Miyakogusa Predicted Gene
- Lj0g3v0263719.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0263719.1 Non Chatacterized Hit- tr|I3T0Y8|I3T0Y8_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.41,0,coiled-coil,NULL; TRANSCRIPTION FACTOR X1-LIKE,NULL;
RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED,NULL,CUFF.17380.1
(408 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00380.1 | Symbols: | XH/XS domain-containing protein | chr4... 149 4e-36
AT1G15910.1 | Symbols: | XH/XS domain-containing protein | chr1... 147 1e-35
AT3G48670.2 | Symbols: IDN2, RDM12 | XH/XS domain-containing pro... 147 2e-35
AT3G48670.1 | Symbols: IDN2, RDM12 | XH/XS domain-containing pro... 147 2e-35
AT3G12550.2 | Symbols: | XH/XS domain-containing protein | chr3... 146 3e-35
AT3G12550.1 | Symbols: | XH/XS domain-containing protein | chr3... 146 3e-35
AT4G01780.1 | Symbols: | XH/XS domain-containing protein | chr4... 137 1e-32
AT1G13790.1 | Symbols: | XH/XS domain-containing protein | chr1... 127 1e-29
AT1G80790.1 | Symbols: | XH/XS domain-containing protein | chr1... 111 1e-24
AT3G29375.1 | Symbols: | XH domain-containing protein | chr3:11... 108 7e-24
AT5G59390.1 | Symbols: | XH/XS domain-containing protein | chr5... 103 3e-22
AT4G01180.1 | Symbols: | XH/XS domain-containing protein | chr4... 91 2e-18
AT3G29375.2 | Symbols: | XH domain-containing protein | chr3:11... 68 9e-12
>AT4G00380.1 | Symbols: | XH/XS domain-containing protein |
chr4:167959-170448 FORWARD LENGTH=635
Length = 635
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 118/211 (55%), Gaps = 6/211 (2%)
Query: 181 KRKLEVMKNM---EDESLKTVGNLQTNLMXXXXXXXXXXDYCQSVI-TKERQSNDELQKA 236
K KL+VMK++ +DE+++T + + + SV+ TKERQSNDE+Q A
Sbjct: 423 KGKLQVMKHLGDDDDEAVQTKMKEMNDELDDKKAELEDLESMNSVLMTKERQSNDEIQAA 482
Query: 237 RKRMIEGIAGRSSRCANIGVKRMGELDNGPFLKA--LRAKQRNYTQRAATLCSVWENNLK 294
R++MI G+ G ++IGVKRMGELD PFL LR AATLCS W+ NLK
Sbjct: 483 RQKMIAGLTGLLGAESDIGVKRMGELDEKPFLDVCKLRYSANEARVEAATLCSTWKENLK 542
Query: 295 DPHWYPFKIITIXXXXXXXXXXXXXXLKRLKRDMGAGPYQAVVKALTEMNEYNPSGRSVV 354
+P W PFK LK+LKR+ G + AV AL EMNEYN SGR
Sbjct: 543 NPSWQPFKREGTGDGAEEVVDEDDEQLKKLKREWGKEVHNAVKAALVEMNEYNASGRYPT 602
Query: 355 SELWNHGENRRATLEEGVEFLFGHWKTKKQK 385
SELWN E R+ATL+E + F+ K K+K
Sbjct: 603 SELWNFKEGRKATLKEVITFISTDIKNLKRK 633
>AT1G15910.1 | Symbols: | XH/XS domain-containing protein |
chr1:5465951-5468723 FORWARD LENGTH=634
Length = 634
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 113/211 (53%), Gaps = 6/211 (2%)
Query: 181 KRKLEVMKNMEDESLKTVGNLQTNLMXXXXXXXXXXDYCQS----VITKERQSNDELQKA 236
K KL+VMK++ D+ + V + + +S ++TKERQSNDE+Q A
Sbjct: 422 KGKLQVMKHLGDDDDEAVQKKMKEMNDELDDKKAELEGLESMNSVLMTKERQSNDEIQAA 481
Query: 237 RKRMIEGIAGRSSRCANIGVKRMGELDNGPFLKA--LRAKQRNYTQRAATLCSVWENNLK 294
RK++I G+ G +IGVKRMGELD PFL LR AATLCS W+ NLK
Sbjct: 482 RKKLIAGLTGLLGAETDIGVKRMGELDEKPFLDVCKLRYSANEAAVEAATLCSTWQENLK 541
Query: 295 DPHWYPFKIITIXXXXXXXXXXXXXXLKRLKRDMGAGPYQAVVKALTEMNEYNPSGRSVV 354
+P W PFK LK+LKR+ G + AV AL EMNEYN SGR
Sbjct: 542 NPSWQPFKHEGTGDGAEEVVDEDDEQLKKLKREWGKEVHNAVKTALVEMNEYNASGRYTT 601
Query: 355 SELWNHGENRRATLEEGVEFLFGHWKTKKQK 385
ELWN E R+ATL+E + F+ K K+K
Sbjct: 602 PELWNFKEGRKATLKEVITFISNDIKILKRK 632
>AT3G48670.2 | Symbols: IDN2, RDM12 | XH/XS domain-containing
protein | chr3:18031240-18033615 FORWARD LENGTH=647
Length = 647
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 137/256 (53%), Gaps = 12/256 (4%)
Query: 138 DLQQKNFTEKTRKDKKEQLNAKTVXXXXXXXXXXXXXXXNHPRKRKLEVMKNM----EDE 193
D + K E R+ +KE+L+ K + K +L VMK+M + E
Sbjct: 392 DEEVKKLAEDQRR-QKEELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASDGDAE 450
Query: 194 SLKTVGNLQTNLMXXXXXXXXXXDYCQSVITKERQSNDELQKARKRMIEGIAGRSSRCAN 253
+K V + +L + Q++I +ER++NDELQ+A K ++ + ++ N
Sbjct: 451 VVKEVDIIFKDLGEKEAQLADLDKFNQTLILRERRTNDELQEAHKELVNIMKEWNT---N 507
Query: 254 IGVKRMGELDNGPFLKALRAK--QRNYTQRAATLCSVWENNLKDPHWYPFKIITIXXXXX 311
IGVKRMGEL PF+ A++ K Q++ RA + +WE+ LKD W+PFK + +
Sbjct: 508 IGVKRMGELVTKPFVDAMQQKYCQQDVEDRAVEVLQLWEHYLKDSDWHPFKRVKLENEDR 567
Query: 312 XXXX--XXXXXLKRLKRDMGAGPYQAVVKALTEMNEYNPSGRSVVSELWNHGENRRATLE 369
L+ LK D+G GPY AV KAL E+NEYNPSGR + +ELWN +++ATLE
Sbjct: 568 EVEVIDDRDEKLRELKADLGDGPYNAVTKALLEINEYNPSGRYITTELWNFKADKKATLE 627
Query: 370 EGVEFLFGHWKTKKQK 385
EGV L W+ K+K
Sbjct: 628 EGVTCLLDQWEKAKRK 643
>AT3G48670.1 | Symbols: IDN2, RDM12 | XH/XS domain-containing
protein | chr3:18031240-18033615 FORWARD LENGTH=647
Length = 647
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 137/256 (53%), Gaps = 12/256 (4%)
Query: 138 DLQQKNFTEKTRKDKKEQLNAKTVXXXXXXXXXXXXXXXNHPRKRKLEVMKNM----EDE 193
D + K E R+ +KE+L+ K + K +L VMK+M + E
Sbjct: 392 DEEVKKLAEDQRR-QKEELHEKIIRLERQRDQKQAIELEVEQLKGQLNVMKHMASDGDAE 450
Query: 194 SLKTVGNLQTNLMXXXXXXXXXXDYCQSVITKERQSNDELQKARKRMIEGIAGRSSRCAN 253
+K V + +L + Q++I +ER++NDELQ+A K ++ + ++ N
Sbjct: 451 VVKEVDIIFKDLGEKEAQLADLDKFNQTLILRERRTNDELQEAHKELVNIMKEWNT---N 507
Query: 254 IGVKRMGELDNGPFLKALRAK--QRNYTQRAATLCSVWENNLKDPHWYPFKIITIXXXXX 311
IGVKRMGEL PF+ A++ K Q++ RA + +WE+ LKD W+PFK + +
Sbjct: 508 IGVKRMGELVTKPFVDAMQQKYCQQDVEDRAVEVLQLWEHYLKDSDWHPFKRVKLENEDR 567
Query: 312 XXXX--XXXXXLKRLKRDMGAGPYQAVVKALTEMNEYNPSGRSVVSELWNHGENRRATLE 369
L+ LK D+G GPY AV KAL E+NEYNPSGR + +ELWN +++ATLE
Sbjct: 568 EVEVIDDRDEKLRELKADLGDGPYNAVTKALLEINEYNPSGRYITTELWNFKADKKATLE 627
Query: 370 EGVEFLFGHWKTKKQK 385
EGV L W+ K+K
Sbjct: 628 EGVTCLLDQWEKAKRK 643
>AT3G12550.2 | Symbols: | XH/XS domain-containing protein |
chr3:3978669-3981372 FORWARD LENGTH=638
Length = 638
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 117/212 (55%), Gaps = 11/212 (5%)
Query: 181 KRKLEVMKNME-DESLKTVGNLQT---NLMXXXXXXXXXXDYCQSVITKERQSNDELQKA 236
K +L VM+ +E D + V ++T +L + Q ++ +ER+SNDELQ+A
Sbjct: 427 KSQLSVMRLVELDSGSEIVNKVETFLRDLSETEGELAHLNQFNQDLVVQERKSNDELQEA 486
Query: 237 RKRMIEGIAGRSSRCANIGVKRMGELDNGPFLKALRAK--QRNYTQRAATLCSVWENNLK 294
R+ +I + +IGVKRMGELD PF+KA+R K Q + A + +WE LK
Sbjct: 487 RRALISNL---RDMGLHIGVKRMGELDTKPFMKAMRIKYCQEDLEDWAVEVIQLWEEYLK 543
Query: 295 DPHWYPFKIITIXXXXXXXXXXXX--XXLKRLKRDMGAGPYQAVVKALTEMNEYNPSGRS 352
DP W+PFK I + L+ LK ++G YQAV AL E+NEYNPSGR
Sbjct: 544 DPDWHPFKRIKLETAETIVEVIDEDDEKLRTLKNELGDDAYQAVANALLEINEYNPSGRY 603
Query: 353 VVSELWNHGENRRATLEEGVEFLFGHWKTKKQ 384
+ SELWN E+R+ATLEEGV L W K
Sbjct: 604 ISSELWNFREDRKATLEEGVNSLLEQWNQAKH 635
>AT3G12550.1 | Symbols: | XH/XS domain-containing protein |
chr3:3978669-3981372 FORWARD LENGTH=638
Length = 638
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 117/212 (55%), Gaps = 11/212 (5%)
Query: 181 KRKLEVMKNME-DESLKTVGNLQT---NLMXXXXXXXXXXDYCQSVITKERQSNDELQKA 236
K +L VM+ +E D + V ++T +L + Q ++ +ER+SNDELQ+A
Sbjct: 427 KSQLSVMRLVELDSGSEIVNKVETFLRDLSETEGELAHLNQFNQDLVVQERKSNDELQEA 486
Query: 237 RKRMIEGIAGRSSRCANIGVKRMGELDNGPFLKALRAK--QRNYTQRAATLCSVWENNLK 294
R+ +I + +IGVKRMGELD PF+KA+R K Q + A + +WE LK
Sbjct: 487 RRALISNL---RDMGLHIGVKRMGELDTKPFMKAMRIKYCQEDLEDWAVEVIQLWEEYLK 543
Query: 295 DPHWYPFKIITIXXXXXXXXXXXX--XXLKRLKRDMGAGPYQAVVKALTEMNEYNPSGRS 352
DP W+PFK I + L+ LK ++G YQAV AL E+NEYNPSGR
Sbjct: 544 DPDWHPFKRIKLETAETIVEVIDEDDEKLRTLKNELGDDAYQAVANALLEINEYNPSGRY 603
Query: 353 VVSELWNHGENRRATLEEGVEFLFGHWKTKKQ 384
+ SELWN E+R+ATLEEGV L W K
Sbjct: 604 ISSELWNFREDRKATLEEGVNSLLEQWNQAKH 635
>AT4G01780.1 | Symbols: | XH/XS domain-containing protein |
chr4:767310-769246 FORWARD LENGTH=472
Length = 472
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/257 (33%), Positives = 130/257 (50%), Gaps = 23/257 (8%)
Query: 137 NDLQQKNFTEKTRKDKKEQLNAKTVXXXXXXXXXXXXXXXNHPRKRKLEVMKNMEDES-- 194
N ++ +E + +KE+L+ K + K +L VMK+M +
Sbjct: 227 NGTERMKLSEDLEQRQKEELHEKIIRLERQIDQVQAIELEVEQLKGQLNVMKHMASDGDA 286
Query: 195 --LKTVGNLQTNLMXXXXXXXXXXDYCQSVITKERQSNDELQKARKRMIEGIAGRSSRCA 252
+K V + +L+ + Q++I +ER++NDELQ+ARK ++ C
Sbjct: 287 QVVKEVDIIFKDLVEKEAELADLNKFNQTLILRERRTNDELQEARKELV--------NC- 337
Query: 253 NIGVKRMGELDNGPFLKALRAK--QRNYTQRAATLCSVWENNLKDPHWYPFKIITIXXXX 310
MGEL PF+ A++ K Q + RA + +WE+ + DP W+P+K + +
Sbjct: 338 ------MGELVRKPFVDAMQQKYCQEDVEDRAVEVLQLWEHYINDPDWHPYKRVKLENQD 391
Query: 311 XXXXXX--XXXXLKRLKRDMGAGPYQAVVKALTEMNEYNPSGRSVVSELWNHGENRRATL 368
L+ LK D+G GPY AV KAL E+NEYNPSGR + +ELWN E++RATL
Sbjct: 392 REVEVIDDRDEKLRELKADLGDGPYNAVTKALLEINEYNPSGRYITTELWNFKEDKRATL 451
Query: 369 EEGVEFLFGHWKTKKQK 385
EEGV L W+ K+K
Sbjct: 452 EEGVTCLLDQWEKAKRK 468
>AT1G13790.1 | Symbols: | XH/XS domain-containing protein |
chr1:4727438-4730229 FORWARD LENGTH=736
Length = 736
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 95/162 (58%), Gaps = 3/162 (1%)
Query: 220 QSVITKERQSNDELQKARKRMIEGIAGRSSRCANIGVKRMGELDNGPFLKALRAKQR--N 277
Q+++ K +NDELQ ARK +I + ++R A IGVKRMG LD PF K + K
Sbjct: 566 QTLVVKHGYTNDELQDARKALIRSMRELTTR-AYIGVKRMGALDETPFKKVAKEKYPAVE 624
Query: 278 YTQRAATLCSVWENNLKDPHWYPFKIITIXXXXXXXXXXXXXXLKRLKRDMGAGPYQAVV 337
++A LCS+WE +L D W+P K++ L+ L++++G Y AV
Sbjct: 625 ADKKAEELCSLWEEHLGDSAWHPIKVVEKDGIAKEELNEEDEKLQELRKELGEEVYAAVT 684
Query: 338 KALTEMNEYNPSGRSVVSELWNHGENRRATLEEGVEFLFGHW 379
+AL E NEYN SGR +V ELWN +NR+A+++EGV +L W
Sbjct: 685 QALKERNEYNGSGRYIVPELWNFKQNRKASIKEGVVYLVNSW 726
>AT1G80790.1 | Symbols: | XH/XS domain-containing protein |
chr1:30360280-30362856 FORWARD LENGTH=634
Length = 634
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 95/172 (55%), Gaps = 3/172 (1%)
Query: 217 DYCQSVITKERQSNDELQKARKRMIEGIAGRSSRCANIGVKRMGELDNGPFLKALRAK-- 274
D +++ KER+SNDE+ +ARK +I + S I VKRMGEL+ PF+ A R +
Sbjct: 461 DTNSALMVKERKSNDEIVEARKFLITELRELVSDRNIIRVKRMGELEEKPFMTACRQRCT 520
Query: 275 -QRNYTQRAATLCSVWENNLKDPHWYPFKIITIXXXXXXXXXXXXXXLKRLKRDMGAGPY 333
+ + A LCS W+ +KD W PFK + +K+L+ + G
Sbjct: 521 VEEEAQVQYAMLCSKWQEKVKDSAWQPFKHVGTGDRKKEVVDEEDEEIKKLREEWGEEVK 580
Query: 334 QAVVKALTEMNEYNPSGRSVVSELWNHGENRRATLEEGVEFLFGHWKTKKQK 385
AV AL E+NE+NPSGR V ELWN + R+ATL+E ++++ KT K++
Sbjct: 581 NAVKTALEELNEFNPSGRYSVPELWNSKQGRKATLKEVIDYITQQVKTLKRR 632
>AT3G29375.1 | Symbols: | XH domain-containing protein |
chr3:11280151-11281829 FORWARD LENGTH=355
Length = 355
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 88/167 (52%), Gaps = 3/167 (1%)
Query: 219 CQSVITKERQSNDELQKARKRMIEGIAGRSSRCANIGVKRMGELDNGPFLKALRAKQRNY 278
+++ KER +NDE+ +A+K +I + + I VKRMG LD PF+KA +R
Sbjct: 185 INALLVKERYANDEILEAQKLLISQMRDLTDDRTTIRVKRMGHLDVEPFVKA---SKRRL 241
Query: 279 TQRAATLCSVWENNLKDPHWYPFKIITIXXXXXXXXXXXXXXLKRLKRDMGAGPYQAVVK 338
T + + WE NL+DPHW PFK + LK L+ + G AV
Sbjct: 242 TGNDTEVYAEWEENLRDPHWQPFKRVETGNIVKEVVDEEDEKLKNLREEWGEEVMNAVKT 301
Query: 339 ALTEMNEYNPSGRSVVSELWNHGENRRATLEEGVEFLFGHWKTKKQK 385
AL E+NE+NPSGR VV LWN + R ATL E + + KT K+K
Sbjct: 302 ALEEVNEFNPSGRHVVPTLWNSEQGRVATLREVIAHMTHEIKTLKRK 348
>AT5G59390.1 | Symbols: | XH/XS domain-containing protein |
chr5:23954934-23957151 FORWARD LENGTH=561
Length = 561
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 221 SVITKERQSNDELQKARKRMIEGIAGRSS--RCANIGVKRMGELDNGPFLKALRAK---- 274
++ KER +NDE Q K MI+ + I VKRMG+L+ PFL A+ K
Sbjct: 382 TLARKERATNDEYQDVLKEMIQVWNANEELMKQEKIRVKRMGQLNPAPFLPAVMKKHKVT 441
Query: 275 QRNYTQRAATLCSVWENNLKDPHWYPFKIITIXXXXXXXXXXXXXXLKRLKRDMGAGPYQ 334
Q +A LCSVWE N+ D W PF++ L+ LK G Y
Sbjct: 442 QSKAENKAMKLCSVWEANIGDVQWTPFRVDESDGTPKRVVDENDEKLRTLKNQYGEEVYN 501
Query: 335 AVVKALTEMNEYNPSGRSVVSELWNHGENRRATLEEGVEFLF 376
VV+ E+ E+N SG V+ ELWN+ ENR+AT+EE + +
Sbjct: 502 EVVRTKLEIEEHNASGSYVILELWNYEENRKATMEEATDVML 543
>AT4G01180.1 | Symbols: | XH/XS domain-containing protein |
chr4:501287-503394 REVERSE LENGTH=554
Length = 554
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 80/172 (46%), Gaps = 21/172 (12%)
Query: 221 SVITKERQSNDELQKARKRMIEGIAGRSS--RCANIGVKRMGELDNGPFLKALRAKQRNY 278
++ KER +NDE Q ARK MI+ + I VK MGEL+ PFL A+ K +
Sbjct: 372 TLARKERATNDEYQDARKEMIKVWKANEELMKQEKIRVKIMGELNPAPFLPAVMNKHK-- 429
Query: 279 TQRAATLCSVWENNLKDPHWYPFKI----------ITIXXXX----XXXXXXXXXXLKRL 324
A LCSVW + D W PF++ + I L+ L
Sbjct: 430 ---AMMLCSVWAAEIGDVQWTPFRVDESDGTPKQKLHISQHSKCEMQRVVDENDEKLRML 486
Query: 325 KRDMGAGPYQAVVKALTEMNEYNPSGRSVVSELWNHGENRRATLEEGVEFLF 376
K G Y VV+A EM E+N SG ELWN+ ENR+AT+EE + +
Sbjct: 487 KNQYGEEVYSEVVRAKLEMEEHNASGSYETEELWNYEENRKATIEEITDVML 538
>AT3G29375.2 | Symbols: | XH domain-containing protein |
chr3:11280882-11281573 FORWARD LENGTH=176
Length = 176
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 3/82 (3%)
Query: 221 SVITKERQSNDELQKARKRMIEGIAGRSSRCANIGVKRMGELDNGPFLKALRAKQRNYTQ 280
+++ KER +NDE+ +A+K +I + + I VKRMG LD PF+K A +R T
Sbjct: 64 ALLVKERYANDEILEAQKLLISQMRDLTDDRTTIRVKRMGHLDVEPFVK---ASKRRLTG 120
Query: 281 RAATLCSVWENNLKDPHWYPFK 302
+ + WE NL+DPHW PFK
Sbjct: 121 NDTEVYAEWEENLRDPHWQPFK 142