Miyakogusa Predicted Gene

Lj0g3v0263729.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263729.1 tr|B6SXM5|B6SXM5_MAIZE ATP binding protein OS=Zea
mays PE=2 SV=1,58.33,3e-19, ,CUFF.17385.1
         (85 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16630.2 | Symbols: ATKINESIN-13A, KINESIN-13A | P-loop conta...   122   6e-29
AT3G16630.1 | Symbols: ATKINESIN-13A, KINESIN-13A | P-loop conta...   122   6e-29

>AT3G16630.2 | Symbols: ATKINESIN-13A, KINESIN-13A | P-loop
           containing nucleoside triphosphate hydrolases
           superfamily protein | chr3:5662660-5667261 REVERSE
           LENGTH=794
          Length = 794

 Score =  122 bits (305), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 56/76 (73%), Positives = 64/76 (84%)

Query: 2   GYGAQSAEEKQRLLKLMRNLNFNGESGSETYTPTTRTLGGVAASDGLYSPEFRGDFGAGL 61
           GYGAQ+AEEKQRL +LMRNLNFNGES SE+YTPT  T   + +S+G +SPEFRGDFGAGL
Sbjct: 64  GYGAQTAEEKQRLFQLMRNLNFNGESTSESYTPTAHTSAAMPSSEGFFSPEFRGDFGAGL 123

Query: 62  LDLHAMDVIELLSEDL 77
           LDLHAMD  ELLSE +
Sbjct: 124 LDLHAMDDTELLSEHV 139


>AT3G16630.1 | Symbols: ATKINESIN-13A, KINESIN-13A | P-loop
           containing nucleoside triphosphate hydrolases
           superfamily protein | chr3:5662660-5667261 REVERSE
           LENGTH=794
          Length = 794

 Score =  122 bits (305), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 56/76 (73%), Positives = 64/76 (84%)

Query: 2   GYGAQSAEEKQRLLKLMRNLNFNGESGSETYTPTTRTLGGVAASDGLYSPEFRGDFGAGL 61
           GYGAQ+AEEKQRL +LMRNLNFNGES SE+YTPT  T   + +S+G +SPEFRGDFGAGL
Sbjct: 64  GYGAQTAEEKQRLFQLMRNLNFNGESTSESYTPTAHTSAAMPSSEGFFSPEFRGDFGAGL 123

Query: 62  LDLHAMDVIELLSEDL 77
           LDLHAMD  ELLSE +
Sbjct: 124 LDLHAMDDTELLSEHV 139