query: 4 RIASKLNLNNTLRL-FSSYSSPIDTLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQ 62
RI S+ N N R + + + TL RI + + PLL QW ++G +N L+
Sbjct: 13 RILSQSNRNCLFRRSYETLPAANQTLPSRIKTDINQKASIIPLLEQWRKQGYEVNPSHLR 72
Query: 63 FFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPE 122
IK L + F AL+ S+WM D A +L L++ V GLEEAEK F +IPE
Sbjct: 73 GLIKNLSDCKNFTTALEASKWMFKHSVFDNFPEDCAAQLHLVNTVLGLEEAEKMFKNIPE 132
Query: 123 TSRDFKVYGAFLNCHAQH-SSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQY 181
RD Y L+ + + +V+KAEA ++++E + L +N M+ LY + +
Sbjct: 133 KMRD---YSVLLSSYTKPVRTVDKAEATFKKMRELGFLLKPYL---FNSMICLYGQLQRL 186
Query: 182 EKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCT 240
+ + L+ ++K+ N+ + +N IN +++ + +++ ++ ++ T
Sbjct: 187 DMVEKLLYKLKKNNMEVGSLKVNNVSRVYANINAMEKFKTWVSKEGIE----LERDTIVA 242
Query: 241 AADGYTRADQFEKS 254
A Y RA EK+
Sbjct: 243 MAKAYHRAGSIEKA 256
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 139/312 (44%), Gaps = 31/312 (9%)
Query: 112 EAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVM 171
EA + F IPE D Y L+C+ ++ + EKA++ R MP K A S+N M
Sbjct: 111 EAHQLFDEIPEP--DTFSYNIMLSCYVRNVNFEKAQSFFDR------MPFKDAA-SWNTM 161
Query: 172 MGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRA 231
+ YAR G+ EK +L M EK N V+ N +S + D+++ V R
Sbjct: 162 ITGYARRGEMEKARELFYSMMEK---NEVSWNAMISGYIECGDLEKASHFFKVAPV--RG 216
Query: 232 TVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVY 291
V W T GY +A + E + AM K + V + +++ Y + +D
Sbjct: 217 VVAWTAMIT---GYMKAKKVELAEAMFKD----MTVNKNLVTWNAMISGYVENSRPEDGL 269
Query: 292 RIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAE--RIVEEWESGNT-CKDIRIPNLLVR 348
+++ NSS +S +ALL +++ + R + + S +T C D+ L+
Sbjct: 270 KLFRAMLEEGIRPNSSGLS--SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS 327
Query: 349 MYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAG-RP 407
MYC+ G L A +L E K D W+ + SGY + + DKA+ ++ I RP
Sbjct: 328 MYCKCGELGDA----WKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRP 383
Query: 408 GWKAYPFTLAQC 419
W + L C
Sbjct: 384 DWITFVAVLLAC 395
>AT2G20720.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8928009-8928908 REVERSE
LENGTH=299
Length = 299
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 141/300 (47%), Gaps = 33/300 (11%)
Query: 171 MMGLYARTGQYEKLHDLMREMKEK-----NLCNHVTLNTWLSACVTINDIDEMEKILAQM 225
M+ LY + ++ + L+ EM EK LC L ++ A V D+ +EK L++
Sbjct: 1 MLCLYHQAEDHDMVVKLLGEMDEKKMQPQGLCFVKLLTSYSMASVV--DVQGVEKFLSKW 58
Query: 226 EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIG 285
EV + W T+ Y RA EK LA+L++SE + + Y L+T Y
Sbjct: 59 EVMIQDK--WTTFYFPGLVYIRAGFMEKGLALLRRSETFVDDGCREIIYGCLMTVYCNEN 116
Query: 286 KKDDVYRIWNMCKNLNHSRNSSYIS-MLTALLRLNDVDGAERIVEEWESGNTCKDIRIPN 344
+DVYR+WN+ K+ S +SS S ++ A + D+DG ++EEW N C ++ + +
Sbjct: 117 LTEDVYRLWNLAKDYGISFDSSRCSDIVKAFTKKGDLDG---VMEEW---NECPNLDLMD 170
Query: 345 LLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGY-CRCKDMDKAVETLKKAIL 403
++ C + E+AE + L +++ K W+ LA +D D E +K +
Sbjct: 171 FGLQHRC---VKEEAEKVVDMLGKKESK-----WESLAHKVNTLVEDEDAKEEERRKRVA 222
Query: 404 AGRPG-----W---KAYPFTLAQCIEHLKEKRDSELASEILRLCGERGYFTAATHDRLLS 455
G W + + C+++++ +RD E ++ILRL +R + A LS
Sbjct: 223 EAMEGRLHDRWNPKNSMALSAFACVQYVEGRRDMESTADILRLLNKREQVSHAMDKNRLS 282
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 19/312 (6%)
Query: 69 RSFRRFKHALQISEWMSDERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPE--TSRD 126
RS R FK+ +Q W + Y I + L+ + L++ + F +P SR
Sbjct: 123 RSLRLFKY-MQRQIWCKPNEHIY------TIMISLLGREGLLDKCLEVFDEMPSQGVSRS 175
Query: 127 FKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTG-QYEKLH 185
Y A +N + ++ E + ++ R+K P+ L+YN ++ AR G +E L
Sbjct: 176 VFSYTALINAYGRNGRYETSLELLDRMKNEKISPS---ILTYNTVINACARGGLDWEGLL 232
Query: 186 DLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADG 244
L EM+ + + + VT NT LSAC DE E + M D D TY +
Sbjct: 233 GLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVET 291
Query: 245 YTRADQFEKSLAMLKKSEKLIQGKVTRV-AYEYLLTRYAAIGKKDDVYRIWNMCKNLNHS 303
+ + + EK +L E G + + +Y LL YA G + +++ + +
Sbjct: 292 FGKLRRLEKVCDLL--GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCT 349
Query: 304 RNSSYISMLTALL-RLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEAC 362
N++ S+L L + D ++ E +S NT D N+L+ ++ E G ++
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 363 IARLLERDIKFD 374
++E +I+ D
Sbjct: 410 FHDMVEENIEPD 421
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 4/204 (1%)
Query: 203 NTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSE 262
N + AC D ++ EK+L++ME + D FTY T Y + ++L++ + E
Sbjct: 207 NVLVHACSKSGDPEKAEKLLSEME-EKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 263 KLIQGKVTR-VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDV 321
+ G V Y + ++ G+ + R++ K+ + + +Y +++ R+ND+
Sbjct: 266 R--SGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDI 323
Query: 322 DGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRL 381
D A R+ E ES + N ++R CE+G + +A + + + I+ D + L
Sbjct: 324 DEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTL 383
Query: 382 ASGYCRCKDMDKAVETLKKAILAG 405
+ YC+ +DM AV+ KK I +G
Sbjct: 384 INAYCKIEDMVSAVKVKKKMIESG 407
>AT3G11350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3558495-3560078 FORWARD
LENGTH=359
Length = 359
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 111/250 (44%), Gaps = 44/250 (17%)
Query: 58 HGDLQFFIKQLRSFR-RFKHALQISEWMSDERNHYLHSGDIAIRLDLISKVRGLEEAEKY 116
HG ++ + Q R AL++S+WM + + L D + R LI V GLEEAEKY
Sbjct: 39 HGRIEAALDQKAEITARLHQALEVSDWMIEHKICCLVPEDFSARFQLIENVLGLEEAEKY 98
Query: 117 FWSIPETSRDFKVYGAFLNCHAQHSS---VEKAEAIMQRIKEYPSMPAKGLALSYNVMMG 173
F SIPE R +Y A L +A+ S +++A I I+E + +
Sbjct: 99 FESIPENLRGESLYTALLRSYAKRSEKKYLDRASRI--HIQEDERISS------------ 144
Query: 174 LYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQME------ 226
G +K+ + +REMKE N+ + +T+N L +D+ ME+ LA E
Sbjct: 145 ----FGTRDKVDESLREMKESNIDLDRLTVNKALRVYAAASDVAAMERFLADWEGTVKLD 200
Query: 227 -----VDPRATVDWFTYCTAADGYTRAD----QFEKSLAMLKKSEKLIQGKVTRVAYEYL 277
R T +W C+ + R + M++K+EKL+ TR +Y
Sbjct: 201 LMISTEQRRYTNEW--QCSRLEFDVRMPIMLVSAYREKGMVEKAEKLM----TRWGLKYR 254
Query: 278 LTRYAAIGKK 287
L A IG K
Sbjct: 255 LCSKACIGDK 264
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 167/402 (41%), Gaps = 50/402 (12%)
Query: 60 DLQFFIKQLRSFRRFKHALQISEWMSDERNH--YLHSGDIAIRLDLISKVRGLEEAEKYF 117
+L F+K L ++F AL+ +W ++++ L + +AI + ++ K + A F
Sbjct: 137 ELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMF 196
Query: 118 WSIPET--SRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLY 175
+ E S D Y + ++ A +A + ++++E P ++YNV++ ++
Sbjct: 197 NGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPT---LITYNVILNVF 253
Query: 176 ARTGQ-YEKLHDLMREMKEKNLC-NHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATV 233
+ G + K+ L+ +MK + + T NT ++ C + E ++ +M+ +
Sbjct: 254 GKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKA-AGFSY 312
Query: 234 DWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQG-KVTRVAYEYLLTRYAAIGKKDDVYR 292
D TY D Y ++ + ++++ +L +E ++ G + V Y L++ YA G D+
Sbjct: 313 DKVTYNALLDVYGKSHRPKEAMKVL--NEMVLNGFSPSIVTYNSLISAYARDGMLDEAME 370
Query: 293 IWN-MCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESG----------------- 334
+ N M + +Y ++L+ R V+ A I EE +
Sbjct: 371 LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYG 430
Query: 335 ---------------NTC---KDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGS 376
N C DI N L+ ++ +NG+ + + +
Sbjct: 431 NRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE 490
Query: 377 IWDRLASGYCRCKDMDKAVETLKKAILAG-RPGWKAYPFTLA 417
++ L S Y RC ++A+ ++ + AG P Y LA
Sbjct: 491 TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLA 532
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 148/372 (39%), Gaps = 50/372 (13%)
Query: 91 YLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFK----VYGAFLNCHAQHSSVEKA 146
Y S + + LD + K + F +I E+ DF+ +YG + + S V K
Sbjct: 141 YPSSDSLTLLLDHLVKTKQFRVTINVFLNILES--DFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 147 EAIMQRIKE---YPS--------------------------MPAKGLA---LSYNVMMGL 174
+ R+K YPS M A+ L ++YN ++
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 175 YARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATV 233
Y + G EK + MK ++ + +T NT L +++ E +L +M+ D
Sbjct: 259 YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK-DLGFVP 317
Query: 234 DWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAY--EYLLTRYAAIGKKDDVY 291
D FT+ DGY+ ++ E +L + E + V AY LL GK +
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVY---ETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 292 RIWN--MCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRM 349
I M K L + Y +M+ R D+ GA +E E D N L+R
Sbjct: 375 EILGREMAKGLVPNE-VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 350 YCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGR-PG 408
+CE G +E AE + ++ + + ++ L GY R + DK + LK+ G P
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 409 WKAYPFTLAQCI 420
+Y TL C+
Sbjct: 494 VVSYG-TLINCL 504
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 167/405 (41%), Gaps = 44/405 (10%)
Query: 89 NHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEA 148
N GD + L+L++K+ EA K D ++ ++ ++ V+ A
Sbjct: 233 NGLCKRGDTDLALNLLNKM----EAAK-------IEADVVIFNTIIDSLCKYRHVDDA-- 279
Query: 149 IMQRIKEYPSMPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNT 204
+ + M KG+ ++Y+ ++ G++ L+ +M EK + N VT N
Sbjct: 280 ----LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 205 WLSACVTINDIDEMEKILAQM---EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLK-- 259
+ A V E EK+ M +DP D FTY + +G+ D+ +K+ M +
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRSIDP----DIFTYNSLVNGFCMHDRLDKAKQMFEFM 391
Query: 260 KSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNH----SRNSSYISMLTAL 315
S+ VT Y L+ + + +D ++ + ++H +Y +++ L
Sbjct: 392 VSKDCFPDVVT---YNTLIKGFCKSKRVEDGTELF---REMSHRGLVGDTVTYTTLIQGL 445
Query: 316 LRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDG 375
D D A+++ ++ S DI ++L+ C NG LEKA + + +IK D
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 376 SIWDRLASGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEI 435
I+ + G C+ +D + L G K T I L KR + A +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSL---KGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 436 LRLCGERGYF-TAATHDRLLSYVHGEIPEANALDLIDEDNRLRVV 479
L+ E G + T++ L+ + +A + +LI E R V
Sbjct: 563 LKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 607
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 144/343 (41%), Gaps = 24/343 (6%)
Query: 108 RGLEEAEKYFWSIPET--SRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLA 165
R + AE F + E+ S + Y + +++ A + +++ +P
Sbjct: 184 RNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN---V 240
Query: 166 LSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQ 224
++YN ++ Y + + + L+R M K L N ++ N ++ + E+ +L +
Sbjct: 241 VTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTE 300
Query: 225 MEVDPRA-TVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRV-AYEYLLTRYA 282
M + R ++D TY T GY + F ++L M +E L G V Y L+
Sbjct: 301 M--NRRGYSLDEVTYNTLIKGYCKEGNFHQALVM--HAEMLRHGLTPSVITYTSLIHSMC 356
Query: 283 AIGKKD------DVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNT 336
G + D R+ +C N +Y +++ + ++ A R++ E
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPN-----ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 337 CKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVE 396
+ N L+ +C G +E A A + + E+ + D + + SG+CR D+D+A+
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 397 TLKKAILAG-RPGWKAYPFTLAQCIEHLKEKRDSELASEILRL 438
++ + G +P Y + E + K +L E+LR+
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV 514
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 151/333 (45%), Gaps = 29/333 (8%)
Query: 128 KVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDL 187
+ Y ++ +Q + +A +++ + + P+ ++YN ++ + TG+ E +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPS---VVTYNALINGHCVTGKMEDAIAV 437
Query: 188 MREMKEKNLC-NHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYT 246
+ +MKEK L + V+ +T LS D+DE ++ +M V+ D TY + G+
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM-VEKGIKPDTITYSSLIQGFC 496
Query: 247 RADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWN-MCKNLNHSRN 305
+ +++ + ++ + + Y L+ Y G + ++ N M +
Sbjct: 497 EQRRTKEACDLYEEMLR-VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 306 SSYISMLTALLRLNDVDGAERIV------EEWESGNT-------CKDIRIPNL--LVRMY 350
+Y ++ L + + A+R++ E S T C +I ++ L++ +
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 351 CENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGRPGWK 410
C G++ +A+ +L ++ K DG+ ++ + G+CR D+ KA K+ + + G+
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV---KSGFL 672
Query: 411 AYPFTLAQCIEHL-KEKRDSELAS---EILRLC 439
+ T+ ++ L KE + +EL S +LR C
Sbjct: 673 LHTVTVIALVKALHKEGKVNELNSVIVHVLRSC 705
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 11/285 (3%)
Query: 129 VYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLM 188
+Y AF+ + + ++Q K++ + ++ + +M LY +G E H L
Sbjct: 89 LYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIR---IMLLYGYSGMAEHAHKLF 145
Query: 189 REMKEKNLCNHV-TLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTR 247
EM E N V + N LSA V +DE K ++ T D TY T R
Sbjct: 146 DEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCR 205
Query: 248 ADQFEKSLAMLKKSEKLIQG-KVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRN- 305
+ L++ ++ EK G + +++ LL + + RIW++ K+ N S N
Sbjct: 206 KGSMDDILSIFEELEK--NGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI 263
Query: 306 SSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIAR 365
SY S + L R A +++ ++ D+ N L+ Y + LE+ C
Sbjct: 264 RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNE 323
Query: 366 LLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAI---LAGRP 407
+ E+ + D + L C+ D+D+AVE ++AI L RP
Sbjct: 324 MKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRP 368
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 142/324 (43%), Gaps = 19/324 (5%)
Query: 129 VYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLM 188
Y L + ++AE + + + + P K Y++M+ +Y + G YEK +
Sbjct: 211 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 189 REMKEKNLCNH-VTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTR 247
M K + VT N+ +S + ++ ++ + + ++ P D +Y Y R
Sbjct: 271 SSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQP----DVVSYALLIKAYGR 326
Query: 248 ADQFEKSLAMLKKSEKLIQGKV--TRVAYEYLLTRYAAIGKKDDVYRIW-NMCKNLNHSR 304
A + E++L++ E+++ V T AY LL +A G + ++ +M ++
Sbjct: 327 ARREEEALSVF---EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383
Query: 305 NSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIA 364
SY +ML+A + +D++GAE+ + + +I L++ Y + +EK
Sbjct: 384 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 443
Query: 365 RLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGRP---GWKAYPFTLAQCIE 421
++ IK + +I + RCK+ A+ K+ G P K +LA +
Sbjct: 444 KMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 503
Query: 422 HLKEKRD-----SELASEILRLCG 440
L+E ++ +E A+ I R+ G
Sbjct: 504 ELEEAKELTGIRNETATIIARVYG 527
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 142/324 (43%), Gaps = 19/324 (5%)
Query: 129 VYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLM 188
Y L + ++AE + + + + P K Y++M+ +Y + G YEK +
Sbjct: 218 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 277
Query: 189 REMKEKNLCNH-VTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTR 247
M K + VT N+ +S + ++ ++ + + ++ P D +Y Y R
Sbjct: 278 SSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQP----DVVSYALLIKAYGR 333
Query: 248 ADQFEKSLAMLKKSEKLIQGKV--TRVAYEYLLTRYAAIGKKDDVYRIW-NMCKNLNHSR 304
A + E++L++ E+++ V T AY LL +A G + ++ +M ++
Sbjct: 334 ARREEEALSVF---EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 390
Query: 305 NSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIA 364
SY +ML+A + +D++GAE+ + + +I L++ Y + +EK
Sbjct: 391 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 450
Query: 365 RLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGRP---GWKAYPFTLAQCIE 421
++ IK + +I + RCK+ A+ K+ G P K +LA +
Sbjct: 451 KMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 510
Query: 422 HLKEKRD-----SELASEILRLCG 440
L+E ++ +E A+ I R+ G
Sbjct: 511 ELEEAKELTGIRNETATIIARVYG 534
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 148/376 (39%), Gaps = 63/376 (16%)
Query: 126 DFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLH 185
D YG L+ + V+ A++++Q + +P A + N+++ + G+ +
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN---AYTCNILLHSLWKMGRISEAE 451
Query: 186 DLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATV----------- 233
+L+R+M EK + VT N + ++D+ +I+ M V A +
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511
Query: 234 -----------DWFTYCTAADGYTRADQFE--KSLAMLKKSEKLIQGKVTRVAYEYLLTR 280
D TY T +G +A +F K+L EKL + VAY +
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKL---QPDSVAYNIFIHH 568
Query: 281 YAAIGKKDDVYRIW-NMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKD 339
+ GK +R+ +M K H +Y S++ L N + +++E + +
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Query: 340 IRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLK 399
I N ++ CE +E A + +++++I + + L +C+ D D A E +
Sbjct: 629 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Query: 400 KAI-LAGRP------------------------------GWKAYPFTLAQCIEHLKEKRD 428
A+ + G+ G++ F +E L +K +
Sbjct: 689 TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDE 748
Query: 429 SELASEILRLCGERGY 444
E+AS IL +RGY
Sbjct: 749 LEVASGILHKMIDRGY 764
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 137/345 (39%), Gaps = 55/345 (15%)
Query: 110 LEEAEKYFWSIPETS---RDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLAL 166
++ A + F +PE +F +G + + + +K ++ ++ + +P K +
Sbjct: 163 VDAARELFDEMPEKGCKPNEF-TFGILVRGYCKAGLTDKGLELLNAMESFGVLPNK---V 218
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTWLSACVTINDIDEMEKILAQM 225
YN ++ + R G+ + ++ +M+E+ L + VT N+ +SA + + +I + M
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278
Query: 226 EVD-----PRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTR 280
E+D PR + TY G+ + E + T
Sbjct: 279 ELDEYLGLPRP--NSITYNLMLKGFCKVGLLEDAK-----------------------TL 313
Query: 281 YAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDI 340
+ +I + DD+ + SY L L+R AE ++++ I
Sbjct: 314 FESIRENDDLASL------------QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSI 361
Query: 341 RIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKK 400
N+L+ C+ G+L A+ + + + D + L GYC +D A L++
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421
Query: 401 AILAGRPGWKAYPFTLAQCIEHL-KEKRDSELASEILRLCGERGY 444
+ R +T + L K R SE A E+LR E+GY
Sbjct: 422 MM---RNNCLPNAYTCNILLHSLWKMGRISE-AEELLRKMNEKGY 462
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 165/418 (39%), Gaps = 78/418 (18%)
Query: 43 TPLLNQWVQEGRPIN-HGDLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIRL 101
T L+N ++ GRP H I++ + ++ R + HS L
Sbjct: 323 TKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALT---RQKHFHS-----LL 374
Query: 102 DLISKVR--GLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSM 159
LISKV GL+ P+T ++ A +N ++ ++++A I +++KE
Sbjct: 375 SLISKVEKNGLK---------PDTI----LFNAIINASSESGNLDQAMKIFEKMKESGCK 421
Query: 160 PAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC--NHVTLNTWLSACVTINDIDE 217
P A ++N ++ Y + G+ E+ L+ M + N T N + A I+E
Sbjct: 422 PT---ASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEE 478
Query: 218 MEKILAQME---VDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAY 274
I+ +M+ V P D T+ T A Y R + M+ +++ KV
Sbjct: 479 AWNIVYKMQSYGVKP----DVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVR 532
Query: 275 E--YLLTRYAAIGKKDDVYRIWNMCKNLN-HSRNSSYISMLTALLRLNDVDGAERIVE-- 329
++ Y GK ++ R + K L H + S++ L +ND+DG +V+
Sbjct: 533 TCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLM 592
Query: 330 -----------------EWES----------------GNTCKDIRIPNLLVRMYCENGLL 356
W S G DI ++L + Y G
Sbjct: 593 EEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEP 652
Query: 357 EKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKK--AILAGRPGWKAY 412
EKAE + ++ + ++ + I+ ++ SG+C +M KA++ KK I+ P Y
Sbjct: 653 EKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTY 710
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 167/406 (41%), Gaps = 46/406 (11%)
Query: 89 NHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEA 148
N GDI + +L++K+ EA K D ++ ++ ++ V+ A
Sbjct: 158 NGLCKRGDIDLAFNLLNKM----EAAK-------IEADVVIFNTIIDSLCKYRHVDDA-- 204
Query: 149 IMQRIKEYPSMPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNT 204
+ + M KG+ ++Y+ ++ G++ L+ +M EK + N VT N
Sbjct: 205 ----LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 260
Query: 205 WLSACVTINDIDEMEKI---LAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKS 261
+ A V E EK+ + + +DP D FTY + +G+ D+ L K+
Sbjct: 261 LIDAFVKEGKFVEAEKLHDDMIKRSIDP----DIFTYNSLINGFCMHDR-------LDKA 309
Query: 262 EKLIQGKVTRVAYEYLLTRYAAIG---KKDDVYRIWNMCKNLNH----SRNSSYISMLTA 314
+++ + V++ + L T I K V + + ++H +Y +++
Sbjct: 310 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 369
Query: 315 LLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFD 374
L D D A+++ ++ S DI ++L+ C NG LEKA + + +IK D
Sbjct: 370 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 429
Query: 375 GSIWDRLASGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASE 434
I+ + G C+ +D + L G K T I L KR + A
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSL---KGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 435 ILRLCGERGYFT-AATHDRLLSYVHGEIPEANALDLIDEDNRLRVV 479
+L+ E G + T++ L+ + +A + +LI E R V
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFV 532
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 113/267 (42%), Gaps = 37/267 (13%)
Query: 166 LSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TLNTWLSACVTINDIDEMEKILAQ 224
+++N ++ + +R G +E +L EM + + V + NT L A +D +ILAQ
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399
Query: 225 MEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKL--------------IQGKVT 270
M V R + +Y T DG+ +A +F+++L + + L I KV
Sbjct: 400 MPVK-RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVG 458
Query: 271 R--------------------VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYI 309
R V Y LL Y GK D+V +++ K + N +Y
Sbjct: 459 RSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYS 518
Query: 310 SMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLER 369
+++ + A I E++S D+ + + L+ C+NGL+ A + I + +
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 370 DIKFDGSIWDRLASGYCRCKDMDKAVE 396
I + ++ + + R MD++ +
Sbjct: 579 GISPNVVTYNSIIDAFGRSATMDRSAD 605
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 121/289 (41%), Gaps = 17/289 (5%)
Query: 125 RDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKL 184
++ VY + A E E I++ +YP+M +G ++ LY R G +E
Sbjct: 69 KNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVAR---IINLYGRVGMFENA 125
Query: 185 HDLMREMKEKNLCNHVTL--NTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAA 242
+ EM E+N C L N L+ACV D +E I ++ D +Y T
Sbjct: 126 QKVFDEMPERN-CKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLI 184
Query: 243 DGYTRADQFEKSLAMLKKSEKLIQG-KVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLN 301
G F +++A++ + E +G K + + LL GK ++ +IW N
Sbjct: 185 KGLCGKGSFTEAVALIDEIEN--KGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 302 HSRN-SSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAE 360
R+ SY + L L N + + ++ + D+ +++ + G L++A
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAI 302
Query: 361 ACIARLLE---RDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGR 406
+ + R +KF +++ L C+ D++ A E L K I A R
Sbjct: 303 TWYKEIEKNGCRPLKF---VFNSLLPAICKAGDLESAYE-LCKEIFAKR 347
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 138/344 (40%), Gaps = 52/344 (15%)
Query: 69 RSFRRFKHALQISEWMSD---ERNHYLH---SGDIAIRLDLISKVRGLEEAEKYFWSIPE 122
R+ RR A + EW+ + E+N Y + G +A ++L +V E A+K F +PE
Sbjct: 76 RTVRRLAAAKKF-EWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPE 134
Query: 123 TS--RDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPS-MPAKGLALSYNVMMGLYARTG 179
+ R + A LN + E I KE P + + SYN ++ G
Sbjct: 135 RNCKRTALSFNALLNACVNSKKFDLVEGIF---KELPGKLSIEPDVASYNTLIKGLCGKG 191
Query: 180 QYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTY 238
+ + L+ E++ K L +H+T N L T +E E+I A+M V+ D +Y
Sbjct: 192 SFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARM-VEKNVKRDIRSY 250
Query: 239 CTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCK 298
G LAM KSE+++ L + K DV+
Sbjct: 251 NARLLG----------LAMENKSEEMVS----------LFDKLKGNELKPDVF------- 283
Query: 299 NLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIR-IPNLLVRMYCENGLLE 357
++ +M+ + +D A +E E N C+ ++ + N L+ C+ G LE
Sbjct: 284 --------TFTAMIKGFVSEGKLDEAITWYKEIEK-NGCRPLKFVFNSLLPAICKAGDLE 334
Query: 358 KAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKA 401
A + + + D ++ + + D+A E ++ A
Sbjct: 335 SAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELA 378
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 124/294 (42%), Gaps = 16/294 (5%)
Query: 123 TSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYE 182
T D + A +N ++ ++E A + ++KE P +YN ++ Y G+ E
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTS---TYNTLIKGYGIAGKPE 167
Query: 183 K---LHDLMREMKEKNLCNHV-TLNTWLSACVTINDIDEMEKILAQME---VDP-RATVD 234
+ L DLM E ++ ++ T N + A ++E +++ +ME V P T +
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 235 WFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIW 294
C G T + E M+ K + G+ + ++ Y G+ D R
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI----VVGGYCREGRVRDGLRFV 283
Query: 295 NMCKNLNHSRN-SSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCEN 353
K + N + S++ + + D DG + ++ + N D+ + ++ +
Sbjct: 284 RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSA 343
Query: 354 GLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGRP 407
G +EKA +++ +K D + LA GY R K+ KA E L+ I+ RP
Sbjct: 344 GYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRP 397
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 14/289 (4%)
Query: 122 ETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQY 181
E +D Y + ++ +V+KAE++ + E A ++YN M+G + R G+
Sbjct: 285 EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE---RKASIDVVTYNTMLGGFCRCGKI 341
Query: 182 EKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTA 241
++ +L R M+ KN N V+ N + + IDE I M A D TY
Sbjct: 342 KESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAA-DKTTYGIF 400
Query: 242 ADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLN 301
G K+L ++++ E G + AY ++ + KK + N+ K ++
Sbjct: 401 IHGLCVNGYVNKALGVMQEVES-SGGHLDVYAYASIID---CLCKKKRLEEASNLVKEMS 456
Query: 302 -HSRN-SSYI--SMLTALLRLNDVDGAERIVEEWESGNTCKDIRIP-NLLVRMYCENGLL 356
H +S++ +++ L+R + + A + E N C+ + N+L+ C+ G
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREM-GKNGCRPTVVSYNILICGLCKAGKF 515
Query: 357 EKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAG 405
+A A + +LE K D + L G CR + +D A+E + + +G
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 144/343 (41%), Gaps = 17/343 (4%)
Query: 122 ETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKE-YPSMPAKGLALSYNVMMGLYARTGQ 180
E D V + + + ++S ++A + +R++E + PA SYN ++ + Q
Sbjct: 73 ECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPA---IRSYNTLLNAFVEAKQ 129
Query: 181 YEKLHDLMREMKEKNLC-NHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYC 239
+ K+ L + + N T N + + ++ L M + D F+Y
Sbjct: 130 WVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKP-DVFSYS 188
Query: 240 TAADGYTRADQFEKSLAMLKK-SEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWN--M 296
T + +A + + +L + + SE+ + VT Y L+ + +W+ +
Sbjct: 189 TVINDLAKAGKLDDALELFDEMSERGVAPDVT--CYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 297 CKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLL 356
+ + ++ M++ L + VD +I E + KD+ + L+ C+ G +
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV 306
Query: 357 EKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTL 416
+KAE+ L ER D ++ + G+CRC + +++E + I+ + + +
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR--IMEHKNSVNIVSYNI 364
Query: 417 AQCIEHLKEKRDSELASEILRLCGERGYFTAATHDRLLSYVHG 459
I+ L E + A+ I RL +GY AA ++HG
Sbjct: 365 L--IKGLLENGKIDEATMIWRLMPAKGY--AADKTTYGIFIHG 403
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/410 (20%), Positives = 169/410 (41%), Gaps = 28/410 (6%)
Query: 65 IKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETS 124
++ LR + L+ +W+S++ + + L+ + + R L A + +SI S
Sbjct: 72 LQTLRLIKVPADGLRFFDWVSNKGFSH-KEQSFFLMLEFLGRARNLNVARNFLFSIERRS 130
Query: 125 RD-FKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLA---LSYNVMMGLYARTGQ 180
K+ + N + S A + +K + +M G++ L++N ++ + + G+
Sbjct: 131 NGCVKLQDRYFNSLIR--SYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGR 188
Query: 181 YEKLHDLMREMKEKN--LCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTY 238
HDL EM+ + T NT ++ + +DE +I ME+ D TY
Sbjct: 189 TGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMEL-YHCNPDVVTY 247
Query: 239 CTAADGYTRADQFEKS----LAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIW 294
T DG RA + + + MLKK+ + V V+Y L+ Y + D+ ++
Sbjct: 248 NTIIDGLCRAGKVKIAHNVLSGMLKKATD-VHPNV--VSYTTLVRGYCMKQEIDEAVLVF 304
Query: 295 NMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIP-----NLLVRM 349
+ L+ + ++ T + L++ + I + GN P N+L++
Sbjct: 305 H--DMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKA 362
Query: 350 YCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAV----ETLKKAILAG 405
+C+ G L+ A +L + D + + L C + D+A E +K +L G
Sbjct: 363 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLG 422
Query: 406 RPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERGYFTAATHDRLLS 455
+ K E+L ++ A ++ R +RG ++ L++
Sbjct: 423 KDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLIT 472
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 166/382 (43%), Gaps = 23/382 (6%)
Query: 32 ISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHY 91
+SR D P+ L+++V+ R +H L F ++L ++ L++ WM +R +
Sbjct: 75 MSRISDRE-PLVKTLDKYVKVVR-CDHCFLLF--EELGKSDKWLQCLEVFRWMQKQRWYI 130
Query: 92 LHSGDIAIRLDLISKVRGLEEAEKYFWSIPETS---RDFKVYGAFLNCHAQHSSVEKAEA 148
+G + + ++ K +G + +S + S D VY A + H + +KA+A
Sbjct: 131 PDNGVYSKLISVMGK-KGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLH--TRDKAKA 187
Query: 149 IMQRIKEYPSMPAKGL------ALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-T 201
+ ++++ Y KG+ ++YN+++ +A++G+ ++++ L +++ + V T
Sbjct: 188 L-EKVRGYLD-KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 202 LNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKS 261
N + A I EME +L +M + D T+ D Y + +FEK + KS
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSN-ECKPDIITFNVLIDSYGKKQEFEK-MEQTFKS 303
Query: 262 EKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLND 320
+ K T + ++ Y D ++ ++N+ + +Y M+
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 321 VDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDR 380
V A I EE + N ++ +YC NGL +A+ + D S +
Sbjct: 364 VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKF 423
Query: 381 LASGYCRCKDMDKAVETLKKAI 402
L Y + DM + V+ L K +
Sbjct: 424 LYKAYTKA-DMKEQVQILMKKM 444
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 129/299 (43%), Gaps = 24/299 (8%)
Query: 130 YGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLA---LSYNVMMGLYARTGQYEKLHD 186
Y ++ +H S++ A + + M KG+ ++YN+++G + G+++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNL------FNEMEMKGITTNIITYNILIGGFCNAGRWDDGAK 319
Query: 187 LMREM-KEKNLCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGY 245
L+R+M K K N VT + + + V + E E++ +M + D TY + DG+
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPDTITYTSLIDGF 378
Query: 246 TRADQFEKSLAML-----KKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIW-NMCKN 299
+ + +K+ M+ K + I+ + L+ Y + DD ++ M
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIR------TFNILINGYCKANRIDDGLELFRKMSLR 432
Query: 300 LNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKA 359
+ +Y +++ L ++ A+ + +E S +I +L+ C+NG EKA
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 360 EACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAG-RPGWKAYPFTLA 417
++ + ++ D I++ + G C +D A + L G +PG K Y +
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 551
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/270 (20%), Positives = 121/270 (44%), Gaps = 19/270 (7%)
Query: 142 SVEKAEAIM--QRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CN 198
S ++AEA++ ++ EY P A++Y ++ + ++GQ +L+R+M+E+N+ +
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPN---AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLD 262
Query: 199 HVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAML 258
V + + +D + +ME+ T + TY G+ A +++ +L
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDDGAKLL 321
Query: 259 KKSEKLIQGKVTR--VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNH----SRNSSYISML 312
+ +I+ K+ V + L+ + GK + + K + H +Y S++
Sbjct: 322 RD---MIKRKINPNVVTFSVLIDSFVKEGKLREAEELH---KEMIHRGIAPDTITYTSLI 375
Query: 313 TALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIK 372
+ N +D A ++V+ S +IR N+L+ YC+ ++ ++ R +
Sbjct: 376 DGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVV 435
Query: 373 FDGSIWDRLASGYCRCKDMDKAVETLKKAI 402
D ++ L G+C ++ A E ++ +
Sbjct: 436 ADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 115/284 (40%), Gaps = 11/284 (3%)
Query: 126 DFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLH 185
D Y +N + + ++K +++ +K P + Y ++GL R + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI---YGSIIGLLCRICKLAEAE 336
Query: 186 DLMREM-KEKNLCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADG 244
+ EM ++ L + V T + DI K +M T D TY G
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH-SRDITPDVLTYTAIISG 395
Query: 245 YTRADQFEKSLAMLKKSEKLIQG-KVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHS 303
+ + ++ + E +G + V + L+ Y G D +R+ N S
Sbjct: 396 FCQIGDMVEAGKLFH--EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 304 RNS-SYISMLTALLRLNDVDGAERIVEE-WESGNTCKDIRIPNLLVRMYCENGLLEKAEA 361
N +Y +++ L + D+D A ++ E W+ G +I N +V C++G +E+A
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 362 CIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAG 405
+ + D + L YC+ +MDKA E LK+ + G
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 147/397 (37%), Gaps = 52/397 (13%)
Query: 74 FKHALQISEWMSDERNHYLHSGDIAIRLDLISK-VRGLEEAEKYFWSIPETS-------- 124
++ L +W R+ L S I I L + SK ++ + FW P+ +
Sbjct: 101 YRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQF 160
Query: 125 ------------RDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMM 172
D +V+ F + +A + +++ Y GL LS +
Sbjct: 161 FDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNY------GLVLSVDSCN 214
Query: 173 GLYARTGQ--YEKLHDLM--REMKEKNLC-NHVTLNTWLSACVTINDIDEMEKILAQMEV 227
R + Y+ ++ RE E +C N + N + + I E +L ME+
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 228 DPRATVDWFTYCTAADGYTRADQFEKSLAMLK-------KSEKLIQGKVTRVAYEYLLTR 280
T D +Y T +GY R + +K +++ K I G + LL R
Sbjct: 275 KGY-TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG-----LLCR 328
Query: 281 YAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDI 340
+ + ++ + M + Y +++ + D+ A + E S + D+
Sbjct: 329 ICKLAEAEEAFS--EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386
Query: 341 RIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKK 400
++ +C+ G + +A + + ++ D + L +GYC+ M A
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 401 AILAG-RPGWKAYPFTLAQCIEHLKEKRDSELASEIL 436
I AG P Y I+ L ++ D + A+E+L
Sbjct: 447 MIQAGCSPNVVTY----TTLIDGLCKEGDLDSANELL 479
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 126/303 (41%), Gaps = 19/303 (6%)
Query: 101 LDLISKVRGLEEAEKYFWSIP--ETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPS 158
+D K + A K+F+ + + + D Y A ++ Q + +A K +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG------KLFHE 411
Query: 159 MPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTWLSACVTIND 214
M KGL ++++ ++ Y + G + + M + N VT T + D
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 215 IDEMEKILAQM-EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVA 273
+D ++L +M ++ + + FTY + +G ++ E+++ ++ + E T V
Sbjct: 472 LDSANELLHEMWKIGLQPNI--FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT-VT 528
Query: 274 YEYLLTRYAAIGKKDDVYRIWN--MCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEW 331
Y L+ Y G+ D I + K L + + + M L DG E+++
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG-EKLLNWM 587
Query: 332 ESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDM 391
+ + N LV+ YC L+ A A + R + DG ++ L G+C+ ++M
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 392 DKA 394
+A
Sbjct: 648 KEA 650
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 115/284 (40%), Gaps = 11/284 (3%)
Query: 126 DFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLH 185
D Y +N + + ++K +++ +K P + Y ++GL R + +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI---YGSIIGLLCRICKLAEAE 336
Query: 186 DLMREM-KEKNLCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADG 244
+ EM ++ L + V T + DI K +M T D TY G
Sbjct: 337 EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMH-SRDITPDVLTYTAIISG 395
Query: 245 YTRADQFEKSLAMLKKSEKLIQG-KVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHS 303
+ + ++ + E +G + V + L+ Y G D +R+ N S
Sbjct: 396 FCQIGDMVEAGKLFH--EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453
Query: 304 RNS-SYISMLTALLRLNDVDGAERIVEE-WESGNTCKDIRIPNLLVRMYCENGLLEKAEA 361
N +Y +++ L + D+D A ++ E W+ G +I N +V C++G +E+A
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 362 CIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAG 405
+ + D + L YC+ +MDKA E LK+ + G
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/397 (19%), Positives = 147/397 (37%), Gaps = 52/397 (13%)
Query: 74 FKHALQISEWMSDERNHYLHSGDIAIRLDLISK-VRGLEEAEKYFWSIPETS-------- 124
++ L +W R+ L S I I L + SK ++ + FW P+ +
Sbjct: 101 YRLVLDFFDWARSRRDSNLESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQF 160
Query: 125 ------------RDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMM 172
D +V+ F + +A + +++ Y GL LS +
Sbjct: 161 FDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNY------GLVLSVDSCN 214
Query: 173 GLYARTGQ--YEKLHDLM--REMKEKNLC-NHVTLNTWLSACVTINDIDEMEKILAQMEV 227
R + Y+ ++ RE E +C N + N + + I E +L ME+
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 228 DPRATVDWFTYCTAADGYTRADQFEKSLAMLK-------KSEKLIQGKVTRVAYEYLLTR 280
T D +Y T +GY R + +K +++ K I G + LL R
Sbjct: 275 KGY-TPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIG-----LLCR 328
Query: 281 YAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDI 340
+ + ++ + M + Y +++ + D+ A + E S + D+
Sbjct: 329 ICKLAEAEEAFS--EMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDV 386
Query: 341 RIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKK 400
++ +C+ G + +A + + ++ D + L +GYC+ M A
Sbjct: 387 LTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 401 AILAG-RPGWKAYPFTLAQCIEHLKEKRDSELASEIL 436
I AG P Y I+ L ++ D + A+E+L
Sbjct: 447 MIQAGCSPNVVTY----TTLIDGLCKEGDLDSANELL 479
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 126/303 (41%), Gaps = 19/303 (6%)
Query: 101 LDLISKVRGLEEAEKYFWSIP--ETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPS 158
+D K + A K+F+ + + + D Y A ++ Q + +A K +
Sbjct: 358 IDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG------KLFHE 411
Query: 159 MPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTWLSACVTIND 214
M KGL ++++ ++ Y + G + + M + N VT T + D
Sbjct: 412 MFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGD 471
Query: 215 IDEMEKILAQM-EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVA 273
+D ++L +M ++ + + FTY + +G ++ E+++ ++ + E T V
Sbjct: 472 LDSANELLHEMWKIGLQPNI--FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT-VT 528
Query: 274 YEYLLTRYAAIGKKDDVYRIWN--MCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEW 331
Y L+ Y G+ D I + K L + + + M L DG E+++
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDG-EKLLNWM 587
Query: 332 ESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDM 391
+ + N LV+ YC L+ A A + R + DG ++ L G+C+ ++M
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 392 DKA 394
+A
Sbjct: 648 KEA 650
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 166/382 (43%), Gaps = 23/382 (6%)
Query: 32 ISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMSDERNHY 91
+SR D P+ L+++V+ R +H L F ++L ++ L++ WM +R +
Sbjct: 75 MSRISDRE-PLVKTLDKYVKVVR-CDHCFLLF--EELGKSDKWLQCLEVFRWMQKQRWYI 130
Query: 92 LHSGDIAIRLDLISKVRGLEEAEKYFWSIPETS---RDFKVYGAFLNCHAQHSSVEKAEA 148
+G + + ++ K +G + +S + S D VY A + H + +KA+A
Sbjct: 131 PDNGVYSKLISVMGK-KGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLH--TRDKAKA 187
Query: 149 IMQRIKEYPSMPAKGL------ALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-T 201
+ ++++ Y KG+ ++YN+++ +A++G+ ++++ L +++ + V T
Sbjct: 188 L-EKVRGYLD-KMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 202 LNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKS 261
N + A I EME +L +M + D T+ D Y + +FEK + KS
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSN-ECKPDIITFNVLIDSYGKKQEFEK-MEQTFKS 303
Query: 262 EKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLND 320
+ K T + ++ Y D ++ ++N+ + +Y M+
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 321 VDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDR 380
V A I EE + N ++ +YC NGL +A+ + D S +
Sbjct: 364 VSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKF 423
Query: 381 LASGYCRCKDMDKAVETLKKAI 402
L Y + DM + V+ L K +
Sbjct: 424 LYKAYTKA-DMKEQVQILMKKM 444
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 16/247 (6%)
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWL----SACVTINDIDEMEKIL 222
+Y ++ +AR G EK ++ +++E L V + L S E+ ++
Sbjct: 301 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 360
Query: 223 AQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYA 282
M +P D +Y D Y RA + A+ ++ ++L + ++ LL+ Y+
Sbjct: 361 QHMGCEP----DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK-SHMLLLSAYS 415
Query: 283 AIGKKDDVYRIWNMCKNL--NHSRNSSYI--SMLTALLRLNDVDGAERIVEEWESGNTCK 338
K DV + + K + N +++ SML RL E+I+ E E+G
Sbjct: 416 ---KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 472
Query: 339 DIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETL 398
DI N+L+ +Y + G LE+ E L E++ + D W Y R K K +E
Sbjct: 473 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 532
Query: 399 KKAILAG 405
++ I +G
Sbjct: 533 EEMIDSG 539
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 111/262 (42%), Gaps = 20/262 (7%)
Query: 222 LAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRY 281
L +++DP+ +++ + + Y + SL L LI V ++ L
Sbjct: 96 LFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTL-----LINNGYVGVVFKIRLLMI 150
Query: 282 AAIGKKDDVYRIWNMCKNLNHSRN---------SSYISMLTALLRLNDVDGAERIVEEWE 332
+ D + ++C+ +N Y ++L +L R VD +++ E
Sbjct: 151 KSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML 210
Query: 333 SGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMD 392
C +I N +V YC+ G +E+A +++++E + D + L GYC+ KD+D
Sbjct: 211 EDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLD 270
Query: 393 KAVETLKKAILAG-RPGWKAYPFTL-AQCIEHLKEKRDSELASEILRLCGERGYFTAATH 450
A + + L G R AY + C+ +R E +++ + + T T+
Sbjct: 271 SAFKVFNEMPLKGCRRNEVAYTHLIHGLCV----ARRIDEAMDLFVKMKDDECFPTVRTY 326
Query: 451 DRLLSYVHGEIPEANALDLIDE 472
L+ + G ++ AL+L+ E
Sbjct: 327 TVLIKSLCGSERKSEALNLVKE 348
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 114/240 (47%), Gaps = 16/240 (6%)
Query: 168 YNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TLNTWLSACVTINDIDEMEKILAQME 226
YN ++ AR G +++ + EM E +C ++ T N ++ + +++E + ++++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI- 244
Query: 227 VDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQG-KVTRVAYEYLLTRYAAIG 285
V+ D+FTY + GY + + + + +E ++G + VAY +L+
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF--NEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 286 KKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAER------IVEEWESGNTCKD 339
+ D+ ++ K+ + + ++ T + + + G+ER +V+E E +
Sbjct: 303 RIDEAMDLFVKMKD-----DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPN 357
Query: 340 IRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLK 399
I +L+ C EKA + ++LE+ + + ++ L +GYC+ ++ AV+ ++
Sbjct: 358 IHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVE 417
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 133/335 (39%), Gaps = 22/335 (6%)
Query: 141 SSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC--- 197
S+V KA ++ ++ E +P ++YN ++ R+G ++ + L+ M ++ L
Sbjct: 441 SNVHKAMGVLNKMLERKVLPD---VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQ 497
Query: 198 -NHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLA 256
+ ++ L + + ++ L Q V+P + Y DGY +A + +++
Sbjct: 498 WTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM----YTALIDGYCKAGKVDEAHL 553
Query: 257 MLKK--SEKLIQGKVTRVAYEYLLTRYAAIGK-KDDVYRIWNMCKNLNHSRNSSYISMLT 313
ML+K S+ + +T + L+ A GK K+ M K S+ ++
Sbjct: 554 MLEKMLSKNCLPNSLT---FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIH 610
Query: 314 ALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKF 373
LL+ D D A ++ S T D ++ YC G L AE +A++ E +
Sbjct: 611 RLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSP 670
Query: 374 DGSIWDRLASGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELAS 433
D + L GY + A + LK+ G + T I+HL E + +
Sbjct: 671 DLFTYSSLIKGYGDLGQTNFAFDVLKR---MRDTGCEPSQHTFLSLIKHLLEMKYGKQKG 727
Query: 434 EILRLCGERGYFTAATHDRLLSYV--HGEIPEANA 466
LC T LL + H P A +
Sbjct: 728 SEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 113/250 (45%), Gaps = 10/250 (4%)
Query: 141 SSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NH 199
S K+EA + +KE K +Y V++ ++EK +L+ +M EK L N
Sbjct: 335 GSERKSEA-LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393
Query: 200 VTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLK 259
+T N ++ I++ ++ ME + + + TY GY +++ K++ +L
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELME-SRKLSPNTRTYNELIKGYCKSN-VHKAMGVLN 451
Query: 260 KSEKLIQGKVTR--VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALL 316
K+++ KV V Y L+ G D YR+ ++ + + +Y SM+ +L
Sbjct: 452 ---KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 317 RLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGS 376
+ V+ A + + E ++ + L+ YC+ G +++A + ++L ++ +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 377 IWDRLASGYC 386
++ L G C
Sbjct: 569 TFNALIHGLC 578
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 107/247 (43%), Gaps = 16/247 (6%)
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWL----SACVTINDIDEMEKIL 222
+Y ++ +AR G EK ++ +++E L V + L S E+ ++
Sbjct: 323 TYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLM 382
Query: 223 AQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYA 282
M +P D +Y D Y RA + A+ ++ ++L + ++ LL+ Y+
Sbjct: 383 QHMGCEP----DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMK-SHMLLLSAYS 437
Query: 283 AIGKKDDVYRIWNMCKNL--NHSRNSSYI--SMLTALLRLNDVDGAERIVEEWESGNTCK 338
K DV + + K + N +++ SML RL E+I+ E E+G
Sbjct: 438 ---KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTA 494
Query: 339 DIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETL 398
DI N+L+ +Y + G LE+ E L E++ + D W Y R K K +E
Sbjct: 495 DISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVF 554
Query: 399 KKAILAG 405
++ I +G
Sbjct: 555 EEMIDSG 561
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 81/180 (45%), Gaps = 5/180 (2%)
Query: 222 LAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRY 281
+ EV P D FT + Y R+ +K++ K++E + ++ V Y L+ Y
Sbjct: 216 MISFEVSP----DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGY 271
Query: 282 AAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLNDVDGAERIVEEWESGNTCKDI 340
A IG + + R+ + SRN +Y S++ + ++ AE + E + D
Sbjct: 272 AMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQ 331
Query: 341 RIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKK 400
+ +L+ YC G + A ++E ++ + +I + L +GYC+ + +A + +
Sbjct: 332 HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSR 391
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/300 (18%), Positives = 129/300 (43%), Gaps = 15/300 (5%)
Query: 110 LEEAEKYF-----WSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGL 164
L EAE+ F WS+ D Y ++ + + V++A + ++ + +P
Sbjct: 382 LVEAEQIFSRMNDWSLKP---DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT--- 435
Query: 165 ALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILA 223
++YN+++ Y+R G + + L + M ++ + + ++ +T L A + D +E K+
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 224 QMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAA 283
+ T D T G + ++ ++ +L + + + K Y+ L Y
Sbjct: 496 NVLARGLLT-DTITLNVMISGLCKMEKVNEAKEILD-NVNIFRCKPAVQTYQALSHGYYK 553
Query: 284 IGKKDDVYRIWN-MCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRI 342
+G + + + M + Y ++++ + ++ +V E + +
Sbjct: 554 VGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVAT 613
Query: 343 PNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAI 402
L+ +C G+++KA A ++E+ I + +I ++A+ R +D+A L+K +
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 120/261 (45%), Gaps = 12/261 (4%)
Query: 144 EKAEAIMQRIKEYPSMPAKGLA---LSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNH 199
EK EA+ +++KE M G + ++Y+ ++ Y + G ++MREM +K + N
Sbjct: 394 EKREAVTRKVKELVDM--HGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 200 VTLNTWLSACVTINDIDEMEKILAQMEVDPRA-TVDWFTYCTAADGYTRADQFEKSLAML 258
+TLNT L A +DE +L R VD TY T G+ R ++ EK+L M
Sbjct: 452 ITLNTILDALCKERKLDEAHNLLNS--AHKRGFIVDEVTYGTLIMGFFREEKVEKALEMW 509
Query: 259 KKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWN-MCKNLNHSRNSSYISMLTALLR 317
+ +K ++ T + L+ GK + ++ + ++ +S++ S++ +
Sbjct: 510 DEMKK-VKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCK 568
Query: 318 LNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSI 377
V+ A E + D N+L+ C+ G+ EKA L+E + D
Sbjct: 569 EGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVT 627
Query: 378 WDRLASGYCRCKDMDKAVETL 398
++ + S +C+ K + +A + L
Sbjct: 628 YNTMISAFCKDKKLKEAYDLL 648
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQME 226
+YN MM + A+T Q+E + ++ EM K L +T+ T+ A E +K + E
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGL---LTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 227 V--DPRATVDWFTYCTAADGYTRADQFEKSLAMLKK-SEKLIQGKVTRVAYEYLLTRYAA 283
+ + + T D RA +++ + K E+ +T Y LL +
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMT---YTVLLNGWCR 310
Query: 284 IGKKDDVYRIWNMCKNLNHSRNSSYIS---MLTALLRLNDVDGAERIVEEWESGNTCKDI 340
+ + RIWN ++H ++ ML LLR A ++ +S C ++
Sbjct: 311 VRNLIEAARIWN--DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 368
Query: 341 RIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKK 400
R +++R +C+ +E A +++ ++ D +++ L +G+ K +D E LK+
Sbjct: 369 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 428
Query: 401 AILAGRP 407
G P
Sbjct: 429 MQEKGHP 435
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 14/247 (5%)
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQME 226
+YN MM + A+T Q+E + ++ EM K L +T+ T+ A E +K + E
Sbjct: 196 TYNSMMSILAKTRQFETMVSVLEEMGTKGL---LTMETFTIAMKAFAAAKERKKAVGIFE 252
Query: 227 V--DPRATVDWFTYCTAADGYTRADQFEKSLAMLKK-SEKLIQGKVTRVAYEYLLTRYAA 283
+ + + T D RA +++ + K E+ +T Y LL +
Sbjct: 253 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMT---YTVLLNGWCR 309
Query: 284 IGKKDDVYRIWNMCKNLNHSRNSSYIS---MLTALLRLNDVDGAERIVEEWESGNTCKDI 340
+ + RIWN ++H ++ ML LLR A ++ +S C ++
Sbjct: 310 VRNLIEAARIWN--DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNV 367
Query: 341 RIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKK 400
R +++R +C+ +E A +++ ++ D +++ L +G+ K +D E LK+
Sbjct: 368 RSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKE 427
Query: 401 AILAGRP 407
G P
Sbjct: 428 MQEKGHP 434
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/359 (17%), Positives = 149/359 (41%), Gaps = 10/359 (2%)
Query: 88 RNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPE--TSRDFKVYGAFLNCHAQHSSVEK 145
R + H + + K+ ++ AE S+P D Y + ++ H ++ +
Sbjct: 50 RGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRS 109
Query: 146 AEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTW 205
A +++ ++ K +S+N + +++ +++ M M + N VT +TW
Sbjct: 110 ASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTW 169
Query: 206 LSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLI 265
+ ++ K M+ D + + T+ DGY +A E ++++ K+ + +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSP-NVVTFTCLIDGYCKAGDLEVAVSLYKEMRR-V 227
Query: 266 QGKVTRVAYEYLLTRYAAIGKKDDVYRIWN-MCKNLNHSRNSSYISMLTALLRLNDVDGA 324
+ + V Y L+ + G+ +++ M ++ + Y +++ + D D A
Sbjct: 228 RMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 325 ERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASG 384
+ + + + DI +++ C NG L++A + + + D+ D I+ + +
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 385 YCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERG 443
Y + M AV K I G++ L+ I+ + ++ +L I+ C E+
Sbjct: 348 YFKSGRMKAAVNMYHKLI---ERGFEPDVVALSTMIDGI--AKNGQLHEAIVYFCIEKA 401
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 107/244 (43%), Gaps = 11/244 (4%)
Query: 156 YPSMPAKGLA---LSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TLNTWLSACVT 211
+ M KG+A +YN M+ + G++ L+R+M E+ + V T N +SA V
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 212 INDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTR 271
+ E EK+ +M + D TY + G+ + ++F+ + M +
Sbjct: 379 EGKLFEAEKLCDEM-LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-----LMASPDV 432
Query: 272 VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSS-YISMLTALLRLNDVDGAERIVEE 330
V + ++ Y + D+ ++ N++ Y +++ +++++ A+ + +E
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 331 WESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKD 390
S C D N+L+ +CEN LE+A + I D ++ + G C+
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 391 MDKA 394
+D+A
Sbjct: 553 VDEA 556
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 10/245 (4%)
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQME 226
+YN MM + A+T Q+E + ++ EM K L +T+ T+ A E +K + E
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGL---LTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 227 V--DPRATVDWFTYCTAADGYTRADQFEKSLAMLKK-SEKLIQGKVTRVAYEYLLTRYAA 283
+ + + T D RA +++ + K E+ +T Y LL +
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMT---YTVLLNGWCR 310
Query: 284 IGKKDDVYRIWN-MCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRI 342
+ + RIWN M ++ ML LLR A ++ +S C ++R
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 343 PNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAI 402
+++R +C+ +E A +++ ++ D +++ L +G+ K +D E LK+
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 403 LAGRP 407
G P
Sbjct: 431 EKGHP 435
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 107/244 (43%), Gaps = 11/244 (4%)
Query: 156 YPSMPAKGLA---LSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TLNTWLSACVT 211
+ M KG+A +YN M+ + G++ L+R+M E+ + V T N +SA V
Sbjct: 319 FSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVK 378
Query: 212 INDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTR 271
+ E EK+ +M + D TY + G+ + ++F+ + M +
Sbjct: 379 EGKLFEAEKLCDEM-LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFD-----LMASPDV 432
Query: 272 VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSS-YISMLTALLRLNDVDGAERIVEE 330
V + ++ Y + D+ ++ N++ Y +++ +++++ A+ + +E
Sbjct: 433 VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQE 492
Query: 331 WESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKD 390
S C D N+L+ +CEN LE+A + I D ++ + G C+
Sbjct: 493 MISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSK 552
Query: 391 MDKA 394
+D+A
Sbjct: 553 VDEA 556
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 150/354 (42%), Gaps = 38/354 (10%)
Query: 89 NHYLHSGDIAIRLDLISKV-RGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAE 147
N GDI + L L+ K+ +G EA D +Y ++ + +V A
Sbjct: 228 NGLCKRGDIDLALSLLKKMEKGKIEA------------DVVIYTTIIDALCNYKNVNDA- 274
Query: 148 AIMQRIKEYPSMPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLN 203
+ + M KG+ ++YN ++ G++ L+ +M E+ + N VT +
Sbjct: 275 -----LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFS 329
Query: 204 TWLSACVTINDIDEMEKILAQM---EVDPRATVDWFTYCTAADGYTRADQFEKSLAM--L 258
+ A V + E EK+ +M +DP D FTY + +G+ D+ +++ M L
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDP----DIFTYSSLINGFCMHDRLDEAKHMFEL 385
Query: 259 KKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLR 317
S+ VT Y L+ + + ++ ++ N+ +Y +++ L +
Sbjct: 386 MISKDCFPNVVT---YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 442
Query: 318 LNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSI 377
D D A++I ++ S DI ++L+ C+ G LEKA L + ++ D
Sbjct: 443 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT 502
Query: 378 WDRLASGYCRCKDMDKAVETLKKAILAG-RPGWKAYPFTLAQ-CIEHLKEKRDS 429
++ + G C+ ++ + L G +P Y ++ C + LKE+ D+
Sbjct: 503 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 114/277 (41%), Gaps = 15/277 (5%)
Query: 124 SRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYA---RTGQ 180
S D Y +NC + S + A A++ ++ + P ++ + ++ Y R +
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPD---IVTLSSLLNGYCHGKRISE 168
Query: 181 YEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCT 240
L D M M+ + N VT NT + N E ++ +M V D FTY T
Sbjct: 169 AVALVDQMFVMEYQP--NTVTFNTLIHGLFLHNKASEAVALIDRM-VARGCQPDLFTYGT 225
Query: 241 AADGYTRADQFEKSLAMLKKSEKLIQGKVTR--VAYEYLLTRYAAIGKKDDVYRIWNMCK 298
+G + + +L++LKK EK GK+ V Y ++ +D ++
Sbjct: 226 VVNGLCKRGDIDLALSLLKKMEK---GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMD 282
Query: 299 NLNHSRN-SSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLE 357
N N +Y S++ L A R++ + ++ + L+ + + G L
Sbjct: 283 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 342
Query: 358 KAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKA 394
+AE +++R I D + L +G+C +D+A
Sbjct: 343 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 128/303 (42%), Gaps = 22/303 (7%)
Query: 89 NHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEA 148
N SGD ++ LDL+ R +EE D Y ++ + ++ A +
Sbjct: 201 NGICRSGDTSLALDLL---RKMEERN--------VKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 149 IMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTWLS 207
+ KE + K ++YN ++ + G++ L+++M + + N +T N L
Sbjct: 250 L---FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 208 ACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQG 267
V + E ++ +M + + + TY T DGY ++ ++ ML + +++
Sbjct: 307 VFVKEGKLQEANELYKEM-ITRGISPNIITYNTLMDGYCMQNRLSEANNML---DLMVRN 362
Query: 268 KVTR--VAYEYLLTRYAAIGKKDDVYRIW-NMCKNLNHSRNSSYISMLTALLRLNDVDGA 324
K + V + L+ Y + + DD +++ N+ K + +Y ++ + + A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 325 ERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASG 384
E + +E S D+ +L+ C+NG LEKA L + + ++ + G
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 385 YCR 387
C+
Sbjct: 483 MCK 485
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/315 (21%), Positives = 143/315 (45%), Gaps = 34/315 (10%)
Query: 101 LDLISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMP 160
L++ S L A++ F S+D + + +N +A+ ++ A K + MP
Sbjct: 104 LNMYSSCGDLRSAQRVFDD--SGSKDLPAWNSVVNAYAKAGLIDDAR------KLFDEMP 155
Query: 161 AKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL------CNHVTLNTWLSACVTIND 214
+ + +S++ ++ Y G+Y++ DL REM+ N T++T LSAC +
Sbjct: 156 ERNV-ISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGA 214
Query: 215 IDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAY 274
+++ + + A ++ +D D Y + E++ K+ + K AY
Sbjct: 215 LEQGKWVHAYID-KYHVEIDIVLGTALIDMYAKCGSLERA----KRVFNALGSKKDVKAY 269
Query: 275 EYLLTRYAAIGKKDDVYRIWN-MCKNLNHSRNS-SYISMLTALLRLNDVDGAER----IV 328
++ A G D+ +++++ M + N + NS +++ +L A + ++ + ++
Sbjct: 270 SAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMI 329
Query: 329 EEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARL-LERDIKFDGSIWDRLASGYCR 387
EE+ I+ +V +Y +GL+++AE+ IA + +E D+ IW L SG
Sbjct: 330 EEF---GITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVL----IWGSLLSGSRM 382
Query: 388 CKDMDKAVETLKKAI 402
D+ LK+ I
Sbjct: 383 LGDIKTCEGALKRLI 397
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 110 LEEAEKYFWSI--PETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALS 167
+++AE+ F + + D YG +N ++ +++KA +I + E P +
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN---VII 664
Query: 168 YNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQME 226
YN+++G + R+G+ EK +L+ EM K L N VT T + D+ E ++ +M+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 227 VDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEK 263
+ D F Y T DG R + E+++ + ++K
Sbjct: 725 LKGLVP-DSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 117/280 (41%), Gaps = 11/280 (3%)
Query: 130 YGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMR 189
YG + ++ A I +KE + + + Y ++ + + ++ +++
Sbjct: 420 YGTVVKGMCSSGDLDGAYNI---VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLK 476
Query: 190 EMKEKNLCNHV-TLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRA 248
EMKE+ + + N+ + +DE L +M V+ + FTY GY A
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEM-VENGLKPNAFTYGAFISGYIEA 535
Query: 249 DQFEKSLAMLKKSEK--LIQGKVTRVAYEYLLTRYAAIGKKDDVYRIW-NMCKNLNHSRN 305
+F + +K+ + ++ KV L+ Y GK + + +M
Sbjct: 536 SEFASADKYVKEMRECGVLPNKVLCTG---LINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 306 SSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIAR 365
+Y ++ L + + VD AE I E D+ +L+ + + G ++KA +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 366 LLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAG 405
++E + + I++ L G+CR +++KA E L + + G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 114/282 (40%), Gaps = 9/282 (3%)
Query: 159 MPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTIND 214
M KG+ + YN MM + R + + EM EK L N+ T + + D
Sbjct: 475 MEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKD 534
Query: 215 IDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAY 274
++ QM + Y T +G + Q K+ ML+ K + ++ +Y
Sbjct: 535 EQNAWDVINQMNAS-NFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSY 593
Query: 275 EYLLTRYAAIGKKDDVYRIW-NMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWES 333
++ + +G D + M +N ++ S++ + N +D A + E +S
Sbjct: 594 NSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653
Query: 334 GNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDK 393
D+ L+ +C+ ++ A + L E + + S+++ L SG+ MD
Sbjct: 654 MELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDA 713
Query: 394 AVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEI 435
A++ KK + G FT I+ L + + LAS++
Sbjct: 714 AIDLYKKMV---NDGISCDLFTYTTMIDGLLKDGNINLASDL 752
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 127/312 (40%), Gaps = 25/312 (8%)
Query: 97 IAIRLDLISKVRGLEEAEKYFWSIPETS--RDFKVYGAFLNCHAQHSSVEKAEAIMQRIK 154
+ I ++ + K +E+ + + E D Y ++ ++ +E+A +M
Sbjct: 238 LNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN--- 294
Query: 155 EYPSMPAKGLA---LSYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTWLSACV 210
+MP KG + +YN ++ + G+YE+ ++ EM L + T + L
Sbjct: 295 ---AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 211 TINDIDEMEKILAQM---EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLK--KSEKLI 265
D+ E EK+ + M +V P D + + +TR+ +K+L K LI
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVP----DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLI 407
Query: 266 QGKVTRVAYEYLLTRYAAIGKKDDVYRIWN-MCKNLNHSRNSSYISMLTALLRLNDVDGA 324
V Y L+ Y G + N M + +Y ++L L + + A
Sbjct: 408 PDNVI---YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 325 ERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASG 384
+++ E D +L+ +C+ G L+ A ++ E+ I+ D ++ L G
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 385 YCRCKDMDKAVE 396
+ + D+D A E
Sbjct: 525 FGKVGDIDTAKE 536
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 133/345 (38%), Gaps = 43/345 (12%)
Query: 98 AIRLDLISKVRGLEEAEKYF--WSIPETSRDFKV------YGAFLNCHAQHSSVEKAEAI 149
I L + K R ++AE++F WS E D V Y ++ + + +++A
Sbjct: 261 GIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASET 320
Query: 150 MQRIKEYPSMPA------------------------KGLAL-------SYNVMMGLYART 178
+R+ E +P K + L +YN+++ L+ +
Sbjct: 321 FKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKN 380
Query: 179 GQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFT 237
E+ +EMK+ L + V+ T L A + ++E E ++A+M+ D +D +T
Sbjct: 381 NDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMD-DDNVEIDEYT 439
Query: 238 YCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMC 297
Y A+ EKS + K+ + G ++ Y + Y G + R++ C
Sbjct: 440 QSALTRMYVEAEMLEKSWSWFKRFH--VAGNMSSEGYSANIDAYGERGYLSEAERVFICC 497
Query: 298 KNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLE 357
+ +N Y M+ A + A + E S D N LV++ +
Sbjct: 498 QEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPH 557
Query: 358 KAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAI 402
K + ++ E D + + S + + ++ A E K+ +
Sbjct: 558 KGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMV 602
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 147/356 (41%), Gaps = 38/356 (10%)
Query: 89 NHYLHSGDIAIRLDLISKV-RGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAE 147
N GDI + L L+ K+ +G EA D +Y ++ ++ ++ A
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEA------------DVVIYNTIIDGLCKYKHMDDA- 277
Query: 148 AIMQRIKEYPSMPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLN 203
+ + M KG+ +Y+ ++ G++ L+ +M E+ + N VT +
Sbjct: 278 -----LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFS 332
Query: 204 TWLSACVTINDIDEMEKILAQM---EVDPRATVDWFTYCTAADGYTRADQFEKSLAM--L 258
+ A V + E EK+ +M +DP D FTY + +G+ D+ +++ M L
Sbjct: 333 ALIDAFVKEGKLVEAEKLYDEMIKRSIDP----DIFTYSSLINGFCMHDRLDEAKHMFEL 388
Query: 259 KKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLR 317
S+ VT Y L+ + + ++ ++ N+ +Y +++ +
Sbjct: 389 MISKDCFPNVVT---YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 318 LNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSI 377
D D A+ + ++ S +I N+L+ C+NG L KA L ++ D
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 378 WDRLASGYCRCKDMDKAVETLKKAILAG-RPGWKAYPFTLAQ-CIEHLKEKRDSEL 431
++ + G C+ ++ E L G P AY ++ C + KE+ DS L
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLL 561
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 129/328 (39%), Gaps = 22/328 (6%)
Query: 124 SRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYA---RTGQ 180
S D Y F+NC + S + A A++ ++ + P ++ + ++ Y R
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPD---IVTLSSLLNGYCHSKRISD 171
Query: 181 YEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCT 240
L D M EM K + T T + N E ++ QM V D TY T
Sbjct: 172 AVALVDQMVEMGYKP--DTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGT 228
Query: 241 AADGYTRADQFEKSLAMLKKSEKLIQGKVTR--VAYEYLLTRYAAIGKKDDVYRIWNMCK 298
+G + + +L++LKK EK GK+ V Y ++ DD ++
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEK---GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 299 NLNHSRNS-SYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLE 357
N + +Y S+++ L A R++ + ++ + L+ + + G L
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 358 KAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGRPGWKAYP--FT 415
+AE +++R I D + L +G+C +D+A + I +P T
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI-----SKDCFPNVVT 400
Query: 416 LAQCIEHLKEKRDSELASEILRLCGERG 443
+ I+ + + E E+ R +RG
Sbjct: 401 YSTLIKGFCKAKRVEEGMELFREMSQRG 428
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 158/391 (40%), Gaps = 43/391 (10%)
Query: 77 ALQISEWMSDERNHYLHSG-------DIAIRLDLISKVRGLEEAEKYFWSIPETSRDFKV 129
ALQ ++ + Y+H DIA RL L V WS+ R ++
Sbjct: 73 ALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTV----------WSLIHRMRSLRI 122
Query: 130 ------YGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEK 183
+ +A +KA + + E+ + LA S+N ++ + ++ + EK
Sbjct: 123 GPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCF--QDLA-SFNTILDVLCKSKRVEK 179
Query: 184 LHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQM---EVDPRATVDWFTYCT 240
++L R ++ + + VT N L+ I + ++L +M ++P T TY T
Sbjct: 180 AYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT----TYNT 235
Query: 241 AADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWN-MCKN 299
G+ RA Q + + +K ++ V Y ++ + G+ +++ M +
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKR-DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 300 LNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKA 359
++Y +M+ L + ++V+ A + EE ++ N+L+R G +
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 360 EACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGR--PGWKAYPFTLA 417
E + R+ + + ++ + Y C +++KA+ +K + +G P Y ++
Sbjct: 355 EELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEK-MGSGDCLPNLDTYNILIS 413
Query: 418 QCI-----EHLKEKRDSELASEILRLCGERG 443
E + + A EILRL + G
Sbjct: 414 GMFVRKRSEDMVVAGNQAFAKEILRLQSKSG 444
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 124/290 (42%), Gaps = 12/290 (4%)
Query: 132 AFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREM 191
A +N + V A ++ R+ E P + ++Y ++ + ++GQ +L+R+M
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNE---VTYGPVLKVMCKSGQTALAMELLRKM 238
Query: 192 KEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQ 250
+E+ + + V + + +D + +ME+ D Y T G+ A +
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGR 297
Query: 251 FEKSLAMLKKSEKLIQGKVTR--VAYEYLLTRYAAIGKKDDVYRIWN-MCKNLNHSRNSS 307
++ +L+ +I+ K+T VA+ L+ + GK + + M + +
Sbjct: 298 WDDGAKLLRD---MIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 308 YISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLL 367
Y S++ + N +D A +++ S +IR N+L+ YC+ L++ ++
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 368 ERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAG-RPGWKAYPFTL 416
R + D ++ L G+C ++ A E ++ + RP +Y L
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILL 464
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 133/330 (40%), Gaps = 19/330 (5%)
Query: 156 YPSMPAKGLA---LSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWLSACVT- 211
+ M KG + Y ++ + G+++ L+R+M ++ + V + L C
Sbjct: 270 FNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVK 329
Query: 212 ---INDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGK 268
+ + +E+ K + Q + P D TY + DG+ + +Q +K+ ML G
Sbjct: 330 EGKLREAEELHKEMIQRGISP----DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 269 VTRVAYEYLLTRYAAIGKKDDVYRIW-NMCKNLNHSRNSSYISMLTALLRLNDVDGAERI 327
R + L+ Y DD ++ M + +Y +++ L ++ A+ +
Sbjct: 386 NIR-TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 328 VEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCR 387
+E S DI +L+ C+NG EKA ++ + ++ D I++ + G C
Sbjct: 445 FQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 504
Query: 388 CKDMDKAVETLKKAILAG-RPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERGYF- 445
+D A + L G +P K Y I L +K A + R E G+
Sbjct: 505 ASKVDDAWDLFCSLPLKGVKPDVKTYNIM----IGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 446 TAATHDRLLSYVHGEIPEANALDLIDEDNR 475
T++ L+ GE + LI+E R
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKR 590
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 123/285 (43%), Gaps = 15/285 (5%)
Query: 159 MPAKGLA---LSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTIND 214
M ++G+ +SYN +M + R + + + EK L N+ T + + C +D
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 215 IDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGK---VTR 271
+++ M V+ Y T +G + Q K+ +L +I+ K V+
Sbjct: 529 EQNALEVVNHM-TSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN---MIEEKRLCVSC 584
Query: 272 VAYEYLLTRYAAIGKKDDVYRIWN-MCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEE 330
++Y ++ + G+ D + MC N +Y S++ L + N +D A + +E
Sbjct: 585 MSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE 644
Query: 331 WESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKD 390
++ DI L+ +C+ +E A A + LLE + I++ L SG+ +
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 391 MDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEI 435
M A++ KK + + G + T I+ L + + LASE+
Sbjct: 705 MVAALDLYKKML---KDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/368 (18%), Positives = 154/368 (41%), Gaps = 15/368 (4%)
Query: 26 DTLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMS 85
+TL S G I + LLN+ + G NH I S FK AL++ +M
Sbjct: 342 NTLINGFSNEGKVLIA-SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF-YMM 399
Query: 86 DERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWSIPETSRDFK--VYGAFLNCHAQHSSV 143
+ + + LD + K + A ++ + Y ++ ++ +
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 144 EKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTL 202
++A ++ + + P ++Y+ ++ + + G+++ +++ + L N +
Sbjct: 460 DEAVVLLNEMSKDGIDPD---IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Query: 203 NTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLK--K 260
+T + C + + E +I M ++ T D FT+ +A + ++ ++
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGH-TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 261 SEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWN-MCKNLNHSRNSSYISMLTALLRLN 319
S+ ++ V+++ L+ Y G+ + +++ M K +H +Y S+L L +
Sbjct: 576 SDGILP---NTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632
Query: 320 DVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWD 379
+ AE+ ++ + D + N L+ C++G L KA + +++R I D +
Sbjct: 633 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692
Query: 380 RLASGYCR 387
L SG CR
Sbjct: 693 SLISGLCR 700
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 87/178 (48%), Gaps = 5/178 (2%)
Query: 269 VTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSR-NSSYISMLTALLRLNDVDGAERI 327
+++ Y+ + ++G+ D+ I +N + N +Y ++ L + ++ A +
Sbjct: 368 LSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGV 427
Query: 328 VEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCR 387
+++ E+ DI+ +L++ +C+N L+KA AC A +LE+ D ++ D L G+
Sbjct: 428 LDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVI 487
Query: 388 CKDMDKAVETLKKAIL-AGRPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERGY 444
+ A L + + A W++ T I+ L + + SE A ++L++ ++ Y
Sbjct: 488 HNKFEGASIFLMEMVKNANVKPWQS---TYKLLIDKLLKIKKSEEALDLLQMMKKQNY 542
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 134/331 (40%), Gaps = 44/331 (13%)
Query: 101 LDLISKVRGLEEAEKYFWSIPETS--RDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPS 158
+D + K R +++A F + D Y + ++C + A ++ + E
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 159 MPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDE 217
P +++N ++ +A+ G+ + L EM ++++ N VT N+ ++ + +DE
Sbjct: 307 NPN---VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 218 MEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYL 277
++I M V D TY T +G+ +A + + + +
Sbjct: 364 AQQIFTLM-VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRD----------------- 405
Query: 278 LTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTC 337
++R +G +Y +++ + +D D A+ + ++ S
Sbjct: 406 MSRRGLVG------------------NTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVH 447
Query: 338 KDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVET 397
+I N L+ C+NG LEKA L + ++ D ++ ++ G C+ ++ +
Sbjct: 448 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Query: 398 LKKAILAG-RPGWKAYPFTLAQ-CIEHLKEK 426
L G +P AY ++ C + LKE+
Sbjct: 508 FCSLSLKGVKPDVIAYNTMISGFCKKGLKEE 538
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 8/208 (3%)
Query: 166 LSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQ 224
L YNVM+ Y + +EK L + MK + + T N+ ++ +DE ++ILA+
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 225 MEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAI 284
M +D TY Y R ++ + + EK K V Y L+ +A
Sbjct: 576 M-LDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK-TGVKPNEVVYGSLINGFAES 633
Query: 285 GKKDDVYRIWNMCKNLNHSRNSSYI---SMLTALLRLNDVDGAERIVEEWESGNTCKDIR 341
G ++ + + M + H S++I S++ A ++ ++ A R+ ++ + D+
Sbjct: 634 GMVEEAIQYFRMME--EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 342 IPNLLVRMYCENGLLEKAEACIARLLER 369
N ++ + + G++ +AE+ L E+
Sbjct: 692 ASNSMLSLCADLGIVSEAESIFNALREK 719
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 121/276 (43%), Gaps = 8/276 (2%)
Query: 129 VYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLM 188
++ + A+ V+ A +++ +K S+ A + YNV + + + G+ +
Sbjct: 205 LFTTLIRGFAKEGRVDSALSLLDEMKS-SSLDAD--IVLYNVCIDSFGKVGKVDMAWKFF 261
Query: 189 REMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTR 247
E++ L + VT + + N +DE ++ +E + R + Y T GY
Sbjct: 262 HEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-AYNTMIMGYGS 320
Query: 248 ADQFEKSLAMLKKSEKLIQGKVTRV-AYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS 306
A +F+++ ++L++ +G + V AY +LT +GK D+ +++ K S
Sbjct: 321 AGKFDEAYSLLERQRA--KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLS 378
Query: 307 SYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARL 366
+Y ++ L R +D A + + + ++R N++V C++ L++A A +
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 367 LERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAI 402
+ D + L G + +D A + +K +
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 131/313 (41%), Gaps = 25/313 (7%)
Query: 129 VYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGL---ALSYNVMMGLYARTGQYEKLH 185
+Y ++ + +V A + + M KG+ ++YN ++ G++
Sbjct: 258 IYNTIIDALCNYKNVNDA------LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 186 DLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQM---EVDPRATVDWFTYCTA 241
L+ +M E+ + N VT + + A V + E EK+ +M +DP D FTY +
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP----DIFTYSSL 367
Query: 242 ADGYTRADQFEKSLAM--LKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKN 299
+G+ D+ +++ M L S+ VT Y L+ + + D+ ++
Sbjct: 368 INGFCMHDRLDEAKHMFELMISKDCFPNVVT---YNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 300 LNHSRNS-SYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEK 358
N+ +Y +++ + + D A+ + ++ S DI ++L+ C NG +E
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484
Query: 359 AEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAG-RPGWKAYPFTLA 417
A L ++ D ++ + G C+ ++ + L G +P Y ++
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544
Query: 418 Q-CIEHLKEKRDS 429
C + LKE+ D+
Sbjct: 545 GFCRKGLKEEADA 557
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 116/284 (40%), Gaps = 36/284 (12%)
Query: 143 VEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVT 201
+ KA A+ + + E+ MP +++N M+ + G E++ + EMK +N+ + VT
Sbjct: 219 MNKASAVYETMIEHGIMPT---VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVT 275
Query: 202 LNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKS------- 254
N ++ ++E + M A V +++ +GY + F+ +
Sbjct: 276 YNILINGFSKNGKMEEARRFHGDMRRSGFA-VTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334
Query: 255 ---------------------LAMLKKSEKLIQGKVTR--VAYEYLLTRYAAIGKKDDVY 291
+ + +L+ V+Y L+ Y +GK +
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEAS 394
Query: 292 RIWNMCKNLN-HSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMY 350
+++ + + H +Y +++ L +++GA+R+ EE + D+ LV+ +
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGF 454
Query: 351 CENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKA 394
+NG L A +L + IK DG + A G R D DKA
Sbjct: 455 VKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKA 498
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 160/362 (44%), Gaps = 50/362 (13%)
Query: 60 DLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIRLD-----LISKVRGLEE-- 112
DL +K L ++ A+ + EW+ L S A++LD + ++ G E
Sbjct: 138 DLVSLVKGLDDSGHWERAVFLFEWL------VLSSNSGALKLDHQVIEIFVRILGRESQY 191
Query: 113 --AEKYFWSIP--ETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSY 168
A K IP E D + Y L+ +++ EKA + +R+KE P ++Y
Sbjct: 192 SVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPT---LVTY 248
Query: 169 NVMMGLYARTGQ-YEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQME 226
NV++ ++ + G+ + K+ ++ EM+ K L + T +T LSAC + E ++ A+++
Sbjct: 249 NVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELK 308
Query: 227 ---VDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAA 283
+P TV TY + +A + ++L++LK+ E+ V Y L+ Y
Sbjct: 309 SCGYEP-GTV---TYNALLQVFGKAGVYTEALSVLKEMEE-NSCPADSVTYNELVAAYVR 363
Query: 284 IGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLNDVDGAERIVEEW-ESG---NTCK 338
G + + M N+ +Y +++ A + D A ++ E+G NTC
Sbjct: 364 AGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCT 423
Query: 339 DIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDG-----SIWDRLASGYCRCKDMDK 393
+ +LL + N +++ + D+K +G + W+ + + C K MDK
Sbjct: 424 YNAVLSLLGKKSRSNEMIK---------MLCDMKSNGCSPNRATWNTMLA-LCGNKGMDK 473
Query: 394 AV 395
V
Sbjct: 474 FV 475
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 146/328 (44%), Gaps = 21/328 (6%)
Query: 156 YPSMPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTWLSACVT 211
+ M KG ++YN ++G + G+++ L+R+M ++ + N VT + + + V
Sbjct: 286 FNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVK 345
Query: 212 INDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTR 271
+ E +++L +M + + TY + DG+ + ++ E+++ M+ L+ K
Sbjct: 346 EGKLREADQLLKEM-MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD----LMISKGCD 400
Query: 272 ---VAYEYLLTRYAAIGKKDDVYRIW-NMCKNLNHSRNSSYISMLTALLRLNDVDGAERI 327
+ + L+ Y + DD ++ M + +Y +++ + ++ A+++
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 328 VEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCR 387
+E S DI +L+ C+NG LEKA ++ + ++ D I+ + G C
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 388 CKDMDKAVETLKKAILAG-RPGWKAYPFTLAQCIEHLKEKRDSELASEIL-RLCGERGYF 445
+D A + L G + +AY +++ ++DS ++IL R E G+
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELC-----RKDSLSKADILFRKMTEEGHA 575
Query: 446 TAATHDRLLSYVH-GEIPEANALDLIDE 472
+L H G+ A +LI+E
Sbjct: 576 PDELTYNILIRAHLGDDDATTAAELIEE 603
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 131/315 (41%), Gaps = 12/315 (3%)
Query: 126 DFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLH 185
D Y + ++ + V++A ++ ++ P ++YN ++ + Q E+
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN---TVTYNTLISTLCKENQVEEAT 385
Query: 186 DLMREMKEKNLCNHV-TLNTWLSA-CVTINDIDEMEKILAQMEVDPRATVDWFTYCTAAD 243
+L R + K + V T N+ + C+T N ME + +M D FTY D
Sbjct: 386 ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME-LFEEMR-SKGCEPDEFTYNMLID 443
Query: 244 GYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHS 303
+ +++L MLK+ E L + + Y L+ + K + I++ + S
Sbjct: 444 SLCSKGKLDEALNMLKQME-LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 304 RNS-SYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEAC 362
RNS +Y +++ L + V+ A +++++ D N L+ +C G ++KA
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADI 562
Query: 363 IARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEH 422
+ + + D + L SG C+ ++ A + L+ + G P I+
Sbjct: 563 VQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK---GINLTPHAYNPVIQG 619
Query: 423 LKEKRDSELASEILR 437
L KR + A + R
Sbjct: 620 LFRKRKTTEAINLFR 634
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/332 (19%), Positives = 139/332 (41%), Gaps = 17/332 (5%)
Query: 145 KAEAIMQRIKEYPSMPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREM-KEKNLCNHV 200
K A++ + + M KG+ +SY++++ ++ G E+ L+ +M KE N +
Sbjct: 254 KGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLI 313
Query: 201 TLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKK 260
T + + ++E +L + VD F Y T DG R ++ +ML
Sbjct: 314 TYTAIIRGLCKMGKLEE-AFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 261 SE-KLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLN 319
E + IQ + + Y ++ G+ + + +Y ++L + +++
Sbjct: 373 MEQRGIQPSI--LTYNTVINGLCMAGRVSEADEVSKGVV----GDVITYSTLLDSYIKVQ 426
Query: 320 DVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWD 379
++D I + D+ + N+L++ + G +A+A + E D+ D + +
Sbjct: 427 NIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYA 486
Query: 380 RLASGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEILRLC 439
+ GYC+ +++A+E + R + + I+ L +K + A+E+L
Sbjct: 487 TMIKGYCKTGQIEEALEMFNEL----RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 440 GERG-YFTAATHDRLLSYVHGEIPEANALDLI 470
E+G Y T LL +H + L L+
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGGDKGILGLV 574
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 136/340 (40%), Gaps = 53/340 (15%)
Query: 107 VRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLAL 166
VR +E EK+ D Y A +N + + ++ A ++ R++ P +
Sbjct: 144 VRVMEILEKF------GQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPD---TV 194
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLCNH--VTLNTWLSACVTINDIDEMEKILAQ 224
+YN+M+G G+ + ++ ++ N C +T + A + +DE K++ +
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDN-CQPTVITYTILIEATMLEGGVDEALKLMDE 253
Query: 225 MEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAI 284
M + D FTY T G + +++ M++ E
Sbjct: 254 M-LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLE--------------------LK 292
Query: 285 GKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPN 344
G + DV SY +L ALL + E+++ + S ++ +
Sbjct: 293 GCEPDVI---------------SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 345 LLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILA 404
+L+ C +G +E+A + + E+ + D +D L + +CR +D A+E L+ I
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 405 G-RPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERG 443
G P Y LA ++ K ++ A EI GE G
Sbjct: 398 GCLPDIVNYNTVLATLCKNGK----ADQALEIFGKLGEVG 433
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 95 GDIAIRLDLI---SKVRGLEEAEKYFWSIPET--SRDFKVYGAFLNCHAQHSSVEKAEAI 149
G++ + LI V +E+A ++ + E S D K+Y A ++ Q A +
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 150 MQRIKEYPSMPAKGLAL---SYNVMMGLYARTGQYEKLHDLMREM-KEKNLCNHVTLNTW 205
++++KE G +L +YN+++GL+ EK+++++ +M KE + +T NT
Sbjct: 534 VEKLKE------GGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 206 LSACVTINDIDEMEKILAQME---VDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSE 262
+S D + +E+++ QM +DP T TY D Y + +++L + K
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVT----TYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 263 KLIQGKVTRVAYEYLLTRYAAIG 285
+ V Y L+ ++ +G
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLG 666
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 95 GDIAIRLDLI---SKVRGLEEAEKYFWSIPET--SRDFKVYGAFLNCHAQHSSVEKAEAI 149
G++ + LI V +E+A ++ + E S D K+Y A ++ Q A +
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 150 MQRIKEYPSMPAKGLAL---SYNVMMGLYARTGQYEKLHDLMREM-KEKNLCNHVTLNTW 205
++++KE G +L +YN+++GL+ EK+++++ +M KE + +T NT
Sbjct: 534 VEKLKE------GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 206 LSACVTINDIDEMEKILAQME---VDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSE 262
+S D + +E+++ QM +DP T TY D Y + +++L + K
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVT----TYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 263 KLIQGKVTRVAYEYLLTRYAAIG 285
+ V Y L+ ++ +G
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLG 666
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 152/372 (40%), Gaps = 41/372 (11%)
Query: 26 DTLFLRISRTGDPAIPVTPLLNQWVQEGRPINHGDLQFFIKQLRSFRRFKHALQISEWMS 85
+T+F + + DP + L + G N F +K + FK QI
Sbjct: 103 NTMFRGHALSSDP-VSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI----- 156
Query: 86 DERNHYLHSG---DIAIRLDLIS---KVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQ 139
H L G D+ + LIS + LE+A K F P RD Y A + +A
Sbjct: 157 --HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH--RDVVSYTALIKGYAS 212
Query: 140 HSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CN 198
+E A+ + I P K + +S+N M+ YA TG Y++ +L ++M + N+ +
Sbjct: 213 RGYIENAQKLFDEI------PVKDV-VSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 199 HVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTA-ADGYTRADQFEKSLAM 257
T+ T +SAC I+ ++ + +D A D Y++ + E + +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQV--HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 258 LKKSEKLIQGKVTRVAYEYLLTRYAAIG-KKDDVYRIWNMCKNLNHSRNSSYISMLTALL 316
E+L V +++ L+ Y + K+ + M ++ + + +S+L A
Sbjct: 324 F---ERLPYKDV--ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 317 RLNDVDGAERI---VEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKF 373
L +D I +++ G T + L+ MY + G +E A +L + +
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNAS-SLRTSLIDMYAKCGDIEAAHQVFNSILHKSL-- 435
Query: 374 DGSIWDRLASGY 385
S W+ + G+
Sbjct: 436 --SSWNAMIFGF 445
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 95/203 (46%), Gaps = 22/203 (10%)
Query: 95 GDIAIRLDLI---SKVRGLEEAEKYFWSIPET--SRDFKVYGAFLNCHAQHSSVEKAEAI 149
G++ + LI V +E+A ++ + E S D K+Y A ++ Q A +
Sbjct: 474 GNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRV 533
Query: 150 MQRIKEYPSMPAKGLAL---SYNVMMGLYARTGQYEKLHDLMREM-KEKNLCNHVTLNTW 205
++++KE G +L +YN+++GL+ EK+++++ +M KE + +T NT
Sbjct: 534 VEKLKE------GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 206 LSACVTINDIDEMEKILAQME---VDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSE 262
+S D + +E+++ QM +DP T TY D Y + +++L + K
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGLDPTVT----TYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 263 KLIQGKVTRVAYEYLLTRYAAIG 285
+ V Y L+ ++ +G
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLG 666
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 148/356 (41%), Gaps = 33/356 (9%)
Query: 60 DLQFFIKQLRSFRRFKHALQISEWMSDERNHYLHSGDIAIRLDLISKVRGLEEAEKYFWS 119
DL ++ R++ +Q+ EWM + + I+ + + +A + + S
Sbjct: 100 DLNVILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCIKF---VGAKNVSKALEIYQS 156
Query: 120 IPETSRDFKVY--GAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGL---ALSYNVMM-G 173
IP+ S VY + L+C ++ ++ IK + M GL ++YN ++ G
Sbjct: 157 IPDESTKINVYICNSILSCLVKNGKLDSC------IKLFDQMKRDGLKPDVVTYNTLLAG 210
Query: 174 LYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRAT 232
Y K +L+ E+ + + V T L+ C + +E E + QM+V+ +
Sbjct: 211 CIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSP 270
Query: 233 VDWFTYCTAADGYTRADQFEKSLAMLK--KSEKLIQGKVTRVAYEYLLTRYAAIGKKDDV 290
+ + Y + + Y+ ++K+ ++ KS L+ KV LL Y G D
Sbjct: 271 -NIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTT---LLKVYIKGGLFDRS 326
Query: 291 YRIWNMCKNLNHSRNS-SYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRM 349
+ + ++ ++ N Y ++ L + ++ A I ++ + D ++++
Sbjct: 327 RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISA 386
Query: 350 YCENGLLEKAEACIARLLERDI-----KFDGSIWDRLASGYCRCKDMDKAVETLKK 400
C + ++A+ L RD K D + + + YCR +M+ + +KK
Sbjct: 387 LCRSKRFKEAKE-----LSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKK 437
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 110/242 (45%), Gaps = 9/242 (3%)
Query: 164 LALSYNVMMGLYART-GQYEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKIL 222
L SY ++ + G+ EKL++ + +K +T N + AC NDI++ ++
Sbjct: 162 LCFSYELLYSILIHALGRSEKLYEAFL-LSQKQTLTPLTYNALIGACARNNDIEKALNLI 220
Query: 223 AQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKV---TRVAYEYLLT 279
A+M D + D+ Y TR+++ + S+ +L+ +++ + K+ ++ + ++
Sbjct: 221 AKMRQDGYQS-DFVNYSLVIQSLTRSNKID-SVMLLRLYKEIERDKLELDVQLVNDIIMG 278
Query: 280 RYAAIGKKDDVYRIWNMCKNLNHS-RNSSYISMLTALLRLNDVDGAERIVEEWESGNTCK 338
+A G ++ M + S + ++ +S+++AL AE + EE
Sbjct: 279 -FAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKP 337
Query: 339 DIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETL 398
R N L++ Y + G L+ AE+ ++ + +R + D + L Y + A L
Sbjct: 338 RTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVL 397
Query: 399 KK 400
K+
Sbjct: 398 KE 399
>AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16811051-16812106 FORWARD
LENGTH=351
Length = 351
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 232 TVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRV-AYEYLLTRYAAIGKKDD- 289
T D F + T Y+ L L++ I G +R AY+ L++R +G+ DD
Sbjct: 73 TSDTFKFLTNTASYS------SYLEDLRRVLPQIDGGFSRKNAYDILISRLCKLGRIDDA 126
Query: 290 VYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRM 349
+ I +M S+Y +L +L R ++ A R+VE S + D+ N +
Sbjct: 127 LIVIGDMSNGRLGLTPSTYHPILCSLTRKYKIEEAWRVVESMRSKSVSMDVTAYNYFLTS 186
Query: 350 YCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKK 400
+C +G LE A + ++ E D +D L G CR ++ A+ L++
Sbjct: 187 HCYDGELESASEVMRKIEEDGNSPDSRSYDALVLGACRAGKVEAAMAILRR 237
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 134/318 (42%), Gaps = 34/318 (10%)
Query: 104 ISKVRGLEEAEKYFWSIPETSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKG 163
+ KV + EA K F +PE RD + + + + + +A + R+ ++
Sbjct: 56 LCKVGKIAEARKLFDGLPE--RDVVTWTHVITGYIKLGDMREARELFDRVDSRKNV---- 109
Query: 164 LALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILA 223
+++ M+ Y R+ Q L +EM E+N+ V+ NT + ID+ ++
Sbjct: 110 --VTWTAMVSGYLRSKQLSIAEMLFQEMPERNV---VSWNTMIDGYAQSGRIDKALELFD 164
Query: 224 QMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAA 283
+M R V W + A R D+ + E++ + V V++ ++ A
Sbjct: 165 EMP--ERNIVSWNSMVKALVQRGRIDE------AMNLFERMPRRDV--VSWTAMVDGLAK 214
Query: 284 IGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIP 343
GK D+ R+++ N S+ +M+T + N +D A+++ + +D
Sbjct: 215 NGKVDEARRLFDCMPERNI---ISWNAMITGYAQNNRIDEADQLFQVMPE----RDFASW 267
Query: 344 NLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAIL 403
N ++ + N + KA R+ E+++ W + +GY K+ ++A+ K +
Sbjct: 268 NTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 404 AG--RPGWKAYPFTLAQC 419
G +P Y L+ C
Sbjct: 324 DGSVKPNVGTYVSILSAC 341
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 126/333 (37%), Gaps = 44/333 (13%)
Query: 124 SRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYA---RTGQ 180
S D Y F+NC + S + A A++ ++ + P ++ + ++ Y R
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPD---IVTLSSLLNGYCHSKRISD 171
Query: 181 YEKLHDLMREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCT 240
L D M EM K + T T + N E ++ QM V D TY T
Sbjct: 172 AVALVDQMVEMGYKP--DTFTFTTLIHGLFLHNKASEAVALVDQM-VQRGCQPDLVTYGT 228
Query: 241 AADGYTRADQFEKSLAMLKKSEKL-IQGKVT----------------------------- 270
+G + + +L +L K E I+ V
Sbjct: 229 VVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG 288
Query: 271 ----RVAYEYLLTRYAAIGKKDDVYRIW-NMCKNLNHSRNSSYISMLTALLRLNDVDGAE 325
V Y L+ G+ D R+ NM + + ++ +++ A + + AE
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 326 RIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGY 385
++ EE + D NLL+ +C + L++A+ ++ +D + ++ L +G+
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 386 CRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQ 418
C+CK ++ VE ++ G G T+ Q
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 14/180 (7%)
Query: 270 TRVAYEYLLTRYAAIGKKDDVYRI-WNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIV 328
T V++ L+ Y +G D+ +R+ M K+ +Y +++ AL + N +DGA +
Sbjct: 274 TVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLF 333
Query: 329 EEWESGNTCKDIRIPN-----LLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLAS 383
+E CK IPN L+ + NG ++ + ++L + ++ D +++ L +
Sbjct: 334 DEM-----CKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVN 388
Query: 384 GYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEILRLCGERG 443
G+C+ D+ A + I R G + T I+ D E A EI + + G
Sbjct: 389 GFCKNGDLVAARNIVDGMI---RRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 114/268 (42%), Gaps = 9/268 (3%)
Query: 123 TSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYE 182
T D Y A +N + + ++ A + + + +P + + ++ ++R G+ +
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPND---VIFTTLIHGHSRNGEID 362
Query: 183 KLHDLMREMKEKNLCNHVTL-NTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTA 241
+ + ++M K L + L NT ++ D+ I+ M + D TY T
Sbjct: 363 LMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLRPDKITYTTL 421
Query: 242 ADGYTRADQFEKSLAMLKKSEKLIQG-KVTRVAYEYLLTRYAAIGKKDDVYR-IWNMCKN 299
DG+ R E +L + K+ ++ G ++ RV + L+ G+ D R + M +
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQ--NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 300 LNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKA 359
+ +Y M+ A + D ++++E +S + N+L+ C+ G ++ A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 360 EACIARLLERDIKFDGSIWDRLASGYCR 387
+ + +L + D ++ L G+ R
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGHHR 567
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 19/286 (6%)
Query: 156 YPSMPAKGLALSYNVMMGLYARTGQYEKLHD---LMREMKEKNL-CNHVTLNTWLSACVT 211
+ M KG+ + L + YE+ D L+ +M E+ + N VT N + A V
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 212 INDIDEMEKILAQM---EVDPRATVDWFTYCTAADGYTRADQFEKSLAM--LKKSEKLIQ 266
+ E EK+ +M +DP D FTY + +G+ D+ +++ M L S+
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDP----DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 398
Query: 267 GKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLNDVDGAE 325
VT Y L+ + + D+ ++ N+ +Y +++ + D D A+
Sbjct: 399 NVVT---YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 455
Query: 326 RIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGY 385
+ ++ S +I N L+ C+NG LEKA L ++ ++ + G
Sbjct: 456 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 515
Query: 386 CRCKDMDKAVETLKKAILAG-RPGWKAYPFTLAQ-CIEHLKEKRDS 429
C+ ++ + L G +P Y ++ C + LKE+ D+
Sbjct: 516 CKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 110/266 (41%), Gaps = 25/266 (9%)
Query: 154 KEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWLSACVTIN 213
K + MP + L +S+NVM+ Y R K +L M E+++C + NT LS
Sbjct: 116 KLFDEMPERDL-VSWNVMIKGYVRNRNLGKARELFEIMPERDVC---SWNTMLSGYAQNG 171
Query: 214 DIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVA 273
+D+ + +M + V W +A Y + + E++ + K E V+
Sbjct: 172 CVDDARSVFDRMP--EKNDVSWNALLSA---YVQNSKMEEACMLFKSRENW-----ALVS 221
Query: 274 YEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWES 333
+ LL + KK + ++N S+ +++T + +D A ++ +E
Sbjct: 222 WNCLLGGFV---KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDE--- 275
Query: 334 GNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDK 393
+ +D+ +V Y +N ++E+A ++ ER + W+ + +GY + + M+
Sbjct: 276 -SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEM 330
Query: 394 AVETLKKAILAGRPGWKAYPFTLAQC 419
A E W AQC
Sbjct: 331 AKELFDVMPCRNVSTWNTMITGYAQC 356
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/296 (19%), Positives = 119/296 (40%), Gaps = 14/296 (4%)
Query: 126 DFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLH 185
D + +N V +A A++ R+ E P Y ++ + G E
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP-------YGTIINGLCKMGDTESAL 61
Query: 186 DLMREMKEKNLCNHVTL-NTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADG 244
+L+ +M+E ++ HV + N + + + +M D D TY D
Sbjct: 62 NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH-DKGIFPDVITYSGMIDS 120
Query: 245 YTRADQFEKSLAMLKKS-EKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIW-NMCKNLNH 302
+ R+ ++ + +L+ E+ I V V + L+ GK + I+ +M +
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDV--VTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 303 SRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEAC 362
+Y SM+ + + ++ A+R+++ S + D+ + L+ YC+ ++
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 363 IARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAG-RPGWKAYPFTLA 417
+ R I + + L G+C+ D+D A + L I +G P + + LA
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 112/275 (40%), Gaps = 46/275 (16%)
Query: 129 VYGAFLNCHAQHSSVEKAEAI---MQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLH 185
VY A ++ + +EKAEA+ M +I P + ++YNV++ Y ++
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL------VTYNVLLNYYYDNNMLKRAE 275
Query: 186 DLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADG 244
+M EM + + + N L ++ D+ + + E++PR D +Y T +
Sbjct: 276 GVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK-EMEPRGFCDVVSYSTLIET 334
Query: 245 YTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSR 304
+ RA K+ + ++ + +G V V
Sbjct: 335 FCRASNTRKAYRLFEEMRQ--KGMVMNVV------------------------------- 361
Query: 305 NSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIA 364
+Y S++ A LR + A++++++ D ++ C++G ++KA
Sbjct: 362 --TYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFN 419
Query: 365 RLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLK 399
++E +I D ++ L SG CR + +A++ +
Sbjct: 420 DMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFE 454
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/269 (18%), Positives = 107/269 (39%), Gaps = 39/269 (14%)
Query: 128 KVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDL 187
++Y +NC A+ +++ + + Y P +++NV++ +Y + ++K+++L
Sbjct: 665 EMYNCVINCCARALPLDELSGTFEEMIRYGFTPN---TVTFNVLLDVYGKAKLFKKVNEL 721
Query: 188 MREMKEKNLCNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTR 247
K + + ++ NT ++A D M + M+ D +V Y T D Y +
Sbjct: 722 FLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDG-FSVSLEAYNTLLDAYGK 780
Query: 248 ADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSS 307
Q EK ++LK+ +K G Y ++ Y G W
Sbjct: 781 DKQMEKFRSILKRMKKSTSGP-DHYTYNIMINIYGEQG--------W------------- 818
Query: 308 YISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLL 367
+D +++E + D+ N L++ Y G++E+A + +
Sbjct: 819 -------------IDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Query: 368 ERDIKFDGSIWDRLASGYCRCKDMDKAVE 396
R+I D + L + R + +A++
Sbjct: 866 GRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 107/280 (38%), Gaps = 41/280 (14%)
Query: 156 YPSMPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVT 211
+ M KG+ +YN ++ G++ L+ +M EKN+ + V N + A V
Sbjct: 273 FNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK 332
Query: 212 INDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTR 271
+ E EK+ +M D Y T G+ + + E+ + + ++
Sbjct: 333 EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE----------- 381
Query: 272 VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEW 331
+++ +G +Y +++ + D D A+ + ++
Sbjct: 382 ------MSQRGLVG------------------NTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 332 ESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDM 391
S DI N+L+ C NG +E A + +RD+K D + + C+ +
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 392 DKAVETLKKAILAG-RPGWKAYPFTLAQ-CIEHLKEKRDS 429
+ + L G +P Y ++ C + LKE+ D+
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 124/302 (41%), Gaps = 23/302 (7%)
Query: 147 EAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TLNTW 205
E I++ K+Y M +G A ++ LY + G +E + EM ++ V + N
Sbjct: 94 EEILEEQKKYRDMSKEGFAAR---IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNAL 150
Query: 206 LSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLI 265
LSA D +E++ ++ D +Y T D +++A+L + E
Sbjct: 151 LSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIEN-- 208
Query: 266 QG-KVTRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRN-SSYISMLTALLRLNDVDG 323
+G K V + LL G+ + IW N + + +Y + L L N+
Sbjct: 209 KGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLA--NEAKS 266
Query: 324 AE--RIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRL 381
E + E ++ D+ N ++R G +++AEA +++ + D + + L
Sbjct: 267 KELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
Query: 382 ASGYCRCKDMDKAV----ETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRDSELASEILR 437
C+ D + A+ ET K L G+ TL Q ++ L + E A EI++
Sbjct: 327 LPAMCKAGDFESAIELFKETFSKRYLVGQT-------TLQQLVDELVKGSKREEAEEIVK 379
Query: 438 LC 439
+
Sbjct: 380 IA 381
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 127/319 (39%), Gaps = 41/319 (12%)
Query: 123 TSRDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYE 182
T D + A +N ++ ++E A + ++KE P +YN ++ Y G+ E
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTS---TYNTLIKGYGIAGKPE 167
Query: 183 K---LHDLMREMKEKNLCNHV-TLNTWLSACVTINDIDEMEKILAQME---VDP-RATVD 234
+ L DLM E ++ ++ T N + A ++E +++ +ME V P T +
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 235 WFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAAIGKKDDVYRIW 294
C G T + E M+ K + G+ + ++ Y G+ D R
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGI----VVGGYCREGRVRDGLRFV 283
Query: 295 NMCKNLNHSRN-SSYISMLTALLRLNDVDGAERIV---------EEWE-SGNTCKDIRIP 343
K + N + S++ + + D DG + + EE E GN +++
Sbjct: 284 RRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVL 343
Query: 344 NLL---------------VRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRC 388
L+ + + G +EKA +++ +K D + LA GY R
Sbjct: 344 TLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRA 403
Query: 389 KDMDKAVETLKKAILAGRP 407
K+ KA E L+ I+ RP
Sbjct: 404 KEPKKAEELLETLIVESRP 422
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 117/277 (42%), Gaps = 19/277 (6%)
Query: 126 DFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLH 185
D Y A ++ + V A + I+ P ++Y ++ + ++
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPN---VVTYTALVNGLCNSSRWSDAA 245
Query: 186 DLMREMKEKNLC-NHVTLNTWLSACVTINDIDEMEKI---LAQMEVDPRATVDWFTYCTA 241
L+ +M +K + N +T + L A V + E +++ + +M +DP D TY +
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP----DIVTYSSL 301
Query: 242 ADGYTRADQFEKSLAMLKKSEKLIQGK---VTRVAYEYLLTRYAAIGKKDDVYRIW-NMC 297
+G D+ +++ M L+ K V+Y L+ + + +D +++ M
Sbjct: 302 INGLCLHDRIDEANQMFD----LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 298 KNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLE 357
+ S +Y +++ + DVD A+ + + DI N+L+ C+NG LE
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 358 KAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKA 394
KA + +R++ D + + G C+ +++A
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA 454
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 126/309 (40%), Gaps = 25/309 (8%)
Query: 142 SVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNH-- 199
V KAE ++ + + ++YN ++ + ++ + K ++ +++K ++C+
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 200 VTLNTWLSACVTINDIDEMEKILAQM---EVDPRATVDWFTYCTAADGYTRADQFEKSLA 256
VT + +S + E +L M + P T+ DGY +A +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV----TFNVLVDGYAKAGE------ 327
Query: 257 MLKKSEKLIQGKVTR-------VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SY 308
ML E I+GK+ V + L+ Y +G+ +R+W N+ +Y
Sbjct: 328 MLTAEE--IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 309 ISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLE 368
++ AL N + A ++ + S + + N ++ +C+ G + +A + + +
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 369 RDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRD 428
+ K D + L G+C M +AV K + G K +L C+ ++
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Query: 429 SELASEILR 437
+ ++I R
Sbjct: 506 AYHLNQIAR 514
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/309 (19%), Positives = 126/309 (40%), Gaps = 25/309 (8%)
Query: 142 SVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNH-- 199
V KAE ++ + + ++YN ++ + ++ + K ++ +++K ++C+
Sbjct: 218 GVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDV 277
Query: 200 VTLNTWLSACVTINDIDEMEKILAQM---EVDPRATVDWFTYCTAADGYTRADQFEKSLA 256
VT + +S + E +L M + P T+ DGY +A +
Sbjct: 278 VTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV----TFNVLVDGYAKAGE------ 327
Query: 257 MLKKSEKLIQGKVTR-------VAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SY 308
ML E I+GK+ V + L+ Y +G+ +R+W N+ +Y
Sbjct: 328 MLTAEE--IRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
Query: 309 ISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLE 368
++ AL N + A ++ + S + + N ++ +C+ G + +A + + +
Sbjct: 386 SILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEK 445
Query: 369 RDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAILAGRPGWKAYPFTLAQCIEHLKEKRD 428
+ K D + L G+C M +AV K + G K +L C+ ++
Sbjct: 446 KKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
Query: 429 SELASEILR 437
+ ++I R
Sbjct: 506 AYHLNQIAR 514
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 8/238 (3%)
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTWLSACVTINDIDEMEKILAQM 225
S+ +++ G+ EK DL+ E+ E N V T + C +I++ + + +M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 226 EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEY--LLTRYAA 283
+ TY +G + ++ M EK+ + V Y Y ++ +
Sbjct: 225 G-KLGLVANERTYTVLINGLFKNGVKKQGFEMY---EKMQEDGVFPNLYTYNCVMNQLCK 280
Query: 284 IGKKDDVYRIWNMCKNLNHSRN-SSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRI 342
G+ D +++++ + S N +Y +++ L R ++ A ++V++ +S ++
Sbjct: 281 DGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLIT 340
Query: 343 PNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKK 400
N L+ +C G L KA + L R + ++ L SG+CR D A + +K+
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 93/242 (38%), Gaps = 43/242 (17%)
Query: 168 YNVMMGLYARTGQYEKLHDLMREMKEKNLCNHV-TLNTWLSACVTINDIDEMEKI---LA 223
YN ++ AR G E++ L EM E + + T NT ++ + + E ++ L
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 224 QMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTRYAA 283
Q DP D+FTY + G+ R + + + + K+
Sbjct: 183 QAGCDP----DYFTYTSFITGHCRRKEVDAAFKVFKE----------------------- 215
Query: 284 IGKKDDVYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRIP 343
M +N H SY ++ L +D A ++ + + N C ++R
Sbjct: 216 ------------MTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 344 NLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAIL 403
+L+ C +G +A ++ E IK D ++ L +C +D+A L+ +
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 404 AG 405
G
Sbjct: 324 NG 325
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 8/132 (6%)
Query: 129 VYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLHDLM 188
V A L +A+ ++E AE + +R +E K L +S+N M+ YA+ GQ K D+
Sbjct: 532 VSSALLTMYAKKGNIESAEEVFKRQRE------KDL-VSWNSMISGYAQHGQAMKALDVF 584
Query: 189 REMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYCTAADGYTR 247
+EMK++ + + VT +AC ++E EK M D + D Y+R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 248 ADQFEKSLAMLK 259
A Q EK++ +++
Sbjct: 645 AGQLEKAMKVIE 656
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 103/237 (43%), Gaps = 8/237 (3%)
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTWLSACVTINDIDEMEKILAQM 225
+YN+++ + G+ E + E +K L N+++ + A + D K+L QM
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 226 EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVA--YEYLLTRYAA 283
+ D TY G + + ++ M KLI V+ A Y L++
Sbjct: 407 -AERGCKPDIVTYGILIHGLVVSGHMDDAVNM---KVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 284 IGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRI 342
G+ +++ + N ++ Y +++ +R D D A ++ D+
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 343 PNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLK 399
N +++ +C +G+L++A AC+ R+ E + D + + GY + +DM A++ +
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 111/258 (43%), Gaps = 18/258 (6%)
Query: 105 SKVRGLEEAEKYFWSIPETS--RDFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAK 162
SKV ++EA K + E D V + +N + V++A + R+KE M K
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKE---MKLK 570
Query: 163 GLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLC--NHVTLNTWLSACVTINDIDEMEK 220
++YN ++ + G+ ++ +L M +K C N +T NT +++ K
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG-CPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 221 ILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAYEYLLTR 280
+L +M +D D FTY T G + Q ++++ + +KL+ + LL
Sbjct: 630 MLFKM-MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLC--TLLPG 686
Query: 281 YAAIGKKDDVYR-IWNMCKNL-NHSRNSSYISMLTALLRLNDVDGAERIVEEWESGNTCK 338
+D Y+ I N N + N + ++ ++L +D A E + C+
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICR 746
Query: 339 D---IRIPNLLVRMYCEN 353
D I +P ++R C++
Sbjct: 747 DGDSILVP--IIRYSCKH 762
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 17/239 (7%)
Query: 160 PAKGLALSYNVMMGLYARTGQYEKLHDLMREMKEKNLCNHVTLNTWLSACVT-INDIDEM 218
P +G + V++G ++GQ + L EM E+ L V L T L A T N ID+
Sbjct: 122 PKEGTYMKLLVLLG---KSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDA 178
Query: 219 EKILAQMEVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKK-SEKLIQGKVTRVAYEYL 277
IL +M+ P+ D FTY T A QF+ ++ K+ E+LI V +
Sbjct: 179 FSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNT--VTQNIV 236
Query: 278 LTRYAAIGKKDDVYRIWN------MCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEW 331
L+ Y +G+ D + ++ + CK + N +L+ + +D E E++
Sbjct: 237 LSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMN----IILSVFGNMGKIDMMESWYEKF 292
Query: 332 ESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKD 390
+ + R N+L+ Y + + +K + + + + + + S ++ + + D
Sbjct: 293 RNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGD 351
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/309 (19%), Positives = 132/309 (42%), Gaps = 51/309 (16%)
Query: 126 DFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLALSYNVMMGLYARTGQYEKLH 185
D V + ++C+ ++ A + IKE +S+N M+ + + G +K
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKD-------VVSWNSMINGFVQKGSPDKAL 217
Query: 186 DLMREMKEKNL-CNHVTLNTWLSACVTINDIDEMEKILAQMEVD--------PRATVDWF 236
+L ++M+ +++ +HVT+ LSAC I +++ ++ + +E + A +D +
Sbjct: 218 ELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMY 277
Query: 237 TYC----------------------TAADGYTRADQFEKSLAMLKKSEKLIQGKVTRVAY 274
T C T DGY ++ +E + +L + Q + VA+
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN---SMPQKDI--VAW 332
Query: 275 EYLLTRYAAIGKKDD---VYRIWNMCKNLNHSRNSSYISMLTALLRLNDVDGAERIVEEW 331
L++ Y GK ++ V+ + KN+ ++ + +S L+A ++ ++ I
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQ-ITLVSTLSACAQVGALELGRWIHSYI 391
Query: 332 ESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDM 391
+ + + + L+ MY + G LEK+ + +RD+ +W + G
Sbjct: 392 KKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDV----FVWSAMIGGLAMHGCG 447
Query: 392 DKAVETLKK 400
++AV+ K
Sbjct: 448 NEAVDMFYK 456
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 104/242 (42%), Gaps = 17/242 (7%)
Query: 156 YPSMPAKGL---ALSYNVMMGLYARTGQYEKLHDLMREMKEKNL-CNHVTLNTWLSACVT 211
+ M KG+ ++Y+ ++ G++ L+ +M E+ + N VT + + A V
Sbjct: 276 FTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVK 335
Query: 212 INDIDEMEKILAQM---EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLKKSEKLIQGK 268
+ + EK+ +M +DP + FTY + +G+ D+ ++ ML E +I+
Sbjct: 336 KGKLVKAEKLYEEMIKRSIDP----NIFTYSSLINGFCMLDRLGEAKQML---ELMIRKD 388
Query: 269 V--TRVAYEYLLTRYAAIGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLNDVDGAE 325
V Y L+ + + D ++ N+ +Y +++ + D D A+
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 326 RIVEEWESGNTCKDIRIPNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGY 385
+ ++ S +I N+L+ C+NG L KA L ++ D ++ + G
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Query: 386 CR 387
C+
Sbjct: 509 CK 510
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 128/304 (42%), Gaps = 17/304 (5%)
Query: 110 LEEAEKYFWSIPETSRDFKVYGAFLNCHA---QHSSVEKAEAIMQRIKEYPSMPAKGLAL 166
LEEA + F + + F+V+ +C+ + + + K + + + K+ A+
Sbjct: 208 LEEAIQCFSKM----KRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVF 263
Query: 167 SYNVMMGLYARTGQYEKLHDLMREMKEKNLC-NHVTLNTWLSACVTINDIDEMEKILAQM 225
+YN+M+ + G E L EMK + L + VT N+ + + +D+ +M
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323
Query: 226 EVDPRATVDWFTYCTAADGYTRADQFEKSLAMLK--KSEKLIQGKVTRVAYEYLLTRYAA 283
+ D D TY + + + + L + K L K V+Y L+ +
Sbjct: 324 K-DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL---KPNVVSYSTLVDAFCK 379
Query: 284 IGKKDDVYRIWNMCKNLNHSRNS-SYISMLTALLRLNDVDGAERIVEEWESGNTCKDIRI 342
G + + + + N +Y S++ A ++ ++ A R+ E ++
Sbjct: 380 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439
Query: 343 PNLLVRMYCENGLLEKAEACIARLLERDIKFDGSIWDRLASGYCRCKDMDKAVETLKKAI 402
L+ C+ +++AE ++ + + + ++ L G+ + K+MD+A+E L +
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE-- 497
Query: 403 LAGR 406
L GR
Sbjct: 498 LKGR 501
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 126 DFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLAL---SYNVMMGLYARTGQYE 182
D Y ++ A+ +E+AE + + MP G+++ +YN M+ +Y + +
Sbjct: 328 DSLFYNCLIHTLARAGRLEEAERVFR-----VEMPELGVSINTSTYNSMIAMYCHHDEED 382
Query: 183 KLHDLMREMKEKNLCN---HVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYC 239
K +L++EM+ NLCN H T L +C D+ E+ K+L +M ++D TY
Sbjct: 383 KAIELLKEMESSNLCNPDVH-TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 240 TAADGYTRADQFEKSLAMLKKSEKLIQGKVT 270
RA+ E + + E++I +T
Sbjct: 442 FLIQRLCRANMCEWAYCLF---EEMISQDIT 469
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 15/151 (9%)
Query: 126 DFKVYGAFLNCHAQHSSVEKAEAIMQRIKEYPSMPAKGLAL---SYNVMMGLYARTGQYE 182
D Y ++ A+ +E+AE + + MP G+++ +YN M+ +Y + +
Sbjct: 328 DSLFYNCLIHTLARAGRLEEAERVFR-----VEMPELGVSINTSTYNSMIAMYCHHDEED 382
Query: 183 KLHDLMREMKEKNLCN---HVTLNTWLSACVTINDIDEMEKILAQMEVDPRATVDWFTYC 239
K +L++EM+ NLCN H T L +C D+ E+ K+L +M ++D TY
Sbjct: 383 KAIELLKEMESSNLCNPDVH-TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYT 441
Query: 240 TAADGYTRADQFEKSLAMLKKSEKLIQGKVT 270
RA+ E + + E++I +T
Sbjct: 442 FLIQRLCRANMCEWAYCLF---EEMISQDIT 469