Miyakogusa Predicted Gene
- Lj0g3v0263509.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0263509.1 Non Chatacterized Hit- tr|I3S0H9|I3S0H9_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.6,0,NAD(P)-binding Rossmann-fold domains,NULL; no
description,NAD(P)-binding domain; NAD_binding_10,NULL,CUFF.17370.1
(250 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37660.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 437 e-123
AT5G02240.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 407 e-114
AT4G31530.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 103 1e-22
AT4G31530.2 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 99 2e-21
AT2G34460.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 90 1e-18
AT3G18890.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 72 3e-13
AT1G16720.1 | Symbols: HCF173 | high chlorophyll fluorescence ph... 57 1e-08
AT4G18810.1 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 50 2e-06
AT4G18810.2 | Symbols: | NAD(P)-binding Rossmann-fold superfami... 49 2e-06
AT1G15950.2 | Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reduct... 48 5e-06
AT1G15950.1 | Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reduct... 48 7e-06
>AT2G37660.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:15795481-15796977 REVERSE LENGTH=325
Length = 325
Score = 437 bits (1125), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/250 (82%), Positives = 231/250 (92%), Gaps = 2/250 (0%)
Query: 3 PSTVLVTGAGGRTGQIVYKTLKER--QYVARGLVRTEESKQKIGGADDVFIGDIRDAGSI 60
P TVLVTGAGGRTGQIVYK LKER Q+VARGLVRT+ESK+KI G D+VFIGDIRD SI
Sbjct: 76 PLTVLVTGAGGRTGQIVYKKLKERSEQFVARGLVRTKESKEKINGEDEVFIGDIRDTASI 135
Query: 61 VPAIQGIDALIILTSATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDAAKAA 120
PA++GIDAL+ILTSA P+MKPGFDP+KGGRPEF+FDDGAYPEQVDWIGQKNQIDAAKAA
Sbjct: 136 APAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAA 195
Query: 121 GVKRVVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRPGGLLDKDGG 180
GVK++VLVGSMGGTN+NHPLNS+GN NILVWKRKAEQYLADSGIPYTIIR GGL DKDGG
Sbjct: 196 GVKQIVLVGSMGGTNINHPLNSIGNANILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGG 255
Query: 181 LRELILGKDDELLQTETKTIPRADVAEVCVQALNYEETQFKAFDLASKPEGVGTPTKDFK 240
+REL++GKDDELL+TET+TI RADVAEVCVQAL EE +FKA DLASKPEG GTPTKDFK
Sbjct: 256 IRELLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTKDFK 315
Query: 241 ALFSQITSRF 250
ALF+Q+T++F
Sbjct: 316 ALFTQVTTKF 325
>AT5G02240.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr5:451502-452984 FORWARD LENGTH=253
Length = 253
Score = 407 bits (1046), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/248 (80%), Positives = 220/248 (88%), Gaps = 2/248 (0%)
Query: 5 TVLVTGAGGRTGQIVYKTLKE--RQYVARGLVRTEESKQKIGGADDVFIGDIRDAGSIVP 62
TVLVTGA GRTGQIVYK LKE ++VA+GLVR+ + K+KIGG DVFIGDI DA SI P
Sbjct: 6 TVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINP 65
Query: 63 AIQGIDALIILTSATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDAAKAAGV 122
A QGIDAL+ILTSA PKMKPGFDPTKGGRPEF F+DG YPEQVDWIGQKNQIDAAK AGV
Sbjct: 66 AFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGV 125
Query: 123 KRVVLVGSMGGTNLNHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRPGGLLDKDGGLR 182
K +V+VGSMGGTN +HPLN LGNGNILVWKRKAEQYLADSG PYTIIR GGLLDK+GG+R
Sbjct: 126 KHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR 185
Query: 183 ELILGKDDELLQTETKTIPRADVAEVCVQALNYEETQFKAFDLASKPEGVGTPTKDFKAL 242
EL++GKDDELLQT+TKT+PRADVAEVC+QAL +EE + KAFDL SKPEG TPTKDFKAL
Sbjct: 186 ELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKAL 245
Query: 243 FSQITSRF 250
FSQ+TSRF
Sbjct: 246 FSQVTSRF 253
>AT4G31530.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:15282281-15284064 FORWARD LENGTH=324
Length = 324
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 127/250 (50%), Gaps = 39/250 (15%)
Query: 22 TLKERQYVARGLVRTEESKQKIGGADD-----VFIGDIRDAGSIVPAI-QGIDALIILTS 75
+L +R +R L+R + K+ G D V GD R+A + P++ +G+ +I T
Sbjct: 92 SLLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGDTRNAEDLDPSMFEGVTHVICTTG 151
Query: 76 ATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDAAKAAGVKRVVLVGSMGGTN 135
T P +++ PE+VDW G KN I A ++ VKRVVLV S+G T
Sbjct: 152 TT------------AFPSKRWNEENTPEKVDWEGVKNLISALPSS-VKRVVLVSSVGVTK 198
Query: 136 LNH-PLNSLGNGNILVWKRKAEQYLADSGIPYTIIRPGGLLD--------------KDGG 180
N P + + +L +K+ E +L DSG+P+TIIRPG L D G
Sbjct: 199 SNELPWSIMNLFGVLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGE 258
Query: 181 LRELILGKDDELLQTETKTIPRADVAEVCVQALNYEETQFKAFDLAS-KPEGVGTPTKDF 239
R +++G+ D L+ + R VAE C+QAL+ E TQ KA+++ S K +G G+ + +
Sbjct: 259 RRAVVIGQGDNLV----GEVSRLVVAEACIQALDIEFTQGKAYEINSVKGDGPGSDPQQW 314
Query: 240 KALFSQITSR 249
+ LF S+
Sbjct: 315 RELFKAAESK 324
>AT4G31530.2 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:15282281-15284064 FORWARD LENGTH=338
Length = 338
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 115/227 (50%), Gaps = 38/227 (16%)
Query: 22 TLKERQYVARGLVRTEESKQKIGGADD-----VFIGDIRDAGSIVPAI-QGIDALIILTS 75
+L +R +R L+R + K+ G D V GD R+A + P++ +G+ +I T
Sbjct: 92 SLLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGDTRNAEDLDPSMFEGVTHVICTTG 151
Query: 76 ATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDAAKAAGVKRVVLVGSMGGTN 135
T P +++ PE+VDW G KN I A ++ VKRVVLV S+G T
Sbjct: 152 TT------------AFPSKRWNEENTPEKVDWEGVKNLISALPSS-VKRVVLVSSVGVTK 198
Query: 136 LNH-PLNSLGNGNILVWKRKAEQYLADSGIPYTIIRPGGLLD--------------KDGG 180
N P + + +L +K+ E +L DSG+P+TIIRPG L D G
Sbjct: 199 SNELPWSIMNLFGVLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGE 258
Query: 181 LRELILGKDDELLQTETKTIPRADVAEVCVQALNYEETQFKAFDLAS 227
R +++G+ D L+ + R VAE C+QAL+ E TQ KA+++ S
Sbjct: 259 RRAVVIGQGDNLV----GEVSRLVVAEACIQALDIEFTQGKAYEINS 301
>AT2G34460.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr2:14529635-14530732 FORWARD LENGTH=280
Length = 280
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 122/252 (48%), Gaps = 34/252 (13%)
Query: 6 VLVTGAGGRTGQIVYKTLKERQYVARGLVRTEESKQKIGGADD----VFIGDIRDAGSIV 61
V V GA G+TG+ + + L R + + VR E K K DD + D+ + +
Sbjct: 49 VFVAGATGQTGKRIVEQLLSRGFAVKAGVRDVE-KAKTSFKDDPSLQIVRADVTEGPDKL 107
Query: 62 PAIQGIDALIILTSATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDAAKAAG 121
+ G D+ ++ + +PGFD P +VD G N +DA + G
Sbjct: 108 AEVIGDDSQAVICATG--FRPGFDIFT-------------PWKVDNFGTVNLVDACRKQG 152
Query: 122 VKRVVLVGSM--GGTNLNHPLNS---LGN--GNILVWKRKAEQYLADSGIPYTIIRPGGL 174
V++ VLV S+ G + LN N G LV K +AE+Y+ SGI YTI+RPGG
Sbjct: 153 VEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGG- 211
Query: 175 LDKDGGLRELILGKDDELLQTETKTIPRADVAEVCVQALNYEETQFKAFDLASKPEGVGT 234
L D +++ +D L + +I R VAEV V+AL EE+ FK ++ ++ E
Sbjct: 212 LKNDPPTGNVVMEPEDTLYEG---SISRDLVAEVAVEALLQEESSFKVVEIVARAEA--- 265
Query: 235 PTKDFKALFSQI 246
P + +K LF+ +
Sbjct: 266 PKRSYKDLFASV 277
>AT3G18890.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr3:6511169-6514729 FORWARD LENGTH=641
Length = 641
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 87/210 (41%), Gaps = 37/210 (17%)
Query: 6 VLVTGAGGRTGQIVYKTLKERQYVARGLVRTEE---------SKQKIGGADD-------- 48
V V GA G+ G + L + + R VR+ + + K+ D+
Sbjct: 84 VFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQSVKEMKLQNTDEGTQPVEKL 143
Query: 49 -VFIGDIRDAGSIVPAIQGIDALIILTSATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDW 107
+ D+ SI PA+ +I A+ E D P ++D+
Sbjct: 144 EIVECDLEKKDSIQPALGNASVIICCIGAS---------------EKEISDITGPYRIDY 188
Query: 108 IGQKNQIDAAKAAGVKRVVLVGSMGGTNLNHPLNSLG-NGNILVWKRKAEQYLADSGIPY 166
+ KN +DAA +A V +LV S+G P L +L WKRKAE+ L +SG+ Y
Sbjct: 189 LATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALIESGLNY 248
Query: 167 TIIRPGGLLDKDGGLRE---LILGKDDELL 193
I+RPGG+ +E L L DD L
Sbjct: 249 AIVRPGGMERPTDAYKETHNLTLALDDTLF 278
>AT1G16720.1 | Symbols: HCF173 | high chlorophyll fluorescence
phenotype 173 | chr1:5723161-5726248 FORWARD LENGTH=598
Length = 598
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 147 NILVWKRKAEQYLADSGIPYTIIRPGGLLDKDGGLRELILGKDDELLQTETKTIPRADVA 206
+L KR E L SG+ YTIIRPG L ++ GG R LI + + + Q I ADVA
Sbjct: 486 QVLKAKRAGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRISQ----GISCADVA 541
Query: 207 EVCVQALNYEETQFKAFDLASK 228
++CV+AL+ + K+FD+ +
Sbjct: 542 DICVKALHDSTARNKSFDVCHE 563
>AT4G18810.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:10322622-10325735 REVERSE LENGTH=596
Length = 596
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 124 RVVLVGSMGGTNLNHPLNSLGNGN-----------ILVWKRKAEQYLADSGIPYTIIRPG 172
R V VGS G T P L IL +K K E + DSGIP+ I+RP
Sbjct: 442 RFVHVGSAGVTRPERPGLDLSKQPPAVRLNKELDFILTYKLKGEDLIRDSGIPFAIVRPC 501
Query: 173 GLLDKDGGLRELILGKDDELLQTETKTIPRADVAEVCVQALNYEETQFKAFDLAS 227
L ++ G +LI + D + T + R +VA +C+ AL K F++ S
Sbjct: 502 ALTEEPAGA-DLIFEQGDNI----TGKVSRDEVARICIAALESPYALNKTFEVKS 551
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 6 VLVTGAGGRTGQIVYKTLKERQYVARGLVRTEESKQKIGGAD-DVFIGDIRDAGSIVP-A 63
+LV GA G G+ + L++R + LVR EE +K+ G + D+ + DI ++VP
Sbjct: 125 ILVAGATGGVGRRIVDILRKRGLPVKALVRNEEKARKMLGPEIDLIVADITKENTLVPEK 184
Query: 64 IQGIDALIILTSATPKMKPGFDP-----TKGGRPEFYFD---DGAYPEQVDWIGQKNQID 115
+G+ +I S K G P +G R +F+ G PE V++IG KN I+
Sbjct: 185 FKGVRKVINAVSVIVGPKEGDTPERQKYNQGVR---FFEPEIKGDSPELVEYIGMKNLIN 241
Query: 116 AAK 118
A +
Sbjct: 242 AVR 244
>AT4G18810.2 | Symbols: | NAD(P)-binding Rossmann-fold superfamily
protein | chr4:10322263-10325735 REVERSE LENGTH=627
Length = 627
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 124 RVVLVGSMGGTNLNHPLNSLGNGN-----------ILVWKRKAEQYLADSGIPYTIIRPG 172
R V VGS G T P L IL +K K E + DSGIP+ I+RP
Sbjct: 442 RFVHVGSAGVTRPERPGLDLSKQPPAVRLNKELDFILTYKLKGEDLIRDSGIPFAIVRPC 501
Query: 173 GLLDKDGGLRELILGKDDELLQTETKTIPRADVAEVCVQALNYEETQFKAFDLASK---- 228
L ++ G +LI + D + T + R +VA +C+ AL K F++ S
Sbjct: 502 ALTEEPAGA-DLIFEQGDNI----TGKVSRDEVARICIAALESPYALNKTFEVKSTVPFS 556
Query: 229 ------PEGVGTPTKDFKALFSQI 246
PE P KD+ F +
Sbjct: 557 EPFTVDPEN-PPPEKDYNEYFKTL 579
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 13/123 (10%)
Query: 6 VLVTGAGGRTGQIVYKTLKERQYVARGLVRTEESKQKIGGAD-DVFIGDIRDAGSIVP-A 63
+LV GA G G+ + L++R + LVR EE +K+ G + D+ + DI ++VP
Sbjct: 125 ILVAGATGGVGRRIVDILRKRGLPVKALVRNEEKARKMLGPEIDLIVADITKENTLVPEK 184
Query: 64 IQGIDALIILTSATPKMKPGFDPTK-----GGRPEFYFD---DGAYPEQVDWIGQKNQID 115
+G+ +I S K G P + G R +F+ G PE V++IG KN I+
Sbjct: 185 FKGVRKVINAVSVIVGPKEGDTPERQKYNQGVR---FFEPEIKGDSPELVEYIGMKNLIN 241
Query: 116 AAK 118
A +
Sbjct: 242 AVR 244
>AT1G15950.2 | Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase
1 | chr1:5478855-5481949 FORWARD LENGTH=337
Length = 337
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 5 TVLVTGAGGRTGQIVYKTLKERQYVARGLVRTEESKQKI------GGADDVFI--GDIRD 56
TV VTGAGG + K L ER Y +G VR + + GG + + + D++D
Sbjct: 12 TVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD 71
Query: 57 AGSIVPAIQGIDALIILTSATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDA 116
++ AI G D + +A+P DP + P G K I+A
Sbjct: 72 YEALKAAIDGCDG--VFHTASPVTD---DPEQMVEPAVN-------------GAKFVINA 113
Query: 117 AKAAGVKRVVLVGSMGGTNLN 137
A A VKRVV+ S+G ++
Sbjct: 114 AAEAKVKRVVITSSIGAVYMD 134
>AT1G15950.1 | Symbols: CCR1, IRX4, ATCCR1 | cinnamoyl coa reductase
1 | chr1:5478855-5481915 FORWARD LENGTH=344
Length = 344
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 62/141 (43%), Gaps = 26/141 (18%)
Query: 5 TVLVTGAGGRTGQIVYKTLKERQYVARGLVRTEESKQKI------GGADDVFI--GDIRD 56
TV VTGAGG + K L ER Y +G VR + + GG + + + D++D
Sbjct: 12 TVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD 71
Query: 57 AGSIVPAIQGIDALIILTSATPKMKPGFDPTKGGRPEFYFDDGAYPEQVDWIGQKNQIDA 116
++ AI G D + +A+P DP + P G K I+A
Sbjct: 72 YEALKAAIDGCDG--VFHTASPVTD---DPEQMVEPAVN-------------GAKFVINA 113
Query: 117 AKAAGVKRVVLVGSMGGTNLN 137
A A VKRVV+ S+G ++
Sbjct: 114 AAEAKVKRVVITSSIGAVYMD 134