Miyakogusa Predicted Gene

Lj0g3v0263419.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263419.1 tr|Q1LYT2|Q1LYT2_ARATH At5g06070 OS=Arabidopsis
thaliana PE=2 SV=1,51.4,9e-19,zf-C2H2_6,NULL; seg,NULL; C2H2 and C2HC
zinc fingers,NULL; ZINC_FINGER_C2H2_1,Zinc finger, C2H2;
ZIN,CUFF.17363.1
         (288 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |...   102   4e-22
AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers sup...    96   3e-20
AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    90   2e-18
AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |...    82   5e-16
AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc fin...    81   8e-16
AT3G09290.1 | Symbols: TAC1 | telomerase activator1 | chr3:28561...    63   3e-10
AT3G53820.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    59   5e-09
AT5G43540.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    57   2e-08
AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 | chr1:87260...    53   3e-07
AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 | chr1:25016...    51   1e-06
AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 | ch...    49   3e-06
AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    49   4e-06
AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 | ch...    49   5e-06
AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    48   8e-06

>AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |
           chr2:15827706-15828620 REVERSE LENGTH=304
          Length = 304

 Score =  102 bits (253), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/105 (55%), Positives = 70/105 (66%), Gaps = 14/105 (13%)

Query: 29  WEEQAFAED-AAGSLVGGCTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSS 87
           WEE AFAED AAGSL     WPPRSY+CSFCRREF+SAQALGGHMNVHR+DRARLKQ   
Sbjct: 19  WEELAFAEDDAAGSL-----WPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQ--- 70

Query: 88  PQNNEILFPHDLETHQTPFSAPSLGNYLAPYPPPVYDLAYKTNPN 132
             +++ LFP   ++  +P   PS  +    +    Y L + T PN
Sbjct: 71  -ADDQYLFP---KSSSSP-EYPSHKDSDNIHETSCYTLVFNTKPN 110


>AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers
           superfamily protein | chr5:1828426-1829106 REVERSE
           LENGTH=226
          Length = 226

 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 47/75 (62%), Positives = 54/75 (72%), Gaps = 1/75 (1%)

Query: 30  EEQAFAEDAAGSLVGGCTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPS-SP 88
           EE+AFA        GGC WPPRSYSCSFC REF+SAQALGGHMNVHR+DRARLKQ S SP
Sbjct: 32  EERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLSP 91

Query: 89  QNNEILFPHDLETHQ 103
            + +   P + +  Q
Sbjct: 92  SSTDQATPPECDRQQ 106


>AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
          protein | chr4:9906918-9907532 FORWARD LENGTH=204
          Length = 204

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/52 (73%), Positives = 45/52 (86%), Gaps = 1/52 (1%)

Query: 29 WEEQAFAEDAAGSLVGGCTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRA 80
          WE +AF +D  G+ + G TWPPRSY+C+FCRREFRSAQALGGHMNVHR+DRA
Sbjct: 23 WEVKAFEQDTKGN-ISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73


>AT2G42410.1 | Symbols: ZFP11, ATZFP11 | zinc finger protein 11 |
           chr2:17658150-17658794 FORWARD LENGTH=214
          Length = 214

 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 8/68 (11%)

Query: 43  VGGCTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSPQNNEILFPHDLETH 102
            G   WPP++Y+CSFCRREFRSAQALGGHMNVHR+DRA+L+Q  S     +  PH    H
Sbjct: 39  AGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS----WLFEPH----H 90

Query: 103 QTPFSAPS 110
            TP + P+
Sbjct: 91  HTPIANPN 98


>AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc
          fingers superfamily protein | chr3:8242504-8243118
          FORWARD LENGTH=204
          Length = 204

 Score = 81.3 bits (199), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 33/39 (84%), Positives = 38/39 (97%)

Query: 45 GCTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLK 83
          G +WPPRSY+CSFC+REFRSAQALGGHMNVHR+DRARL+
Sbjct: 39 GFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 77


>AT3G09290.1 | Symbols: TAC1 | telomerase activator1 |
          chr3:2856141-2856659 FORWARD LENGTH=172
          Length = 172

 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 25/36 (69%), Positives = 30/36 (83%)

Query: 50 PRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQP 85
           RSY CSFC R F +AQALGGHMN+HR+DRA+L+Q 
Sbjct: 32 SRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67


>AT3G53820.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
          protein | chr3:19938706-19939134 FORWARD LENGTH=142
          Length = 142

 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 29/36 (80%)

Query: 51 RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPS 86
          R Y C FC R F +AQALGGHMN+HRKDRA+L+Q +
Sbjct: 19 RPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQAN 54


>AT5G43540.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:17496993-17497406 FORWARD LENGTH=137
          Length = 137

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)

Query: 53  YSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSPQNNEILFPHDLETHQTPFSAPSLG 112
           Y C+FC+R F +AQALGGHMN+HR+D  RL +     + ++      +TH+    A  LG
Sbjct: 35  YECTFCKRGFTNAQALGGHMNIHRRD--RLNKAKVQNDADVALS---QTHRCFHVASDLG 89

Query: 113 NY 114
            Y
Sbjct: 90  GY 91


>AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 |
          chr1:8726009-8726638 REVERSE LENGTH=209
          Length = 209

 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 20/39 (51%), Positives = 29/39 (74%)

Query: 46 CTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
          C   PR +SC++CRR+F S+QALGGH N H+++R   K+
Sbjct: 52 CEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR 90


>AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 |
           chr1:25016644-25017237 FORWARD LENGTH=197
          Length = 197

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 37/74 (50%), Gaps = 3/74 (4%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSPQNNEILFPHDLETHQTPFS--- 107
           R Y C +C REF ++QALGGH N H+K+R  LK+        +   H+   H  P     
Sbjct: 39  RKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMLATRGLPRHHNFHPHTNPLLSAF 98

Query: 108 APSLGNYLAPYPPP 121
           AP       P+PPP
Sbjct: 99  APLPHLLSQPHPPP 112


>AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 |
          chr1:30339493-30340179 REVERSE LENGTH=228
          Length = 228

 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 28/35 (80%)

Query: 50 PRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
          PR +SC++C+R+F S+QALGGH N H+++R   K+
Sbjct: 65 PRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKR 99


>AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:335630-336277 FORWARD LENGTH=215
          Length = 215

 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 26/91 (28%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQPSSPQNNEILFPHDLETHQTPFSAPS 110
           R ++C+FC++EF ++QALGGH N H+++R+  K+                  +   + P 
Sbjct: 65  RVFACTFCKKEFSTSQALGGHQNAHKQERSLAKR----------------RKEIEINYPE 108

Query: 111 LGNYLAPYPPPV---------YDLAYKTNPN 132
           L  Y + YPP           YDL  + NPN
Sbjct: 109 LSIY-SQYPPSGLSFSSSSSQYDLGVRYNPN 138


>AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 |
          chr5:23296019-23296471 FORWARD LENGTH=150
          Length = 150

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/39 (48%), Positives = 28/39 (71%)

Query: 46 CTWPPRSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
          C   PR +SC++C+R+F S+QALGGH N H+ +R   K+
Sbjct: 45 CLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83


>AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr1:25621678-25622412 REVERSE LENGTH=244
          Length = 244

 Score = 47.8 bits (112), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 26/34 (76%)

Query: 51  RSYSCSFCRREFRSAQALGGHMNVHRKDRARLKQ 84
           R Y C +C REF ++QALGGH N H+K+R +LK+
Sbjct: 71  RKYECQYCCREFGNSQALGGHQNAHKKERQQLKR 104