Miyakogusa Predicted Gene

Lj0g3v0263019.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0263019.1 Non Chatacterized Hit- tr|I1KL09|I1KL09_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.11428
PE,81.17,0,DUF1084,Domain of unknown function DUF1084; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.17330.1
         (230 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein...   288   1e-78
AT1G14530.2 | Symbols: THH1 | Protein of unknown function (DUF10...   288   3e-78
AT1G14530.1 | Symbols: THH1 | Protein of unknown function (DUF10...   288   3e-78
AT4G21790.1 | Symbols: TOM1, ATTOM1 | tobamovirus multiplication...   197   5e-51

>AT2G02180.1 | Symbols: TOM3 | tobamovirus multiplication protein 3
           | chr2:560976-562961 FORWARD LENGTH=303
          Length = 303

 Score =  288 bits (738), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 141/207 (68%), Positives = 161/207 (77%)

Query: 8   VPAVKLTDSYSWWRDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYGWTTQ 67
           V  + L ++ +WW D+N+SP WQD IFH LAVLYG+VS VA+IQLVRIQLRVPEYGWTTQ
Sbjct: 24  VEMLNLKEASNWWSDVNESPIWQDRIFHVLAVLYGIVSLVAVIQLVRIQLRVPEYGWTTQ 83

Query: 68  KVFHFLNCLVNGVRCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWAEIYY 127
           KVFHFLN +VNGVR +VF+F RNVQ + PEILQHILLD+PSLAFFTTYALLVLFWAEIYY
Sbjct: 84  KVFHFLNFVVNGVRAVVFVFRRNVQFMQPEILQHILLDIPSLAFFTTYALLVLFWAEIYY 143

Query: 128 QARAVSSDGLKPSFYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXXXXXX 187
           QARAVS+DGL+PSF+TIN VVY +Q         KPV  +VILSK+FFAG+S        
Sbjct: 144 QARAVSTDGLRPSFFTINAVVYVVQIALWLVLWWKPVRVMVILSKMFFAGVSLFAALGFL 203

Query: 188 XXXXXXXXXXQRFPVESKGRRKKLQEV 214
                     QRFPVESKGRRKKLQEV
Sbjct: 204 LYGGRLFLMLQRFPVESKGRRKKLQEV 230


>AT1G14530.2 | Symbols: THH1 | Protein of unknown function (DUF1084)
           | chr1:4971420-4973597 REVERSE LENGTH=293
          Length = 293

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 140/211 (66%), Positives = 161/211 (76%)

Query: 4   NSVPVPAVKLTDSYSWWRDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYG 63
           +S  + A  L +  +WW D+N+SP WQD IFH LAVLYG+VS +A+IQLVRIQLRVPEYG
Sbjct: 10  SSSAIVAFNLKEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYG 69

Query: 64  WTTQKVFHFLNCLVNGVRCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWA 123
           WTTQKVFHFLN +VNGVR LVF+F R+ Q + PEILQHILLD+PSLAFFTTYALLVLFWA
Sbjct: 70  WTTQKVFHFLNFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWA 129

Query: 124 EIYYQARAVSSDGLKPSFYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXX 183
           EIYYQARAVS+DGL+PSF+TIN VVY IQ         KPV  +VI+SK+FFAG+S    
Sbjct: 130 EIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAA 189

Query: 184 XXXXXXXXXXXXXXQRFPVESKGRRKKLQEV 214
                         QRFPVESKGRRKKLQEV
Sbjct: 190 LGFLLYGGRLFLMLQRFPVESKGRRKKLQEV 220


>AT1G14530.1 | Symbols: THH1 | Protein of unknown function (DUF1084)
           | chr1:4971420-4973597 REVERSE LENGTH=293
          Length = 293

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 140/211 (66%), Positives = 161/211 (76%)

Query: 4   NSVPVPAVKLTDSYSWWRDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQLRVPEYG 63
           +S  + A  L +  +WW D+N+SP WQD IFH LAVLYG+VS +A+IQLVRIQLRVPEYG
Sbjct: 10  SSSAIVAFNLKEGKNWWWDVNESPVWQDRIFHVLAVLYGIVSVIAVIQLVRIQLRVPEYG 69

Query: 64  WTTQKVFHFLNCLVNGVRCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYALLVLFWA 123
           WTTQKVFHFLN +VNGVR LVF+F R+ Q + PEILQHILLD+PSLAFFTTYALLVLFWA
Sbjct: 70  WTTQKVFHFLNFMVNGVRALVFLFRRDAQNMQPEILQHILLDIPSLAFFTTYALLVLFWA 129

Query: 124 EIYYQARAVSSDGLKPSFYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFAGISXXXX 183
           EIYYQARAVS+DGL+PSF+TIN VVY IQ         KPV  +VI+SK+FFAG+S    
Sbjct: 130 EIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLVLWWKPVHLMVIISKMFFAGVSLFAA 189

Query: 184 XXXXXXXXXXXXXXQRFPVESKGRRKKLQEV 214
                         QRFPVESKGRRKKLQEV
Sbjct: 190 LGFLLYGGRLFLMLQRFPVESKGRRKKLQEV 220


>AT4G21790.1 | Symbols: TOM1, ATTOM1 | tobamovirus multiplication 1
           | chr4:11569924-11572163 FORWARD LENGTH=291
          Length = 291

 Score =  197 bits (501), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 102/221 (46%), Positives = 139/221 (62%), Gaps = 4/221 (1%)

Query: 1   MGNNSVPVPA----VKLTDSYSWWRDINDSPAWQDTIFHTLAVLYGVVSAVALIQLVRIQ 56
           M ++ + +PA    +  T   SWW D+N+S  WQD IF  L   Y +VSAVAL+QL+RIQ
Sbjct: 1   MTDSGLMMPAEIAGILTTAITSWWDDVNESTQWQDGIFFALCGAYALVSAVALVQLIRIQ 60

Query: 57  LRVPEYGWTTQKVFHFLNCLVNGVRCLVFIFFRNVQRLHPEILQHILLDVPSLAFFTTYA 116
           +RVPEYGWTTQKVFH +N +VNGVR ++F F   V  +HP+ L  +LLD+P L FF+ Y 
Sbjct: 61  MRVPEYGWTTQKVFHLMNFVVNGVRAVLFGFHMQVFLVHPKALCWVLLDLPGLLFFSAYT 120

Query: 117 LLVLFWAEIYYQARAVSSDGLKPSFYTINVVVYAIQXXXXXXXXXKPVSALVILSKLFFA 176
           LLVLFWAEIY+QAR++ +D L+ ++ ++NV VY  Q            S + ++ K+F A
Sbjct: 121 LLVLFWAEIYHQARSLPTDKLRITYISVNVAVYLAQIGIWAYIWVHDNSTVELVGKIFIA 180

Query: 177 GISXXXXXXXXXXXXXXXXXXQRFPVESKGRRKKLQEVCSL 217
            +S                  +RFP+ESKGRRKKL EV S+
Sbjct: 181 VVSFIAALGFLLYGGRLFFMLRRFPIESKGRRKKLHEVGSV 221