Miyakogusa Predicted Gene
- Lj0g3v0262999.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0262999.1 Non Chatacterized Hit- tr|K3ZQP1|K3ZQP1_SETIT
Uncharacterized protein OS=Setaria italica GN=Si028921,22.4,2e-18,no
description,Tetratricopeptide-like helical; PPR_2,Pentatricopeptide
repeat; PPR,Pentatricopeptide,CUFF.17327.1
(610 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 578 e-165
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 137 2e-32
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 129 5e-30
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 5e-29
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 8e-29
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 8e-29
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 124 3e-28
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 9e-28
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 3e-26
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 6e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 115 7e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 114 3e-25
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 6e-25
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 1e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 111 2e-24
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 110 2e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 3e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 110 4e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 8e-24
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 5e-23
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 5e-23
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 8e-23
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 105 8e-23
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 105 1e-22
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 104 2e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 4e-22
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 102 5e-22
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 1e-21
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 98 2e-20
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 3e-20
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 97 4e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 4e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 97 4e-20
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 97 4e-20
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 1e-19
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 95 1e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 95 1e-19
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 95 2e-19
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 94 3e-19
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 7e-19
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 9e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 89 7e-18
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 89 1e-17
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 88 2e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 87 4e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 83 4e-16
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 82 1e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 79 7e-15
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 77 5e-14
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 5e-14
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 76 6e-14
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 76 9e-14
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 75 2e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 74 4e-13
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 74 4e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 73 5e-13
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 73 5e-13
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 7e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 8e-13
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 71 3e-12
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 70 4e-12
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 69 8e-12
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 69 1e-11
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 68 2e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 68 2e-11
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 68 2e-11
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 67 4e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 67 4e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 67 5e-11
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 6e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 66 8e-11
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 66 8e-11
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 64 3e-10
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 5e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 62 8e-10
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 62 2e-09
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 2e-09
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 61 2e-09
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 59 8e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 8e-09
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 58 2e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 58 2e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 57 3e-08
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 57 3e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 57 4e-08
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 57 4e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 56 7e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 56 9e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 9e-08
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G01990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 53 5e-07
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G17033.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 7e-07
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT2G17033.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 8e-07
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 52 8e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 9e-07
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 2e-06
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 51 2e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 3e-06
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 6e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 7e-06
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 49 7e-06
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 49 8e-06
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 578 bits (1489), Expect = e-165, Method: Compositional matrix adjust.
Identities = 287/528 (54%), Positives = 379/528 (71%), Gaps = 6/528 (1%)
Query: 85 PGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFIL 144
PG +LN L +DP+T +L+ ++Y++ K+ R T KH+I YL+ K WD ++
Sbjct: 69 PGPNDLNRVLSRFLRDPETRKLSSEFYEKAKENSELR----TTKHLISYLVSSKSWDLLV 124
Query: 145 SVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYN 204
SV ED + + LPDG TCS LI CIR RKF+I LL+ F+SD +AV A +A++ +N
Sbjct: 125 SVCEDLREHKALPDGQTCSNLIRSCIRDRKFRITHCLLSVFRSDKSLAVSASDAAMKGFN 184
Query: 205 KLHMFRRTVLVFEKLKSNSVVLDSRG-YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSK 263
KL M+ T+ VF++LK + V S G Y IMEA+ K+ + VV+LF EF+S+ L
Sbjct: 185 KLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLA 244
Query: 264 RYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEE 322
+ G IY ++C SL K GR EALE M KGI ESS +YS LI +FA +V E+
Sbjct: 245 KESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEK 304
Query: 323 LLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFS 382
L +EA + +KDPE+ LK+V+MYV E +E TLEVV AM+ A++KV DC+LCA+VNGFS
Sbjct: 305 LFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFS 364
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
K+RGF+ AV+ YE + + E GQVTYA INAYCRL +YNKAE +F+EM +KGFDKCVV
Sbjct: 365 KQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVV 424
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
AYS+++ MYG++ RL +A++L+AKMK+RGCKPN+W+YNSLIDMHGR +LR+ EK+W EM
Sbjct: 425 AYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEM 484
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
KR KV PDKVSYTSMI AY+++ E E C EL+ E+R+N G IDRAMAGIMVGVFSK +I
Sbjct: 485 KRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRI 544
Query: 563 DQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESFHVS 610
D+L++LLQDMK+EGTRLD RLY SA NA +AGL Q +WLQESF +
Sbjct: 545 DELMRLLQDMKVEGTRLDARLYSSALNALRDAGLNSQIRWLQESFDAA 592
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 109/505 (21%), Positives = 226/505 (44%), Gaps = 53/505 (10%)
Query: 125 STLKHVIRYLMRFKKWDFILSVSEDFKI--YHVLPDGATCSKLIEFCIRQRKFKIAETLL 182
ST +I +F+ D ILSV D+ I + + PD ++++ + K+ E
Sbjct: 119 STFLILIESYAQFELQDEILSVV-DWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEI-- 175
Query: 183 NAFKSDSEVAVFAFGSALRNYNKL-------HMFRRTVLVFEKLKSNSVVLDSRGYSHIM 235
S ++++V+ + +N L H R +L+ E + S +V D + ++ +M
Sbjct: 176 ----SHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVM 231
Query: 236 EAYSKLDDCESVVKL-------------------FHEF--ESRNLRDSKRYLGQI----- 269
+ Y + D + +++ H F E R + D+ ++ ++
Sbjct: 232 QGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGR-VEDALNFIQEMSNQDG 290
Query: 270 -------YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYS--TLICSFASLHKVGEV 320
+ L L K G V A+E VM ++G ++ VY+ ++I L +V E
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG-YDPDVYTYNSVISGLCKLGEVKEA 349
Query: 321 EELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNG 380
E+L + +R + Y L+ +E+ +E+ E+ + + C +++ G
Sbjct: 350 VEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQG 409
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
R A+ +E++ S+G EP + TY +I++ C + ++A + ++ME G +
Sbjct: 410 LCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARS 469
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
V+ Y+++I + ++ + R A ++ +M+ G N YN+LID + + + +L +
Sbjct: 470 VITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMD 529
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
+M PDK +Y S++ + + G+ + ++ NG D G ++ K G
Sbjct: 530 QMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG 589
Query: 561 QIDQLVKLLQDMKMEGTRLDQRLYQ 585
+++ KLL+ ++M+G L Y
Sbjct: 590 RVEVASKLLRSIQMKGINLTPHAYN 614
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 185/402 (46%), Gaps = 15/402 (3%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKL---DDCESVVK-LFHEFESRNLRDSKRYLGQIY 270
+ E +KS+ + + + ++E+Y++ D+ SVV + EF L+ + ++
Sbjct: 105 ILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEF---GLKPDTHFYNRML 161
Query: 271 GVLCESLG-KCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAK 328
+L + K +S A M+ GI + S ++ LI + H++ +L +
Sbjct: 162 NLLVDGNSLKLVEISHA-----KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMP 216
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
S + D + + ++ Y+EE L+ L + E M + + + +V+GF K
Sbjct: 217 SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276
Query: 389 AAVRAYEKLISQ-GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A+ +++ +Q G+ P Q T+ +++N C+ A ++ + M Q+G+D V Y+S+
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I + G ++ A++++ +M R C PN YN+LI +E + + +L + + +
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
PD ++ S+I ELF E R G D +++ G++D+ +
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456
Query: 568 LLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESFHV 609
+L+ M++ G Y + + F +A +A+ + + V
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 156/362 (43%), Gaps = 7/362 (1%)
Query: 156 LPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVL 214
PD T + L+ + K A +++ + + V+ + S + KL + V
Sbjct: 292 FPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVE 351
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
V +++ + ++ Y+ ++ K + E +L S+ + + LC
Sbjct: 352 VLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLC 411
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
L + RV A+E F M KG + Y+ LI S S K+ E +L++ +
Sbjct: 412 --LTRNHRV--AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCA 467
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+ Y L+ + + + + E+ + M+ V +++G K R A +
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+++I +G +P + TY S++ +CR KA + + M G + +V Y ++I +
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM-KRRKVAPDKV 512
+GR+ A KL+ ++ +G YN +I R++ + L+ EM ++ + PD V
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 513 SY 514
SY
Sbjct: 648 SY 649
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 189/426 (44%), Gaps = 9/426 (2%)
Query: 181 LLNAFKSDSEVA---VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEA 237
L FK E + AF L + K + R F K K +LD+ + I+
Sbjct: 123 LFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISM 182
Query: 238 YSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKG 297
K S +F+ + D Y L + GR EA+ F+ M + G
Sbjct: 183 LGKEGRVSSAANMFNGLQ----EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 298 IFESSV-YSTLICSFASLHKV-GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKT 355
+ + Y+ ++ F + ++ L+ + KS D Y L+ L ++
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 356 LEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINA 415
+V E MK A A+++ + K A++ +++ G+ P VTY S+I+A
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 416 YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN 475
Y R ++A ++ +M +KG V Y++++ + R+G++ +AM + +M+ GCKPN
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
+ +N+ I M+G ++ K+++E+ ++PD V++ +++ + + G + +F
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 536 EYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
E + G V +R ++ +S+ G +Q + + + M G D Y + A G
Sbjct: 479 EMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGG 538
Query: 596 LQLQAK 601
+ Q++
Sbjct: 539 MWEQSE 544
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 184/416 (44%), Gaps = 5/416 (1%)
Query: 193 VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFH 252
VF + + L + + + +FE++++ + ++ ++ Y ++K+F
Sbjct: 384 VFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFD 443
Query: 253 EFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKG-IFESSVYSTLICSF 311
E L + L G+ G SE F+ M + G + E ++TLI ++
Sbjct: 444 EINVCGLSPDI----VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAY 499
Query: 312 ASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCD 371
+ + + R D Y ++ + E++ +V+ M+D K +
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 372 CMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEE 431
C++++ ++ + E++ S EP V +++ + +AE+ F E
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSE 619
Query: 432 MEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKN 491
++++GF + +SM+ +YGR + A ++ MKERG P++ YNSL+ MH R +
Sbjct: 620 LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 492 LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI 551
+ E++ E+ + + PD +SY ++I AY + + +F+E R +G V D
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 552 MVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESF 607
+G ++ ++ + +++ M G R +Q Y S + + + + +AK E
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 120/252 (47%), Gaps = 5/252 (1%)
Query: 357 EVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ-GYEP--GQVTYASVI 413
E+ E KD +L A + G + F A+RA++ + Q Y+ A +I
Sbjct: 122 ELFEPFKDKPESTSSELL-AFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIII 180
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
+ + + + A +F +++ GF V +Y+S+I + SGR R A+ + KM+E GCK
Sbjct: 181 SMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCK 240
Query: 474 PNVWVYNSLIDMHGREKN-LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
P + YN ++++ G+ ++ L +MK +APD +Y ++I + + +
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
+F E + G D+ ++ V+ K + + +K+L +M + G Y S +A+
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 593 EAGLQLQAKWLQ 604
G+ +A L+
Sbjct: 361 RDGMLDEAMELK 372
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 135/356 (37%), Gaps = 55/356 (15%)
Query: 85 PGTENLNEFL-----CGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKK 139
P E N + CG F E A Y+R+ D V P+ ST V+ L R
Sbjct: 487 PERETFNTLISAYSRCGSF------EQAMTVYRRMLDAGV-TPDLSTYNTVLAALARGGM 539
Query: 140 WDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSA 199
W+ + K+ + DG + +C +LL+A+ + E+ +
Sbjct: 540 WE------QSEKVLAEMEDGRCKPNELTYC----------SLLHAYANGKEIGL------ 577
Query: 200 LRNYNKLHMFRRTVLVFEKLKSNSVVLDSRG--YSHIMEAYSKLDDCESVVKLFHEFESR 257
+H V S V++ R ++ SK D + F E + R
Sbjct: 578 ------MHSLAEEVY--------SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER 623
Query: 258 NLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHK 316
L + + G+ V++A M ++G S + Y++L+ +
Sbjct: 624 GFSPDITTLNSMVSIY----GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSAD 679
Query: 317 VGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCA 376
G+ EE+LRE ++ D Y ++ Y + + M+++ +
Sbjct: 680 FGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNT 739
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
+ ++ F A+ +I G P Q TY S+++ YC+L++ ++A+ E++
Sbjct: 740 FIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 212/455 (46%), Gaps = 21/455 (4%)
Query: 125 STLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIR-QRKFKIAETLLN 183
S V++ R D LS+ + + +P + + +++ IR +R AE N
Sbjct: 135 SVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAE---N 191
Query: 184 AFKS--DSEVA--VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYS 239
FK +S+V+ VF + +R + + +F+K+++ + + Y+ +++ Y
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 240 KLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI- 298
KL + KL + L + Y V+ L + GR+ E M ++G
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLIS----YNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 299 FESSVYSTLI---CSFASLHKVGEVE-ELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
+ Y+TLI C + H+ + E+LR + + I Y L+ + + +
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI----TYTSLIHSMCKAGNMNR 363
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVIN 414
+E ++ M+ + + +V+GFS++ + A R ++ G+ P VTY ++IN
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKP 474
+C + A V E+M++KG VV+YS+++ + RS + A+++ +M E+G KP
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 475 NVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
+ Y+SLI ++ ++ L+ EM R + PD+ +YT++I AY G+ E +L
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 535 NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
NE G + D +++ +K + + +LL
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/459 (21%), Positives = 194/459 (42%), Gaps = 8/459 (1%)
Query: 85 PGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFIL 144
PG + N L + + A + ++ + + V P T +IR D L
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQV-SPNVFTYNILIRGFCFAGNIDVAL 225
Query: 145 SVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNY 203
++ + + LP+ T + LI+ + RK LL + E + ++ +
Sbjct: 226 TLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL 285
Query: 204 NKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSK 263
+ + V ++ LD Y+ +++ Y K + + + E L S
Sbjct: 286 CREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSV 345
Query: 264 RYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEE 322
Y L S+ K G ++ A+E+ M +G+ + Y+TL+ F+ + E
Sbjct: 346 ----ITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 323 LLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFS 382
+LRE Y L+ + +E + V+E MK+ + V++GF
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
+ A+R +++ +G +P +TY+S+I +C + +A ++EEM + G
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
Y+++I Y G L A++L +M E+G P+V Y+ LI+ ++ R+ ++L ++
Sbjct: 522 TYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKL 581
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
+ P V+Y ++I S EF++ L + + G
Sbjct: 582 FYEESVPSDVTYHTLIENCSNI-EFKSVVSLIKGFCMKG 619
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 106/219 (48%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++ GF A+ ++K+ ++G P VTY ++I+ YC+L + + K+ M KG
Sbjct: 211 LIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG 270
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ +++Y+ +I R GR++ ++ +M RG + YN+LI + +E N Q
Sbjct: 271 LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
+ EM R + P ++YTS+I + KAG E ++ R+ G + +V F
Sbjct: 331 VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
S+ G +++ ++L++M G Y + N G
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/342 (21%), Positives = 154/342 (45%), Gaps = 6/342 (1%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
Y +L G + AL F M KG + V Y+TLI + L K+ + +LLR
Sbjct: 208 YNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA 267
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
+ + Y ++ E +++ V+ M + + ++ G+ K F
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFH 327
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A+ + +++ G P +TY S+I++ C+ N+A + ++M +G Y++++
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLV 387
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
+ + G + A +++ +M + G P+V YN+LI+ H + + +MK + ++
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
PD VSY++++ + ++ + + + E G D ++ F + + + L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 569 LQDMKMEGTRLDQRLYQSAWNAF-----IEAGLQLQAKWLQE 605
++M G D+ Y + NA+ +E LQL + +++
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/390 (19%), Positives = 174/390 (44%), Gaps = 5/390 (1%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
VF+++ + V + Y+ ++ + + + + LF + E++ + Y L
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNV----VTYNTLI 247
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ K ++ + + R M KG+ + + Y+ +I ++ EV +L E R
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D Y L+ Y +E + L + M + ++++ K + A+
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+++ +G P + TY ++++ + + N+A +V EM GF VV Y+++I +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
+G++ +A+ ++ MKE+G P+V Y++++ R ++ + ++ EM + + PD ++
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
Y+S+I + + + +L+ E G D ++ + G +++ ++L +M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 574 MEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+G D Y N + +AK L
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/325 (19%), Positives = 134/325 (41%), Gaps = 36/325 (11%)
Query: 213 VLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYG 271
+ V E +K + D YS ++ + + D + +++ E + ++ D+ Y I G
Sbjct: 435 IAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSR 330
CE R EA + + M + G+ Y+ LI ++ + + +L E +
Sbjct: 495 -FCEQ----RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 331 TKIKDPEVY------------------LKLVIMY---VEEDLLEKTLEVVEAMKDADVKV 369
+ D Y L L + Y V D+ TL +E + + K
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL--IENCSNIEFKS 607
Query: 370 CDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
+ +++ GF + + A + +E ++ + ++P Y +I+ +CR KA ++
Sbjct: 608 ----VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLY 663
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK-PNVWVYNSLIDMHGR 488
+EM + GF V +++ + G++ N + V R C+ L++++ R
Sbjct: 664 KEMVKSGFLLHTVTVIALVKALHKEGKV-NELNSVIVHVLRSCELSEAEQAKVLVEINHR 722
Query: 489 EKNLRQLEKLWNEMKRRKVAPDKVS 513
E N+ + + EM + P+ +S
Sbjct: 723 EGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 121/541 (22%), Positives = 225/541 (41%), Gaps = 44/541 (8%)
Query: 107 AFDYYQRL-KDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKL 165
A D ++ + + RP+ P + + R K++D +L + ++ + D T + +
Sbjct: 54 AIDLFESMIQSRPL--PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111
Query: 166 IEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNY--------------NKLHMFR 210
I R++K A ++L A+K E F + + + + M +
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 211 RTVLVFEKLKSNSVVLDSR---------------------GYSHIMEAYSKLDDCESVVK 249
R LV N + L R Y ++ K + +
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 250 LFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLI 308
LF + E RN++ S Y ++ +SL K G +AL F M KGI V YS+LI
Sbjct: 232 LFRKMEERNIKASVVQ----YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 309 CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK 368
+ K + ++LRE R I D + L+ ++V+E L + E+ M +
Sbjct: 288 GGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIA 347
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
++++GF K A + ++ ++S+G EP VTY+ +IN+YC+ + + ++
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR 488
F E+ KG + Y+++++ + +SG+L A +L +M RG P+V Y L+D
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 489 EKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAM 548
L + +++ +M++ ++ Y +I A + + LF G D
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 549 AGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESFH 608
+M+G K G + + L + MK +G D Y A + + + L E
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Query: 609 V 609
V
Sbjct: 588 V 588
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 187/445 (42%), Gaps = 55/445 (12%)
Query: 157 PDGATCSKLIE-FCIRQRKFKIAETLL-------NAFKSDSEVAVFAFGSALRNYNKLHM 208
PD T S LI C++ R ++E L+ F+ D +G L K
Sbjct: 173 PDLVTVSTLINGLCLKGR---VSEALVLIDRMVEYGFQPDE----VTYGPVLNRLCKSGN 225
Query: 209 FRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQ 268
+ +F K++ ++ YS ++++ K + + LF+E E + ++
Sbjct: 226 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREA 327
+ G LC G+ + + R M + I V +S LI F K+ E +EL E
Sbjct: 286 LIGGLCND----GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK----DADV--------------KV 369
+R D Y L+ + +E+ L + ++ + M + D+ +V
Sbjct: 342 ITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV 401
Query: 370 CDCMLC-----------------AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASV 412
D M +V GF + +AA +++++S+G P VTY +
Sbjct: 402 DDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
++ C + NKA ++FE+M++ + Y+ +I + ++ +A L + ++G
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
KP+V YN +I ++ +L + + L+ +MK PD +Y +I A+ + E
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVE 581
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFS 557
L E ++ G D + +++ + S
Sbjct: 582 LIEEMKVCGFSADSSTIKMVIDMLS 606
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 120/560 (21%), Positives = 238/560 (42%), Gaps = 83/560 (14%)
Query: 92 EFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFK 151
EF+ G+ + K A +Y++ + R + ++ + R + +D + + +
Sbjct: 66 EFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMS 125
Query: 152 IYHVLPDGATCSKLIEFCIR-------------QRKFKIAE------TLLNAFKSDS--- 189
+ P TC +++ C++ RKFK TL+ AF + +
Sbjct: 126 VAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSD 185
Query: 190 --------------EVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIM 235
E V F + +R + K + + +++KS+S+ D Y+ +
Sbjct: 186 MMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCI 245
Query: 236 EAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK 295
+++ K+ + K FHE E+ L+ + + GVLC K R+ EA+E F + K
Sbjct: 246 DSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLC----KANRLDEAVEMFEHLEK 301
Query: 296 -KGIFESSVYSTLI--------------------------------CSFASLHKVGEVEE 322
+ + + Y+T+I C L K+G+V+E
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 323 LLREAKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDA----DVKVCDCMLCA 376
L+ + K P + Y L+ M L+ E+ ++M+ A +V+ + M
Sbjct: 362 ALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM--- 418
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
V+ K + A +E++ + P ++T+ S+I+ ++ + + A KV+E+M
Sbjct: 419 -VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ Y+S+I + GR + K+ M + C P++ + N+ +D + +
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
++ E+K R+ PD SY+ +I KAG ELF + G V+D I++ F
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 557 SKVGQIDQLVKLLQDMKMEG 576
K G++++ +LL++MK +G
Sbjct: 598 CKCGKVNKAYQLLEEMKTKG 617
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 114/504 (22%), Positives = 213/504 (42%), Gaps = 52/504 (10%)
Query: 124 KSTLKHVIRY------LMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKI 177
K ++ VI Y L + K D L V E+ K P+ +T + LI+ R K
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 178 AETLLNAF-KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIME 236
A L ++ K+ V + K +FE++ D + +++
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 237 AYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKK 296
K+ + K++ + + R + +Y L ++ GR + + ++ M +
Sbjct: 456 GLGKVGRVDDAYKVYEKMLDSDCRTNS----IVYTSLIKNFFNHGRKEDGHKIYKDMINQ 511
Query: 297 GIFESSVYSTLICSFASLHKVGEVEE---LLREAKSRTKIKDPEVYLKLVIMYVEEDLLE 353
S L + K GE E+ + E K+R + D Y L+ ++
Sbjct: 512 NC--SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 354 KTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVI 413
+T E+ +MK+ + V++GF K + A + E++ ++G+EP VTY SVI
Sbjct: 570 ETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVI 629
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
+ ++ + ++A +FEE + K + VV YSS+I +G+ GR+ A ++ ++ ++G
Sbjct: 630 DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLT 689
Query: 474 PNVWVYNSLID--MHGREKN------------------------------LRQLEK---L 498
PN++ +NSL+D + E N +R+ K
Sbjct: 690 PNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVF 749
Query: 499 WNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSK 558
W EM+++ + P +SYT+MI +KAG LF+ ++ NGGV D A M+ S
Sbjct: 750 WQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSN 809
Query: 559 VGQIDQLVKLLQDMKMEGTRLDQR 582
+ L ++ + G + +
Sbjct: 810 GNRAMDAFSLFEETRRRGLPIHNK 833
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 196/467 (41%), Gaps = 17/467 (3%)
Query: 105 ELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSK 164
+ AF+ ++ +F P T+ ++ L + +K D ++ E+ PD T
Sbjct: 394 DTAFELRDSMQKAGLF-PNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCS 452
Query: 165 LIEFCIRQRK----FKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLK 220
LI+ + + +K+ E +L+ SD + S ++N+ +++ +
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLD---SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 221 SNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKC 280
+ + D + + M+ K + E +F E ++R R Y +L L K
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARS----YSILIHGLIKA 565
Query: 281 GRVSEALEYFRVMTKKG-IFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV- 338
G +E E F M ++G + ++ Y+ +I F KV + +LL E K TK +P V
Sbjct: 566 GFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMK--TKGFEPTVV 623
Query: 339 -YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKL 397
Y ++ + D L++ + E K +++ + ++++GF K A E+L
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 398 ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRL 457
+ +G P T+ S+++A + + N+A F+ M++ V Y +I + +
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 458 RNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSM 517
A +M+++G KP+ Y ++I + N+ + L++ K PD Y +M
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 518 IGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQ 564
I S LF E R G I +++ K ++Q
Sbjct: 804 IEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQ 850
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 125/269 (46%), Gaps = 9/269 (3%)
Query: 314 LHKVGEVEELLREAKSRTKIKD-PEVYLKLVIMYV---EEDLLEKTL-EVVEAMKDADVK 368
L V E R + RT++ PE Y L+++ D L++ L E+ A V
Sbjct: 75 LKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVN 134
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
C M+ V R G+ V+ K + P Y ++I A+ ++ + +
Sbjct: 135 TCIEMVLGCVKANKLREGYDV-VQMMRKF---KFRPAFSAYTTLIGAFSAVNHSDMMLTL 190
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR 488
F++M++ G++ V ++++I + + GR+ +A+ L+ +MK ++ +YN ID G+
Sbjct: 191 FQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 489 EKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAM 548
+ K ++E++ + PD+V+YTSMIG KA + E+F N V
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 549 AGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
M+ + G+ D+ LL+ + +G+
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 82/187 (43%)
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
+Y S++ R ++ +++ EM GF V M++ ++ +LR +V M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
++ +P Y +LI + + L+ +M+ P +T++I ++K G
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
++ L +E + + D + + + F KVG++D K +++ G + D+ Y S
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 588 WNAFIEA 594
+A
Sbjct: 280 IGVLCKA 286
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 160/344 (46%), Gaps = 5/344 (1%)
Query: 250 LFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLI 308
LF E ++ R Y L + K G + +A M K+G+ + YS LI
Sbjct: 326 LFEELRQSGIKPRTR----AYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 309 CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK 368
++ + + +L+E ++ + V+ +L+ + + +KT +V++ MK VK
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
V++ F K A+ +++++S+G EP +VT+ ++I+ +C+ ++ AE++
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR 488
FE ME++G C Y+ MI YG R + +L+ KMK +G PNV + +L+D++G+
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 489 EKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAM 548
+ EMK + P Y ++I AY++ G E F +G
Sbjct: 562 SGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLA 621
Query: 549 AGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
++ F + + + +LQ MK G + D Y + A I
Sbjct: 622 LNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALI 665
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 195/440 (44%), Gaps = 14/440 (3%)
Query: 161 TCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGS----ALRNYNKLH--MFRRTVL 214
T + LI C R + A L+ + D + F S +L NK+ M R
Sbjct: 199 TYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLR--- 255
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
++++++ + + LD + + I+ ++K D ++L ++ L L I L
Sbjct: 256 LYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALA 315
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
+S GR EA F + + GI + Y+ L+ + + + E ++ E + R
Sbjct: 316 DS----GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 371
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D Y L+ YV E V++ M+ DV+ + ++ GF R + +
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+++ S G +P + Y VI+ + + + + A F+ M +G + V ++++I + +
Sbjct: 432 LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCK 491
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
GR A ++ M+ RGC P YN +I+ +G ++ +++L +MK + + P+ V+
Sbjct: 492 HGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT 551
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
+T+++ Y K+G F E E + G M ++ +++ G +Q V + M
Sbjct: 552 HTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMT 611
Query: 574 MEGTRLDQRLYQSAWNAFIE 593
+G + S NAF E
Sbjct: 612 SDGLKPSLLALNSLINAFGE 631
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/391 (20%), Positives = 172/391 (43%), Gaps = 11/391 (2%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESV--VKLFHEFESRNLRDSKRYLGQIYGV 272
+ K++ + D YS ++++ ++ + +SV ++L+ E E RD Q+
Sbjct: 219 LIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIE----RDKLELDVQLVND 274
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVG---EVEELLREAKS 329
+ K G S+AL+ + G+ S+ +TL+ ++L G E E L E +
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGL--SAKTATLVSIISALADSGRTLEAEALFEELRQ 332
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
Y L+ YV+ L+ +V M+ V + +++ + + +
Sbjct: 333 SGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWES 392
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
A +++ + +P ++ ++ + ++ K +V +EM+ G Y+ +I
Sbjct: 393 ARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVID 452
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
+G+ L +AM +M G +P+ +N+LID H + E+++ M+RR P
Sbjct: 453 TFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP 512
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
+Y MI +Y ++ L + + G + + +V V+ K G+ + ++ L
Sbjct: 513 CATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL 572
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
++MK G + +Y + NA+ + GL QA
Sbjct: 573 EEMKSVGLKPSSTMYNALINAYAQRGLSEQA 603
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 152/335 (45%), Gaps = 26/335 (7%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAK 328
+Y +L +LG+ ++ EA ++++K Y+ LI + A + + + L+ + +
Sbjct: 169 LYSILIHALGRSEKLYEAF----LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMR 224
Query: 329 SRTKIKDPEVYLKLVIMYVEED-------LLEKTLEVVEAMKDADVKVCDCMLCAVVNGF 381
D Y LVI + LL E+ + DV++ + ++ GF
Sbjct: 225 QDGYQSDFVNY-SLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVN----DIIMGF 279
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
+K S A++ + G T S+I+A + +AE +FEE+ Q G
Sbjct: 280 AKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRT 339
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMH---GREKNLRQLEKL 498
AY++++ Y ++G L++A +V++M++RG P+ Y+ LID + GR ++ R + K
Sbjct: 340 RAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLK- 398
Query: 499 WNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSK 558
EM+ V P+ ++ ++ + GE++ ++ E + G DR +++ F K
Sbjct: 399 --EMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGK 456
Query: 559 VGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIE 593
+D + M EG D + WN I+
Sbjct: 457 FNCLDHAMTTFDRMLSEGIEPD----RVTWNTLID 487
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 185/400 (46%), Gaps = 13/400 (3%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ L N L++ ++ ++ + D + L + + +R LG + LC
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-------YSTLICSFASLHKVGEVEELLREA 327
+S RV EALE F M K + +V ++TLI + ++ E EELL
Sbjct: 341 KS----RRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 328 KSRTK-IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
K + + + Y L+ Y LE EVV MK+ ++K + +V G + G
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
+ AV + + +G + VTY ++I+A C +S KA +E+M + G Y +
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
+I + R +A+++V K+KE G ++ YN LI + + N ++ ++ +M++
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
PD ++Y ++I + K +FE+ + + R +G G ++ + VG++D+ +
Sbjct: 577 KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 567 KLLQDMKMEG-TRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
KL +DM + + +Y NAF + G QA L+E
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/439 (21%), Positives = 178/439 (40%), Gaps = 24/439 (5%)
Query: 116 DRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYH------VLPDGATCSKLIEFC 169
D RP+ TL +I L + ++ D L V E + + D + LI+
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 170 IRQRKFKIAETLLNAFKSDSEVAVFA--FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLD 227
+ + K AE LL K + A + + Y + V ++K + + +
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI--YGVLCESLGKCGRVSE 285
+ I+ + V F + E ++ G + Y L + V +
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK------GNVVTYMTLIHACCSVSNVEK 494
Query: 286 ALEYFRVMTKKGIF-ESSVYSTLI---CSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
A+ ++ M + G ++ +Y LI C H V E L+E D Y
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL---DLLAYNM 551
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
L+ ++ +++ EK E++ M+ K +++ F K + F + R E++ G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEME-QKGFDKCVVAYSSMIVMYGRSGRLRNA 460
+P TY +VI+AYC + + ++A K+F++M + V Y+ +I + + G A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+ L +MK + +PNV YN+L + L KL +EM + P++++ ++
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMER 731
Query: 521 YSKAGEFETCTELFNEYRI 539
S + E + Y +
Sbjct: 732 LSGSDELVKLRKFMQGYSV 750
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 209/461 (45%), Gaps = 38/461 (8%)
Query: 165 LIEFCIRQRKFKIAETLLNAF-------KSDSEVAVFA--------FGSALRNYN----- 204
+I + + K+A++L+++F +DS V F +GS R ++
Sbjct: 125 VIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQV 184
Query: 205 --KLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDC---ESVVKLFHEFESRNL 259
+ R VFEK+ + +VL + + SK DC + + +F EF +
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK--DCYKTATAIIVFREFPEVGV 242
Query: 260 RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLI---CSFASLH 315
+ Y ++ + + GR+ EA +M KG + YST++ C F L
Sbjct: 243 C----WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 316 KVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
KV ++ E+++ + + +Y ++ + L + E M + +
Sbjct: 299 KVWKLIEVMKRKGLK---PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+++GF KR AA + + ++ S+ P +TY ++I+ +C++ +A K+F EM K
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G + V ++ +I Y ++G +++A ++ M + GC PNV Y +LID +E +L
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
+L +EM + + P+ +Y S++ K+G E +L E+ G D ++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
+ K G++D+ ++L++M +G + + N F G+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 160/361 (44%), Gaps = 40/361 (11%)
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
D YS ++ Y + + + V KL + + L+ + G I G+LC + +++EA
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC----RICKLAEA 335
Query: 287 LEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
E F M ++GI ++ VY+TLI F + + E SR
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD-------------- 381
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
+ D+L T A+++GF + A + + ++ +G EP
Sbjct: 382 -ITPDVLTYT--------------------AIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
VT+ +IN YC+ A +V M Q G VV Y+++I + G L +A +L+
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
+M + G +PN++ YNS+++ + N+ + KL E + + D V+YT+++ AY K+G
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 526 EFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
E + E+ E G +++ F G ++ KLL M +G + +
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 586 S 586
S
Sbjct: 601 S 601
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 172/375 (45%), Gaps = 13/375 (3%)
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLC 274
F ++ ++ D+ Y+ +++ + K D + K F+E SR++ D Y I G C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG-FC 397
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ G + EA + F M KG+ SV ++ LI + K G +++ R +
Sbjct: 398 Q----IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC---KAGHMKDAFRVHNHMIQA 450
Query: 334 K-DPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA 390
P V Y L+ +E L+ E++ M ++ ++VNG K A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
V+ + + G VTY ++++AYC+ + +KA+++ +EM KG +V ++ ++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ G L + KL+ M +G PN +NSL+ + NL+ ++ +M R V PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
+Y +++ + KA + LF E + G + + +++ F K + + ++
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 571 DMKMEGTRLDQRLYQ 585
M+ EG D+ ++
Sbjct: 691 QMRREGLAADKEIFD 705
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAY-CRLSQ--YNKAEK--VFEEMEQKGFDKCVVAY 444
A R +EK+++ G V N Y RLS+ Y A VF E + G V +Y
Sbjct: 194 ARRVFEKMLNYGL----VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 445 SSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
+ +I + GR++ A L+ M+ +G P+V Y+++++ + R L ++ KL MKR
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQ 564
+ + P+ Y S+IG + + E F+E G + D + ++ F K G I
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 565 LVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA-KWLQESF 607
K +M D Y + + F + G ++A K E F
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y+ +++ K D +S +L HE L+ + I LC+S G + EA++
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS----GNIEEAVKLV 514
Query: 291 RVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM--YV 347
G+ +V Y+TL+ ++ ++ + +E+L+E K P + V+M +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG--KGLQPTIVTFNVLMNGFC 572
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
+LE +++ M + ++V + R AA Y+ + S+G P
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
TY +++ +C+ +A +F+EM+ KGF V YS +I + + + A ++ +M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 468 KERGCKPNVWVYNSLID 484
+ G + +++ D
Sbjct: 693 RREGLAADKEIFDFFSD 709
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 209/461 (45%), Gaps = 38/461 (8%)
Query: 165 LIEFCIRQRKFKIAETLLNAF-------KSDSEVAVFA--------FGSALRNYN----- 204
+I + + K+A++L+++F +DS V F +GS R ++
Sbjct: 125 VIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQV 184
Query: 205 --KLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDC---ESVVKLFHEFESRNL 259
+ R VFEK+ + +VL + + SK DC + + +F EF +
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSK--DCYKTATAIIVFREFPEVGV 242
Query: 260 RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLI---CSFASLH 315
+ Y ++ + + GR+ EA +M KG + YST++ C F L
Sbjct: 243 C----WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELD 298
Query: 316 KVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
KV ++ E+++ + + +Y ++ + L + E M + +
Sbjct: 299 KVWKLIEVMKRKGLK---PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+++GF KR AA + + ++ S+ P +TY ++I+ +C++ +A K+F EM K
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G + V ++ +I Y ++G +++A ++ M + GC PNV Y +LID +E +L
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
+L +EM + + P+ +Y S++ K+G E +L E+ G D ++
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
+ K G++D+ ++L++M +G + + N F G+
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 160/361 (44%), Gaps = 40/361 (11%)
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
D YS ++ Y + + + V KL + + L+ + G I G+LC + +++EA
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLC----RICKLAEA 335
Query: 287 LEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
E F M ++GI ++ VY+TLI F + + E SR
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRD-------------- 381
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
+ D+L T A+++GF + A + + ++ +G EP
Sbjct: 382 -ITPDVLTYT--------------------AIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
VT+ +IN YC+ A +V M Q G VV Y+++I + G L +A +L+
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
+M + G +PN++ YNS+++ + N+ + KL E + + D V+YT+++ AY K+G
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 526 EFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
E + E+ E G +++ F G ++ KLL M +G + +
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 586 S 586
S
Sbjct: 601 S 601
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 172/375 (45%), Gaps = 13/375 (3%)
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLC 274
F ++ ++ D+ Y+ +++ + K D + K F+E SR++ D Y I G C
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG-FC 397
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ G + EA + F M KG+ SV ++ LI + K G +++ R +
Sbjct: 398 Q----IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC---KAGHMKDAFRVHNHMIQA 450
Query: 334 K-DPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA 390
P V Y L+ +E L+ E++ M ++ ++VNG K A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
V+ + + G VTY ++++AYC+ + +KA+++ +EM KG +V ++ ++
Sbjct: 511 VKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNG 570
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ G L + KL+ M +G PN +NSL+ + NL+ ++ +M R V PD
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
+Y +++ + KA + LF E + G + + +++ F K + + ++
Sbjct: 631 GKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFD 690
Query: 571 DMKMEGTRLDQRLYQ 585
M+ EG D+ ++
Sbjct: 691 QMRREGLAADKEIFD 705
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAY-CRLSQ--YNKAEK--VFEEMEQKGFDKCVVAY 444
A R +EK+++ G V N Y RLS+ Y A VF E + G V +Y
Sbjct: 194 ARRVFEKMLNYGL----VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASY 249
Query: 445 SSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
+ +I + GR++ A L+ M+ +G P+V Y+++++ + R L ++ KL MKR
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQ 564
+ + P+ Y S+IG + + E F+E G + D + ++ F K G I
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369
Query: 565 LVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA-KWLQESF 607
K +M D Y + + F + G ++A K E F
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 115/257 (44%), Gaps = 9/257 (3%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y+ +++ K D +S +L HE L+ + I LC+S G + EA++
Sbjct: 459 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS----GNIEEAVKLV 514
Query: 291 RVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM--YV 347
G+ +V Y+TL+ ++ ++ + +E+L+E K P + V+M +
Sbjct: 515 GEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLG--KGLQPTIVTFNVLMNGFC 572
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
+LE +++ M + ++V + R AA Y+ + S+G P
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
TY +++ +C+ +A +F+EM+ KGF V YS +I + + + A ++ +M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 468 KERGCKPNVWVYNSLID 484
+ G + +++ D
Sbjct: 693 RREGLAADKEIFDFFSD 709
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 185/400 (46%), Gaps = 13/400 (3%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ L N L++ ++ ++ + D + L + + +R LG + LC
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-------YSTLICSFASLHKVGEVEELLREA 327
+S RV EALE F M K + +V ++TLI + ++ E EELL
Sbjct: 341 KS----RRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 328 KSRTK-IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
K + + + Y L+ Y LE EVV MK+ ++K + +V G + G
Sbjct: 397 KLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
+ AV + + +G + VTY ++I+A C +S KA +E+M + G Y +
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
+I + R +A+++V K+KE G ++ YN LI + + N ++ ++ +M++
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEG 576
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
PD ++Y ++I + K +FE+ + + R +G G ++ + VG++D+ +
Sbjct: 577 KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 567 KLLQDMKMEG-TRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
KL +DM + + +Y NAF + G QA L+E
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 176/417 (42%), Gaps = 40/417 (9%)
Query: 141 DFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLL-----------NAFKSDS 189
D +L + E + PD T LI + R+ A + N K+DS
Sbjct: 315 DLVLKMDE----VKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADS 370
Query: 190 EVAVFAFGSALRNYNKLHMFRRT--VLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESV 247
F + + K+ + +LV KL+ V ++ Y+ +++ Y + E+
Sbjct: 371 ----IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP-NAVTYNCLIDGYCRAGKLETA 425
Query: 248 VKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YST 306
++ + ++ + + I G +C G ++ A+ +F M K+G+ + V Y T
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG----LNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 307 LI---CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK 363
LI CS +++ K E + EA D ++Y L+ + + VVE +K
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSP---DAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS---QGYEPGQVTYASVINAYCRLS 420
+ + ++ F + A + YE L +G +P +TY ++I+ + +
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNN---AEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK 595
Query: 421 QYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK-ERGCKPNVWVY 479
+ E++ E+M + G D V Y ++I Y G L A+KL M PN +Y
Sbjct: 596 DFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIY 655
Query: 480 NSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
N LI+ + N Q L EMK + V P+ +Y ++ ++ + ET +L +E
Sbjct: 656 NILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDE 712
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 164/402 (40%), Gaps = 24/402 (5%)
Query: 116 DRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYH------VLPDGATCSKLIEFC 169
D RP+ TL +I L + ++ D L V E + + D + LI+
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 170 IRQRKFKIAETLLNAFKSDSEVAVFA--FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLD 227
+ + K AE LL K + A + + Y + V ++K + + +
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI--YGVLCESLGKCGRVSE 285
+ I+ + V F + E ++ G + Y L + V +
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK------GNVVTYMTLIHACCSVSNVEK 494
Query: 286 ALEYFRVMTKKGIF-ESSVYSTLI---CSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
A+ ++ M + G ++ +Y LI C H V E L+E D Y
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL---DLLAYNM 551
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
L+ ++ +++ EK E++ M+ K +++ F K + F + R E++ G
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEME-QKGFDKCVVAYSSMIVMYGRSGRLRNA 460
+P TY +VI+AYC + + ++A K+F++M + V Y+ +I + + G A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
+ L +MK + +PNV YN+L + L KL +EM
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEM 713
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/318 (19%), Positives = 132/318 (41%), Gaps = 9/318 (2%)
Query: 156 LPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVL 214
+P+ T + LI+ R K + A+ +++ K D + V + + + H V+
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHE-FESRNLRDSKRYLGQIYGVL 273
F ++ V + Y ++ A + + E + + + E+ D+K Y I G L
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISG-L 521
Query: 274 CESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTK 332
C+ R +A+ + + G + Y+ LI F + +V E+L + + K
Sbjct: 522 CQ----VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGK 577
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
D Y L+ + + E ++E M++ + AV++ + A++
Sbjct: 578 KPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALK 637
Query: 393 AYEKL-ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
++ + + P V Y +INA+ +L + +A + EEM+ K V Y+++
Sbjct: 638 LFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL 697
Query: 452 GRSGRLRNAMKLVAKMKE 469
+ +KL+ +M E
Sbjct: 698 NEKTQGETLLKLMDEMVE 715
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 184/400 (46%), Gaps = 13/400 (3%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ L N L++ ++ ++ + D + L + + +R LG + LC
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLC 340
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-------YSTLICSFASLHKVGEVEELLREA 327
+S RV EALE F M K + +V ++TLI + ++ E EELL
Sbjct: 341 KS----RRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM 396
Query: 328 KSRTKIKDPEV-YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
K + V Y L+ Y LE EVV MK+ ++K + +V G + G
Sbjct: 397 KLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHG 456
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
+ AV + + +G + VTY ++I+A C +S KA +E+M + G Y +
Sbjct: 457 LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYA 516
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
+I + R +A+++V K+KE G ++ YN LI + + N ++ ++ +M++
Sbjct: 517 LISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEG 576
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
PD ++Y ++I + K +FE+ + + R +G G ++ + VG++D+ +
Sbjct: 577 KKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEAL 636
Query: 567 KLLQDMKMEG-TRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
KL +DM + + +Y NAF + G QA L+E
Sbjct: 637 KLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 94/439 (21%), Positives = 179/439 (40%), Gaps = 24/439 (5%)
Query: 116 DRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYH------VLPDGATCSKLIEFC 169
D RP+ TL +I L + ++ D L V E + + D + LI+
Sbjct: 321 DEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGL 380
Query: 170 IRQRKFKIAETLLNAFKSDSEVAVFA--FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLD 227
+ + K AE LL K + A A + + Y + V ++K + + +
Sbjct: 381 CKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPN 440
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI--YGVLCESLGKCGRVSE 285
+ I+ + V F + E ++ G + Y L + V +
Sbjct: 441 VVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVK------GNVVTYMTLIHACCSVSNVEK 494
Query: 286 ALEYFRVMTKKGIF-ESSVYSTLI---CSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
A+ ++ M + G ++ +Y LI C H V E L+E D Y
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSL---DLLAYNM 551
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
L+ ++ +++ EK E++ M+ K +++ F K + F + R E++ G
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEME-QKGFDKCVVAYSSMIVMYGRSGRLRNA 460
+P TY +VI+AYC + + ++A K+F++M + V Y+ +I + + G A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+ L +MK + +PNV YN+L + L KL +EM + P++++ ++
Sbjct: 672 LSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMER 731
Query: 521 YSKAGEFETCTELFNEYRI 539
S + E + Y +
Sbjct: 732 LSGSDELVKLRKFMQGYSV 750
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 202/474 (42%), Gaps = 39/474 (8%)
Query: 125 STLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNA 184
+ L +++ L R K LSV K P +T + +I +++ + + +
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 185 F--KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLD 242
+ D + + + +Y KL + +F+++K N + + Y+ ++ Y K+
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 243 DCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS 302
E + LF E + + Y L + LGK GRV EA +++ M + G+
Sbjct: 283 KVEKALDLFEEMKRAGCSPTV----YTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDV 338
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
V+ + + L KVG VEEL ++ E + T VV
Sbjct: 339 VFLNNLMNI--LGKVGRVEELTN-------------------VFSEMGMWRCTPTVVSY- 376
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
+ ++ A+ F + S ++K+ + P + TY+ +I+ YC+ ++
Sbjct: 377 --------NTVIKAL---FESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRV 425
Query: 423 NKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL 482
KA + EEM++KGF C AY S+I G++ R A +L ++KE + VY +
Sbjct: 426 EKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVM 485
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG 542
I G+ L + L+NEMK + PD +Y +++ KAG L + NG
Sbjct: 486 IKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Query: 543 VIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
D I++ F++ G + +++ + +K G + D Y + F AG+
Sbjct: 546 RADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGM 599
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 162/374 (43%), Gaps = 5/374 (1%)
Query: 232 SHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFR 291
S +++A + + +F++ + R + + + +L + G+ +V E Y
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQE-GQHEKVHEV--YTE 222
Query: 292 VMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEED 350
+ + F ++ YS LI S+ L + L E K ++Y L+ +Y +
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 351 LLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYA 410
+EK L++ E MK A ++ G K A Y+ ++ G P V
Sbjct: 283 KVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 411 SVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI-VMYGRSGRLRNAMKLVAKMKE 469
+++N ++ + + VF EM VV+Y+++I ++ + KMK
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFET 529
P+ + Y+ LID + + + + L EM + P +Y S+I A KA +E
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 530 CTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWN 589
ELF E + N G + + +M+ F K G++ + V L +MK +G+ D Y + +
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 590 AFIEAGLQLQAKWL 603
++AG+ +A L
Sbjct: 523 GMVKAGMINEANSL 536
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 178/401 (44%), Gaps = 8/401 (1%)
Query: 196 FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFE 255
+ + + + +K + + + E++ V D+ ++ ++ K D K+ +
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 256 SRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLH 315
R YG L L K GRV A + F + K E +++TLI F +
Sbjct: 315 IRGFAPDD----ITYGYLMNGLCKIGRVDAAKDLFYRIPKP---EIVIFNTLIHGFVTHG 367
Query: 316 KVGEVEELLRE-AKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCML 374
++ + + +L + S + D Y L+ Y +E L+ LEV+ M++ K
Sbjct: 368 RLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 375 CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQ 434
+V+GF K A ++ + G +P V + +I+A+C+ + +A ++F EM +
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 435 KGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQ 494
KG V ++S+I +++A+ L+ M G N YN+LI+ R +++
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 495 LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
KL NEM + D+++Y S+I +AGE + LF + +G I++
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 555 VFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ G +++ V+ ++M + G+ D + S N AG
Sbjct: 608 GLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 190/469 (40%), Gaps = 43/469 (9%)
Query: 174 KFKIAETLLNAFKSDSEVAVFA---FGSALRNYNKLHMFRRTV-LVFEKLKSNSVVLDSR 229
+FK + LL K E VF F S +R+Y+K +T L+ E S +
Sbjct: 126 EFKTIDRLLIQMKD--EGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFK 183
Query: 230 GYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEY 289
Y+ ++E + + +F++ SR + + G + C + AL
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC----AVNEIDSALSL 239
Query: 290 FRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
R MTK G +SV Y TLI S + ++V E +LL E + D E + +++ +
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA-----------VRAYEKL 397
D + + ++V M D ++NG K AA + + L
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTL 359
Query: 398 I---------------------SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
I S G P TY S+I Y + A +V +M KG
Sbjct: 360 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 419
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
V +Y+ ++ + + G++ A ++ +M G KPN +N LI +E + +
Sbjct: 420 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
+++ EM R+ PD ++ S+I + E + L + G V + ++ F
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
+ G+I + KL+ +M +G+ LD+ Y S AG +A+ L E
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/405 (20%), Positives = 171/405 (42%), Gaps = 7/405 (1%)
Query: 122 PEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETL 181
P+ T VI L +F + + + I PD T L+ + + A+ L
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDL 344
Query: 182 LNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKL 241
V + +L + ++ + + S +V D Y+ ++ Y K
Sbjct: 345 FYRIPKPEIVIFNTLIHGFVTHGRLDDAK--AVLSDMVTSYGIVPDVCTYNSLIYGYWKE 402
Query: 242 DDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES 301
+++ H+ ++ + + Y +L + K G++ EA M+ G+ +
Sbjct: 403 GLVGLALEVLHDMRNKGCKPNVYS----YTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458
Query: 302 SV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVE 360
+V ++ LI +F H++ E E+ RE + D + L+ E D ++ L ++
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518
Query: 361 AMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLS 420
M V ++N F +R A + +++ QG ++TY S+I CR
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578
Query: 421 QYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYN 480
+ +KA +FE+M + G ++ + +I RSG + A++ +M RG P++ +N
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638
Query: 481 SLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
SLI+ R + ++ +++ + PD V++ +++ K G
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGG 683
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/479 (22%), Positives = 190/479 (39%), Gaps = 21/479 (4%)
Query: 122 PEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLI-EFC----IRQRKFK 176
P + +I L + + + L + E+ + +PD T + +I C I +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 177 IAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIME 236
+ L+ F D +G + K+ +F ++ +V+ + H
Sbjct: 310 VNRMLIRGFAPDD----ITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT-LIHGFV 364
Query: 237 AYSKLDDCESVVKLFHEFESRNL-RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK 295
+ +LDD ++V L S + D Y IYG E G V ALE M
Sbjct: 365 THGRLDDAKAV--LSDMVTSYGIVPDVCTYNSLIYGYWKE-----GLVGLALEVLHDMRN 417
Query: 296 KGIFESSVYS--TLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLE 353
KG + +VYS L+ F L K+ E +L E + + + L+ + +E +
Sbjct: 418 KGC-KPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 354 KTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVI 413
+ +E+ M K ++++G + A+ +IS+G VTY ++I
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
NA+ R + +A K+ EM +G + Y+S+I R+G + A L KM G
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 474 PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTEL 533
P+ N LI+ R + + + EM R PD V++ S+I +AG E +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 534 FNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
F + + G D ++ K G + LL + +G + R + + I
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 154/358 (43%), Gaps = 22/358 (6%)
Query: 249 KLFHEFESRNLRDSKRYLG--QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS--VY 304
KL F+ +LR+S + Q+Y +L L VS ++E F + + S VY
Sbjct: 59 KLLKPFDLDSLRNSFHKITPFQLYKLLELPL----NVSTSMELFSWTGSQNGYRHSFDVY 114
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD 364
LI + + ++ LL + K + +++ ++ Y + +T ++ M++
Sbjct: 115 QVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRN 174
Query: 365 A-----DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRL 419
K + +L +V+G + A + ++S+ P T+ V+ A+C +
Sbjct: 175 VYSCEPTFKSYNVVLEILVSGNCHK----VAANVFYDMLSRKIPPTLFTFGVVMKAFCAV 230
Query: 420 SQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVY 479
++ + A + +M + G V Y ++I + R+ A++L+ +M GC P+ +
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 480 NSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI 539
N +I + + + K+ N M R APD ++Y ++ K G + +LF YRI
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--YRI 348
Query: 540 NGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME-GTRLDQRLYQSAWNAFIEAGL 596
I + ++ F G++D +L DM G D Y S + + GL
Sbjct: 349 PKPEI--VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 166/382 (43%), Gaps = 21/382 (5%)
Query: 209 FRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQ 268
+ + V ++ + D+ YS ++ E LF E + L
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADV----Y 519
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREA 327
Y ++ +S K G + +A ++F M + G + V Y+ LI ++ KV EL
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM-KDADVKVCDCML------------ 374
S + + Y L+ + + +EK ++ E M DV D
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNV 639
Query: 375 ---CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEE 431
A+++GF K A + + + +G EP Q+ Y ++I+ C++ + ++A++V E
Sbjct: 640 VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 432 MEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKN 491
M + GF + YSS+I Y + R A K+++KM E C PNV +Y +ID +
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 492 LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI 551
+ KL M+ + P+ V+YT+MI + G+ ETC EL G + +
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 552 MVGVFSKVGQIDQLVKLLQDMK 573
++ K G +D LL++MK
Sbjct: 820 LIDHCCKNGALDVAHNLLEEMK 841
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/494 (22%), Positives = 201/494 (40%), Gaps = 63/494 (12%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIE-FCIRQRKFKIA 178
F P+ ST V+ YL K + + E+ K ++ D T + +++ FC K +
Sbjct: 479 FIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC----KAGLI 534
Query: 179 ETLLNAFKSDSEVA----VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHI 234
E F EV V + + + Y K +FE + S + + YS +
Sbjct: 535 EQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSAL 594
Query: 235 MEAYSKLDDCESVVKLFHEF-ESRNLRDSKRYLGQ-----------IYGVLCESLGKCGR 282
++ + K E ++F S+++ D Y Q YG L + K R
Sbjct: 595 IDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR 654
Query: 283 VSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
V EA + M+ +G + VY LI + K+ E +E+ E
Sbjct: 655 VEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE--------------- 699
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
+ E TL ++ D KV KR+ ++ V + K++
Sbjct: 700 -----MSEHGFPATLYTYSSLIDRYFKV-------------KRQDLASKVLS--KMLENS 739
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
P V Y +I+ C++ + ++A K+ + ME+KG VV Y++MI +G G++ +
Sbjct: 740 CAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
+L+ +M +G PN Y LID + L L EMK+ Y +I +
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF 859
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM-KMEGTRLD 580
+K EF L +E + ++ +++ K +++ ++LL+++ T +D
Sbjct: 860 NK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVD 917
Query: 581 QRLYQSAWNAFIEA 594
Y S +N+ IE+
Sbjct: 918 ---YSSTYNSLIES 928
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/438 (21%), Positives = 173/438 (39%), Gaps = 13/438 (2%)
Query: 165 LIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSAL-RNYNKLHMFRRTVLVFEKLKSNS 223
L++ +R K+ E L + D + F + L R + + F + +LK
Sbjct: 171 LVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFR 230
Query: 224 VVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRV 283
Y+ +++A+ K D +S + E NLR G SL K G+
Sbjct: 231 FRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD----GFTLRCFAYSLCKVGKW 286
Query: 284 SEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
EAL V T+ + ++ Y+ LI E + L ++ + + + Y L+
Sbjct: 287 REALTL--VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
+ + L + V+ M + ++V+ + S A + +K++ G+
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404
Query: 404 PGQVTYASVINAYC------RLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRL 457
PG V Y +I + C + AEK + EM G + SS +G+
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 458 RNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSM 517
A ++ +M +G P+ Y+ +++ + L+ EMKR + D +YT M
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524
Query: 518 IGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
+ ++ KAG E + FNE R G + ++ + K ++ +L + M EG
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584
Query: 578 RLDQRLYQSAWNAFIEAG 595
+ Y + + +AG
Sbjct: 585 LPNIVTYSALIDGHCKAG 602
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 153/422 (36%), Gaps = 84/422 (19%)
Query: 230 GYSHIMEAYSKL------DDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRV 283
GY H Y+ L DD E V + EF + D K G+ VL + G
Sbjct: 160 GYKHTAPVYNALVDLIVRDDDEKVPE---EFLQQIRDDDKEVFGEFLNVLVRKHCRNGSF 216
Query: 284 SEALEY------FRVMTKKGIFESSVYS---------------------------TLICS 310
S ALE FR + + + + TL C
Sbjct: 217 SIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCF 276
Query: 311 FASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVC 370
SL KVG+ E L ++ + D Y KL+ E L E+ ++ + M+
Sbjct: 277 AYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMR-----AT 331
Query: 371 DCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFE 430
C+ P VTY++++ Q + ++V
Sbjct: 332 SCL------------------------------PNVVTYSTLLCGCLNKKQLGRCKRVLN 361
Query: 431 EMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREK 490
M +G ++S++ Y SG A KL+ KM + G P VYN LI +K
Sbjct: 362 MMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
Query: 491 N------LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVI 544
+ L EK ++EM V +K++ +S AG++E + E G +
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIP 481
Query: 545 DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA-KWL 603
D + ++ +++ L ++MK G D Y ++F +AGL QA KW
Sbjct: 482 DTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWF 541
Query: 604 QE 605
E
Sbjct: 542 NE 543
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 201/455 (44%), Gaps = 48/455 (10%)
Query: 105 ELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSK 164
+L + ++R+ D V + +L V+ L R + + + ++F + + P+ T +
Sbjct: 206 DLCLEIFRRMVDSGV-KITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 165 LIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSV 224
+I ++QR F E +L K D V YNK+
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVV-----------YNKVT----------------- 296
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVS 284
Y+ +ME K KLF E R + +Y L + G +
Sbjct: 297 ------YTLLMELSVKNGKMSDAEKLFDEMRERGIESDV----HVYTSLISWNCRKGNMK 346
Query: 285 EALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
A F +T+KG+ SS Y LI + ++G E L+ E +S+ V+ L+
Sbjct: 347 RAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLI 406
Query: 344 IMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
Y + ++++ + + M+ ADV C+ + + F++ + + A + +++
Sbjct: 407 DGYCRKGMVDEASMIYDVMEQKGFQADVFTCN----TIASCFNRLKRYDEAKQWLFRMME 462
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
G + V+Y ++I+ YC+ +A+++F EM KG + Y+ MI Y + G+++
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
A KL A M+ G P+ + Y SLI N+ + +L++EM + + + V+YT MI
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
SKAG+ + L++E + G ID + ++G
Sbjct: 583 GLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIG 617
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 173/408 (42%), Gaps = 40/408 (9%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+F ++ + V + + ++E + + E KL EF + ++ Y +
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPE----AYTYNTII 266
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLH-KVGEVEELLREAKSRTKI 333
+ K S +VM K G+ + V TL+ + + K+ + E+L E + R
Sbjct: 267 NAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIE 326
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D VY L+ + +++ + + + + + A+++G K AA
Sbjct: 327 SDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEIL 386
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV------------ 441
++ S+G QV + ++I+ YCR ++A +++ MEQKGF V
Sbjct: 387 MNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNR 446
Query: 442 -----------------------VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
V+Y+++I +Y + G + A +L +M +G +PN
Sbjct: 447 LKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAIT 506
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYR 538
YN +I + ++ +++ KL M+ + PD +YTS+I A + LF+E
Sbjct: 507 YNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMG 566
Query: 539 INGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
+ G + +M+ SK G+ D+ L +MK +G +D ++Y +
Sbjct: 567 LKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTA 614
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 117/225 (52%)
Query: 356 LEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINA 415
LE+ M D+ VK+ L VV G +R + + ++ +G +P TY ++INA
Sbjct: 209 LEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268
Query: 416 YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN 475
Y + ++ E V + M++ G V Y+ ++ + ++G++ +A KL +M+ERG + +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
V VY SLI + R+ N+++ L++E+ + ++P +Y ++I K GE L N
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
Query: 536 EYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
E + G I + + ++ + + G +D+ + M+ +G + D
Sbjct: 389 EMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 190/454 (41%), Gaps = 28/454 (6%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS--EVAVFAFGSAL-------------- 200
PD L R+F +LLN+ +D + V GSA+
Sbjct: 95 PDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMVDCDISEEKFEFFE 154
Query: 201 -------RNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHE 253
R Y MF + VF+ + + +D R + A K + +++F
Sbjct: 155 KFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRR 214
Query: 254 FESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFA 312
++ + L ++ E L + G V ++ + + + KGI E+ Y+T+I ++
Sbjct: 215 MVDSGVKITVYSLT----IVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYV 270
Query: 313 SLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDC 372
VE +L+ K + + Y L+ + V+ + ++ + M++ ++
Sbjct: 271 KQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVH 330
Query: 373 MLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
+ ++++ ++ A +++L +G P TY ++I+ C++ + AE + EM
Sbjct: 331 VYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM 390
Query: 433 EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL 492
+ KG + V ++++I Y R G + A + M+++G + +V+ N++ R K
Sbjct: 391 QSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRY 450
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
+ ++ M V VSYT++I Y K G E LF E G + +M
Sbjct: 451 DEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
+ + K G+I + KL +M+ G D Y S
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTS 544
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/407 (21%), Positives = 176/407 (43%), Gaps = 49/407 (12%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
+PE T +I ++ + + + V + K V+ + T + L+E ++ K AE
Sbjct: 255 IKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAE 314
Query: 180 TLLNAFKS---DSEVAVFAFGSALRNYN-KLHMFRRTVLVFEKLKSNSVVLDSRGYSHIM 235
L + + +S+V V+ ++L ++N + +R L+F++L + S Y ++
Sbjct: 315 KLFDEMRERGIESDVHVY---TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALI 371
Query: 236 EAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK 295
+ K+ + + L +E +S+ + ++ ++ L + + G V EA + VM +
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQ----VVFNTLIDGYCRKGMVDEASMIYDVMEQ 427
Query: 296 KGIFESSVYS--TLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLE 353
KG F++ V++ T+ F L + E ++ L
Sbjct: 428 KG-FQADVFTCNTIASCFNRLKRYDEAKQWLFR--------------------------- 459
Query: 354 KTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVI 413
M + VK+ +++ + K A R + ++ S+G +P +TY +I
Sbjct: 460 --------MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMI 511
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
AYC+ + +A K+ ME G D Y+S+I + + AM+L ++M +G
Sbjct: 512 YAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 474 PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
N Y +I + + L++EMKR+ D YT++IG+
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 8/263 (3%)
Query: 345 MYVEEDLLEKTLEVVEAMK----DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
+YV+ + E+ L V + M D + C L A KRR + + +++
Sbjct: 163 VYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAA----KKRRRIDLCLEIFRRMVDS 218
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G + + V+ CR + K++K+ +E KG Y+++I Y +
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
++ MK+ G N Y L+++ + + EKL++EM+ R + D YTS+I
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
+ G + LF+E G G ++ KVG++ L+ +M+ +G +
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 581 QRLYQSAWNAFIEAGLQLQAKWL 603
Q ++ + + + G+ +A +
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMI 421
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 205/484 (42%), Gaps = 44/484 (9%)
Query: 102 KTEELAFDYYQRLKDRPVFR---PEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPD 158
+T L D +LK+ + + P K T +I L + K+ + S+ + V D
Sbjct: 252 RTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLD 311
Query: 159 GATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVLVFE 217
T S LI+ ++ R A+ L++ S + + + + +K + + +F+
Sbjct: 312 NHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFD 371
Query: 218 KLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESL 277
+ ++ ++ ++ Y+ ++E Y + + +L E + RN+ S G + +C S
Sbjct: 372 GMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS- 430
Query: 278 GKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
G + A + M G + V Y+TLI +F + G+ +L+E K + D
Sbjct: 431 ---GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDI 487
Query: 337 EVYLKLVIM-----------------------------------YVEEDLLEKTLEVVEA 361
Y L+I Y+E + V+
Sbjct: 488 FCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKE 547
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
M++ V + ++N + K+ A AY ++ QG TY ++N + +
Sbjct: 548 MRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDK 607
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
+ AE++F EM KG V +Y +I + + G ++ A + +M E G PNV +YN
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
L+ R + + ++L +EM + + P+ V+Y ++I Y K+G+ LF+E ++ G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 542 GVID 545
V D
Sbjct: 728 LVPD 731
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/524 (21%), Positives = 202/524 (38%), Gaps = 53/524 (10%)
Query: 122 PEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETL 181
P S K ++ L+R+ + D V + +V+ D T LI R ++ + +
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 182 LNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKL 241
L FK++ E F +A N + + E + +V Y +++ K+
Sbjct: 244 L--FKTEKE-----FRTATLNVDGALKLK------ESMICKGLVPLKYTYDVLIDGLCKI 290
Query: 242 DDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FE 300
E L E +S + Y +L + L K A M GI +
Sbjct: 291 KRLEDAKSLLVEMDSLGVSLDN----HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 301 SSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVE 360
+Y IC + + + + L + I + Y L+ Y E + + E++
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 361 AMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLS 420
MK ++ + VV G A +++I+ G P V Y ++I + + S
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 421 QYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYN 480
++ A +V +EM+++G + Y+S+I+ ++ R+ A + +M E G KPN + Y
Sbjct: 467 RFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYG 526
Query: 481 SLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE-FETCT-------- 531
+ I + +K EM+ V P+KV T +I Y K G+ E C+
Sbjct: 527 AFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQ 586
Query: 532 --------------------------ELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
E+F E R G D G+++ FSK+G + +
Sbjct: 587 GILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKA 646
Query: 566 VKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESFHV 609
+ +M EG + +Y F +G +AK L + V
Sbjct: 647 SSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 195/463 (42%), Gaps = 21/463 (4%)
Query: 121 RPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAET 180
RP +I+ ++ ++ + V ++ K + PD + LI + ++ A +
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 181 LL-----NAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIM 235
L N K ++ F +G+ + Y + F ++++ V+ + + ++
Sbjct: 509 FLVEMVENGLKPNA----FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564
Query: 236 EAYSKLDDCESVVKLFHEFESRN-LRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMT 294
Y K + + L D+K Y VL L K +V +A E FR M
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYT-----VLMNGLFKNDKVDDAEEIFREMR 619
Query: 295 KKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLE 353
KGI Y LI F+ L + + + E + +Y L+ + +E
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 354 KTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVI 413
K E+++ M + C +++G+ K + A R ++++ +G P Y +++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE---- 469
+ CRL+ +A +F +KG ++++I + G+ +++ ++ +
Sbjct: 740 DGCCRLNDVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFET 529
R KPN YN +ID +E NL ++L+++M+ + P ++YTS++ Y K G
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 530 CTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
+F+E G D M +++ F K G + + L+ M
Sbjct: 859 MFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 182/464 (39%), Gaps = 63/464 (13%)
Query: 177 IAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIME 236
I TL+ F +S FG A+R V +++K + D Y+ ++
Sbjct: 454 IYTTLIKTFLQNSR-----FGDAMR-------------VLKEMKEQGIAPDIFCYNSLII 495
Query: 237 AYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKK 296
SK + E L+ + YG + + A +Y + M +
Sbjct: 496 GLSKAKRMDEARSFLVEMVENGLKPN----AFTYGAFISGYIEASEFASADKYVKEMREC 551
Query: 297 GIFESSVYST-LICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKT 355
G+ + V T LI + KV E R + + D + Y L+ + D ++
Sbjct: 552 GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDA 611
Query: 356 LEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINA 415
E+ M+ + ++NGFSK A +++++ +G P + Y ++
Sbjct: 612 EEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGG 671
Query: 416 YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN 475
+CR + KA+++ +EM KG V Y ++I Y +SG L A +L +MK +G P+
Sbjct: 672 FCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Query: 476 VWVYNSLIDMHGREKNLRQ--------------------------------------LEK 497
+VY +L+D R ++ + L +
Sbjct: 732 SFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 498 LWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI-MVGVF 556
L + R P+ V+Y MI K G E ELF++ + N ++ + ++ +
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ-NANLMPTVITYTSLLNGY 850
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
K+G+ ++ + + G D +Y NAF++ G+ +A
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 166/393 (42%), Gaps = 30/393 (7%)
Query: 155 VLPDGATCSKLI-EFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKL--HMFRR 211
VLP+ C+ LI E+C +K K+ E +A++S + + G A + Y L +F+
Sbjct: 553 VLPNKVLCTGLINEYC---KKGKVIEAC-SAYRSMVDQGIL--GDA-KTYTVLMNGLFKN 605
Query: 212 TVL-----VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYL 266
+ +F +++ + D Y ++ +SKL + + +F E L +
Sbjct: 606 DKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 267 GQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLR 325
+ G C S G + +A E M+ KG+ ++V Y T+I + + E L
Sbjct: 666 NMLLGGFCRS----GEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 326 EAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRR 385
E K + + D VY LV + +E+ + + K A++N K
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG-CASSTAPFNALINWVFKFG 780
Query: 386 GFSAAVRAYEKLISQGYE----PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
+L+ ++ P VTY +I+ C+ A+++F +M+ V
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
+ Y+S++ Y + GR + + G +P+ +Y+ +I+ +E + L ++
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900
Query: 502 MKRRKVAPD--KVSYTS---MIGAYSKAGEFET 529
M + D K+S ++ ++ ++K GE E
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEV 933
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 145/315 (46%), Gaps = 1/315 (0%)
Query: 282 RVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
+ ++AL F M + S V +S L+ + A L+K V L R + D +
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
L+ + L L + M + ++VNGF F A+ ++++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
GYEP V Y ++I++ C Q N A V + M++ G VV Y+S+I SG +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
++++ M G P+V +++LID++G+E L + +K +NEM +R V P+ V+Y S+I
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
G + ++ N G + ++ + K ++D +K+L M +G D
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 581 QRLYQSAWNAFIEAG 595
Y + + + +AG
Sbjct: 359 TFTYNTLYQGYCQAG 373
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 155/349 (44%), Gaps = 7/349 (2%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
+S ++ A +KL+ E+V+ LF E + + C +C R+S AL
Sbjct: 82 FSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFC----RCARLSLALSCL 137
Query: 291 RVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
M K G FE S+ + +L+ F +++ E L+ + + +Y ++ E
Sbjct: 138 GKMMKLG-FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
+ + L+V++ MK ++ +++ + + R ++ G P +T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
++++I+ Y + Q +A+K + EM Q+ + +V Y+S+I G L A K++ +
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
+G PN YN+LI+ + + K + K+ M R V D +Y ++ Y +AG+F
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 529 TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
++ G D I++ G+I + + L+D++ T
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKT 425
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 143/351 (40%), Gaps = 47/351 (13%)
Query: 230 GYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEY 289
G+ H+ Y + + +V L +E IY + +SL + G+V+ AL+
Sbjct: 158 GFCHVNRFYEAMSLVDQIVGLGYEPNV-----------VIYNTIIDSLCEKGQVNTALDV 206
Query: 290 FRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
+ M K GI V Y++LI G +L + D + L+ +Y +
Sbjct: 207 LKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGK 266
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
E L + + M V +++NG A + L+S+G+ P VT
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y ++IN YC+ + + K+ M + G D Y+++ Y ++G+ A K++ +M
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386
Query: 469 ERGCKPNVWVYNSLIDM---HGR-EKNLRQLEKL-------------------------- 498
G P+++ +N L+D HG+ K L +LE L
Sbjct: 387 SCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVE 446
Query: 499 -----WNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVI 544
+ + + V+PD ++Y +M+ + + EL+ + + G++
Sbjct: 447 DAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLM 497
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 97/221 (43%)
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+K + A + + L G ++ ++I+ +CR ++ + A +M + GF+
Sbjct: 89 IAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPS 148
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
+V + S++ + R AM LV ++ G +PNV +YN++ID + + +
Sbjct: 149 IVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLK 208
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
MK+ + PD V+Y S+I +G + + ++ G D ++ V+ K G
Sbjct: 209 HMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEG 268
Query: 561 QIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
Q+ + K +M + Y S N GL +AK
Sbjct: 269 QLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAK 309
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 107/509 (21%), Positives = 229/509 (44%), Gaps = 24/509 (4%)
Query: 89 NLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILS--- 145
+++E L + Q +EL F KDR + +++ ++ L R W L+
Sbjct: 91 DMDELLASIHQTQNEKEL-FSLLSTYKDRQL------SIRFMVSLLSRENDWQRSLALLD 143
Query: 146 -VSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVA-VFAFGSALRNY 203
V E+ K P + ++ +R ++F IA L + + + + + + + ++
Sbjct: 144 WVHEEAK---YTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSF 200
Query: 204 NKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSK 263
K MF + +K++ + V D YS+++E +L D + +F SR R
Sbjct: 201 GKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIF----SRLKRSGI 256
Query: 264 RYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEE 322
Y + GK EA + M + G+ ++V YSTL+ + HK E
Sbjct: 257 TPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALS 316
Query: 323 LLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFS 382
+ E K D ++ +Y + D++++ + +++ D++ ++ +
Sbjct: 317 VFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYG 376
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
+ F A+ + + + E VTY ++I Y + ++ KA + +EM+ +G + +
Sbjct: 377 EAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
YS++I ++G++G+L A L K++ G + + +Y ++I + R + ++L +E+
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHEL 496
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
K PD + + I +KAG E T +F + +G V D ++ G M+ ++S+ +
Sbjct: 497 K----LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRY 552
Query: 563 DQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
++++ + M+ G D + NA+
Sbjct: 553 VNVIEVFEKMRTAGYFPDSNVIAMVLNAY 581
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 180/419 (42%), Gaps = 56/419 (13%)
Query: 192 AVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLF 251
+VFA+ LRN + F +F++++ ++ D YS ++ ++ K +S +
Sbjct: 154 SVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWL 213
Query: 252 HEFESRNLRDSKRYLGQI--YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLI 308
+ E R G + Y L E + S+A+ F + + GI V Y+++I
Sbjct: 214 QKMEQ------DRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI 267
Query: 309 CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA--- 365
+ E L++E + + Y L+ +YVE + L V MK+
Sbjct: 268 NVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCA 327
Query: 366 -DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNK 424
D+ C+ M I+ Y +L +
Sbjct: 328 LDLTTCNIM---------------------------------------IDVYGQLDMVKE 348
Query: 425 AEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
A+++F + + + VV+Y++++ +YG + A+ L M+ + + NV YN++I
Sbjct: 349 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408
Query: 485 MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVI 544
++G+ + L EM+ R + P+ ++Y+++I + KAG+ + LF + R +G I
Sbjct: 409 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 468
Query: 545 DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
D+ + M+ + +VG + +LL ++K+ D ++A +AG +A W+
Sbjct: 469 DQVLYQTMIVAYERVGLMGHAKRLLHELKLP----DNIPRETAITILAKAGRTEEATWV 523
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/439 (18%), Positives = 197/439 (44%), Gaps = 18/439 (4%)
Query: 144 LSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVF----AFGSA 199
+S+ K + PD + +I + + F+ A L+ K +E V ++ +
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLI---KEMNEAGVLPNTVSYSTL 301
Query: 200 LRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNL 259
L Y + H F + VF ++K + LD + +++ Y +LD + +LF ++
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 260 RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVG 318
+ Y + G+ EA+ FR+M +K I ++ V Y+T+I + +
Sbjct: 362 EPNVVS----YNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHE 417
Query: 319 EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVV 378
+ L++E +SR + Y ++ ++ + L++ + + ++ + V++ + ++
Sbjct: 418 KATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMI 477
Query: 379 NGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFD 438
+ +R G + +L+ + P + + I + + +A VF + + G
Sbjct: 478 VAY-ERVGLMGHAK---RLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEV 533
Query: 439 KCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKL 498
K + + MI +Y R+ R N +++ KM+ G P+ V +++ +G+++ + + +
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTV 593
Query: 499 WNEMKRRK-VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFS 557
+ EM+ V PD+V + M+ YS +FE LF + V + + ++ ++
Sbjct: 594 YREMQEEGCVFPDEVHF-QMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYE 652
Query: 558 KVGQIDQLVKLLQDMKMEG 576
+ +++ +++ M+ G
Sbjct: 653 RADKLNDASRVMNRMRERG 671
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 206/467 (44%), Gaps = 10/467 (2%)
Query: 122 PEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLI-EFCIRQRKFKIAET 180
PE TL ++ L++F+ + + + D + PD + +I C + + E
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 181 LLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSK 240
+ + + +V + + + K V + + L + D Y ++ K
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 241 LDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFE 300
+ + E +++ E S+ + L E L K G++ EAL + + G+
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSS----LVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 301 SS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV-YLKLVIMYVEEDLLEKTLEV 358
+ VY+ LI S K E E LL + + ++ +V Y L+ M+ L+ L
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAE-LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 359 VEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCR 418
+ M D +K+ +++NG K SAA ++I++ EP VTY S++ YC
Sbjct: 425 LGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCS 484
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
+ NKA +++ EM KG + +++++ R+G +R+A+KL +M E KPN
Sbjct: 485 KGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVT 544
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE-Y 537
YN +I+ + E ++ + + EM + + PD SY +I G+ + +
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 538 RINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
+ N + + G++ G F + G++++ + + Q+M G LD Y
Sbjct: 605 KGNCELNEICYTGLLHG-FCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 174/387 (44%), Gaps = 10/387 (2%)
Query: 213 VLVFEKLKSN-SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIY 270
VLVF+ + + S++ + R S ++ K ++LF++ S +R D Y G I
Sbjct: 176 VLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVI- 234
Query: 271 GVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKS 329
SL + +S A E M G + V Y+ LI KV E + ++
Sbjct: 235 ----RSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAG 290
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
+ D Y LV + E LE+++ M + + ++V G KR
Sbjct: 291 KDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE 350
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
A+ ++++ G P Y ++I++ C+ ++++AE +F+ M + G V YS +I
Sbjct: 351 ALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
M+ R G+L A+ + +M + G K +V+ YNSLI+ H + ++ E EM +K+ P
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVID-RAMAGIMVGVFSKVGQIDQLVKL 568
V+YTS++G Y G+ L++E G ++ G+F + G I VKL
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF-RAGLIRDAVKL 529
Query: 569 LQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+M + ++ Y + E G
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEG 556
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 162/382 (42%), Gaps = 42/382 (10%)
Query: 192 AVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLF 251
+++ F + L + + R V +F ++ +V + Y+ ++E Y + D +
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565
Query: 252 HEFESRNL-RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLIC 309
E + + D+ Y I+G LC + G+ SEA + + K Y+ L+
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHG-LCLT----GQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 310 SFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKV 369
F K+ E + +E R D Y L+ ++ + +++ M D +K
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 370 CDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
D + ++++ SK F A ++ +I++G P +VTY +VIN C+ N+AE +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 430 EEMEQ-----------------------------------KGFDKCVVAYSSMIVMYGRS 454
+M+ KG Y+ +I + R
Sbjct: 741 SKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQ 800
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
GR+ A +L+ +M G P+ Y ++I+ R ++++ +LWN M + + PD+V+Y
Sbjct: 801 GRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAY 860
Query: 515 TSMIGAYSKAGEFETCTELFNE 536
++I AGE TEL NE
Sbjct: 861 NTLIHGCCVAGEMGKATELRNE 882
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/450 (22%), Positives = 182/450 (40%), Gaps = 20/450 (4%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTV 213
+LP+ T S L+ ++ R F +A L N S V+ + +R+ +L R
Sbjct: 188 LLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAK 247
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGV 272
+ +++ ++ Y+ +++ K V + + ++L+ D Y +YG
Sbjct: 248 EMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYG- 306
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFA-SLHKVGEVEELLREAKSRT 331
LC +V E +M + S + S L K G++EE L K
Sbjct: 307 LC-------KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVK--- 356
Query: 332 KIKDPEVYLKLVIMYVEEDLLEKTLEVVEA------MKDADVKVCDCMLCAVVNGFSKRR 385
++ D V L + D L K + EA M ++ D +++ F +R
Sbjct: 357 RVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRG 416
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
A+ +++ G + Y S+IN +C+ + AE EM K + VV Y+
Sbjct: 417 KLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
S++ Y G++ A++L +M +G P+++ + +L+ R +R KL+NEM
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
V P++V+Y MI Y + G+ E E G V D ++ GQ +
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 566 VKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ + L++ Y + F G
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREG 626
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/485 (20%), Positives = 203/485 (41%), Gaps = 12/485 (2%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
+P+ T ++ L + ++++ L + ++ P A S L+E +R+R KI E
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEG-LRKRG-KIEE 350
Query: 180 TLLNAFKSDSEVAV----FAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIM 235
L N K + V F + + + + K F L+F+++ + + YS ++
Sbjct: 351 AL-NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILI 409
Query: 236 EAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK 295
+ + + ++ + E L+ S Y L K G +S A + M
Sbjct: 410 DMFCRRGKLDTALSFLGEMVDTGLKLSV----YPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 296 KGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
K + + V Y++L+ + S K+ + L E + + L+ L+
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVIN 414
+++ M + +VK ++ G+ + S A +++ +G P +Y +I+
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKP 474
C Q ++A+ + + + + + Y+ ++ + R G+L A+ + +M +RG
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 475 NVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
++ Y LID + K+ + L EM R + PD V YTSMI A SK G+F+ ++
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 535 NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
+ G V + ++ K G +++ L M+ + +Q Y + +
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 595 GLQLQ 599
+ +Q
Sbjct: 766 EVDMQ 770
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/485 (20%), Positives = 199/485 (41%), Gaps = 20/485 (4%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
F P ++ + ++ L + K + L++ + + V P+ + LI+ + RKF AE
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387
Query: 180 TLLNAFKSDSEVAVFAFGSALRNYNKL-HMFRR-----TVLVF-EKLKSNSVVLDSRGYS 232
L + + Y+ L MF R T L F ++ + L Y+
Sbjct: 388 LLFD------RMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYN 441
Query: 233 HIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRV 292
++ + K D + E ++ L + + G C G++++AL +
Sbjct: 442 SLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK----GKINKALRLYHE 497
Query: 293 MTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDL 351
MT KGI S ++TL+ + + +L E + Y ++ Y EE
Sbjct: 498 MTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 352 LEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYAS 411
+ K E ++ M + + +++G S A + L E ++ Y
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 412 VINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG 471
+++ +CR + +A V +EM Q+G D +V Y +I + + L+ +M +RG
Sbjct: 618 LLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRG 677
Query: 472 CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
KP+ +Y S+ID + + ++ +W+ M P++V+YT++I KAG
Sbjct: 678 LKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 532 ELFNEYRINGGVIDRAMAGIMVGVFSKVGQID-QLVKLLQDMKMEGTRLDQRLYQSAWNA 590
L ++ + V ++ G + + +K G++D Q L + ++G + Y
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 591 FIEAG 595
F G
Sbjct: 797 FCRQG 801
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 105/550 (19%), Positives = 221/550 (40%), Gaps = 49/550 (8%)
Query: 86 GTENLNEFLC---------------GLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHV 130
G E ++E LC GL + K EE A + +R+ D V P +
Sbjct: 316 GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEE-ALNLVKRVVDFGV-SPNLFVYNAL 373
Query: 131 IRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAF-KSDS 189
I L + +K+ + + + P+ T S LI+ R+ K A + L +
Sbjct: 374 IDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGL 433
Query: 190 EVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVK 249
+++V+ + S + + K ++ + + Y+ +M Y ++
Sbjct: 434 KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALR 493
Query: 250 LFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLI 308
L+HE + + S + L L + G + +A++ F M + + + V Y+ +I
Sbjct: 494 LYHEMTGKGIAPSI----YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMI 549
Query: 309 CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK 368
+ + + E L+E + + D Y L+ + V+ + + +
Sbjct: 550 EGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCE 609
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
+ + +++GF + A+ ++++ +G + V Y +I+ S +K K+
Sbjct: 610 LNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG----SLKHKDRKL 665
Query: 429 F----EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
F +EM +G V Y+SMI ++G + A + M GC PN Y ++I+
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 485 MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG-EFETCTELFNEYRINGGV 543
+ + + E L ++M+ P++V+Y + +K + + EL N + G +
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI-LKGLL 784
Query: 544 IDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA---------------- 587
+ A +++ F + G+I++ +L+ M +G D Y +
Sbjct: 785 ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 588 WNAFIEAGLQ 597
WN+ E G++
Sbjct: 845 WNSMTEKGIR 854
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 141/341 (41%), Gaps = 12/341 (3%)
Query: 138 KKWDFILSVSEDFKIYHVLPDGATCSKLIE-FCIRQRKFKIAETLLNAFKSDSEVAVFAF 196
K ++F+ ++E ++PD + LI C+ + + + K + E+ +
Sbjct: 560 KAFEFLKEMTEK----GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Query: 197 GSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFES 256
L + + + V +++ V LD Y +++ K D + L E
Sbjct: 616 TGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD 675
Query: 257 RNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLH 315
R L+ IY + ++ K G EA + +M +G + V Y+ +I
Sbjct: 676 RGLKPDD----VIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAG 731
Query: 316 KVGEVEELLREAKSRTKIKDPEVY-LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCML 374
V E E L + + + + + Y L I+ E ++K +E+ A+ +
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKG-LLANTATY 790
Query: 375 CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQ 434
++ GF ++ A ++I G P +TY ++IN CR + KA +++ M +
Sbjct: 791 NMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTE 850
Query: 435 KGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN 475
KG VAY+++I +G + A +L +M +G PN
Sbjct: 851 KGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 211/499 (42%), Gaps = 22/499 (4%)
Query: 107 AFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLI 166
A D ++R+++ P + ++ + K+W + S+ F+ V P+ T + LI
Sbjct: 97 ALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 167 EFCIRQRKFKIAETLLN-----AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKS 221
+ ++++F+ A L+ FK D VF++ + + + K + +F+++
Sbjct: 157 KMSCKKKEFEKARGFLDWMWKEGFKPD----VFSYSTVINDLAKAGKLDDALELFDEMSE 212
Query: 222 NSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLG-QIYGVLCESLGKC 280
V D Y+ +++ + K D ++ ++L+ R L DS Y + + ++ L KC
Sbjct: 213 RGVAPDVTCYNILIDGFLKEKDHKTAMELW----DRLLEDSSVYPNVKTHNIMISGLSKC 268
Query: 281 GRVSEALEYFRVMTK----KGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
GRV + L+ + M + K ++ YS+LI V + E + E R D
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLY---TYSSLIHGLCDAGNVDKAESVFNELDERKASIDV 325
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEK 396
Y ++ + ++++LE+ M+ + V ++ G + A +
Sbjct: 326 VTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
+ ++GY + TY I+ C NKA V +E+E G V AY+S+I + R
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
L A LV +M + G + N V N+LI R+ L + EM + P VSY
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 517 MIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
+I KAG+F + E NG D I++ + +ID ++L G
Sbjct: 505 LICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSG 564
Query: 577 TRLDQRLYQSAWNAFIEAG 595
D ++ + G
Sbjct: 565 LETDVMMHNILIHGLCSVG 583
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/494 (18%), Positives = 191/494 (38%), Gaps = 76/494 (15%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
F+P+ + VI L + K D L + ++ V PD + LI+ ++++ K A
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 180 TLLNAFKSDSEV--AVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEA 237
L + DS V V + +K + ++E++K N D YS ++
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 238 YSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKK- 296
+ + +F+E + R + G C +CG++ E+LE +R+M K
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFC----RCGKIKESLELWRIMEHKN 355
Query: 297 ------------GIFES----------------------SVYSTLICSFASLHKVGEVEE 322
G+ E+ + Y I V +
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 323 LLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK----VCDCMLCAVV 378
+++E +S D Y ++ ++ LE+ +V+ M V+ VC+ ++ ++
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 379 N-------------------------------GFSKRRGFSAAVRAYEKLISQGYEPGQV 407
G K F A ++++ G++P
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
TY+ ++ CR + + A +++ + Q G + V+ ++ +I G+L +AM ++A M
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
+ R C N+ YN+L++ + + + +W M + + PD +SY +++
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Query: 528 ETCTELFNEYRING 541
E F++ R +G
Sbjct: 656 SYAMEFFDDARNHG 669
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 118/260 (45%), Gaps = 2/260 (0%)
Query: 338 VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKL 397
VY ++ E ++ +VE ++ + K + + +V+ + K A+ ++++
Sbjct: 45 VYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRM 104
Query: 398 ISQ-GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
G EP +Y +++NA+ Q+ K E +F E G + Y+ +I M +
Sbjct: 105 REIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE 164
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
A + M + G KP+V+ Y+++I+ + L +L++EM R VAPD Y
Sbjct: 165 FEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNI 224
Query: 517 MIGAYSKAGEFETCTELFNEYRINGGVIDRAMA-GIMVGVFSKVGQIDQLVKLLQDMKME 575
+I + K + +T EL++ + V IM+ SK G++D +K+ + MK
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQN 284
Query: 576 GTRLDQRLYQSAWNAFIEAG 595
D Y S + +AG
Sbjct: 285 EREKDLYTYSSLIHGLCDAG 304
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 186/424 (43%), Gaps = 31/424 (7%)
Query: 170 IRQRKFKIAETLLNAFKSDSEV--AVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLD 227
+R KF AET+L +D + +++++ + KL M + +K N V D
Sbjct: 337 VRHGKFIEAETVLKQM-TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPD 395
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIY--GVLCESLGKCGRVSE 285
+ Y ++ Y + ++ L E N L Y +L SL K GR+SE
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC------LPNAYTCNILLHSLWKMGRISE 449
Query: 286 ALEYFRVMTKKGIFESSVYSTLI----CSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
A E R M +KG +V +I C L K E+ + +R S Y+
Sbjct: 450 AEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG 509
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
LV ++ L+E + D ++NG K F+ A + +++ +
Sbjct: 510 LV----DDSLIENN-----CLPDL------ITYSTLLNGLCKAGRFAEAKNLFAEMMGEK 554
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
+P V Y I+ +C+ + + A +V ++ME+KG K + Y+S+I+ G ++
Sbjct: 555 LQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIH 614
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
L+ +MKE+G PN+ YN+ I + + L +EM ++ +AP+ S+ +I A+
Sbjct: 615 GLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAF 674
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
K +F+ E+F E ++ + +M GQ+ + +LL+ + G L
Sbjct: 675 CKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGT 733
Query: 582 RLYQ 585
LY+
Sbjct: 734 FLYK 737
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
Y+ ++ G P T+ +I A C S + A ++F+EM +KG + ++ Y +
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
+G ++L+ M+ G PN +YN+++ RE EK+ +M+ + PD V+
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVT 254
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGV----IDRAMAGIMVGVFSKVGQIDQLVKLL 569
+ S I A K G+ + +F++ ++ + + +M+ F KVG LL
Sbjct: 255 FNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVG-------LL 307
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQ 604
+D K L++S A LQ WLQ
Sbjct: 308 EDAK--------TLFESIRENDDLASLQSYNIWLQ 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/519 (19%), Positives = 202/519 (38%), Gaps = 52/519 (10%)
Query: 107 AFDYYQRLKDR-PVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKL 165
AF +Q ++ R P +P ++ ++ ++ +F+ + +D + + P T + L
Sbjct: 94 AFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLL 153
Query: 166 IEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSV 224
I A L + + F FG +R Y K + + + + ++S V
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV 213
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVS 284
+ + Y+ I+ ++ + + K+ + L LC K G+V
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC----KEGKVL 269
Query: 285 EALEYFRVMTKKGIF-----ESSVYSTLI---CSFASLHKVGEVEELLREAKSRTKIKDP 336
+A F M S Y+ ++ C L + E +RE ++
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 337 EVYLKLVI---MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
++L+ ++ ++E + V++ M D + +++G K S A
Sbjct: 330 NIWLQGLVRHGKFIEAE------TVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV-AYSSMIVMYG 452
+ G P VTY +++ YC + + + A+ + +EM + + C+ AY+ I+++
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMR---NNCLPNAYTCNILLHS 440
Query: 453 --RSGRLRNAMKLVAKMKERGCKPNVWVYNSLID-------------------MHGREK- 490
+ GR+ A +L+ KM E+G + N ++D +HG
Sbjct: 441 LWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAAL 500
Query: 491 -NLRQ--LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRA 547
NL + + + + PD ++Y++++ KAG F LF E D
Sbjct: 501 GNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSV 560
Query: 548 MAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
I + F K G+I ++L+DM+ +G Y S
Sbjct: 561 AYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNS 599
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/446 (17%), Positives = 172/446 (38%), Gaps = 24/446 (5%)
Query: 165 LIEFCIRQRKFKIAETLL-NAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNS 223
L+E CI++R+ + L + + F +R +F+++
Sbjct: 118 LLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 224 VVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRV 283
+ + ++ Y K + ++L + ES + +K IY + S + GR
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNK----VIYNTIVSSFCREGRN 233
Query: 284 SEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPE----V 338
++ + M ++G+ V +++ I + KV + + + + + P
Sbjct: 234 DDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Query: 339 YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLI 398
Y ++ + + LLE + E++++ D + G + F A +++
Sbjct: 294 YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMT 353
Query: 399 SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLR 458
+G P +Y +++ C+L + A+ + M++ G V Y ++ Y G++
Sbjct: 354 DKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVD 413
Query: 459 NAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
A L+ +M C PN + N L+ + + + E+L +M + D V+ ++
Sbjct: 414 AAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
+GE + E+ R++G + +G L+ D +E
Sbjct: 474 DGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIG-------------LVDDSLIENNC 520
Query: 579 L-DQRLYQSAWNAFIEAGLQLQAKWL 603
L D Y + N +AG +AK L
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNL 546
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/262 (19%), Positives = 112/262 (42%), Gaps = 12/262 (4%)
Query: 270 YGVLCESLGKCGRVSEALEYF-RVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAK 328
Y L L K GR +EA F +M +K +S Y+ I F K+ +L++ +
Sbjct: 527 YSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
+ K E Y L++ ++ + + +++ MK+ + C + +
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM-----EQKGFDKCVVA 443
A ++++ + P ++ +I A+C++ ++ A++VFE +++G
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------ 700
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
YS M +G+L A +L+ + +RG + ++Y L++ ++ L + ++M
Sbjct: 701 YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMI 760
Query: 504 RRKVAPDKVSYTSMIGAYSKAG 525
R D + +I K G
Sbjct: 761 DRGYGFDPAALMPVIDGLGKMG 782
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 114/291 (39%), Gaps = 8/291 (2%)
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVL 273
LV + L N+ + D YS ++ K LF E L+ Y +
Sbjct: 510 LVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDS----VAYNIF 565
Query: 274 CESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTK 332
K G++S A + M KKG +S Y++LI +++ E+ L+ E K +
Sbjct: 566 IHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGI 625
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
+ Y + E + +E +++ M ++ ++ F K F A
Sbjct: 626 SPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQE 685
Query: 393 AYEKLISQ-GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
+E +S G + G Y+ + N Q KA ++ E + +GF+ Y ++
Sbjct: 686 VFETAVSICGQKEG--LYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESL 743
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
+ L A ++ KM +RG + +ID G+ N ++ ++M
Sbjct: 744 CKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 170/370 (45%), Gaps = 15/370 (4%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
+S ++ A +K++ + V+ L + ++ + + Y +L + ++S AL
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNL----YTYSILINCFCRRSQLSLALAVL 139
Query: 291 RVMTKKGIFESSVYS--TLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
M K G +E + + +L+ F +++ + L+ + D + L+
Sbjct: 140 AKMMKLG-YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCA---VVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
+ + + +V+ M VK C L VVNG KR A+ +K+ EPG
Sbjct: 199 HNRASEAVALVDRMV---VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
V Y ++I+A C N A +F EM+ KG VV Y+S+I GR +A +L++
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
M ER PNV +++LID +E L + EKL++EM +R + PD +Y+S+I +
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 526 EFETCTELFNEYRINGGVIDRAMA-GIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
+ +F E I+ + ++ F K ++D+ ++L ++M G + Y
Sbjct: 376 RLDEAKHMF-ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 585 QSAWNAFIEA 594
+ + F +A
Sbjct: 435 TTLIHGFFQA 444
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/509 (19%), Positives = 206/509 (40%), Gaps = 10/509 (1%)
Query: 98 FQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLP 157
D K ++ + +K RP P ++ + + K+D ++S+ E + +
Sbjct: 57 LNDLKLDDAVNLFGDMVKSRPF--PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH 114
Query: 158 DGATCSKLIE-FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVF 216
+ T S LI FC R + L K E + S L + + V +
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCES 276
++ DS ++ ++ + + V L + + YG++
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDL----VTYGIVVNG 230
Query: 277 LGKCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIK 334
L K G + AL + M ++G E V Y+T+I + + V + L E ++
Sbjct: 231 LCKRGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRP 289
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
+ Y L+ ++ M + + A+++ F K A + Y
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+++I + +P TY+S+IN +C + ++A+ +FE M K VV Y+++I + ++
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
R+ M+L +M +RG N Y +LI + + + ++ +M V PD ++Y
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 515 TSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKM 574
+ ++ G+ ET +F + + D IM+ K G+++ L + +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 575 EGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+G + + Y + + F GL+ +A L
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADAL 558
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 194/490 (39%), Gaps = 60/490 (12%)
Query: 85 PGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFR---PEKSTLKHVIRYLMRFKKWD 141
P + N + GLF+ + E L DR V + P+ T V+ L + D
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAV-----ALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 142 FILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSAL 200
LS+ + + + P + +I+ + A L + V + S +
Sbjct: 239 LALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 201 R---NYNKLHMFRRTV--LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFE 255
R NY + R + ++ K+ N V +S +++A+ K KL+ E
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVT-----FSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 256 SRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASL 314
R++ D + Y L R+ EA F +M K F + V Y+TLI F
Sbjct: 354 KRSI-DPDIF---TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 315 HKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCML 374
+V E EL RE R + + Y L+
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLI------------------------------- 438
Query: 375 CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQ 434
+GF + R A +++++S G P +TY+ +++ C + A VFE +++
Sbjct: 439 ----HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 435 KGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQ 494
+ + Y+ MI ++G++ + L + +G KPNV Y +++ R+ +
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 495 LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
+ L+ EMK PD +Y ++I A+ + G+ EL E R V D + G++
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTN 614
Query: 555 VFSKVGQIDQ 564
+ G++D+
Sbjct: 615 MLHD-GRLDK 623
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 153/344 (44%), Gaps = 5/344 (1%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y+ I++A + + LF E +++ +R + + LC GR S+A
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY----GRWSDASRLL 314
Query: 291 RVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE 349
M ++ I + V +S LI +F K+ E E+L E R+ D Y L+ +
Sbjct: 315 SDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH 374
Query: 350 DLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
D L++ + E M D ++ GF K + + + ++ +G VTY
Sbjct: 375 DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE 469
++I+ + + + + A+ VF++M G ++ YS ++ +G++ A+ + ++
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQR 494
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFET 529
+P+++ YN +I+ + + L+ + + V P+ V+YT+M+ + + G E
Sbjct: 495 SKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 530 CTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
LF E + G + D ++ + G +L+++M+
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 598
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 179/430 (41%), Gaps = 10/430 (2%)
Query: 176 KIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVV------LDSR 229
KI+ LN K D V +F R + + F + + K+ +V + +
Sbjct: 51 KISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL 110
Query: 230 GYSHIMEAYSKLDDC---ESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
G SH + YS L +C S + L ++ ++ L R+S+A
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDA 170
Query: 287 LEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
+ M + G +S ++TLI ++ E L+ + D Y +V
Sbjct: 171 VSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNG 230
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
+ ++ L +++ M+ ++ + +++ + + A+ + ++ ++G P
Sbjct: 231 LCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
VTY S+I C +++ A ++ +M ++ + VV +S++I + + G+L A KL
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
+M +R P+++ Y+SLI+ L + + ++ M + P+ V+Y ++I + KA
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 526 EFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
+ ELF E G V + ++ F + + D + + M +G D Y
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYS 470
Query: 586 SAWNAFIEAG 595
+ G
Sbjct: 471 ILLDGLCNNG 480
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/523 (21%), Positives = 212/523 (40%), Gaps = 43/523 (8%)
Query: 110 YYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFC 169
+ + +K RP P ++ + + K+D ++S+ E + + + T S LI
Sbjct: 69 FGEMVKSRPF--PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 126
Query: 170 IRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKL-----KSNS 223
R+ + +A +L K E + S L Y V + +++ + N+
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 224 VVLDS-----------------------RG-------YSHIMEAYSKLDDCESVVKLFHE 253
V ++ +G Y ++ K D + L ++
Sbjct: 187 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 246
Query: 254 FESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFA 312
E L IY + + L K + +AL F+ M KGI + V YS+LI
Sbjct: 247 MEQGKLEPGV----LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 313 SLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDC 372
+ + + LL + R D + L+ +V+E L + ++ + M +
Sbjct: 303 NYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIV 362
Query: 373 MLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
+++NGF A + +E ++S+ P VTY ++I +C+ + + +VF EM
Sbjct: 363 TYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422
Query: 433 EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL 492
Q+G V Y+ +I ++G A ++ +M G PN+ YN+L+D + L
Sbjct: 423 SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKL 482
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
+ ++ ++R K+ P +Y MI KAG+ E +LF + G D M
Sbjct: 483 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ F + G ++ L ++MK +GT + Y + A + G
Sbjct: 543 ISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/366 (21%), Positives = 160/366 (43%), Gaps = 33/366 (9%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLR--------------------DSKRYLGQI- 269
Y+ I++ K + + LF E E++ +R D+ R L +
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 270 ----------YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVG 318
+ L ++ K G++ EA + + M K+ I S V YS+LI F ++
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 319 EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVV 378
E +++ S+ D Y L+ + + +E+ +EV M + ++
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 379 NGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFD 438
G + A +++++S G P +TY ++++ C+ + KA VFE +++ +
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498
Query: 439 KCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKL 498
+ Y+ MI ++G++ + L + +G KP+V YN++I R+ + + + L
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558
Query: 499 WNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSK 558
+ EMK P+ Y ++I A + G+ E EL E R G D + G++ +
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618
Query: 559 VGQIDQ 564
G++D+
Sbjct: 619 -GRLDK 623
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 142/314 (45%), Gaps = 7/314 (2%)
Query: 282 RVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
++ +A+ F M K F S + +S L+ + A ++K V L + ++ + Y
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
L+ + L L V+ M + L +++NG+ + S AV +++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
GY+P VT+ ++I+ ++ ++A + + M KG +V Y ++ + G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
L+ KM++ +P V +YN++ID + K++ L+ EM+ + + P+ V+Y+S+I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 521 YSKAGEFETCTELFN---EYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
G + + L + E +IN V + ++ F K G++ + KL +M
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSA---LIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 578 RLDQRLYQSAWNAF 591
Y S N F
Sbjct: 358 DPSIVTYSSLINGF 371
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 165/372 (44%), Gaps = 19/372 (5%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFE----SRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
+S ++ A +K+ + V+ + E S NL Y ++ L + ++S A
Sbjct: 68 FSKLLSAIAKMKKFDLVISFGEKMEILGVSHNL--------YTYNIMINCLCRRSQLSFA 119
Query: 287 LEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
L M K G S V ++L+ F +++ E L+ + D + LV
Sbjct: 120 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLC---AVVNGFSKRRGFSAAVRAYEKLISQGY 402
+ + + + +VE M VK C L AV+NG KR A+ K+
Sbjct: 180 LFQHNKASEAVALVERMV---VKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKI 236
Query: 403 EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMK 462
E V Y++VI++ C+ + A +F EM+ KG V YSS+I GR +A +
Sbjct: 237 EADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 296
Query: 463 LVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYS 522
L++ M ER PNV +NSLID +E L + EKL++EM +R + P+ V+Y S+I +
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 523 KAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQR 582
+ ++F + D ++ F K ++ ++L +DM G +
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 583 LYQSAWNAFIEA 594
Y + + F +A
Sbjct: 417 TYTTLIHGFFQA 428
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 107/531 (20%), Positives = 209/531 (39%), Gaps = 43/531 (8%)
Query: 102 KTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGAT 161
K +E + + +K RP P ++ + + KK+D ++S E +I V + T
Sbjct: 45 KLDEAVDLFGEMVKSRPF--PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYT 102
Query: 162 CSKLIEFCIRQRKFKIA-------------------ETLLNAFKSDSEVA---------- 192
+ +I R+ + A +LLN F + ++
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 193 -------VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCE 245
F + + + + V + E++ D Y ++ K + +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 246 SVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVY 304
+ L ++ E + IY + +SL K V +AL F M KGI + Y
Sbjct: 223 LALNLLNKMEKGKIEADV----VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD 364
S+LI + + + LL + R + + L+ + +E L + ++ + M
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 365 ADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNK 424
+ +++NGF A + + ++S+ P VTY ++IN +C+ +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 425 AEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
++F +M ++G V Y+++I + ++ NA + +M G PN+ YN+L+D
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 485 MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVI 544
+ L + ++ +++ K+ PD +Y M KAG+ E +LF + G
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKP 518
Query: 545 DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
D M+ F K G ++ L MK +G D Y + A + G
Sbjct: 519 DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 163/360 (45%), Gaps = 5/360 (1%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ K++ + D YS ++++ K + + LF E +++ +R + LC
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
GR S+A M ++ I + V +++LI +FA K+ E E+L E R+
Sbjct: 287 NY----GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 342
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+ Y L+ + D L++ ++ M D ++NGF K + +
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+ + +G VTY ++I+ + + S + A+ VF++M G ++ Y++++ +
Sbjct: 403 FRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCK 462
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
+G+L AM + +++ +P+++ YN + + + + L+ + + V PD ++
Sbjct: 463 NGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIA 522
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
Y +MI + K G E LF + + +G + D ++ + G +L+++M+
Sbjct: 523 YNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/452 (19%), Positives = 183/452 (40%), Gaps = 28/452 (6%)
Query: 168 FCIRQRKF----------KIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFE 217
FC+R F K++ L K D V +F R + + F + +
Sbjct: 17 FCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIA 76
Query: 218 KLKSNSVV------LDSRGYSHIMEAYSKLDDC-------ESVVKLFHEFESRNLRDSKR 264
K+K +V ++ G SH + Y+ + +C + + + S
Sbjct: 77 KMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIV 136
Query: 265 YLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEEL 323
L + C R+SEA+ M + G +V ++TL+ +K E L
Sbjct: 137 TLNSLLNGFCHG----NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 324 LREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
+ + D Y ++ + + L ++ M+ ++ + V++ K
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
R A+ + ++ ++G P TY+S+I+ C +++ A ++ +M ++ + VV
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
++S+I + + G+L A KL +M +R PN+ YNSLI+ L + ++++ M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
+ PD V+Y ++I + KA + ELF + G V + ++ F + D
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 564 QLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ + M +G + Y + + + G
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 464
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/459 (19%), Positives = 191/459 (41%), Gaps = 14/459 (3%)
Query: 85 PGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPV---FRPEKSTLKHVIRYLMRFKKWD 141
P LN L G + E L D+ V ++P+ T ++ L + K
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAV-----ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 142 FILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAF-KSDSEVAVFAFGSAL 200
+++ E + PD T +I ++ + +A LLN K E V + + +
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 201 RNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR 260
+ K + +F ++ + + D YS ++ +L + R +
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 261 DSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGE 319
+ + L ++ K G++ EA + F M ++ I + V Y++LI F ++ E
Sbjct: 308 PNV----VTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 320 VEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVN 379
+++ S+ + D Y L+ + + + +E+ M + +++
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 380 GFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDK 439
GF + A +++++S G P +TY ++++ C+ + KA VFE +++ +
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 440 CVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW 499
+ Y+ M ++G++ + L + +G KP+V YN++I ++ + L+
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYR 538
+MK PD +Y ++I A+ + G+ EL E R
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 582
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 172/437 (39%), Gaps = 18/437 (4%)
Query: 85 PGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFIL 144
P T + GLFQ K E A +R+ + +P+ T VI L + + D L
Sbjct: 168 PDTVTFTTLVHGLFQHNKASE-AVALVERMVVKGC-QPDLVTYGAVINGLCKRGEPDLAL 225
Query: 145 SVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGS---AL 200
++ + + D S +I+ + R A L + VF + S L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 201 RNYNKLHMFRRTV--LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRN 258
NY + R + ++ K+ N V +S +++A++K KLF E R+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNS-----LIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 259 LRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKV 317
+ + + C R+ EA + F +M K V Y+TLI F KV
Sbjct: 341 IDPNIVTYNSLINGFCMH----DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
+ EL R+ R + + Y L+ + + + V + M V +
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTL 456
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
++G K A+ +E L EP TY + C+ + +F + KG
Sbjct: 457 LDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGV 516
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
V+AY++MI + + G A L KMKE G P+ YN+LI H R+ + +
Sbjct: 517 KPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 576
Query: 498 LWNEMKRRKVAPDKVSY 514
L EM+ + A D +Y
Sbjct: 577 LIKEMRSCRFAGDASTY 593
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 106/227 (46%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++N +R S A+ K++ GY P VT S++N +C ++ ++A + ++M + G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ V +++++ + + A+ LV +M +GC+P++ Y ++I+ +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
L N+M++ K+ D V Y+++I + K + LF E G D ++
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
G+ +LL DM + + S +AF + G ++A+ L
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 115/220 (52%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++VNGF +R S AV +K++ GY+P V Y ++I++ C+ + N A F+E+E+K
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G VV Y++++ S R +A +L++ M ++ PNV Y++L+D + + +
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
++L+ EM R + PD V+Y+S+I + ++F+ G + D ++
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
F K +++ +KL ++M G + Y + F +AG
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 197/481 (40%), Gaps = 43/481 (8%)
Query: 98 FQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLP 157
+D K + + +K RP P ++ +++ KK+D ++S+ + ++ +
Sbjct: 61 LRDIKLNDAIDLFSDMVKSRPF--PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN 118
Query: 158 DGATCSKLIE-FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVF 216
D T + +I FC + L K E GS + + + + V +
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCES 276
+K+ D Y+ I+++ K F E E + +R + + LC S
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 277 LGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKD 335
R S+A M KK I + + YS L+ +F KV E +EL E
Sbjct: 239 ----SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE--------- 285
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYE 395
+V M ++ D++ + +++NG A + ++
Sbjct: 286 ------MVRMSIDPDIVTYS--------------------SLINGLCLHDRIDEANQMFD 319
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
++S+G V+Y ++IN +C+ + K+F EM Q+G V Y+++I + ++G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
+ A + ++M G P++W YN L+ L + ++ +M++R++ D V+YT
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 516 SMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
++I K G+ E LF + G D M+ G + ++ L MK E
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Query: 576 G 576
G
Sbjct: 500 G 500
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 166/373 (44%), Gaps = 6/373 (1%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
++ ++ A KL + V+ L + E +R+ + C C +VS AL
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFC----CCFQVSLALSIL 143
Query: 291 RVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE 349
M K G V +L+ F ++V + L+ + D Y ++ +
Sbjct: 144 GKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKT 203
Query: 350 DLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
+ + + ++ ++ A+VNG +S A R +I + P +TY
Sbjct: 204 KRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE 469
+++++A+ + + +A+++FEEM + D +V YSS+I R+ A ++ M
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVS 323
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFET 529
+GC +V YN+LI+ + K + KL+ EM +R + + V+Y ++I + +AG+ +
Sbjct: 324 KGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDK 383
Query: 530 CTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWN 589
E F++ G D I++G G++++ + + +DM+ LD Y +
Sbjct: 384 AQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIR 443
Query: 590 AFIEAGLQLQAKW 602
+ G +++ W
Sbjct: 444 GMCKTG-KVEEAW 455
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 147/328 (44%), Gaps = 36/328 (10%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
Y + +SL K RV++A ++F+ + +KGI + V Y+ L+ + + + LL +
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
+ + VI Y A+++ F K
Sbjct: 253 KKKITPN-------VITY----------------------------SALLDAFVKNGKVL 277
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A +E+++ +P VTY+S+IN C + ++A ++F+ M KG VV+Y+++I
Sbjct: 278 EAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLI 337
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
+ ++ R+ + MKL +M +RG N YN+LI + ++ + ++ +++M ++
Sbjct: 338 NGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGIS 397
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
PD +Y ++G GE E +F + + +D ++ K G++++ L
Sbjct: 398 PDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSL 457
Query: 569 LQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
+ ++G + D Y + + GL
Sbjct: 458 FCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 123/282 (43%), Gaps = 49/282 (17%)
Query: 324 LREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
LRE S+T+++D ++ D ++ ++V++ + + +L A+V K
Sbjct: 52 LRERLSKTRLRDIKL----------NDAIDLFSDMVKSRPFPSIVDFNRLLSAIV----K 97
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
+ + + +K+ G T+ VIN +C Q + A + +M + G++ V
Sbjct: 98 LKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVT 157
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
S++ + R R+ +A+ LV KM E G KP++ YN++ID + K + + E++
Sbjct: 158 IGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE 217
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
R+ + P+ V+YT+++ + + D A
Sbjct: 218 RKGIRPNVVTYTALVNGLCNSSRWS----------------DAA---------------- 245
Query: 564 QLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
+LL DM + + Y + +AF++ G L+AK L E
Sbjct: 246 ---RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFE 284
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 101/251 (40%), Gaps = 15/251 (5%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLCESLGKCGRVSEALEY 289
YS +++A+ K +LF E ++ D Y I G+ R+ EA +
Sbjct: 263 YSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD-----RIDEANQM 317
Query: 290 FRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
F +M KG V Y+TLI F +V + +L RE R + + Y L+ + +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 349 EDLLEKTLEVVEAMK----DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEP 404
++K E M D+ + +L G A+ +E + + +
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILL----GGLCDNGELEKALVIFEDMQKREMDL 433
Query: 405 GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLV 464
VTY +VI C+ + +A +F + KG +V Y++M+ G L L
Sbjct: 434 DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALY 493
Query: 465 AKMKERGCKPN 475
KMK+ G N
Sbjct: 494 TKMKQEGLMKN 504
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 206/498 (41%), Gaps = 41/498 (8%)
Query: 97 LFQDPKTEELAFDYYQRLKDRPVFRPEKST-LKHVIRYLMRFKKWD-----FILSVSEDF 150
L+ DP E+L FD L P++ P LK + +F KW F SV
Sbjct: 92 LWDDPGLEKL-FD----LTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYC 146
Query: 151 KIYHVLPDGATCSKLIEFCIRQ--------RKFKIAETLLNAFK---SDSEVAVFAFG-- 197
+ H+L FC R ++ +++ + F S V V FG
Sbjct: 147 IVAHIL-----------FCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVF 195
Query: 198 -SALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFES 256
+ L M + F K+K V +R + ++ ++KL + V + F +
Sbjct: 196 DALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIG 255
Query: 257 RNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLH 315
R + Y ++ + + K G V A F M +G+ +V Y+++I F +
Sbjct: 256 AGARPTVF----TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 316 KVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
++ + E K D Y L+ + + L LE MK +K
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+V+ F K A++ Y + G P + TY S+I+A C++ + A ++ EM Q
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G + VV Y+++I + R++ A +L KM G PN+ YN+LI + KN+ +
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
+L NE+K R + PD + Y + I + E + NE + G + + ++
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 556 FSKVGQIDQLVKLLQDMK 573
+ K G + + LL +MK
Sbjct: 552 YFKSGNPTEGLHLLDEMK 569
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 148/319 (46%), Gaps = 1/319 (0%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREA 327
++ L L G + EA++ F M + +F ++ + L+ FA L K +V+ ++
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
Y ++ +E +E + E MK + ++++GF K
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
V +E++ EP +TY ++IN +C+ + + + EM+ G VV+YS++
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
+ + + G ++ A+K M+ G PN + Y SLID + + NL +L NEM + V
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
+ V+YT++I A + ELF + G + + A ++ F K +D+ ++
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 568 LLQDMKMEGTRLDQRLYQS 586
LL ++K G + D LY +
Sbjct: 494 LLNELKGRGIKPDLLLYGT 512
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 151/330 (45%), Gaps = 13/330 (3%)
Query: 273 LCESLGKCGRVSEALEYFRVMTKKG----IFESSVYSTLICSFASLHKVGEVEE---LLR 325
L K G+ + +F+ M G +F ++ +C K G+VE L
Sbjct: 233 LLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMC------KEGDVEAARGLFE 286
Query: 326 EAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRR 385
E K R + D Y ++ + + L+ T+ E MKD + A++N F K
Sbjct: 287 EMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFG 346
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
+ Y ++ G +P V+Y+++++A+C+ +A K + +M + G Y+
Sbjct: 347 KLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
S+I + G L +A +L +M + G + NV Y +LID + +++ E+L+ +M
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
V P+ SY ++I + KA + EL NE + G D + G + + +I+
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 566 VKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
++ +MK G + + +Y + +A+ ++G
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSG 556
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/463 (20%), Positives = 192/463 (41%), Gaps = 35/463 (7%)
Query: 105 ELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSK 164
E A ++ +K R + P+ T +I + + D + E+ K PD T +
Sbjct: 279 EAARGLFEEMKFRGLV-PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 165 LIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNS 223
LI + K I K + + V ++ + + + K M ++ + + ++
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 224 VVLDSRGYSHIMEAYSKLDDCESVVKLFHEF--------------------ESRNLRDSK 263
+V + Y+ +++A K+ + +L +E ++ +++++
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 264 RYLGQI-----------YGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSF 311
G++ Y L K + ALE + +GI + +Y T I
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 312 ASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCD 371
SL K+ + ++ E K + +Y L+ Y + + L +++ MK+ D++V
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 577
Query: 372 CMLCAVVNGFSKRRGFSAAVRAYEKLISQ-GYEPGQVTYASVINAYCRLSQYNKAEKVFE 430
C +++G K + S AV + ++ + G + + ++I+ C+ +Q A +FE
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Query: 431 EMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREK 490
+M QKG AY+S++ + G + A+ L KM E G K ++ Y SL+
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 697
Query: 491 NLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTEL 533
L++ EM + PD+V S++ + + G + EL
Sbjct: 698 QLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/393 (19%), Positives = 164/393 (41%), Gaps = 6/393 (1%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+FE++K +V D+ Y+ +++ + K+ + V F E + Y L
Sbjct: 284 LFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDV----ITYNALI 339
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
K G++ LE++R M G+ + V YSTL+ +F + + + + + +
Sbjct: 340 NCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLV 399
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+ Y L+ + L + M V+ A+++G A
Sbjct: 400 PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEEL 459
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+ K+ + G P +Y ++I+ + + ++A ++ E++ +G ++ Y + I
Sbjct: 460 FGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCS 519
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
++ A ++ +MKE G K N +Y +L+D + + N + L +EMK + V+
Sbjct: 520 LEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVT 579
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGV-IDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
+ +I K + FN + G+ + A+ M+ K Q++ L + M
Sbjct: 580 FCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQM 639
Query: 573 KMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
+G D+ Y S + + G L+A L++
Sbjct: 640 VQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/575 (18%), Positives = 223/575 (38%), Gaps = 50/575 (8%)
Query: 71 NVNNIAGSHQQYSNPGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHV 130
+V ++ S + PG + L EE A + ++K VF P+ + +
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEE-AIQCFSKMKRFRVF-PKTRSCNGL 233
Query: 131 IRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSE 190
+ + K D + +D P T + +I+ ++ + A L K
Sbjct: 234 LHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGL 293
Query: 191 VA-VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVK 249
V + S + + K+ TV FE++K D Y+ ++ + K ++
Sbjct: 294 VPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 250 LFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLI 308
+ E + L+ + Y L ++ K G + +A++++ M + G+ + Y++LI
Sbjct: 354 FYREMKGNGLKPNVVS----YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 309 CSFASLHKVGEVEELLREAKSRTKIK---DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA 365
+ K+G + + R ++ + Y L+ + + +++ E+ M A
Sbjct: 410 ---DANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466
Query: 366 DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKA 425
V A+++GF K + A+ +L +G +P + Y + I C L + A
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526
Query: 426 EKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER--------------- 470
+ V EM++ G + Y++++ Y +SG + L+ +MKE
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586
Query: 471 ---------------------GCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
G + N ++ ++ID ++ + L+ +M ++ + P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
D+ +YTS++ K G L ++ G +D +V S Q+ + L
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFL 706
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQ 604
++M EG D+ L S E G +A LQ
Sbjct: 707 EEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQ 741
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 142/326 (43%), Gaps = 2/326 (0%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKS 329
Y V+ K G ++ AL M+ + Y+T++ S K+ + E+L
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSP--DVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
R D Y L+ + + +++++ M+D +VNG K
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
A++ + S G +P +T+ ++ + C ++ AEK+ +M +KGF VV ++ +I
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
R G L A+ ++ KM + GC+PN YN L+ +EK + + + M R P
Sbjct: 353 FLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYP 412
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
D V+Y +M+ A K G+ E E+ N+ G ++ +K G+ + +KLL
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAG 595
+M+ + + D Y S G
Sbjct: 473 DEMRAKDLKPDTITYSSLVGGLSREG 498
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/439 (20%), Positives = 192/439 (43%), Gaps = 47/439 (10%)
Query: 200 LRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNL 259
+R + +L R+ + E L+ + V D Y+ ++ Y K + + + +
Sbjct: 144 IRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD------- 196
Query: 260 RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVG 318
R S Y + SL G++ +A+E M ++ + + Y+ LI + VG
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 319 EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA----DVKVCDCML 374
+LL E + R D Y LV +E L++ ++ + M + +V + +L
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 375 ---CAVVNGFSK--------RRGFSAAVRAY--------------------EKLISQGYE 403
C+ R+GFS +V + EK+ G +
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P ++Y +++ +C+ + ++A + E M +G +V Y++M+ + G++ +A+++
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+ ++ +GC P + YN++ID + + KL +EM+ + + PD ++Y+S++G S+
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 524 AGEFETCTELFNEYRINGGVIDRAMA--GIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
G+ + + F+E+ G+ A+ IM+G K Q D+ + L M G + ++
Sbjct: 497 EGKVDEAIKFFHEFE-RMGIRPNAVTFNSIMLG-LCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 582 RLYQSAWNAFIEAGLQLQA 600
Y G+ +A
Sbjct: 555 TSYTILIEGLAYEGMAKEA 573
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/470 (20%), Positives = 194/470 (41%), Gaps = 45/470 (9%)
Query: 122 PEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETL 181
P+ +IR R K + E + +PD T + +I + + A ++
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 182 LNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKL 241
L+ +V + + LR+ ++ + V +++ D Y+ ++EA +
Sbjct: 195 LDRMSVSPDVV--TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 242 DDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES 301
+KL E R Y VL + K GR+ EA+++ M G +
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDV----VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 302 SVYSTLIC-SFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV-EEDLLEKTLEVV 359
+ +I S S + + E+LL + R V ++I ++ + LL + ++++
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADML-RKGFSPSVVTFNILINFLCRKGLLGRAIDIL 367
Query: 360 EAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRL 419
E M + +++GF K + A+ E+++S+G P VTY +++ A C+
Sbjct: 368 EKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKD 427
Query: 420 SQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVY 479
+ A ++ ++ KG ++ Y+++I ++G+ A+KL+ +M+ + KP+ Y
Sbjct: 428 GKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Query: 480 NSLIDMHGREKNLRQLEKLWNEMKR----------------------------------- 504
+SL+ RE + + K ++E +R
Sbjct: 488 SSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMIN 547
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
R P++ SYT +I + G + EL NE N G++ ++ A + G
Sbjct: 548 RGCKPNETSYTILIEGLAYEGMAKEALELLNEL-CNKGLMKKSSAEQVAG 596
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 218/515 (42%), Gaps = 83/515 (16%)
Query: 121 RPEKSTLKHVIRYLMRFKKWD----FILSVSEDFKIYHVLPDGATCSKLIE--------- 167
+P+ S+ + V R L F D + SV+ + + H TC+ ++E
Sbjct: 79 KPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVHTT---ETCNYMLEALRVDGKLE 135
Query: 168 -----FCIRQRKF--KIAETLLNAFKSDS-----EVAVFA------FGSALR--NYNKL- 206
F + Q++ + T L FKS S + A +A FG L +YN L
Sbjct: 136 EMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLI 195
Query: 207 HMFRRTVLVFEKLKS-NSVVLDS-----RGYSHIMEAYSKLDDCESVVKLFHEFESRNLR 260
H+ ++ E ++ ++L+ + YS +M K D +SV+ L E E+ L+
Sbjct: 196 HLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLK 255
Query: 261 DSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGE 319
+ + + LG+ G+++EA E + M +G V Y+ LI + + K+
Sbjct: 256 PNV----YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 320 VEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVN 379
+E+ + K+ D Y+ L+ +
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLL-----------------------------------D 336
Query: 380 GFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDK 439
FS R + + + ++ G+ P VT+ +++A C+ + +A + M +G
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396
Query: 440 CVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW 499
+ Y+++I R RL +A++L M+ G KP + Y ID +G+ + + +
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKV 559
+MK + +AP+ V+ + + + +KAG ++F + G V D +M+ +SKV
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516
Query: 560 GQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
G+ID+ +KLL +M G D + S N +A
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKA 551
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 196/467 (41%), Gaps = 28/467 (5%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIR--QRKFKI 177
FRP T ++ L + + D ++ + ++ + + P+ T CIR R KI
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYT----FTICIRVLGRAGKI 274
Query: 178 AETLLNAFKSDSE------VAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGY 231
E + D E V AL KL + VFEK+K+ D Y
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKE---VFEKMKTGRHKPDRVTY 331
Query: 232 SHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFR 291
+++ +S D +SV + + E E +D + +L ++L K G EA +
Sbjct: 332 ITLLDRFSDNRDLDSVKQFWSEME----KDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 292 VMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEED 350
VM +GI + Y+TLIC +H++ + EL +S Y+ + Y +
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 351 LLEKTLEVVEAMKD----ADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQ 406
LE E MK ++ C+ L ++ R A + + L G P
Sbjct: 448 DSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDRE----AKQIFYGLKDIGLVPDS 503
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
VTY ++ Y ++ + ++A K+ EM + G + V+ +S+I ++ R+ A K+ +
Sbjct: 504 VTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMR 563
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
MKE KP V YN+L+ G+ +++ +L+ M ++ P+ +++ ++ K E
Sbjct: 564 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 623
Query: 527 FETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
++ + G V D ++ K GQ+ + + MK
Sbjct: 624 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 176/412 (42%), Gaps = 54/412 (13%)
Query: 141 DFILSVSEDFKIYHVLPDG-ATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSA 199
D +S SE + DG + +I + + A TL F D V
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ-----PK 784
Query: 200 LRNYNKL-------HMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFH 252
L YN L M VF ++KS + D Y+ +++AY K + + +L+
Sbjct: 785 LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYK 844
Query: 253 EFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALE-YFRVMTKKGIFESSVYSTLICSF 311
E + + + ++ L K G V +AL+ Y+ +M+ + +S C++
Sbjct: 845 EMSTHECEANT----ITHNIVISGLVKAGNVDDALDLYYDLMSDRD------FSPTACTY 894
Query: 312 ASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCD 371
L L EAK ++ E M D +
Sbjct: 895 GPLIDGLSKSGRLYEAK----------------------------QLFEGMLDYGCRPNC 926
Query: 372 CMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEE 431
+ ++NGF K AA +++++ +G P TY+ +++ C + + ++ F+E
Sbjct: 927 AIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKE 986
Query: 432 MEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK-ERGCKPNVWVYNSLIDMHGREK 490
+++ G + VV Y+ +I G+S RL A+ L +MK RG P+++ YNSLI G
Sbjct: 987 LKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1046
Query: 491 NLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG 542
+ + K++NE++R + P+ ++ ++I YS +G+ E ++ + + GG
Sbjct: 1047 MVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVY-QTMVTGG 1097
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 111/561 (19%), Positives = 217/561 (38%), Gaps = 74/561 (13%)
Query: 107 AFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLI 166
AFD ++D+ + P T +I L+R + D L + + + V P T I
Sbjct: 382 AFDTLDVMRDQGIL-PNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 167 EFCIRQRKFKIAETLLNAFKSDSEVA-VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVV 225
++ + A K+ + A ++L + K R +F LK +V
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 226 LDSRGYSHIMEAYSKLDDCESVVKLFHE--------------------FESRNLRDSKRY 265
DS Y+ +M+ YSK+ + + +KL E +++ + ++ +
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 266 LGQI-----------YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFAS 313
++ Y L LGK G++ EA+E F M +KG +++ ++TL
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 314 LHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCM 373
+V ++L + + D Y ++ V+ +++ + MK V
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVT 679
Query: 374 LCAVVNGFSK------------------------------------RRGFSAAVRAYEKL 397
LC ++ G K G AV E+L
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739
Query: 398 ISQGY-EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAYSSMIVMYGRSG 455
++ G G +I C+ + + A +FE+ + G + Y+ +I +
Sbjct: 740 VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
+ A + ++K GC P+V YN L+D +G+ + +L +L+ EM + + +++
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 516 SMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA-GIMVGVFSKVGQIDQLVKLLQDMKM 574
+I KAG + +L+ + + A G ++ SK G++ + +L + M
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 575 EGTRLDQRLYQSAWNAFIEAG 595
G R + +Y N F +AG
Sbjct: 920 YGCRPNCAIYNILINGFGKAG 940
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 2/217 (0%)
Query: 371 DCMLCAVVNGFSKRRGFSAAVRAYEKLISQ-GYEPGQVTYASVINAYCRLSQYNKAEKVF 429
D +L ++ K S A +EK G +P TY +I A+ VF
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF 808
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
+++ G V Y+ ++ YG+SG++ +L +M C+ N +N +I +
Sbjct: 809 LQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 490 KNLRQ-LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAM 548
N+ L+ ++ M R +P +Y +I SK+G +LF G + A+
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 549 AGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
I++ F K G+ D L + M EG R D + Y
Sbjct: 929 YNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%)
Query: 352 LEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYAS 411
LE+ V + M+ +K + S + G A A K+ G+ +Y
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 412 VINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG 471
+I+ + +A +V+ M +GF + YSS++V G+ + + M L+ +M+ G
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 472 CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
KPNV+ + I + GR + + ++ M PD V+YT +I A A + +
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 532 ELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
E+F + + DR ++ FS +D + + +M+ +G D + +A
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 592 IEAG 595
+AG
Sbjct: 374 CKAG 377
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 129/301 (42%), Gaps = 7/301 (2%)
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
Y+ LI + +++ + KS I D Y L+ Y + +++ E+ + M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS-QGYEPGQVTYASVINAYCRLSQ 421
+ + V++G K A+ Y L+S + + P TY +I+ + +
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
+A+++FE M G Y+ +I +G++G A L +M + G +P++ Y+
Sbjct: 907 LYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
L+D + + + E+K + PD V Y +I K+ E LFNE + +
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 542 GVI-DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
G+ D ++ G +++ K+ +++ G L+ ++ +NA I G L
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAG--LEPNVF--TFNALIR-GYSLSG 1081
Query: 601 K 601
K
Sbjct: 1082 K 1082
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 156/383 (40%), Gaps = 13/383 (3%)
Query: 107 AFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDF-KIYHVLPDGATCSKL 165
A + +RL + R S L +IRY + ++ E F K V P T + L
Sbjct: 732 AVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLL 791
Query: 166 IEFCIRQRKFKIAETLLNAFKSDS---EVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSN 222
I + +IA+ + KS +VA + F L Y K +++++ ++
Sbjct: 792 IGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNF--LLDAYGKSGKIDELFELYKEMSTH 849
Query: 223 SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFES-RNLRDSKRYLGQIYGVLCESLGKCG 281
++ ++ ++ K + + + L+++ S R+ + YG L + L K G
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT----ACTYGPLIDGLSKSG 905
Query: 282 RVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
R+ EA + F M G + ++Y+ LI F + L + D + Y
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKL-IS 399
LV +++ L + +K++ + ++NG K A+ + ++ S
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+G P TY S+I +A K++ E+++ G + V ++++I Y SG+ +
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 460 AMKLVAKMKERGCKPNVWVYNSL 482
A + M G PN Y L
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/354 (19%), Positives = 142/354 (40%), Gaps = 18/354 (5%)
Query: 73 NNIAGSHQQYS--------NPGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEK 124
NN++G+ + P N + GL + E+A D + ++K P+
Sbjct: 763 NNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE-ADMIEIAQDVFLQVKSTGCI-PDV 820
Query: 125 STLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNA 184
+T ++ + K D + + ++ + + T + +I ++ A L
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880
Query: 185 FKSDSEVAVFA--FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLD 242
SD + + A +G + +K +FE + + Y+ ++ + K
Sbjct: 881 LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940
Query: 243 DCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS 302
+ ++ LF R +++ R + Y VL + L GRV E L YF+ + + G+
Sbjct: 941 EADAACALFK----RMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV 996
Query: 303 V-YSTLICSFASLHKVGEVEELLREAK-SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVE 360
V Y+ +I H++ E L E K SR D Y L++ ++E+ ++
Sbjct: 997 VCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYN 1056
Query: 361 AMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVIN 414
++ A ++ A++ G+S A Y+ +++ G+ P TY + N
Sbjct: 1057 EIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 36/290 (12%)
Query: 352 LEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYAS 411
+ + LE+V+ M + K L +VNG S AV ++++ G++P +VTY
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 412 VINAYCRLSQ-----------------------------------YNKAEKVFEEMEQKG 436
V+N C+ Q + A +F EME KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
F ++ Y+++I + +GR + KL+ M +R PNV ++ LID +E LR+ +
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
+L EM +R +AP+ ++Y S+I + K E ++ + G D I++ +
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG-LQLQAKWLQE 605
K +ID ++L ++M + G + Y + F ++G L++ K QE
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQE 463
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 188/425 (44%), Gaps = 12/425 (2%)
Query: 182 LNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVL------DSRGYSHIM 235
L K+D V +F R + F R K K +VL +S+G +H +
Sbjct: 64 LVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSI 123
Query: 236 EAYSKLDDCESVV-KLFHEFES--RNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRV 292
S + +C KL + F + + ++ I+ L L RVSEALE
Sbjct: 124 YTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR 183
Query: 293 MTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV-YLKLVIMYVEED 350
M + G + + +TL+ KV + L+ + T + EV Y ++ + +
Sbjct: 184 MVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI-DRMVETGFQPNEVTYGPVLNVMCKSG 242
Query: 351 LLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYA 410
+E++ M++ ++K+ +++G K A + ++ +G++ +TY
Sbjct: 243 QTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 411 SVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER 470
++I +C +++ K+ +M ++ VV +S +I + + G+LR A +L+ +M +R
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 471 GCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETC 530
G PN YNSLID +E L + ++ + M + PD +++ +I Y KA +
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 531 TELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNA 590
ELF E + G + + +V F + G+++ KL Q+M R D Y+ +
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 591 FIEAG 595
+ G
Sbjct: 483 LCDNG 487
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 170/369 (46%), Gaps = 13/369 (3%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLCESLGKCGRVSEALEY 289
Y ++ K ++L + E RN++ D+ +Y ++ + L K G + A
Sbjct: 231 YGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY-----SIIIDGLCKDGSLDNAFNL 285
Query: 290 FRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV 347
F M KG F++ + Y+TLI F + + + +LLR+ R + + L+ +V
Sbjct: 286 FNEMEIKG-FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFV 344
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
+E L + ++++ M + ++++GF K A++ + +IS+G +P +
Sbjct: 345 KEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIM 404
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
T+ +IN YC+ ++ + ++F EM +G V Y++++ + +SG+L A KL +M
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
R +P++ Y L+D L + +++ ++++ K+ D Y +I A +
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
+ +LF + G +D IM+ + + + L + M EG D+ Y
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY--- 581
Query: 588 WNAFIEAGL 596
N I A L
Sbjct: 582 -NILIRAHL 589
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 173/389 (44%), Gaps = 47/389 (12%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ K++ ++ LD+ YS I++ K ++ LF+E E + + + G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ GR + + R M K+ I + V +S LI SF K+ E ++LL+E R
Sbjct: 310 NA----GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCA---VVNGFSKRRGFSAA 390
+ Y L+ + +E+ LE+ +++V+ M K CD + ++NG+ K
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMIS---KGCDPDIMTFNILINGYCKANRIDDG 422
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
+ + ++ +G VTY +++ +C+ + A+K+F+EM + +V+Y ++
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 451 YGRSGRLRNAMKLVAKMKE-----------------------------------RGCKPN 475
+G L A+++ K+++ +G K +
Sbjct: 483 LCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLD 542
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
YN +I R+ +L + + L+ +M APD+++Y +I A+ + T EL
Sbjct: 543 ARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIE 602
Query: 536 EYRINGGVIDRAMAGIMVGVFSKVGQIDQ 564
E + +G D + +++ + S G++D+
Sbjct: 603 EMKSSGFPADVSTVKMVINMLSS-GELDK 630
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 174/379 (45%), Gaps = 19/379 (5%)
Query: 198 SALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHE---F 254
S+ KLH +L +++ +V++S ++ KLD E +KLF E F
Sbjct: 146 SSFAEKGKLHFATALLLQSFEVEGCCMVVNS-----LLNTLVKLDRVEDAMKLFDEHLRF 200
Query: 255 ESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFAS 313
+S N D+K + +L L G+ +ALE VM+ G V Y+TLI F
Sbjct: 201 QSCN--DTK-----TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
Query: 314 LHKVGEVEELLREAKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCD 371
+++ + E+ ++ KS + + P+V Y ++ Y + + + +++ M + +
Sbjct: 254 SNELNKASEMFKDVKSGS-VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312
Query: 372 CMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEE 431
+V+G++K A K+IS G P VT+ S+I+ YCR+ Q ++ +++EE
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 432 MEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKN 491
M +G YS +I RL A +L+ ++ + P ++YN +ID +
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 492 LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI 551
+ + + EM+++K PDK+++T +I + G +F++ G D+
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 552 MVGVFSKVGQIDQLVKLLQ 570
++ K G + L Q
Sbjct: 493 LLSCLLKAGMAKEAYHLNQ 511
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 125/280 (44%), Gaps = 1/280 (0%)
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
V ++L+ + L +V + +L E D + + L+ EK LE++ M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGY-EPGQVTYASVINAYCRLSQ 421
+ ++ GF K + A ++ + S P VTY S+I+ YC+ +
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
+A + ++M + G V ++ ++ Y ++G + A ++ KM GC P+V + S
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
LID + R + Q +LW EM R + P+ +Y+ +I A EL +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
+ M ++ F K G++++ ++++M+ + + D+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 160/368 (43%), Gaps = 18/368 (4%)
Query: 236 EAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK 295
E KLD+ + F EF L + R+ Y +L SL K G A + F M
Sbjct: 74 EVVKKLDNNPHIGFRFWEFSRFKL--NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKS 131
Query: 296 KGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
G+ ++ + L+ SFA K+ LL ++ EV +++ + L K
Sbjct: 132 DGVSPNNRLLGFLVSSFAEKGKLHFATALL--------LQSFEVEGCCMVVNSLLNTLVK 183
Query: 355 TLEVVEAMK--DADVKVCDCMLCAVVNGFSKRR-GFSAAVRAYEKL-ISQGY--EPGQVT 408
V +AMK D ++ C N + G A +A E L + G+ EP VT
Sbjct: 184 LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVT 243
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGF-DKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
Y ++I +C+ ++ NKA ++F++++ VV Y+SMI Y ++G++R A L+ M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
G P +N L+D + + + E++ +M PD V++TS+I Y + G+
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
L+ E G + I++ ++ + +LL + + +Y
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 588 WNAFIEAG 595
+ F +AG
Sbjct: 424 IDGFCKAG 431
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 174/379 (45%), Gaps = 19/379 (5%)
Query: 198 SALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHE---F 254
S+ KLH +L +++ +V++S ++ KLD E +KLF E F
Sbjct: 146 SSFAEKGKLHFATALLLQSFEVEGCCMVVNS-----LLNTLVKLDRVEDAMKLFDEHLRF 200
Query: 255 ESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFAS 313
+S N D+K + +L L G+ +ALE VM+ G V Y+TLI F
Sbjct: 201 QSCN--DTK-----TFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCK 253
Query: 314 LHKVGEVEELLREAKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCD 371
+++ + E+ ++ KS + + P+V Y ++ Y + + + +++ M + +
Sbjct: 254 SNELNKASEMFKDVKSGS-VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTN 312
Query: 372 CMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEE 431
+V+G++K A K+IS G P VT+ S+I+ YCR+ Q ++ +++EE
Sbjct: 313 VTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Query: 432 MEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKN 491
M +G YS +I RL A +L+ ++ + P ++YN +ID +
Sbjct: 373 MNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGK 432
Query: 492 LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI 551
+ + + EM+++K PDK+++T +I + G +F++ G D+
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 552 MVGVFSKVGQIDQLVKLLQ 570
++ K G + L Q
Sbjct: 493 LLSCLLKAGMAKEAYHLNQ 511
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 125/280 (44%), Gaps = 1/280 (0%)
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
V ++L+ + L +V + +L E D + + L+ EK LE++ M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGY-EPGQVTYASVINAYCRLSQ 421
+ ++ GF K + A ++ + S P VTY S+I+ YC+ +
Sbjct: 233 SGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGK 292
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
+A + ++M + G V ++ ++ Y ++G + A ++ KM GC P+V + S
Sbjct: 293 MREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTS 352
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
LID + R + Q +LW EM R + P+ +Y+ +I A EL +
Sbjct: 353 LIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKD 412
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
+ M ++ F K G++++ ++++M+ + + D+
Sbjct: 413 IIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 160/368 (43%), Gaps = 18/368 (4%)
Query: 236 EAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK 295
E KLD+ + F EF L + R+ Y +L SL K G A + F M
Sbjct: 74 EVVKKLDNNPHIGFRFWEFSRFKL--NIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKS 131
Query: 296 KGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
G+ ++ + L+ SFA K+ LL ++ EV +++ + L K
Sbjct: 132 DGVSPNNRLLGFLVSSFAEKGKLHFATALL--------LQSFEVEGCCMVVNSLLNTLVK 183
Query: 355 TLEVVEAMK--DADVKVCDCMLCAVVNGFSKRR-GFSAAVRAYEKL-ISQGY--EPGQVT 408
V +AMK D ++ C N + G A +A E L + G+ EP VT
Sbjct: 184 LDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVT 243
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGF-DKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
Y ++I +C+ ++ NKA ++F++++ VV Y+SMI Y ++G++R A L+ M
Sbjct: 244 YNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDM 303
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
G P +N L+D + + + E++ +M PD V++TS+I Y + G+
Sbjct: 304 LRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQV 363
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
L+ E G + I++ ++ + +LL + + +Y
Sbjct: 364 SQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPV 423
Query: 588 WNAFIEAG 595
+ F +AG
Sbjct: 424 IDGFCKAG 431
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 152/331 (45%), Gaps = 5/331 (1%)
Query: 268 QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGE---VEELL 324
+Y +L + G + ++LE FR+M G F SVY T S+ K GE V L
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYG-FNPSVY-TCNAILGSVVKSGEDVSVWSFL 221
Query: 325 REAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKR 384
+E R D + L+ + E EK+ +++ M+ + V++ + K+
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281
Query: 385 RGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAY 444
F AA+ + + S+G + TY +I+ CR ++ K + +M ++ V Y
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341
Query: 445 SSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
+++I + G++ A +L+ +M G PN +N+LID H E N ++ K++ M+
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQ 564
+ + P +VSY ++ K EF+ + + NG + R M+ K G +D+
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461
Query: 565 LVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
V LL +M +G D Y + N F + G
Sbjct: 462 AVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 176/423 (41%), Gaps = 40/423 (9%)
Query: 209 FRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQ 268
F ++ + +K++ + Y+ ++ Y K ++ ++L +S+ +
Sbjct: 249 FEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADV----C 304
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREA 327
Y +L L + R+++ R M K+ I + V Y+TLI F++ KV +LL E
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 364
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
S + + L+ ++ E ++ L++ M+ + + +++G K F
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A Y ++ G G++TY +I+ C+ ++A + EM + G D +V YS++
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM----- 502
I + + GR + A ++V ++ G PN +Y++LI R L++ +++ M
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544
Query: 503 ---------------KRRKVA---------------PDKVSYTSMIGAYSKAGEFETCTE 532
K KVA P+ VS+ +I Y +GE
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
+F+E G G ++ K G + + K L+ + +D +Y + A
Sbjct: 605 VFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMC 664
Query: 593 EAG 595
++G
Sbjct: 665 KSG 667
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 166/423 (39%), Gaps = 21/423 (4%)
Query: 149 DFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKL-- 206
D + + P+ T + LI + K IA LLN E+ F +N L
Sbjct: 328 DMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLN------EMLSFGLSPNHVTFNALID 381
Query: 207 -HM----FRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRD 261
H+ F+ + +F +++ + Y +++ K + L F R R+
Sbjct: 382 GHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCK----NAEFDLARGFYMRMKRN 437
Query: 262 SKRYLGQI-YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGE 319
+G+I Y + + L K G + EA+ M+K GI V YS LI F + +
Sbjct: 438 GV-CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 496
Query: 320 VEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVN 379
+E++ + +Y L+ L++ + + EAM +V
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Query: 380 GFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDK 439
K + A + S G P V++ +IN Y + KA VF+EM + G
Sbjct: 557 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Query: 440 CVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW 499
Y S++ + G LR A K + + + +YN+L+ + NL + L+
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVI-DRAMAGIMVGVFSK 558
EM +R + PD +YTS+I + G+ E G V+ ++ M V K
Sbjct: 677 GEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFK 736
Query: 559 VGQ 561
GQ
Sbjct: 737 AGQ 739
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/446 (19%), Positives = 175/446 (39%), Gaps = 16/446 (3%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVLV 215
P T + ++ + ++ +FK A LL+ KS + V + + + + + + L+
Sbjct: 266 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 325
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSK-RYLGQIYGVLC 274
++ + + Y+ ++ +S +L +E S L + + I G +
Sbjct: 326 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 385
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
E G EAL+ F +M KG+ S V Y L+ L K E + L R R K
Sbjct: 386 E-----GNFKEALKMFYMMEAKGLTPSEVSYGVLL---DGLCKNAEFD-LARGFYMRMKR 436
Query: 334 KDPEV----YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
V Y ++ + L++ + ++ M + A++NGF K F
Sbjct: 437 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 496
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
A ++ G P + Y+++I CR+ +A +++E M +G + ++ ++
Sbjct: 497 AKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVT 556
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
++G++ A + + M G PN ++ LI+ +G + +++EM + P
Sbjct: 557 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHP 616
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
+Y S++ K G + +D M ++ K G + + V L
Sbjct: 617 TFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLF 676
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAG 595
+M D Y S + G
Sbjct: 677 GEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 140/349 (40%), Gaps = 37/349 (10%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFAS-------------LH 315
+ VL SL K G+V+EA E+ R MT GI ++V + LI + + +
Sbjct: 551 FNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMT 610
Query: 316 KVG----------------------EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLE 353
KVG E E+ L+ + D +Y L+ + L
Sbjct: 611 KVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Query: 354 KTLEVVEAMKDADVKVCDCMLCAVVNGFSKR-RGFSAAVRAYEKLISQGYEPGQVTYASV 412
K + + M + ++++G ++ + A + A E P +V Y
Sbjct: 671 KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCF 730
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
++ + Q+ E+M+ G +V ++MI Y R G++ L+ +M +
Sbjct: 731 VDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNG 790
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
PN+ YN L+ + + K++ L+ + + PDK++ S++ ++ E +
Sbjct: 791 GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLK 850
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
+ + G +DR +++ G+I+ L++ M G LD+
Sbjct: 851 ILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 899
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 154/384 (40%), Gaps = 12/384 (3%)
Query: 194 FAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHE 253
F +GS L+ K R + L + +D+ Y+ ++ A K + V LF E
Sbjct: 619 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGE 678
Query: 254 FESRN-LRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKG-IFESSVYSTLICSF 311
R+ L DS Y I G LC G+ A+ + + +G + + V T C
Sbjct: 679 MVQRSILPDSYTYTSLISG-LCRK----GKTVIAILFAKEAEARGNVLPNKVMYT--CFV 731
Query: 312 ASLHKVGEVEELL---REAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK 368
+ K G+ + + + + D ++ Y +EKT +++ M + +
Sbjct: 732 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGG 791
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
+++G+SKR+ S + Y +I G P ++T S++ C + K+
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR 488
+ +G + ++ +I +G + A LV M G + ++++ + R
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 489 EKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAM 548
++ + +EM ++ ++P+ Y +I + G+ +T + E +
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 549 AGIMVGVFSKVGQIDQLVKLLQDM 572
MV +K G+ D+ LL+ M
Sbjct: 972 ESAMVRALAKCGKADEATLLLRFM 995
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%)
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
Y +I Y R + ++F M GF+ V ++++ +SG + + +M
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
+R P+V +N LI++ E + + L +M++ AP V+Y +++ Y K G F
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
+ EL + + G D +++ + +I + LL+DM+ ++ Y +
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344
Query: 588 WNAFIEAGLQLQAKWL 603
N F G L A L
Sbjct: 345 INGFSNEGKVLIASQL 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 153/396 (38%), Gaps = 19/396 (4%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFA----FGSALRNYNKLHMFR 210
+LPD T + LI R+ K IA +L A ++++ V + + K ++
Sbjct: 684 ILPDSYTYTSLISGLCRKGKTVIA--ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWK 741
Query: 211 RTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIY 270
+ E++ + D + +++ YS++ E L E ++N + Y
Sbjct: 742 AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNL----TTY 797
Query: 271 GVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYS-TLICSFASLHKVGEVEELLREAKS 329
+L K VS + +R + GI + +L+ + + ++L+
Sbjct: 798 NILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFIC 857
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKV----CDCMLCAVVNGFSKRR 385
R D + L+ + ++V+ M + + CD A+V+ ++
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCD----AMVSVLNRNH 913
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
F + ++ QG P Y +IN CR+ A V EEM VA S
Sbjct: 914 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 973
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
+M+ + G+ A L+ M + P + + +L+ + + N+ + +L M
Sbjct: 974 AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 1033
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
+ D VSY +I G+ EL+ E + +G
Sbjct: 1034 GLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDG 1069
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 111/504 (22%), Positives = 209/504 (41%), Gaps = 43/504 (8%)
Query: 114 LKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQR 173
+K RP+ P ++ + + KK+D ++S+ E + + + T + LI R+
Sbjct: 77 VKSRPL--PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 134
Query: 174 KFKIAETLLN-AFKSDSEVAVFAFGSALRNY--------------NKLHM-FRRTVLVFE 217
+ +A LL K E ++ S L Y + M +R + F
Sbjct: 135 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 194
Query: 218 KL---------KSNSVVLDSR-----------GYSHIMEAYSKLDDCESVVKLFHEFESR 257
L S +V L R Y ++ K D + L ++ E+
Sbjct: 195 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 254
Query: 258 NLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHK 316
+ + IY + +SL K +AL F M KG+ + + YS+LI + +
Sbjct: 255 KIEANV----VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 317 VGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCA 376
+ LL + R + + L+ +V+E L + ++ + M + +
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++NGF A +E +IS+ P VTY ++IN +C+ + ++ ++F EM Q+G
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
V Y+++I + ++ NA + +M G PN+ YN+L+D + L +
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
++ ++R K+ P +Y MI KAG+ E +LF + G D + M+ F
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLD 580
+ G ++ L + M+ +G D
Sbjct: 551 CRKGLKEEADALFRKMREDGPLPD 574
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 5/328 (1%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREA 327
Y +L + ++S AL M K G +E S+ S+L+ + ++ + L+ +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
D + L+ + + + +V+ M + VVNG KR
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A K+ + E V Y++VI++ C+ + A +F EME KG V+ YSS+
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I R +A +L++ M ER PNV +N+LID +E L + EKL++EM +R +
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA-GIMVGVFSKVGQIDQLV 566
PD +Y+S+I + + +F E I+ + ++ F K +ID+ V
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYNTLINGFCKAKRIDEGV 420
Query: 567 KLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
+L ++M G + Y + + F +A
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQA 448
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/411 (19%), Positives = 175/411 (42%), Gaps = 5/411 (1%)
Query: 186 KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCE 245
KS ++F F L K+ F + + EK++ + + Y+ ++ + +
Sbjct: 78 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 137
Query: 246 SVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-Y 304
+ L + S L + C GK R+S+A+ M + G ++ +
Sbjct: 138 LALALLGKMMKLGYEPSIVTLSSLLNGYCH--GK--RISDAVALVDQMVEMGYRPDTITF 193
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD 364
+TLI +K E L+ R + Y +V + ++ ++ M+
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Query: 365 ADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNK 424
A ++ + V++ K R A+ + ++ ++G P +TY+S+I+ C +++
Sbjct: 254 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD 313
Query: 425 AEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
A ++ +M ++ + VV ++++I + + G+L A KL +M +R P+++ Y+SLI+
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 485 MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVI 544
L + + ++ M + P+ V+Y ++I + KA + ELF E G V
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 545 DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ ++ F + D + + M +G + Y + + + G
Sbjct: 434 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 190/425 (44%), Gaps = 40/425 (9%)
Query: 186 KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCE 245
KS + V F + Y + ++ ++ +L + V Y+ +++AY E
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 246 SVVKLFHEFESRNLRDSKRYLG-QIYGVLCESLGK-CGRVSEALEYFRVMTKKGIFESS- 302
+ E ++ ++ S + +G +Y E L K G EA++ F+ M + ++
Sbjct: 230 RAEVVLVEMQNHHV--SPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
Y+ +I + K +L E +S + Y LV + E L EK E+ E +
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
++ ++ + A++ +S+ A + + G EP + +Y +++AY R +
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 423 NKAEKVFEEMEQKGF--------------------DKC---------------VVAYSSM 447
+ AE VFEEM++ G KC +SM
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
+ +YGR G+ K++A+M+ C ++ YN LI+++G+ L ++E+L+ E+K +
Sbjct: 468 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
PD V++TS IGAYS+ + C E+F E +G D A +++ S Q++Q+
Sbjct: 528 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 587
Query: 568 LLQDM 572
+L+ M
Sbjct: 588 VLRTM 592
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 123/244 (50%)
Query: 353 EKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASV 412
E+ ++V + MK K ++N + K + + Y ++ S +P TY ++
Sbjct: 268 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 327
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
+NA+ R KAE++FE++++ G + V Y++++ Y R+G A ++ + M+ GC
Sbjct: 328 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 387
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
+P+ YN ++D +GR E ++ EMKR +AP S+ ++ AYSKA + C
Sbjct: 388 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 447
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
+ E NG D + M+ ++ ++GQ ++ K+L +M+ D Y N +
Sbjct: 448 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 507
Query: 593 EAGL 596
+AG
Sbjct: 508 KAGF 511
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%)
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
M+ K C A+VN F++ A +E+L G EP Y +++ +Y R
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
A ++F M+ G + +Y+ M+ YGR+G +A + +MK G P + +
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 431
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
L+ + + +++ + E + EM V PD SM+ Y + G+F ++ E
Sbjct: 432 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 491
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
D + I++ ++ K G ++++ +L ++K + R D + S A+
Sbjct: 492 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 541
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+++ + ++ + A Y +L+ Y P + TYA +I AYC +AE V EM+
Sbjct: 183 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHH 242
Query: 437 FDK---CVVAYSSMI-VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL 492
V Y++ I + R G A+ + +MK CKP YN +I+++G+
Sbjct: 243 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 302
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
KL+ EM+ + P+ +YT+++ A+++ G E E+F + + +G D + +
Sbjct: 303 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 362
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
+ +S+ G ++ M+ G D+ Y +A+ AGL A+
Sbjct: 363 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 121/277 (43%), Gaps = 9/277 (3%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y+ ++ A+++ CE ++F + + L +Y L ES + G A E F
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV----YVYNALMESYSRAGYPYGAAEIF 379
Query: 291 RVMTKKGI-FESSVYSTLICSF--ASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV 347
+M G + + Y+ ++ ++ A LH + E + E K + ++ L+ Y
Sbjct: 380 SLMQHMGCEPDRASYNIMVDAYGRAGLHS--DAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
+ + K +V+ M + V+ +L +++N + + F+ + ++ +
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
TY +IN Y + + E++F E+++K F VV ++S I Y R +++ +M
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
+ GC P+ L+ E+ + Q+ + M +
Sbjct: 558 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 108/220 (49%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+++NGF A+ +++ G +P V Y ++I++ C+ N A +F++ME
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G VV Y+S++ SGR R+A L+ M +R KP+V +N+LID +E
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
E+L+NEM R +AP+ +YTS+I + G + ++F G D ++
Sbjct: 267 EELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLING 326
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
F K ++D +K+ +M +G + Y + F + G
Sbjct: 327 FCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/504 (21%), Positives = 213/504 (42%), Gaps = 49/504 (9%)
Query: 107 AFDYYQRL-KDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKL 165
A D + + + RP+ P ++ + + KK+D ++++ + +I V D TC+ L
Sbjct: 56 ALDLFTHMVESRPL--PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 166 IE-FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSV 224
+ FC + + + L K E + F S + + + + + ++ +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLCESLGKCGRV 283
D Y+ I+++ K + LF + E+ +R D Y + G LC S GR
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG-LCNS----GRW 228
Query: 284 SEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKL 342
+A R MTK+ I + ++ LI +F K + EEL Y ++
Sbjct: 229 RDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL---------------YNEM 273
Query: 343 VIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGY 402
+ M + ++ T +++NGF A + + + ++G
Sbjct: 274 IRMSIAPNIFTYT--------------------SLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 403 EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMK 462
P V Y S+IN +C+ + + A K+F EM QKG + Y+++I +G+ G+ A +
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 463 LVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK---VAPDKVSYTSMIG 519
+ + M RG PN+ YN L+ +++ ++ +M++R+ VAP+ +Y ++
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
G+ E +F + R I I++ K G++ V L + +G +
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 580 DQRLYQSAWNAFIEAGLQLQAKWL 603
+ Y + + GL+ +A L
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVL 517
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/417 (18%), Positives = 180/417 (43%), Gaps = 33/417 (7%)
Query: 163 SKLIEFCIRQRKF----KIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEK 218
S+L++ R F +I L++ + + + +F R + F + + V K
Sbjct: 25 SRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAK 84
Query: 219 LKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLG 278
+K VV++ + IM L C ++ F + S+ YL + LG
Sbjct: 85 MKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCF-------CQSSQPYLASSF------LG 131
Query: 279 KCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
K M K G FE + +++LI F +++ E ++ + D
Sbjct: 132 K-------------MMKLG-FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEK 396
+Y ++ + + L + + M++ ++ M ++VNG + A
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
+ + +P +T+ ++I+A+ + ++ AE+++ EM + + Y+S+I + G
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
+ A ++ M+ +GC P+V Y SLI+ + K + K++ EM ++ + + ++YT+
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 517 MIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
+I + + G+ E+F+ G + +++ G++ + + + +DM+
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 164/391 (41%), Gaps = 40/391 (10%)
Query: 121 RPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAET 180
+P+ +I L + ++ LS+ + + Y + PD + L+ +++ A++
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 181 LLNAF-KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYS 239
LL K + V F + + + K F ++ ++ S+ + Y+ ++ +
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 240 KLDDCESVVKLFHEFESRN-LRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI 298
+ ++F+ E++ D Y I G C KC +V +A++ F M++KG+
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLING-FC----KCKKVDDAMKIFYEMSQKGL 348
Query: 299 FESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE 357
+++ Y+TLI F + K +E+ SR + Y L+ ++K L
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 358 VVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC 417
+ E M+ ++ G P TY +++ C
Sbjct: 409 IFEDMQKREM--------------------------------DGVAPNIWTYNVLLHGLC 436
Query: 418 RLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVW 477
+ KA VFE+M ++ D ++ Y+ +I ++G+++NA+ L + +G KPNV
Sbjct: 437 YNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVV 496
Query: 478 VYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
Y ++I RE + L+ +MK V+
Sbjct: 497 TYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 93/217 (42%)
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
F+ A+ + ++ P + + ++N ++ +++ + + ++ G + +
Sbjct: 53 FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNL 112
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
++ + +S + A + KM + G +P++ + SLI+ + + + N+M
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
+ PD V YT++I + K G LF++ G D M +V G+
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232
Query: 567 KLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
LL+ M + D + + +AF++ G L A+ L
Sbjct: 233 SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEEL 269
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/502 (20%), Positives = 213/502 (42%), Gaps = 59/502 (11%)
Query: 105 ELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRF-KKWDFILSVSEDFKIYHVLPDGATCS 163
E A D ++R+K+ P T ++ + + W IL V ++ + + D TCS
Sbjct: 227 EKAIDLFERMKEMGP-SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCS 285
Query: 164 KLIEFCIRQRKFKIAETLLNAFKS-DSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSN 222
++ C R+ + A+ KS E + + L+ + K ++ + V ++++ N
Sbjct: 286 TVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEEN 345
Query: 223 SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGR 282
S DS Y+ ++ AY + G
Sbjct: 346 SCPADSVTYNELVAAYVR---------------------------------------AGF 366
Query: 283 VSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
EA +MTKKG+ +++ Y+T+I ++ K E +L K + + Y
Sbjct: 367 SKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNA 426
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVC-------DCMLCAVVNGFSKRRGFSAAV-RA 393
++ + ++ ++ E+++ + D C + ML N +G V R
Sbjct: 427 VLSLLGKKS---RSNEMIKMLCDMKSNGCSPNRATWNTMLALCGN-----KGMDKFVNRV 478
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+ ++ S G+EP + T+ ++I+AY R A K++ EM + GF+ CV Y++++ R
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
G R+ +++ MK +G KP Y+ ++ + + N +E++ N +K ++ P +
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
+++ A K F ++ +G D + M+ +F++ DQ +L+ ++
Sbjct: 599 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 574 MEGTRLDQRLYQSAWNAFIEAG 595
+G D Y S + ++ G
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRG 680
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 177/388 (45%), Gaps = 16/388 (4%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ +K+ +LD R Y+ I+ AYS+ E + LF + + S + Y V+
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERM--KEMGPSPTLV--TYNVIL 252
Query: 275 ESLGKCGRV-SEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTK 332
+ GK GR + L M KG+ F+ ST++ + A + E +E E KS
Sbjct: 253 DVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGY 312
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVN-GFSKRRGF 387
Y L+ ++ + + + L V++ M++ AD + ++ A V GFSK
Sbjct: 313 EPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE--- 369
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A E + +G P +TY +VI+AY + + ++A K+F M++ G Y+++
Sbjct: 370 --AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
+ + G+ R +K++ MK GC PN +N+++ + G + + + +++ EMK
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGF 487
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
PD+ ++ ++I AY + G ++++ E G ++ ++ G
Sbjct: 488 EPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGEN 547
Query: 568 LLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
++ DMK +G + + Y + + G
Sbjct: 548 VISDMKSKGFKPTETSYSLMLQCYAKGG 575
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 2/248 (0%)
Query: 354 KTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF-SAAVRAYEKLISQGYEPGQVTYASV 412
K L V++ M+ +K D C+ V R G A + +L S GYEPG VTY ++
Sbjct: 264 KILGVLDEMRSKGLKF-DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
+ + + Y +A V +EME+ V Y+ ++ Y R+G + A ++ M ++G
Sbjct: 323 LQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV 382
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
PN Y ++ID +G+ + KL+ MK P+ +Y +++ K +
Sbjct: 383 MPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
+ + + NG +RA M+ + G + ++ ++MK G D+ + + +A+
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 593 EAGLQLQA 600
G ++ A
Sbjct: 503 RCGSEVDA 510
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 134/284 (47%), Gaps = 9/284 (3%)
Query: 247 VVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV--Y 304
V ++F E +S + + L + G+CG +A + + MT+ G F + V Y
Sbjct: 475 VNRVFREMKSCGFEPDR----DTFNTLISAYGRCGSEVDASKMYGEMTRAG-FNACVTTY 529
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEA-MK 363
+ L+ + A E ++ + KS+ K E L++ + +E +E +K
Sbjct: 530 NALLNALARKGDWRSGENVISDMKSK-GFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYN 423
+ + +L ++ K R + + RA+ GY+P V + S+++ + R + Y+
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 424 KAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
+AE + E + + G +V Y+S++ MY R G A +++ +++ KP++ YN++I
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
R +++ ++ +EM R + P +Y + + Y+ G F
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 191/425 (44%), Gaps = 40/425 (9%)
Query: 186 KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCE 245
KS + V F + Y + ++ ++ +L + V Y+ +++AY E
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 246 SVVKLFHEFESRNLRDSKRYLG-QIYGVLCESLGK-CGRVSEALEYFRVMTKKGIFESS- 302
+ E ++ ++ S + +G +Y E L K G EA++ F+ M + ++
Sbjct: 208 RAEVVLVEMQNHHV--SPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
Y+ +I + K +L E +S + Y LV + E L EK E+ E +
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
++ ++ + A++ +S+ A + + G EP + +Y +++AY R +
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 423 NKAEKVFEEMEQKGFDKC-------VVAYS----------------------------SM 447
+ AE VFEEM++ G + AYS SM
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
+ +YGR G+ K++A+M+ C ++ YN LI+++G+ L ++E+L+ E+K +
Sbjct: 446 LNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
PD V++TS IGAYS+ + C E+F E +G D A +++ S Q++Q+
Sbjct: 506 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTS 565
Query: 568 LLQDM 572
+L+ M
Sbjct: 566 VLRTM 570
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 123/244 (50%)
Query: 353 EKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASV 412
E+ ++V + MK K ++N + K + + Y ++ S +P TY ++
Sbjct: 246 EEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTAL 305
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
+NA+ R KAE++FE++++ G + V Y++++ Y R+G A ++ + M+ GC
Sbjct: 306 VNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGC 365
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
+P+ YN ++D +GR E ++ EMKR +AP S+ ++ AYSKA + C
Sbjct: 366 EPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEA 425
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
+ E NG D + M+ ++ ++GQ ++ K+L +M+ D Y N +
Sbjct: 426 IVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYG 485
Query: 593 EAGL 596
+AG
Sbjct: 486 KAGF 489
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%)
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
M+ K C A+VN F++ A +E+L G EP Y +++ +Y R
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
A ++F M+ G + +Y+ M+ YGR+G +A + +MK G P + +
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHML 409
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
L+ + + +++ + E + EM V PD SM+ Y + G+F ++ E
Sbjct: 410 LLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGP 469
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
D + I++ ++ K G ++++ +L ++K + R D + S A+
Sbjct: 470 CTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAY 519
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+++ + ++ + A Y +L+ Y P + TYA +I AYC +AE V EM+
Sbjct: 161 LIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHH 220
Query: 437 FDK---CVVAYSSMI-VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL 492
V Y++ I + R G A+ + +MK CKP YN +I+++G+
Sbjct: 221 VSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKS 280
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
KL+ EM+ + P+ +YT+++ A+++ G E E+F + + +G D + +
Sbjct: 281 YMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNAL 340
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
+ +S+ G ++ M+ G D+ Y +A+ AGL A+
Sbjct: 341 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/277 (20%), Positives = 121/277 (43%), Gaps = 9/277 (3%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y+ ++ A+++ CE ++F + + L +Y L ES + G A E F
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDV----YVYNALMESYSRAGYPYGAAEIF 357
Query: 291 RVMTKKGI-FESSVYSTLICSF--ASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV 347
+M G + + Y+ ++ ++ A LH + E + E K + ++ L+ Y
Sbjct: 358 SLMQHMGCEPDRASYNIMVDAYGRAGLHS--DAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
+ + K +V+ M + V+ +L +++N + + F+ + ++ +
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 475
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
TY +IN Y + + E++F E+++K F VV ++S I Y R +++ +M
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
+ GC P+ L+ E+ + Q+ + M +
Sbjct: 536 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%)
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
L +++NGF + F AV + + G+ P V Y +VIN C+ N A +VF ME
Sbjct: 152 LGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCME 211
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+KG V Y+++I SGR +A +L+ M +R PNV + +LID +E NL
Sbjct: 212 KKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLL 271
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+ L+ EM RR V P+ +Y S+I + G +F+ G D ++
Sbjct: 272 EARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLI 331
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
F K +++ +KL +M +G D Y + + + +AG
Sbjct: 332 TGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 144/336 (42%), Gaps = 36/336 (10%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREA 327
IY + L K ++ ALE F M KKGI +V Y+TLI ++ + + LLR+
Sbjct: 186 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
R KI DP V A+++ F K
Sbjct: 246 VKR-KI-DPNVIF---------------------------------FTALIDTFVKEGNL 270
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A Y+++I + P TY S+IN +C A+ +F+ M KG VV Y+++
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 330
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I + +S R+ + MKL +M +G + + YN+LI + + L +K++N M V
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
+PD V+Y ++ G+ E + + + + +D I++ + ++ +
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 450
Query: 568 LLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
L + + +G + D Y + + GLQ +A L
Sbjct: 451 LFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 1/207 (0%)
Query: 281 GRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
G + +A F +M KG F V Y+TLI F +V + +L E + + D Y
Sbjct: 303 GCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
L+ Y + L +V M D V +++ A+ E L
Sbjct: 363 NTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQK 422
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+ +TY +I CR + +A +F + +KG +AY +MI R G R
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMH 486
A KL +MKE G P+ +Y+ + H
Sbjct: 483 ADKLCRRMKEDGFMPSERIYDETLRDH 509
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/404 (19%), Positives = 180/404 (44%), Gaps = 17/404 (4%)
Query: 188 DSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESV 247
D+ +A++ + + Y + ++ ++VF++LK Y ++ Y+K+
Sbjct: 446 DAPIAIYH--TMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKA 503
Query: 248 VKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YST 306
+++ + ++ + + Y ++ K + A F M K+G+ + Y+
Sbjct: 504 LEVSRVMKEEGVKHNLK----TYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNN 559
Query: 307 LICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDAD 366
+I +F + + + ++E + ++ ++ Y + + ++LEV + M+
Sbjct: 560 IISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRR-- 617
Query: 367 VKVCDCM-----LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
C C+ ++NG ++R AV +++ G + TY ++ Y +
Sbjct: 618 ---CGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGD 674
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
KA + F ++ +G D + Y +++ +SGR+++A+ + +M R N +VYN
Sbjct: 675 TGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNI 734
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
LID R ++ + L +MK+ V PD +YTS I A SKAG+ T+ E G
Sbjct: 735 LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
+ ++ +++ ++ + ++MK G + D+ +Y
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/419 (21%), Positives = 182/419 (43%), Gaps = 42/419 (10%)
Query: 179 ETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAY 238
+ +++AF+ S+ + FG ++ Y + R FE++++ + SR Y+ ++ AY
Sbjct: 295 QAVISAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY 354
Query: 239 SKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI 298
+ D + EAL R M ++GI
Sbjct: 355 AVGRD---------------------------------------MDEALSCVRKMKEEGI 375
Query: 299 FESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE 357
S V YS ++ F+ + EAK K + +Y K++ + + +E+
Sbjct: 376 EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEA 435
Query: 358 VVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC 417
+V M++ + + +++G++ + +++L G+ P VTY +IN Y
Sbjct: 436 LVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYT 495
Query: 418 RLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVW 477
++ + +KA +V M+++G + YS MI + + NA + M + G KP+V
Sbjct: 496 KVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVI 555
Query: 478 VYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEY 537
+YN++I N+ + + EM++ + P ++ +I Y+K+G+ E+F+
Sbjct: 556 LYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMM 615
Query: 538 RINGGVID-RAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
R G V G++ G+ K Q+++ V++L +M + G ++ Y + G
Sbjct: 616 RRCGCVPTVHTFNGLINGLVEKR-QMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 141/346 (40%), Gaps = 17/346 (4%)
Query: 200 LRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNL 259
+ + KL + VFE + + D Y++I+ A+ + + + ++ E +
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 260 RDSKR-YLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKV 317
R + R ++ I+G K G + +LE F +M + G + ++ LI ++
Sbjct: 586 RPTTRTFMPIIHG-----YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
+ E+L E + Y K++ Y K E +++ + V A+
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+ K +A+ +++ ++ Y +I+ + R +A + ++M+++G
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
+ Y+S I ++G + A + + +M+ G KPN+ Y +LI R +
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 498 LWNEMKRRKVAPDKVSY----------TSMIGAYSKAGEFETCTEL 533
+ EMK + PDK Y S+ AY +G C E+
Sbjct: 821 CYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICKEM 866
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 189/439 (43%), Gaps = 3/439 (0%)
Query: 160 ATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAV-FAFGSALRNYNKLHMFRRTVLVFEK 218
+T S +IE F E LL+ + ++ V + +F R Y K H+ + V +F +
Sbjct: 78 STLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHR 137
Query: 219 LKSNSVVLDS-RGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESL 277
+ S + ++ ++ ++ + + N+ + G + ++ ++L
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 197
Query: 278 GKCGRVSEALEYFRVMT-KKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
K V A+E FR M +K + + Y TL+ ++ E LL E +S P
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEK 396
+Y L+ ++ L + ++V+ M + +++G + AV E+
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
++S P VTY ++IN + + A ++ ME++G+ YS +I + G+
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGK 377
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
AM L KM E+GCKPN+ VY+ L+D RE + +++ N M P+ +Y+S
Sbjct: 378 AEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSS 437
Query: 517 MIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
++ + K G E +++ E G ++ +++ VG++ + + + M G
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIG 497
Query: 577 TRLDQRLYQSAWNAFIEAG 595
+ D Y S G
Sbjct: 498 IKPDTVAYSSIIKGLCGIG 516
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 151/344 (43%), Gaps = 5/344 (1%)
Query: 194 FAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHE 253
+F ++ KL R + VF + + D Y +M+ K + + V L E
Sbjct: 188 LSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDE 247
Query: 254 FESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFA 312
+S S IY VL + L K G ++ + M KG + V Y+TLI
Sbjct: 248 MQSEGCSPSP----VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 313 SLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDC 372
K+ + LL S I + Y L+ V++ + ++ +M++ +
Sbjct: 304 LKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQH 363
Query: 373 MLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
+ +++G K A+ + K+ +G +P V Y+ +++ CR + N+A+++ M
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423
Query: 433 EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL 492
G YSS++ + ++G A+++ +M + GC N + Y+ LID +
Sbjct: 424 IASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRV 483
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
++ +W++M + PD V+Y+S+I G + +L++E
Sbjct: 484 KEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 156/381 (40%), Gaps = 24/381 (6%)
Query: 152 IYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRR 211
IY+VL DG C + ++ + + N F + + + +
Sbjct: 259 IYNVLIDG--------LCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310
Query: 212 TVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQ-IY 270
V + E++ S+ + + Y ++ K V+L E R +L Q IY
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY-----HLNQHIY 365
Query: 271 GVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKS 329
VL L K G+ EA+ +R M +KG + VYS L+ K E +E+L +
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
+ + Y L+ + + L E+ ++V + M +++G
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKE 485
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM---EQKGFDKCVVAYSS 446
A+ + K+++ G +P V Y+S+I C + + A K++ EM E+ VV Y+
Sbjct: 486 AMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNI 545
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQ-----LEKLWNE 501
++ + A+ L+ M +RGC P+V N+ ++ + N LE+L
Sbjct: 546 LLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVR 605
Query: 502 -MKRRKVAPDKVSYTSMIGAY 521
+KR++V+ M+G Y
Sbjct: 606 LLKRQRVSGACTIVEVMLGKY 626
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 162/387 (41%), Gaps = 10/387 (2%)
Query: 220 KSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGK 279
K S L S ++E+Y+ D +SV KL SR +++ + + + V+ + GK
Sbjct: 69 KMGSFKLGDSTLSSMIESYANSGDFDSVEKLL----SRIRLENRVIIERSFIVVFRAYGK 124
Query: 280 CGRVSEALEYFRVMTKKGIFESSVYS-----TLICSFASLHKVGEVEELLREAKSRTKIK 334
+A++ F M + + SV S +I + H+ E + + + I
Sbjct: 125 AHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNIS 184
Query: 335 DPEVYLKLVI-MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+ LVI + +++ +EV M + C +++G K AV
Sbjct: 185 PNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLL 244
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+++ S+G P V Y +I+ C+ + K+ + M KG V Y+++I
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 304
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
G+L A+ L+ +M C PN Y +LI+ +++ +L + M+ R ++
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHI 364
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
Y+ +I K G+ E L+ + G + + ++V + G+ ++ ++L M
Sbjct: 365 YSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMI 424
Query: 574 MEGTRLDQRLYQSAWNAFIEAGLQLQA 600
G + Y S F + GL +A
Sbjct: 425 ASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 96/225 (42%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
V+ K R A+ + + + P TY ++++ C+ + ++A + +EM+ +G
Sbjct: 193 VIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
V Y+ +I + G L KLV M +GC PN YN+LI + L +
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAV 312
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
L M K P+ V+Y ++I K L + G +++ + +++
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL 372
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
K G+ ++ + L + M +G + + +Y + G +AK
Sbjct: 373 FKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 156/323 (48%), Gaps = 7/323 (2%)
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSR 330
+L + GK G + A V++K G + + Y+ L+ S+ K E + R +S
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD---ADVKVCDCMLCAVVNGFSKRRGF 387
Y ++ +VE D ++ EV E + D + +K M ++ + K +
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A + + ++ +G VTY S+++ + Y + K++++M++ VV+Y+ +
Sbjct: 271 EKARKVFSSMVGKGVPQSTVTYNSLMSFE---TSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I YGR+ R A+ + +M + G +P YN L+D + Q + ++ M+R ++
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
PD SYT+M+ AY A + E + F +++G + G ++ ++K ++++++
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 447
Query: 568 LLQDMKMEGTRLDQRLYQSAWNA 590
+ + M++ G + +Q + + +A
Sbjct: 448 VYEKMRLSGIKANQTILTTIMDA 470
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 16/366 (4%)
Query: 175 FKIAETLLNAF-KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSH 233
F AE +L+ K S V ++ + + +Y + +F +++S+ + Y
Sbjct: 162 FNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQI 221
Query: 234 IMEAY---SKLDDCESVVK-LFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEY 289
I++ + K + E V + L E +S D K Y IY K G +A +
Sbjct: 222 ILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY-----MYKKAGNYEKARKV 276
Query: 290 FRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV--YLKLVIMYV 347
F M KG+ +S+V + SF + +K EV ++ + + R+ I+ P+V Y L+ Y
Sbjct: 277 FSSMVGKGVPQSTVTYNSLMSFETSYK--EVSKIYDQMQ-RSDIQ-PDVVSYALLIKAYG 332
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
E+ L V E M DA V+ +++ F+ A ++ + P
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 392
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
+Y ++++AY S AEK F+ ++ GF+ +V Y ++I Y ++ + M++ KM
Sbjct: 393 SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 452
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
+ G K N + +++D GR KN + EM+ V PD+ + ++ S E
Sbjct: 453 RLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 512
Query: 528 ETCTEL 533
E EL
Sbjct: 513 EEAKEL 518
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 54/348 (15%)
Query: 261 DSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEV 320
D KR+ G L + G L ++ +G+ V TL+ F L K V
Sbjct: 76 DQKRWRG-----LMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLV-RFKQLKKWNLV 129
Query: 321 EELLREAKSRTKIKDPEV-YLKLVIMYVEE---DLLEKTLEVVEAMKDADVKVCDCMLCA 376
E+L + + E+ +L L+ Y + + E+ L V+ M + A
Sbjct: 130 SEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS---YTA 186
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM---E 433
++ + + + A + ++ S G EP +TY ++ + ++ +AE+VFE + +
Sbjct: 187 LMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK 246
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+ Y MI MY ++G A K+ + M +G + YNSL+ E + +
Sbjct: 247 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYK 303
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
++ K++++M+R + PD VSY +I AY +A E +F E
Sbjct: 304 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE----------------- 346
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
M G R + Y +AF +G+ QAK
Sbjct: 347 ------------------MLDAGVRPTHKAYNILLDAFAISGMVEQAK 376
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 156/323 (48%), Gaps = 7/323 (2%)
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSR 330
+L + GK G + A V++K G + + Y+ L+ S+ K E + R +S
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD---ADVKVCDCMLCAVVNGFSKRRGF 387
Y ++ +VE D ++ EV E + D + +K M ++ + K +
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A + + ++ +G VTY S+++ + Y + K++++M++ VV+Y+ +
Sbjct: 264 EKARKVFSSMVGKGVPQSTVTYNSLMSFE---TSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I YGR+ R A+ + +M + G +P YN L+D + Q + ++ M+R ++
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
PD SYT+M+ AY A + E + F +++G + G ++ ++K ++++++
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME 440
Query: 568 LLQDMKMEGTRLDQRLYQSAWNA 590
+ + M++ G + +Q + + +A
Sbjct: 441 VYEKMRLSGIKANQTILTTIMDA 463
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 16/366 (4%)
Query: 175 FKIAETLLNAF-KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSH 233
F AE +L+ K S V ++ + + +Y + +F +++S+ + Y
Sbjct: 155 FNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQI 214
Query: 234 IMEAY---SKLDDCESVVK-LFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEY 289
I++ + K + E V + L E +S D K Y IY K G +A +
Sbjct: 215 ILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIY-----MYKKAGNYEKARKV 269
Query: 290 FRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV--YLKLVIMYV 347
F M KG+ +S+V + SF + +K EV ++ + + R+ I+ P+V Y L+ Y
Sbjct: 270 FSSMVGKGVPQSTVTYNSLMSFETSYK--EVSKIYDQMQ-RSDIQ-PDVVSYALLIKAYG 325
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
E+ L V E M DA V+ +++ F+ A ++ + P
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
+Y ++++AY S AEK F+ ++ GF+ +V Y ++I Y ++ + M++ KM
Sbjct: 386 SYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKM 445
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
+ G K N + +++D GR KN + EM+ V PD+ + ++ S E
Sbjct: 446 RLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDEL 505
Query: 528 ETCTEL 533
E EL
Sbjct: 506 EEAKEL 511
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 139/348 (39%), Gaps = 54/348 (15%)
Query: 261 DSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEV 320
D KR+ G L + G L ++ +G+ V TL+ F L K V
Sbjct: 69 DQKRWRG-----LMLEIESTGSAVPVLRQYKTDGDQGLPRDLVLGTLV-RFKQLKKWNLV 122
Query: 321 EELLREAKSRTKIKDPEV-YLKLVIMYVEE---DLLEKTLEVVEAMKDADVKVCDCMLCA 376
E+L + + E+ +L L+ Y + + E+ L V+ M + A
Sbjct: 123 SEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS---YTA 179
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM---E 433
++ + + + A + ++ S G EP +TY ++ + ++ +AE+VFE + +
Sbjct: 180 LMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK 239
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+ Y MI MY ++G A K+ + M +G + YNSL+ E + +
Sbjct: 240 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF---ETSYK 296
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
++ K++++M+R + PD VSY +I AY +A E +F E
Sbjct: 297 EVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE----------------- 339
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
M G R + Y +AF +G+ QAK
Sbjct: 340 ------------------MLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 187/435 (42%), Gaps = 37/435 (8%)
Query: 175 FKIAETLLNAFKSDSEVAVFAFGSALRNYN----------------KLHMFRRTVLVFEK 218
+ + LLN K SE A F ALRN K FR T+ VF
Sbjct: 112 YLLLSVLLNESKMISEAADLFF--ALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLN 169
Query: 219 LKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLG 278
+ + Y ++A KL D ++LF+ + + S IY VL + L
Sbjct: 170 ILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVF----IYNVLIDGLC 225
Query: 279 KCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPE 337
K R+++A + F M + + S + Y+TLI + K G E + K R ++K
Sbjct: 226 KGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYC---KAGNPE---KSFKVRERMKADH 279
Query: 338 VYLKLVIMYV------EEDLLEKTLEVVEAMKDADVKVCDCMLCAVV-NGFSKRRGFSAA 390
+ L+ + ++E V++ MKD V D +++ +G+S AA
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF-VPDAFTFSILFDGYSSNEKAEAA 338
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
+ YE + G + T + ++NA C+ + KAE++ KG V Y++MI
Sbjct: 339 LGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
Y R G L A + M+++G KP+ YN LI + EK N+MK + V+P
Sbjct: 399 YCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
+Y +IG Y + EF+ C ++ E NG + + G ++ K ++ + + +
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518
Query: 571 DMKMEGTRLDQRLYQ 585
DM+ G R+Y
Sbjct: 519 DMEDRGVSPKVRIYN 533
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 114/564 (20%), Positives = 215/564 (38%), Gaps = 82/564 (14%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVL------PDGATCSKLIEFCIRQR 173
F +LKH YL+ + +SE ++ L P + + L++ ++ +
Sbjct: 99 FSLSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTK 158
Query: 174 KFKIA-ETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYS 232
+F++ LN +SD + F +G A++ KL + + +F ++K + + Y+
Sbjct: 159 QFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYN 218
Query: 233 HIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRV 292
+++ K +LF E +R L S Y L + K G ++ +
Sbjct: 219 VLIDGLCKGKRMNDAEQLFDEMLARRLLPSL----ITYNTLIDGYCKAGNPEKSFKVRER 274
Query: 293 MTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDL 351
M I S + ++TL+ V + E +L+E K + D + L Y +
Sbjct: 275 MKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK 334
Query: 352 LEKTLEVVEAMKDADVKV----CDCMLCAV------------------------------ 377
E L V E D+ VK+ C +L A+
Sbjct: 335 AEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNT 394
Query: 378 -VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++G+ ++ A E + QG +P + Y +I +C L + AEK +M+ KG
Sbjct: 395 MIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG 454
Query: 437 --------------------FDKC---------------VVAYSSMIVMYGRSGRLRNAM 461
FDKC VV+Y ++I + +L A
Sbjct: 455 VSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ 514
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
+ M++RG P V +YN LID + + + EM ++ + + V+Y ++I
Sbjct: 515 IVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
S G+ +L E G D ++ + G + + + L ++MK G +
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 582 RLYQSAWNAFIEAGLQLQAKWLQE 605
+ Y + + G++L + E
Sbjct: 635 KTYHLLISLCTKEGIELTERLFGE 658
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/309 (20%), Positives = 130/309 (42%), Gaps = 6/309 (1%)
Query: 287 LEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMY 346
L+ R+ T +G+ SS+ + FAS ++ L S +K YL L ++
Sbjct: 66 LQQNRIETARGVL-SSLLRSDSTPFASPKELFSAFSL-----SSPSLKHDFSYLLLSVLL 119
Query: 347 VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQ 406
E ++ + ++ A+++ + L +++ K + F + + ++ + P +
Sbjct: 120 NESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSK 179
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
Y I A +LS K ++F M+ V Y+ +I + R+ +A +L +
Sbjct: 180 FMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDE 239
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
M R P++ YN+LID + + N + K+ MK + P +++ +++ KAG
Sbjct: 240 MLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGM 299
Query: 527 FETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
E + E + G V D I+ +S + + + + + G +++
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 587 AWNAFIEAG 595
NA + G
Sbjct: 360 LLNALCKEG 368
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 146/363 (40%), Gaps = 44/363 (12%)
Query: 192 AVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLF 251
+V + + Y + + F + + ++++ N + + Y ++ K +
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517
Query: 252 HEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICS 310
+ E R + R IY +L + G++ +A + + M KKGI Y+TLI
Sbjct: 518 RDMEDRGVSPKVR----IYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 311 FASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVC 370
+ K+ E E+LL E SR +K P+V+
Sbjct: 574 LSMTGKLSEAEDLLLEI-SRKGLK-PDVF------------------------------- 600
Query: 371 DCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFE 430
++++G+ + YE++ G +P TY +I + C E++F
Sbjct: 601 --TYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFG 657
Query: 431 EMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREK 490
EM K ++ Y+ ++ Y G + A L +M E+ + YNSLI +
Sbjct: 658 EMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Query: 491 NLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAG 550
L ++ L +EM R++ P+ +Y ++ + + ++ + + E + G ++D +
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGN 774
Query: 551 IMV 553
+V
Sbjct: 775 ELV 777
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 156/329 (47%), Gaps = 12/329 (3%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLI--CSFASLHKVGEVEELLRE 326
+ L + G+ G EA+ F M + G+ + V Y+ +I C + + +V + E
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM-EFKQVAKFFDE 329
Query: 327 AKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNGFS 382
+ D + L+ + L E + + M + DV + +L A+ G
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
F + K I P V+Y++VI+ + + ++++A +F EM G V
Sbjct: 390 MDLAFEILAQMPVKRIM----PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
+Y++++ +Y + GR A+ ++ +M G K +V YN+L+ +G++ +++K++ EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
KR V P+ ++Y+++I YSK G ++ E+F E++ G D + ++ K G +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 563 DQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
V L+ +M EG + Y S +AF
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 160/368 (43%), Gaps = 34/368 (9%)
Query: 159 GATCSKLIEFCIRQRKFKIAETLL-NAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFE 217
G S +I R K IA+ + AF V+AF + + Y + + + VF
Sbjct: 233 GKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFN 292
Query: 218 KLKSNSVVLDSRGYSHIMEAYSKLD-DCESVVKLFHEFE--------------------- 255
+K + + Y+ +++A K + + V K F E +
Sbjct: 293 SMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRG 352
Query: 256 -----SRNLRD--SKRYLGQ---IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-Y 304
+RNL D + R + Q Y L +++ K G++ A E M K I + V Y
Sbjct: 353 GLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSY 412
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD 364
ST+I FA + E L E + D Y L+ +Y + E+ L+++ M
Sbjct: 413 STVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 365 ADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNK 424
+K A++ G+ K+ + + + ++ + P +TY+++I+ Y + Y +
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 425 AEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
A ++F E + G VV YS++I ++G + +A+ L+ +M + G PNV YNS+ID
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIID 592
Query: 485 MHGREKNL 492
GR +
Sbjct: 593 AFGRSATM 600
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 173/394 (43%), Gaps = 42/394 (10%)
Query: 208 MFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLG 267
MF +L FE S + S ++I+ ++C+ V F+EF + R K G
Sbjct: 181 MFHSLMLSFE-----SKLCGSDDCTYIIRELGNRNECDKAVG-FYEFAVKRER-RKNEQG 233
Query: 268 QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREA 327
++ + +LG+ G+V+ A F G Y + +F++L
Sbjct: 234 KLASAMISTLGRYGKVTIAKRIFETAFAGG------YGNTVYAFSAL------------- 274
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKR-RG 386
+ Y L E+ + V +MK+ ++ AV++ K
Sbjct: 275 ---------------ISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGME 319
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
F + ++++ G +P ++T+ S++ R + A +F+EM + ++ V +Y++
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
++ + G++ A +++A+M + PNV Y+++ID + + L+ EM+
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
+A D+VSY +++ Y+K G E ++ E G D ++G + K G+ D++
Sbjct: 440 IALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVK 499
Query: 567 KLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
K+ +MK E + Y + + + + GL +A
Sbjct: 500 KVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEA 533
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 183/445 (41%), Gaps = 14/445 (3%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLN-----AFKSDSEVAVFAFGSALRNYNKLHMFRR 211
PD T S L+ ++ A L++ +K D+ F F + + +
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT----FTFTTLIHGLFLHNKASE 206
Query: 212 TVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYG 271
V + +++ D Y ++ K D + + L + E + IY
Sbjct: 207 AVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV----VIYN 262
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSR 330
+ + L K + +AL F M KGI YS+LI + + + LL + R
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA 390
+ + L+ +V+E L + ++ + M + +++NGF A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
+E +IS+ P VTY+++I +C+ + + ++F EM Q+G V Y+++I
Sbjct: 383 KHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ ++ NA + +M G PN+ YN L+D + L + ++ ++R + PD
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
+Y MI KAG+ E ELF + G + M+ F + G ++ LL+
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 571 DMKMEGTRLDQRLYQSAWNAFIEAG 595
MK +G + Y + A + G
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDG 587
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/502 (23%), Positives = 197/502 (39%), Gaps = 84/502 (16%)
Query: 85 PGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFR---PEKSTLKHVIRYLMRFKKWD 141
P T + GLF K E L D+ V R P+ T V+ L + D
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAV-----ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 142 FILS---------VSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVA 192
LS + D IY+ + DG C K+K + LN F
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDG--------LC----KYKHMDDALNLFTEMDNKG 288
Query: 193 ----VFAFGS---ALRNYNKLHMFRRTV--LVFEKLKSNSVVLDSRGYSHIMEAYSKLDD 243
VF + S L NY + R + ++ K+ N V +S +++A+ K
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVT-----FSALIDAFVKEGK 343
Query: 244 CESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV 303
KL+ E R++ D + Y L R+ EA F +M K F + V
Sbjct: 344 LVEAEKLYDEMIKRSI-DPDIF---TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVV 399
Query: 304 -YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
YSTLI F +V E EL RE R + + Y L+
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI------------------- 440
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
+GF + R A +++++S G P +TY +++ C+ +
Sbjct: 441 ----------------HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL 484
Query: 423 NKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL 482
KA VFE +++ + + Y+ MI ++G++ + +L + +G PNV YN++
Sbjct: 485 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTM 544
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG 542
I R+ + + + L +MK P+ +Y ++I A + G+ E EL E R G
Sbjct: 545 ISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Query: 543 VIDRAMAGIMVGVFSKVGQIDQ 564
D + G++ + G++D+
Sbjct: 605 AGDASTIGLVTNMLHD-GRLDK 625
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 147/314 (46%), Gaps = 7/314 (2%)
Query: 282 RVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
+V +A++ F M K F S V ++ L+ + A ++K V L + ++ D Y
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
+ + L L V+ M + L +++NG+ + S AV ++++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
GY+P T+ ++I+ ++ ++A + ++M Q+G +V Y +++ + G + A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+ L+ KM++ + +V +YN++ID + K++ L+ EM + + PD +Y+S+I
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 521 YSKAGEFETCTELFN---EYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
G + + L + E +IN V+ + ++ F K G++ + KL +M
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSA---LIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 578 RLDQRLYQSAWNAF 591
D Y S N F
Sbjct: 360 DPDIFTYSSLINGF 373
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 106/228 (46%)
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+N F +R S A+ K++ GYEP VT +S++N YC + + A + ++M + G+
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
++++I + A+ LV +M +RGC+P++ Y ++++ + ++
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 498 LWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFS 557
L +M++ K+ D V Y ++I K + LF E G D ++
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 558 KVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
G+ +LL DM + + + +AF++ G ++A+ L +
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 143/327 (43%), Gaps = 7/327 (2%)
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGI----FESSVYSTLICSFASLHKVGEVEELLREAK 328
L SL + G V A ++ +++ G+ + ++ +C + KVG L + +
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGT---FLSQVQ 262
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
+ D Y L+ Y + L+E+ E++ AM V+NG K +
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A + +++ G P TY S++ C+ + EKVF +M + +V +SSM+
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM 382
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
++ RSG L A+ +KE G P+ +Y LI + R+ + L NEM ++ A
Sbjct: 383 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA 442
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
D V+Y +++ K +LFNE D I++ K+G + ++L
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 569 LQDMKMEGTRLDQRLYQSAWNAFIEAG 595
Q MK + RLD Y + + F + G
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVG 529
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 151/322 (46%), Gaps = 5/322 (1%)
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
+++ V D Y+ ++ AYS E +L + + + LC
Sbjct: 258 LSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC- 316
Query: 276 SLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIK 334
K G+ A E F M + G+ +S+ Y +L+ V E E++ + +SR +
Sbjct: 317 ---KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
D + ++ ++ L+K L ++K+A + + + ++ G+ ++ S A+
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+++ QG VTY ++++ C+ +A+K+F EM ++ + +I + +
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
G L+NAM+L KMKE+ + +V YN+L+D G+ ++ +++W +M +++ P +SY
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 515 TSMIGAYSKAGEFETCTELFNE 536
+ ++ A G +++E
Sbjct: 554 SILVNALCSKGHLAEAFRVWDE 575
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 162/372 (43%), Gaps = 7/372 (1%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
VF ++S VV D +S +M +++ + + + F+ + L IY +L
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN----VIYTILI 417
Query: 275 ESLGKCGRVSEALEYFRVMTKKG-IFESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ + G +S A+ M ++G + Y+T++ +GE ++L E R
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D L+ + + L+ +E+ + MK+ +++ +++GF K A
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+ ++S+ P ++Y+ ++NA C +A +V++EM K V+ +SMI Y R
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK--VAPDK 511
SG + + KM G P+ YN+LI RE+N+ + L +M+ + + PD
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDV 657
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQD 571
+Y S++ + + + + + + G DR+ M+ F + + ++ +
Sbjct: 658 FTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDE 717
Query: 572 MKMEGTRLDQRL 583
M G D +
Sbjct: 718 MLQRGFSPDDKF 729
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 142/336 (42%), Gaps = 24/336 (7%)
Query: 277 LGKCGRVSEALE-YFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKD 335
L + GR+S+A R++ + G+ + ++L +F++ V +LL
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLL----------- 171
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYE 395
+ YV+ L + E ++ V A++ + A Y+
Sbjct: 172 -------IRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
++ G T ++NA C+ + K ++++KG +V Y+++I Y G
Sbjct: 225 EISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKG 284
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
+ A +L+ M +G P V+ YN++I+ + + ++++ EM R ++PD +Y
Sbjct: 285 LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYR 344
Query: 516 SMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
S++ K G+ ++F++ R V D M+ +F++ G +D+ + +K
Sbjct: 345 SLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEA 404
Query: 576 GTRLDQRLYQSAWNAF-----IEAGLQLQAKWLQES 606
G D +Y + I + L+ + LQ+
Sbjct: 405 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG 440
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 156/323 (48%), Gaps = 9/323 (2%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLR-- 325
++ +L K G +S+A + F +TK+ + + V ++TLI + KVG ++E R
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC---KVGNLDEGFRLK 298
Query: 326 --EAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
KSRT+ D Y L+ +E+ ++ + + M + D + +++G S+
Sbjct: 299 HQMEKSRTR-PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
+Y+K++S+G +P V Y +++N +C+ A + + M ++G +
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
Y+++I + R G + A+++ +M + G + + +++L+ +E + E+ EM
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
R + PD V+YT M+ A+ K G+ +T +L E + +G V +++ K+GQ+
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 564 QLVKLLQDMKMEGTRLDQRLYQS 586
LL M G D Y +
Sbjct: 538 NADMLLDAMLNIGVVPDDITYNT 560
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/429 (22%), Positives = 194/429 (45%), Gaps = 29/429 (6%)
Query: 200 LRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFES--- 256
L N+N L + +R++ F K S+ G+ +E Y L +V ++F E +S
Sbjct: 88 LINHNPLSLPQRSIFAFFKFISSQ-----PGFRFTVETYFVLARFLAVHEMFTEAQSLIE 142
Query: 257 ----RNLRDS---------KRYLGQIYGVLCESL----GKCGRVSEALEYFRVMTKKGIF 299
R ++S + + + G L ++L G + +A++ FR +++K F
Sbjct: 143 LVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCFR-LSRKHRF 201
Query: 300 ESSVYS--TLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE 357
+ + L+ L+ G + E + V+ L+ + +E + +
Sbjct: 202 DVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQK 261
Query: 358 VVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC 417
V + + ++ ++NG+ K R ++ P TY+++INA C
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 418 RLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVW 477
+ ++ + A +F+EM ++G V ++++I + R+G + + KM +G +P++
Sbjct: 322 KENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIV 381
Query: 478 VYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEY 537
+YN+L++ + +L + + M RR + PDK++YT++I + + G+ ET E+ E
Sbjct: 382 LYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEM 441
Query: 538 RINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG-L 596
NG +DR +V K G++ + L++M G + D Y +AF + G
Sbjct: 442 DQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDA 501
Query: 597 QLQAKWLQE 605
Q K L+E
Sbjct: 502 QTGFKLLKE 510
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 149/331 (45%), Gaps = 41/331 (12%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
VF+++ S+ ++ ++ Y K+ + + +L H+ E R Y L
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVF----TYSALI 317
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
+L K ++ A F M K+G+ + V ++TLI + + GE+ +L++E+
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS---RNGEI-DLMKES------ 367
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
Y K++ ++ D++ + +VNGF K AA
Sbjct: 368 -----YQKMLSKGLQPDIV--------------------LYNTLVNGFCKNGDLVAARNI 402
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+ +I +G P ++TY ++I+ +CR A ++ +EM+Q G + V +S+++ +
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
GR+ +A + + +M G KP+ Y ++D ++ + + KL EM+ P V+
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVI 544
Y ++ K G+ + L + +N GV+
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAM-LNIGVV 552
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 141/342 (41%), Gaps = 8/342 (2%)
Query: 186 KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCE 245
K + V +F + + Y K+ + +++ + D YS ++ A K + +
Sbjct: 268 KRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMD 327
Query: 246 SVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-Y 304
LF E R L + I+ L + G + E ++ M KG+ V Y
Sbjct: 328 GAHGLFDEMCKRGLIPND----VIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLY 383
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD 364
+TL+ F + ++ R D Y L+ + +E LE+ + M
Sbjct: 384 NTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ 443
Query: 365 ADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNK 424
+++ A+V G K A RA +++ G +P VTY +++A+C+
Sbjct: 444 NGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQT 503
Query: 425 AEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
K+ +EM+ G VV Y+ ++ + G+++NA L+ M G P+ YN+L++
Sbjct: 504 GFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE 563
Query: 485 MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
H R N K + + + D SY S++ +A +
Sbjct: 564 GHHRHAN---SSKRYIQKPEIGIVADLASYKSIVNELDRASK 602
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 197/455 (43%), Gaps = 18/455 (3%)
Query: 154 HVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRT 212
H PD T + LI + + A K D + ++ + L ++ HM
Sbjct: 362 HCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEA 421
Query: 213 VLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGV 272
+ ++ ++V +D S + Y + + E F F S+ Y I
Sbjct: 422 EGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANI--- 478
Query: 273 LCESLGKCGRVSEALEYF---RVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKS 329
++ G+ G +SEA F + + K+ + E Y+ +I ++ + EL S
Sbjct: 479 --DAYGERGYLSEAERVFICCQEVNKRTVIE---YNVMIKAYGISKSCEKACELFESMMS 533
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCM-LCAVVNGFSKRRGFS 388
D Y LV + D+ K +E M++ V DC+ CAV++ F K +
Sbjct: 534 YGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGY-VSDCIPYCAVISSFVKLGQLN 592
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A Y++++ EP V Y +INA+ +A E M++ G V Y+S+I
Sbjct: 593 MAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI 652
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCK---PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
+Y + G L A + K+ + K P+V+ N +I+++ +R+ E +++ MK+R
Sbjct: 653 KLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQR 712
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
A ++ ++ M+ Y K G FE T++ + R + D ++G+F+ G+ +
Sbjct: 713 GEA-NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEA 771
Query: 566 VKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
V+ ++M G + D ++S ++ G+ +A
Sbjct: 772 VETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKA 806
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 106/222 (47%), Gaps = 9/222 (4%)
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM---EQKGFDKCVVA---YSSMIV 449
K+ G +P +VT V+ Y + ++ KAE+ F++ E K ++ Y++MI
Sbjct: 247 KMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMID 306
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
YG+SG+++ A + +M E G P +N++I ++G L ++ L MK AP
Sbjct: 307 TYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH-CAP 365
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
D +Y +I ++K + E F E + +G D ++ FS +++ L+
Sbjct: 366 DTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLI 425
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQ-ESFHVS 610
+M + +D+ + ++EA + L+ W + FHV+
Sbjct: 426 AEMDDDNVEIDEYTQSALTRMYVEAEM-LEKSWSWFKRFHVA 466
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 93/203 (45%), Gaps = 8/203 (3%)
Query: 390 AVRAYEKLISQG-YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
AV +E S+G YE + Y ++ + ++ + +++EM +KG Y ++I
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE---KLWNEMKRR 505
+Y + G +A+ + KM + G +P+ ++ M+ + + ++ E K W+ + +
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 506 ---KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
V +Y +MI Y K+G+ + +E F G V M+ ++ GQ+
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL 349
Query: 563 DQLVKLLQDMKMEGTRLDQRLYQ 585
++ L++ MK+ D R Y
Sbjct: 350 GEVTSLMKTMKLHCAP-DTRTYN 371
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 112/480 (23%), Positives = 205/480 (42%), Gaps = 65/480 (13%)
Query: 110 YYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFC 169
++ ++ RP+ P + ++ + + KK+D ++ + E ++ + + TC+ L+
Sbjct: 69 FFHMVQCRPL--PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 170 IRQRKFKIAETLLN-AFKSDSEVAVFAFGSAL-------RNYNKLHMFRRTVLVFEKLKS 221
R + +A + L K E ++ FGS L R Y+ L+MF + +V K
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQ--MVGMGYKP 184
Query: 222 NSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCG 281
N V+ Y+ I++ K ++ + L + E + + LC S G
Sbjct: 185 NVVI-----YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS----G 235
Query: 282 RVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
R S+A MTK+ I+ + ++ LI + +V E EE E R+ DP++
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS--LDPDIVT 293
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
+++Y G A + ++S+
Sbjct: 294 YSLLIY---------------------------------GLCMYSRLDEAEEMFGFMVSK 320
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G P VTY+ +IN YC+ + K+F EM Q+G + V Y+ +I Y R+G+L A
Sbjct: 321 GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK---LWNEMKRRKVAPDKVSYTSM 517
++ +M G PN+ YN L +HG N ++EK + +M++ + D V+Y +
Sbjct: 381 EEIFRRMVFCGVHPNIITYNVL--LHGLCDN-GKIEKALVILADMQKNGMDADIVTYNII 437
Query: 518 IGAYSKAGEFETCTELFNEYRINGGVID-RAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
I KAGE +++ G + D +M+G++ K G + L + MK +G
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK-GLRREADALFRKMKEDG 496
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 108/220 (49%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+++NGF + A+ +++++ GY+P V Y ++I+ C+ Q + A + ME+
Sbjct: 156 SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD 215
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G VV Y+S+I SGR +A ++V+ M +R P+V+ +N+LID +E + +
Sbjct: 216 GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEA 275
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
E+ + EM RR + PD V+Y+ +I + E+F G D I++
Sbjct: 276 EEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILING 335
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ K +++ +KL +M G + Y + AG
Sbjct: 336 YCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 177/455 (38%), Gaps = 21/455 (4%)
Query: 168 FCIRQRKFKIA----ETLLNAF---KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLK 220
FC +R + E L N K D + +F R + F R + K+K
Sbjct: 36 FCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMK 95
Query: 221 SNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI----------- 269
VV+ ++ L C ++ F +L S +LG++
Sbjct: 96 KYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS--FLGKMIKLGHEPSIVT 153
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
+G L + RV +AL F M G + V Y+T+I +V +LL +
Sbjct: 154 FGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
D Y L+ +V M ++ A+++ K S
Sbjct: 214 KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVS 273
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A YE++I + +P VTY+ +I C S+ ++AE++F M KG VV YS +I
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILI 333
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
Y +S ++ + MKL +M +RG N Y LI + R L E+++ M V
Sbjct: 334 NGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVH 393
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
P+ ++Y ++ G+ E + + + NG D I++ K G++ +
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDI 453
Query: 569 LQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+ +G D Y + + GL+ +A L
Sbjct: 454 YCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 172/374 (45%), Gaps = 19/374 (5%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ K++ ++ LD+ YS I++ K ++ LF+E E + + + + G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFC 309
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ GR + + R M K+ I + V +S LI SF K+ E EEL +E R
Sbjct: 310 NA----GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMK----DADVKVCDCMLCAVVNGFSKRRGFSA 389
D Y L+ + +E+ L+K ++V+ M D +++ + + +NG+ K
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL----INGYCKANRIDD 421
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
+ + K+ +G VTY ++I +C L + N A+++F+EM + +V Y ++
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN---EMKRRK 506
+G A+++ K+++ + ++ +YN +I HG N +++ W+ + +
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIII--HGM-CNASKVDDAWDLFCSLPLKG 538
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
V P +Y MIG K G LF + +G D I++ G + V
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 567 KLLQDMKMEGTRLD 580
KL++++K G +D
Sbjct: 599 KLIEELKRCGFSVD 612
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 114/236 (48%), Gaps = 1/236 (0%)
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
L ++N F + R A A K+I GYEP +T++++IN C + ++A ++ + M
Sbjct: 126 LSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+ G ++ ++++ SG+ AM L+ KM E GC+PN Y ++++ +
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+L +M+ R + D V Y+ +I K G + LFNE + G + I++
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL-QESFH 608
G F G+ D KLL+DM + + ++F++ G +A+ L +E H
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 168/393 (42%), Gaps = 42/393 (10%)
Query: 213 VLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYG 271
+L+ +K+ ++ Y ++ K ++L + E RN++ D+ +Y
Sbjct: 213 MLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY-----S 267
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSR 330
++ + L K G + A F M KGI + + Y+ LI F + + + +LLR+ R
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA 390
KI +P V T V+ ++ F K A
Sbjct: 328 -KI-NPNVV---------------TFSVL------------------IDSFVKEGKLREA 352
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
++++I +G P +TY S+I+ +C+ + +KA ++ + M KG D + ++ +I
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
Y ++ R+ + ++L KM RG + YN+LI L ++L+ EM RKV P+
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPN 472
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
V+Y ++ GE E E+F + + +D + I++ ++D L
Sbjct: 473 IVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFC 532
Query: 571 DMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+ ++G + + Y + G +A+ L
Sbjct: 533 SLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELL 565
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 134/293 (45%), Gaps = 1/293 (0%)
Query: 281 GRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
GRVSEALE M + G + +TL+ K E L+ + + Y
Sbjct: 172 GRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTY 231
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
++ + + +E++ M++ ++K+ +++G K A + ++
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+G +TY +I +C +++ K+ +M ++ + VV +S +I + + G+LR
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
A +L +M RG P+ Y SLID +E +L + ++ + M + P+ ++ +I
Sbjct: 352 AEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILIN 411
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
Y KA + ELF + + G V D ++ F ++G+++ +L Q+M
Sbjct: 412 GYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 89/206 (43%)
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
A+ + +I P + ++ + +A + QY+ + ++ME KG + S MI
Sbjct: 72 AIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMIN 131
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
+ R +L A + K+ + G +PN +++LI+ E + + +L + M P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
D ++ +++ +G+ L ++ G + G ++ V K GQ ++LL
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ M+ +LD Y + + G
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKHG 277
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 159/330 (48%), Gaps = 17/330 (5%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREA 327
IYGVL + L K G + A+ + M + I V+++LI + L++ E ++ R
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEK------TLEVVEAMK----DADVKVCDCMLCAV 377
D + ++ + + ED K L++ + M+ AD+ VC+ V
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN----VV 578
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
++ K A + + LI EP VTY ++I YC L + ++AE++FE ++ F
Sbjct: 579 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 638
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
V + +I + ++ + A+++ + M E+G KPN Y L+D + ++ K
Sbjct: 639 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 698
Query: 498 LWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA-GIMVGVF 556
L+ EM+ + ++P VSY+ +I K G + T +F++ I+ ++ +A I++ +
Sbjct: 699 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ-AIDAKLLPDVVAYAILIRGY 757
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
KVG++ + L + M G + D L ++
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPDDLLQRA 787
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
C ++NGF KR A ++ + +G EP + Y+++I+ Y + K+F +
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
KG VV +SS I +Y +SG L A + +M +G PNV Y LI ++ +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+ ++ ++ +R + P V+Y+S+I + K G + L+ + G D + G++V
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS---AW---NAFIEA 594
SK G + ++ M + RL+ ++ S W N F EA
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 141/316 (44%), Gaps = 10/316 (3%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
+ L K G + A + F+VM ++GI + YSTLI + +G +L +A
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
+ D V+ + +YV+ L V + M + ++ G +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A Y +++ +G EP VTY+S+I+ +C+ ++E+M + G+ VV Y ++
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
+ G + +AM+ KM + + NV V+NSLID R + K++ M +
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 509 PDKVSYTSMI------GAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
PD ++T+++ A+ K + +LF+ + N D A+ +++ + K +I
Sbjct: 529 PDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRI 588
Query: 563 DQLVKLLQDM---KME 575
+ K ++ KME
Sbjct: 589 EDASKFFNNLIEGKME 604
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 157/357 (43%), Gaps = 5/357 (1%)
Query: 245 ESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALE-YFRVMTKKGIFESSV 303
+S ++ E RN+ G + L L K G+ S+ALE +F+ + K + ++
Sbjct: 452 DSALRFVGEMLLRNMSPG----GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 304 YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK 363
+ L+ K+ E + +E R + D Y L+ + L++ ++ M
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYN 423
+K + ++ G A++ ++ G P TY+ +I+ C+ +
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 424 KAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
+ ++ F+EM K V Y+ +I Y RSGRL A++L MK +G PN Y SLI
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
+ + + L+ EM+ + P+ YT++I Y K G+ L E
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 544 IDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
++ +M+G +++ G + + +LL +M+ +G D Y+ +++ G L+A
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 202/464 (43%), Gaps = 29/464 (6%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVL 214
+ P TC+ L+ +R +F+ + V+ F +A+ + K V
Sbjct: 222 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+F K++ V + ++ +++ L C + F F+ + + Y +L
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDG---LGMCGRYDEAFM-FKEKMVERGMEPTLITYSILV 337
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSF---ASLHKVGEVEELLREAKSR 330
+ L + R+ +A + MTKKG + VY+ LI SF SL+K E+++L+ S+
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM---VSK 394
Query: 331 TKIKDPEVYLKLVIMYVE-------EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
Y L+ Y + E LL++ L + + C+LC+ +
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM---- 450
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
F +A+R +++ + PG ++I+ C+ +++KA +++ + KGF V
Sbjct: 451 ---FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF--VVDT 505
Query: 444 YSSMIVMYG--RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
+S +++G +G+L A ++ ++ RGC + YN+LI +K L + +E
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
M +R + PD +Y+ +I + E + +++ + NG + D +M+ K +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 562 IDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
++ + +M + + + +Y A+ +G A L+E
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 160/376 (42%), Gaps = 36/376 (9%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREA 327
+Y L +S + G +++A+E +M KG+ SS Y+TLI + + E LL+E
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
S + + ++ + + + L V M ++ +L +++G K
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 388 SAAVRAYEKLISQGY---------------EPGQ--------------------VTYASV 412
S A+ + + +++G+ E G+ V+Y ++
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
I+ C + ++A +EM ++G YS +I ++ A++ K G
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
P+V+ Y+ +ID + + + ++ ++EM + V P+ V Y +I AY ++G E
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
L + + G + A ++ S + ++++ L ++M+MEG + Y + + +
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Query: 593 EAGLQLQAKWLQESFH 608
+ G ++ + L H
Sbjct: 727 KLGQMVKVECLLREMH 742
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 143/331 (43%), Gaps = 20/331 (6%)
Query: 286 ALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL--KLV 343
AL+ F V+ KG+F S ++ SL + E ++ K P+VYL +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNIL--LTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAI 267
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
+ + +E+ +++ M++A V V++G + A EK++ +G E
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P +TY+ ++ R + A V +EM +KGF V+ Y+++I + +G L A+++
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
M +G YN+LI + + E+L EM ++ S+TS+I
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 524 AGEFETCTELFNEYRI-----NGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
F++ E + GG++ ++G+ K G+ + ++L +G
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL-----CKHGKHSKALELWFQFLNKGFV 502
Query: 579 LDQRLYQSAWNAFIEAGLQLQAKWLQESFHV 609
+D R + + EAG L E+F +
Sbjct: 503 VDTRTSNALLHGLCEAG------KLDEAFRI 527
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 144/385 (37%), Gaps = 51/385 (13%)
Query: 84 NPGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFI 143
+PG L + GL + K + ++Q L F + T ++ L K D
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG--FVVDTRTSNALLHGLCEAGKLDEA 524
Query: 144 LSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLN-----AFKSDSEVAVFAFGS 198
+ ++ + D + + LI C ++K A L+ K D+
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-C 583
Query: 199 ALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRN 258
L N NK+ + ++ K N ++ D YS +++ K + E + F E S+N
Sbjct: 584 GLFNMNKVE---EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 259 LRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKV 317
++ + + C S GR+S ALE M KGI S+ Y++LI + + +V
Sbjct: 641 VQPNTVVYNHLIRAYCRS----GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
E + L E R + +P V+ A+
Sbjct: 697 EEAKLLFEEM--RMEGLEPNVF---------------------------------HYTAL 721
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
++G+ K ++ S+ P ++TY +I Y R +A ++ EM +KG
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMK 462
+ Y I Y + G + A K
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 14/278 (5%)
Query: 91 NEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDF 150
N + G K +E AF + + R + +P+ T +I L K + + +D
Sbjct: 544 NTLISGCCGKKKLDE-AFMFLDEMVKRGL-KPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 151 KIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKS-DSEVAVFAFGSALRNYNKLHMF 209
K +LPD T S +I+ C + + + + + S + + + +R Y +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 210 RRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI 269
+ + E +K + +S Y+ +++ S + E LF E L + +
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH---- 717
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
Y L + GK G++ + R M K + + + Y+ +I +A V E LL E +
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDAD 366
+ + D Y + + Y+++ V+EA K +D
Sbjct: 778 EKGIVPDSITYKEFIYGYLKQG------GVLEAFKGSD 809
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 157/357 (43%), Gaps = 5/357 (1%)
Query: 245 ESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALE-YFRVMTKKGIFESSV 303
+S ++ E RN+ G + L L K G+ S+ALE +F+ + K + ++
Sbjct: 452 DSALRFVGEMLLRNMSPG----GGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRT 507
Query: 304 YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK 363
+ L+ K+ E + +E R + D Y L+ + L++ ++ M
Sbjct: 508 SNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYN 423
+K + ++ G A++ ++ G P TY+ +I+ C+ +
Sbjct: 568 KRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTE 627
Query: 424 KAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
+ ++ F+EM K V Y+ +I Y RSGRL A++L MK +G PN Y SLI
Sbjct: 628 EGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
+ + + L+ EM+ + P+ YT++I Y K G+ L E
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 544 IDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
++ +M+G +++ G + + +LL +M+ +G D Y+ +++ G L+A
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 202/464 (43%), Gaps = 29/464 (6%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVL 214
+ P TC+ L+ +R +F+ + V+ F +A+ + K V
Sbjct: 222 MFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVK 281
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+F K++ V + ++ +++ L C + F F+ + + Y +L
Sbjct: 282 LFSKMEEAGVAPNVVTFNTVIDG---LGMCGRYDEAFM-FKEKMVERGMEPTLITYSILV 337
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSF---ASLHKVGEVEELLREAKSR 330
+ L + R+ +A + MTKKG + VY+ LI SF SL+K E+++L+ S+
Sbjct: 338 KGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLM---VSK 394
Query: 331 TKIKDPEVYLKLVIMYVE-------EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
Y L+ Y + E LL++ L + + C+LC+ +
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLM---- 450
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
F +A+R +++ + PG ++I+ C+ +++KA +++ + KGF V
Sbjct: 451 ---FDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF--VVDT 505
Query: 444 YSSMIVMYG--RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
+S +++G +G+L A ++ ++ RGC + YN+LI +K L + +E
Sbjct: 506 RTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDE 565
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
M +R + PD +Y+ +I + E + +++ + NG + D +M+ K +
Sbjct: 566 MVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAER 625
Query: 562 IDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
++ + +M + + + +Y A+ +G A L+E
Sbjct: 626 TEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 160/376 (42%), Gaps = 36/376 (9%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREA 327
+Y L +S + G +++A+E +M KG+ SS Y+TLI + + E LL+E
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
S + + ++ + + + L V M ++ +L +++G K
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 388 SAAVRAYEKLISQGY---------------EPGQ--------------------VTYASV 412
S A+ + + +++G+ E G+ V+Y ++
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
I+ C + ++A +EM ++G YS +I ++ A++ K G
Sbjct: 547 ISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGM 606
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
P+V+ Y+ +ID + + + ++ ++EM + V P+ V Y +I AY ++G E
Sbjct: 607 LPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
L + + G + A ++ S + ++++ L ++M+MEG + Y + + +
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Query: 593 EAGLQLQAKWLQESFH 608
+ G ++ + L H
Sbjct: 727 KLGQMVKVECLLREMH 742
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 143/331 (43%), Gaps = 20/331 (6%)
Query: 286 ALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL--KLV 343
AL+ F V+ KG+F S ++ SL + E ++ K P+VYL +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNIL--LTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAI 267
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
+ + +E+ +++ M++A V V++G + A EK++ +G E
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGME 327
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P +TY+ ++ R + A V +EM +KGF V+ Y+++I + +G L A+++
Sbjct: 328 PTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI 387
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
M +G YN+LI + + E+L EM ++ S+TS+I
Sbjct: 388 KDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS 447
Query: 524 AGEFETCTELFNEYRI-----NGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
F++ E + GG++ ++G+ K G+ + ++L +G
Sbjct: 448 HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGL-----CKHGKHSKALELWFQFLNKGFV 502
Query: 579 LDQRLYQSAWNAFIEAGLQLQAKWLQESFHV 609
+D R + + EAG L E+F +
Sbjct: 503 VDTRTSNALLHGLCEAG------KLDEAFRI 527
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 144/385 (37%), Gaps = 51/385 (13%)
Query: 84 NPGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFI 143
+PG L + GL + K + ++Q L F + T ++ L K D
Sbjct: 467 SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG--FVVDTRTSNALLHGLCEAGKLDEA 524
Query: 144 LSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLN-----AFKSDSEVAVFAFGS 198
+ ++ + D + + LI C ++K A L+ K D+
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI-C 583
Query: 199 ALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRN 258
L N NK+ + ++ K N ++ D YS +++ K + E + F E S+N
Sbjct: 584 GLFNMNKVE---EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 259 LRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKV 317
++ + + C S GR+S ALE M KGI S+ Y++LI + + +V
Sbjct: 641 VQPNTVVYNHLIRAYCRS----GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRV 696
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
E + L E R + +P V+ A+
Sbjct: 697 EEAKLLFEEM--RMEGLEPNVF---------------------------------HYTAL 721
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
++G+ K ++ S+ P ++TY +I Y R +A ++ EM +KG
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMK 462
+ Y I Y + G + A K
Sbjct: 782 VPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 114/278 (41%), Gaps = 14/278 (5%)
Query: 91 NEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDF 150
N + G K +E AF + + R + +P+ T +I L K + + +D
Sbjct: 544 NTLISGCCGKKKLDE-AFMFLDEMVKRGL-KPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 151 KIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKS-DSEVAVFAFGSALRNYNKLHMF 209
K +LPD T S +I+ C + + + + + S + + + +R Y +
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 210 RRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI 269
+ + E +K + +S Y+ +++ S + E LF E L + +
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFH---- 717
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
Y L + GK G++ + R M K + + + Y+ +I +A V E LL E +
Sbjct: 718 YTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDAD 366
+ + D Y + + Y+++ V+EA K +D
Sbjct: 778 EKGIVPDSITYKEFIYGYLKQG------GVLEAFKGSD 809
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/443 (22%), Positives = 194/443 (43%), Gaps = 28/443 (6%)
Query: 157 PDGATCSKLIE-FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLV 215
P+ T + LI+ C R ++ K E ++ + S + + K R +
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
+E + D Y +++ SK + ++ F + L S R ++ L +
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSK----QGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 276 SLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAK------- 328
+ R EAL+ FR+M GI + +F ++ +V +E L EA
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPD------VATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK----DADVKVCDCMLCAVVNGFSKR 384
D Y L+ + + L++ + M+ AD+ VC+ V++ K
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN----VVIHLLFKC 614
Query: 385 RGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAY 444
A + + LI EP VTY ++I YC L + ++AE++FE ++ F V
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 445 SSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
+ +I + ++ + A+++ + M E+G KPN Y L+D + ++ KL+ EM+
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA-GIMVGVFSKVGQID 563
+ ++P VSY+ +I K G + T +F++ I+ ++ +A I++ + KVG++
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ-AIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 564 QLVKLLQDMKMEGTRLDQRLYQS 586
+ L + M G + D L ++
Sbjct: 794 EAALLYEHMLRNGVKPDDLLQRA 816
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 107/227 (47%), Gaps = 6/227 (2%)
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
C ++NGF KR A ++ + +G EP + Y+++I+ Y + K+F +
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
KG VV +SS I +Y +SG L A + +M +G PNV Y LI ++ +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+ ++ ++ +R + P V+Y+S+I + K G + L+ + G D + G++V
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS---AW---NAFIEA 594
SK G + ++ M + RL+ ++ S W N F EA
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 132/300 (44%), Gaps = 5/300 (1%)
Query: 304 YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK 363
+ TLI F ++ +L + + R D Y L+ Y + +L ++
Sbjct: 289 FCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQAL 348
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYN 423
VK+ + + ++ + K + A Y++++ QG P VTY +I C+ +
Sbjct: 349 HKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIY 408
Query: 424 KAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
+A ++ ++ ++G + +V YSS+I + + G LR+ L M + G P+V +Y L+
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLV 468
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
D ++ + + +M + + + V + S+I + + F+ ++F I G
Sbjct: 469 DGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIK 528
Query: 544 IDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIE-----AGLQL 598
D A ++ V G++++ + L M G D Y + +AF + GLQL
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/510 (20%), Positives = 210/510 (41%), Gaps = 23/510 (4%)
Query: 104 EELAFDYYQRL-KDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATC 162
E+ A D +Q + + RP RP + + R K++D +L + + ++ + + T
Sbjct: 53 EDDAVDLFQEMTRSRP--RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110
Query: 163 SKLIEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSAL-------RNYNKLHMFRRTVL 214
S +I C R RK +A + + K E F + + R L + R V
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV- 169
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
++ ++ + + K+ D V L + ++ G + V+C
Sbjct: 170 ---EMGHKPTLITLNALVNGLCLNGKVSD---AVLLIDRMVETGFQPNEVTYGPVLKVMC 223
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
+S G+ + A+E R M ++ I ++ YS +I + L E + +
Sbjct: 224 KS----GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D +Y L+ + + +++ M + A+++ F K A
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
++++I +G P VTY S+I+ +C+ +Q +KA + + M KG + ++ +I Y +
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
+ + + ++L KM RG + YN+LI L ++L+ EM R+V PD VS
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
Y ++ GE E E+F + + +D + I++ ++D L +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 574 MEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
++G + D + Y + G +A L
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLL 549
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 185/434 (42%), Gaps = 36/434 (8%)
Query: 185 FKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDS------RGYSHIMEAY 238
K D V +F + R +L F R V + K +VLD +G +H +
Sbjct: 51 IKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTL 110
Query: 239 SKLDDC--------------ESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVS 284
S + +C ++KL +E D+ + I G+ E GRVS
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYE------PDTVTFSTLINGLCLE-----GRVS 159
Query: 285 EALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEE--LLREAKSRTKIKDPEV-YLK 341
EALE M + G TL L G+V + LL + T + EV Y
Sbjct: 160 EALELVDRMVEMG--HKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
++ + + +E++ M++ +K+ +++G K A + ++ +G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
++ + Y ++I +C +++ K+ +M ++ VVA+S++I + + G+LR A
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
+L +M +RG P+ Y SLID +E L + + + M + P+ ++ +I Y
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
KA + ELF + + G V D ++ F ++G+++ +L Q+M R D
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDI 457
Query: 582 RLYQSAWNAFIEAG 595
Y+ + + G
Sbjct: 458 VSYKILLDGLCDNG 471
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 161/370 (43%), Gaps = 11/370 (2%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ K++ + LD+ YS I++ K ++ LF+E E + + IY L
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI----IIYTTLI 289
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
GR + + R M K+ I V +S LI F K+ E EEL +E R
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D Y L+ + +E+ L+K +++ M ++NG+ K +
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+ K+ +G VTY ++I +C L + A+++F+EM + +V+Y ++
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN---EMKRRKVAPD 510
+G A+++ K+++ + ++ +YN +I HG N +++ W+ + + V PD
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIII--HGM-CNASKVDDAWDLFCSLPLKGVKPD 526
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
+Y MIG K G LF + +G + I++ G + KL++
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586
Query: 571 DMKMEGTRLD 580
++K G +D
Sbjct: 587 EIKRCGFSVD 596
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 112/232 (48%)
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
L ++N + R S A A K+I GYEP VT++++IN C + ++A ++ + M
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+ G ++ ++++ +G++ +A+ L+ +M E G +PN Y ++ + +
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+L +M+ RK+ D V Y+ +I K G + LFNE I G D + ++
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
F G+ D KLL+DM D + + + F++ G +A+ L +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHK 341
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/402 (19%), Positives = 154/402 (38%), Gaps = 79/402 (19%)
Query: 96 GLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHV 155
GL +D + AF+ + ++ + F+ + +IR +WD + D +
Sbjct: 256 GLCKDGSLDN-AFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 156 LPDGATCSKLIEFCIRQRKFKIAE-------------------TLLNAFKSDSEV----- 191
PD S LI+ +++ K + AE +L++ F ++++
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 192 ------------AVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYS 239
+ F + Y K ++ + +F K+ VV D+ Y+ +++ +
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 240 KLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI- 298
+L E +LF E SR +R Y +L + L G +ALE F + K +
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVS----YKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 299 FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEV 358
+ +Y+ +I + KV + +L + L + V+ D+ KT +
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDL---------------FCSLPLKGVKPDV--KTYNI 532
Query: 359 VEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCR 418
++ G K+ S A + K+ G+ P TY +I A+
Sbjct: 533 ------------------MIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLG 574
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
K+ K+ EE+++ GF + M+V GRL+ +
Sbjct: 575 EGDATKSAKLIEEIKRCGF-SVDASTVKMVVDMLSDGRLKKS 615
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 207/461 (44%), Gaps = 11/461 (2%)
Query: 154 HVLPDGATCSKLIEFCIRQRKFKIAETLLNAFK-SDSEVAVFAFGSALRNYNKLHMFRRT 212
+V+P+G T +I+ + K ++A L + E + + + + ++ +
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEV 488
Query: 213 VLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGV 272
+ + + S V LD Y+ +++ + K D E+ + E + R + + Y V
Sbjct: 489 KGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMP----WDVVSYNV 544
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLR--EAKSR 330
L + K G+V Y + M +KGI E + +T S K G+ E +L+ +
Sbjct: 545 LISGMLKFGKVGADWAY-KGMREKGI-EPDI-ATFNIMMNSQRKQGDSEGILKLWDKMKS 601
Query: 331 TKIKDPEVYLKLVI-MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
IK + +V+ M E +E+ + ++ M ++ ++ SK + A
Sbjct: 602 CGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADA 661
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
+ +E L+S G + + Y ++I C+L KA V +ME +GF V ++S++
Sbjct: 662 IFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMH 721
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
Y +R A+ + M E G PNV YN++I +++++K +EMK R + P
Sbjct: 722 GYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRP 781
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
D +Y ++I +K G + ++ E +G V + +++ F+ VG++ Q +LL
Sbjct: 782 DDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELL 841
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESFHVS 610
++M G + Y + + + +W +++ +++
Sbjct: 842 KEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLA 882
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 203/480 (42%), Gaps = 49/480 (10%)
Query: 157 PDGATCSKLIEFCIRQRKFKI---AETLLNAFKSDSEVAVFAFGSALRNYNKL-HMFR-- 210
PD A + + F++ E L A ++ S + F R +N L H F
Sbjct: 47 PDLAPIKTRVYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVN 106
Query: 211 -----RTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKR 264
+ L++ K+ + V D + ++ ++ K+ + L +R + D+
Sbjct: 107 GLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLR---NRVISIDTVT 163
Query: 265 YLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEEL 323
Y I G LCE G EA ++ M K GI +V Y+TLI F + + L
Sbjct: 164 YNTVISG-LCEH----GLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKAL 218
Query: 324 LREAKSRTKIKDP-------------EVYLKLVIMYVEEDLLE------------KTLE- 357
+ E I E Y +V+ + D++ K LE
Sbjct: 219 VDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEG 278
Query: 358 --VVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINA 415
++ M++ V +V+ K + A+ Y +++ +G V Y +++
Sbjct: 279 GLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDG 338
Query: 416 YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN 475
+ +AEK F+ + + VV Y++++ ++G L +A ++ +M E+ PN
Sbjct: 339 LFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
V Y+S+I+ + ++ L + L +M+ + V P+ +Y ++I KAG+ E EL
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 458
Query: 536 EYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
E R+ G + + +V ++G+I ++ L++DM +G LDQ Y S + F + G
Sbjct: 459 EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGG 518
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 155/373 (41%), Gaps = 46/373 (12%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVL 214
+LPD + + LI+ + F A+ L++ SE+ + L +Y LH
Sbjct: 192 ILPDTVSYNTLIDGFCKVGNFVRAKALVDEI---SELNLITHTILLSSYYNLHAIEEA-- 246
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ + + D +S I+ K L E E ++ + Y L
Sbjct: 247 -YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNH----VTYTTLV 301
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
+SL K AL + M +GI + VY+ L+ L K G+ LREA+ K+
Sbjct: 302 DSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM---DGLFKAGD----LREAEKTFKM 354
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+ + V+ Y A+V+G K S+A
Sbjct: 355 LLEDNQVPNVVTYT----------------------------ALVDGLCKAGDLSSAEFI 386
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+++ + P VTY+S+IN Y + +A + +ME + Y ++I +
Sbjct: 387 ITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFK 446
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
+G+ A++L +M+ G + N ++ ++L++ R +++++ L +M + V D+++
Sbjct: 447 AGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQIN 506
Query: 514 YTSMIGAYSKAGE 526
YTS+I + K G+
Sbjct: 507 YTSLIDVFFKGGD 519
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/442 (21%), Positives = 178/442 (40%), Gaps = 42/442 (9%)
Query: 191 VAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKL 250
+ V A + ++++ KL M + V+ K+K N + Y+ +M +S ++
Sbjct: 185 MTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERV 244
Query: 251 FHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLIC 309
F ES ++ Y + + K G+ +A+E R M +G + Y T+I
Sbjct: 245 FEVMESGRIKPDI----VTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQ 300
Query: 310 SFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKV 369
+ + G L +E + P + ++ +E L + V E M K
Sbjct: 301 ACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKP 360
Query: 370 CDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
+ +++G++K A+R ++I +G++P VTY+ V+N C+ + +A F
Sbjct: 361 NVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYF 420
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID----- 484
G + YSS+I G++GR+ A +L +M E+GC + + YN+LID
Sbjct: 421 HTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 485 -----------------------------MHGREKNLRQLE--KLWNEMKRRKVAPDKVS 513
+ G K R E KLW+ M + + P
Sbjct: 481 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAAC 540
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
+ ++ +G+ ++ +E G ++D A M+ K G+I + KL +
Sbjct: 541 FRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGIT 599
Query: 574 MEGTRLDQRLYQSAWNAFIEAG 595
G + R+ NA + G
Sbjct: 600 ERGREVPGRIRTVMINALRKVG 621
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/478 (20%), Positives = 198/478 (41%), Gaps = 41/478 (8%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
+ P+ TL ++ K+ +++ + + P+ T + LI K A
Sbjct: 146 YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAV 205
Query: 180 TLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAY 238
L++ + + +F +G+ + K + + +K++ + D Y+ I++A
Sbjct: 206 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDAL 265
Query: 239 SKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI 298
+ + LF E +++ +R + + LC GR S+A M ++ I
Sbjct: 266 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY----GRWSDASRLLSDMIERKI 321
Query: 299 FESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE 357
+ V +S LI +F K+ E E+L E R+ DP+++
Sbjct: 322 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI--DPDIF------------------ 361
Query: 358 VVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC 417
+++NGF A +E +IS+ P VTY ++I +C
Sbjct: 362 ---------------TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 406
Query: 418 RLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVW 477
+ + + ++F EM Q+G V Y+++I ++G A K+ KM G P++
Sbjct: 407 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 466
Query: 478 VYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEY 537
Y+ L+D + L + ++ +++ K+ PD +Y MI KAG+ E +LF
Sbjct: 467 TYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 526
Query: 538 RINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ G + + M+ F + G ++ L ++MK +GT + Y + A + G
Sbjct: 527 SLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/507 (19%), Positives = 213/507 (42%), Gaps = 10/507 (1%)
Query: 100 DPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDG 159
D K ++ + + ++ RP+ P ++ + + K+D ++S+ E + + D
Sbjct: 58 DLKLDDAVDLFGEMVQSRPL--PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDL 115
Query: 160 ATCSKLIEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEK 218
+ + LI R+ + +A +L K E + S L Y V + ++
Sbjct: 116 YSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 219 LKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLG 278
+ ++ ++ ++ + V L +R + G + LC
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC---- 231
Query: 279 KCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
K G + AL + M +KG E+ V Y+T+I + + V + L E ++ +
Sbjct: 232 KRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEK 396
Y L+ ++ M + + A+++ F K A + Y++
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
+I + +P TY+S+IN +C + ++A+ +FE M K VV Y+++I + ++ R
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
+ M+L +M +RG N YN+LI + + +K++ +M V PD ++Y+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 517 MIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
++ K G+ E +F + + D IM+ K G+++ L + ++G
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530
Query: 577 TRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+ + +Y + + F GL+ +A L
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADAL 557
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 157/394 (39%), Gaps = 55/394 (13%)
Query: 116 DRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKF 175
D RP T +IR L + +W + D + P+ T S LI+ +++ K
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 176 KIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHI 234
AE L + K + +F + S + + +FE + S + Y+ +
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401
Query: 235 MEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMT 294
++ + K E ++LF E R L + Y L + L + G A + F+ M
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNT----VTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 295 KKGIFESSV-YSTL---ICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEED 350
G+ + YS L +C + L K V E L+++K +P++Y ++
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK-----MEPDIYTYNIM------ 506
Query: 351 LLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYA 410
+E M C V +G+ + L +G +P + Y
Sbjct: 507 --------IEGM---------CKAGKVEDGWD----------LFCSLSLKGVKPNVIIYT 539
Query: 411 SVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER 470
++I+ +CR +A+ +F EM++ G Y+++I R G + +L+ +M+
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 471 GCKPNVWVYNSLIDM--HGREKNLRQLEKLWNEM 502
G + + +I+M GR LEK + EM
Sbjct: 600 GFVGDASTISMVINMLHDGR------LEKSYLEM 627
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 177/374 (47%), Gaps = 11/374 (2%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
+S ++ +K + + V+ LFH E + Y ++ L +C R AL
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS----YNIVINCLCRCSRFVIALSVV 127
Query: 291 RVMTKKGIFESSVY--STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
M K G +E V S+LI F ++V + +L+ + + D +Y ++ +
Sbjct: 128 GKMMKFG-YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
L+ +E+ + M+ V+ ++V G +S A R ++ + P +T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
+ +VI+ + + ++++A K++EEM ++ D V Y+S+I GR+ A +++ M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
+GC P+V YN+LI+ + K + + KL+ EM +R + D ++Y ++I Y +AG +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 529 TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAW 588
E+F+ R++ R + ++ G+ ++++ + L ++M+ LD Y
Sbjct: 367 AAQEIFS--RMDSRPNIRTYSILLYGLCMN-WRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 589 NAFIEAGLQLQAKW 602
+ + G ++ W
Sbjct: 424 HGMCKIG-NVEDAW 436
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 142/313 (45%), Gaps = 47/313 (15%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREA 327
IY + + K G V++A+E F M + G+ +V Y++L+ + + L+R+
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK----DADVKVCDCMLCAVVNGFSK 383
R + + + ++ ++V+E + +++ E M D DV + +++NG
Sbjct: 236 VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN----SLINGLCM 291
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
A + + ++++G P VTY ++IN +C+ + ++ K+F EM Q+G +
Sbjct: 292 HGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTIT 351
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL--------------------- 482
Y+++I Y ++GR A ++ ++M R PN+ Y+ L
Sbjct: 352 YNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 483 ------------IDMHGREK--NLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
I +HG K N+ L+ + + + PD VSYT+MI + + +++
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWD 468
Query: 529 TCTELFNEYRING 541
L+ + + +G
Sbjct: 469 KSDLLYRKMQEDG 481
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/435 (18%), Positives = 176/435 (40%), Gaps = 42/435 (9%)
Query: 110 YYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFC 169
+ + ++ RP+ P V+ + + K +D ++S+ ++ + D + + +I
Sbjct: 57 FCKMIQSRPL--PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 170 IRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDS 228
R +F IA +++ K E V S + + + + + + K++ D
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 229 RGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLCESLGKCGRVSEAL 287
Y+ I++ K+ V+LF E +R D+ Y + G+ C GR S+A
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS-----GRWSDAA 229
Query: 288 EYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMY 346
R M + I + + ++ +I F K E +L E R D Y L+
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 347 VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQ 406
+++ ++++ M ++NGF K + + + ++ +G
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKG-----------------FDKCVVAYSSM-- 447
+TY ++I Y + + + A+++F M+ + +K +V + +M
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 448 -----------IVMYG--RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQ 494
IV++G + G + +A L + +G KP+V Y ++I R++ +
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 495 LEKLWNEMKRRKVAP 509
+ L+ +M+ + P
Sbjct: 470 SDLLYRKMQEDGLLP 484
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 3/218 (1%)
Query: 381 FSKRR---GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
FS +R + + K+I P V ++ V++ + Y+ +F ME G
Sbjct: 41 FSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGI 100
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
+ +Y+ +I R R A+ +V KM + G +P+V +SLI+ + +
Sbjct: 101 GHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID 160
Query: 498 LWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFS 557
L ++M+ PD V Y ++I K G ELF+ +G D +V
Sbjct: 161 LVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLC 220
Query: 558 KVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
G+ +L++DM M + + + + F++ G
Sbjct: 221 CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEG 258
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 107/220 (48%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++++GF A ++ GYEP V Y ++I+ C+ + N A ++ EME+K
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G VV Y++++ SGR +A +++ M +R P+V + +LID+ ++ NL +
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
++L+ EM + V P+ V+Y S+I G + F+ G + ++
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
F K +D+ +KL Q M EG D Y + + + + G
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 147/311 (47%), Gaps = 5/311 (1%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREA 327
+Y L + L K G ++ ALE M KKG+ V Y+TL+ + + +LR+
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
R+ D + L+ ++V++ L++ E+ + M + V + +++NG
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A + ++ + S+G P VTY ++I+ +C+ ++ K+F+ M +GF+ + Y+++
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTL 357
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKL--WNEMKRR 505
I Y + G+LR A+ + M R P++ + I +HG N L +++M+
Sbjct: 358 IHGYCQVGKLRVALDIFCWMVSRRVTPDIITH--CILLHGLCVNGEIESALVKFDDMRES 415
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
+ V+Y MI KA + E ELF + G D IM+ K G +
Sbjct: 416 EKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 475
Query: 566 VKLLQDMKMEG 576
+L++ MK EG
Sbjct: 476 DELIRRMKEEG 486
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 153/368 (41%), Gaps = 15/368 (4%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEF-ESRNLRDSKRYLGQI-----------YGVLCESLG 278
+S ME Y D S L H F L + LG++ +G L
Sbjct: 93 FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152
Query: 279 KCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
R+ +A +M K G +E +V Y+TLI ++ ELL E + + D
Sbjct: 153 LVNRIGDAFSLVILMVKSG-YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEK 396
Y L+ ++ M + A+++ F K+ A Y++
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
+I +P VTY S+IN C + A+K F+ M KG VV Y+++I + +
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
+ MKL +M G +++ YN+LI + + LR ++ M R+V PD +++
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 517 MIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
++ GE E+ F++ R + I IM+ K ++++ +L + +EG
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 577 TRLDQRLY 584
+ D R Y
Sbjct: 452 VKPDARTY 459
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 105/228 (46%), Gaps = 7/228 (3%)
Query: 381 FSKRRGFSAAVRAYEKLI--SQ-----GYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
F++ +A +R YE +I SQ G ++ +I+ +CR S+ + A V +M
Sbjct: 74 FTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMM 133
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+ G++ +V + S++ + R+ +A LV M + G +PNV VYN+LID + L
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+L NEM+++ + D V+Y +++ +G + + + D ++
Sbjct: 194 IALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALI 253
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
VF K G +D+ +L ++M + Y S N G AK
Sbjct: 254 DVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 183/455 (40%), Gaps = 22/455 (4%)
Query: 96 GLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHV 155
G + E+ +++ + +P+ P ++ ++++ ++ S+ ++Y +
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPL--PSIVDFTRLLTATANLRRYETVIYFSQKMELYGI 102
Query: 156 LPDGATCSKLIEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNY---NKL-HMFR 210
D + + LI R + A ++L K E ++ FGS L + N++ F
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 211 RTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIY 270
+L+ + +VV+ Y+ +++ K + ++L +E E + L +
Sbjct: 163 LVILMVKSGYEPNVVV----YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 271 GVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKS 329
LC S GR S+A R M K+ I V ++ LI F + E +EL +E
Sbjct: 219 TGLCYS----GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQ 274
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
+ + Y ++ L + + M +++GF K R
Sbjct: 275 SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
++ ++++ +G+ TY ++I+ YC++ + A +F M + ++ + ++
Sbjct: 335 GMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR---RK 506
+G + +A+ M+E + YN +I HG K ++EK W R
Sbjct: 395 GLCVNGEIESALVKFDDMRESEKYIGIVAYNIMI--HGLCKA-DKVEKAWELFCRLPVEG 451
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
V PD +YT MI K G EL + G
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/524 (19%), Positives = 215/524 (41%), Gaps = 14/524 (2%)
Query: 86 GTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILS 145
G+ + E L D K ++ + +K RP+ P ++ + + KK+D ++S
Sbjct: 49 GSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPL--PSIVEFNKLLSAIAKMKKFDVVIS 106
Query: 146 VSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNYN 204
+ E + ++ T + LI R+ + +A LL K E ++ S L Y
Sbjct: 107 LGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 166
Query: 205 KLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKR 264
V + +++ D+ ++ ++ + V L R + +
Sbjct: 167 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL- 225
Query: 265 YLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEEL 323
YGV+ L K G AL M I + +++T+I S V + L
Sbjct: 226 ---VTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 324 LREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
+E +++ + Y L+ +++ M + + A+++ F K
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
F A + Y+ +I + +P TY S++N +C + +KA+++FE M K VV
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
Y+++I + +S R+ + +L +M RG + Y +LI + + +K++ +M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
V PD ++Y+ ++ G+ E E+F+ + + +D + M+ K G++D
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 564 QLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESF 607
L + ++G + + Y + + + LQE++
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLC------SKRLLQEAY 560
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 184/445 (41%), Gaps = 42/445 (9%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLV 215
PD T + LI K A L++ + + + +G + K + +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
K+++ + D ++ I+++ K + + LF E E++ +R + + LC
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 276 SLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIK 334
GR S+A + M +K I + V ++ LI +F K E E+L + R+
Sbjct: 308 Y----GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK----------- 383
D Y LV + D L+K ++ E M D ++ GF K
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 384 ----RRGFSA--------------------AVRAYEKLISQGYEPGQVTYASVINAYCRL 419
RG A + +++++S G P +TY+ +++ C
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 420 SQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVY 479
+ KA +VF+ M++ + Y++MI ++G++ + L + +G KPNV Y
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 480 NSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI 539
N++I ++ L++ L +MK P+ +Y ++I A+ + G+ EL E R
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Query: 540 NGGVIDRAMAGIMVGVFSKVGQIDQ 564
V D + G++ + G++D+
Sbjct: 604 CRFVGDASTIGLVANMLHD-GRLDK 627
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/311 (22%), Positives = 136/311 (43%), Gaps = 37/311 (11%)
Query: 284 SEALEYFRVMTKKGIF--ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
+ AL +F + ++ F + Y+T++ + + GE+ +LL E + Y +
Sbjct: 340 ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNR 399
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
L+ Y + L++ + V M++A G
Sbjct: 400 LIHSYGRANYLKEAMNVFNQMQEA-----------------------------------G 424
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
EP +VTY ++I+ + + + A +++ M++ G YS +I G++G L A
Sbjct: 425 CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAH 484
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
+L +M +GC PN+ +N +I +H + +N KL+ +M+ PDKV+Y+ ++
Sbjct: 485 RLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVL 544
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
G E +F E + V D + G++V ++ K G +D+ + Q M G R +
Sbjct: 545 GHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNV 604
Query: 582 RLYQSAWNAFI 592
S + F+
Sbjct: 605 PTCNSLLSTFL 615
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 120/259 (46%), Gaps = 1/259 (0%)
Query: 264 RYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEE 322
++ G Y + +LG+ + E + M + G ++V Y+ LI S+ + + E
Sbjct: 356 KHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMN 415
Query: 323 LLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFS 382
+ + + D Y L+ ++ + L+ +++ + M++A + ++N
Sbjct: 416 VFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLG 475
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
K AA R + +++ QG P VT+ +I + + Y A K++ +M+ GF V
Sbjct: 476 KAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKV 535
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
YS ++ + G G L A + A+M+ + P+ VY L+D+ G+ N+ + + + M
Sbjct: 536 TYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM 595
Query: 503 KRRKVAPDKVSYTSMIGAY 521
+ + P+ + S++ +
Sbjct: 596 LQAGLRPNVPTCNSLLSTF 614
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 60/128 (46%)
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
++ G K + Y +++ GR K ++ KL +EM R P+ V+Y +I +Y +A
Sbjct: 351 RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYL 410
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
+ +FN+ + G DR ++ + +K G +D + + Q M+ G D Y
Sbjct: 411 KEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVI 470
Query: 588 WNAFIEAG 595
N +AG
Sbjct: 471 INCLGKAG 478
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 143/332 (43%), Gaps = 4/332 (1%)
Query: 277 LGKCGR--VSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
+G C R + A + F M KG + V Y+ LI ++ E +L + K
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
Y L+ + + L +V+ M++ +K +++ + F A
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+++ +G P +TY ++IN YC+ A V E ME + Y+ +I Y +
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
S + AM ++ KM ER P+V YNSLID R N +L + M R + PD+ +
Sbjct: 441 SN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
YTSMI + K+ E +LF+ G + M ++ + K G++D+ +L+ M
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 574 MEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
+ + + + + G +A L+E
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEE 591
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/437 (21%), Positives = 180/437 (41%), Gaps = 39/437 (8%)
Query: 194 FAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHE 253
F + S + Y + VF ++ + Y+H++ + + LF +
Sbjct: 254 FTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVK 313
Query: 254 FESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFA 312
+ + R Y VL +SL R SEAL + M + GI + Y+ LI S
Sbjct: 314 MKDDECFPTVR----TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC 369
Query: 313 SLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK---- 368
S K + ELL + + + + Y L+ Y + ++E ++VVE M+ +
Sbjct: 370 SQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTR 429
Query: 369 -------------------VCDCML-----------CAVVNGFSKRRGFSAAVRAYEKLI 398
V + ML ++++G + F +A R +
Sbjct: 430 TYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 399 SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLR 458
+G P Q TY S+I++ C+ + +A +F+ +EQKG + VV Y+++I Y ++G++
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 459 NAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
A ++ KM + C PN +N+LI + L++ L +M + + P + T +I
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
K G+F+ F + +G D + + + G++ ++ M+ G
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVS 669
Query: 579 LDQRLYQSAWNAFIEAG 595
D Y S + + G
Sbjct: 670 PDLFTYSSLIKGYGDLG 686
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 177/437 (40%), Gaps = 43/437 (9%)
Query: 107 AFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLI 166
A D + ++KD F P T +I+ L ++ L++ ++ + + P+ T + LI
Sbjct: 307 AMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 167 EFCIRQRKFKIAETLLNAFKSDSEVA-VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVV 225
+ Q KF+ A LL + V + + + Y K M V V E ++S +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 226 LDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSE 285
++R Y+ +++ Y K + +++ L E + L D Y I G C S G
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQ-CRS----GNFDS 480
Query: 286 ALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVI 344
A +M +G+ Y+++I S +V E +L + K +P V +
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ--KGVNPNV-----V 533
Query: 345 MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEP 404
MY A+++G+ K A EK++S+ P
Sbjct: 534 MYT----------------------------ALIDGYCKAGKVDEAHLMLEKMLSKNCLP 565
Query: 405 GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLV 464
+T+ ++I+ C + +A + E+M + G V + +I + G +A
Sbjct: 566 NSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRF 625
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
+M G KP+ Y + I + RE L E + +M+ V+PD +Y+S+I Y
Sbjct: 626 QQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDL 685
Query: 525 GEFETCTELFNEYRING 541
G+ ++ R G
Sbjct: 686 GQTNFAFDVLKRMRDTG 702
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+VNG+ K A + K++ G +P TY S+I YC+ + A KVF EM KG
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI-DMHGREKNLRQL 495
+ VAY+ +I + R+ AM L KMK+ C P V Y LI + G E+ L
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
L EM+ + P+ +YT +I + +FE EL + G + + ++
Sbjct: 344 -NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQ 597
+ K G I+ V +++ M+ + R Y + ++ +
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH 444
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/414 (18%), Positives = 162/414 (39%), Gaps = 39/414 (9%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+F K+K + R Y+ ++++ + + L E E ++ + Y VL
Sbjct: 310 LFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI----HTYTVLI 365
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
+SL + +A E M +KG+ + + Y+ LI + + + +++ +SR
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 334 KDPEVYLKLVIMYVEEDL------LEKTLE----------------------------VV 359
+ Y +L+ Y + ++ L K LE ++
Sbjct: 426 PNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 360 EAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRL 419
M D + ++++ K + A ++ L +G P V Y ++I+ YC+
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 420 SQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVY 479
+ ++A + E+M K + ++++I G+L+ A L KM + G +P V
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 480 NSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI 539
LI ++ + + +M PD +YT+ I Y + G ++ + R
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 540 NGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIE 593
NG D ++ + +GQ + +L+ M+ G Q + S +E
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/439 (18%), Positives = 163/439 (37%), Gaps = 52/439 (11%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVA-VFAFGSALRNYNKLHMFRRTV 213
VLPD T + LI+ R F A LL+ V + + S + + K
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRN-LRDSKRYLGQIYG- 271
+F+ L+ V + Y+ +++ Y K + + + S+N L +S + I+G
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 272 -----------------------------VLCESLGKCGRVSEALEYFRVMTKKGI-FES 301
+L L K G A F+ M G ++
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 302 SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEA 361
Y+T I ++ ++ + E+++ + + D Y L+ Y + +V++
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 362 MKDADVKVCDCMLCAVVN-----GFSKRRG-------------FSAAVRAYEKLISQGYE 403
M+D + +++ + K++G F V EK++
Sbjct: 698 MRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT 757
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQ-KGFDKCVVAYSSMIVMYGRSGRLRNAMK 462
P +Y +I C + AEKVF+ M++ +G + +++++ + + A K
Sbjct: 758 PNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAK 817
Query: 463 LVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYS 522
+V M G P + LI ++ + ++ + + D++++ +I
Sbjct: 818 VVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVG 877
Query: 523 KAGEFETCTELFNEYRING 541
K G E ELFN NG
Sbjct: 878 KQGLVEAFYELFNVMEKNG 896
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 179/426 (42%), Gaps = 39/426 (9%)
Query: 121 RPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIR-QRKFKIAE 179
RP T +I + + D L E ++ + P+ AT + R K E
Sbjct: 247 RPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFE 306
Query: 180 TLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYS 239
L+ + DS + + + L + M + T K+ + DS ++ M
Sbjct: 307 VLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLL 366
Query: 240 KLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIF 299
K D ++F F SR ++ + G Y VL ++L R SE Y + M G+
Sbjct: 367 KGHDLVETCRIFDGFVSRGVKPG--FNG--YLVLVQALLNAQRFSEGDRYLKQMGVDGLL 422
Query: 300 ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVV 359
SSVYS V + L +A+ +I++ ++L
Sbjct: 423 -SSVYS-----------YNAVIDCLCKAR---RIENAAMFLT------------------ 449
Query: 360 EAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRL 419
M+D + ++G+S R EKL+ G++P +T++ +IN CR
Sbjct: 450 -EMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRA 508
Query: 420 SQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVY 479
+ A F+EM + G + + Y+ +I +G ++KL AKMKE G P+++ Y
Sbjct: 509 KEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAY 568
Query: 480 NSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI 539
N+ I + + +++ E+L M R + PD +Y+++I A S++G E+F+
Sbjct: 569 NATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628
Query: 540 NGGVID 545
+G V D
Sbjct: 629 HGCVPD 634
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/424 (19%), Positives = 169/424 (39%), Gaps = 40/424 (9%)
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVL 273
L F++++S+ D Y+ ++ K + ++L + E R + Y +L
Sbjct: 201 LKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVF----TYTIL 256
Query: 274 CESLGKCGRVSEALEYFRVMTKK--------------GIFES----SVYSTLICSF---A 312
+ GRV EAL+ +M + GIF + L+ +
Sbjct: 257 IDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDS 316
Query: 313 SLHKVG---------------EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE 357
+L +VG E + LR+ R I D + + ++ L +T
Sbjct: 317 NLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCR 376
Query: 358 VVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC 417
+ + VK +V + FS R +++ G +Y +VI+ C
Sbjct: 377 IFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLC 436
Query: 418 RLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVW 477
+ + A EM+ +G +V +++ + Y G ++ ++ K+ G KP+V
Sbjct: 437 KARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVI 496
Query: 478 VYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEY 537
++ +I+ R K ++ + EM + P++++Y +I + G+ + +LF +
Sbjct: 497 TFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM 556
Query: 538 RINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQ 597
+ NG D + F K+ ++ + +LL+ M G + D Y + A E+G +
Sbjct: 557 KENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRE 616
Query: 598 LQAK 601
+A+
Sbjct: 617 SEAR 620
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVIN 414
++E+++ ++D+ ++ D ++C ++ + + + ++ G +P Y +VI+
Sbjct: 129 SMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVID 188
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKP 474
A + + + A F++M G Y+ +I + G + A++LV +M++ G +P
Sbjct: 189 ALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRP 248
Query: 475 NVWVYNSLID---MHGR-EKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
NV+ Y LID + GR ++ L+QLE M+ RK+ P++ + + +
Sbjct: 249 NVFTYTILIDGFLIAGRVDEALKQLEM----MRVRKLNPNEATIRTFV 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 86/201 (42%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
AV++ K R A ++ +G P VT+ + ++ Y K V E++
Sbjct: 430 AVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH 489
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
GF V+ +S +I R+ +++A +M E G +PN YN LI + +
Sbjct: 490 GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRS 549
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
KL+ +MK ++PD +Y + I ++ K + + EL G D ++
Sbjct: 550 VKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKA 609
Query: 556 FSKVGQIDQLVKLLQDMKMEG 576
S+ G+ + ++ ++ G
Sbjct: 610 LSESGRESEAREMFSSIERHG 630
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
AV++ K A ++++ S G +P + TY +I+ C+ ++A ++ ++MEQ+
Sbjct: 185 AVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQE 244
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHG 487
G V Y+ +I + +GR+ A+K + M+ R PN + + HG
Sbjct: 245 GNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV--HG 294
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 135/309 (43%), Gaps = 37/309 (11%)
Query: 286 ALEYFRVMTKKGIF--ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
AL +F + ++ F + Y+T++ + + G + +LL E + Y +L+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
Y + L + + V M++A G +
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEA-----------------------------------GCK 431
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P +VTY ++I+ + + + A +++ M+ G YS +I G++G L A KL
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+M ++GC PN+ YN ++D+H + +N + KL+ +M+ PDKV+Y+ ++
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 524 AGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRL 583
G E +F E + + D + G++V ++ K G +++ + Q M G R +
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 584 YQSAWNAFI 592
S + F+
Sbjct: 612 CNSLLSTFL 620
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/349 (18%), Positives = 145/349 (41%), Gaps = 42/349 (12%)
Query: 206 LHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRY 265
L FR E L++ + +D+ + +++ +++D + + F+ + + ++
Sbjct: 309 LRRFRWGPAAEEALQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQ---PGFKH 362
Query: 266 LGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELL 324
G Y + +LG+ + + M + G ++V Y+ LI S+ + + E +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVF 422
Query: 325 REAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK--------VCDCM--- 373
+ + D Y L+ ++ + L+ +++ + M+ + + +C+
Sbjct: 423 NQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA 482
Query: 374 ---------LCAVVNG---------------FSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
C +V+ +K R + A++ Y + + G+EP +VTY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE 469
+ V+ +AE VF EM+QK + Y ++ ++G++G + A + M
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
G +PNV NSL+ R + + +L M + P +YT ++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
++ G K + Y +++ GR K + KL +EM R P+ V+Y +I +Y +A
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
+FN+ + G DR ++ + +K G +D + + Q M+ G D Y
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 588 WNAFIEAG 595
N +AG
Sbjct: 476 INCLGKAG 483
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 144/306 (47%), Gaps = 6/306 (1%)
Query: 304 YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK 363
Y++LI +A + V + +LR R ++ Y L+ Y ++ L+E+ V E +K
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYN 423
+ + M +++G+ + AVR ++ +I G S+IN YC+ Q
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 424 KAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
+AE++F M Y++++ Y R+G + A+KL +M ++ P V YN L+
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILL 443
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
+ R + LW M +R V D++S ++++ A K G+F +L+ G +
Sbjct: 444 KGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLL 503
Query: 544 IDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
D +M+ K+ ++++ ++L ++ + + + YQ+ + + + G L
Sbjct: 504 TDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVG------NL 557
Query: 604 QESFHV 609
+E+F V
Sbjct: 558 KEAFAV 563
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/468 (19%), Positives = 198/468 (42%), Gaps = 19/468 (4%)
Query: 144 LSVSEDFKIYHVLPDGATCSKLIE-FCIRQRKFKIAETLLNAFKSDS----EVAVFAFGS 198
L V + + V PD TCS ++ +C R + + ++ A +++S E+ V + S
Sbjct: 210 LHVYDQMISFEVSPDVFTCSIVVNAYC---RSGNVDKAMVFAKETESSLGLELNVVTYNS 266
Query: 199 ALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRN 258
+ Y + V + V + Y+ +++ Y K E +F + +
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 259 LRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKV 317
L + +YGVL + + G++ +A+ M + G+ +++ ++LI + ++
Sbjct: 327 LVADQ----HMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
E E++ + D Y LV Y +++ L++ + M +V +
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+ G+S+ F + ++ ++ +G +++ ++++ A +L +N+A K++E + +G
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
+ + MI + ++ A +++ + CKP V Y +L + + NL++
Sbjct: 503 LTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFA 562
Query: 498 LWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFS 557
+ M+R+ + P Y ++I K +L E R G A G ++ +
Sbjct: 563 VKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWC 622
Query: 558 KVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI------EAGLQLQ 599
+G ID+ +M +G L+ + N+ EA L LQ
Sbjct: 623 NIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ 670
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 134/299 (44%), Gaps = 40/299 (13%)
Query: 308 ICSFASLHKVGEV--EELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA 365
+C +L+ G V EL+R K + P V+ ++ +Y E+ L++ L V + M +
Sbjct: 127 LCELVALNHSGFVVWGELVRVFKEFSF--SPTVFDMILKVYAEKGLVKNALHVFDNMGNY 184
Query: 366 DVKVCDCMLCAVVNGFSKRRGFS-AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNK 424
++ + C + R+G + A+ Y+++IS P T + V+NAYCR +K
Sbjct: 185 G-RIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDK 243
Query: 425 AEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
A +E E SS+ G + NV YNSLI+
Sbjct: 244 AMVFAKETE-----------SSL-----------------------GLELNVVTYNSLIN 269
Query: 485 MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVI 544
+ ++ + ++ M R V+ + V+YTS+I Y K G E +F + V
Sbjct: 270 GYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA 329
Query: 545 DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
D+ M G+++ + + GQI V++ +M G R + + S N + ++G ++A+ +
Sbjct: 330 DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/415 (19%), Positives = 161/415 (38%), Gaps = 44/415 (10%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y+ +++ YS++ V+ L+ R + + L E+L K G +EA++ +
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCS----TLLEALFKLGDFNEAMKLW 494
Query: 291 RVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE 349
+ +G+ ++ + +I + KV E +E+L + Y L Y +
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 350 DLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
L++ V E M+ + M +++G K R + +L ++G P TY
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKG--------------------------------- 436
++I +C + +KA EM +KG
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK-----PNVWVYNSLIDMHGREKN 491
FD + Y S+ S + +A+ E PN VYN I +
Sbjct: 675 FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGK 734
Query: 492 LRQLEKLWNEM-KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAG 550
L KL++++ + PD+ +YT +I + AG+ L +E + G + +
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYN 794
Query: 551 IMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
++ K+G +D+ +LL + +G + Y + + +++G +A L+E
Sbjct: 795 ALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKE 849
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/487 (19%), Positives = 183/487 (37%), Gaps = 68/487 (13%)
Query: 136 RFKKWDFILSVSEDFKIYHVLPDG----ATCSKLIEFCIRQRKFKIAETLLNAFKSDSEV 191
R W S+ D Y+ L DG + ++ C + + ++ T
Sbjct: 391 RMNDW----SLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT----------- 435
Query: 192 AVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLF 251
V + L+ Y+++ F + +++ + V D S ++EA KL D +KL+
Sbjct: 436 -VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 252 HEFESRNL--------------------RDSKRYLG-----------QIYGVLCESLGKC 280
+R L ++K L Q Y L K
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 281 GRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
G + EA M +KGIF + +Y+TLI + +V +L+ E ++R Y
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 340 LKLVIMYVEEDLLEKT----LEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYE 395
L+ + +++K E++E +V +C + N + A +
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICS----KIANSLFRLDKIDEACLLLQ 670
Query: 396 KLIS-QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV----AYSSMIVM 450
K++ PG + + A + K +K+ E +E K +V Y+ I
Sbjct: 671 KIVDFDLLLPGYQSLKEFLEASA--TTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAG 728
Query: 451 YGRSGRLRNAMKLVAKMKERG-CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
++G+L +A KL + + P+ + Y LI ++ + L +EM + + P
Sbjct: 729 LCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIP 788
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
+ V+Y ++I K G + L ++ G + ++ K G + + ++L
Sbjct: 789 NIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLK 848
Query: 570 QDMKMEG 576
+ M +G
Sbjct: 849 EKMIEKG 855
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 135/309 (43%), Gaps = 37/309 (11%)
Query: 286 ALEYFRVMTKKGIF--ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
AL +F + ++ F + Y+T++ + + G + +LL E + Y +L+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
Y + L + + V M++A G +
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEA-----------------------------------GCK 431
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P +VTY ++I+ + + + A +++ M+ G YS +I G++G L A KL
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+M ++GC PN+ YN ++D+H + +N + KL+ +M+ PDKV+Y+ ++
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 524 AGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRL 583
G E +F E + + D + G++V ++ K G +++ + Q M G R +
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 584 YQSAWNAFI 592
S + F+
Sbjct: 612 CNSLLSTFL 620
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 121/293 (41%), Gaps = 5/293 (1%)
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
D Y+ ++ + ++ KL E +RD + Y L S G+ ++EA
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEM----VRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 287 LEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
+ F M + G V Y TLI A + ++ + ++ D Y ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
+ L ++ M D +++ +K R + A++ Y + + G+EP
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
+VTY+ V+ +AE VF EM+QK + Y ++ ++G++G + A +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
M G +PNV NSL+ R + + +L M + P +YT ++
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
++ G K + Y +++ GR K + KL +EM R P+ V+Y +I +Y +A
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
+FN+ + G DR ++ + +K G +D + + Q M+ G D Y
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 588 WNAFIEAG 595
N +AG
Sbjct: 476 INCLGKAG 483
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 135/309 (43%), Gaps = 37/309 (11%)
Query: 286 ALEYFRVMTKKGIF--ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
AL +F + ++ F + Y+T++ + + G + +LL E + Y +L+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
Y + L + + V M++A G +
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEA-----------------------------------GCK 431
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P +VTY ++I+ + + + A +++ M+ G YS +I G++G L A KL
Sbjct: 432 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKL 491
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+M ++GC PN+ YN ++D+H + +N + KL+ +M+ PDKV+Y+ ++
Sbjct: 492 FCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGH 551
Query: 524 AGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRL 583
G E +F E + + D + G++V ++ K G +++ + Q M G R +
Sbjct: 552 CGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPT 611
Query: 584 YQSAWNAFI 592
S + F+
Sbjct: 612 CNSLLSTFL 620
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 121/293 (41%), Gaps = 5/293 (1%)
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
D Y+ ++ + ++ KL E +RD + Y L S G+ ++EA
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEM----VRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 287 LEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
+ F M + G V Y TLI A + ++ + ++ D Y ++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
+ L ++ M D +++ +K R + A++ Y + + G+EP
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
+VTY+ V+ +AE VF EM+QK + Y ++ ++G++G + A +
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
M G +PNV NSL+ R + + +L M + P +YT ++
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%)
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
++ G K + Y +++ GR K + KL +EM R P+ V+Y +I +Y +A
Sbjct: 356 RQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYL 415
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
+FN+ + G DR ++ + +K G +D + + Q M+ G D Y
Sbjct: 416 NEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 588 WNAFIEAG 595
N +AG
Sbjct: 476 INCLGKAG 483
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+VNG K +A+ K+ +P V Y+++I+ C+ ++ A+ +F EM +K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G V Y+ MI + GR +A +L+ M ER P+V +N+LI +E L +
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
EKL +EM R + PD V+Y SMI + K F+ +F+ D ++ V
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDV 441
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
+ + ++D+ ++LL+++ G + Y + + F E
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 157/385 (40%), Gaps = 21/385 (5%)
Query: 218 KLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESL 277
K+ + +D Y I+ K+ D +S + L + E +++ IY + + L
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV----VIYSAIIDRL 306
Query: 278 GKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
K G S+A F M +KGI + Y+ +I F S + + + LLR+ R D
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVN------GFSKRRGFSAA 390
+ L+ V+E ++ EA K D + C+ V GF K F A
Sbjct: 367 LTFNALISASVKEG------KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
++ + S P VT+ ++I+ YCR + ++ ++ E+ ++G Y+++I
Sbjct: 421 KHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ L A L +M G P+ N L+ + L + +L+ ++ K+ D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
V+Y +I K + + +LF I+G D +M+ F I L
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 571 DMKMEGTRLDQRLYQSAWNAFIEAG 595
MK G D Y + ++AG
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAG 621
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 161/408 (39%), Gaps = 40/408 (9%)
Query: 168 FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLD 227
C+ R + A + + V +G+ + K+ + + + K++ + D
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKC--GRVSE 285
YS I++ K LF E + + + ++ C G C GR S+
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN------VFTYNCMIDGFCSFGRWSD 349
Query: 286 ALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVI 344
A R M ++ I + ++ LI + K+ E E+L E R D Y ++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 345 MYVEEDLLEKTLEVVEAMKDADVKVCDCML---C-------------------------- 375
+ + + + + + M DV + ++ C
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 376 --AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
+++GF + +AA ++++IS G P +T ++ +C + +A ++FE ++
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
D VAY+ +I + ++ A L + G +P+V YN +I + +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
L+++MK PD +Y ++I KAGE + EL +E R NG
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 6/215 (2%)
Query: 380 GFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDK 439
G+ GF AV +++++ G P +T+ ++IN C + +A + +M KG
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 440 CVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW 499
VV Y +++ + G ++A+ L++KM+E KP+V +Y+++ID ++ + + L+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN---EYRINGGVIDRAMAGIMVGVF 556
+EM + +AP+ +Y MI + G + L E IN V+ ++
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL---TFNALISAS 376
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
K G++ + KL +M D Y S F
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 108/248 (43%), Gaps = 16/248 (6%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC---RLSQ------------ 421
++ F S ++ + KL G++P VT+ ++++ C R+S+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
+ +A +F++M + G V+ ++++I GR+ A LV KM +G +V Y +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
+++ + + + L ++M+ + PD V Y+++I K G LF+E G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA- 600
+ M+ F G+ +LL+DM D + + +A ++ G +A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 601 KWLQESFH 608
K E H
Sbjct: 387 KLCDEMLH 394
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 98/205 (47%), Gaps = 1/205 (0%)
Query: 282 RVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
RV E ++ R ++++G+ ++ Y+TLI F + + ++L +E S D
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
L+ + E + LE+ LE+ E ++ + + + +++G K A + L
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G EP TY +I+ +C S + A +F +M+ G + Y+++I ++G + +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDM 485
++L+++M+ G + + + D+
Sbjct: 627 IELISEMRSNGFSGDAFTIKMVADL 651
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/503 (21%), Positives = 213/503 (42%), Gaps = 76/503 (15%)
Query: 156 LPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVL 214
+P T + +I ++Q A L + SD + V A S + + K + ++
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALV 360
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+F+K++ +S +S ++E + K + E ++ + + E L S ++ I
Sbjct: 361 LFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI----I 416
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIK 334
+ K + EAL+ F + G+ V +T++ K E ELL + +SR
Sbjct: 417 QGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 335 DPEVYLKLVIMYVEE-----------DLLEK------------------------TLEVV 359
+ Y +++ + + ++LEK LEVV
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 360 EAMKDADVKV------------CD--------------------CMLC----AVVNGFSK 383
M ++++V C C+ C ++++GF K
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
+AV AYE++ G P +TY S++N C+ ++ ++A ++ +EM+ KG + A
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
Y ++I + + + +A L +++ E G P+ +YNSLI N+ L+ +M
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
+ + D +YT++I K G +EL+ E + G V D + ++V SK GQ
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 564 QLVKLLQDMKMEGTRLDQRLYQS 586
++VK+ ++MK + +Y +
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNA 799
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 189/420 (45%), Gaps = 38/420 (9%)
Query: 162 CSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKL---HMFRRTV----L 214
C+ ++ + +Q K A LL+ +S G + +YN + H ++ + +
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESR------GIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
VF + + ++ YS +++ + D ++ +++ + S N+ + G +Y +
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVN----GVVYQTII 555
Query: 275 ESLGKCGRVSEALEYFRVMT--KKGIFESSVYSTLICSFASLHKVGEV-------EELLR 325
L K G+ S+A E M K+ Y+++I F K GE+ EE+
Sbjct: 556 NGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGF---FKEGEMDSAVAAYEEMCG 612
Query: 326 EAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRR 385
S I Y L+ + + +++ LE+ + MK+ VK+ A+++GF KR
Sbjct: 613 NGISPNVI----TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRS 668
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
+A + +L+ +G P Q Y S+I+ + L A ++++M + G + Y+
Sbjct: 669 NMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
++I + G L A +L +M+ G P+ +Y +++ ++ ++ K++ EMK+
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKN 788
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
V P+ + Y ++I + + G + L +E G + D A I+V GQ+ L
Sbjct: 789 NVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVS-----GQVGNL 843
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 160/368 (43%), Gaps = 6/368 (1%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ K++S + + Y+++M + + + + +F + L+ + Y +L
Sbjct: 465 LLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN----YTYSILI 520
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ + ALE MT I VY T+I + + + ELL ++
Sbjct: 521 DGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRL 580
Query: 334 -KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
Y ++ + +E ++ + E M + +++NG K A+
Sbjct: 581 CVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALE 640
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
+++ ++G + Y ++I+ +C+ S A +F E+ ++G + Y+S+I +
Sbjct: 641 MRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFR 700
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
G + A+ L KM + G + ++ Y +LID ++ NL +L+ EM+ + PD++
Sbjct: 701 NLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEI 760
Query: 513 SYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
YT ++ SK G+F ++F E + N + + ++ + G +D+ +L +M
Sbjct: 761 IYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEM 820
Query: 573 KMEGTRLD 580
+G D
Sbjct: 821 LDKGILPD 828
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/462 (20%), Positives = 195/462 (42%), Gaps = 18/462 (3%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFA---FGSALRNYNKLHMFRRTV 213
PD S ++ C + +A +LL K + ++ V + + S + K +
Sbjct: 266 PDSLLYSLAVQACCKTLDLAMANSLLREMK-EKKLCVPSQETYTSVILASVKQGNMDDAI 324
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVL 273
+ +++ S+ + ++ + ++ + K +D S + LF + E ++ + VL
Sbjct: 325 RLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME----KEGPSPNSVTFSVL 380
Query: 274 CESLGKCGRVSEALEYFRVMTKKGIFESSVY-STLICSFASLHKVGEVEELLREAKSRTK 332
E K G + +ALE+++ M G+ S + T+I + K E +L E+ T
Sbjct: 381 IEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES-FETG 439
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
+ + V ++ ++ ++ E++ M+ + V+ G +++ A
Sbjct: 440 LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARI 499
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
+ ++ +G +P TY+ +I+ R A +V M + V Y ++I
Sbjct: 500 VFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLC 559
Query: 453 RSGRLRNAMKLVAKMKE--RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ G+ A +L+A M E R C + YNS+ID +E + + EM ++P+
Sbjct: 560 KVGQTSKARELLANMIEEKRLCV-SCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPN 618
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
++YTS++ K + E+ +E + G +D G ++ F K ++ L
Sbjct: 619 VITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Query: 571 DMKMEGTRLDQRLYQSAWNAF-----IEAGLQLQAKWLQESF 607
++ EG Q +Y S + F + A L L K L++
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGL 720
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 148/353 (41%), Gaps = 42/353 (11%)
Query: 226 LDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSE 285
++SR +++++ AYSK + V + ++ ++ Y+ + L + ++E
Sbjct: 161 VNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQR----NSLTE 216
Query: 286 ALEYFRVMTKKGIFESSVYSTLICSFASL--HKVGEVEELLREAKSRTKIKDPEVYLKLV 343
A E + M G+ +V + L+ ASL K E E+L A R
Sbjct: 217 AKELYSRMVAIGVDGDNVTTQLLMR-ASLREEKPAEALEVLSRAIERG------------ 263
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
E D L +L V K D+ + + +L + K +
Sbjct: 264 ---AEPDSLLYSLAVQACCKTLDLAMANSLLREM-----KEKKLCV-------------- 301
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P Q TY SVI A + + A ++ +EM G VVA +S+I + ++ L +A+ L
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
KM++ G PN ++ LI+ + + + + + +M+ + P ++I + K
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 524 AGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
+ E +LF+E G+ + + ++ K G+ D+ +LL M+ G
Sbjct: 422 GQKHEEALKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRG 473
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 178/421 (42%), Gaps = 14/421 (3%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVLV 215
PD T + LI + KF+ AE L ++ E + + + + Y K M + +
Sbjct: 284 PDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI 343
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
N V D Y +++ + + LF+E + ++ + +Y L +
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV----ILYNTLIK 399
Query: 276 SLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIK 334
L G + EA + M++KG+ E ++ L+ + V + + L++ S+
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
D + L+ Y + +E LE+++ M D V +++NG K F + Y
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+ ++ +G P T+ ++ + CR + ++A + EEM+ K + V + ++I + ++
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 455 GRLRNAMKLVAKMKER-GCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
G L A L KM+E + YN +I + N+ EKL+ EM R + PD +
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG-------VFSKVGQIDQLV 566
Y M+ + K G + E NG + G ++ V+ G I ++V
Sbjct: 640 YRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Query: 567 K 567
+
Sbjct: 700 Q 700
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 144/342 (42%), Gaps = 44/342 (12%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
Y L + L G + AL F KGI + + Y+TLI ++ + E +L E
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMS 418
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
+ I PEV +T ++ VNG K S
Sbjct: 419 EKGLI--PEV---------------QTFNIL------------------VNGLCKMGCVS 443
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A + +IS+GY P T+ +I+ Y + A ++ + M G D V Y+S++
Sbjct: 444 DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLL 503
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
++ + + M+ M E+GC PN++ +N L++ R + L + L EMK + V
Sbjct: 504 NGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN 563
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNE----YRINGGVIDRAMAGIMVGVFSKVGQIDQ 564
PD V++ ++I + K G+ + LF + Y+++ I++ F++ +
Sbjct: 564 PDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST---PTYNIIIHAFTEKLNVTM 620
Query: 565 LVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG-LQLQAKWLQE 605
KL Q+M D Y+ + F + G + L K+L E
Sbjct: 621 AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLE 662
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 102/473 (21%), Positives = 192/473 (40%), Gaps = 53/473 (11%)
Query: 107 AFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFK--IYHVLPDGATCSK 164
A + + ++ F+ ST + VI L + K++ + V D + + + + +G
Sbjct: 23 ALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 165 LIEFCIRQRKFKIAETLLNAFKS----DSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLK 220
+ + RK K+ E + N F+ D E VF++ + + F + V+ +++
Sbjct: 83 MKNY---GRKGKVQEAV-NVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 221 SNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKC 280
+ D ++ M+++ K + ++L + S+ + + G E K
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK- 197
Query: 281 GRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
+E E F M G+ S + +F +LLR + +K+ E L
Sbjct: 198 ---AEGYELFGKMLASGV------SLCLSTF---------NKLLRVLCKKGDVKECEKLL 239
Query: 341 KLVIMY-VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
VI V +L L + G +R AVR LI
Sbjct: 240 DKVIKRGVLPNLFTYNL--------------------FIQGLCQRGELDGAVRMVGCLIE 279
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
QG +P +TY ++I C+ S++ +AE +M +G + Y+++I Y + G ++
Sbjct: 280 QGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQL 339
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
A ++V G P+ + Y SLID E + L+NE + + P+ + Y ++I
Sbjct: 340 AERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI---DQLVKLL 569
S G +L NE G + + I+V K+G + D LVK++
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVM 452
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/414 (21%), Positives = 173/414 (41%), Gaps = 32/414 (7%)
Query: 199 ALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRN 258
AL +N + R+ V L + V++ GY Y K + E V+ E +
Sbjct: 23 ALEMFNSM---RKEVGFKHTLSTYRSVIEKLGY------YGKFEAMEEVLVDMRENVGNH 73
Query: 259 LRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVM----TKKGIFE-SSVYSTLICS--F 311
+ + Y+G + ++ G+ G+V EA+ F M + +F +++ S L+ S F
Sbjct: 74 MLEG-VYVGAM-----KNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYF 127
Query: 312 ASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM--YVEEDLLEKTLEVVEAMKDADVKV 369
HKV + R + P+VY + M + + L ++ M ++
Sbjct: 128 DQAHKV--------YMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 370 CDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
C VV GF + + + K+++ G T+ ++ C+ + EK+
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLL 239
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
+++ ++G + Y+ I + G L A+++V + E+G KP+V YN+LI +
Sbjct: 240 DKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 490 KNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA 549
++ E +M + PD +Y ++I Y K G + + + NG V D+
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 550 GIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
++ G+ ++ + L + +G + + LY + G+ L+A L
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQL 413
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 149/375 (39%), Gaps = 7/375 (1%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y M+ Y + + V +F + + + I VL +S G +A + +
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDS----GYFDQAHKVY 134
Query: 291 RVMTKKGIFESSVYSTLI--CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
M +GI VYS I SF + LL S+ + Y +V + E
Sbjct: 135 MRMRDRGI-TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYE 193
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
E+ + E+ M + V +C ++ K+ + +K+I +G P T
Sbjct: 194 ENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y I C+ + + A ++ + ++G V+ Y+++I ++ + + A + KM
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
G +P+ + YN+LI + + ++ E++ + PD+ +Y S+I GE
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 529 TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAW 588
LFNE G + + ++ S G I + +L +M +G + + +
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 589 NAFIEAGLQLQAKWL 603
N + G A L
Sbjct: 434 NGLCKMGCVSDADGL 448
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 97/222 (43%), Gaps = 4/222 (1%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAK 328
Y L L K + + +E ++ M +KG + ++ L+ S K+ E LL E K
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA-DVKVCDCMLCAVVNGFSKRRGF 387
+++ D + L+ + + L+ + M++A V +++ F+++
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
+ A + +++++ + P TY +++ +C+ N K EM + GF + +
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRV 678
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
I R+ A ++ +M ++G P N++ D+ +E
Sbjct: 679 INCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTICDVDKKE 718
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 129/260 (49%), Gaps = 3/260 (1%)
Query: 339 YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVC-DCMLC-AVVNGFSKRRGFSAAVRAYEK 396
+ L+ +VE+ ++ +EV+E M + +V D +C AV++GF K A+ +E
Sbjct: 137 FCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFES 196
Query: 397 LISQG-YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
+ G P VTY ++++A C+L + ++ + +E +GF+ V YS+ I Y + G
Sbjct: 197 AVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGG 256
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
L +A+ +M E+G +V Y+ LID +E N+ + L +M + V P+ ++YT
Sbjct: 257 ALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYT 316
Query: 516 SMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
++I K G+ E LFN G +D + ++ + G +++ +L DM+
Sbjct: 317 AIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR 376
Query: 576 GTRLDQRLYQSAWNAFIEAG 595
G + Y + N AG
Sbjct: 377 GIQPSILTYNTVINGLCMAG 396
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/518 (20%), Positives = 219/518 (42%), Gaps = 49/518 (9%)
Query: 101 PKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGA 160
P+T F LK F P +++ +RYL R +K++ IL + +
Sbjct: 5 PRTSSGLFSLQSLLKSG--FSPTLNSIDRFLRYLYRLQKFNCILQFYSQLDSKQININHR 62
Query: 161 TCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRT-------- 212
S + + +++ AE +N S+ ++F L + +H F T
Sbjct: 63 IYSIVSWAFLNLNRYEDAEKFINIHI--SKASIFPRTHMLDSL--IHGFSITRDDPSKGL 118
Query: 213 VLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGV 272
+++ + L+++ S + ++ + + + ++ +++ ++N+ + + +
Sbjct: 119 LILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNV--NYPFDNFVCSA 176
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSR 330
+ K G+ AL +F G+ ++ Y+TL+ + L KV EV +L+R +
Sbjct: 177 VISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE 236
Query: 331 TKIKDPEVYLKLVIMYVEE----DLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
D Y + Y + D L + E+VE + DV +++G SK
Sbjct: 237 GFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDV----VSYSILIDGLSKEGN 292
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
A+ K+I +G EP +TY ++I C++ + +A +F + G + Y +
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID---MHGREKNLRQLEKLWNEMK 503
+I R G L A ++ M++RG +P++ YN++I+ M GR ++ K
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK------ 406
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTEL---FNEYRINGGVIDRAMAGIMVGVF---S 557
V D ++Y++++ +Y K + E+ F E +I +D M I++ F
Sbjct: 407 --GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIP---MDLVMCNILLKAFLLMG 461
Query: 558 KVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
G+ D L + + +M + D Y + + + G
Sbjct: 462 AYGEADALYRAMPEMDLTP---DTATYATMIKGYCKTG 496
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 184/433 (42%), Gaps = 27/433 (6%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVF 216
PD AT + +I+ + + + A + N + S A + + K M V
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKKGMLDTATEVL 539
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCES 276
+L + LD ++ + + ++ L + E N L +LC
Sbjct: 540 IELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLC-- 597
Query: 277 LGKCGRVSEALEYFRVMTKKGI---FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
K G A+E + +M +KG+ F S++ TL+ + SL LL T +
Sbjct: 598 --KRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAY-----LLVVNAGETTL 650
Query: 334 KDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAV 391
+V Y ++ +E L K L + K V + +++NG ++ A+
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
R ++ L + G P +VTY +I+ C+ + AEK+ + M KG ++ Y+S++ Y
Sbjct: 711 RLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGY 770
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
+ G+ +AM++V++ P+ + +S+I + ++ ++ + ++ E K + ++ D
Sbjct: 771 CKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADF 830
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRINGGVI------------DRAMAGIMVGVFSKV 559
+ +I + G E L E ++ V+ ++ G +V + +
Sbjct: 831 FGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQ- 889
Query: 560 GQIDQLVKLLQDM 572
G++ Q +K+L ++
Sbjct: 890 GRVPQAIKILDEI 902
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 159/391 (40%), Gaps = 19/391 (4%)
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
D+ Y+ +++ Y K E +++F+E LR S Y + ++L K G + A
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFNE-----LRKSSVSAAVCYNRIIDALCKKGMLDTA 535
Query: 287 LEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKL--- 342
E + +KG++ + TL+ S+H G + +L ++ + +V L +
Sbjct: 536 TEVLIELWEKGLYLDIHTSRTLL---HSIHANGGDKGILGLVYGLEQL-NSDVCLGMLND 591
Query: 343 -VIMYVEEDLLEKTLEVVEAMKDADVKVC--DCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
+++ + E +EV M+ + V +L +V+ + V A E +S
Sbjct: 592 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLS 651
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+ Y +IN C+ KA + + +G + Y+S+I + G L
Sbjct: 652 S---MDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVE 708
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
A++L ++ G P+ Y LID +E EKL + M + + P+ + Y S++
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
Y K G+ E + + + D M+ + K G +++ + + + K +
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISA 828
Query: 580 DQRLYQSAWNAFIEAGLQLQAKWLQESFHVS 610
D + F G +A+ L VS
Sbjct: 829 DFFGFLFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 22/273 (8%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y+ I+ K+ E LF+ S + + +Y L + + + G ++ A
Sbjct: 315 YTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEF----LYVTLIDGICRKGNLNRAFSML 370
Query: 291 RVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE 349
M ++GI S + Y+T+I +V E +E+ S+ + D Y L+ Y++
Sbjct: 371 GDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKV 425
Query: 350 DLLEKTLEV----VEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
++ LE+ +EA D+ +C+ +L A F + A Y + P
Sbjct: 426 QNIDAVLEIRRRFLEAKIPMDLVMCNILLKA----FLLMGAYGEADALYRAMPEMDLTPD 481
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
TYA++I YC+ Q +A ++F E+ + V Y+ +I + G L A +++
Sbjct: 482 TATYATMIKGYCKTGQIEEALEMFNELRKSSV-SAAVCYNRIIDALCKKGMLDTATEVLI 540
Query: 466 KMKERGCKPNVWVYNSL---IDMHGREKNLRQL 495
++ E+G ++ +L I +G +K + L
Sbjct: 541 ELWEKGLYLDIHTSRTLLHSIHANGGDKGILGL 573
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+VNG K +A+ K+ +P V Y+++I+ C+ ++ A+ +F EM +K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G V Y+ MI + GR +A +L+ M ER P+V +N+LI +E L +
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
EKL +EM R + PD V+Y SMI + K F+ +F+ D ++ V
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDV 441
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
+ + ++D+ ++LL+++ G + Y + + F E
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 157/385 (40%), Gaps = 21/385 (5%)
Query: 218 KLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESL 277
K+ + +D Y I+ K+ D +S + L + E +++ IY + + L
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDV----VIYSAIIDRL 306
Query: 278 GKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
K G S+A F M +KGI + Y+ +I F S + + + LLR+ R D
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVN------GFSKRRGFSAA 390
+ L+ V+E ++ EA K D + C+ V GF K F A
Sbjct: 367 LTFNALISASVKEG------KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
++ + S P VT+ ++I+ YCR + ++ ++ E+ ++G Y+++I
Sbjct: 421 KHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHG 476
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ L A L +M G P+ N L+ + L + +L+ ++ K+ D
Sbjct: 477 FCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
V+Y +I K + + +LF I+G D +M+ F I L
Sbjct: 537 TVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFH 596
Query: 571 DMKMEGTRLDQRLYQSAWNAFIEAG 595
MK G D Y + ++AG
Sbjct: 597 KMKDNGHEPDNSTYNTLIRGCLKAG 621
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 161/408 (39%), Gaps = 40/408 (9%)
Query: 168 FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLD 227
C+ R + A + + V +G+ + K+ + + + K++ + D
Sbjct: 236 LCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPD 295
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKC--GRVSE 285
YS I++ K LF E + + + ++ C G C GR S+
Sbjct: 296 VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPN------VFTYNCMIDGFCSFGRWSD 349
Query: 286 ALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVI 344
A R M ++ I + ++ LI + K+ E E+L E R D Y ++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 345 MYVEEDLLEKTLEVVEAMKDADVKVCDCML---C-------------------------- 375
+ + + + + + M DV + ++ C
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 376 --AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
+++GF + +AA ++++IS G P +T ++ +C + +A ++FE ++
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
D VAY+ +I + ++ A L + G +P+V YN +I + +
Sbjct: 530 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 589
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
L+++MK PD +Y ++I KAGE + EL +E R NG
Sbjct: 590 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 6/215 (2%)
Query: 380 GFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDK 439
G+ GF AV +++++ G P +T+ ++IN C + +A + +M KG
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 440 CVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW 499
VV Y +++ + G ++A+ L++KM+E KP+V +Y+++ID ++ + + L+
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN---EYRINGGVIDRAMAGIMVGVF 556
+EM + +AP+ +Y MI + G + L E IN V+ ++
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL---TFNALISAS 376
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
K G++ + KL +M D Y S F
Sbjct: 377 VKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 108/248 (43%), Gaps = 16/248 (6%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC---RLSQ------------ 421
++ F S ++ + KL G++P VT+ ++++ C R+S+
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
+ +A +F++M + G V+ ++++I GR+ A LV KM +G +V Y +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
+++ + + + L ++M+ + PD V Y+++I K G LF+E G
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA- 600
+ M+ F G+ +LL+DM D + + +A ++ G +A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 601 KWLQESFH 608
K E H
Sbjct: 387 KLCDEMLH 394
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 114/285 (40%), Gaps = 45/285 (15%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVL 214
+ PD T + +I + +F A+ + + S V F + + Y + +
Sbjct: 397 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPD---VVTFNTIIDVYCRAKRVDEGMQ 453
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNL-RDSKRYLGQIYGVL 273
+ ++ +V ++ Y+ ++ + ++D+ + LF E S + D+ +YG
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYG-F 512
Query: 274 CESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTK 332
CE+ ++ EALE F V+ I ++ Y+ +I KV E +L
Sbjct: 513 CEN----EKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL--------- 559
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
+ L I VE D+ +T V+ ++GF + S A
Sbjct: 560 ------FCSLPIHGVEPDV--QTYNVM------------------ISGFCGKSAISDANV 593
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+ K+ G+EP TY ++I + + +K+ ++ EM GF
Sbjct: 594 LFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 171/385 (44%), Gaps = 36/385 (9%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
VFE +K D Y+ ++ ++ C+ V LF+E + L + +G Y L
Sbjct: 257 VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGL--TLNVVG--YNTLM 312
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI----FESSVYSTLICSFASLHKVGEVEELLREAKSR 330
+ L K V +A++ F M + G + S+ L+ + L ++ V E+ + ++
Sbjct: 313 QVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ 372
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNG-----FSKRR 385
+Y LV +TL + + +A CD M V G S
Sbjct: 373 G------IYSYLV----------RTLSKLGHVSEAHRLFCD-MWSFPVKGERDSYMSMLE 415
Query: 386 GFSAAVRAYE--KLISQGYEPGQVT----YASVINAYCRLSQYNKAEKVFEEMEQKGFDK 439
A + E +++S+ +E G VT Y +V +A +L Q + +FE+M++ G
Sbjct: 416 SLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSP 475
Query: 440 CVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW 499
+ Y+ +I +GR G + A+ + +++ CKP++ YNSLI+ G+ ++ + +
Sbjct: 476 DIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRF 535
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKV 559
EM+ + + PD V+Y++++ + K E LF E + G + I++ K
Sbjct: 536 KEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKN 595
Query: 560 GQIDQLVKLLQDMKMEGTRLDQRLY 584
G+ + V L MK +G D Y
Sbjct: 596 GRTAEAVDLYSKMKQQGLTPDSITY 620
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 173/382 (45%), Gaps = 25/382 (6%)
Query: 146 VSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYN 204
V ED K H D T + +I R K A L N ++ + V + + ++
Sbjct: 257 VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLA 316
Query: 205 KLHMFRRTVLVFEKLKSNSVVLDSRGYS---HIMEAYSKLDDCESVVKLFHEFESRNLRD 261
K M + + VF ++ + YS +++ A +L + VV++
Sbjct: 317 KGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEI----------- 365
Query: 262 SKRYLGQ-IYGVLCESLGKCGRVSEALEYFRVM---TKKGIFESSVYSTLICSFASLHKV 317
SKRY+ Q IY L +L K G VSEA F M KG E Y +++ S K
Sbjct: 366 SKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG--ERDSYMSMLESLCGAGKT 423
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
E E+L + + + D +Y + + + ++ E MK +
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNIL 483
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+ F + A+ +E+L +P ++Y S+IN + ++A F+EM++KG
Sbjct: 484 IASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGL 543
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE- 496
+ VV YS+++ +G++ R+ A L +M +GC+PN+ YN L+D EKN R E
Sbjct: 544 NPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDC--LEKNGRTAEA 601
Query: 497 -KLWNEMKRRKVAPDKVSYTSM 517
L+++MK++ + PD ++YT +
Sbjct: 602 VDLYSKMKQQGLTPDSITYTVL 623
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 127/272 (46%), Gaps = 15/272 (5%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHE---FESRNLRDSKRYLGQIYGVLCESLGKCGRVSEAL 287
YS+++ SKL +LF + F + RDS Y + ESL G+ EA+
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDS-------YMSMLESLCGAGKTIEAI 427
Query: 288 EYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMY 346
E + +KG+ ++ +Y+T+ + L ++ + +L + K D Y L+ +
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 347 VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQ 406
+++ + + E ++ +D K +++N K A ++++ +G P
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV 547
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
VTY++++ + + + A +FEEM KG +V Y+ ++ ++GR A+ L +K
Sbjct: 548 VTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSK 607
Query: 467 MKERGCKPNVWVYNSLIDM----HGREKNLRQ 494
MK++G P+ Y L + HG+ + R+
Sbjct: 608 MKQQGLTPDSITYTVLERLQSVSHGKSRIRRK 639
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/454 (18%), Positives = 189/454 (41%), Gaps = 48/454 (10%)
Query: 139 KWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGS 198
++D + S+ + +V + +T + LI F ++ L+ K D ++ F +
Sbjct: 151 RFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVK--KWDLKMNSFTYKC 208
Query: 199 ALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRN 258
L+ Y + + + V+ +++ LD Y+ +++A +K E ++F + + R+
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK---DEKACQVFEDMKKRH 265
Query: 259 LRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKV 317
R + Y ++ ++G+ G+ EA+ F M +G+ + V Y+TL+ A V
Sbjct: 266 CRRDE----YTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
+ ++ + Y L+ + V E L + VVE K
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISK-------------- 367
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+ ++QG Y+ ++ +L ++A ++F +M
Sbjct: 368 ------------------RYMTQG------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPV 403
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
+Y SM+ +G+ A+++++K+ E+G + +YN++ G+ K + +
Sbjct: 404 KGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHD 463
Query: 498 LWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFS 557
L+ +MK+ +PD +Y +I ++ + GE + +F E + D ++
Sbjct: 464 LFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG 523
Query: 558 KVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
K G +D+ ++M+ +G D Y + F
Sbjct: 524 KNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 112/250 (44%), Gaps = 12/250 (4%)
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
+K D+K+ ++ + + R +S A Y ++ G++ Y +++A L++
Sbjct: 194 VKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDA---LAK 250
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
KA +VFE+M+++ + Y+ MI GR G+ A+ L +M G NV YN+
Sbjct: 251 DEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF---ETCTELFNEYR 538
L+ + + K + + ++++ M P++ +Y+ ++ G+ + E+ Y
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM 370
Query: 539 INGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQL 598
G + +V SK+G + + +L DM + ++ Y S + AG +
Sbjct: 371 TQG------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTI 424
Query: 599 QAKWLQESFH 608
+A + H
Sbjct: 425 EAIEMLSKIH 434
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 98/216 (45%), Gaps = 5/216 (2%)
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+K + A++ + +++ G P + TY+ ++N Q + + V E + ++ +
Sbjct: 315 LAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVE-ISKRYMTQG 373
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID-MHGREKNLRQLEKLW 499
+ YS ++ + G + A +L M K Y S+++ + G K + +E L
Sbjct: 374 I--YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEML- 430
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKV 559
+++ + V D + Y ++ A K + +LF + + +G D I++ F +V
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 560 GQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
G++D+ + + ++++ + D Y S N + G
Sbjct: 491 GEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 140/318 (44%)
Query: 283 VSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKL 342
+ +A+ ++ K G + Y+ LI F ++++ + +L +S+ D Y +
Sbjct: 140 IPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 343 VIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGY 402
+ L+ L+V+ + + + ++ G A++ ++++S+G
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 403 EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMK 462
+P TY ++I C+ ++A ++ +E KG + V++Y+ ++ G+ K
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 463 LVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYS 522
L+ KM C PNV Y+ LI R+ + + L MK + + PD SY +I A+
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 523 KAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQR 582
+ G + E +G + D ++ K G+ DQ +++ + G +
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 583 LYQSAWNAFIEAGLQLQA 600
Y + ++A +G +++A
Sbjct: 440 SYNTMFSALWSSGDKIRA 457
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 175/421 (41%), Gaps = 46/421 (10%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVF 216
PD C+KLI+ R A ++ + + VFA+ + + + K++ V
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVL 181
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCES 276
++++S D+ Y+ ++ + + +K+ ++ S N + + Y +L E+
Sbjct: 182 DRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTV----ITYTILIEA 237
Query: 277 LGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
G V EAL +L+ E SR D
Sbjct: 238 TMLEGGVDEAL----------------------------------KLMDEMLSRGLKPDM 263
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMK----DADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
Y ++ +E ++++ E+V ++ + DV + +L A++N + + +
Sbjct: 264 FTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN----QGKWEEGEK 319
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
K+ S+ +P VTY+ +I CR + +A + + M++KG +Y +I +
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
R GRL A++ + M GC P++ YN+++ + Q +++ ++ +P+
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 513 SYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
SY +M A +G+ + E NG D M+ + G +D+ +LL DM
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 573 K 573
+
Sbjct: 500 R 500
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 148/368 (40%), Gaps = 13/368 (3%)
Query: 244 CESVVKLFHEFESRNLRDSKRYL------GQ----IYGVLCESLGKCGRVSEALEYFRVM 293
C ++K F F RN+ + R + GQ Y L K R+ +A M
Sbjct: 127 CTKLIKGF--FTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRM 184
Query: 294 TKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLL 352
K +V Y+ +I S S K+ ++L + S Y L+ + E +
Sbjct: 185 RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGV 244
Query: 353 EKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASV 412
++ L++++ M +K ++ G K A L +G EP ++Y +
Sbjct: 245 DEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
+ A ++ + EK+ +M + D VV YS +I R G++ AM L+ MKE+G
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
P+ + Y+ LI RE L + M PD V+Y +++ K G+ + E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
+F + G + + M G + + ++ +M G D+ Y S +
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484
Query: 593 EAGLQLQA 600
G+ +A
Sbjct: 485 REGMVDEA 492
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 169/395 (42%), Gaps = 22/395 (5%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
F P+ T +I L K D L V + P T + LIE + + A
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 180 TLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAY 238
L++ S + +F + + +R K M R + L+ D Y+ ++ A
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 239 ---SKLDDCESVV-KLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMT 294
K ++ E ++ K+F E N+ Y +L +L + G++ EA+ ++M
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNV--------VTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 295 KKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLE 353
+KG+ + Y LI +F ++ E L S + D Y ++ + +
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 354 KTLEVVEAMKDA----DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
+ LE+ + + + + M A+ + K R A+ +++S G +P ++TY
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR----ALHMILEMMSNGIDPDEITY 476
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE 469
S+I+ CR ++A ++ +M F VV Y+ +++ + ++ R+ +A+ ++ M
Sbjct: 477 NSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVG 536
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
GC+PN Y LI+ G + +L N++ R
Sbjct: 537 NGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 86/182 (47%), Gaps = 5/182 (2%)
Query: 417 CRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK--ERGCKP 474
CR Y ++ + E M +KG++ V+ + +I + LRN K V M+ E+ +P
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGF---FTLRNIPKAVRVMEILEKFGQP 156
Query: 475 NVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
+V+ YN+LI+ + + ++ + M+ + +PD V+Y MIG+ G+ + ++
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 535 NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
N+ + I++ G +D+ +KL+ +M G + D Y + +
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 595 GL 596
G+
Sbjct: 277 GM 278
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 157/352 (44%), Gaps = 7/352 (1%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ K++ + D Y+ I++ K + LF++ E++ ++ + LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSVY-STLICSFASLHKVGEVEELLRE-AKSRTK 332
GR S+A M +K I V+ + LI +F K+ E E+L E KS+
Sbjct: 297 NY----GRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
D Y L+ + + +E+ +EV M + +++GF + R A
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
+++++S G P +TY +++ C A VFE M+++ +V Y++MI
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
++G++ + L + +G KPNV Y +++ R+ + + L+ EMK P+
Sbjct: 473 KAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSG 532
Query: 513 SYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQ 564
+Y ++I A + G+ EL E R G D + G++ + G++D+
Sbjct: 533 TYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD-GRLDK 583
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 108/256 (42%), Gaps = 36/256 (14%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCR-------LSQYNKAEK- 427
+V+G + S AV E+++ +G +P VTY +VIN C+ L+ NK EK
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 428 ---------------------------VFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
+F +ME KG V Y+ +I GR +A
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM-KRRKVAPDKVSYTSMIG 519
+L++ M E+ P++ +N+LID +E L + EKL++EM K + PD V+Y ++I
Sbjct: 305 SRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIK 364
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
+ K E E+F E G V + ++ F + D + + M +G
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 580 DQRLYQSAWNAFIEAG 595
D Y + G
Sbjct: 425 DIMTYNILLDGLCNNG 440
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 109/228 (47%)
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+N F +R S A+ K++ GY P VT S++N +C ++ ++A + ++M + G+
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
V +++++ + + A+ LV +M +GC+P++ Y ++I+ +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 498 LWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFS 557
L N+M++ K+ D V Y ++I K + +LFN+ G D ++
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 558 KVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
G+ +LL DM + D + + +AF++ G ++A+ L +
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYD 344
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 133/292 (45%), Gaps = 1/292 (0%)
Query: 282 RVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
++ +A+ F M K F S V +S L+ + A ++K V L + ++ + Y
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
+ + L L ++ M L +++NGF S AV ++++
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
GY+P VT+ ++++ + ++ ++A + E M KG +V Y ++I + G A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+ L+ KM++ + +V +YN++ID + K++ L+N+M+ + + PD +Y +I
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
G + + L ++ D ++ F K G++ + KL +M
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 93/511 (18%), Positives = 200/511 (39%), Gaps = 46/511 (9%)
Query: 97 LFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVL 156
+ QD K ++ + +K RP P ++ + + K+D ++S+ E + +
Sbjct: 50 VLQDLKLDDAIGLFGDMVKSRPF--PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLV 215
+ T S I + R+ + +A +L K ++ S L + + V +
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
+++ D+ ++ ++ + + V L + + G + LC
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC- 226
Query: 276 SLGKCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKI 333
K G AL M +KG E+ V Y+T+I + + +L + +++
Sbjct: 227 ---KRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D Y L+ C C + + +S A R
Sbjct: 283 PDVFTYNPLI-------------------------SCLC-------NYGR---WSDASRL 307
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM-EQKGFDKCVVAYSSMIVMYG 452
++ + P V + ++I+A+ + + +AEK+++EM + K VVAY+++I +
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
+ R+ M++ +M +RG N Y +LI + ++ + ++ +M V PD +
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIM 427
Query: 513 SYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
+Y ++ G ET +F + +D M+ K G+++ L +
Sbjct: 428 TYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Query: 573 KMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
++G + + Y + + F GL+ +A L
Sbjct: 488 SLKGVKPNVVTYTTMMSGFCRKGLKEEADAL 518
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/386 (21%), Positives = 176/386 (45%), Gaps = 13/386 (3%)
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVL 273
L+ E K+N +++ + +M ++ + + V++ E L + ++G L
Sbjct: 153 LIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDE----YVFGCL 208
Query: 274 CESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
++L K G V EA + F M +K +++L+ + K+ E +E+L + K
Sbjct: 209 LDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLE 268
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKV---CDCMLCAVVNGFSKRRGFSAA 390
D V+ L+ Y + +++ M+ + C +L + KR A
Sbjct: 269 PDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKR--MDEA 326
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
+R + ++ G E VTY ++I+ +C+ +K V ++M +KG V Y ++V
Sbjct: 327 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVA 386
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ + + ++L+ KMK RGC P++ +YN +I + + +++ +LWNEM+ ++P
Sbjct: 387 HEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
++ MI ++ G F E ++ G+ G + + + + + D+L ++ +
Sbjct: 447 VDTFVIMINGFTSQGFLIEACNHFKEM-VSRGIFSAPQYGTLKSLLNNLVRDDKL-EMAK 504
Query: 571 DMK--MEGTRLDQRLYQSAWNAFIEA 594
D+ + L SAW +I A
Sbjct: 505 DVWSCISNKTSSCELNVSAWTIWIHA 530
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 165/376 (43%), Gaps = 32/376 (8%)
Query: 196 FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFE 255
+ + + Y KL LVF++LK + + ++ + K D + +L E +
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 256 SRNLRDSKRYLGQI-------------------------------YGVLCESLGKCGRVS 284
R LR S +L I Y +L L K G+
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
Query: 285 EALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
A+ + +KKG+ +++ Y+ LI ++ + +LL + R D Y L+
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
V ++ + + + D V + +++G K F A + +++ +
Sbjct: 423 HGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNIL 482
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P YA++I+ + R +++A KVF +KG VV +++MI + RSG L A+
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+ +M E P+ + Y+++ID + +++++ K++ M++ K P+ V+YTS+I +
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602
Query: 524 AGEFETCTELFNEYRI 539
G+F+ E F E ++
Sbjct: 603 QGDFKMAEETFKEMQL 618
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/455 (19%), Positives = 181/455 (39%), Gaps = 61/455 (13%)
Query: 151 KIYHVLPDGATCSKLIEFCIRQRKF----KIAETLLNAFKSDSEVAVFAFGSALRNYNKL 206
++Y +PD C+ L+ ++ R+ K+ + + + S + + N K+
Sbjct: 162 ELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKV 221
Query: 207 HMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYL 266
+ R+ + E + + Y+ I+ Y KL D E+ +F E + + +
Sbjct: 222 EVGRKLI---EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 267 GQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLRE 326
G + C K+G F +S + LL E
Sbjct: 279 GTMINGFC--------------------KEGDFVAS------------------DRLLSE 300
Query: 327 AKSRTKIKDPEVYLKLVIMYVEEDLLEK--------TLEVVEAMKDADVKVCDCMLCAVV 378
K R L++ + ++ + K E + + D K ++
Sbjct: 301 VKERG--------LRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352
Query: 379 NGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFD 438
N K AV ++ +G P ++YA +I AYC+ +Y+ A K+ +M ++G
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412
Query: 439 KCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKL 498
+V Y +I SG + +A+ + K+ +RG P+ +YN L+ + + L
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Query: 499 WNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSK 558
++EM R + PD Y ++I + ++G+F+ ++F+ G +D M+ F +
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532
Query: 559 VGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIE 593
G +D+ + + M E D+ Y + + +++
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 118/297 (39%), Gaps = 35/297 (11%)
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
L+ + V+ L +V + M D V + C +V G + E +G
Sbjct: 176 LLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKG 235
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
P V Y ++I YC+L A VF+E++ KGF + + +MI + + G +
Sbjct: 236 CIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASD 295
Query: 462 KLVAKMKERG-----------------------------------CKPNVWVYNSLIDMH 486
+L++++KERG CKP+V YN LI+
Sbjct: 296 RLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRL 355
Query: 487 GREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDR 546
+E +E ++ + P+ +SY +I AY K+ E++ ++L + G D
Sbjct: 356 CKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI 415
Query: 547 AMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
GI++ G +D V + + G D +Y + + G L AK L
Sbjct: 416 VTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 132/303 (43%), Gaps = 6/303 (1%)
Query: 223 SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGR 282
++ ++ Y+ +++AY K + + KL + R + YG+L L G
Sbjct: 375 GLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDI----VTYGILIHGLVVSGH 430
Query: 283 VSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
+ +A+ + +G+ ++++Y+ L+ + + L E R + D VY
Sbjct: 431 MDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYAT 490
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
L+ ++ ++ +V + VKV A++ GF + A+ ++ +
Sbjct: 491 LIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEH 550
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
P + TY+++I+ Y + A K+F ME+ VV Y+S+I + G + A
Sbjct: 551 LVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAE 610
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKN-LRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+ +M+ R PNV Y +LI +E + L + W M K P++V++ ++
Sbjct: 611 ETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQG 670
Query: 521 YSK 523
+ K
Sbjct: 671 FVK 673
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 128/263 (48%), Gaps = 7/263 (2%)
Query: 335 DP--EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG-FSAAV 391
DP + Y+ ++ + VEE+ L + + M++ + L ++ + G A +
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
+ + ++ +G +P TY ++I+ CR + ++A+K+F EM +K VV Y+S+I
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
S + AM+ + +MK +G +PNV+ Y+SL+D ++ Q +L+ M R P+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQD 571
V+YT++I K + + EL + + G D + G ++ F + + + L +
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDE 357
Query: 572 MKMEGTRLDQRLYQSAWNAFIEA 594
M + G RL WN ++
Sbjct: 358 MILGGIT-PNRL---TWNIHVKT 376
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+++G + A + + +++ + P VTY S+IN C ++A + EEM+ K
Sbjct: 197 TLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSK 256
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G + V YSS++ + GR AM+L M RGC+PN+ Y +LI +E+ +++
Sbjct: 257 GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEA 316
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
+L + M + + PD Y +I + +F +E + G +R I V
Sbjct: 317 VELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKT 376
Query: 556 FSKV 559
++V
Sbjct: 377 SNEV 380
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 160/397 (40%), Gaps = 19/397 (4%)
Query: 170 IRQRKFKIAETLLNAFK-SDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDS 228
+ KFK AE L+ K + V+ S R Y ++H ++ VF K+K
Sbjct: 62 VSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQ 121
Query: 229 RGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALE 288
+ Y ++ + + K + L + L + LC + G V L+
Sbjct: 122 KAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGT---VDAGLK 178
Query: 289 YFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV 347
F M K+G +S Y TLI ++ E ++L E + Y L+
Sbjct: 179 IFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLC 238
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
+++ + +E MK ++ ++++G K A+ +E ++++G P V
Sbjct: 239 GSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMV 298
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
TY ++I C+ + +A ++ + M +G Y +I + + R A + +M
Sbjct: 299 TYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Query: 468 KERGCKPNVWVYNSLIDMHGREKN--LRQL--------EKLWNEMKRRKVAPDKVSYTSM 517
G PN +N +H + N +R L L+ M+ R ++ + + S+
Sbjct: 359 ILGGITPNRLTWN----IHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESL 414
Query: 518 IGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
+ K GEF+ +L +E +G + + +++G
Sbjct: 415 VKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 115/274 (41%), Gaps = 36/274 (13%)
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
+ D + +V+ V + + +++ MK + V + +L ++ G+ + ++R
Sbjct: 48 VHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLR 107
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
+ K+ +P Q Y +V+ +Q N A K ++ M + G V + + +I
Sbjct: 108 VFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALC 167
Query: 453 RS-GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
R+ G + +K+ +M +RGC P+ + Y +LI R + + +KL+ EM + AP
Sbjct: 168 RNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTV 227
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQD 571
V+YTS+I + +D+ ++ L++
Sbjct: 228 VTYTSLINGLCGSK-----------------------------------NVDEAMRYLEE 252
Query: 572 MKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
MK +G + Y S + + G LQA L E
Sbjct: 253 MKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 6/222 (2%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
AVVNG KR A+ K+ + E V Y++VI++ C+ + A +F EME K
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G V+ YSS+I GR +A +L++ M ER PN+ +++LID ++ L +
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAY---SKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
EKL+ EM +R + P+ +Y+S+I + + GE + EL V+ +
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY---NTL 399
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
+ F K ++D+ ++L ++M G + Y + + F +A
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQA 441
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 5/299 (1%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y ++ K D + + L ++ E+ + + IY + +SL K +AL F
Sbjct: 221 YGAVVNGLCKRGDTDLALNLLNKMEAAKIEANV----VIYSTVIDSLCKYRHEDDALNLF 276
Query: 291 RVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE 349
M KG+ + + YS+LI + + + LL + R + + L+ +V++
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 350 DLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
L K ++ E M + +++NGF A + E +I + P VTY
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE 469
++IN +C+ + +K ++F EM Q+G V Y+++I + ++ NA + +M
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 456
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
G PN+ YN L+D + L + ++ ++R + PD +Y MI KAG+++
Sbjct: 457 VGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 148/330 (44%), Gaps = 5/330 (1%)
Query: 282 RVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
R+S+A+ M + G +V ++TLI +K E L+ R D Y
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
+V + + L ++ M+ A ++ + V++ K R A+ + ++ ++
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G P +TY+S+I+ C +++ A ++ +M ++ + +V +S++I + + G+L A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
KL +M +R PN++ Y+SLI+ L + +++ M R+ P+ V+Y ++I
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
+ KA + ELF E G V + ++ F + D + + M G +
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 462
Query: 581 QRLYQSAWNAFIEAGLQLQA----KWLQES 606
Y + + G +A ++LQ S
Sbjct: 463 ILTYNILLDGLCKNGKLAKAMVVFEYLQRS 492
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 158/338 (46%), Gaps = 2/338 (0%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
+G+L + + G + ++ + +T+ G + V Y+TLI ++ + ++L E
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
+ + Y L+ + + ++ E+ E M++ V V+N K
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A + ++++ +G VTY ++I CR + N+A KV ++M+ G + ++ Y+++I
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLI 345
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
+ G+L A+ L +K RG P++ YN L+ R+ + K+ EM+ R +
Sbjct: 346 DGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK 405
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
P KV+YT +I ++++ E +L G V D +++ F GQ+++ +L
Sbjct: 406 PSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465
Query: 569 LQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA-KWLQE 605
+ M + ++ +Y + + + G +A K L+E
Sbjct: 466 FKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 181/395 (45%), Gaps = 26/395 (6%)
Query: 138 KKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFG 197
K +D ++ ++E + P+ + LI+ C ++ + + A+ L E+
Sbjct: 181 KSFDLLIELTE----FGFSPNVVIYTTLIDGCCKKGEIEKAKDLF------FEMGKLGLV 230
Query: 198 SALRNYNKL--HMFRRTVL-----VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKL 250
+ R Y L +F+ V ++EK++ + V + Y+ +M K + ++
Sbjct: 231 ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQV 290
Query: 251 FHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLIC 309
F E R + + + G LC + +++EA + M GI + + Y+TLI
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREM----KLNEANKVVDQMKSDGINPNLITYNTLID 346
Query: 310 SFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKV 369
F + K+G+ L R+ KSR Y LV + + ++V+ M++ +K
Sbjct: 347 GFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKP 406
Query: 370 CDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
+++ F++ A++ + G P TY+ +I+ +C Q N+A ++F
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
+ M +K + V Y++MI+ Y + G A+KL+ +M+E+ PNV Y +I++ +E
Sbjct: 467 KSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKE 526
Query: 490 KNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
+ ++ E+L +M + P TS++ S+A
Sbjct: 527 RKSKEAERLVEKMIDSGIDPS----TSILSLISRA 557
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 105/231 (45%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++NG K YEK+ G P TY V+N C+ + A +VF+EM ++
Sbjct: 238 VLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRER 297
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G +V Y+++I R +L A K+V +MK G PN+ YN+LID L +
Sbjct: 298 GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKA 357
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
L ++K R ++P V+Y ++ + + G+ ++ E G + I++
Sbjct: 358 LSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDT 417
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQES 606
F++ +++ ++L M+ G D Y + F G +A L +S
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/213 (18%), Positives = 97/213 (45%), Gaps = 5/213 (2%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++N + + + + ++ + +++ G+ PG + ++ S +N+ F E + K
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 436 GFDKCVVAYSSMIVMYG--RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+ YS I++ G +G + + L+ ++ E G PNV +Y +LID ++ +
Sbjct: 159 ---VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+ + L+ EM + + ++ +YT +I K G + E++ + + +G + ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
K G+ ++ +M+ G + Y +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNT 308
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 166/411 (40%), Gaps = 75/411 (18%)
Query: 200 LRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESR-- 257
L+ Y K+ M + F++ + ++ LD Y+ +A SKL E +L E + R
Sbjct: 360 LQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGI 419
Query: 258 --------NLRDSKRYLGQI---------------------YGVLCESLGKCGRVSEALE 288
L D G++ Y VL L + G E LE
Sbjct: 420 VPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
Query: 289 YFRVMTKKGIFESSVYSTLIC-SFASLHKVGEVEELL----------------------- 324
+ M +G ++V +++I KV E E+
Sbjct: 480 IYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGL 539
Query: 325 --REAKSRTKIKDP---EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVN 379
+ K+ +++ P VY+KL E LEK +V++ M V+ M ++
Sbjct: 540 SKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIG 599
Query: 380 GFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDK 439
F K A ++ ++ +G P TY +I+ YCRL++ KAE +FE+M+Q+G
Sbjct: 600 AFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKP 659
Query: 440 CVVAYSSMIVMY--------------GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDM 485
VV Y+ ++ Y G G+ R A +++ + G +V Y LID
Sbjct: 660 DVVTYTVLLDRYLKLDPEHHETCSVQGEVGK-RKASEVLREFSAAGIGLDVVCYTVLIDR 718
Query: 486 HGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
+ NL Q +L++ M + PD V+YT++I +Y + G + L E
Sbjct: 719 QCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTE 769
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 135/325 (41%), Gaps = 19/325 (5%)
Query: 219 LKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI-YGVLCESL 277
LK N V++ S I++ Y K+D C ++ F EF RD +L ++ Y V ++L
Sbjct: 349 LKVNCVIV-----SLILQCYCKMDMCLEALEKFKEF-----RDMNIFLDRVCYNVAFDAL 398
Query: 278 GKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
K GRV EA E + M +GI + Y+TLI + KV + +L+ E D
Sbjct: 399 SKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDL 458
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEK 396
Y LV E+ LE+ E MK K ++ G F+ V+ E
Sbjct: 459 ITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLC----FARKVKEAED 514
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
S + AS + YC KA K F +E K V Y + G
Sbjct: 515 FFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYP-LRKSV--YIKLFFSLCIEGY 571
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
L A ++ KM +P + +I + N+R+ + L++ M R + PD +YT
Sbjct: 572 LEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTI 631
Query: 517 MIGAYSKAGEFETCTELFNEYRING 541
MI Y + E + LF + + G
Sbjct: 632 MIHTYCRLNELQKAESLFEDMKQRG 656
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 107/493 (21%), Positives = 200/493 (40%), Gaps = 56/493 (11%)
Query: 69 VDNVNNIAGSHQQYSNP------GTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRP 122
++N NN++ S QQ N L L DP LA + ++LK+ V P
Sbjct: 32 LNNPNNLSDSEQQQVNHLNLSKLTQHGLQRLLNSTRDDPN---LALSFLRQLKEHGV-SP 87
Query: 123 EKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPD-------GATCSKLIEFCIRQRKF 175
+ ++R L W D K+ VL + G T LIE Q
Sbjct: 88 NVNAYATLVRIL---TTWGL------DIKLDSVLVELIKNEERGFTVMDLIEVIGEQ--- 135
Query: 176 KIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIM 235
AE K S V + G+ ++ Y L MF V + K V+D + + +M
Sbjct: 136 --AEE-----KKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLM 188
Query: 236 EAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK 295
++ ++ LF + + L ++ Y ++ ++L + G + EA ++
Sbjct: 189 NRMTEFGKIGMLMTLFKQLKQLGLCANE----YTYAIVVKALCRKGNLEEA--AMLLIEN 242
Query: 296 KGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKI--KDPEVYLKLVIM-YVEEDLL 352
+ +F Y T I + + L+ E R + D L +V+ + E +
Sbjct: 243 ESVFG---YKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKM 299
Query: 353 EKTLEVVEAMKDA----DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
+ V+ M++ DV C AV++ + K A+ +K++ +G + V
Sbjct: 300 KAAESVIIEMEEIGFGLDVYAC----LAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVI 355
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
+ ++ YC++ +A + F+E V Y+ + GR+ A +L+ +MK
Sbjct: 356 VSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMK 415
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
+RG P+V Y +LID + + + L +EM ++PD ++Y ++ ++ G E
Sbjct: 416 DRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEE 475
Query: 529 TCTELFNEYRING 541
E++ + G
Sbjct: 476 EVLEIYERMKAEG 488
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 38/239 (15%)
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPG---QVTYASVINAYCRLSQYNKAEKVFEEMEQ 434
+NG AV +LI + Y G + V+ +C + AE V EME+
Sbjct: 252 INGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEE 311
Query: 435 KGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV---------------- 478
GF V A ++I Y ++ L A+ + KM +G K N +
Sbjct: 312 IGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLE 371
Query: 479 -------------------YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
YN D + + + +L EMK R + PD ++YT++I
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
Y G+ +L +E NG D ++V ++ G ++++++ + MK EG +
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK 490
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 105/266 (39%), Gaps = 42/266 (15%)
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
Y + D+ + LE + +D ++ + + SK A +++ +G P
Sbjct: 363 YCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPD 422
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
+ Y ++I+ YC + A + +EM G ++ Y+ ++ R+G +++
Sbjct: 423 VINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYE 482
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
+MK G KPN + +I+ + +++ E ++ ++ +K +K S+ + Y +AG
Sbjct: 483 RMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLE-QKCPENKASF---VKGYCEAG 538
Query: 526 E------------------------FETCTELFNE-----------YRINGGVIDRAMAG 550
F C E + E YR+ G R+M G
Sbjct: 539 LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPG---RSMCG 595
Query: 551 IMVGVFSKVGQIDQLVKLLQDMKMEG 576
M+G F K+ + + L M G
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERG 621
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 114/234 (48%)
Query: 353 EKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASV 412
E L ++ M++ +K + A+++ K A + ++ +G P +TY+ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
I+++CR ++ AE++ +M ++ + VV +S++I + G++ A ++ M RG
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
P YNS+ID ++ L +++ + M + +PD V+++++I Y KA + E
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
+F E G V + ++ F +VG +D LL M G + +QS
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQS 291
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 40/298 (13%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y I+ K+ D ES + L + E +++ IY + + L K G A F
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHV----VIYNAIIDRLCKDGHHIHAQNLF 99
Query: 291 RVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE 349
M KGIF + YS +I SF + + E+LLR
Sbjct: 100 TEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLR------------------------ 135
Query: 350 DLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
D++E+ + + DV A++N K S A Y ++ +G P +TY
Sbjct: 136 DMIERQI-------NPDVVT----FSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITY 184
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE 469
S+I+ +C+ + N A+++ + M K VV +S++I Y ++ R+ N M++ +M
Sbjct: 185 NSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 244
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
RG N Y +LI + +L + L N M VAP+ +++ SM+ + E
Sbjct: 245 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 101/220 (45%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++NG K +A+ K+ + V Y ++I+ C+ + A+ +F EM K
Sbjct: 46 TIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK 105
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G V+ YS MI + RSGR +A +L+ M ER P+V +++LI+ +E + +
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEA 165
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
E+++ +M RR + P ++Y SMI + K + + D ++
Sbjct: 166 EEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLING 225
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ K ++D +++ +M G + Y + + F + G
Sbjct: 226 YCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVG 265
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 138/323 (42%), Gaps = 9/323 (2%)
Query: 218 KLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESL 277
+L S+ D Y+ +M Y K+ LF + + ++ S + LCES
Sbjct: 364 ELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES- 422
Query: 278 GKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
G + A MT + IF + Y+TL+ F + E+ E + D
Sbjct: 423 ---GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 479
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV-VNGFSKRRGFSAAVRAYE 395
Y + + +K + E M D D + V ++G K A+
Sbjct: 480 YAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQR 539
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
K+ G P VTY +VI Y Q+ A +++EM +K V+ Y +I + ++G
Sbjct: 540 KIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAG 599
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
RL A + +MK+RG +PNV +N+L+ + N+ + + +M+ + P+K SYT
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659
Query: 516 SMIGAYSKAGEFETCTELFNEYR 538
+I SK +FE E+ Y+
Sbjct: 660 MLI---SKNCDFEKWEEVVKLYK 679
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 183/430 (42%), Gaps = 55/430 (12%)
Query: 208 MFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLG 267
M + V+E + + ++ ++ ++++ K D E V K++ E + RN+ S+
Sbjct: 218 MMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSE---- 273
Query: 268 QIYGVLCESLGKCGRVSEALEYFRVMT-------------------KKGIFE-------- 300
Y +L K G++ EA + M K+G+F+
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 301 ---------SSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV--YLKLVIMYVEE 349
+S Y+ IC+ ++ + ELL + + P+V Y L+ Y++
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELL------SSMAAPDVVSYNTLMHGYIKM 387
Query: 350 DLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
+ + + ++ D+ +++G + A R E++ +Q P +TY
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM-K 468
+++ + + + A +V++EM +KG AY++ V R G A +L +M
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
P++ +YN ID + NL + + ++ R + PD V+YT++I Y + G+F+
Sbjct: 508 TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 529 TCTELFNEY---RINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
L++E R+ VI +++ +K G+++Q + +MK G R + +
Sbjct: 568 MARNLYDEMLRKRLYPSVITYF---VLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHN 624
Query: 586 SAWNAFIEAG 595
+ +AG
Sbjct: 625 ALLYGMCKAG 634
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 6/212 (2%)
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
++EK+I +G+ P V+ NKA V+E M + G V+ +++M+
Sbjct: 190 SFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCF 249
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
++G L K+ +MK R + + YN LI+ + + + + +M+R A
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 513 SYTSMIGAYSKAGEFETCTELFNEYRINGGVID-RAMAGIMVGVFSKVGQIDQLVKLLQD 571
S+ +I Y K G F+ + +E +N G+ + I + G+ID +LL
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEM-LNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368
Query: 572 MKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
M D Y + + +I+ G ++A L
Sbjct: 369 MAAP----DVVSYNTLMHGYIKMGKFVEASLL 396
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKP 474
Y + S K FE+M +KGF V + ++ + S + A + M E G P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 475 NVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
V +N+++D + +L +++K+W EMKRR + +V+Y +I +SK G+ E
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 535 NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
+ R +G + ++ + K G D + +M G
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 338
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 157/340 (46%), Gaps = 48/340 (14%)
Query: 279 KCGRVSEALEYFRVMTKKGIFES--SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
K ++++ +E F+ + F +YS I K ++E+L+ K IK
Sbjct: 63 KNSKLTQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSE 122
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDAD----VKVCDCMLCAVVNGFSKRRGFSAAVR 392
+ ++++++Y + E ++ + M + + VK + +L A VN + A++
Sbjct: 123 DFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNS----KKLDEAMK 178
Query: 393 AYEKLISQ-GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
+++L + G P VTY ++I A CR + +FEE+E+ GF+ ++++++++ +
Sbjct: 179 TFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEF 238
Query: 452 -----------------------------------GRSGRLRNAMKLVAKMKERGCKPNV 476
R+ + +A+ L+ MK G P+V
Sbjct: 239 YRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDV 298
Query: 477 WVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
YN+LI + + NL ++ K +NEMK + + PD V+Y +I K G+ + E+ +E
Sbjct: 299 HTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV-SE 357
Query: 537 YRINGGVIDRA-MAGIMVGVFSKVGQIDQLVKLLQDMKME 575
I ++ R M +V G+ID+ +L+++ K++
Sbjct: 358 EAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQ 397
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 92/178 (51%), Gaps = 1/178 (0%)
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
++ ++++AY + ++A K F+E+ +K G +V Y++MI R G + + + + +
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
+++ G +P++ +N+L++ R + + +++W+ MK + ++P+ SY S + ++ +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 527 FETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
F L + + G D ++ + +++++K +MK +G D Y
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 178/412 (43%), Gaps = 34/412 (8%)
Query: 188 DSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESV 247
DS VFA + + L + +L+ N + D ++E Y++L ES
Sbjct: 108 DSFNLVFAIKACV----GLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESA 163
Query: 248 VKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTL 307
K+F E RN ++GVL + K + E F +M G+ ++ TL
Sbjct: 164 QKVFDEIPVRN--------SVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDAL--TL 213
Query: 308 ICSFASLHKV--GEVEELLREAKSRTKIKDPEVYLK--LVIMYVEEDLLEKTLEVVEAMK 363
IC + V G+V + + R D YL+ ++ MYV+ LL+ ++ E
Sbjct: 214 ICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSV 273
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYN 423
D +V M +++GF+K A + +++ + P Q T A+++ + L
Sbjct: 274 DRNV----VMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLR 329
Query: 424 KAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
+ V M + G + V ++S I MY R G ++ A + M ER NV ++S+I
Sbjct: 330 HGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER----NVISWSSMI 385
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
+ G + +++MK + V P+ V++ S++ A S +G + + F + GV
Sbjct: 386 NAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGV 445
Query: 544 I-DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
+ + MV + + G+I + + +M + + SAW A + A
Sbjct: 446 VPEEEHYACMVDLLGRAGEIGEAKSFIDNMPV-------KPMASAWGALLSA 490
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 202/455 (44%), Gaps = 25/455 (5%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAF-KSDSEVAVFAFGSALRNYNKLHMFRRTVLV 215
P ++ + ++ F + + K AE ++++ + E V ++ S + + + R LV
Sbjct: 54 PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLV 113
Query: 216 FEKLKSNSVVL---DSRGYSHIMEAYSK---LDDCESVVKLFHEFESRNLRDSKRYLGQI 269
E L+++ + D ++ + +SK LD+ + + + S N+
Sbjct: 114 LESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNV--------VT 165
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKS 329
Y ++ K G + AL+ F M + + + V T C K G++E + K
Sbjct: 166 YSTWIDTFCKSGELQLALKSFHSMKRDALSPNVV--TFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 330 RTKIK---DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
+++ + Y L+ + ++ +++ E+ M + V+ + +++GF +R
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
A++ K+++QG Y +I+ C + +A ++ E+ME+ +V +++
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
M+ Y +SGR++ A+ + K+ ERG +P+V +++ID G KN + E + +
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMID--GIAKNGQLHEAIVYFCIEK- 400
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
+ V YT +I A K G+F LF++ G V D+ M + K G +
Sbjct: 401 --ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
Query: 567 KLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
KL M EG LD Y + GL ++A+
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEAR 493
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/496 (20%), Positives = 203/496 (40%), Gaps = 48/496 (9%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
+ P +S+ V+ ++ + + F + + PD + + LI+ R + A
Sbjct: 52 YTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS 111
Query: 180 TLLNAFKSD----SEVAVFAFGSALRNYNKLHMFRRTVLV-------------------- 215
+L + ++ + + +F S ++K+ M +
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWID 171
Query: 216 --------------FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRD 261
F +K +++ + ++ +++ Y K D E V L+ E R +R
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM--RRVRM 229
Query: 262 SKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEV 320
S + Y L + K G + A E + M + + +S VY+T+I F
Sbjct: 230 SLNVV--TYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNA 287
Query: 321 EELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNG 380
+ L + ++ D Y ++ L++ E+VE M+ +D+ + ++N
Sbjct: 288 MKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNA 347
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+ K AAV Y KLI +G+EP V +++I+ + Q ++A F +K D
Sbjct: 348 YFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF--CIEKAND-- 403
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
V Y+ +I + G +L +K+ E G P+ ++Y S I ++ NL KL
Sbjct: 404 -VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKT 462
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
M + + D ++YT++I + G ++F+E +G D A+ +++ + K G
Sbjct: 463 RMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Query: 561 QIDQLVKLLQDMKMEG 576
+ LL DM+ G
Sbjct: 523 NMAAASDLLLDMQRRG 538
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 125/268 (46%), Gaps = 10/268 (3%)
Query: 277 LGKCGRV------SEALEYFRVMTKKGIFE---SSVYSTLICSFASLHKVGEVEELLREA 327
+ KCG V ++L +F T + ++ Y+ +I + + L+
Sbjct: 118 IEKCGSVRHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLM 177
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
KSR E + L+ YV L + + M+D V++ S++R
Sbjct: 178 KSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRA 237
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
S A ++ L + +EP + Y +++ +CR + ++AEKVF+EM+ G + V YS +
Sbjct: 238 SEAQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIV 296
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I R G++ A + A M + GC PN +N+L+ +H + ++ +++N+MK+
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFN 535
PD ++Y +I A+ + E ++ N
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLN 384
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 100/196 (51%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+V G+ + S A + ++++ G EP TY+ VI+A CR Q ++A VF +M G
Sbjct: 261 LVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSG 320
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ +++++ ++ ++GR +++ +MK+ GC+P+ YN LI+ H R++NL
Sbjct: 321 CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAV 380
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
K+ N M ++K + ++ ++ K + ++++ + I++ +F
Sbjct: 381 KVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMF 440
Query: 557 SKVGQIDQLVKLLQDM 572
D ++K+ ++M
Sbjct: 441 VGSKSTDMVLKMKKEM 456
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/421 (21%), Positives = 175/421 (41%), Gaps = 51/421 (12%)
Query: 163 SKLIEFCIRQRKFKIAETLLNAFKS-DSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKS 221
+++I+ + R+F +A L++ KS + E+++ F +R Y + + V F +++
Sbjct: 155 NEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMED 214
Query: 222 NSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCG 281
V D +S ++ S+ F + R D Y + G C + G
Sbjct: 215 YGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRG-WC----RAG 269
Query: 282 RVSEALEYFRVMTKKGIFESSVY--STLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
+SEA + F+ M GI E +VY S +I + ++ ++ + + +
Sbjct: 270 EISEAEKVFKEMKLAGI-EPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
L+ ++V+ EK L+V MK KL
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMK--------------------------------KL-- 354
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
G EP +TY +I A+CR A KV M +K KC V S+ ++ + R+
Sbjct: 355 -GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKK---KCEVNASTFNTIFRYIEKKRD 410
Query: 460 ---AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
A ++ +KM E C+PN YN L+ M K+ + K+ EM ++V P+ +Y
Sbjct: 411 VNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRL 470
Query: 517 MIGAYSKAGEFETCTELFNEYRINGGVIDR-AMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
++ + G + +LF E + ++ +++ + GQ+ + +L++ M +
Sbjct: 471 LVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQK 530
Query: 576 G 576
G
Sbjct: 531 G 531
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 118/239 (49%), Gaps = 1/239 (0%)
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
K P Y +++ + + + +++ MK +V++ ++ + + S AV
Sbjct: 149 KSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHC 208
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+ ++ G P ++ ++ VI+ R + ++A+ F+ ++ + F+ V+ Y++++ + R
Sbjct: 209 FNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLVRGWCR 267
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
+G + A K+ +MK G +PNV+ Y+ +ID R + + ++ +M AP+ ++
Sbjct: 268 AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAIT 327
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
+ +++ + KAG E +++N+ + G D ++ + ++ VK+L M
Sbjct: 328 FNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 144/358 (40%), Gaps = 53/358 (14%)
Query: 153 YHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRT 212
Y +PD S +I R+R+ A++ ++ K E V + + +R + +
Sbjct: 215 YGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEA 274
Query: 213 VLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGV 272
VF+++K + + YS +++A
Sbjct: 275 EKVFKEMKLAGIEPNVYTYSIVIDA----------------------------------- 299
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKV----GEVEELLREAK 328
LC +CG++S A + F M G +++ +F +L +V G E++L+
Sbjct: 300 LC----RCGQISRAHDVFADMLDSGCAPNAI------TFNNLMRVHVKAGRTEKVLQVYN 349
Query: 329 SRTKI---KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRR 385
K+ D Y L+ + ++ LE ++V+ M +V + K+R
Sbjct: 350 QMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKR 409
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
+ A R Y K++ EP VTY ++ + + K+ +EM+ K + V Y
Sbjct: 410 DVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYR 469
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGC-KPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
++ M+ G NA KL +M E C P++ +Y ++ R L++ E+L +M
Sbjct: 470 LLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 94/212 (44%), Gaps = 5/212 (2%)
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
K R F A + + S+ E T+ +I Y R ++A F ME G +
Sbjct: 163 KVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI 222
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
A+S +I R R A +K+R +P+V VY +L+ R + + EK++ EM
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSLKDRF-EPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
K + P+ +Y+ +I A + G+ ++F + +G + ++ V K G+
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRT 341
Query: 563 DQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
++++++ MK G D Y N IEA
Sbjct: 342 EKVLQVYNQMKKLGCEPDTITY----NFLIEA 369
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 122/243 (50%), Gaps = 11/243 (4%)
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKV----CDCML-CAVVNGFSKRRGFSAAVRAYEKLI 398
I +V + K LE+ +++ D K+ C+ +L C V NG + ++ ++++
Sbjct: 139 IKFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNG-----KLDSCIKLFDQMK 193
Query: 399 SQGYEPGQVTYASVINAYCRLSQ-YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRL 457
G +P VTY +++ ++ Y KA ++ E+ G V Y +++ + +GR
Sbjct: 194 RDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRS 253
Query: 458 RNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSM 517
A + +MK G PN++ Y+SL++ + + + ++ ++L EMK + P+KV T++
Sbjct: 254 EEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTL 313
Query: 518 IGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
+ Y K G F+ EL +E G + +++ SK G++++ + DMK +G
Sbjct: 314 LKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
Query: 578 RLD 580
R D
Sbjct: 374 RSD 376
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 151/372 (40%), Gaps = 43/372 (11%)
Query: 268 QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREA 327
Q V+ G GR + ++ F M + G S YS+ I F V + E+ +
Sbjct: 99 QDLNVILRDFGISGRWQDLIQLFEWMQQHGKISVSTYSSCI-KFVGAKNVSKALEIYQSI 157
Query: 328 KSR-TKIKDPEVYL--KLVIMYVEEDLLEKTLEVVEAMK----DADVKVCDCMLCAVV-- 378
TKI VY+ ++ V+ L+ +++ + MK DV + +L +
Sbjct: 158 PDESTKI---NVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKV 214
Query: 379 -NGFSK---------RRGFSAAVRAY----------------EKLISQ----GYEPGQVT 408
NG+ K G Y E I Q G+ P
Sbjct: 215 KNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYH 274
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y+S++N+Y Y KA+++ EM+ G V ++++ +Y + G + +L+++++
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
G N Y L+D + L + ++++MK + V D + + MI A ++ F+
Sbjct: 335 SAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFK 394
Query: 529 TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAW 588
EL + D M M+ + + G+++ ++++++ M + D +
Sbjct: 395 EAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILI 454
Query: 589 NAFIEAGLQLQA 600
FI+ L L A
Sbjct: 455 KYFIKEKLHLLA 466
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 190/448 (42%), Gaps = 49/448 (10%)
Query: 196 FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSK---LDDCESVVKLFH 252
G L+ Y K+ V + N + L+ +S ++ AY K +DDC +++
Sbjct: 456 LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLR--- 512
Query: 253 EFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALE-YFRVMTKKGIFESSVYSTLICSF 311
+ RDS + +Y +L S + G++++A++ Y M + ST+I +
Sbjct: 513 ---EKKWRDSA-FESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIY 568
Query: 312 ASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD-----AD 366
+ + E E+L KS + D + +V MYV+ LE+ V+E M + D
Sbjct: 569 TVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPD 628
Query: 367 VKV----------CDC---------------------MLCAVVNGFSKRRGFSAAVRAYE 395
V + CD M V+N ++ +E
Sbjct: 629 VYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFE 688
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
++I G+ P VT+ +++ Y + + K ++F ++ G V++Y+++I YG++
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVD-VISYNTIIAAYGKNK 747
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
N + M+ G ++ YN+L+D +G++K + + + MK+ PD +Y
Sbjct: 748 DYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYN 807
Query: 516 SMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
MI Y + G + ++ E + +G D ++ + G +++ V L+++M+
Sbjct: 808 IMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 576 GTRLDQRLYQSAWNAFIEAGLQLQA-KW 602
D+ Y + A L+A KW
Sbjct: 868 NIIPDKVTYTNLVTALRRNDEFLEAIKW 895
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 173/400 (43%), Gaps = 26/400 (6%)
Query: 134 LMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLN-AFKSDSEVA 192
L+R KKW + + +YH+L CS C + A + N +SD E+
Sbjct: 510 LLREKKWR---DSAFESHLYHLL----ICS-----CKESGQLTDAVKIYNHKMESDEEIN 557
Query: 193 VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFH 252
+ + + Y + F ++ LKS+ VVLD G+S ++ Y K E +
Sbjct: 558 LHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLE 617
Query: 253 EFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLI--C 309
+ + YL + + KC + + + K GI + +Y+ +I C
Sbjct: 618 IMDEQKDIVPDVYL---FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCC 674
Query: 310 SFA-SLHKV-GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADV 367
+ A L ++ G EE++R + + + L+ +Y + L +K E+ K V
Sbjct: 675 ARALPLDELSGTFEEMIRYGFTPNTV----TFNVLLDVYGKAKLFKKVNELFLLAKRHGV 730
Query: 368 KVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEK 427
V ++ + K + ++ A + + G+ Y ++++AY + Q K
Sbjct: 731 -VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRS 789
Query: 428 VFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHG 487
+ + M++ Y+ MI +YG G + ++ ++KE G P++ YN+LI +G
Sbjct: 790 ILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYG 849
Query: 488 REKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
+ + L EM+ R + PDKV+YT+++ A + EF
Sbjct: 850 IGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 158/380 (41%), Gaps = 54/380 (14%)
Query: 236 EAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK 295
E + + +D + FHEF+ K Y Q++ + + K G V A ++F +M +
Sbjct: 188 EEWDRAEDLIKELCGFHEFQ-------KSY--QVFNTVIYACTKKGNVKLASKWFHMMLE 238
Query: 296 KGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKT 355
G+ + ++ + E E + I Y ++ +Y L +K
Sbjct: 239 FGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKA 298
Query: 356 LEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINA 415
EV++ MK V++ KL + ++NA
Sbjct: 299 EEVIDLMKQDRVRL--------------------------KL---------ENWLVMLNA 323
Query: 416 YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN 475
Y + + AE + ME GF ++AY+++I YG+ ++ A L ++ G +P+
Sbjct: 324 YSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPD 383
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
Y S+I+ GR N + + + E+KR P+ + ++I +K G+ + +
Sbjct: 384 ETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIE 443
Query: 536 EYRING-GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIE- 593
+ + G G ++ GI++ + KVG+ID + +L+ RL+Q + S A+++
Sbjct: 444 D--MTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKH 501
Query: 594 ------AGLQLQAKWLQESF 607
GL + KW +F
Sbjct: 502 GMVDDCLGLLREKKWRDSAF 521
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 162/353 (45%), Gaps = 22/353 (6%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
++ ++ A +K + + K FH +R + +G + G+ K V EA F
Sbjct: 213 FNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLY----QKNWNVEEAEFAF 268
Query: 291 RVMTKKGIFESSVYSTLICSFASLH---KVGEVEELLREAKSRTKIKDPEVYLKLVIMYV 347
M K GI S YS++I + L K EV +L+++ + R K+ E +L ++ Y
Sbjct: 269 SHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKL---ENWLVMLNAYS 325
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
++ +E ++ +M+ A ++ G+ K AA + +L + G EP +
Sbjct: 326 QQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDET 385
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
+Y S+I + R Y +A+ ++E+++ G+ ++I + + G A+K + M
Sbjct: 386 SYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDM 445
Query: 468 KERGCKPNVWVYNSL--IDMHGREKNLRQLEKLWNEMK---RRKVAPDKVSYTSMIGAYS 522
GC+ Y+S+ I + EK + +++ + +K + ++ S++S++ AY
Sbjct: 446 TGIGCQ-----YSSILGIILQAYEK-VGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYV 499
Query: 523 KAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
K G + C L E + + + +++ + GQ+ VK+ + KME
Sbjct: 500 KHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIY-NHKME 551
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/485 (20%), Positives = 209/485 (43%), Gaps = 15/485 (3%)
Query: 107 AFDYYQRLKDRPVFRPEKSTLKHVIRYLMRF----KKWDFILSVSEDFKIYHVLPDGATC 162
A Y++ +K V RP+ +T +I L + + D S+ E K PD T
Sbjct: 135 ALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE--KRAECRPDVVTF 191
Query: 163 SKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVL-VFEKLKS 221
+ ++ + + + + A ++ +AL +H T L V +K
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 222 NSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI-YGVLCESLGKC 280
N ++ D Y+ ++ +Y + ++F +R +R + Y L ++ G
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM-----MRKERRKPNVVTYNALIDAYGSN 306
Query: 281 GRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
G ++EA+E FR M + GI + V TL+ + + K V+ +L A+SR + Y
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
+ Y+ LEK + + ++M+ VK +++G + + A+ +++
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+ Y+SV+ AY + Q +AE +F +M+ G + V+AY+SM+ Y S +
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
A +L +M+ G +P+ ++L+ + + L + M+ +++ + +
Sbjct: 487 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 546
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
A + E++ +L + + M+ +F K G+++ ++KL + G +
Sbjct: 547 ACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGI 606
Query: 580 DQRLY 584
+ + Y
Sbjct: 607 NLKTY 611
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 195/492 (39%), Gaps = 43/492 (8%)
Query: 121 RPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAET 180
+P+ T +I R +W + +++ +D + P +T + LI C ++ A
Sbjct: 43 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 102
Query: 181 LLNAFKSDSEVA--VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAY 238
+ +D+ V + L Y + + + FE +K V D+ ++ I+
Sbjct: 103 VCKKM-TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 161
Query: 239 SKLDDCESVVKLFHEFESRNLR--------DSKRYL----GQI----------------- 269
SKL + LF+ + S +L G+I
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 270 ----YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELL 324
Y L + G AL + + GI V Y+ L+ S+ + G+ +E+
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 325 REAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK---VCDCMLCAVVNGF 381
+ + + Y L+ Y L + +E+ M+ +K V C L A +
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 341
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
K+ + A + S+G Y S I +Y ++ KA +++ M +K
Sbjct: 342 KKKVNVDTVLSAAQ---SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
V ++ +I R + A+ + +M++ VY+S++ + ++ + + E ++N+
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 458
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
MK PD ++YTSM+ AY+ + ++ ELF E NG D ++ F+K GQ
Sbjct: 459 MKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 518
Query: 562 IDQLVKLLQDMK 573
+ L+ M+
Sbjct: 519 PSNVFVLMDLMR 530
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 150/327 (45%), Gaps = 4/327 (1%)
Query: 279 KCGR-VSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
K GR S+AL YF +M + +++ ++ +I + L + + +L + + P
Sbjct: 127 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 186
Query: 337 EV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
+V + ++ +Y + +E V EAM +K A++ ++ A+
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 246
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+ G P V+Y ++N+Y R Q KA++VF M ++ VV Y+++I YG +
Sbjct: 247 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
G L A+++ +M++ G KPNV +L+ R K ++ + + + R + + +Y
Sbjct: 307 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 366
Query: 515 TSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKM 574
S IG+Y A E E L+ R D I++ ++ + + + L++M+
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 575 EGTRLDQRLYQSAWNAFIEAGLQLQAK 601
L + +Y S A+ + G +A+
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAE 453
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 183/451 (40%), Gaps = 32/451 (7%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKL-------HMF 209
PD T LI R +++ A L++ ++ A + YN L +
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMD------DMLRAAIAPSRSTYNNLINACGSSGNW 97
Query: 210 RRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI 269
R + V +K+ N V D ++ ++ AY + F + +R
Sbjct: 98 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT----TT 153
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKV-GEVEE--LLRE 326
+ ++ L K G+ S+AL+ F M +K E S L+ V GE+E + E
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRA-ECRPDVVTFTSIMHLYSVKGEIENCRAVFE 212
Query: 327 AKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNG 380
A +K P + Y L+ Y + L V+ +K DV C+L N
Sbjct: 213 AMVAEGLK-PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL----NS 267
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+ + R A + + + +P VTY ++I+AY +A ++F +MEQ G
Sbjct: 268 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
VV+ +++ RS + N +++ + RG N YNS I + L + L+
Sbjct: 328 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
M+++KV D V++T +I + ++ E + + + ++ +SK G
Sbjct: 388 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 447
Query: 561 QIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
Q+ + + MKM G D Y S +A+
Sbjct: 448 QVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 2/196 (1%)
Query: 403 EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMK 462
+P TY ++INA+ R Q+ A + ++M + Y+++I G SG R A++
Sbjct: 43 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 102
Query: 463 LVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYS 522
+ KM + G P++ +N ++ + + + + MK KV PD ++ +I S
Sbjct: 103 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLS 162
Query: 523 KAGEFETCTELFNEYRINGGVI--DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
K G+ +LFN R D ++ ++S G+I+ + + M EG + +
Sbjct: 163 KLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPN 222
Query: 581 QRLYQSAWNAFIEAGL 596
Y + A+ G+
Sbjct: 223 IVSYNALMGAYAVHGM 238
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%)
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y +I + R + ++A +F EM++ Y ++I +GR+G+ R AM L+ M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
P+ YN+LI+ G N R+ ++ +M V PD V++ ++ AY ++
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 529 TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
F + D I++ SK+GQ Q + L M+
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMR 178
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
Y+ MI ++ R + A L +M++ CKP+ Y++LI+ HGR R L ++M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
R +AP + +Y ++I A +G + E+ + NG D I++ + Q
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 564 QLVKLLQDMKMEGTRLDQRLYQ 585
+ + + MK R D +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFN 155
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 137/339 (40%), Gaps = 16/339 (4%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
V +S + L++ Y+ + +Y + E + L+ + ++ + +L
Sbjct: 350 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS----VTFTILI 405
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ + EA+ Y + M I VYS+++C+++ +V E E + + K
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 465
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D Y ++ Y + K E+ M+ ++ A++ F+K G + V
Sbjct: 466 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG-GQPSNVFV 524
Query: 394 YEKLISQGYEP--GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
L+ + P G V + + +A L ++ +A + + M+ + + M+ ++
Sbjct: 525 LMDLMREKEIPFTGAVFF-EIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLF 583
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
G+SG++ MKL K+ G N+ Y L++ N R+ ++ M + P
Sbjct: 584 GKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSN 643
Query: 512 VSYTSMI--GAYSKAGEFETCT-----ELFNEYRINGGV 543
Y +I G S EFE E+ E +IN V
Sbjct: 644 QMYRDIISFGERSAGIEFEPLIRQKLGEMREECKINDSV 682
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 116/239 (48%)
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
DP V+ LV Y++ L+E+ V + D+ V ++NG K + Y
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+ G P T+ + N +C S + + + E+ME++GF+ +V Y++++ Y R
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
GRL+ A L M R P++ Y SLI ++ +R+ + ++ M R + PD +SY
Sbjct: 285 GRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSY 344
Query: 515 TSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
++I AY K G + +L +E N V DR ++V F + G++ V + +++
Sbjct: 345 NTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELR 403
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+V G+ K R + +++ G+ VT ++N +L +V+ M + G
Sbjct: 172 LVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVG 231
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
++ + ++ R + KM+E G +P++ YN+L+ + R L++
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
L+ M RR+V PD V+YTS+I K G + F+ G D ++ +
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
K G + Q KLL +M D+ + F+ G L A
Sbjct: 352 CKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/363 (19%), Positives = 135/363 (37%), Gaps = 43/363 (11%)
Query: 288 EYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMY 346
+ + VM + GI ++ ++ L F + EV++ L + + D Y LV Y
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 347 VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQ 406
L++ + + M V +++ G K A + + +++ +G +P
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
++Y ++I AYC+ +++K+ EM ++ + R GRL +A+ V +
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Query: 467 MK------------------------------------ERGCKPNVWVYNSLIDMHGREK 490
++ E G + YN+LI+ R
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCD 461
Query: 491 NLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAG 550
+ + L ++K + D +Y ++IG + G L E + D + G
Sbjct: 462 AIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICG 521
Query: 551 IMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG------LQLQAKWLQ 604
+V + K D+ +LL ME D Y S A E G L+LQ + +
Sbjct: 522 ALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERMQR 581
Query: 605 ESF 607
F
Sbjct: 582 LGF 584
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 122/294 (41%), Gaps = 4/294 (1%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
Y L S + GR+ EA +++M ++ + V Y++LI +V E +
Sbjct: 274 YNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMV 333
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV-VNGFSKRRGF 387
R D Y L+ Y +E +++++ +++ M V V D C V V GF +
Sbjct: 334 DRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSV-VPDRFTCKVIVEGFVREGRL 392
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM-EQKGFDKCVVAYSS 446
+AV +L + +I + C+ + A+ + + + E++G + Y++
Sbjct: 393 LSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNN 452
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
+I R + A+ L K+K + + Y +LI R R+ E L EM +
Sbjct: 453 LIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSE 512
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
V PD +++ Y K +F+ L + + + + D +V + G
Sbjct: 513 VKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 173/411 (42%), Gaps = 5/411 (1%)
Query: 186 KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCE 245
KS ++F F L K+ F + + EK++ + + Y+ ++ + +
Sbjct: 3 KSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQIS 62
Query: 246 SVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-Y 304
+ L + S L + C GK R+S+A+ M + G ++ +
Sbjct: 63 LALALLGKMMKLGYEPSIVTLSSLLNGYCH--GK--RISDAVALVDQMVEMGYRPDTITF 118
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD 364
+TLI +K E L+ R + Y +V + ++ ++ M+
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 365 ADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNK 424
A ++ + +++ K R A+ ++++ ++G P VTY+S+I+ C +++
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 425 AEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
A ++ +M +K + +V ++++I + + G+ A KL M +R P+++ YNSLI+
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 485 MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVI 544
L + ++++ M + PD +Y ++I + K+ E TELF E G V
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 545 DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
D ++ G D K+ + M +G D Y + G
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/496 (19%), Positives = 204/496 (41%), Gaps = 14/496 (2%)
Query: 114 LKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQR 173
+K RP+ P ++ + + KK+D ++S+ E + + + T + LI R+
Sbjct: 2 VKSRPL--PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 174 KFKIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYS 232
+ +A LL K E ++ S L Y V + +++ D+ ++
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 233 HIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRV 292
++ + V L R + + YGV+ L K G + A
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNL----VTYGVVVNGLCKRGDIDLAFNLLNK 175
Query: 293 MTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDL 351
M I + +++T+I S V + L +E +++ + Y L+
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 352 LEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYAS 411
+++ M + + A+++ F K F A + ++ +I + +P TY S
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 412 VINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG 471
+IN +C + +KA+++FE M K + Y+++I + +S R+ + +L +M RG
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 472 CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
+ Y +LI + + +K++ +M V PD ++Y+ ++ G+ E
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415
Query: 532 ELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
E+F+ + + +D + M+ K G++D L + ++G + + Y + +
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Query: 592 IEAGLQLQAKWLQESF 607
+ LQE++
Sbjct: 476 C------SKRLLQEAY 485
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 165/386 (42%), Gaps = 41/386 (10%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ K+++ + D ++ I+++ K + + LF E E++ +R + + LC
Sbjct: 172 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC 231
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
GR S+A + M +K I + V ++ LI +F K E E+L + R+
Sbjct: 232 SY----GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID 287
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK---------- 383
D Y L+ + D L+K ++ E M D ++ GF K
Sbjct: 288 PDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTEL 347
Query: 384 -----RRGFSA--------------------AVRAYEKLISQGYEPGQVTYASVINAYCR 418
RG A + +++++S G P +TY+ +++ C
Sbjct: 348 FREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCN 407
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
+ KA +VF+ M++ + Y++MI ++G++ + L + +G KPNV
Sbjct: 408 NGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVT 467
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYR 538
YN++I ++ L++ L +MK PD +Y ++I A+ + G+ EL E R
Sbjct: 468 YNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Query: 539 INGGVIDRAMAGIMVGVFSKVGQIDQ 564
V D + G++ + G++D+
Sbjct: 528 SCRFVGDASTIGLVANMLHD-GRLDK 552
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 111/225 (49%), Gaps = 7/225 (3%)
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
E L ++ LE +K + + CA NG KR AV +EK+ S G EP VT
Sbjct: 195 EKLFDEMLE--RGIKPDNATFTTIISCARQNGVPKR-----AVEWFEKMSSFGCEPDNVT 247
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
A++I+AY R + A +++ + + V +S++I +YG SG + + +MK
Sbjct: 248 MAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMK 307
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
G KPN+ +YN LID GR K Q + ++ ++ P+ +Y +++ AY +A +
Sbjct: 308 ALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGD 367
Query: 529 TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
++ E + G + + ++ + + +D+ ++ QDMK
Sbjct: 368 DALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMK 412
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 173/416 (41%), Gaps = 25/416 (6%)
Query: 175 FKIAETLLNAFKSDSEV--AVFAFGS------ALRNYNKLHMFRRTVLVFEKL-----KS 221
K+AE+L ++++V + FG A+ N + LV L S
Sbjct: 113 IKLAESLDACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPS 172
Query: 222 NSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCG 281
V+L Y+ M+ + K D E KLF E R ++ I ++ G
Sbjct: 173 REVIL----YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQN----G 224
Query: 282 RVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
A+E+F M+ G +V + +I ++ V L A++ D +
Sbjct: 225 VPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFS 284
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
L+ +Y + L + E MK VK + +++ + + A Y+ LI+
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN 344
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G+ P TYA+++ AY R + A ++ EM++KG V+ Y++++ M + + A
Sbjct: 345 GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEA 404
Query: 461 MKLVAKMKE-RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
++ MK C P+ W ++SLI ++ + + E +M+ P TS+I
Sbjct: 405 FEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQ 464
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG--QIDQLVKLLQDMK 573
Y KA + + F++ G D G ++ V ++ +I +L+ ++ K
Sbjct: 465 CYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQTPSEEIGKLIGCVEKAK 520
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 19/204 (9%)
Query: 352 LEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEP------- 404
L K E ++A K + VCD V+ GF + AV + + P
Sbjct: 112 LIKLAESLDACKPNEADVCD-----VITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLL 166
Query: 405 -------GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRL 457
+ Y + + + K+EK+F+EM ++G ++++I ++G
Sbjct: 167 ETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVP 226
Query: 458 RNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSM 517
+ A++ KM GC+P+ ++ID +GR N+ L++ + K D V+++++
Sbjct: 227 KRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTL 286
Query: 518 IGAYSKAGEFETCTELFNEYRING 541
I Y +G ++ C ++ E + G
Sbjct: 287 IRIYGVSGNYDGCLNIYEEMKALG 310
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/485 (20%), Positives = 209/485 (43%), Gaps = 15/485 (3%)
Query: 107 AFDYYQRLKDRPVFRPEKSTLKHVIRYLMRF----KKWDFILSVSEDFKIYHVLPDGATC 162
A Y++ +K V RP+ +T +I L + + D S+ E K PD T
Sbjct: 267 ALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE--KRAECRPDVVTF 323
Query: 163 SKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVL-VFEKLKS 221
+ ++ + + + + A ++ +AL +H T L V +K
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 383
Query: 222 NSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI-YGVLCESLGKC 280
N ++ D Y+ ++ +Y + ++F +R +R + Y L ++ G
Sbjct: 384 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLM-----MRKERRKPNVVTYNALIDAYGSN 438
Query: 281 GRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
G ++EA+E FR M + GI + V TL+ + + K V+ +L A+SR + Y
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
+ Y+ LEK + + ++M+ VK +++G + + A+ +++
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+ Y+SV+ AY + Q +AE +F +M+ G + V+AY+SM+ Y S +
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
A +L +M+ G +P+ ++L+ + + L + M+ +++ + +
Sbjct: 619 ACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 678
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
A + E++ +L + + M+ +F K G+++ ++KL + G +
Sbjct: 679 ACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGI 738
Query: 580 DQRLY 584
+ + Y
Sbjct: 739 NLKTY 743
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 195/492 (39%), Gaps = 43/492 (8%)
Query: 121 RPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAET 180
+P+ T +I R +W + +++ +D + P +T + LI C ++ A
Sbjct: 175 KPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 234
Query: 181 LLNAFKSDSEVA--VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAY 238
+ +D+ V + L Y + + + FE +K V D+ ++ I+
Sbjct: 235 VCKKM-TDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 239 SKLDDCESVVKLFHEFESRNLR--------DSKRYL----GQI----------------- 269
SKL + LF+ + S +L G+I
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 270 ----YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELL 324
Y L + G AL + + GI V Y+ L+ S+ + G+ +E+
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 325 REAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK---VCDCMLCAVVNGF 381
+ + + Y L+ Y L + +E+ M+ +K V C L A +
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRS 473
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
K+ + A + S+G Y S I +Y ++ KA +++ M +K
Sbjct: 474 KKKVNVDTVLSAAQ---SRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
V ++ +I R + A+ + +M++ VY+S++ + ++ + + E ++N+
Sbjct: 531 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
MK PD ++YTSM+ AY+ + ++ ELF E NG D ++ F+K GQ
Sbjct: 591 MKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQ 650
Query: 562 IDQLVKLLQDMK 573
+ L+ M+
Sbjct: 651 PSNVFVLMDLMR 662
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 150/327 (45%), Gaps = 4/327 (1%)
Query: 279 KCGR-VSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
K GR S+AL YF +M + +++ ++ +I + L + + +L + + P
Sbjct: 259 KSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 318
Query: 337 EV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
+V + ++ +Y + +E V EAM +K A++ ++ A+
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVL 378
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+ G P V+Y ++N+Y R Q KA++VF M ++ VV Y+++I YG +
Sbjct: 379 GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 438
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
G L A+++ +M++ G KPNV +L+ R K ++ + + + R + + +Y
Sbjct: 439 GFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAY 498
Query: 515 TSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKM 574
S IG+Y A E E L+ R D I++ ++ + + + L++M+
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 575 EGTRLDQRLYQSAWNAFIEAGLQLQAK 601
L + +Y S A+ + G +A+
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAE 585
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 183/451 (40%), Gaps = 32/451 (7%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKL-------HMF 209
PD T LI R +++ A L++ ++ A + YN L +
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMD------DMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 210 RRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI 269
R + V +K+ N V D ++ ++ AY + F + +R
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDT----TT 285
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKV-GEVEE--LLRE 326
+ ++ L K G+ S+AL+ F M +K E S L+ V GE+E + E
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRA-ECRPDVVTFTSIMHLYSVKGEIENCRAVFE 344
Query: 327 AKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNG 380
A +K P + Y L+ Y + L V+ +K DV C+L N
Sbjct: 345 AMVAEGLK-PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLL----NS 399
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+ + R A + + + +P VTY ++I+AY +A ++F +MEQ G
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
VV+ +++ RS + N +++ + RG N YNS I + L + L+
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
M+++KV D V++T +I + ++ E + + + ++ +SK G
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQG 579
Query: 561 QIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
Q+ + + MKM G D Y S +A+
Sbjct: 580 QVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%)
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
Y+ MI ++ R + A L +M++ CKP+ Y++LI+ HGR R L ++M
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 205
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
R +AP + +Y ++I A +G + E+ + NG D I++ + Q
Sbjct: 206 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 265
Query: 564 QLVKLLQDMKMEGTRLDQRLYQ 585
+ + + MK R D +
Sbjct: 266 KALSYFELMKGAKVRPDTTTFN 287
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/319 (19%), Positives = 130/319 (40%), Gaps = 11/319 (3%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
V +S + L++ Y+ + +Y + E + L+ + ++ + +L
Sbjct: 482 VLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS----VTFTILI 537
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ + EA+ Y + M I VYS+++C+++ +V E E + + K
Sbjct: 538 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCE 597
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D Y ++ Y + K E+ M+ ++ A++ F+K G + V
Sbjct: 598 PDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKG-GQPSNVFV 656
Query: 394 YEKLISQGYEP--GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
L+ + P G V + + +A L ++ +A + + M+ + + M+ ++
Sbjct: 657 LMDLMREKEIPFTGAVFF-EIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLF 715
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
G+SG++ MKL K+ G N+ Y L++ N R+ ++ M + P
Sbjct: 716 GKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSN 775
Query: 512 VSYTSMI--GAYSKAGEFE 528
Y +I G S EFE
Sbjct: 776 QMYRDIISFGERSAGIEFE 794
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 146/336 (43%), Gaps = 37/336 (11%)
Query: 268 QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREA 327
IY ++ LG+ G + + LE F M +G+ SV+S
Sbjct: 142 HIYTIMISLLGREGLLDKCLEVFDEMPSQGV-SRSVFS---------------------- 178
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG- 386
Y L+ Y E +LE+++ MK+ + V+N + R G
Sbjct: 179 -----------YTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACA-RGGL 226
Query: 387 -FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
+ + + ++ +G +P VTY ++++A ++AE VF M G + YS
Sbjct: 227 DWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
++ +G+ RL L+ +M G P++ YN L++ + + ++++ ++++M+
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAA 346
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
P+ +Y+ ++ + ++G ++ +LF E + + D A I++ VF + G ++
Sbjct: 347 GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEV 406
Query: 566 VKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
V L DM E D Y+ A + GL A+
Sbjct: 407 VTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/491 (18%), Positives = 192/491 (39%), Gaps = 9/491 (1%)
Query: 105 ELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFK-KWDFILSVSEDFKIYHVLPDGATCS 163
E + + R+K+ + P T VI R W+ +L + + + + PD T +
Sbjct: 193 ETSLELLDRMKNEKI-SPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYN 251
Query: 164 KLIEFCIRQRKFKIAETLLNAFKSDSEVA-VFAFGSALRNYNKLHMFRRTVLVFEKLKSN 222
L+ C + AE + V + + + + KL + + ++ S
Sbjct: 252 TLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASG 311
Query: 223 SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGR 282
+ D Y+ ++EAY+K + + +FH+ ++ + Y VL G+ GR
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPN----ANTYSVLLNLFGQSGR 367
Query: 283 VSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
+ + F M +++ Y+ LI F EV L + D E Y
Sbjct: 368 YDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEG 427
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
++ + L E ++++ M D+ V+ F + + A+ A+ + G
Sbjct: 428 IIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
P T+ S++ ++ R ++E + + G + +++ I Y + G+ A+
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
K M++ C P+ +++ ++ + + + + + EMK + P + Y M+ Y
Sbjct: 548 KTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVY 607
Query: 522 SKAGEFETCTELFNEYRING-GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
K ++ EL E N I + + ++ G + + +L + EG L
Sbjct: 608 GKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLG 667
Query: 581 QRLYQSAWNAF 591
R Y + +A
Sbjct: 668 IRFYNALLDAL 678
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 141/359 (39%), Gaps = 11/359 (3%)
Query: 241 LDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFE 300
LD C +++F E S+ + S Y L + G+ GR +LE M + I
Sbjct: 157 LDKC---LEVFDEMPSQGVSRSVFS----YTALINAYGRNGRYETSLELLDRMKNEKISP 209
Query: 301 SSV-YSTLI--CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE 357
S + Y+T+I C+ L G + L E + D Y L+ L ++
Sbjct: 210 SILTYNTVINACARGGLDWEGLLG-LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEM 268
Query: 358 VVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC 417
V M D + +V F K R ++ S G P +Y ++ AY
Sbjct: 269 VFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA 328
Query: 418 RLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVW 477
+ +A VF +M+ G YS ++ ++G+SGR + +L +MK P+
Sbjct: 329 KSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAA 388
Query: 478 VYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEY 537
YN LI++ G +++ L+++M + PD +Y +I A K G E ++
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 538 RINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
N V ++ F + ++ + M G+ + S +F GL
Sbjct: 449 TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGL 507
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/402 (17%), Positives = 167/402 (41%), Gaps = 6/402 (1%)
Query: 192 AVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLD-DCESVVKL 250
+VF++ + + Y + + ++ + +++K+ + Y+ ++ A ++ D E ++ L
Sbjct: 175 SVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGL 234
Query: 251 FHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLIC 309
F E ++ Y L + G EA FR M GI + YS L+
Sbjct: 235 FAEMRHEGIQPDI----VTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 310 SFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKV 369
+F L ++ +V +LL E S + D Y L+ Y + +++ + V M+ A
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
Query: 370 CDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
++N F + + + + ++ S +P TY +I + + + +F
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
+M ++ + + Y +I G+ G +A K++ M P+ Y +I+ G+
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 490 KNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA 549
+ +N M P ++ S++ ++++ G + + + +G +R
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTF 530
Query: 550 GIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
+ + + G+ ++ VK DM+ D+R ++ + +
Sbjct: 531 NAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 136/327 (41%), Gaps = 14/327 (4%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
VF+++ S V Y+ ++ AY + E+ ++L ++ + S Y +
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSI----LTYNTVI 218
Query: 275 ESLGKCGRVSEA-LEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTK 332
+ + G E L F M +GI V Y+TL+ + A E E + R
Sbjct: 219 NACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGI 278
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA----DVKVCDCMLCAVVNGFSKRRGFS 388
+ D Y LV + + LEK +++ M D+ + +L A ++K
Sbjct: 279 VPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA----YAKSGSIK 334
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A+ + ++ + G P TY+ ++N + + +Y+ ++F EM+ D Y+ +I
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
++G G + + L M E +P++ Y +I G+ K+ M +
Sbjct: 395 EVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV 454
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFN 535
P +YT +I A+ +A +E FN
Sbjct: 455 PSSKAYTGVIEAFGQAALYEEALVAFN 481
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 177/436 (40%), Gaps = 41/436 (9%)
Query: 168 FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLD 227
C R +L+ K + V+ + + + + K + V VF K+ ++
Sbjct: 301 LCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRIN 360
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEAL 287
S I++ Y ++ + LF EF N+ + Y V ++LGK G+V EA+
Sbjct: 361 CVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDR----VCYNVAFDALGKLGKVEEAI 416
Query: 288 EYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMY 346
E FR MT KGI + Y+TLI K + +L+ E K D +Y L
Sbjct: 417 ELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGL 476
Query: 347 VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGF------------------------- 381
L ++ E ++ M++ VK V+ G
Sbjct: 477 ATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDA 536
Query: 382 SKRRGFSAAV---RAYEKLISQGYEPGQVTYASVINAYCRLSQY-NKAEKVFEEMEQKGF 437
S +GF AA A+E+ I + + Y ++ + C Y +KA+ + + M + G
Sbjct: 537 SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGV 596
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
+ Y +I + R +R A + + + P+++ Y +I+ + R +Q
Sbjct: 597 EPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYA 656
Query: 498 LWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFS 557
L+ +MKRR V PD V+Y+ ++ + + ++ E + D IM+ +
Sbjct: 657 LFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYC 709
Query: 558 KVGQIDQLVKLLQDMK 573
+ + ++ L +DMK
Sbjct: 710 HLNDLKKVYALFKDMK 725
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 139/616 (22%), Positives = 232/616 (37%), Gaps = 114/616 (18%)
Query: 84 NPGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTL----KHVIR---YLMR 136
NP LN F+ GL + T+ +A+ Q L+D + +KS L + V+R Y MR
Sbjct: 250 NPCVFYLN-FIEGLCLNQMTD-IAYFLLQPLRDANIL-VDKSDLGIAYRKVVRGLCYEMR 306
Query: 137 FKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLN-AFKSDSEVAVFA 195
+ + SV D + + + PD S +IE + A + N K +
Sbjct: 307 IEDAE---SVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVI 363
Query: 196 FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFE 255
S L+ Y ++ F +F++ + ++ LD Y+ +A KL E ++LF E
Sbjct: 364 VSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMT 423
Query: 256 SRNLR-DSKRY---LGQ---------------------------IYGVLCESLGKCGRVS 284
+ + D Y +G IY VL L G
Sbjct: 424 GKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQ 483
Query: 285 EALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLR-----EAKSR--------- 330
EA E ++M +G+ + V ++ L GE+++ E KSR
Sbjct: 484 EAFETLKMMENRGVKPTYVTHNMV--IEGLIDAGELDKAEAFYESLEHKSRENDASMVKG 541
Query: 331 --------------TKIKDP---EVYLKLVI-MYVEEDLLEKTLEVVEAMKDADVKVCDC 372
+++ P VY L + E+D + K ++++ M V+
Sbjct: 542 FCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKS 601
Query: 373 MLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
M ++ + + A +E L+++ P TY +IN YCRL++ +A +FE+M
Sbjct: 602 MYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDM 661
Query: 433 --------------------------EQKGFDKC--VVAYSSMIVMYGRSGRLRNAMKLV 464
E + FD VV Y+ MI Y L+ L
Sbjct: 662 KRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALF 721
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
MK R P+V Y L+ + E+NL + EMK V PD YT +I K
Sbjct: 722 KDMKRREIVPDVVTYTVLLK-NKPERNLSR------EMKAFDVKPDVFYYTVLIDWQCKI 774
Query: 525 GEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
G+ +F++ +G D A ++ K+G + + + M G + D Y
Sbjct: 775 GDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPY 834
Query: 585 QSAWNAFIEAGLQLQA 600
+ G L+A
Sbjct: 835 TALIAGCCRNGFVLKA 850
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 148/371 (39%), Gaps = 55/371 (14%)
Query: 156 LPDGATCSKLIEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVL 214
LP + C + A+ LL+ +K E +G + + +++ R+
Sbjct: 562 LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKARE 621
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
FE L + +V D Y+ ++ Y +L++ + LF + + R+++ Y VL
Sbjct: 622 FFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDV----VTYSVLL 677
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICS-FASLHKVGEVEELLREAKSRTKI 333
S L+ R M + VY T++ + + L+ + +V L ++ K R +
Sbjct: 678 NS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIV 730
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
D Y L+ E +L + MK DVK
Sbjct: 731 PDVVTYTVLLKNKPERNLSRE-------MKAFDVK------------------------- 758
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
P Y +I+ C++ +A+++F++M + G D Y+++I +
Sbjct: 759 ----------PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
G L+ A + +M E G KP+V Y +LI R + + KL EM + + P K S
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Query: 514 YTSMIGAYSKA 524
+++ A KA
Sbjct: 869 LSAVHYAKLKA 879
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%)
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
G +P Y+++I + + KA VF +M +K V SS++ Y + G
Sbjct: 320 HGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSE 379
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
A L + +E + YN D G+ + + +L+ EM + +APD ++YT++IG
Sbjct: 380 AYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIG 439
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
G+ +L E G D + ++ G + G + + L+ M+ G +
Sbjct: 440 GCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Query: 580 DQRLYQSAWNAFIEAGLQLQAKWLQESFH 608
+ I+AG +A+ ES
Sbjct: 500 TYVTHNMVIEGLIDAGELDKAEAFYESLE 528
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 145/325 (44%), Gaps = 30/325 (9%)
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESS---VYSTLICSFASLHKVGEVEELLREAKSRT 331
E++ KC EA + F ++ + +S+ +S +I HK L++ R
Sbjct: 46 EAILKCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERL 105
Query: 332 K------------------IKDPE----VYLKLVIMYVEEDLLEKTLEVVEAMK-DADVK 368
K I+ P+ V+ L++ ++E L E+ L V MK D K
Sbjct: 106 KRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSK 165
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
C +++NG +RR F + Y+ +IS+G P Y + + Y+K EK+
Sbjct: 166 AC----LSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR 488
+EM G V Y+ I+ R ++ A K+ MK+ G PN++ Y+++ID + +
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 489 EKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAM 548
N+RQ L+ E+ ++ P+ V + +++ + KA E T LF G + +
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 549 AGIMVGVFSKVGQIDQLVKLLQDMK 573
++ K G + + V LL +M+
Sbjct: 342 YNCLIHGHCKSGNMLEAVGLLSEME 366
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 183/429 (42%), Gaps = 12/429 (2%)
Query: 122 PEKSTLKHVIRYLMRFKKWDFILSVSEDFKIY---HVLPDGATCSKLIEFCIRQRKFKIA 178
P+ ++ L+R +++D SV D+++ ++PD L + C +Q +
Sbjct: 162 PDSKACLSILNGLVRRRRFD---SVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKK 218
Query: 179 ETLLNAFKS-DSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEA 237
E LL+ S + V+ + + + + + +FE +K + V+ + YS +++
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDG 278
Query: 238 YSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKG 297
Y K + L+ E L + ++G L + K + A F M K G
Sbjct: 279 YCKTGNVRQAYGLYKEILVAELLPNV----VVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 298 IFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTL 356
+ + VY+ LI + E LL E +S D Y L+ ED + +
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 357 EVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAY 416
+ + MK+ + ++++G+ K A+ ++ + G EP +T++++I+ Y
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 417 CRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNV 476
C + A ++ EM KG VV Y+++I + + ++ A++L + M E G PN
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND 514
Query: 477 WVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
+ L+D +E L + E +++ + V +T +I + G + F++
Sbjct: 515 HTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSD 574
Query: 537 YRINGGVID 545
R G D
Sbjct: 575 MRSCGITPD 583
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 143/341 (41%), Gaps = 2/341 (0%)
Query: 268 QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLRE 326
IY VL + K G S+ + MT GI + +Y+ I +K+ E E++
Sbjct: 200 HIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFEL 259
Query: 327 AKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
K + + Y ++ Y + + + + + + A++ + +V+GF K R
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARE 319
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
A + ++ G +P Y +I+ +C+ +A + EME V Y+
Sbjct: 320 LVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTI 379
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
+I ++ A +L KMK P+ YNSLI + +E N+ Q L +EM
Sbjct: 380 LINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASG 439
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
V P+ ++++++I Y + + L+ E I G V D ++ K + + +
Sbjct: 440 VEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEAL 499
Query: 567 KLLQDMKMEGTRLDQRLYQSAWNAFIEAG-LQLQAKWLQES 606
+L DM G + + + F + G L + + QE+
Sbjct: 500 RLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 133/293 (45%), Gaps = 5/293 (1%)
Query: 321 EELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNG 380
E+LL E S + +Y ++ ++ +E+ ++ E MK V A+++G
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDG 278
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+ K A Y++++ P V + ++++ +C+ + A +F M + G D
Sbjct: 279 YCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPN 338
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
+ Y+ +I + +SG + A+ L+++M+ P+V+ Y LI+ E + + +L+
Sbjct: 339 LYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQ 398
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
+MK ++ P +Y S+I Y K E +L +E +G + ++ + V
Sbjct: 399 KMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR 458
Query: 561 QIDQLVKLLQDMKMEGTRLDQRLYQSAWNA-FIEA----GLQLQAKWLQESFH 608
I + L +M ++G D Y + +A F EA L+L + L+ H
Sbjct: 459 DIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIH 511
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 166/404 (41%), Gaps = 26/404 (6%)
Query: 148 EDFKIYHVLPDGATCSKLIE-FC----IRQ-----RKFKIAETLLNAFKSDSEVAVFAFG 197
E K + VLP+ T S +I+ +C +RQ ++ +AE L N V FG
Sbjct: 258 ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN---------VVVFG 308
Query: 198 SALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESR 257
+ + + K +F + V + Y+ ++ + K + V L E ES
Sbjct: 309 TLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESL 368
Query: 258 NLR-DSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLH 315
NL D Y I G+ E +V+EA F+ M + IF SS Y++LI + +
Sbjct: 369 NLSPDVFTYTILINGLCIED-----QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 316 KVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
+ + +L E + + + L+ Y ++ + + M +
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
A+++ K A+R Y ++ G P T+A +++ + + + + A ++E Q+
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQ 543
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
V ++ +I ++G + A + + M+ G P++ Y S++ H +EK +
Sbjct: 544 RSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT 603
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI 539
L +M + + P+ + + Y G ++ L N R+
Sbjct: 604 MMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRL 647
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 111/215 (51%), Gaps = 6/215 (2%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++++GF K +AV Y ++ G P VT+ S+IN +C+ ++ + A ++ EM+
Sbjct: 595 SIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSM 654
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
+ AY ++I + + ++ A L +++ E G PNV VYNSLI +NL ++
Sbjct: 655 ELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF---RNLGKM 711
Query: 496 E---KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
+ L+ +M ++ D +YT+MI K G ++L++E G V D + ++
Sbjct: 712 DAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVL 771
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
V SK GQ + K+L++MK + + LY +
Sbjct: 772 VNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTV 806
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/453 (19%), Positives = 200/453 (44%), Gaps = 11/453 (2%)
Query: 105 ELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSED-FKIYHVLPDGATCS 163
E A ++Y R+K + P + +I+ ++ + + L + D F+ + + G C+
Sbjct: 397 EKAIEFYMRMKSVRI-APSSVLVHTMIQGCLKAESPEAALEIFNDSFESW--IAHGFMCN 453
Query: 164 KLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSN 222
K+ +Q K A + L + E V + + + + ++ +F ++
Sbjct: 454 KIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513
Query: 223 SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGR 282
+ ++ YS +++ + K D ++ + ++ + N ++ IY + L K G+
Sbjct: 514 GLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANE----VIYNTIINGLCKVGQ 569
Query: 283 VSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
S+A E + + K+ + S Y+++I F + E RE K + +
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
L+ + + + ++ LE+ MK ++K+ A+++GF K+ A + +L
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPEL 689
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G P Y S+I+ + L + + A ++++M G + Y++MI + G + A
Sbjct: 690 GLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLA 749
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
L +++ + G P+ ++ L++ ++ + K+ EMK++ V P+ + Y+++I
Sbjct: 750 SDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAG 809
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+ + G L +E G V D + ++V
Sbjct: 810 HHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 149/361 (41%), Gaps = 38/361 (10%)
Query: 226 LDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSE 285
L R +++++ AY + + V F R + Y+ + SL + + E
Sbjct: 167 LTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLS----SLVRSNLIDE 222
Query: 286 ALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
A E + M G+ +V + L+ + LRE K +K ++ +++
Sbjct: 223 AKEIYNKMVLIGVAGDNVTTQLLMRAS-----------LRERKPEEAVK---IFRRVMSR 268
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
E D L +L V A K D L ++ + RG KL G
Sbjct: 269 GAEPDGLLFSLAVQAACKTPD-------LVMALDLLREMRG---------KL---GVPAS 309
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
Q TY SVI A+ + +A +V +EM G V+A +S++ Y + L A+ L
Sbjct: 310 QETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFN 369
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
+M+E G P+ +++ +++ + + + + + MK ++AP V +MI KA
Sbjct: 370 RMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAE 429
Query: 526 EFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
E E+FN+ + M + +F K G++D L+ M+ +G + Y
Sbjct: 430 SPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 586 S 586
+
Sbjct: 489 N 489
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 130/279 (46%), Gaps = 8/279 (2%)
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC-AVVNGFSKRRG 386
K R + PE + ++++ Y L L+V+ M+ A V+ + ++C ++ F +
Sbjct: 234 KRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEP-NLLICNTTIDVFVRANR 292
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
A+R E++ G P VTY +I YC L + +A ++ E+M KG V+Y +
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 447 MIVMYGRSGRLRNAMKLVAKM-KERGCKPNVWVYNSLIDMHGREKNLRQLEKLW--NEMK 503
++ + R+ L+ KM KE G P+ YN+LI H K+ E LW + +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLI--HMLTKHDHADEALWFLKDAQ 410
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV-IDRAMAGIMVGVFSKVGQI 562
+ DK+ Y++++ A K G +L NE G D +V F ++G++
Sbjct: 411 EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEV 470
Query: 563 DQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
D+ KLLQ M G + + Y + N G L+A+
Sbjct: 471 DKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAR 509
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 164/385 (42%), Gaps = 11/385 (2%)
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
E+++ +V + Y+ ++ Y L E ++L + S+ K I G LC
Sbjct: 300 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLC- 358
Query: 276 SLGKCGRVSEALEYFRVMTKK-GIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
K R+ E + + M K+ G+ V Y+TLI E L++A+ +
Sbjct: 359 ---KEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFR 415
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCML-CAVVNGFSKRRGFSAAVR 392
D Y +V +E + + +++ M D + AVVNGF + A +
Sbjct: 416 IDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKK 475
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
+ + + G++P V+Y +++N CR + +A ++ E+ + + YS ++M+G
Sbjct: 476 LLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYS--VIMHG 533
Query: 453 --RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
R G+L A +V +M +G P N L+ R+ + K E + A +
Sbjct: 534 LRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
V++T++I + + E + + ++ + D +V K G+I + +L++
Sbjct: 594 VVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMK 653
Query: 571 DMKMEGTRLDQRLYQSAWNAFIEAG 595
M +G Y++ + + + G
Sbjct: 654 KMLHKGIDPTPVTYRTVIHRYCQMG 678
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 168/386 (43%), Gaps = 14/386 (3%)
Query: 220 KSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGK 279
K + +V D Y+ ++ +K D + + + + + R K LG Y + +L K
Sbjct: 375 KEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDK--LG--YSAIVHALCK 430
Query: 280 CGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDPE 337
GR+SEA + M KG V Y+ ++ F L +V + ++LL+ + +
Sbjct: 431 EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTV 490
Query: 338 VYLKLVIMYVEEDLLEKTLEVVEAMKDADV---KVCDCMLCAVVNGFSKRRGFSAAVRAY 394
Y L+ K+LE E M ++ +++G + S A
Sbjct: 491 SYTALLNGMCRTG---KSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVV 547
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+++ +G+ PG V ++ + CR + ++A K EE KG VV ++++I + ++
Sbjct: 548 REMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQN 607
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
L A+ ++ M +V+ Y +L+D G++ + + +L +M + + P V+Y
Sbjct: 608 DELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTY 667
Query: 515 TSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKM 574
++I Y + G+ + + + R + ++ +G++++ LL +
Sbjct: 668 RTVIHRYCQMGKVDDLVAILEKMISRQKC--RTIYNQVIEKLCVLGKLEEADTLLGKVLR 725
Query: 575 EGTRLDQRLYQSAWNAFIEAGLQLQA 600
+R D + + +++ G+ L A
Sbjct: 726 TASRSDAKTCYALMEGYLKKGVPLSA 751
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 121/277 (43%), Gaps = 2/277 (0%)
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
DP VY ++ + + L + + V+ MK + V+ +S+ A++
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+ G EP + + I+ + R ++ KA + E M+ G VV Y+ MI Y
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM-KRRKVAPDKVS 513
R+ A++L+ M +GC P+ Y +++ +EK + ++ L +M K + PD+V+
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
Y ++I +K + + + G ID+ +V K G++ + L+ +M
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 574 MEG-TRLDQRLYQSAWNAFIEAGLQLQAKWLQESFHV 609
+G D Y + N F G +AK L + H
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 171/424 (40%), Gaps = 12/424 (2%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVA-VFAFGSALRNYNKLHMFRRTV 213
V P+ C+ I+ +R + + A L + V V + +R Y LH +
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI-YGV 272
+ E + S + D Y IM K E + + + ++ Q+ Y
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCK----EKRIVEVRDLMKKMAKEHGLVPDQVTYNT 388
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRT 331
L L K EAL + + +KG + YS ++ + ++ E ++L+ E S+
Sbjct: 389 LIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG 448
Query: 332 KIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
P+V Y +V + ++K ++++ M K A++NG R G S
Sbjct: 449 HCP-PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC-RTGKSL 506
Query: 390 AVRAYEKLISQG-YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
R + + + P +TY+ +++ R + ++A V EM KGF V + ++
Sbjct: 507 EAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLL 566
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
R GR A K + + +GC NV + ++I + L + ++M
Sbjct: 567 QSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKH 626
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
D +YT+++ K G TEL + G ++ + ++G++D LV +
Sbjct: 627 ADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAI 686
Query: 569 LQDM 572
L+ M
Sbjct: 687 LEKM 690
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 1/203 (0%)
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
Y + Y S++ + + +V M+++G + A+S ++V Y R+G+LR+A+
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
K++ M+ G +PN+ + N+ ID+ R L + + M+ + P+ V+Y MI Y
Sbjct: 263 KVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGY 322
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME-GTRLD 580
E EL + G + D+ ++G K +I ++ L++ M E G D
Sbjct: 323 CDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPD 382
Query: 581 QRLYQSAWNAFIEAGLQLQAKWL 603
Q Y + + + +A W
Sbjct: 383 QVTYNTLIHMLTKHDHADEALWF 405
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 174/401 (43%), Gaps = 12/401 (2%)
Query: 200 LRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNL 259
LRN++++ V + +++ + S + ++E +L E +F E R +
Sbjct: 154 LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGV 213
Query: 260 -RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVG 318
DS Y + G + G++ EA + M ++G + TLI +L + G
Sbjct: 214 VPDSSSYKLMVIGCF-----RDGKIQEADRWLTGMIQRGFIPDNATCTLI--LTALCENG 266
Query: 319 EVEELLREAKSRTKIK-DPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
V + + + P + + L+ ++ +++ E++E M K
Sbjct: 267 LVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHT 326
Query: 376 AVVNGFSKRRGFSAAVRAYEKLI-SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQ 434
A+++G KR A R + KL+ S Y+P TY S+I YC+ + N+AE +F M++
Sbjct: 327 ALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKE 386
Query: 435 KGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQ 494
+G V Y+++I + ++G A +L+ M + G PN++ YN+ ID ++ +
Sbjct: 387 QGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPE 446
Query: 495 LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
+L N+ + D V+YT +I K + F G D + I++
Sbjct: 447 AYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIA 506
Query: 555 VFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
F + ++ + +L Q + G + Y S + + + G
Sbjct: 507 AFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 137/308 (44%), Gaps = 6/308 (1%)
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEE----LLREAK 328
L + L K G + +A E M + G ++ +VY T L K G E+ L+ +
Sbjct: 293 LIDGLCKKGSIKQAFEMLEEMVRNG-WKPNVY-THTALIDGLCKRGWTEKAFRLFLKLVR 350
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
S T + Y ++ Y +ED L + + MK+ + ++NG K F
Sbjct: 351 SDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFG 410
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A + +G+ P TY + I++ C+ S+ +A ++ + G + V Y+ +I
Sbjct: 411 RAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILI 470
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
+ + A+ +M + G + ++ + N LI R+K +++ E+L+ + +
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
P K +YTSMI Y K G+ + + F+ + +G V D G ++ K +D+ KL
Sbjct: 531 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKL 590
Query: 569 LQDMKMEG 576
+ M G
Sbjct: 591 YEAMIDRG 598
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/444 (18%), Positives = 166/444 (37%), Gaps = 50/444 (11%)
Query: 122 PEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETL 181
P T+ V+ + ++ +V ++ + V+PD ++ ++ C R K + A+
Sbjct: 180 PSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRW 239
Query: 182 LNA-----FKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIME 236
L F D+ + N + R + F K+ + ++ +++
Sbjct: 240 LTGMIQRGFIPDNATCTLILTALCEN----GLVNRAIWYFRKMIDLGFKPNLINFTSLID 295
Query: 237 AYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKK 296
K + ++ E +R+ + + L + L K G +A F + +
Sbjct: 296 GLCKKGSIKQAFEMLEEM----VRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRS 351
Query: 297 GIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
++ +V Y+++I + K+ E L K + + Y L+ + + +
Sbjct: 352 DTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGR 411
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVIN 414
E++ M D A ++ K+ A K S G E VTY +I
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFD--------------------------KCVVA----- 443
C+ + N+A F M + GF+ + VV+
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
Query: 444 ----YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW 499
Y+SMI Y + G + A+K MK GC P+ + Y SLI ++ + + KL+
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSK 523
M R ++P +V+ ++ Y K
Sbjct: 592 EAMIDRGLSPPEVTRVTLAYEYCK 615
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 107/269 (39%), Gaps = 47/269 (17%)
Query: 368 KVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEK 427
K + M C + N FS+ + AV + +QG P +T V+ L AE
Sbjct: 145 KAHEVMRCMLRN-FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAEN 203
Query: 428 VFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG-------C-------- 472
VF+EM +G +Y M++ R G+++ A + + M +RG C
Sbjct: 204 VFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALC 263
Query: 473 --------------------KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
KPN+ + SLID ++ +++Q ++ EM R P+
Sbjct: 264 ENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVY 323
Query: 513 SYTSMIGAYSKAGEFETCTELF------NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
++T++I K G E LF + Y+ N M+G + K ++++
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS-----MIGGYCKEDKLNRAE 378
Query: 567 KLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
L MK +G + Y + N +AG
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAG 407
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 267 GQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS--VYSTLICSFASLHKVGEVEELL 324
G Y +L + K +++AL +F M K G FE+ + + LI +F K+ E E L
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTG-FEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 325 REAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKR 384
+ S I E Y ++ Y +E ++ L+ MK ++++G K+
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 385 RGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
A + YE +I +G P +VT ++ YC+ + A + E +++K
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKK 632
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 176/386 (45%), Gaps = 19/386 (4%)
Query: 196 FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYS---HIMEAYSKLDDCESVVKLFH 252
F + + Y K +F ++ + V +D+ ++ H + L + ES++K
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK--- 364
Query: 253 EFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFA 312
+ E + + + Y +L G + ALEY+R + K G+F +V +
Sbjct: 365 KMEEKGISPDTK----TYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 313 SLHK-VGEVEELLREAKSRTKIKDPEVYLKLVI-MYVEEDLLEKTLEVVEAMKDADVKVC 370
K V EVE ++ E R I+ E + +++ MYV E L+ + + E + D +
Sbjct: 421 CQRKMVAEVEAVIAEM-DRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ-LDCVLS 478
Query: 371 DCMLCAVVNGFSKRRGF-SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
L AV++ ++++ + A Y K G + Y +I AY + + KA +F
Sbjct: 479 STTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 430 EEMEQKGF--DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHG 487
+ M+ +G D+C Y+S+ M + A +++A+M + GCKP Y ++I +
Sbjct: 539 KGMKNQGTWPDECT--YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYV 596
Query: 488 REKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRA 547
R L L+ M++ V P++V Y S+I ++++G E + F +G +
Sbjct: 597 RLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHI 656
Query: 548 MAGIMVGVFSKVGQIDQLVKLLQDMK 573
+ ++ +SKVG +++ ++ MK
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDKMK 682
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 137/300 (45%), Gaps = 6/300 (2%)
Query: 304 YSTLICSF--ASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEA 361
Y+ +I ++ A LH+ + L + K++ D Y L M DL+++ ++
Sbjct: 518 YNVMIKAYGKAKLHE--KALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
M D+ K A++ + + S AV YE + G +P +V Y S+IN +
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
+A + F ME+ G + +S+I Y + G L A ++ KMK+ P+V NS
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNS 695
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
++ + + + E ++N + R K D +S+ +M+ Y G + E+ E R +G
Sbjct: 696 MLSLCADLGIVSEAESIFNAL-REKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESG 754
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME-GTRLDQRLYQSAWNAFIEAGLQLQA 600
+ D ++ ++ GQ+ + +L +M +E LD +++ + + G+ +A
Sbjct: 755 LLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA 814
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 158/376 (42%), Gaps = 38/376 (10%)
Query: 263 KRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVE 321
K L + L + GK GR+++A F M K G+ ++ ++T+I + + + E E
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 322 ELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGF 381
LL++ + + D + Y L+ ++ + +E LE ++ + AV++
Sbjct: 361 SLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 382 SKRRGFSAAVRAY-------------------------EKLISQG---YEPGQV------ 407
+R+ A V A E L+ Q +E Q+
Sbjct: 421 CQRK-MVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSS 479
Query: 408 -TYASVINAYCRLSQYNKAEKVF-EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
T A+VI+ Y + +AE VF + G V+ Y+ MI YG++ A+ L
Sbjct: 480 TTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFK 539
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
MK +G P+ YNSL M + + +++ EM P +Y +MI +Y + G
Sbjct: 540 GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLG 599
Query: 526 EFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
+L+ G + + G ++ F++ G +++ ++ + M+ G + + +
Sbjct: 600 LLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Query: 586 SAWNAFIEAGLQLQAK 601
S A+ + G +A+
Sbjct: 660 SLIKAYSKVGCLEEAR 675
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 84/166 (50%)
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
++++I +YG++GRL +A L ++M + G + +N++I G +L + E L +M+
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
+ ++PD +Y ++ ++ AG+ E E + + R G D ++ + + +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 564 QLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESFHV 609
++ ++ +M R+D+ ++ GL +QAK L E F +
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL 473
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/406 (19%), Positives = 164/406 (40%), Gaps = 94/406 (23%)
Query: 202 NYNKL-HMFRRTVLVFEKLKSNSVVLDS------RGYSHIMEAYSKLDDCESVVKLFHEF 254
YN L M LV E + + +LDS + Y+ ++ +Y +L V L+
Sbjct: 552 TYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAM 611
Query: 255 ESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFAS 313
E ++ ++ +YG L + G V EA++YFR+M + G+ + V ++LI +++
Sbjct: 612 EKTGVKPNE----VVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS- 666
Query: 314 LHKVGEVEELLREAKSRTKIKD----PEV------------------------------- 338
KVG +EE R K+KD P+V
Sbjct: 667 --KVGCLEEARR---VYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT 721
Query: 339 -----YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDC------MLCAVVNG------- 380
+ ++ +Y +L++ +EV E M+++ + + DC M C +G
Sbjct: 722 CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGL-LSDCTSFNQVMACYAADGQLSECCE 780
Query: 381 -----FSKRRGFS--AAVRAYEKLISQGYEPGQV---------------TYASVINAYCR 418
+R+ + L+ +G P + T A +
Sbjct: 781 LFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSA 840
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
+ Y A + +E+ + AY+++I Y SG + A+K +M+E+G +P++
Sbjct: 841 MGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVT 900
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
L+ ++G+ + ++++ + + ++ P + + ++ AY A
Sbjct: 901 QAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSA 946
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 117/280 (41%), Gaps = 12/280 (4%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVF 216
PD A + ++ C AE++ NA + V +F + + Y + M + V
Sbjct: 688 PDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLG-QIYGVLCE 275
E+++ + ++ D ++ +M Y+ +LFHE L + K L + L
Sbjct: 748 EEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM----LVERKLLLDWGTFKTLFT 803
Query: 276 SLGKCGRVSEALEYFRVM--TKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
L K G SEA+ + K + ++ +TL F+++ E +E S
Sbjct: 804 LLKKGGVPSEAVSQLQTAYNEAKPLATPAITATL---FSAMGLYAYALESCQELTSGEIP 860
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAV-R 392
++ Y ++ Y ++ L+ M++ ++ D + A + G + G V R
Sbjct: 861 REHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEP-DIVTQAYLVGIYGKAGMVEGVKR 919
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
+ +L EP Q + +V +AY ++ + A+ V +EM
Sbjct: 920 VHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEM 959
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 163/391 (41%), Gaps = 11/391 (2%)
Query: 186 KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCE 245
KS ++ F L K++ F + + E++++ + D YS + + +
Sbjct: 76 KSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 246 SVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVY 304
+ + + L + C S R+S+A+ M + G ++ +
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHS----KRISDAVALVDQMVEMGYKPDTFTF 191
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD 364
+TLI +K E L+ + R D Y +V + ++ L ++ M+
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 365 ADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNK 424
A +K + +++ K R AV + ++ ++G P VTY S+IN C +++
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSD 311
Query: 425 AEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
A ++ M +K + VV ++++I + + G+L A KL +M +R P+ YN LI+
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 485 ---MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
MH R +Q+ K M + P+ +Y ++I + K E ELF E G
Sbjct: 372 GFCMHNRLDEAKQMFKF---MVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
V + ++ F + G D + + M
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQM 459
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/379 (18%), Positives = 168/379 (44%), Gaps = 41/379 (10%)
Query: 218 KLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR----------------- 260
++K+N V+ ++ I+++ K E V LF E E++ +R
Sbjct: 253 RIKANVVIFNT-----IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 261 ---DSKRYLGQI-----------YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YS 305
D+ R L + + L ++ K G++ EA + M ++ I ++ Y+
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 306 TLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA 365
LI F +++ E +++ + S+ + + + Y L+ + + +E +E+ M
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 366 DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKA 425
+ ++ GF + +A +++++S +TY+ +++ C + + A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 426 EKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDM 485
+F+ +++ + + Y++MI ++G++ A L + KP+V YN++I
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISG 544
Query: 486 HGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVID 545
++ L++ + L+ +MK P+ +Y ++I A + + EL E R +G V D
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGD 604
Query: 546 RAMAGIMVGVFSKVGQIDQ 564
+ ++ + G++D+
Sbjct: 605 ASTISLVTNMLHD-GRLDK 622
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/423 (18%), Positives = 168/423 (39%), Gaps = 8/423 (1%)
Query: 114 LKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIE-FCIRQ 172
+K RP P ++ + + K++ ++S+ E + + D T S I FC R
Sbjct: 75 VKSRPF--PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRS 132
Query: 173 RKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYS 232
+ L K E + S L Y V + +++ D+ ++
Sbjct: 133 QLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFT 192
Query: 233 HIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRV 292
++ + V L + R + G + LC K G + AL
Sbjct: 193 TLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC----KRGDIDLALNLLNK 248
Query: 293 MTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDL 351
M I + V ++T+I S V +L E +++ + Y L+
Sbjct: 249 MEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGR 308
Query: 352 LEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYAS 411
++ M + + A+++ F K A + +E++I + +P +TY
Sbjct: 309 WSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368
Query: 412 VINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG 471
+IN +C ++ ++A+++F+ M K + Y+++I + + R+ + ++L +M +RG
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428
Query: 472 CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
N Y ++I + + + ++ +M +V D ++Y+ ++ G+ +T
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488
Query: 532 ELF 534
+F
Sbjct: 489 VIF 491
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 2/190 (1%)
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
AV + ++ P V + +++A +++++ + E+M+ G + YS I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
+ R +L A+ ++AKM + G +P++ +SL++ + K + L ++M P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
D ++T++I + L ++ G D G +V K G ID + LL
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLL 246
Query: 570 QDMKMEGTRL 579
KME R+
Sbjct: 247 N--KMEAARI 254
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/481 (21%), Positives = 202/481 (41%), Gaps = 36/481 (7%)
Query: 135 MRFKKW-----DFILSVSEDFKIYHVLPDGATCSKLIEFC---IRQRKFKIAETLLNAFK 186
+R+ W D +S+ FK+ H L + SK+ F +R ++ +A
Sbjct: 85 LRYYSWLVKNSDISVSLELTFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAIS 144
Query: 187 SDSEVA---------VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEA 237
V V A+ + R F+R+ KL + S +M A
Sbjct: 145 MCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSC-------KPLMIA 197
Query: 238 YSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKG 297
K + V ++ E R ++ + + LC K G++++A + M G
Sbjct: 198 LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALC----KTGKMNKARDVMEDMKVYG 253
Query: 298 IFESSV-YSTLI---CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLE 353
+ V Y+TLI C K+ + + +L+E + + L+ + ++D L
Sbjct: 254 CSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLP 313
Query: 354 KTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVI 413
+++V + M D DVK +++NG S A+ +K++S G +P +TY ++I
Sbjct: 314 GSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALI 373
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
N +C+ +A +F ++ +G Y+ +I Y + G++ + L +M+ G
Sbjct: 374 NGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV 433
Query: 474 PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTEL 533
P+V YN LI R N+ +KL++++ + + PD V++ ++ Y + GE L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 534 FNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIE 593
E G I++ + K G + + M+ E RL R+ +++N ++
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKE-RRL--RMNVASYNVLLQ 549
Query: 594 A 594
Sbjct: 550 G 550
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 186/429 (43%), Gaps = 50/429 (11%)
Query: 93 FLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKI 152
+ L ++ ++ ++ + Y + ++ + +P T VI L + K + V ED K+
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRK--IQPNVFTFNVVINALCKTGKMNKARDVMEDMKV 251
Query: 153 YHVLPDGATCSKLIE-FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRR 211
Y P+ + + LI+ +C K+ +K+D+
Sbjct: 252 YGCSPNVVSYNTLIDGYCKLGGNGKM-------YKADA---------------------- 282
Query: 212 TVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYG 271
V +++ N V + ++ +++ + K D+ +K+F E ++++ + +
Sbjct: 283 ---VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSR 330
LC G++SEA+ M G+ + + Y+ LI F + E ++ K +
Sbjct: 340 GLCNG----GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNGFSKRRG 386
+ +Y L+ Y + ++ + E M+ DV +C++ G +
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA----GLCRNGN 451
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
AA + +++L S+G P VT+ ++ YCR + KA + +EM + G + Y+
Sbjct: 452 IEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 447 MIVMYGRSGRLRNAMKLVAKM-KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
++ Y + G L+ A + +M KER + NV YN L+ + ++ L L NEM +
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 506 KVAPDKVSY 514
+ P++++Y
Sbjct: 571 GLVPNRITY 579
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 49/265 (18%)
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY-- 451
Y+++I + +P T+ VINA C+ + NKA V E+M+ G VV+Y+++I Y
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 452 -GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
G +G++ A ++ +M E PN+ +N LID ++ NL K++ EM + V P+
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 511 KVSYTSMIGAYSKAGE-----------------------------------FETCTELFN 535
+SY S+I G+ + ++F
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 536 EYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS-----AWNA 590
+ G V M +++ + K+G+ID L ++M+ EG D Y N
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 591 FIEAGL----QLQAKWLQE--SFHV 609
IEA QL +K L + +FH+
Sbjct: 451 NIEAAKKLFDQLTSKGLPDLVTFHI 475
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 134/308 (43%), Gaps = 1/308 (0%)
Query: 288 EYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV 347
E R + +F +V +C ++K +V E ++ + +
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
+ K V++ M + DV +++GF K +++ +++++ Q +P +
Sbjct: 273 GNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
+Y S+IN C + ++A + ++M G ++ Y+++I + ++ L+ A+ + +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
K +G P +YN LID + + + L EM+R + PD +Y +I + G
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI 452
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
E +LF++ + G+ D I++ + + G+ + LL++M G + Y
Sbjct: 453 EAAKKLFDQL-TSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIV 511
Query: 588 WNAFIEAG 595
+ + G
Sbjct: 512 MKGYCKEG 519
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/490 (22%), Positives = 195/490 (39%), Gaps = 60/490 (12%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
F P+ T H++ L R + + D + + T + +I ++ K K A+
Sbjct: 186 FYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAK 245
Query: 180 TLLNAFKSDSEVAVFAFGSALRNYNKL---HMFRRTV----LVFEKLKSNSVVLDSRGYS 232
L + VF + YN L R + L+ ++KS D + Y+
Sbjct: 246 GFLGIME------VFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYN 299
Query: 233 HIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRV 292
I+ V++ E + DS Y +L G + A Y
Sbjct: 300 PILSWMCNEGRASEVLREMKEIGL--VPDSVSY-----NILIRGCSNNGDLEMAFAYRDE 352
Query: 293 MTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDL 351
M K+G+ + Y+TLI +K+ E L+RE + + + D Y L+
Sbjct: 353 MVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILI-------- 404
Query: 352 LEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYAS 411
NG+ + A ++++++ G +P Q TY S
Sbjct: 405 ---------------------------NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTS 437
Query: 412 VINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG 471
+I CR ++ +A+++FE++ KG +V ++++ + G + A L+ +M
Sbjct: 438 LIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMS 497
Query: 472 CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
P+ YN L+ E + +L EMKRR + PD +SY ++I YSK G+ +
Sbjct: 498 INPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAF 557
Query: 532 ELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
+ +E G ++ SK + + +LL++MK EG + S++ +
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN----DSSFCSV 613
Query: 592 IEAGLQLQAK 601
IEA L AK
Sbjct: 614 IEAMSNLDAK 623
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 113/260 (43%), Gaps = 4/260 (1%)
Query: 283 VSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKL 342
V EA+E F +M +KG + + I + S E + R +IK +
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 343 VI-MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
+I + +E L+K + M+ +K +V GFS R A ++ S+G
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
++P TY +++ C +A +V EM++ G V+Y+ +I +G L A
Sbjct: 291 FQPDMQTYNPILSWMC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
+M ++G P + YN+LI E + E L E++ + + D V+Y +I Y
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 522 SKAGEFETCTELFNEYRING 541
+ G+ + L +E +G
Sbjct: 408 CQHGDAKKAFALHDEMMTDG 427
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
S R F V A+++L ++ + + ++ C+L ++A + F M++KGF
Sbjct: 135 SIRNLFDELVLAHDRLETKS----TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKT 190
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
+ ++ + R R+ NA A M K NV+ +N +I++ +E L++ +
Sbjct: 191 ETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGI 250
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
M+ + P V+Y +++ +S G E + +E + G
Sbjct: 251 MEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 132/268 (49%), Gaps = 3/268 (1%)
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA--AVRAY 394
+VY ++ +Y K E+V+AM+ ++N K G + AV
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+ + + G P +TY ++++A R S + A KVFE+ME + Y++MI +YGR
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
G A +L +++ +G P+ YNSL+ RE+N ++++++ +M++ D+++Y
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 515 TSMIGAYSKAGEFETCTELFNEYR-INGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
++I Y K G+ + +L+ + + ++G D +++ K + + L+ +M
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 574 MEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
G + + Y + + +AG + +A+
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAE 493
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 154/329 (46%), Gaps = 18/329 (5%)
Query: 268 QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVE----E 322
Q+Y + + G+ S+A E M ++G + ++TLI A L G E
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLIN--ARLKSGGLTPNLAVE 283
Query: 323 LLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK----DADVKVCDCMLCAVV 378
LL ++ D Y L+ + L+ ++V E M+ D+ + M+ V
Sbjct: 284 LLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMIS--V 341
Query: 379 NGFSKRRGFSA-AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
G R G +A A R + +L +G+ P VTY S++ A+ R K ++V+++M++ GF
Sbjct: 342 YG---RCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGF 398
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE-RGCKPNVWVYNSLIDMHGREKNLRQLE 496
K + Y+++I MYG+ G+L A++L MK G P+ Y LID G+ +
Sbjct: 399 GKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAA 458
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
L +EM + P +Y+++I Y+KAG+ E + F+ +G D +M+ V
Sbjct: 459 ALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL 518
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
+ + + L +DM +G LY+
Sbjct: 519 LRGNETRKAWGLYRDMISDGHTPSYTLYE 547
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 146/349 (41%), Gaps = 44/349 (12%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFES--RNLRDSKRYLG-QIYGVLCESLGKCGRVSEAL 287
Y+ I+EAY K KL+ + ES NLR S R + + L + +CG A
Sbjct: 755 YTDIIEAYGK-------QKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERAR 807
Query: 288 EYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV 347
F M + G S ++ +L G +EEL YV
Sbjct: 808 AIFNTMMRDG--PSPTVESINILLHALCVDGRLEEL----------------------YV 843
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
VVE ++D K+ + +++ F++ + Y + + GY P
Sbjct: 844 ----------VVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIR 893
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
Y +I C+ + AE + EME+ F + ++SM+ MY + +++ ++
Sbjct: 894 LYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI 953
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
KE G +P+ YN+LI M+ R++ + L +M+ + P +Y S+I A+ K
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
E +LF E G +DR+ M+ + G + KLLQ MK G
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 161/376 (42%), Gaps = 42/376 (11%)
Query: 203 YNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDS 262
Y K ++++ V L+ + D + ++ +M AY++ E +F+ +RD
Sbjct: 762 YGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM----MRDG 817
Query: 263 KRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKG--IFESSVYSTLICSFASLHKVGEV 320
+ +L +L GR+ E + G I +SS+ ++ +FA + EV
Sbjct: 818 PSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSIL-LMLDAFARAGNIFEV 876
Query: 321 EELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNG 380
+++ K+ + +Y ++ + + + +V M++A+ KV + +++
Sbjct: 877 KKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM 936
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCR---------------------- 418
++ + V+ Y+++ G EP + TY ++I YCR
Sbjct: 937 YTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPK 996
Query: 419 -------LSQYNK------AEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
+S + K AE++FEE+ KG Y +M+ + SG A KL+
Sbjct: 997 LDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQ 1056
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
MK G +P + + L+ + N ++ EK+ + +K +V + Y+S+I AY ++
Sbjct: 1057 MMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSK 1116
Query: 526 EFETCTELFNEYRING 541
++ + E E + G
Sbjct: 1117 DYNSGIERLLEMKKEG 1132
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 105/220 (47%), Gaps = 5/220 (2%)
Query: 375 CAVVNGFSKRRGFSAAVRAYEKL-ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
C VV + + A+ +E L + + P A+++ R +Q + A ++F E
Sbjct: 160 CFVVKSVGQE-SWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAE 218
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
D+ V Y++M+ +Y RSG+ A +LV M++RGC P++ +N+LI+ + L
Sbjct: 219 PTVGDR-VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLT 277
Query: 494 Q--LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI 551
+L + ++ + PD ++Y +++ A S+ + ++F + + D
Sbjct: 278 PNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNA 337
Query: 552 MVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
M+ V+ + G + +L +++++G D Y S AF
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAF 377
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 170/417 (40%), Gaps = 57/417 (13%)
Query: 221 SNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVL-CESLGK 279
+N L++ I+ +YS +L EF + SKR + + VL C K
Sbjct: 602 TNGYELENDTLLSILGSYSSSGRHSEAFELL-EFLKEHASGSKRLITEALIVLHC----K 656
Query: 280 CGRVSEAL-EYFRVMTKKG--IFESSVYSTLI-CSFASLHKVGEVEELLREAKSRTKIKD 335
+S AL EYF G S++Y TL+ C A+ H E ++ + +
Sbjct: 657 VNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEH-YAEASQVFSDLRLSGCEAS 715
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK-VCDCMLCAVVNGFSKRRGFSAAVRAY 394
V +V++Y + E +VV + C M ++ + K++ + A
Sbjct: 716 ESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVV 775
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF------------------------- 429
L G P T+ S+++AY + Y +A +F
Sbjct: 776 GNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVD 835
Query: 430 ----------EEMEQKGFDKCVVAYSSMIVM---YGRSGRLRNAMKLVAKMKERGCKPNV 476
EE++ GF ++ SS+++M + R+G + K+ + MK G P +
Sbjct: 836 GRLEELYVVVEELQDMGFK---ISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTI 892
Query: 477 WVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
+Y +I++ + K +R E + +EM+ + + SM+ Y+ +++ +++
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQR 952
Query: 537 YRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRL--YQSAWNAF 591
+ G D ++ ++ + + ++ L+Q M+ G LD +L Y+S +AF
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLG--LDPKLDTYKSLISAF 1007
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y ++++ Y +A +VF ++ G + SM+V+Y + G A ++V + +
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 469 ERG----CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
+G C P +Y +I+ +G++K ++ E + +++ PD ++ S++ AY++
Sbjct: 744 TKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQC 800
Query: 525 GEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
G +E +FN +G I++ G++++L ++++++ G ++ +
Sbjct: 801 GCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSI 860
Query: 585 QSAWNAFIEAG 595
+AF AG
Sbjct: 861 LLMLDAFARAG 871
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/357 (19%), Positives = 155/357 (43%), Gaps = 8/357 (2%)
Query: 84 NPGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFI 143
+P E++N L L D + EEL + + L+D F+ KS++ ++ R +
Sbjct: 819 SPTVESINILLHALCVDGRLEEL-YVVVEELQDMG-FKISKSSILLMLDAFARAGNIFEV 876
Query: 144 LSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFK-SDSEVAVFAFGSALRN 202
+ K LP +IE + ++ + AE +++ + ++ +V + + S L+
Sbjct: 877 KKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM 936
Query: 203 YNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDS 262
Y + +++TV V++++K + D Y+ ++ Y + E L + RNL
Sbjct: 937 YTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM--RNLGLD 994
Query: 263 KRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVE 321
+ Y L + GK + +A + F + KG+ + S Y T++ + E
Sbjct: 995 PKL--DTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAE 1052
Query: 322 ELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGF 381
+LL+ K+ L++ Y ++ +V+ +KD +V++ +V++ +
Sbjct: 1053 KLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAY 1112
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFD 438
+ + +++ + ++ +G EP + + A + + + + +E GFD
Sbjct: 1113 LRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKALEDIGFD 1169
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/523 (19%), Positives = 202/523 (38%), Gaps = 61/523 (11%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
RP+ T ++ R D + V ED + + PD T + +I R AE
Sbjct: 293 LRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAE 352
Query: 180 TL-----LNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHI 234
L L F D+ + S L + + + V+++++ D Y+ I
Sbjct: 353 RLFMELELKGFFPDA----VTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTI 408
Query: 235 MEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMT 294
+ Y K + ++L+ + + + R+ Y VL +SLGK R EA M
Sbjct: 409 IHMYGKQGQLDLALQLYKDMKGLSGRNPD---AITYTVLIDSLGKANRTVEAAALMSEML 465
Query: 295 KKGIFES-SVYSTLICSFASLHKVGEVEE-----------------------LLREAKSR 330
GI + YS LIC +A K E E+ LLR ++R
Sbjct: 466 DVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETR 525
Query: 331 TK-------IKDPE-----VYLKLVIMYVEE---DLLEKTLEVVEAMKDADVKVCDCMLC 375
I D +Y +++ ++E D ++KT+ +E ++C
Sbjct: 526 KAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDME-------ELCGMNPL 578
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+ + K F A R + I+ GYE T S++ +Y ++++A ++ E +++
Sbjct: 579 EISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEH 638
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMK--LVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+ ++IV++ + L A+ C + +Y +L+ ++
Sbjct: 639 ASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYA 698
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING-GVIDRAMAGIM 552
+ +++++++ + SM+ Y K G ET ++ N+ G M +
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDI 758
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ + K + ++ +++ G D + + S +A+ + G
Sbjct: 759 IEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG 801
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 116/240 (48%)
Query: 356 LEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINA 415
L+++ M++ +VK +++ + AA+ ++++ ++G + VTY S++
Sbjct: 213 LDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 416 YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN 475
C+ ++N + ++M + V+ ++ ++ ++ + G+L+ A +L +M RG PN
Sbjct: 273 LCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPN 332
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
+ YN+L+D + + L + + + M R K +PD V++TS+I Y + ++F
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 536 EYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
G V + I+V F + G+I +L Q+M G D Y + + G
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNG 452
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/510 (18%), Positives = 209/510 (40%), Gaps = 44/510 (8%)
Query: 96 GLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHV 155
G+ K + +A + + ++ RP+ P + R K+++ +L + ++ +
Sbjct: 63 GIVDIKKDDAIAL-FQEMIRSRPL--PSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGI 119
Query: 156 LPDGATCSKLIEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVL 214
+ T + +I R K A ++L K E F + ++ V+
Sbjct: 120 AHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVV 179
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
+ +++ N D Y+ I+ + D + L + E RN++ Y +
Sbjct: 180 LVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVF----TYSTII 235
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKI 333
+SL + G + A+ F+ M KGI S V Y++L+ K + LL++ SR +
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+ + L+ ++V+E L++ E+
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANEL----------------------------------- 320
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
Y+++I++G P +TY ++++ YC ++ ++A + + M + +V ++S+I Y
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
R+ + MK+ + +RG N Y+ L+ + ++ E+L+ EM V PD ++
Sbjct: 381 VKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMT 440
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
Y ++ G+ E E+F + + + + M ++ K G+++ L +
Sbjct: 441 YGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLP 500
Query: 574 MEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+G + + Y + + G +A L
Sbjct: 501 CKGVKPNVMTYTVMISGLCKKGSLSEANIL 530
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 156/360 (43%), Gaps = 34/360 (9%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDC-ESVVKLFHEFESRNLRDSKRYLGQI---- 269
+ K++ +V D YS I+++ + D C ++ + LF E E++ ++ S +
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCR-DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 270 ---------------------------YGVLCESLGKCGRVSEALEYFRVMTKKGIFESS 302
+ VL + K G++ EA E ++ M +GI +
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 303 V-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEA 361
+ Y+TL+ + +++ E +L D + L+ Y ++ ++V
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
+ + +V GF + A +++++S G P +TY +++ C +
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
KA ++FE++++ D +V Y+++I + G++ +A L + +G KPNV Y
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
+I ++ +L + L +M+ AP+ +Y ++I A+ + G+ +L E + G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 178/437 (40%), Gaps = 41/437 (9%)
Query: 85 PGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPV---FRPEKSTLKHVIRYLMRFKKWD 141
P T N + GLF + K E L DR V +P+ T ++ + R
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVV-----LVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 142 FILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSAL 200
L + + +V D T S +I+ R A +L ++ + +V + S +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 201 RNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRN-- 258
R K + L+ + + S +V + ++ +++ + K + +L+ E +R
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 259 ------------------LRDSKRYLGQIYGVLCE-------SL--GKC--GRVSEALEY 289
L ++ L + C SL G C RV + ++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 290 FRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
FR ++K+G+ ++V YS L+ F K+ EEL +E S + D Y L+ +
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
LEK LE+ E ++ + + + M ++ G K A + L +G +P +T
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y +I+ C+ ++A + +ME+ G Y+++I + R G L + KL+ +MK
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Query: 469 ERGCKPNVWVYNSLIDM 485
G + +IDM
Sbjct: 571 SCGFSADASSIKMVIDM 587
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/470 (22%), Positives = 204/470 (43%), Gaps = 26/470 (5%)
Query: 142 FILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALR 201
IL+ + FK H L D +L+ + R +L+ D E F +
Sbjct: 88 LILTKHKHFKTAHQLLDKLAQRELLSSPLVLR------SLVGGVSEDPEDVSHVFSWLMI 141
Query: 202 NYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRD 261
Y K M +++VFE+++S + + + ++ + K ++V K+F + +
Sbjct: 142 YYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVA 201
Query: 262 SKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLICSFA--SLHKVG 318
+ +Y VL + K G +A + M +KG+F + Y+TLI + S+H
Sbjct: 202 NI----HVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH--- 254
Query: 319 EVEELLREAKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCA 376
E L + + P + Y + + E + + + +KD DV
Sbjct: 255 -FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTT 312
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+++G+ + A+R E + S+G+ PG VTY S++ C + +A ++ EM K
Sbjct: 313 LIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKK 372
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ + +++I Y + + +A+K+ KM E G K +++ Y +LI HG K L +LE
Sbjct: 373 IEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALI--HGFCKVL-ELE 429
Query: 497 KLWNE---MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
E M + +P +Y+ ++ + + + T+L E+ G D A+ ++
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
K+ Q+D L + M+ +G D ++ + A+ G +A L
Sbjct: 490 RRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASAL 539
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/427 (20%), Positives = 179/427 (41%), Gaps = 27/427 (6%)
Query: 122 PEKSTLKHVIRYLM-RFKKWDFI---LSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKI 177
PE + HV +LM + K I + V E + + P C+ L+ ++QR +
Sbjct: 129 PED--VSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQR---L 183
Query: 178 AETLLNAFKSDSEVAVFA----FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSH 233
+T+ FK ++ V A + + +K + + +++ V D Y+
Sbjct: 184 TDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNT 243
Query: 234 IMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQ-----IYGVLCESLGKCGRVSEALE 288
++ Y K K H FE+ +++D G Y + GR+ EA
Sbjct: 244 LISVYCK--------KSMH-FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATR 294
Query: 289 YFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
FR + Y+TLI + ++ + E L +SR Y ++ E
Sbjct: 295 LFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCE 354
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
+ + + ++ M ++ + ++N + K +AV+ +K+I G + +
Sbjct: 355 DGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYS 414
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y ++I+ +C++ + A++ M +KGF YS ++ + + KL+ + +
Sbjct: 415 YKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFE 474
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
+RG +V +Y LI + + + + L+ M+++ + D V +T+M AY + G+
Sbjct: 475 KRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVT 534
Query: 529 TCTELFN 535
+ LF+
Sbjct: 535 EASALFD 541
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 156/381 (40%), Gaps = 41/381 (10%)
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEAL 287
S +S +M Y+K + +F + S L K +L Q VL SL K
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGL---KPHL-QACTVLLNSLVKQRLTDTVW 188
Query: 288 EYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMY 346
+ F+ M K G+ + VY+ L+ + + + E+LL E + + D Y L+ +Y
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 347 VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQ 406
++ + + L V + M+ + G P
Sbjct: 249 CKKSMHFEALSVQDRMERS-----------------------------------GVAPNI 273
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
VTY S I+ + R + +A ++F E++ V Y+++I Y R + A++L
Sbjct: 274 VTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREV 332
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
M+ RG P V YNS++ + +R+ +L EM +K+ PD ++ ++I AY K +
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 527 FETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
+ ++ + +G +D ++ F KV +++ + L M +G Y
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 587 AWNAFIEAGLQLQAKWLQESF 607
+ F Q + L E F
Sbjct: 453 LVDGFYNQNKQDEITKLLEEF 473
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/381 (18%), Positives = 161/381 (42%), Gaps = 16/381 (4%)
Query: 144 LSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVA-VFAFGSALRN 202
L V + +Y+VL + C + + AE LL+ + +F + + +
Sbjct: 197 LGVVANIHVYNVL---------VHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISV 247
Query: 203 YNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDS 262
Y K M + V ++++ + V + Y+ + +S+ +LF R ++D
Sbjct: 248 YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLF-----REIKDD 302
Query: 263 KRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVE 321
Y L + + + EAL VM +G V Y++++ ++ E
Sbjct: 303 VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREAN 362
Query: 322 ELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGF 381
LL E + D L+ Y + + + ++V + M ++ +K+ A+++GF
Sbjct: 363 RLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGF 422
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
K A +I +G+ PG TY+ +++ + ++ ++ K+ EE E++G V
Sbjct: 423 CKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADV 482
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
Y +I + ++ A L M+++G + ++ ++ + R + + L++
Sbjct: 483 ALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDV 542
Query: 502 MKRRKVAPDKVSYTSMIGAYS 522
M R++ + Y S+ +Y+
Sbjct: 543 MYNRRLMVNLKLYKSISASYA 563
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/438 (18%), Positives = 186/438 (42%), Gaps = 9/438 (2%)
Query: 107 AFDYYQRL-KDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKL 165
A D + R+ RP+ P ++ + + ++D ++S+ E +I + P TC+ +
Sbjct: 67 ALDLFTRMVHSRPL--PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 166 IE-FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSV 224
+ C+ + + + L K E + F S L Y + + +F+++
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVS 284
+ Y+ ++ K V+LF++ + R + Y L L + GR
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV----VTYNALVTGLCEIGRWG 240
Query: 285 EALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
+A R M K+ I + + ++ LI +F + K+ E +EL + D Y L+
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
LL++ ++ M+ + + +++GF K + ++ + ++ +G
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
+TY +I YC + + + A++VF +M + + Y+ ++ +G++ A+ +
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMI 420
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
M++R N+ Y +I + + L+ + + + P+ ++YT+MI + +
Sbjct: 421 FEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 524 AGEFETCTELFNEYRING 541
G LF + + +G
Sbjct: 481 RGLIHEADSLFKKMKEDG 498
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 103/220 (46%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+++NG+ A+ +++++ G++P VTY ++I C+ N A ++F +M
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G VV Y++++ GR +A L+ M +R +PNV + +LID + L +
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
++L+N M + V PD +Y S+I G + ++F NG + + ++
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
F K +++ +K+ +M +G + Y + G
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVG 377
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 100/213 (46%), Gaps = 6/213 (2%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++ K R + AV + ++ + G P VTY +++ C + ++ A + +M ++
Sbjct: 193 TLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKR 252
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID---MHGREKNL 492
+ V+ ++++I + + G+L A +L M + P+V+ Y SLI+ M+G
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
RQ+ L M+R P++V YT++I + K+ E ++F E G V + ++
Sbjct: 313 RQMFYL---MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
+ + VG+ D ++ M D R Y
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/337 (19%), Positives = 142/337 (42%), Gaps = 9/337 (2%)
Query: 204 NKLH--MFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRD 261
N LH F + +F ++ + + ++ ++ +K++ + V+ LF + + +
Sbjct: 57 NGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPP 116
Query: 262 SKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGE 319
+ +C S C A + M K G FE + +++L+ + +++ +
Sbjct: 117 LLCTCNIVMHCVCLSSQPC----RASCFLGKMMKLG-FEPDLVTFTSLLNGYCHWNRIED 171
Query: 320 VEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVN 379
L + + Y L+ + L +E+ M + A+V
Sbjct: 172 AIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVT 231
Query: 380 GFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDK 439
G + + A ++ + EP +T+ ++I+A+ ++ + +A++++ M Q
Sbjct: 232 GLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYP 291
Query: 440 CVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW 499
V Y S+I G L A ++ M+ GC PN +Y +LI + K + K++
Sbjct: 292 DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
EM ++ V + ++YT +I Y G + E+FN+
Sbjct: 352 YEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 104/242 (42%), Gaps = 10/242 (4%)
Query: 372 CMLCAVVNGFSKRRG----------FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
C C + FS R F+ A+ + +++ P + + +++ ++++
Sbjct: 39 CGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNR 98
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
Y+ +FE+M+ G + + ++ S + A + KM + G +P++ + S
Sbjct: 99 YDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTS 158
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
L++ + + L++++ P+ V+YT++I K ELFN+ NG
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
+ +V ++G+ LL+DM + + + +AF++ G ++AK
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 602 WL 603
L
Sbjct: 279 EL 280
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 122/245 (49%), Gaps = 2/245 (0%)
Query: 351 LLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYA 410
L+ LEV++ MKD + +++ G K + A R ++ S+ P +T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 411 SVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER 470
++I+AY + + +K + V++ M Q D V YSS+I R+ A+K++ M +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 471 GCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETC 530
GC PNV Y++L + + + KL ++M +R VA + VS ++I Y +AG+ +
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 531 TELFNEYRINGGVID-RAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWN 589
+F NG + + R+ ++ G+F+ G++++ + + M+ LD Y +
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFAN-GEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Query: 590 AFIEA 594
+A
Sbjct: 302 GMCKA 306
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 107/202 (52%), Gaps = 6/202 (2%)
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
K++ G EP VT +S++N +C + A V +ME+ G + VV + +I ++
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
+ A++++ +MK+RG PNV Y+SLI + L E+ +EM +K+ P+ ++++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 516 SMIGAYSKAGEF---ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
++I AY+K G+ ++ ++ + I+ V + ++ G+ ++D+ +K+L M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF--TYSSLIYGLCMH-NRVDEAIKMLDLM 179
Query: 573 KMEGTRLDQRLYQSAWNAFIEA 594
+G + Y + N F ++
Sbjct: 180 ISKGCTPNVVTYSTLANGFFKS 201
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 134/338 (39%), Gaps = 36/338 (10%)
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSR 330
+L ++L K V ALE + M +GI + V YS+LI ++ + E L E S+
Sbjct: 53 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA 390
KI +P V A+++ ++KR S
Sbjct: 113 -KI-NPNV---------------------------------ITFSALIDAYAKRGKLSKV 137
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
Y+ +I +P TY+S+I C ++ ++A K+ + M KG VV YS++
Sbjct: 138 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 197
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ +S R+ + +KL+ M +RG N N+LI + + + ++ M + P+
Sbjct: 198 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPN 257
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
SY ++ GE E F + +D IM+ K + + L
Sbjct: 258 IRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFY 317
Query: 571 DMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESFH 608
+K + D + Y AG++ +A L +
Sbjct: 318 KLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQ 355
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 143/335 (42%), Gaps = 7/335 (2%)
Query: 240 KLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI 298
+++D E + LFH+++ R D Y IY L K + R++ + +
Sbjct: 58 EIEDPEEALSLFHQYQEMGFRHDYPSYSSLIY-----KLAKSRNFDAVDQILRLVRYRNV 112
Query: 299 -FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE 357
S++ LI + V + ++ + S ++ + L+ + V+ LEK
Sbjct: 113 RCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKS 172
Query: 358 VVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC 417
+ KD ++ ++ GF + + AA + +++++ +P VTY S+I C
Sbjct: 173 FFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLC 232
Query: 418 RLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVW 477
R KA+ + E+M +K V + ++ G A KL+ M+ RGCKP +
Sbjct: 233 RNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLV 292
Query: 478 VYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEY 537
Y L+ G+ + + + L EMK+R++ PD V Y ++ + E
Sbjct: 293 NYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEM 352
Query: 538 RINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
++ G + A +M+ F ++ D + +L M
Sbjct: 353 QMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM 387
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 136/326 (41%), Gaps = 4/326 (1%)
Query: 195 AFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEF 254
+F A+ +LH+ + +++S + + ++ + E Y+ + VKLF
Sbjct: 93 SFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNM 152
Query: 255 ESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASL 314
I VLC+S RV +A E FR + + ++ Y+ ++ + +
Sbjct: 153 HEHGCFQDLASFNTILDVLCKS----KRVEKAYELFRALRGRFSVDTVTYNVILNGWCLI 208
Query: 315 HKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCML 374
+ + E+L+E R + Y ++ + + E MK D ++
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 375 CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQ 434
VV+GF A ++++I +G P TY ++I C+ A +FEEM +
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 435 KGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQ 494
+G++ V Y+ +I +G +L+ +M+ GC+PN YN +I + + +
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 495 LEKLWNEMKRRKVAPDKVSYTSMIGA 520
L+ +M P+ +Y +I
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILISG 414
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 147/349 (42%), Gaps = 41/349 (11%)
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVS 284
V D+ + ++ ++L +V L H S + S + + ++ E G+
Sbjct: 88 VHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPK----TFAIVAERYASAGKPD 143
Query: 285 EALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
+A++ F M + G F+ + ++T++ +V + EL R + R + D Y
Sbjct: 144 KAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV-DTVTY---- 198
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
++NG+ + A+ ++++ +G
Sbjct: 199 -------------------------------NVILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P TY +++ + R Q A + F EM+++ + VV Y++++ +G +G ++ A +
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNV 287
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+M G P+V YN++I + ++ N+ ++ EM RR P+ +Y +I
Sbjct: 288 FDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFH 347
Query: 524 AGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
AGEF EL G + +M+ +S+ ++++ + L + M
Sbjct: 348 AGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/304 (20%), Positives = 136/304 (44%), Gaps = 4/304 (1%)
Query: 285 EALEYFRVMT---KKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
+AL++F + ++ + ++S + I A LH V L+ +S P+ +
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
+ Y +K +++ M + +++ K + A + L +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR- 190
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
+ VTY ++N +C + + KA +V +EM ++G + + Y++M+ + R+G++R+A
Sbjct: 191 FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
+ +MK+R C+ +V Y +++ G +++ +++EM R V P +Y +MI
Sbjct: 251 EFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVL 310
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
K E +F E G + +++ G+ + +L+Q M+ EG +
Sbjct: 311 CKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNF 370
Query: 582 RLYQ 585
+ Y
Sbjct: 371 QTYN 374
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 94/206 (45%), Gaps = 1/206 (0%)
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
AV+ + + G ++ ++++ C+ + KA ++F + + F V Y+ ++
Sbjct: 145 AVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILN 203
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
+ R A++++ +M ERG PN+ YN+++ R +R + + EMK+R
Sbjct: 204 GWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI 263
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
D V+YT+++ + AGE + +F+E G + A M+ V K ++ V +
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMF 323
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAG 595
++M G + Y AG
Sbjct: 324 EEMVRRGYEPNVTTYNVLIRGLFHAG 349
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 155/309 (50%), Gaps = 9/309 (2%)
Query: 271 GVLCESLGKCGRVSE-ALEYFRVMTKKGIFESS--VYSTLICSFASLHKVGEVEELLREA 327
G++ L +CG +F K+ + S VY +++ + + + G V L+ E
Sbjct: 114 GLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEM 173
Query: 328 -KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
K ++ +PE+++ LV + D+++K +EV++ M + + + +++ K
Sbjct: 174 RKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGS 233
Query: 387 FSAAVRAYEKLISQGYEPGQVTY-ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
A + +E + + P + Y S++ +CR+ + +A+ V +M + GF+ +V Y+
Sbjct: 234 VKDAAKLFEDMRMRF--PVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYT 291
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
+++ Y +G++ +A L+ M+ RG +PN Y LI + + + K++ EM+R
Sbjct: 292 NLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERY 351
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV-FSKVGQIDQ 564
+ D V+YT+++ + K G+ + C + ++ I G++ + + + V K ++
Sbjct: 352 ECEADVVTYTALVSGFCKWGKIDKCYIVLDDM-IKKGLMPSELTYMHIMVAHEKKESFEE 410
Query: 565 LVKLLQDMK 573
++L++ M+
Sbjct: 411 CLELMEKMR 419
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/348 (18%), Positives = 147/348 (42%), Gaps = 43/348 (12%)
Query: 196 FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFE 255
F ++ + M ++ + V +++ D + +++A K + KLF +
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 256 SRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFAS 313
R + + + +YG C + G++ EA +Y V + FE + Y+ L+ +A+
Sbjct: 246 MRFPVNLRYFTSLLYG-WC----RVGKMMEA-KYVLVQMNEAGFEPDIVDYTNLLSGYAN 299
Query: 314 LHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCM 373
K+ + +LLR+ + R + Y L+ + D +E+ ++V M+ +
Sbjct: 300 AGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYEC------ 353
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
E VTY ++++ +C+ + +K V ++M
Sbjct: 354 -----------------------------EADVVTYTALVSGFCKWGKIDKCYIVLDDMI 384
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+KG + Y ++V + + ++L+ KM++ P++ +YN +I + + ++
Sbjct: 385 KKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVK 444
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
+ +LWNEM+ ++P ++ MI + G ++ F E G
Sbjct: 445 EAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRG 492
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 140/321 (43%), Gaps = 16/321 (4%)
Query: 231 YSHIMEAY-------SKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRV 283
Y H +E Y SK+ +V L E N + +++ VL + V
Sbjct: 143 YCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKEN---PQLIEPELFVVLVQRFASADMV 199
Query: 284 SEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEE---LLREAKSRTKIKDPEVYL 340
+A+E M K G FE Y C +L K G V++ L + + R + + +
Sbjct: 200 KKAIEVLDEMPKFG-FEPDEY-VFGCLLDALCKHGSVKDAAKLFEDMRMRFPV-NLRYFT 256
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
L+ + + + V+ M +A + +++G++ + A + +
Sbjct: 257 SLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRR 316
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G+EP Y +I A C++ + +A KVF EME+ + VV Y++++ + + G++
Sbjct: 317 GFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC 376
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
++ M ++G P+ Y ++ H ++++ + +L +M++ + PD Y +I
Sbjct: 377 YIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRL 436
Query: 521 YSKAGEFETCTELFNEYRING 541
K GE + L+NE NG
Sbjct: 437 ACKLGEVKEAVRLWNEMEENG 457
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 8/210 (3%)
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNGFSKRRGFSAAV 391
P V+ L + + MKD V+ C+ + +++ + A+
Sbjct: 168 PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG----QGRVDIAL 223
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
R Y ++ P T V++ YCR + +K ++ ++ME+ GF V+Y+++I +
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
G L +A+KL M + G +PNV +N+LI R L++ K++ EMK VAP+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRING 541
V+Y ++I YS+ G+ E + + NG
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 172/384 (44%), Gaps = 20/384 (5%)
Query: 219 LKSNSVVLDSRGYSHIMEAYSKLDDCESVV-KLFHEFES-RNLRDSKRYLGQI--YGVL- 273
L + V L ++ + ++ +Y + D V LF F + R++ Q+ YG L
Sbjct: 142 LVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLP 201
Query: 274 --------CESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICS-FASLHKVGEVEELL 324
SL GRV AL ++R M + I + ++ S + K+ + ELL
Sbjct: 202 TVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELL 261
Query: 325 REAKSRTKIKDPEV-YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
++ + R + +V Y L+ + E+ LL L++ M + ++ +++GF +
Sbjct: 262 QDME-RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
A + + ++ + P VTY ++IN Y + + A + +E+M G + ++
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
Y+++I + + R A + V ++ + PN +++LI KN + +L+ M
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
R P++ ++ ++ A+ + +F+ +++ E +D + G+ D
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK-D 499
Query: 564 QLV-KLLQDMKMEGTRLDQRLYQS 586
QLV KLLQ+ MEG + Q + +
Sbjct: 500 QLVKKLLQE--MEGKKFLQESFNN 521
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 101/210 (48%), Gaps = 8/210 (3%)
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNGFSKRRGFSAAV 391
P V+ L + + MKD V+ C+ + +++ + A+
Sbjct: 168 PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG----QGRVDIAL 223
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
R Y ++ P T V++ YCR + +K ++ ++ME+ GF V+Y+++I +
Sbjct: 224 RFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGH 283
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
G L +A+KL M + G +PNV +N+LI R L++ K++ EMK VAP+
Sbjct: 284 CEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNT 343
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRING 541
V+Y ++I YS+ G+ E + + NG
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 172/384 (44%), Gaps = 20/384 (5%)
Query: 219 LKSNSVVLDSRGYSHIMEAYSKLDDCESVV-KLFHEFES-RNLRDSKRYLGQI--YGVL- 273
L + V L ++ + ++ +Y + D V LF F + R++ Q+ YG L
Sbjct: 142 LVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLP 201
Query: 274 --------CESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICS-FASLHKVGEVEELL 324
SL GRV AL ++R M + I + ++ S + K+ + ELL
Sbjct: 202 TVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELL 261
Query: 325 REAKSRTKIKDPEV-YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
++ + R + +V Y L+ + E+ LL L++ M + ++ +++GF +
Sbjct: 262 QDME-RLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
A + + ++ + P VTY ++IN Y + + A + +E+M G + ++
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
Y+++I + + R A + V ++ + PN +++LI KN + +L+ M
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
R P++ ++ ++ A+ + +F+ +++ E +D + G+ D
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGK-D 499
Query: 564 QLV-KLLQDMKMEGTRLDQRLYQS 586
QLV KLLQ+ MEG + Q + +
Sbjct: 500 QLVKKLLQE--MEGKKFLQESFNN 521
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 153/353 (43%), Gaps = 45/353 (12%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAK 328
Y +L L + G+V++A+E + M + G+ ++ + L+ KV E++ E
Sbjct: 152 YTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEI 211
Query: 329 SRTKIK-DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKV-CDCMLCA---VVNGFSK 383
++K VY L+ + + +EK EA+K K+ C+ L ++N +
Sbjct: 212 KSARVKLSTVVYNALISGFCKAGRIEKA----EALKSYMSKIGCEPDLVTYNVLLNYYYD 267
Query: 384 ---------------RRGFSAAVRAYEKLISQG----------------YEP----GQVT 408
R G +Y +L+ + EP V+
Sbjct: 268 NNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVS 327
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y+++I +CR S KA ++FEEM QKG VV Y+S+I + R G A KL+ +M
Sbjct: 328 YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMT 387
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
E G P+ Y +++D + N+ + ++N+M ++ PD +SY S+I ++G
Sbjct: 388 ELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVT 447
Query: 529 TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
+LF + + D ++G + ++ K+ M +G LD+
Sbjct: 448 EAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDR 500
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 167/387 (43%), Gaps = 17/387 (4%)
Query: 230 GYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI-----YGVLCESLGKCGRVS 284
G+S I YS+ VK F ++ L LG I + V + L + +V
Sbjct: 74 GFSLIPFTYSRFISGLCKVKKFDLIDA--LLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 285 EALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
A++ F M ++G V Y+ LI KV + E+ D + LV
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 344 IMYVEEDLLEKTLEVV-EAMKDADVKVCDCMLCAVVNGFSK--RRGFSAAVRAYEKLISQ 400
+ ++ E+V E +K A VK+ + A+++GF K R + A+++Y I
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI-- 249
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G EP VTY ++N Y + +AE V EM + G +Y+ ++ + R
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKC 309
Query: 461 MKLVAK-MKERG-CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
+ K M+ RG C +V Y++LI+ R N R+ +L+ EM+++ + + V+YTS+I
Sbjct: 310 YNFMVKEMEPRGFC--DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLI 367
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
A+ + G +L ++ G DR ++ K G +D+ + DM
Sbjct: 368 KAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEIT 427
Query: 579 LDQRLYQSAWNAFIEAGLQLQAKWLQE 605
D Y S + +G +A L E
Sbjct: 428 PDAISYNSLISGLCRSGRVTEAIKLFE 454
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/434 (19%), Positives = 184/434 (42%), Gaps = 13/434 (2%)
Query: 126 TLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIA-ETLLNA 184
T I L + KK+D I ++ D + +PD + ++ R+ K A +T
Sbjct: 81 TYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCM 140
Query: 185 FKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDC 244
+ E V ++ + + V ++ + + V D++ + ++ C
Sbjct: 141 VQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGL-----C 195
Query: 245 ES-VVKLFHEFESRNLRDSKRYLGQI-YGVLCESLGKCGRVSEALEYFRVMTKKGIFESS 302
+ V L +E + ++ ++ L + Y L K GR+ +A M+K G
Sbjct: 196 HARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDL 255
Query: 303 V-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE-VVE 360
V Y+ L+ + + + E ++ E D Y +L+ + +K +V+
Sbjct: 256 VTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVK 315
Query: 361 AMKDADVKVCDCM-LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRL 419
M+ CD + ++ F + A R +E++ +G VTY S+I A+ R
Sbjct: 316 EMEPRGF--CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 420 SQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVY 479
+ A+K+ ++M + G + Y++++ +SG + A + M E P+ Y
Sbjct: 374 GNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISY 433
Query: 480 NSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI 539
NSLI R + + KL+ +MK ++ PD++++ +IG + + +++++
Sbjct: 434 NSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Query: 540 NGGVIDRAMAGIMV 553
G +DR ++ ++
Sbjct: 494 KGFTLDRDVSDTLI 507
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 108/226 (47%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
A++N + + Y++++ G+ P +TY ++ RL + ++ +++F+EM +
Sbjct: 224 AILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARD 283
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
GF Y+ ++ + G+ + A+ + MKE G P+V Y +LID R NL
Sbjct: 284 GFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEAC 343
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
+ +EM + PD V YT MI Y +GE + E+F E + G + + M+
Sbjct: 344 KYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRG 403
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
G+ + LL++M+ G + +Y + + +AG +A+
Sbjct: 404 LCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEAR 449
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 2/215 (0%)
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
AV + K + Y P + +Y +++N+ + QY E V+++M + GF V+ Y+ ++
Sbjct: 203 AVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLW 262
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR-EKNLRQLEKLWNEMKRRKVA 508
R G++ +L +M G P+ + YN L+ + G+ K L L L N MK +
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTL-NHMKEVGID 321
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
P + YT++I S+AG E C +E G D +M+ + G++D+ ++
Sbjct: 322 PSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEM 381
Query: 569 LQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
++M ++G + Y S AG +A WL
Sbjct: 382 FREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWL 416
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%)
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
R ++++ G+ P TY +++ + ++ A M++ G D V+ Y+++I
Sbjct: 275 RLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGL 334
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
R+G L + +M + GC+P+V Y +I + L + ++++ EM + P+
Sbjct: 335 SRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNV 394
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQD 571
+Y SMI AGEF L E G + + +V K G++ + K++++
Sbjct: 395 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIRE 454
Query: 572 MKMEG 576
M +G
Sbjct: 455 MVKKG 459
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%)
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
Y+ L+ + L K+ + L E D Y L+ + + + L + M
Sbjct: 256 TYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHM 315
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
K+ + +++G S+ A ++++ G P V Y +I Y +
Sbjct: 316 KEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGEL 375
Query: 423 NKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL 482
+KA+++F EM KG V Y+SMI +G R A L+ +M+ RGC PN VY++L
Sbjct: 376 DKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTL 435
Query: 483 IDMHGREKNLRQLEKLWNEMKRR 505
+ + L + K+ EM ++
Sbjct: 436 VSYLRKAGKLSEARKVIREMVKK 458
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 153/344 (44%), Gaps = 44/344 (12%)
Query: 261 DSKRYLGQIYGVLCESLG---KCGRVSEALEYFRVMTKKGIFES--SVYSTLICSFASLH 315
+S++YL + E+L K R AL+ F ++ K+ +E Y+ L +
Sbjct: 99 NSEKYLTLWPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCK 158
Query: 316 KVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
+ + L S +VY L+ +Y + +LL+K +E MK V DC
Sbjct: 159 QPDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKS----VSDC--- 211
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+P T+ +I+ C+L +++ + + EM
Sbjct: 212 ---------------------------KPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYL 244
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG-CKPNVWVYNSLIDMHGREKNLRQ 494
G V Y+++I YG++G ++A M E G P+V NS+I +G +N+R+
Sbjct: 245 GVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRK 304
Query: 495 LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE-TCTEL-FNEYRINGGVIDRAMAGIM 552
+E ++ + V PD ++ +I ++ KAG ++ C+ + F E R + I+
Sbjct: 305 MESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFS--LTTVTYNIV 362
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
+ F K G+I+++ + + MK +G + + Y S NA+ +AGL
Sbjct: 363 IETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGL 406
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/367 (20%), Positives = 152/367 (41%), Gaps = 43/367 (11%)
Query: 245 ESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SV 303
+S +K+F+ ++ + + + Y L + LG C + +A F VM +G+ + V
Sbjct: 125 QSALKIFNLLRKQHWYEPR---CKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDV 181
Query: 304 YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM------------------ 345
Y++LI + + + L KS + K P+V+ V++
Sbjct: 182 YTSLISVYGKSELLDKAFSTLEYMKSVSDCK-PDVFTFTVLISCCCKLGRFDLVKSIVLE 240
Query: 346 -------------------YVEEDLLEKTLEVVEAM-KDADVKVCDCMLCAVVNGFSKRR 385
Y + + E+ V+ M +D D C L +++ + R
Sbjct: 241 MSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGR 300
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
Y + G +P T+ +I ++ + Y K V + ME++ F V Y+
Sbjct: 301 NMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYN 360
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
+I +G++GR+ + KMK +G KPN Y SL++ + + + +++ + ++
Sbjct: 361 IVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNS 420
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
V D + +I AY +AG+ T EL+ + D+ M+ ++ G D +
Sbjct: 421 DVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAV 480
Query: 566 VKLLQDM 572
+L + M
Sbjct: 481 QELEKQM 487
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 165/385 (42%), Gaps = 15/385 (3%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFK-SDSEVAVFAFGSALRNYNKLHMFRRTV 213
VLPD T + LI+ R A + + + E V + S + K M R +
Sbjct: 44 VLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVL 103
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLG-QIYGV 272
+F+++ + + D Y+ +M Y KL K+ HE ++ + G Y +
Sbjct: 104 QLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE----DIHLAGLVPGIDTYNI 159
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTK 332
L ++L K G A+E F+ + + E Y+ LI +VG V+ ++RE K
Sbjct: 160 LLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGY 219
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
+ Y ++ MY + +EK L++ MK CAVV+ K A
Sbjct: 220 TPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYE 279
Query: 393 AYEKLISQGYEPGQ-VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
+L+ G V+Y +++N Y + + + + EE+E KG Y+ I++
Sbjct: 280 CMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKP--DDYTHTIIVN 337
Query: 452 G--RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
G G A K +A + E G +P+V N LID + ++ + +L+ M+ R
Sbjct: 338 GLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR---- 393
Query: 510 DKVSYTSMIGAYSKAGEFETCTELF 534
D+ +YTS++ K G ++L
Sbjct: 394 DEFTYTSVVHNLCKDGRLVCASKLL 418
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 136/290 (46%), Gaps = 6/290 (2%)
Query: 308 ICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADV 367
+C F +L + E LL + + D Y L+ Y +++ V M++A +
Sbjct: 23 LCKFRNLERA---ETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 368 KVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEK 427
+ ++++G +K + ++ +++++ G P +Y ++++ Y +L ++ +A K
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 428 VF-EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMH 486
+ E++ G + Y+ ++ +SG NA++L +K R KP + YN LI+
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGL 198
Query: 487 GREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDR 546
+ + + ++ + E+K+ P+ V+YT+M+ Y K E +LF + + G D
Sbjct: 199 CKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDG 258
Query: 547 AMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR-LDQRLYQSAWNAFIEAG 595
+V K G+ ++ + + ++ GTR D Y + N + + G
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDG 308
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 1/162 (0%)
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
+N+ C+ +AE + + + G V+ Y+++I Y R + A + +M+E G
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
+P+V YNSLI + L ++ +L++EM ++PD SY +++ Y K G +
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 533 LFNE-YRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
+ +E + G V I++ K G D ++L + +K
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLK 181
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 13/239 (5%)
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
VN K R A I G P +TY ++I Y R ++A V M + G
Sbjct: 20 VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI 79
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMH---GREKNLRQ 494
+ V Y+S+I ++ L ++L +M G P++W YN+L+ + GR +
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 495 LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA-GIMV 553
+ L ++ + P +Y ++ A K+G + ELF + V M I++
Sbjct: 140 I--LHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR--VKPELMTYNILI 195
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF-----IEAGLQLQAKWLQESF 607
K ++ + +++++K G + Y + + IE GLQL K +E +
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/433 (21%), Positives = 187/433 (43%), Gaps = 14/433 (3%)
Query: 122 PEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETL 181
P + T +++ + + E K +VLPD T + LI + L
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 182 LNAFKS-DSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSK 240
++A KS + V + + + +L + + E+++++ V + ++ ++ K
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 241 LDDCESVVKLFHEFESRNLRDSKRYLGQI--YGVLCESLGKCGRVSEALEYFRVMTKKGI 298
+ E+V + E L D + I Y L ++ K G +S ALE R M +KGI
Sbjct: 393 EEKREAVTRKVKE-----LVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI 447
Query: 299 FESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE 357
+++ +T++ + K+ E LL A R I D Y L++ + E+ +EK LE
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 358 VVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYC 417
+ + MK + +++ G A+ +++L G P T+ S+I YC
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 418 RLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG--RSGRLRNAMKLVAKMKERGCKPN 475
+ + KA + + E + F Y+ I++ G + G A+ + E + +
Sbjct: 568 KEGRVEKAFEFYNESIKHSFKP--DNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVD 624
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
YN++I ++K L++ L +EM+ + + PD+ +Y S I + G+ EL
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Query: 536 EYRINGGVIDRAM 548
++ G + R +
Sbjct: 685 KFSGKFGSMKRDL 697
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 181/422 (42%), Gaps = 25/422 (5%)
Query: 157 PDGATCSKLIEFCIR-QRKFKIA---ETLLNAFKSDSEVAVFAFGSALRNY-------NK 205
P+ TC+ L+ +R F I+ E + K + V F + Y +
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223
Query: 206 LHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSK-R 264
L M R V F+ V D+ Y+ I++A SK + +L + + L ++
Sbjct: 224 LGMLERMVSEFK------VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVT 277
Query: 265 YLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEEL 323
Y +YG C K G + EA + +M + + Y+ LI + + E EL
Sbjct: 278 YNNLVYGY-C----KLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 324 LREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
+ KS D Y L+ E L + +++E M++ VK + K
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 384 RRGFSAAVRAYEKLIS-QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
A R ++L+ G+ P VTY ++I AY ++ + A ++ EM QKG +
Sbjct: 393 EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
++++ + +L A L+ +RG + Y +LI RE+ + + ++W+EM
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
K+ K+ P ++ S+IG G+ E E F+E +G + D + ++ + K G++
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 563 DQ 564
++
Sbjct: 573 EK 574
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/448 (20%), Positives = 184/448 (41%), Gaps = 12/448 (2%)
Query: 153 YHVLPDGATCSKLIEFCIRQRKFK-IAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRR 211
+ V PD T + +++ ++ + + E LL+ K+ + + + Y KL +
Sbjct: 234 FKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKE 293
Query: 212 TVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYG 271
+ E +K +V+ D Y+ ++ ++L +S L+ Y
Sbjct: 294 AFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDV----VTYN 349
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRT 331
L + + G EA + M G+ + V + S L K + E + R+ K
Sbjct: 350 TLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNI--SLKWLCKEEKREAVTRKVKELV 407
Query: 332 KIK--DPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
+ P++ Y L+ Y++ L LE++ M +K+ L +++ K R
Sbjct: 408 DMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKL 467
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A +G+ +VTY ++I + R + KA ++++EM++ V ++S+
Sbjct: 468 DEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSL 527
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I G+ AM+ ++ E G P+ +NS+I + +E + + + +NE +
Sbjct: 528 IGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF 587
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
PD + ++ K G E FN I +D M+ F K ++ +
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYD 646
Query: 568 LLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
LL +M+ +G D+ Y S + +E G
Sbjct: 647 LLSEMEEKGLEPDRFTYNSFISLLMEDG 674
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 106/221 (47%), Gaps = 4/221 (1%)
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ---YNKAEKVFEEMEQKGFDKCVVAYS 445
A++ ++K+I +P +T +++ R + A +VF++M + G V ++
Sbjct: 149 VALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFN 208
Query: 446 SMIVMYGRSGRLRNAMKLVAKM-KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
++ Y G+L +A+ ++ +M E P+ YN+++ ++ L L++L +MK+
Sbjct: 209 VLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKK 268
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQ 564
+ P++V+Y +++ Y K G + ++ + + D I++ G + +
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 565 LVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
++L+ MK + D Y + + E GL L+A+ L E
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLME 369
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 104/203 (51%), Gaps = 1/203 (0%)
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
RRG YEK+ G++P Y +++A + ++ A V+E+ ++ G +
Sbjct: 207 RRGLRVYY-VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTT 265
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
+ ++ ++GR+ ++++ +M+E CKP+V+ Y ++I E NL ++W+EM+
Sbjct: 266 FMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMR 325
Query: 504 RRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
R ++ PD ++Y +++ K G E ELF E + +IDR + +++ F G++
Sbjct: 326 RDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVR 385
Query: 564 QLVKLLQDMKMEGTRLDQRLYQS 586
L +D+ G D +Y +
Sbjct: 386 SACNLWEDLVDSGYIADIGIYNA 408
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 105/499 (21%), Positives = 207/499 (41%), Gaps = 58/499 (11%)
Query: 85 PGTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFIL 144
P +E E L + D + + Y+++K + F+P ++ L++ +D L
Sbjct: 190 PPSEKQFEILIRMHADNRRGLRVYYVYEKMK-KFGFKPRVFLYNRIMDALVKNGYFDLAL 248
Query: 145 SVSEDFKIYHVLPDGATCSKLIE-FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNY 203
+V EDFK ++ + T L++ C R ++ E L ++ + VFA+ + ++
Sbjct: 249 AVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTL 308
Query: 204 NKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSK 263
++ V+++++ + + D Y ++ K E +LF E + + + +
Sbjct: 309 VSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDR 368
Query: 264 RYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKG-IFESSVYSTLICSFASLHKVGEVEE 322
+IY VL E G+V A + + G I + +Y+ +I S+++V + +
Sbjct: 369 ----EIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYK 424
Query: 323 LLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCM------LCA 376
L + A D E +++ YV + L V+E + + V D + LCA
Sbjct: 425 LFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCA 484
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT-YASVINAYCRLSQYNKAEKVFEEMEQK 435
+ A+ + L ++G+ G V+ Y ++ A ++ K+ +F EM +
Sbjct: 485 ------DEEKNAMALDVFYILKTKGH--GSVSVYNILMEALYKMGDIQKSLSLFYEMRKL 536
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL---------ID-- 484
GF+ +YS I + G ++ A K+ E C P++ Y SL ID
Sbjct: 537 GFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAV 596
Query: 485 -MHGRE------------------------KNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
+ RE N ++ K+ +EM + V ++V Y ++I
Sbjct: 597 MLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIIS 656
Query: 520 AYSKAGEFETCTELFNEYR 538
SK G + E+F E +
Sbjct: 657 GMSKHGTIKVAREVFTELK 675
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 171/407 (42%), Gaps = 61/407 (14%)
Query: 211 RTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIY 270
R V+EK+K Y+ IM+A K + + ++ +F+ L + +
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEE----STTF 266
Query: 271 GVLCESLGKCGRVSEALEYFRVM----TKKGIFESSVYSTLICSFASLHKVGEVEELLR- 325
+L + L K GR+ E LE + M K +F Y+ +I + S G ++ LR
Sbjct: 267 MILVKGLCKAGRIEEMLEILQRMRENLCKPDVF---AYTAMIKTLVS---EGNLDASLRV 320
Query: 326 -EAKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFS 382
+ R +IK P+V Y LV+ ++ +E+ E+ MK + + + ++ GF
Sbjct: 321 WDEMRRDEIK-PDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFV 379
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
+A +E L+ GY Y +VI C ++Q +KA K+F+ ++ +
Sbjct: 380 ADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFE 439
Query: 443 AYSSMIVMYGRSGRL---------------------------------RNAMKL----VA 465
S ++V Y RL +NAM L +
Sbjct: 440 TLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYIL 499
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
K K G +V VYN L++ + ++++ L+ EM++ PD SY+ I + + G
Sbjct: 500 KTKGHG---SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKG 556
Query: 526 EFETCTELFNEYRINGGVIDRAMAGI-MVGVFSKVGQIDQLVKLLQD 571
+ + F+E I + A + + ++G+ID ++ L+++
Sbjct: 557 DVKAACS-FHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRE 602
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 76/163 (46%)
Query: 433 EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL 492
+QKG+ AY++ R+G R A +L M +G P+ + LI MH +
Sbjct: 150 KQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRG 209
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
++ ++ +MK+ P Y ++ A K G F+ ++ +++ +G V + I+
Sbjct: 210 LRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMIL 269
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
V K G+I++++++LQ M+ + D Y + + G
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEG 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 98/224 (43%), Gaps = 4/224 (1%)
Query: 376 AVVNGFS---KRRG-FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEE 431
A N F+ R G F AA + E + SQG P + + +I + + + V+E+
Sbjct: 159 AAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEK 218
Query: 432 MEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKN 491
M++ GF V Y+ ++ ++G A+ + KE G + L+ +
Sbjct: 219 MKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGR 278
Query: 492 LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI 551
+ ++ ++ M+ PD +YT+MI G + +++E R + D G
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 552 MVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+V K G++++ +L +MK + +D+ +Y+ F+ G
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADG 382
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%)
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
YE+++ G+ P +TY V+ A RL + ++ ++ +EM + GF + Y+ ++
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
+ A+ L+ M+E G +P V + +LID R L + +E + PD V
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVV 363
Query: 513 SYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
YT MI Y GE E E+F E G + + M+ F G+ + LL++M
Sbjct: 364 CYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 573 KMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
+ G + +Y + N AG L+A
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAGKVLEA 451
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 104/228 (45%), Gaps = 10/228 (4%)
Query: 299 FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIK-DPEVYLKLVIMY--VEEDLLEKT 355
F V + I FA+ ++G+ + L R K P++Y ++++ +
Sbjct: 253 FTPDVLTYNIVMFANF-RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAA 311
Query: 356 LEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINA 415
L ++ M++ V+ +++G S+ A ++ + G P V Y +I
Sbjct: 312 LNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITG 371
Query: 416 YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN 475
Y + KAE++F+EM +KG V Y+SMI + +G+ + A L+ +M+ RGC PN
Sbjct: 372 YISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPN 431
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
VY++L++ NL+ K+ + K +K Y +I K
Sbjct: 432 FVVYSTLVN------NLKNAGKVLEAHEVVKDMVEKGHYVHLISKLKK 473
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 86/185 (46%)
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
R ++++ G+ P TY +++ ++ A + M + G + V+ ++++I
Sbjct: 278 RLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGL 337
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
R+G+L + + + GC P+V Y +I + L + E+++ EM + P+
Sbjct: 338 SRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNV 397
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQD 571
+Y SMI + AG+F+ L E G + + +V G++ + ++++D
Sbjct: 398 FTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKD 457
Query: 572 MKMEG 576
M +G
Sbjct: 458 MVEKG 462
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 105/197 (53%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+++ F +S A + +I + P VT++++INA+ + + ++AE++++EM +
Sbjct: 51 MIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS 110
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ Y+SMI + + R+ +A +++ M +GC P+V +++LI+ + + K +
Sbjct: 111 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 170
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
+++ EM RR + + V+YT++I + + G+ + +L NE G D M+
Sbjct: 171 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
Query: 557 SKVGQIDQLVKLLQDMK 573
++ + +L+D++
Sbjct: 231 CSKKELRKAFAILEDLQ 247
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 113/260 (43%), Gaps = 36/260 (13%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREA 327
I + + L K G A F M +KGIF + + Y+ +I SF + + ++LLR
Sbjct: 12 ISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRH- 70
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
++E + D+ A++N F K R
Sbjct: 71 ------------------------------MIEKQINPDIVT----FSALINAFVKERKV 96
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
S A Y++++ P +TY S+I+ +C+ + + A+++ + M KG VV +S++
Sbjct: 97 SEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTL 156
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I Y ++ R+ N M++ +M RG N Y +LI + +L + L NEM V
Sbjct: 157 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGV 216
Query: 508 APDKVSYTSMIGAYSKAGEF 527
APD +++ M+ E
Sbjct: 217 APDYITFHCMLAGLCSKKEL 236
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 99/205 (48%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
A+V+ K A + ++ +G P +TY +I+++C +++ A+++ M +K
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
+ +V +S++I + + ++ A ++ +M P YNS+ID ++ +
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
+++ + M + +PD V+++++I Y KA + E+F E G V + ++
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLD 580
F +VG +D LL +M G D
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPD 219
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 91/189 (48%)
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
V ++++ C+ + A+ +F EM +KG V+ Y+ MI + SGR +A +L+
Sbjct: 11 VISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRH 70
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
M E+ P++ +++LI+ +E+ + + E+++ EM R + P ++Y SMI + K
Sbjct: 71 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 527 FETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
+ + + G D ++ + K ++D +++ +M G + Y +
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 587 AWNAFIEAG 595
+ F + G
Sbjct: 191 LIHGFCQVG 199
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 13/371 (3%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLCESLGKCGRVSEALEY 289
Y+ ++ + KL + ++F R +R + Y G I G LC G+ EAL+
Sbjct: 285 YNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG-LC----GVGKTKEALQL 339
Query: 290 FRVMTKKGIFESSVYSTLI----CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
+M +K ++V +I C + E+ EL++ K RT+ + + L +
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK--KRRTRPDNITYNILLGGL 397
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCM-LCAVVNGFSKRRGFSAAVRAYEKLISQGYEP 404
+ DL E + + +KD+ D + A+++G K A+ Y+ L+ +
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 405 GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLV 464
+VT ++N+ + NKA ++++++ + Y++MI + ++G L A L+
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
KM+ +P+V+ YN L+ +E +L Q +L+ EM+R PD VS+ MI KA
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577
Query: 525 GEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
G+ ++ L G D ++ F K+G +D+ + M G D +
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637
Query: 585 QSAWNAFIEAG 595
S I G
Sbjct: 638 DSVLKYCISQG 648
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 38/286 (13%)
Query: 286 ALEYFRVMTKKGIFESSVYS--TLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
A +M K+G F +VY+ L+ + G+ LLRE + + + D Y ++
Sbjct: 126 AFGVLALMLKRG-FAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVI 184
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
+ E LEK LE+ MK + +++ F K A+ +++ G E
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
V Y S+I +C + ++ + +F+E+ ++G C + Y+++I + + G+L+ A ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 464 VAKMKERGCKPNVWVYNSLIDMH---GREKNLRQLEKLWNE------------------- 501
M ERG +PNV+ Y LID G+ K QL L E
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 502 -------------MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
MK+R+ PD ++Y ++G G+ + ++L
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 159/385 (41%), Gaps = 9/385 (2%)
Query: 231 YSH--IMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALE 288
Y+H +++ + +C V L E +L + CE GK + +ALE
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCE--GK--ELEKALE 198
Query: 289 YFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV 347
M G S V + LI +F K+ E L+E K D VY L+ +
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
+ L++ + + + + C ++ GF K A +E +I +G P
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
TY +I+ C + + +A ++ M +K + V Y+ +I + G + +A+++V M
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELM 378
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK--VAPDKVSYTSMIGAYSKAG 525
K+R +P+ YN L+ + +L + KL M + PD +SY ++I K
Sbjct: 379 KKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKEN 438
Query: 526 EFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
++++ G DR I++ K G +++ ++L + + + Y
Sbjct: 439 RLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYT 498
Query: 586 SAWNAFIEAGLQLQAKWLQESFHVS 610
+ + F + G+ AK L VS
Sbjct: 499 AMIDGFCKTGMLNVAKGLLCKMRVS 523
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/405 (19%), Positives = 175/405 (43%), Gaps = 16/405 (3%)
Query: 186 KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCE 245
+ DS A+ + + +R + KL + +FE + V + Y+ +++ + +
Sbjct: 276 RGDSPCAI-TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 246 SVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-Y 304
++L + ++ + Y ++ L K G V++A+E +M K+ ++ Y
Sbjct: 335 EALQLLNLMIEKDEEPN----AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEV---- 358
+ L+ + + E +LL + DP+V Y L+ +E+ L + L++
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLL 450
Query: 359 VEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCR 418
VE + D + +L N K + A+ ++++ TY ++I+ +C+
Sbjct: 451 VEKLGAGDRVTTNILL----NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCK 506
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
N A+ + +M V Y+ ++ + G L A +L +M+ P+V
Sbjct: 507 TGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVS 566
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYR 538
+N +ID + +++ E L M R ++PD +Y+ +I + K G + F++
Sbjct: 567 FNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMV 626
Query: 539 INGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRL 583
+G D + ++ G+ D+L +L++ + + LD+ L
Sbjct: 627 DSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKEL 671
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%)
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
V+ S ++ Y + + A ++A M +RG NV+ +N L+ R + L E
Sbjct: 108 VSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLRE 167
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
M+R + PD SY ++I + + E E EL NE + +G GI++ F K G+
Sbjct: 168 MRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGK 227
Query: 562 IDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+D+ + L++MK G D +Y S F + G
Sbjct: 228 MDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 2/213 (0%)
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
++ GF+ V A ++ +G+ + ++ CR + KA + EM + V
Sbjct: 121 RKTGFAFGVLAL--MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVF 178
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
+Y+++I + L A++L +MK GC ++ + LID + + + EM
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
K + D V YTS+I + GE + LF+E G ++ F K+GQ+
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQL 298
Query: 563 DQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ ++ + M G R + Y + G
Sbjct: 299 KEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 90/213 (42%)
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
+ R A Y K++ V+ + ++ Y ++ + A V M ++GF V
Sbjct: 84 RSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVY 143
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
++ ++ R+ A+ L+ +M+ P+V+ YN++I K L + +L NEM
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
K + V++ +I A+ KAG+ + E + G D + ++ F G++
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 563 DQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
D+ L ++ G Y + F + G
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLG 296
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/508 (20%), Positives = 201/508 (39%), Gaps = 39/508 (7%)
Query: 106 LAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSK- 164
LA +++ + + +F+ T + +IR L + D + + + K+ G CS+
Sbjct: 58 LALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKL-----QGFHCSED 112
Query: 165 -LIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKL-------HMFRRTVLVF 216
I R+ +AE + F E F +++ YN + + + +V+
Sbjct: 113 LFISVISVYRQVGLAERAVEMFYRIKE---FGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE- 275
+K + + Y+ +++A K + + KL E ++ + +CE
Sbjct: 170 RDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229
Query: 276 SLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKD 335
L K GR E E F + SVY+ LI H EL+RE + +
Sbjct: 230 GLVKEGR--ELAERFEPVV-------SVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYE 395
Y L+ + +E + M L ++V G R A+ +
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 396 KLISQ-GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
++I G +P V Y +++ +C KA VF ME+ G + Y S+I + +
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
G L A+ + KM GC PNV VY ++++ R ++ E L M + AP ++
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 515 TSMIGAYSKAGEFETCTELF----NEYRINGGVI--DRAMAGIMVGVFSKVGQIDQLVKL 568
+ I AG + ++F ++R ++ + + G+ +K +I++ L
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGL-----AKANRIEEAYGL 515
Query: 569 LQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
+++ M G Y + + AGL
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/345 (20%), Positives = 146/345 (42%), Gaps = 13/345 (3%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y+ ++ K D + +L E + + + + VLC S G++ A +
Sbjct: 249 YNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNS----GQIELAFSFL 304
Query: 291 RVMTKKGIFE-----SSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
M K+G SS+ + + +++R + + Y LV
Sbjct: 305 TQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVV---AYNTLVQG 361
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
+ + K + V M++ +++NGF+KR AV + K+++ G P
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
V Y +++ A CR S++ +AE + E M ++ V +++ I +GRL A K+
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 466 KMKERG-CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
+M+++ C PN+ YN L+D + + + L E+ R V +Y +++ A
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 525 GEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
G +L + ++G D +++ + K G+ ++ ++L
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 5/258 (1%)
Query: 267 GQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGE----VEE 322
G Y + + LGKC E M K + T+ L K G+ V+
Sbjct: 166 GHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDA 225
Query: 323 LLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFS 382
L KS D L+ V+E+ +E EV + D +K +++GF
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFC 284
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
K R F A + + + P VTY S + AYC+ + + ++ EEM + G + VV
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
Y+ ++ G+S ++ A+ + KMKE GC P+ Y+SLI + + + +++ +M
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 503 KRRKVAPDKVSYTSMIGA 520
+ V D + Y +MI A
Sbjct: 405 TNQGVRRDVLVYNTMISA 422
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 122/277 (44%), Gaps = 4/277 (1%)
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTK 332
L ++L K + A E F + ++ ++ LI F K + ++ K
Sbjct: 245 LMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEF 304
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
D Y V Y +E + E++E M++ V++ K + + A+
Sbjct: 305 TPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALG 364
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
YEK+ G P Y+S+I+ + ++ A ++FE+M +G + V+ Y++MI
Sbjct: 365 VYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAAL 424
Query: 453 RSGRLRNAMKLVAKMKE---RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
R A++L+ +M++ C PNV Y L+ M +K ++ L L + M + V+
Sbjct: 425 HHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSI 484
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDR 546
D +Y +I +G+ E LF E + G++ R
Sbjct: 485 DVSTYILLIRGLCMSGKVEEAC-LFFEEAVRKGMVPR 520
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 105/228 (46%), Gaps = 12/228 (5%)
Query: 374 LCAVVNGFSKRRGFSAAVRAY-EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
+ V+ +K ++ AV A+ E S G + + S+++A + + A +VF
Sbjct: 206 MSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF--- 262
Query: 433 EQKGFDKC---VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
K FD ++ +I + ++ + +A ++ MK P+V Y S ++ + +E
Sbjct: 263 -LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE 321
Query: 490 KNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA 549
+ R++ ++ EM+ P+ V+YT ++ + K+ + ++ + + +G V D
Sbjct: 322 GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 550 GIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQ 597
++ + SK G+ ++ +DM +G R D +Y N I A L
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVY----NTMISAALH 425
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 176/415 (42%), Gaps = 45/415 (10%)
Query: 122 PEKSTLKHVIRY------LMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKF 175
P+K + V Y L +++D V E +V PD TC+ LI
Sbjct: 265 PDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILIT-------- 316
Query: 176 KIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIM 235
TL A +S EV +FEK+ V + ++
Sbjct: 317 ----TLRKAGRSAKEVWE---------------------IFEKMSEKGVKWSQDVFGGLV 351
Query: 236 EAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK 295
+++ E + + E E + +R + +Y L ++ K + E F M
Sbjct: 352 KSFCDEGLKEEALVIQTEMEKKGIRSNT----IVYNTLMDAYNKSNHIEEVEGLFTEMRD 407
Query: 296 KGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE-EDLLE 353
KG+ S+ Y+ L+ ++A + VE LLRE + + + Y L+ Y + + +
Sbjct: 408 KGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSD 467
Query: 354 KTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVI 413
+ MK +K A+++ +S A ++E++ +G +P TY SV+
Sbjct: 468 MAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVL 527
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
+A+ R K ++++ M ++ + Y++++ + + G A +V++ + G +
Sbjct: 528 DAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQ 587
Query: 474 PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
P+V YN L++ + R +L +L EM + PD ++Y++MI A+ + +F+
Sbjct: 588 PSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFK 642
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 1/184 (0%)
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR-LRNAMKLVAKM 467
Y + I+ +Y+ A +V+E M++ V + +I ++GR + ++ KM
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
E+G K + V+ L+ E + + EM+++ + + + Y +++ AY+K+
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
E LF E R G A I++ +++ Q D + LL++M+ G + + Y
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCL 455
Query: 588 WNAF 591
+A+
Sbjct: 456 ISAY 459
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
D + Y L+++++ + L K E+ E+M+ D + ++ +K AA + +
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+++ + P ++S++++ + + + + KV+ EM+ G + S+I Y ++
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKA 396
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
G+L A++L +MK+ G +PN +Y +I+ H + L ++ +M++ P +Y
Sbjct: 397 GKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Query: 515 TSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI-MVGVFSKVGQIDQLVKLLQDMK 573
+ ++ ++ +G+ ++ +++N N G+ + I ++ + + +D K+L +MK
Sbjct: 457 SCLLEMHAGSGQVDSAMKIYNSM-TNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMK 515
Query: 574 MEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQ 604
G +D +A + L KWL+
Sbjct: 516 AMGYSVDVCASDVLMIYIKDASVDLALKWLR 546
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 201 RNYNKLHMF-------RRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHE 253
+ YN L M + ++E ++ +LD Y I+ + +K ++ KLF +
Sbjct: 279 QTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQ 338
Query: 254 FESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFA 312
+ R LR S ++ L +S+GK GR+ +++ + M G S +++ +LI S+A
Sbjct: 339 MKERKLRPS----FSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYA 394
Query: 313 SLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDC 372
K+ L E K + +Y ++ + + LE + V + M+ A
Sbjct: 395 KAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPS 454
Query: 373 MLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
++ + +A++ Y + + G PG +Y S++ + A K+ EM
Sbjct: 455 TYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEM 514
Query: 433 EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
+ G+ V A S ++++Y + + A+K + M G K N ++ L +
Sbjct: 515 KAMGYSVDVCA-SDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFE 565
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 147/351 (41%), Gaps = 18/351 (5%)
Query: 195 AFGSALRNYN-------KLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESV 247
F NYN K+ F+ + + +K+ + L ++ I Y++ +
Sbjct: 123 GFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKL-LSKETFALISRRYARARKVKEA 181
Query: 248 VKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV--YS 305
+ FH+ E + + + ++L K V +A + F M KK FE + Y+
Sbjct: 182 IGAFHKMEEFGFKME----SSDFNRMLDTLSKSRNVGDAQKVFDKMKKKR-FEPDIKSYT 236
Query: 306 TLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA 365
L+ + + V+E+ RE K D Y ++ + + E+ + M+
Sbjct: 237 ILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQR 296
Query: 366 DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKA 425
+ K + C+++NG + + A+ +E+ S G+ TY +++ AYC + A
Sbjct: 297 NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA 356
Query: 426 EKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDM 485
K +EM KG Y ++ R R + A ++ M C+P V Y ++ M
Sbjct: 357 YKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRM 413
Query: 486 HGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
++ L K+W+EMK + V P ++S+I A + + E FNE
Sbjct: 414 FCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNE 464
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 151/368 (41%), Gaps = 41/368 (11%)
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFES--RNLRDSKRYLGQIYGVLCESLGKCGRVS 284
+ +G+ H Y+ L + +K F S +++ K + + ++ + +V
Sbjct: 120 NQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVK 179
Query: 285 EALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
EA+ F M + G ESS ++ ++ + + VG+ +++ + K + D + Y L+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
+ +E L + EV MKD +G+E
Sbjct: 240 EGWGQELNLLRVDEVNREMKD-----------------------------------EGFE 264
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P V Y +INA+C+ +Y +A + F EMEQ+ + S+I G +L +A++
Sbjct: 265 PDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEF 324
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+ K G YN+L+ + + + K +EM+ + V P+ +Y ++ +
Sbjct: 325 FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR 384
Query: 524 AGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRL 583
+ E++ V + IMV +F ++D +K+ +MK +G +
Sbjct: 385 MQRSKEAYEVYQTMSCEPTV---STYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHM 441
Query: 584 YQSAWNAF 591
+ S A
Sbjct: 442 FSSLITAL 449
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 156/373 (41%), Gaps = 14/373 (3%)
Query: 165 LIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSV 224
LIE + ++FK+ +L++ K+ ++ F R Y + + + F K++
Sbjct: 134 LIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKEAIGAFHKMEEFGF 193
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI--YGVLCESLGKCGR 282
++S ++ +++ SK + K+F + + KR+ I Y +L E G+
Sbjct: 194 KMESSDFNRMLDTLSKSRNVGDAQKVFDKMKK------KRFEPDIKSYTILLEGWGQELN 247
Query: 283 VSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
+ E R M +G FE V Y +I + K E E + R P ++
Sbjct: 248 LLRVDEVNREMKDEG-FEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFC 306
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
L+ E L LE E K + + A+V + + A + +++ +
Sbjct: 307 SLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLK 366
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G P TY +++ R+ + +A +V++ M + V Y M+ M+ RL A
Sbjct: 367 GVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMA 423
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+K+ +MK +G P + +++SLI E L + + +NEM + P ++ +
Sbjct: 424 IKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQT 483
Query: 521 YSKAGEFETCTEL 533
G + T+L
Sbjct: 484 LLDEGRKDKVTDL 496
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/389 (19%), Positives = 157/389 (40%), Gaps = 30/389 (7%)
Query: 106 LAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKL 165
LA ++ +++ F+ S +I L + K++ I S+ +D K +L
Sbjct: 110 LALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKET----- 164
Query: 166 IEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKL-------HMFRRTVLVFEK 218
F + R++ A + A + ++ F F ++N++ VF+K
Sbjct: 165 --FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDK 222
Query: 219 LKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLG 278
+K D + Y+ ++E + + + V ++ E + YG++ +
Sbjct: 223 MKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDV----VAYGIIINAHC 278
Query: 279 KCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPE 337
K + EA+ +F M ++ S ++ +LI S K+ + E +KS +
Sbjct: 279 KAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAP 338
Query: 338 VYLKLVIMYVEEDLLEKTLEVVEAMK----DADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
Y LV Y +E + V+ M+ + + D +L ++ + A
Sbjct: 339 TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR-------MQRSKEA 391
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
YE + EP TY ++ +C + + A K+++EM+ KG + +SS+I
Sbjct: 392 YEVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCH 451
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSL 482
+L A + +M + G +P +++ L
Sbjct: 452 ENKLDEACEYFNEMLDVGIRPPGHMFSRL 480
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 106/231 (45%), Gaps = 4/231 (1%)
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
+ +A VK+ ++ V+ S + +V + + +G++ Y ++I + ++ Q
Sbjct: 85 LNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAE-NQKGFKHTTSNYNALIESLGKIKQ 143
Query: 422 YNKAEKVFEEME-QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYN 480
+ + ++M+ +K K A S Y R+ +++ A+ KM+E G K +N
Sbjct: 144 FKLIWSLVDDMKAKKLLSKETFALISR--RYARARKVKEAIGAFHKMEEFGFKMESSDFN 201
Query: 481 SLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRIN 540
++D + +N+ +K++++MK+++ PD SYT ++ + + E+ E +
Sbjct: 202 RMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDE 261
Query: 541 GGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
G D GI++ K + ++ ++ +M+ + ++ S N
Sbjct: 262 GFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGL 312
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 159/389 (40%), Gaps = 48/389 (12%)
Query: 198 SALRNYNKLHMFRRTVLVFEKLKSNSVV-LDSRGYSHIMEAYSKLDDCESVVKLFHEFES 256
++LR + K H F F +KS S+ +++ Y+ M++ +L E
Sbjct: 161 NSLREWQKTHTF------FNWVKSKSLFPMETIFYNVTMKSLR----FGRQFQLIEEMAL 210
Query: 257 RNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLH 315
++D Y + +C ++A+E+F M K G+ V YS ++ ++
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 316 KVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
KV EV L A + D + L M+ E + V++ MK DVK
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVK------- 323
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
P V Y +++ A R + A +F EM +
Sbjct: 324 ----------------------------PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA 355
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G ++++ +YG++ R+A++L +MK + + +YN+L++M +
Sbjct: 356 GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEA 415
Query: 496 EKLWNEMKRR-KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
E+L+N+MK + PD SYT+M+ Y G+ E ELF E G ++ +V
Sbjct: 416 ERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQ 475
Query: 555 VFSKVGQIDQLVKLLQDMKMEGTRLDQRL 583
K +ID +V + G + D RL
Sbjct: 476 CLGKAKRIDDVVYVFDLSIKRGVKPDDRL 504
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%)
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
+++ G E +TY+++I R + YNKA + FE M + G V YS+++ +Y +SG
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
++ + L + G KP+ ++ L M G + + + EMK V P+ V Y
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 516 SMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
+++ A +AG+ LFNE G + +V ++ K ++L ++MK +
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 576 GTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+D LY + N + GL+ +A+ L
Sbjct: 391 KWPMDFILYNTLLNMCADIGLEEEAERL 418
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 101/210 (48%), Gaps = 1/210 (0%)
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
++ A+ +E++ G P +VTY+++++ Y + + + ++E G+ +A+S
Sbjct: 237 YNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSV 296
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
+ M+G +G ++ +MK KPNV VYN+L++ GR L+NEM
Sbjct: 297 LGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAG 356
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
+ P++ + T+++ Y KA +L+ E + +D + ++ + + +G ++
Sbjct: 357 LTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAE 416
Query: 567 KLLQDMKME-GTRLDQRLYQSAWNAFIEAG 595
+L DMK R D Y + N + G
Sbjct: 417 RLFNDMKESVQCRPDNFSYTAMLNIYGSGG 446
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/308 (20%), Positives = 129/308 (41%), Gaps = 11/308 (3%)
Query: 173 RKFKIAETL-LNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGY 231
R+F++ E + L K E+ + + + + +++ + + FE++ ++ D Y
Sbjct: 200 RQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTY 259
Query: 232 SHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGR---VSEALE 288
S I++ YSK E V+ L+ R + + + VL + G+ G + L+
Sbjct: 260 SAILDVYSKSGKVEEVLSLYE----RAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQ 315
Query: 289 YFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE 348
+ M K VY+TL+ + K G L E + + LV +Y +
Sbjct: 316 EMKSMDVKP--NVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGK 373
Query: 349 EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLI-SQGYEPGQV 407
L++ E MK + + ++N + A R + + S P
Sbjct: 374 ARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNF 433
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
+Y +++N Y + KA ++FEEM + G V+ + ++ G++ R+ + + +
Sbjct: 434 SYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLS 493
Query: 468 KERGCKPN 475
+RG KP+
Sbjct: 494 IKRGVKPD 501
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 137/309 (44%), Gaps = 37/309 (11%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
+ +L L G ++EALE M K G+ SV Y+ L F L + E++R+
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV-VNGFSKRRGF 387
+ D Y L+ + ++ L +++ M ++ + C+V ++G K
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK------------ 435
A+ + ++ + G P V Y+ VI+ C+L +++ A +++EM K
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 436 -----------------------GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
G +V Y+ +I Y +SG + A++L + E G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
P+V +NSLI + + +N+ + K+ + +K +AP VSYT+++ AY+ G ++ E
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 533 LFNEYRING 541
L E + G
Sbjct: 560 LRREMKAEG 568
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 162/392 (41%), Gaps = 32/392 (8%)
Query: 146 VSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYN 204
+S F++ ++P CS ++ + + A +L N K+D + A+ +
Sbjct: 354 LSRGFELNSIIP----CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 205 KLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKR 264
KL F + +++++ ++ +SR + ++ L C+ + L E+R+L DS
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALL-----LGLCQKGMLL----EARSLLDSLI 460
Query: 265 YLGQ-----IYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVG 318
G+ +Y ++ + K G + EALE F+V+ + GI S + +++LI + +
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 319 EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVV 378
E ++L K Y L+ Y + E+ MK + + +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 379 NGFSK------------RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAE 426
G + R F + + S+G P Q+TY ++I CR+ + A
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 427 KVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMH 486
E M+ + D Y+ +I G +R A + ++E+ + + Y +LI H
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Query: 487 GREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
+ + KL++++ R Y+++I
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 33/316 (10%)
Query: 278 GKC--GRVSEALEYFRVMTKKGIFESSVYSTLICS--FASLHKVGEVEE---LLREAKSR 330
G+C G + L + M +G FE + S + CS + L K G ++E L + K+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRG-FE--LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA 390
D Y ++ + + L + + M D + A++ G ++ A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
+ LIS G V Y VI+ Y + +A ++F+ + + G V ++S+I
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
Y ++ + A K++ +K G P+V Y +L+D + N + +++L EMK + P
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
V+Y+ + + + E C + E +F K Q L+
Sbjct: 573 NVTYSVIFKGLCRGWKHENCNHVLRER-----------------IFEKCKQG------LR 609
Query: 571 DMKMEGTRLDQRLYQS 586
DM+ EG DQ Y +
Sbjct: 610 DMESEGIPPDQITYNT 625
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 203/510 (39%), Gaps = 35/510 (6%)
Query: 102 KTEELAFDYYQRLKDRPVFRPEK-STL--KHVIRYLMRFKKWDFILS--VSEDFKIYHVL 156
++ +L+ +++ L+D FR STL HV+ RFK+ IL + E+
Sbjct: 62 ESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWE 121
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNK-LHMFRRTVL- 214
G L+ R R + +L K D + V + ++YN L+ FR T
Sbjct: 122 STGLVWDMLLFLSSRLRMVDDSLYILKKMK-DQNLNV-----STQSYNSVLYHFRETDKM 175
Query: 215 --VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGV 272
V++++K + YS +++ + E V E +++ S I
Sbjct: 176 WDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSG 231
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYS--TLICSFASLHKVGEVEELLREAKSR 330
C K G V A +F + K G+ SVYS LI + + E EL +
Sbjct: 232 YC----KLGFVDMAKSFFCTVLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNGFSKRRG 386
D Y L + ++ EV+ M D DV +LC G +
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC----GQCQLGN 342
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASV-INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
+ + ++S+G+E + SV ++ C+ + ++A +F +M+ G +VAYS
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
+I + G+ A+ L +M ++ PN + +L+ ++ L + L + +
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
D V Y +I Y+K+G E ELF G A ++ + K I +
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 566 VKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
K+L +K+ G Y + +A+ G
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 162/374 (43%), Gaps = 26/374 (6%)
Query: 217 EKLKSNSVVLDSRG-YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
E L + + D RG Y I+ K+ + H + R L R++ + ++ E
Sbjct: 4 ESLPTTNSTSDHRGFYKEILFGMKKI----GFREFLHGYHFRGLVSELRHV-HVEEIMDE 58
Query: 276 SLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICS--------FASLHKVGEVEELLREA 327
+ + +S + +F+ + F S +STL+ S F L + +E+LL+E
Sbjct: 59 LMSESSDLS--VWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVI--LEQLLQEE 114
Query: 328 KSRTKIKDPE-VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
+ K + V+ L+ + +++ +L +++ MKD ++ V +V+ F R
Sbjct: 115 GTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RE 171
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
Y+++ + + TY++V++ CR + A E K VV+++S
Sbjct: 172 TDKMWDVYKEI----KDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNS 227
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
++ Y + G + A + + G P+V+ +N LI+ ++ + +L ++M +
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
V PD V+Y + + G E+ + G D I++ ++G ID +
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 567 KLLQDMKMEGTRLD 580
LL+DM G L+
Sbjct: 348 VLLKDMLSRGFELN 361
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 100/233 (42%), Gaps = 1/233 (0%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++++G+ K A + ++ G P ++ +IN C + +A ++ +M +
Sbjct: 227 SIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G + V Y+ + + G + A +++ M ++G P+V Y L+ + N+
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMG 346
Query: 496 EKLWNEMKRRKVAPDKVSYTS-MIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
L +M R + + S M+ K G + LFN+ + +G D I++
Sbjct: 347 LVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH 406
Query: 555 VFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESF 607
K+G+ D + L +M + + R + + + G+ L+A+ L +S
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 182/413 (44%), Gaps = 16/413 (3%)
Query: 199 ALRNYNKLHMFRRTVLVFEKLKSNS-VVLDSRGYSHIMEAYSKLDDCESVVKLF-HEFES 256
+LRN K +F + + S + LD + ++ ++++Y + VKLF H +S
Sbjct: 55 SLRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKS 114
Query: 257 R-NLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTL-ICSFASL 314
+ N R + + C + +S +M G+ V + + + S
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPD--SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 172
Query: 315 HKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA-DVKVCDCM 373
+V E ++L++E + D Y L+ + L E V+ M+D DVK
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
+++ + A+ KL + G++P Y +++ +C LS+ ++A V+++M+
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
++G + + Y+++I ++GR+ A + M + G +P+ Y SL++ R+
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESL 352
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
L EM+ R AP+ +Y +++ KA + EL+ + +G ++ +V
Sbjct: 353 GALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQES 606
K G++ + ++ D ++ L SA++ L+ KWL+++
Sbjct: 413 RSLVKSGKVAEAYEVF-DYAVDSKSLSD---ASAYST-----LETTLKWLKKA 456
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 171/381 (44%), Gaps = 15/381 (3%)
Query: 178 AETLLNAFKSDSEVAV-FAF-GSALRNYNKLHMFRRTVLVFEK-LKSNSVVLDSRGYSHI 234
A++L N+ + S + + F S L++Y + + TV +F+ LKS R I
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 235 MEAYSKLDDC---ESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFR 291
+ +++ C +S + H + + + + SL + GRV EA + +
Sbjct: 128 LLSHA----CRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 292 VMTKK-GIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV-EE 349
+T+K ++ Y+ L+ + V E + E + +K V ++I V
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 350 DLLEKTLEVVEAMKDADVKVCDCML-CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
L + + +V + +A K DC L ++ GF S AV Y+K+ +G EP Q+T
Sbjct: 244 KNLREAMYLVSKLGNAGFKP-DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y ++I + + +A + M G++ Y+S++ R G A+ L+ +M+
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEME 362
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
RGC PN YN+L+ + + + + +L+ MK V + Y +++ + K+G+
Sbjct: 363 ARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVA 422
Query: 529 TCTELFNEYRINGGVIDRAMA 549
E+F +Y ++ + A A
Sbjct: 423 EAYEVF-DYAVDSKSLSDASA 442
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 189/448 (42%), Gaps = 45/448 (10%)
Query: 107 AFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLI 166
AF +++++ R + + +I L + K + LS+ + K + PD KL+
Sbjct: 302 AFQLFEKMR-RMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLL 360
Query: 167 -EFCIRQRKFKIAETLLNAFKSDSEVAVFA--FGSALRN--YNKLHMFRRTVL------- 214
F +I E ++ S + ++ F +RN ++ + F + ++
Sbjct: 361 CSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDG 420
Query: 215 ---VFEKLKSN--SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI 269
+ + LK + +++ DS S ++ K + + V L H+ L +
Sbjct: 421 VSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGP----MM 476
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHK----VGEVEELLR 325
Y + E + K GR E+L+ M G+ S TL C + L + VG ++ L
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQF--TLNCIYGCLAERCDFVGALDLL-- 532
Query: 326 EAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCML------CAVVN 379
+ + E ++K V++ L + V+A K D + L A ++
Sbjct: 533 ---KKMRFYGFEPWIKHTTFLVKK--LCENGRAVDACKYLDDVAGEGFLGHMVASTAAID 587
Query: 380 GFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDK 439
G K G + + + + G+ P + Y +I A C+ + +A+ +F EM KG
Sbjct: 588 GLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 440 CVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKL- 498
V Y+SMI + + G + + + +M E P+V Y SLI HG + R E +
Sbjct: 648 TVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLI--HGLCASGRPSEAIF 705
Query: 499 -WNEMKRRKVAPDKVSYTSMIGAYSKAG 525
WNEMK + P+++++ ++I K G
Sbjct: 706 RWNEMKGKDCYPNRITFMALIQGLCKCG 733
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 109/246 (44%)
Query: 283 VSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKL 342
VSE ++ + K + +S S +I +KV LL + I P +Y +
Sbjct: 421 VSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNI 480
Query: 343 VIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGY 402
+ +E E++L+++ MKDA V+ L + ++R F A+ +K+ G+
Sbjct: 481 IEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGF 540
Query: 403 EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMK 462
EP ++ C + A K +++ +GF +VA ++ I ++ + ++
Sbjct: 541 EPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLE 600
Query: 463 LVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYS 522
L + G P+V Y+ LI + + + L+NEM + + P +Y SMI +
Sbjct: 601 LFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWC 660
Query: 523 KAGEFE 528
K GE +
Sbjct: 661 KEGEID 666
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 98/201 (48%), Gaps = 5/201 (2%)
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G+ + T V+ YC + +A VF E+ +G+ ++ + ++V + + G++ A
Sbjct: 209 GFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKA 267
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+L+ ++ER + N Y LI +E + + +L+ +M+R + D Y +IG
Sbjct: 268 FELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGG 327
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK-LLQDMKMEGTRL 579
K + E L+ E + +G DR + G ++ FS+ ++ ++ + ++ D+ + L
Sbjct: 328 LCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVML 387
Query: 580 DQRLYQSAWNAFIEAGLQLQA 600
LY+S + FI L +A
Sbjct: 388 ---LYKSLFEGFIRNDLVHEA 405
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 355 TLEVVEA----MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYA 410
++E+VEA M+D L V+ + A+ + +++S+G+ ++
Sbjct: 194 SVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTI 253
Query: 411 SVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER 470
V+ ++C+ Q +KA ++ E +E++ Y +I + + R+ A +L KM+
Sbjct: 254 LVV-SFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRM 312
Query: 471 GCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETC 530
G ++ +Y+ LI + K+L L+ E+KR + PD+ ++ ++S+ E
Sbjct: 313 GMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRI 372
Query: 531 TELF 534
TE+
Sbjct: 373 TEVI 376
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 80/412 (19%), Positives = 159/412 (38%), Gaps = 70/412 (16%)
Query: 195 AFGSALRNYNKLHMFRRTVLVFEKLKSNSV-VLDSRGYSHIMEAYSKLDDCESVVKLFHE 253
AFG +R + VF++++ + V ++ Y+ ++EA SK + S V+L E
Sbjct: 143 AFGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSN--SSSVELV-E 199
Query: 254 FESRNLRD-----SKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLI 308
+ +RD K L + V C + G+ AL F + +G + + + L+
Sbjct: 200 ARLKEMRDCGFHFDKFTLTPVLQVYCNT----GKSERALSVFNEILSRGWLDEHISTILV 255
Query: 309 CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK 368
SF K G+V+ K E++E +++ D++
Sbjct: 256 VSFC---KWGQVD--------------------------------KAFELIEMLEERDIR 280
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
+ C +++GF K A + +EK+ G Y +I C+ A +
Sbjct: 281 LNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSL 340
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR 488
+ E+++ G ++ + L +++ ++ K + +Y SL + R
Sbjct: 341 YLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDK--KSVMLLYKSLFEGFIR 398
Query: 489 E----------KNL---------RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFET 529
+NL ++ KL + + + PD S + +I KA + +
Sbjct: 399 NDLVHEAYSFIQNLMGNYESDGVSEIVKLLKD-HNKAILPDSDSLSIVINCLVKANKVDM 457
Query: 530 CTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
L ++ NG + M ++ K G+ ++ +KLL +MK G Q
Sbjct: 458 AVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQ 509
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 139/309 (44%), Gaps = 37/309 (11%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
+ +L L G ++EALE M K G+ SV Y+ L F L + E++R+
Sbjct: 260 HNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML 319
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV-VNGFSKRRGF 387
+ D Y L+ + ++ L +++ M ++ + C+V ++G K
Sbjct: 320 DKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRI 379
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME-------------- 433
A+ + ++ + G P V Y+ VI+ C+L +++ A +++EM
Sbjct: 380 DEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGAL 439
Query: 434 -----QKG--------FDKCV--------VAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
QKG D + V Y+ +I Y +SG + A++L + E G
Sbjct: 440 LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGI 499
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
P+V +NSLI + + +N+ + K+ + +K +AP VSYT+++ AY+ G ++ E
Sbjct: 500 TPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDE 559
Query: 533 LFNEYRING 541
L E + G
Sbjct: 560 LRREMKAEG 568
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 162/392 (41%), Gaps = 32/392 (8%)
Query: 146 VSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYN 204
+S F++ ++P CS ++ + + A +L N K+D + A+ +
Sbjct: 354 LSRGFELNSIIP----CSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 205 KLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKR 264
KL F + +++++ ++ +SR + ++ L C+ + L E+R+L DS
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALL-----LGLCQKGMLL----EARSLLDSLI 460
Query: 265 YLGQ-----IYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVG 318
G+ +Y ++ + K G + EALE F+V+ + GI S + +++LI + +
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 319 EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVV 378
E ++L K Y L+ Y + E+ MK + + +
Sbjct: 521 EARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIF 580
Query: 379 NGFSK------------RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAE 426
G + R F + + S+G P Q+TY ++I CR+ + A
Sbjct: 581 KGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAF 640
Query: 427 KVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMH 486
E M+ + D Y+ +I G +R A + ++E+ + + Y +LI H
Sbjct: 641 VFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAH 700
Query: 487 GREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
+ + KL++++ R Y+++I
Sbjct: 701 CVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVI 732
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 33/316 (10%)
Query: 278 GKC--GRVSEALEYFRVMTKKGIFESSVYSTLICS--FASLHKVGEVEE---LLREAKSR 330
G+C G + L + M +G FE + S + CS + L K G ++E L + K+
Sbjct: 336 GQCQLGNIDMGLVLLKDMLSRG-FE--LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA 390
D Y ++ + + L + + M D + A++ G ++ A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
+ LIS G V Y VI+ Y + +A ++F+ + + G V ++S+I
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYG 512
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
Y ++ + A K++ +K G P+V Y +L+D + N + +++L EMK + P
Sbjct: 513 YCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPT 572
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
V+Y+ + + + E C + E +F K Q L+
Sbjct: 573 NVTYSVIFKGLCRGWKHENCNHVLRER-----------------IFEKCKQG------LR 609
Query: 571 DMKMEGTRLDQRLYQS 586
DM+ EG DQ Y +
Sbjct: 610 DMESEGIPPDQITYNT 625
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 114/510 (22%), Positives = 203/510 (39%), Gaps = 35/510 (6%)
Query: 102 KTEELAFDYYQRLKDRPVFRPEK-STL--KHVIRYLMRFKKWDFILS--VSEDFKIYHVL 156
++ +L+ +++ L+D FR STL HV+ RFK+ IL + E+
Sbjct: 62 ESSDLSVWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVILEQLLQEEGTFRKWE 121
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNK-LHMFRRTVL- 214
G L+ R R + +L K D + V + ++YN L+ FR T
Sbjct: 122 STGLVWDMLLFLSSRLRMVDDSLYILKKMK-DQNLNV-----STQSYNSVLYHFRETDKM 175
Query: 215 --VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGV 272
V++++K + YS +++ + E V E +++ S I
Sbjct: 176 WDVYKEIKDK----NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSG 231
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYS--TLICSFASLHKVGEVEELLREAKSR 330
C K G V A +F + K G+ SVYS LI + + E EL +
Sbjct: 232 YC----KLGFVDMAKSFFCTVLKCGLV-PSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNGFSKRRG 386
D Y L + ++ EV+ M D DV +LC G +
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLC----GQCQLGN 342
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASV-INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
+ + ++S+G+E + SV ++ C+ + ++A +F +M+ G +VAYS
Sbjct: 343 IDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYS 402
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
+I + G+ A+ L +M ++ PN + +L+ ++ L + L + +
Sbjct: 403 IVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS 462
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
D V Y +I Y+K+G E ELF G A ++ + K I +
Sbjct: 463 GETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEA 522
Query: 566 VKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
K+L +K+ G Y + +A+ G
Sbjct: 523 RKILDVIKLYGLAPSVVSYTTLMDAYANCG 552
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 162/374 (43%), Gaps = 26/374 (6%)
Query: 217 EKLKSNSVVLDSRG-YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
E L + + D RG Y I+ K+ + H + R L R++ + ++ E
Sbjct: 4 ESLPTTNSTSDHRGFYKEILFGMKKI----GFREFLHGYHFRGLVSELRHV-HVEEIMDE 58
Query: 276 SLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICS--------FASLHKVGEVEELLREA 327
+ + +S + +F+ + F S +STL+ S F L + +E+LL+E
Sbjct: 59 LMSESSDLS--VWFFKELRDIYAFRHSSFSTLLVSHVLAGQRRFKELQVI--LEQLLQEE 114
Query: 328 KSRTKIKDPE-VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
+ K + V+ L+ + +++ +L +++ MKD ++ V +V+ F R
Sbjct: 115 GTFRKWESTGLVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHF---RE 171
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
Y+++ + + TY++V++ CR + A E K VV+++S
Sbjct: 172 TDKMWDVYKEI----KDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNS 227
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
++ Y + G + A + + G P+V+ +N LI+ ++ + +L ++M +
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
V PD V+Y + + G E+ + G D I++ ++G ID +
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 567 KLLQDMKMEGTRLD 580
LL+DM G L+
Sbjct: 348 VLLKDMLSRGFELN 361
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 100/233 (42%), Gaps = 1/233 (0%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++++G+ K A + ++ G P ++ +IN C + +A ++ +M +
Sbjct: 227 SIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G + V Y+ + + G + A +++ M ++G P+V Y L+ + N+
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMG 346
Query: 496 EKLWNEMKRRKVAPDKVSYTS-MIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
L +M R + + S M+ K G + LFN+ + +G D I++
Sbjct: 347 LVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH 406
Query: 555 VFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESF 607
K+G+ D + L +M + + R + + + G+ L+A+ L +S
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 103/216 (47%), Gaps = 4/216 (1%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++ F S A + + K++ + P +Y +I +CR Q N A ++ ++M KG
Sbjct: 196 LMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
F ++Y++++ R +LR A KL+ +MK +GC P++ YN++I RE
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
K+ ++M +P+ VSY ++IG G F+ + E G +++ +V F
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
G++++ +++ + G + L+ W I
Sbjct: 376 CSFGKVEEACDVVEVVMKNG----ETLHSDTWEMVI 407
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 1/204 (0%)
Query: 399 SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI-VMYGRSGRL 457
S GY + +I Y K F +M + F + ++ V+ G L
Sbjct: 112 SSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYL 171
Query: 458 RNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSM 517
+ A +L + G PN YN L+ +L +L+ +M R V PD SY +
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKIL 231
Query: 518 IGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
I + + G+ EL ++ G V DR ++ + Q+ + KLL MK++G
Sbjct: 232 IQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGC 291
Query: 578 RLDQRLYQSAWNAFIEAGLQLQAK 601
D Y + F + A+
Sbjct: 292 NPDLVHYNTMILGFCREDRAMDAR 315
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/403 (20%), Positives = 160/403 (39%), Gaps = 63/403 (15%)
Query: 83 SNP----GTENLNEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFK 138
SNP G+ + L DP + FDY + +P FR +S+ +I L R +
Sbjct: 42 SNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQ---QPNFRHSRSSHLILILKLGRGR 98
Query: 139 KWDFILSVSEDFKIYHVLPDGATCSKLIEFCIR-QRKFKIAETLLNAFKSDSEVAVFAFG 197
++ I +D H ++ + I+ + K+ E +L+ F E F F
Sbjct: 99 YFNLI----DDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLE---FNFT 151
Query: 198 SALRNYNKL--------HMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVK 249
++ N++ ++ +F+ + + V+ ++R Y+ +M+A+ DD +
Sbjct: 152 PQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQ 211
Query: 250 LFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLI 308
LF + R++ Y +L + + G+V+ A+E M KG + Y+TL+
Sbjct: 212 LFGKMLERDVVPDV----DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLL 267
Query: 309 CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK 368
S ++ E +LL K + D Y +++ + ED AM
Sbjct: 268 NSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRED---------RAMD----- 313
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
A + + ++S G P V+Y ++I C +++ +K
Sbjct: 314 ---------------------ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKY 352
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG 471
EEM KGF + ++ + G++ A +V + + G
Sbjct: 353 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/472 (18%), Positives = 202/472 (42%), Gaps = 31/472 (6%)
Query: 159 GATC------SKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRR 211
G TC +KL+ I + + + A ++ N + + ++ + + + + F
Sbjct: 313 GTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHS 372
Query: 212 TVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYG 271
+ + K++ N + D+ ++ I+ A S+ + + +K+F + + + + +
Sbjct: 373 LLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPT----ASTFN 428
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESS--VYSTLICSFASLHKVGEVEELLREAKS 329
L + GK G++ E+ +M + + + + + L+ ++ + K+ E ++ + +S
Sbjct: 429 TLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Query: 330 RTKIKDPEVYLKLVIMYVE-------EDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFS 382
D + L Y ED++ ++ +V+ C +VNG+
Sbjct: 489 YGVKPDVVTFNTLAKAYARIGSTCTAEDMI--IPRMLHNKVKPNVRTCG----TIVNGYC 542
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
+ A+R + ++ G P + S+I + ++ + +V + ME+ G VV
Sbjct: 543 EEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVV 602
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
+S+++ + G ++ ++ M E G P++ ++ L + R + E++ N+M
Sbjct: 603 TFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQM 662
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEY-RINGGVIDRAMAGIMVGVFSKVGQ 561
++ V P+ V YT +I + AGE + +++ + I G + ++ F + Q
Sbjct: 663 RKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQ 722
Query: 562 IDQLVKLLQDMKMEG---TRLDQRLYQSAWNAFIEAGLQLQAKWLQESFHVS 610
+ +LL+DM+ + TR +L W + I A L SF S
Sbjct: 723 PWKAEELLKDMEGKNVVPTRKTMQLIADGWKS-IGVSNSNDANTLGSSFSTS 773
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 141/331 (42%), Gaps = 70/331 (21%)
Query: 332 KIKDPEVYLKLVIMYVEEDLL--------------EKTLEVVEAM-KDAD-----VKVCD 371
+I DP ++ I + ED+ E L VEA+ KD++ ++
Sbjct: 247 RILDPNPMTRITIPEILEDVWFKKDYKPAVFEEKKEANLADVEAVFKDSEEGRVQLRSFP 306
Query: 372 CMLCA-------------VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCR 418
C++C+ ++NG +R A + LI +G++P +TY +++ A R
Sbjct: 307 CVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTR 366
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
++ + ++E+ G + ++++I SG L AMK+ KMKE GCKP
Sbjct: 367 QKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTAST 426
Query: 479 YNSLI----------------DMHGREK-----------------NLRQLEKLWN---EM 502
+N+LI DM R++ N R++E+ WN +M
Sbjct: 427 FNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKM 486
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRA-MAGIMVGVFSKVGQ 561
+ V PD V++ ++ AY++ G T ++ ++ V G +V + + G+
Sbjct: 487 QSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGK 546
Query: 562 IDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
+++ ++ MK G + ++ S F+
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFL 577
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/372 (19%), Positives = 145/372 (38%), Gaps = 76/372 (20%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVF 216
P+ TC+ L++ QRK + A +N ++
Sbjct: 458 PNDRTCNILVQAWCNQRKIEEA------------------------WNIVY--------- 484
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDD-CESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
K++S V D ++ + +AY+++ C + + ++ + R G I CE
Sbjct: 485 -KMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCE 543
Query: 276 SLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIK 334
G++ EAL +F M + G+ + V+++LI F +++ + V
Sbjct: 544 E----GKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVG------------- 586
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
EVV+ M++ VK ++N +S Y
Sbjct: 587 ----------------------EVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIY 624
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
++ G +P ++ + Y R + KAE++ +M + G VV Y+ +I + +
Sbjct: 625 TDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSA 684
Query: 455 GRLRNAMKLVAKM-KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
G ++ AM++ KM G PN+ Y +LI G K + E+L +M+ + V P + +
Sbjct: 685 GEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKT 744
Query: 514 YTSMIGAYSKAG 525
+ + G
Sbjct: 745 MQLIADGWKSIG 756
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 151/303 (49%), Gaps = 8/303 (2%)
Query: 299 FESSVYSTLICSFA--SLH-KVGEVEELLRE-AKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
F+ S++ L+ F+ LH KV E+ L++ A+ + + L L+I E +L K
Sbjct: 122 FQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRK 181
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE-PGQVTYASVI 413
L + A + ++ C+ +V K + A E++ G P +TY++++
Sbjct: 182 LL--LYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM 239
Query: 414 NAYCRLSQYNKAEKVFEEM-EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
+ S+ +A ++FE+M ++G V ++ MI + R+G + A K++ MK+ GC
Sbjct: 240 DCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC 299
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
PNV+ Y++L++ + +++ ++ ++E+K+ + D V YT+++ + + GE + +
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
L E + + D +++ S G+ ++ +++L EG L++ Y+ NA
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 593 EAG 595
G
Sbjct: 420 CNG 422
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 101/204 (49%), Gaps = 5/204 (2%)
Query: 390 AVRAYEKLIS-QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
AV +E +IS +G P VT+ +IN +CR + +A+K+ + M++ G + V YS+++
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALM 310
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
+ + G+++ A + ++K+ G K + Y +L++ R + KL EMK +
Sbjct: 311 NGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCR 370
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
D ++Y ++ S G E ++ +++ G +++ I++ G++++ VK
Sbjct: 371 ADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKF 430
Query: 569 LQDMKMEGTRLDQRLYQSAWNAFI 592
L M G + + WN +
Sbjct: 431 LSVMSERGI----WPHHATWNELV 450
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 163/381 (42%), Gaps = 18/381 (4%)
Query: 158 DGATCSKLIEFCIRQRKFKIAETLLNAFKSDS-EVAVFAFGSALRNYNKLHMFRRTVLVF 216
+ AT S L++ +R +KF + +L+ K ++ F + +R++++ + + + +F
Sbjct: 88 NNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMF 147
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQ-----IYG 271
++ + V S + I + L D V + L +K LG I+
Sbjct: 148 NLIQVIARVKPS--LNAISTCLNLLIDSGEV-----NLSRKLLLYAKHNLGLQPNTCIFN 200
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIF--ESSVYSTLI-CSFASLHKVGEVEELLREAK 328
+L + K G ++ A M + GI S YSTL+ C FA + E EL +
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAH-SRSKEAVELFEDMI 259
Query: 329 SRTKIK-DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
S+ I DP + ++ + +E+ ++++ MK A++NGF K
Sbjct: 260 SKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKI 319
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A + ++++ G + V Y +++N +CR + ++A K+ EM+ + Y+ +
Sbjct: 320 QEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVI 379
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
+ GR A++++ + G N Y +++ L + K + M R +
Sbjct: 380 LRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGI 439
Query: 508 APDKVSYTSMIGAYSKAGEFE 528
P ++ ++ ++G E
Sbjct: 440 WPHHATWNELVVRLCESGYTE 460
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 76/162 (46%), Gaps = 3/162 (1%)
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKER-GCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
A S+ + + SG + + KL+ K G +PN ++N L+ H + ++ + E
Sbjct: 162 AISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEE 221
Query: 502 MKRRKVA-PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV-IDRAMAGIMVGVFSKV 559
MKR ++ P+ ++Y++++ + ELF + G+ D +M+ F +
Sbjct: 222 MKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRA 281
Query: 560 GQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
G++++ K+L MK G + Y + N F + G +AK
Sbjct: 282 GEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAK 323
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 147/332 (44%), Gaps = 11/332 (3%)
Query: 213 VLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGV 272
L+ E K + +++S+ ++ Y + D + FH ++ L +
Sbjct: 182 TLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSA 241
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFAS-LHKVGEVEELLREAKSRT 331
LC + VS+A K F++ ++ ++ + + + E E + E +
Sbjct: 242 LC----RYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVG 297
Query: 332 KIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAV 391
D Y ++ Y + L K L++ + MK ++ + AVV+ +K F +
Sbjct: 298 VKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKA-SFVSEA 356
Query: 392 RAYEKLISQ--GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
R K + + G EP VTY S+I C+ + +A++VF+EM +KG + Y + +
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
+ R+G +L+AKM++ GC+P V Y LI R ++ + LW+EMK + V P
Sbjct: 417 IL-RTGE--EVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGP 473
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
D SY MI G+ E + E + G
Sbjct: 474 DLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKG 505
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 27/217 (12%)
Query: 383 KRRGFSAAVRAYEKLIS------------------QGYEPGQV---TYASVINAYCRLSQ 421
K++G+ +VR Y +IS + + P V T +I YC +
Sbjct: 153 KQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHD 212
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER---GCKPNVWV 478
KA F ++ + + + S++ R + +A L+ K++ K V
Sbjct: 213 VGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIV 272
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYR 538
N ++ G + R+ E++W EM V D VSY+SMI YSK G +LF+ +
Sbjct: 273 LNGWCNVIG---SPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK 329
Query: 539 INGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
DR + +V +K + + L++ M+ E
Sbjct: 330 KECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEE 366
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/434 (20%), Positives = 171/434 (39%), Gaps = 52/434 (11%)
Query: 151 KIYHVLPDGA------TCSKLIEFCIRQRKFKIAETLLNAFKSDSEVA--VFAFGSALRN 202
+I+ +PD + + L+ I+ ++F + + K + +F ++
Sbjct: 141 RIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKA 200
Query: 203 YNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDS 262
K + V +++ S +V + Y+ I+ Y D ES ++ E R
Sbjct: 201 LCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPD 260
Query: 263 KRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVE 321
Y VL + K GR SEA M K I + V Y +I + K GE
Sbjct: 261 ----ATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEAR 316
Query: 322 ELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGF 381
+ E R+ + D + C V++
Sbjct: 317 NMFDEMLERSFMPD-----------------------------------SSLCCKVIDAL 341
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
+ A + K++ P +++I+ C+ + +A K+F+E E KG +
Sbjct: 342 CEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSL 400
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
+ Y+++I G L A +L M ER CKPN + YN LI+ + N+++ ++ E
Sbjct: 401 LTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEE 460
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
M P+K ++ + K G+ E ++ + +NG V D+ + + F+ G+
Sbjct: 461 MLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKESWELFLKKFA--GE 517
Query: 562 IDQLVKLLQDMKME 575
+D+ V L+++ E
Sbjct: 518 LDKGVLPLKELLHE 531
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/429 (18%), Positives = 179/429 (41%), Gaps = 17/429 (3%)
Query: 171 RQRKFKIAETLLNAFKSDS---EVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLD 227
R R F E+L+ ++ + F LRNY + ++ +F ++ V
Sbjct: 95 RARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRS 154
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIY--GVLCESLGKCGRVSE 285
R + ++ + + V +F +N ++S I+ +L ++L K +
Sbjct: 155 VRSLNTLLNVLIQNQRFDLVHAMF-----KNSKESFGITPNIFTCNLLVKALCKKNDIES 209
Query: 286 ALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVI 344
A + + G+ + V Y+T++ + + + + +L E R D Y L+
Sbjct: 210 AYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMD 269
Query: 345 MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEP 404
Y + + V++ M+ +++ + ++ K + A +++++ + + P
Sbjct: 270 GYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMP 329
Query: 405 GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLV 464
VI+A C + ++A ++ +M + S++I + GR+ A KL
Sbjct: 330 DSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
+ E+G P++ YN+LI + L + +LW++M RK P+ +Y +I SK
Sbjct: 390 DEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKN 448
Query: 525 GEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
G + + E G ++ I+ K+G+ + +K++ M G ++
Sbjct: 449 GNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG-----KVD 503
Query: 585 QSAWNAFIE 593
+ +W F++
Sbjct: 504 KESWELFLK 512
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 95/210 (45%)
Query: 399 SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLR 458
S G P T ++ A C+ + A KV +E+ G +V Y++++ Y G +
Sbjct: 184 SFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDME 243
Query: 459 NAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
+A +++ +M +RG P+ Y L+D + + + + ++M++ ++ P++V+Y MI
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
A K + +F+E + D ++ ++ + ++D+ L + M
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 363
Query: 579 LDQRLYQSAWNAFIEAGLQLQAKWLQESFH 608
D L + + + G +A+ L + F
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEFE 393
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 150/330 (45%), Gaps = 12/330 (3%)
Query: 203 YNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDS 262
Y K + +LVFEK++ + LD+ Y+ ++ + + ++ + E + +
Sbjct: 234 YGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFG 293
Query: 263 KRYLGQIYGVLCESLGKCGRV----SEALEYFRVMTKKGIFESSVYSTLICSFASLHKVG 318
R Y +L + + K +V S A + R+ I E + L+ SF K+
Sbjct: 294 LR----TYKMLLDCIAKSEKVDVVQSIADDMVRICE---ISEHDAFGYLLKSFCVSGKIK 346
Query: 319 EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVV 378
E EL+RE K++ D + + LV + + LE+V+ MK + + + ++
Sbjct: 347 EALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSN-VYGIII 405
Query: 379 NGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFD 438
+G+ ++ S A+ +E + G P TY ++ +L Q+ K +F EM + G +
Sbjct: 406 SGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIE 465
Query: 439 KCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKL 498
VA ++++ + R+ A K+ + M+E+G KP Y+ + R ++ K+
Sbjct: 466 PDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKI 525
Query: 499 WNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
+N+M K+ ++ +I + K GE E
Sbjct: 526 FNQMHASKIVIRDDIFSWVISSMEKNGEKE 555
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 148/353 (41%), Gaps = 20/353 (5%)
Query: 183 NAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLD 242
N +K +SE A+ +++ F++ +F +++ ++ ++ ++ Y +
Sbjct: 672 NGYKHNSE----AYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTG 727
Query: 243 DCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS 302
++ F E + L S + VLCE G+ V EA FR M + G
Sbjct: 728 LTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGR--NVEEATRTFREMIRSGFVPDR 785
Query: 303 --VYSTLICSFASLHKVGEVEELLREAKSRTKIKDP-----EVYLKLVIMYVEEDLLEKT 355
V L C L +VG ++ S KI P +Y++ + + LE+
Sbjct: 786 ELVQDYLGC----LCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGK---LEEA 838
Query: 356 LEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINA 415
L + + + + ++V+G +R A+ + G +PG Y S+I
Sbjct: 839 LSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVY 898
Query: 416 YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN 475
+ + Q K + ++ME + + VV Y++MI Y G++ A M+ERG P+
Sbjct: 899 FFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPD 958
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
Y+ I+ + KL +EM + +AP +++ ++ ++ G+ +
Sbjct: 959 FKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHD 1011
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 145/384 (37%), Gaps = 64/384 (16%)
Query: 213 VLVFEKLKSNSV------VLDSRGYSHIMEAYS---KLDDCESVVK----LFHEFESRNL 259
VL K++ N+V V GY H EAY+ K+ C K LF+E +
Sbjct: 650 VLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGC 709
Query: 260 RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASL----- 314
++ + ++ G+ G + A+ F+ M G+ SS ST C L
Sbjct: 710 LITQ----DTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSS--STFKCLITVLCEKKG 763
Query: 315 HKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCML 374
V E RE + D E+ +D L EV D K C L
Sbjct: 764 RNVEEATRTFREMIRSGFVPDRELV---------QDYLGCLCEVGNT---KDAKSCLDSL 811
Query: 375 CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKA--EKVFEEM 432
+ GF P V Y+ I A CR+ + +A E E
Sbjct: 812 GKI--------GF----------------PVTVAYSIYIRALCRIGKLEEALSELASFEG 847
Query: 433 EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL 492
E+ D+ Y S++ + G L+ A+ V MKE G KP V VY SLI +EK L
Sbjct: 848 ERSLLDQ--YTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQL 905
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
++ + +M+ P V+YT+MI Y G+ E F G D
Sbjct: 906 EKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKF 965
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEG 576
+ + + + +KLL +M +G
Sbjct: 966 INCLCQACKSEDALKLLSEMLDKG 989
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/304 (19%), Positives = 138/304 (45%), Gaps = 4/304 (1%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAK 328
Y ++ SL GR ALE+++ M +KGI F Y L+ A KV V+ + +
Sbjct: 262 YNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMV 321
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
+I + + + L+ + +++ LE++ +K+ ++ + +V G +
Sbjct: 322 RICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMV 381
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A+ + + + + V Y +I+ Y R + +KA + FE +++ G V Y+ ++
Sbjct: 382 DALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIM 440
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
+ + L +M E G +P+ +++ H + + + K+++ M+ + +
Sbjct: 441 QHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIK 500
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQ--LV 566
P SY+ + ++ ++ ++FN+ + VI + ++ K G+ ++ L+
Sbjct: 501 PTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLI 560
Query: 567 KLLQ 570
K +Q
Sbjct: 561 KEIQ 564
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/460 (19%), Positives = 183/460 (39%), Gaps = 67/460 (14%)
Query: 186 KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCE 245
KS V + +++ KL F + +F ++ N + DS + ++ + +
Sbjct: 426 KSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVA 485
Query: 246 SVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVM-TKKGIFESSVY 304
K+F E + ++ + + Y + + L + R E ++ F M K + ++
Sbjct: 486 EAWKVFSSMEEKGIKPTWKS----YSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIF 541
Query: 305 STLICSFASLHKVGEVEE--LLREAKSRTKIKDPEVY----------LKLVIMY-----V 347
S +I +S+ K GE E+ L++E + R+ E+ +LV Y V
Sbjct: 542 SWVI---SSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKAEFSQEEELVDDYNCPQLV 598
Query: 348 EEDLLEKTLEVV----------------------EAMKDADVK-----VCDCMLCAVVNG 380
++ L L V EA++ + V+ V + + A + G
Sbjct: 599 QQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQG 658
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+ R FS + GY+ Y I + + +F EM ++G C
Sbjct: 659 NAVLRFFSWVGK------RNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQG---C 709
Query: 441 VVA---YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDM--HGREKNLRQL 495
++ ++ MI+ YGR+G A++ +MK+ G P+ + LI + + +N+ +
Sbjct: 710 LITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEA 769
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
+ + EM R PD+ +G + G + + G + A + I +
Sbjct: 770 TRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYS-IYIRA 828
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
++G++++ + L + E + LDQ Y S + ++ G
Sbjct: 829 LCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRG 868
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 425 AEKVFEEMEQK-GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
A + F ++QK GF V Y++M+ + G + L +LV++M++ GC ++ + LI
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
++G+ K + + ++ +M++ D +Y MI + AG + E + E G
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 291
Query: 544 IDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
+++ +K ++D + + DM
Sbjct: 292 FGLRTYKMLLDCIAKSEKVDVVQSIADDM 320
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 171/420 (40%), Gaps = 29/420 (6%)
Query: 196 FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFE 255
+G + Y + + + + FE +K + Y+ IM+ KL E LF+E
Sbjct: 401 YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI 460
Query: 256 SRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASL 314
+ I V+ LG+ RV+EA + F M +KGI + YS +
Sbjct: 461 ENGIEPDSV---AITAVVAGHLGQ-NRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRS 516
Query: 315 HKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCML 374
+ E+ ++ + + +KI + VI +E++ ++ + +++ ++ CD
Sbjct: 517 SRYDEIIKIFNQMHA-SKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCD--- 572
Query: 375 CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAE--KVFE-- 430
+NG K A E+L+ P V +++ A + + + E +V
Sbjct: 573 --ELNGSGK-----AEFSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSS 625
Query: 431 ---EMEQKGFDKCVVAYS-SMIVMYGRSGRLRN--AMKLVAKMKER-GCKPNVWVYNSLI 483
E Q+ +K V ++ ++V R +++ ++ + + +R G K N YN I
Sbjct: 626 RDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSI 685
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
+ G K+ +Q+ L+ EM+R+ + ++ MI Y + G F E + G +
Sbjct: 686 KVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLI 745
Query: 544 IDRAMAGIMVGVF--SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
+ ++ V K +++ + ++M G D+ L Q E G AK
Sbjct: 746 PSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAK 805
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 112/269 (41%), Gaps = 40/269 (14%)
Query: 280 CGRVSEAL---EYFRVMTKKGIFESSVYSTLICS---FASLHKVGEVEELLREAKSRTKI 333
C V +AL ++ R M K FE T C +SL + G VEE+ R
Sbjct: 90 CNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKR-------- 141
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+Y E ++E + D+ + +VNG+ K G+ +
Sbjct: 142 -----------LYTE---------MLEDLVSPDIYTFN----TLVNGYCKL-GYVVEAKQ 176
Query: 394 YEK-LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
Y LI G +P TY S I +CR + + A KVF+EM Q G + V+Y+ +I
Sbjct: 177 YVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF 236
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
+ ++ A+ L+ KMK+ C PNV Y LID + L+ +M + PD
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296
Query: 513 SYTSMIGAYSKAGEFETCTELFNEYRING 541
YT +I ++ + + L NG
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENG 325
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 93/220 (42%), Gaps = 4/220 (1%)
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
R Y +++ P T+ +++N YC+L +A++ + Q G D Y+S I +
Sbjct: 141 RLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGH 200
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
R + A K+ +M + GC N Y LI K + + L +MK P+
Sbjct: 201 CRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNV 260
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQD 571
+YT +I A +G+ LF + +G D M +++ F +D+ LL+
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 572 MKMEGTRLDQRLYQSAWNAF----IEAGLQLQAKWLQESF 607
M G + Y + F + + L +K L+++
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQNL 360
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 145/330 (43%), Gaps = 39/330 (11%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAK 328
++ VL ES GK G V E+++ F+ M G+ + I S+ SL KV +LR +
Sbjct: 187 MFVVLIESYGKAGIVQESVKIFQKMKDLGVERT------IKSYNSLFKV-----ILRRGR 235
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
M + + E VE + + ML GF
Sbjct: 236 ---------------YMMAKRYFNKMVSEGVEPTR----HTYNLMLW----GFFLSLRLE 272
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
A+R +E + ++G P T+ ++IN +CR + ++AEK+F EM+ VV+Y++MI
Sbjct: 273 TALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
Y R+ + +++ +M+ G +PN Y++L+ + + + + M + +A
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA 392
Query: 509 P-DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
P D + ++ + SKAG+ TE+ + G+++ K ++ +K
Sbjct: 393 PKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIK 452
Query: 568 LLQDMKMEGTRLDQR----LYQSAWNAFIE 593
LL + + L + + SA+N IE
Sbjct: 453 LLDTLIEKEIILRHQDTLEMEPSAYNPIIE 482
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 98/207 (47%)
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
D + ++K++ M E L ++ M + V + M ++ + K +V+ +
Sbjct: 149 DRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIF 208
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+K+ G E +Y S+ R +Y A++ F +M +G + Y+ M+ + S
Sbjct: 209 QKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLS 268
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
RL A++ MK RG P+ +N++I+ R K + + EKL+ EMK K+ P VSY
Sbjct: 269 LRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSY 328
Query: 515 TSMIGAYSKAGEFETCTELFNEYRING 541
T+MI Y + +F E R +G
Sbjct: 329 TTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 78/166 (46%)
Query: 408 TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
T+ +I +S+ N A + +M +KG + +I YG++G ++ ++K+ KM
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
K+ G + + YNSL + R ++ +N+M V P + +Y M+ + +
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRL 271
Query: 528 ETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
ET F + + G D A M+ F + ++D+ KL +MK
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMK 317
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/396 (19%), Positives = 155/396 (39%), Gaps = 54/396 (13%)
Query: 200 LRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNL 259
+ +Y K + + +V +F+K+K V + Y+ + + + + F++ S +
Sbjct: 192 IESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGV 251
Query: 260 RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVG 318
++ Y ++ R+ AL +F M +GI + + ++T+I F K+
Sbjct: 252 EPTR----HTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 319 EVEELLREAKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDADVK-------- 368
E E+L E K KI P V Y ++ Y+ D ++ L + E M+ + ++
Sbjct: 308 EAEKLFVEMKG-NKI-GPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 369 ----VCDC------------------------MLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
+CD + ++ SK +AA + + +
Sbjct: 366 LLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATL 425
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEM--------EQKGFDKCVVAYSSMIVMYG 452
Y +I C+ S YN+A K+ + + Q + AY+ +I
Sbjct: 426 NVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLC 485
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
+G+ A L ++ +RG + + N+LI H +E N ++ M RR V +
Sbjct: 486 NNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESN 544
Query: 513 SYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAM 548
+Y +I +Y GE + +G V D ++
Sbjct: 545 AYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSL 580
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 85/466 (18%), Positives = 161/466 (34%), Gaps = 112/466 (24%)
Query: 132 RYLMRFKKWDFILSVS--------EDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLN 183
R+ W F LS+ ED K + PD AT + +I R +K AE L
Sbjct: 255 RHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKL-- 312
Query: 184 AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDD 243
F ++K N + Y+ +++ Y +D
Sbjct: 313 --------------------------------FVEMKGNKIGPSVVSYTTMIKGYLAVDR 340
Query: 244 CESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV 303
+ +++F E S + + Y L L G++ EA + M K I
Sbjct: 341 VDDGLRIFEEMRSSGIEPN----ATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAP--- 393
Query: 304 YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK 363
KD ++LKL++ + + EV++AM
Sbjct: 394 ------------------------------KDNSIFLKLLVSQSKAGDMAAATEVLKAMA 423
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ----------GYEPGQVTYASVI 413
+V ++ K ++ A++ + LI + EP Y +I
Sbjct: 424 TLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPII 481
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
C Q KAE +F ++ ++G + A +++I + + G ++ +++ M RG
Sbjct: 482 EYLCNNGQTAKAEVLFRQLMKRGV-QDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVP 540
Query: 474 PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTEL 533
Y LI + + + + M PD + S+I + + G +T + +
Sbjct: 541 RESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRV 600
Query: 534 FNEYRINGGVIDRAMAGIMVGVFSKVG---QIDQLVKLLQDMKMEG 576
+M+ + VG +D + K+L+ + M G
Sbjct: 601 -----------------MMIMIDKNVGIEDNMDLIAKILEALLMRG 629
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 114/230 (49%), Gaps = 5/230 (2%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++ G+SK + ++K+ ++G +Y+ ++ C+ + KA K+++EM+ +
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
VVAY+++I G S + +++ +M+ERGC+PNV +N++I + + +R
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV-GV 555
++ +EM +R PD ++Y + K E LF I GV + +M+
Sbjct: 315 RMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRM-IRSGVRPKMDTYVMLMRK 370
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQE 605
F + G + ++ + + MK G D Y + +A I+ G+ A+ +E
Sbjct: 371 FERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEE 420
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/400 (19%), Positives = 156/400 (39%), Gaps = 66/400 (16%)
Query: 161 TCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAV--FAFGSALRNYNKLHMFRRTVLVFEK 218
T +++I+ + +F+I+ L+N ++E F + Y H+ + + ++K
Sbjct: 83 TFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDK 142
Query: 219 LKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLG--------QIY 270
L ++ D + ++++A CE H E+ L K +G +I+
Sbjct: 143 LDDFNL-RDETSFYNLVDAL-----CEHK----HVVEAEELCFGKNVIGNGFSVSNTKIH 192
Query: 271 GVLCESLGKCGRVSEALEYFRVMTKKGI----FESSVYSTLICSFASLHKVGEVEELLRE 326
++ K G + EY++ M +G+ F S+Y ++C K + +L +E
Sbjct: 193 NLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSG---KPWKAVKLYKE 249
Query: 327 AKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
KSR D V+ Y V+ +G
Sbjct: 250 MKSRRMKLD-------VVAY----------------------------NTVIRAIGASQG 274
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
+R + ++ +G EP T+ ++I C + A ++ +EM ++G + Y
Sbjct: 275 VEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITY-- 332
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
+ ++ R + + L +M G +P + Y L+ R L+ + +W MK
Sbjct: 333 -MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDR 546
PD +Y ++I A + G + E + E I G+ R
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMARE-YEEEMIERGLSPR 430
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/379 (18%), Positives = 175/379 (46%), Gaps = 33/379 (8%)
Query: 161 TCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLK 220
T + ++ +R ++ IAE L F+ E V ++ + + Y + + + +F+++
Sbjct: 111 TWTAMVSGYLRSKQLSIAEML---FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 221 SNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKC 280
++V ++ +++A + + + LF R++ + + + L K
Sbjct: 168 ERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRRDVVS--------WTAMVDGLAKN 215
Query: 281 GRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
G+V EA F M ++ I ++ +I +A +++ E ++L + R D +
Sbjct: 216 GKVDEARRLFDCMPERNIIS---WNAMITGYAQNNRIDEADQLFQVMPER----DFASWN 268
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
++ ++ + K + + M + +V M + G+ + + A+ + K++
Sbjct: 269 TMITGFIRNREMNKACGLFDRMPEKNVISWTTM----ITGYVENKENEEALNVFSKMLRD 324
Query: 401 G-YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
G +P TY S+++A L+ + +++ + + + K + S+++ MY +SG L
Sbjct: 325 GSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIA 384
Query: 460 AMKLVAKMKERG--CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSM 517
A KM + G C+ ++ +NS+I ++ + ++ +++N+M++ P V+Y ++
Sbjct: 385 A----RKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNL 440
Query: 518 IGAYSKAGEFETCTELFNE 536
+ A S AG E E F +
Sbjct: 441 LFACSHAGLVEKGMEFFKD 459
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/399 (18%), Positives = 173/399 (43%), Gaps = 34/399 (8%)
Query: 146 VSEDFKIYHVLP--DGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNY 203
++E K++ LP D T + +I I+ + A L + + DS V + + + Y
Sbjct: 62 IAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD--RVDSRKNVVTWTAMVSGY 119
Query: 204 NKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSK 263
+ ++F+++ +VV ++ +++ Y++ + ++LF E RN+
Sbjct: 120 LRSKQLSIAEMLFQEMPERNVV----SWNTMIDGYAQSGRIDKALELFDEMPERNIVS-- 173
Query: 264 RYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEEL 323
+ + ++L + GR+ EA+ F M ++ + ++ ++ A KV E L
Sbjct: 174 ------WNSMVKALVQRGRIDEAMNLFERMPRRDVVS---WTAMVDGLAKNGKVDEARRL 224
Query: 324 LREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK 383
R I + ++ Y + + +++ ++ + M + D + M + GF +
Sbjct: 225 FDCMPERNIIS----WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTM----ITGFIR 276
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
R + A ++++ E +++ ++I Y + +A VF +M + G K V
Sbjct: 277 NREMNKACGLFDRM----PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVG 332
Query: 444 -YSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
Y S++ L ++ + + + N V ++L++M+ + L K+++
Sbjct: 333 TYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFD-- 390
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
D +S+ SMI Y+ G + E++N+ R +G
Sbjct: 391 NGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG 429
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 146/359 (40%), Gaps = 54/359 (15%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEV----EELLR 325
Y L + L V +AL F M K GI + V +I +L + G + ++LL
Sbjct: 194 YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNII--VHALCQKGVIGNNNKKLLE 251
Query: 326 EAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK----------DADVKVCDCM-- 373
E ++ P L +VI + D K VV+A++ AD V + +
Sbjct: 252 EILDSSQANAP---LDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR 308
Query: 374 -LCAVVN-----GFS---KRRGFSAAVRAYEKLISQ--------------------GYEP 404
LC+ N GF +RG + V Y LIS G P
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 405 GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLV 464
Q++Y +I C N+A + M + V+ ++ +I YGR G +A+ ++
Sbjct: 369 DQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVL 428
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW--NEMKRRKVAPDKVSYTSMIGAYS 522
M G KPNV+ N+LI HG K R ++ W NEM+ K+ PD +Y ++GA
Sbjct: 429 NLMLSYGVKPNVYTNNALI--HGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 523 KAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
G +L++E G D +V G++ + LL ++ G +D
Sbjct: 487 TLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDH 545
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 120/292 (41%), Gaps = 1/292 (0%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREA 327
I +L +S K G V +ALE ++ M++K + +S VY+ +I S + + +
Sbjct: 267 ICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM 326
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
R D Y L+ +E ++ ++ M++ V ++ G
Sbjct: 327 VKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDV 386
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
+ A ++ P + + VI+ Y R + A V M G V +++
Sbjct: 387 NRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNAL 446
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I Y + GRL +A + +M+ P+ YN L+ +LR +L++EM RR
Sbjct: 447 IHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGC 506
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKV 559
PD ++YT ++ G + L + + G ID I+ ++++
Sbjct: 507 QPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRL 558
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 110/306 (35%), Gaps = 41/306 (13%)
Query: 321 EELLREAKSRTKIKDPEVYLKLV--IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVV 378
E+ + K + +DPE ++ I+ D L E V K D C + +++
Sbjct: 69 EKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIM 128
Query: 379 NGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFD 438
+ AA+ +K+I G PG +T+ ++N C+ KA+ + EM + G
Sbjct: 129 RDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPS 188
Query: 439 KCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPN----------------------- 475
V+Y+++I + A+ L M + G +PN
Sbjct: 189 PNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKK 248
Query: 476 ----------------VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
+ + L+D + N+ Q ++W EM ++ V D V Y +I
Sbjct: 249 LLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIR 308
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
+G + G D ++ K G+ D+ L M+ G
Sbjct: 309 GLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAP 368
Query: 580 DQRLYQ 585
DQ Y+
Sbjct: 369 DQISYK 374
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 109/229 (47%), Gaps = 7/229 (3%)
Query: 371 DCM-LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
DC+ +++G+ A + + L+ G P T +I A R + AE VF
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
M+ +G VV Y++++ YG++ +L +L+ +M+ G P+V YN LI
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 490 KNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF---NEYRINGGVIDR 546
+ + ++ +E+ RR P +++T +IG +SK G+F+ L+ + R+ V+
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV-- 584
Query: 547 AMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ ++ G + K ++++ + L + G + D LY + + + G
Sbjct: 585 TCSALLHG-YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 149/355 (41%), Gaps = 29/355 (8%)
Query: 193 VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFH 252
+ AF + K + V KLK + DS S +++ + K+ E +KL H
Sbjct: 306 IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH 365
Query: 253 EFESRN------------------LRDSKRY-----LGQIYGVLCESL---GKC--GRVS 284
F R LR S + LG + +C + G C GR
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 285 EALEYFRVMTKKGIFESSVYST-LICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
+A +YF + K G S ST LI + + + + E + R K+ D Y L+
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
Y + L K E+++ M+ A + +++ R A +LI +G+
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P + + VI + + + +A ++ M VV S+++ Y ++ R+ A+ L
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
K+ + G KP+V +YN+LI + ++ + +L M +R + P++ ++ +++
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 128/301 (42%), Gaps = 8/301 (2%)
Query: 279 KCGRVSEALEY---FRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKD 335
K G+ EA++ FR+ + IF VYS+ + + S + + +E + D
Sbjct: 353 KVGKPEEAIKLIHSFRL--RPNIF---VYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYE 395
Y ++ Y +K + A+ + ++ S+ S A +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR 467
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
+ ++G + VTY ++++ Y + Q NK ++ +EM G V Y+ +I G
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
+ A ++++++ RG P+ + +I + + ++ LW M ++ PD V+ +
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 516 SMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
+++ Y KA E LFN+ G D + ++ + VG I++ +L+ M
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Query: 576 G 576
G
Sbjct: 648 G 648
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 109/229 (47%), Gaps = 7/229 (3%)
Query: 371 DCM-LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
DC+ +++G+ A + + L+ G P T +I A R + AE VF
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
M+ +G VV Y++++ YG++ +L +L+ +M+ G P+V YN LI
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVR 526
Query: 490 KNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF---NEYRINGGVIDR 546
+ + ++ +E+ RR P +++T +IG +SK G+F+ L+ + R+ V+
Sbjct: 527 GYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVV-- 584
Query: 547 AMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ ++ G + K ++++ + L + G + D LY + + + G
Sbjct: 585 TCSALLHG-YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVG 632
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 149/355 (41%), Gaps = 29/355 (8%)
Query: 193 VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFH 252
+ AF + K + V KLK + DS S +++ + K+ E +KL H
Sbjct: 306 IVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH 365
Query: 253 EFESRN------------------LRDSKRY-----LGQIYGVLCESL---GKC--GRVS 284
F R LR S + LG + +C + G C GR
Sbjct: 366 SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTD 425
Query: 285 EALEYFRVMTKKGIFESSVYST-LICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
+A +YF + K G S ST LI + + + + E + R K+ D Y L+
Sbjct: 426 KAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLM 485
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
Y + L K E+++ M+ A + +++ R A +LI +G+
Sbjct: 486 HGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFV 545
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P + + VI + + + +A ++ M VV S+++ Y ++ R+ A+ L
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
K+ + G KP+V +YN+LI + ++ + +L M +R + P++ ++ +++
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 128/301 (42%), Gaps = 8/301 (2%)
Query: 279 KCGRVSEALEY---FRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKD 335
K G+ EA++ FR+ + IF VYS+ + + S + + +E + D
Sbjct: 353 KVGKPEEAIKLIHSFRL--RPNIF---VYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYE 395
Y ++ Y +K + A+ + ++ S+ S A +
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR 467
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
+ ++G + VTY ++++ Y + Q NK ++ +EM G V Y+ +I G
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
+ A ++++++ RG P+ + +I + + ++ LW M ++ PD V+ +
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 516 SMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
+++ Y KA E LFN+ G D + ++ + VG I++ +L+ M
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Query: 576 G 576
G
Sbjct: 648 G 648
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 101/479 (21%), Positives = 202/479 (42%), Gaps = 41/479 (8%)
Query: 156 LPDGATCSKLIEFCIR-----QRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFR 210
LPD ++C+ ++ R + K I + +++ D E+ + +A+R Y K M
Sbjct: 499 LPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIEL----YKTAMRVYCKEGMVA 554
Query: 211 RTVLVFEKLKSNSVVLDSRGYSHIMEAY---SKLDDCESVVKLFH------------EFE 255
+ K+ + V D+R + E+ +K D E+V+ + +
Sbjct: 555 EAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLK 614
Query: 256 SRNLRDSKRYLGQIYGV---------LCESLGKCGRVSEALEYFRVMTKKGI-FESSVYS 305
NL ++K L ++ + S + G VS+A ++ + G+ E +
Sbjct: 615 EGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIA 674
Query: 306 TLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA 365
TLI + HK+ E + L A +K V ++ YV LE + M+ A
Sbjct: 675 TLIAVYGRQHKLKEAKRLYL-AAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLF--MESA 731
Query: 366 DVKVCD---CMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
+ K CD + +VN + R A + + E V Y ++I A +
Sbjct: 732 E-KGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKL 790
Query: 423 NKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL 482
A +++E M G + Y++MI +YGR +L A+++ + + G + +Y ++
Sbjct: 791 QCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNM 850
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG 542
I +G+ + + L++EM+++ + P SY M+ + + EL NG
Sbjct: 851 IMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGR 910
Query: 543 VIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
D + ++ V+++ Q + K + +K +G L + S +A ++AG+ +A+
Sbjct: 911 CTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAE 969
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 98/544 (18%), Positives = 214/544 (39%), Gaps = 77/544 (14%)
Query: 120 FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAE 179
F PE+ T VI ++ W+ + + ED + ++P TC+ ++ + + A
Sbjct: 324 FVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKAL 383
Query: 180 TLL-----NAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHI 234
+L N +D + G +R Y KL +F +FE+ + +++ D + Y +
Sbjct: 384 SLFADMERNKIPADEVIR----GLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAM 439
Query: 235 MEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMT 294
+ + + + + ++R++ S+ Y V+ + K V A E FR ++
Sbjct: 440 SQVHLNSGNVVKALDVIEMMKTRDIPLSRF----AYIVMLQCYAKIQNVDCAEEAFRALS 495
Query: 295 KKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
K G+ ++S + ++ + L+ + + +++ D E+Y + +Y +E ++ +
Sbjct: 496 KTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAE 555
Query: 355 TLEVVEAM------KD-----------------------ADVKVCDCMLCAVVNGFSKRR 385
+++ M KD +V D M ++ +
Sbjct: 556 AQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKE 615
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFE-------EMEQKGFD 438
G +A L+ + + G VI+++ R +KAE + + ME++
Sbjct: 616 GNLNETKAILNLMFKT-DLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIA 674
Query: 439 KCVVAYS---------------------------SMIVMYGRSGRLRNAMKLVAKMKERG 471
+ Y SMI Y R G L +A L + E+G
Sbjct: 675 TLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKG 734
Query: 472 CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
C P + L++ R+ E + + + D V Y ++I A +AG+ + +
Sbjct: 735 CDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCAS 794
Query: 532 ELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
E++ +G M+ V+ + Q+D+ +++ + + G LD+++Y + +
Sbjct: 795 EIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHY 854
Query: 592 IEAG 595
+ G
Sbjct: 855 GKGG 858
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 145/334 (43%), Gaps = 2/334 (0%)
Query: 271 GVLCESLGKCGRVSEALEYFR-VMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKS 329
G + + + GR S L +++ V ++ + +SVY+ ++ S G+V +L E
Sbjct: 227 GTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVE 286
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
+ Y +V Y ++ E+ L+ MK + +V++ K +
Sbjct: 287 EGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEK 346
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
A+ YE + SQG P T A++++ Y + Y KA +F +ME+ V +I
Sbjct: 347 AIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIR 406
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
+YG+ G +A + + + + Y ++ +H N+ + + MK R +
Sbjct: 407 IYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPL 466
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
+ +Y M+ Y+K + E F G+ D + M+ +++++ ++ +
Sbjct: 467 SRFAYIVMLQCYAKIQNVDCAEEAFRALS-KTGLPDASSCNDMLNLYTRLNLGEKAKGFI 525
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+ + ++ D LY++A + + G+ +A+ L
Sbjct: 526 KQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDL 559
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
Y P V Y V+ Y ++ + AE+ F EM + G + VA +M+ Y R GR +
Sbjct: 184 YRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAML 243
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
++ER + VYN ++ ++ ++ LW EM V P++ +YT ++ +Y
Sbjct: 244 TFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSY 303
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
+K G E + F E + G V + ++ + K G ++ + L +DM+ +G
Sbjct: 304 AKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQG 358
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 108/263 (41%), Gaps = 31/263 (11%)
Query: 353 EKTLEVVEAMKDADVKVCDCMLCA-------------------------------VVNGF 381
E LE++E + D C MLC +++
Sbjct: 209 ETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSL 268
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
K+ + + +++ +G P + TY V+++Y + +A K F EM+ GF
Sbjct: 269 QKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEE 328
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
V YSS+I + ++G A+ L M+ +G P+ + +++ ++ + +N + L+ +
Sbjct: 329 VTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFAD 388
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
M+R K+ D+V +I Y K G F +F E + D M V G
Sbjct: 389 MERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGN 448
Query: 562 IDQLVKLLQDMKMEGTRLDQRLY 584
+ + + +++ MK L + Y
Sbjct: 449 VVKALDVIEMMKTRDIPLSRFAY 471
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/292 (19%), Positives = 131/292 (44%), Gaps = 3/292 (1%)
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSR 330
+L +L G+ EA R +K I ++ Y+TLI + K+ E+ +
Sbjct: 744 ILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTS 803
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA 390
+ Y ++ +Y L+K +E+ + + + + + + ++ + K S A
Sbjct: 804 GVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEA 863
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
+ + ++ +G +PG +Y ++ +++ +++ + ME+ G + Y ++I +
Sbjct: 864 LSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQV 923
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
Y S + A K + +KE+G + ++SL+ + + + E+ + +M ++PD
Sbjct: 924 YAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPD 983
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGV-IDRAMAGIMVGVFSKVGQ 561
+++ Y G+ E LF E I V DR ++ ++ ++ VG+
Sbjct: 984 SACKRTILKGYMTCGDAEKGI-LFYEKMIRSSVEDDRFVSSVVEDLYKAVGK 1034
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/391 (19%), Positives = 176/391 (45%), Gaps = 14/391 (3%)
Query: 185 FKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDC 244
F S E +F + + + Y++ + +R +F + + V+ D + I++ + D
Sbjct: 138 FDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDV 197
Query: 245 ESVVKLFHEFESR-NLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV 303
E+ K+ H + + R I V KCG + A ++FR M ++ +
Sbjct: 198 EAG-KVIHSVVIKLGMSSCLRVSNSILAVY----AKCGELDFATKFFRRMRERDVI---A 249
Query: 304 YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK 363
+++++ ++ K E EL++E + + L+ Y + + +++++ M+
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKME 309
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYN 423
+ A+++G A+ + K+ G P VT S ++A L N
Sbjct: 310 TFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVIN 369
Query: 424 KAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
+ +V + GF V+ +S++ MY + G+L +A K+ +K + +V+ +NS+I
Sbjct: 370 QGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMI 425
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
+ + + +L+ M+ + P+ +++ +MI Y K G+ +LF +G V
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 544 I-DRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
+ A +++ + + G+ D+ ++L + M+
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/414 (19%), Positives = 172/414 (41%), Gaps = 43/414 (10%)
Query: 185 FKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDC 244
F+ E V A+ S L Y + V + ++++ + ++ ++ Y++L C
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 245 ESVVKLFHEFESRNLR-DSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV 303
++ + L + E+ + D + I G++ G +AL+ FR M G+ ++V
Sbjct: 299 DAAMDLMQKMETFGITADVFTWTAMISGLIHN-----GMRYQALDMFRKMFLAGVVPNAV 353
Query: 304 -YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
+ + + + L + + E+ A I D V LV MY + LE +V +++
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSV 413
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
K+ DV + M + G+ + A + ++ P +T+ ++I+ Y +
Sbjct: 414 KNKDVYTWNSM----ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDE 469
Query: 423 NKAEKVFEEMEQKG-FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
+A +F+ ME+ G + ++ +I Y ++G+ A++L KM+ PN S
Sbjct: 470 GEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILS 529
Query: 482 LI-------------DMHG--REKNLRQLEKLWNEMK-----------RRKV-----APD 510
L+ ++HG +NL + + N + R + D
Sbjct: 530 LLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD 589
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQ 564
+++ S+IG Y G + LFN+ + G +R ++ +G +D+
Sbjct: 590 IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDE 643
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/244 (18%), Positives = 107/244 (43%), Gaps = 10/244 (4%)
Query: 335 DPEVYL--KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
+P+V++ KL+ MY + + +V ++M++ ++ M+ A +S+ + +
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGA----YSRENRWREVAK 167
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
+ ++ G P + ++ + + + + G C+ +S++ +Y
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
+ G L A K +M+ER +V +NS++ + + + +L EM++ ++P V
Sbjct: 228 KCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 513 SYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
++ +IG Y++ G+ + +L + G D M+ G Q + + + M
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 573 KMEG 576
+ G
Sbjct: 344 FLAG 347
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 93/233 (39%), Gaps = 43/233 (18%)
Query: 403 EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMK 462
EP +++ Y + A KVF+ M ++ + +S+MI Y R R R K
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERN----LFTWSAMIGAYSRENRWREVAK 167
Query: 463 LVAKMKERGCKPNVWVY-----------------------------------NSLIDMHG 487
L M + G P+ +++ NS++ ++
Sbjct: 168 LFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 488 REKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRA 547
+ L K + M+ R D +++ S++ AY + G+ E EL E G
Sbjct: 228 KCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 548 MAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
I++G ++++G+ D + L+Q M+ G D + + + I G++ QA
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQA 336
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/442 (18%), Positives = 167/442 (37%), Gaps = 52/442 (11%)
Query: 160 ATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKL 219
+T KL+E CI + L F +E VF L Y K VF+ +
Sbjct: 82 STYLKLLESCIDSGSIHLGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSM 141
Query: 220 KSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGK 279
+ ++ +S ++ AYS+ + V KLF ++D ++ + +
Sbjct: 142 RERNLFT----WSAMIGAYSRENRWREVAKLFRLM----MKDGVLPDDFLFPKILQGCAN 193
Query: 280 CGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV 338
CG V V+ K G+ V ++++ +A ++ + R + R I
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVI----A 249
Query: 339 YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLI 398
+ +++ Y + E+ +E+V+ M+
Sbjct: 250 WNSVLLAYCQNGKHEEAVELVKEME----------------------------------- 274
Query: 399 SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLR 458
+G PG VT+ +I Y +L + + A + ++ME G V +++MI +G
Sbjct: 275 KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRY 334
Query: 459 NAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
A+ + KM G PN S + K + Q ++ + + D + S++
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
YSK G+ E ++F+ + D M+ + + G + +L M+ R
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLR 450
Query: 579 LDQRLYQSAWNAFIEAGLQLQA 600
+ + + + +I+ G + +A
Sbjct: 451 PNIITWNTMISGYIKNGDEGEA 472
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/463 (18%), Positives = 182/463 (39%), Gaps = 38/463 (8%)
Query: 91 NEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDF 150
N L Q+ K EE A + + ++ + P T +I + K D + + +
Sbjct: 251 NSVLLAYCQNGKHEE-AVELVKEMEKEGI-SPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308
Query: 151 KIYHVLPDGATCSKLIEFCIRQ----------RKFKIAETLLNAFKSDSEVAVFAFGSAL 200
+ + + D T + +I I RK +A + NA S V+ + +
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 201 RNYNKLHMFR-RTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNL 259
+++H + + + L NS+V + YSK E K+F +++
Sbjct: 369 NQGSEVHSIAVKMGFIDDVLVGNSLV----------DMYSKCGKLEDARKVFDSVKNK-- 416
Query: 260 RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVG 318
D + I G C++ G CG+ A E F M + + + ++T+I + G
Sbjct: 417 -DVYTWNSMITGY-CQA-GYCGK---AYELFTRMQDANLRPNIITWNTMISGYIKNGDEG 470
Query: 319 EVEELLREAKSRTKIKDPEVYLKLVIM-YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
E +L + + K++ L+I Y++ ++ LE+ M+ + + ++
Sbjct: 471 EAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSL 530
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+ + G + ++ + + ++ + Y + + +F ME K
Sbjct: 531 LPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKD- 589
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
++ ++S+I Y G A+ L +MK +G PN +S+I HG N+ + +K
Sbjct: 590 ---IITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKK 646
Query: 498 LWNEMKRR-KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI 539
++ + + P ++M+ Y +A E + E I
Sbjct: 647 VFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNI 689
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 104/204 (50%), Gaps = 3/204 (1%)
Query: 384 RRGFSAAVRAYEKLISQG-YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
++ + A+ ++ L Q Y+P + TY ++ + Q N+A+K+F+EM ++G + V
Sbjct: 101 KKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVE 160
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKE-RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
Y++++ Y RS + +A ++ KMK C+P+V+ Y++L+ ++ L+ E
Sbjct: 161 LYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKE 220
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV-IDRAMAGIMVGVFSKVG 560
M R + P+ V+ ++ Y + G F+ ++ ++ ++ D I++ VF +G
Sbjct: 221 MDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMG 280
Query: 561 QIDQLVKLLQDMKMEGTRLDQRLY 584
+ID + + + G + R +
Sbjct: 281 KIDMMESWYEKFRNFGIEPETRTF 304
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 125/290 (43%), Gaps = 2/290 (0%)
Query: 285 EALEYFRVMTKKGIF--ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKL 342
+AL+ F VM+K+ S YS LI + ++ E L + + Y L
Sbjct: 248 DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVL 307
Query: 343 VIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGY 402
+ + L++K + + M K +++G + A K++
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 403 EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMK 462
P +TY ++IN YC+ + A ++ ME++ V ++ ++ R G+ A+
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427
Query: 463 LVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYS 522
L+ +M + G P++ YN LID RE ++ KL + M + PD +++T++I A+
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 523 KAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
K G+ + + G +D ++ KVG+ + +L+ +
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/401 (20%), Positives = 160/401 (39%), Gaps = 40/401 (9%)
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEAL 287
+R Y+ +++A + LF E R + + Y VL + L + G++ EA
Sbjct: 301 TRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNV----HTYTVLIDGLCRDGKIEEAN 356
Query: 288 EYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMY 346
R M K IF S + Y+ LI + +V ELL + R + + +L+
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 347 VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQ 406
K + +++ M D + +++G + + A + + EP
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA------ 460
+T+ ++INA+C+ + + A M +KG V +++I + G+ R+A
Sbjct: 477 LTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET 536
Query: 461 ------------MKLVAKMKERGCK-----------------PNVWVYNSLIDMHGREKN 491
+ ++ M +GCK P+V Y +L+D R +
Sbjct: 537 LVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGD 596
Query: 492 LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI 551
+ ++ MK P+ YT +I + G E +L + + +G + +
Sbjct: 597 ITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTV 656
Query: 552 MVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
MV + G++D+ ++ ++ M G L+ R+Y S F+
Sbjct: 657 MVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFV 697
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 94/219 (42%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+++G + A +++ +G +P TY +I A C +KA +F+EM +G
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG 331
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
V Y+ +I R G++ A + KM + P+V YN+LI+ + ++ +
Sbjct: 332 CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
+L M++R P+ ++ ++ + G+ L NG D +++
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
+ G ++ KLL M D + + NAF + G
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQG 490
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 151/384 (39%), Gaps = 17/384 (4%)
Query: 107 AFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLI 166
AF+ + + R +P T +I L R K + V + P T + LI
Sbjct: 320 AFNLFDEMIPRGC-KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Query: 167 E-FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVV 225
+C R E L K + V F + ++ + V + +++ N +
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 226 LDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSE 285
D Y+ +++ + + KL ++ I C+ G+
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQ----GKADV 494
Query: 286 ALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
A + +M +KGI V T + + KVG+ + L ++ K++ L ++
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTL--IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 346 YVEEDLLEKTLEVVEAM----KDADVKVCDCMLC--AVVNGFSKRRGFSAAVRAYEKLIS 399
D+L K +V E + K + + ++ +V+G + + + R E +
Sbjct: 553 L---DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL 609
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
G P Y +IN C+ + +AEK+ M+ G V Y+ M+ Y +G+L
Sbjct: 610 SGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDR 669
Query: 460 AMKLVAKMKERGCKPNVWVYNSLI 483
A++ V M ERG + N +Y+SL+
Sbjct: 670 ALETVRAMVERGYELNDRIYSSLL 693
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 129/286 (45%), Gaps = 4/286 (1%)
Query: 289 YFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMY 346
+F+ K+ +E SV Y +I S A + + + +L+ A + K+ + E + ++ Y
Sbjct: 120 FFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLI-NAMRKKKMLNVETFCIVMRKY 178
Query: 347 VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQ 406
+++ + M+ D+ +++ K + A +E + + + P
Sbjct: 179 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDS 237
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
TY+ ++ + + KA +VF EM G +V YS M+ + ++GR+ A+ +V
Sbjct: 238 KTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS 297
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
M CKP ++Y+ L+ +G E L + + EM+R + D + S+IGA+ KA
Sbjct: 298 MDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR 357
Query: 527 FETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
+ + E + G + I++ + G+ D+ + + M
Sbjct: 358 MKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
C V+ +++ + A+ A+ + P V + +++A C+ KA++VFE M
Sbjct: 171 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 230
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
+ F YS ++ +G+ L A ++ +M + GC P++ Y+ ++D+ + +
Sbjct: 231 DR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVD 289
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+ + M P Y+ ++ Y E + F E +G D A+ ++
Sbjct: 290 EALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLI 349
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
G F K ++ + ++L++MK +G + + IE G + +A
Sbjct: 350 GAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEA 396
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 149/357 (41%), Gaps = 19/357 (5%)
Query: 165 LIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSV 224
+IE + R++K+ L+NA + + V F +R Y + + F ++ +
Sbjct: 140 MIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDL 199
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVS 284
+ ++ ++ A K + ++F R DSK Y +L E GK +
Sbjct: 200 PPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSK-----TYSILLEGWGKEPNLP 254
Query: 285 EALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPE------- 337
+A E FR M G V +++ L K G V+E L +S DP
Sbjct: 255 KAREVFREMIDAGCHPDIVTYSIMVDI--LCKAGRVDEALGIVRS----MDPSICKPTTF 308
Query: 338 VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKL 397
+Y LV Y E+ LE+ ++ M+ + +K + +++ F K R +++
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 398 ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRL 457
S+G P + ++ + ++A VF +M K + Y+ +I M+ +
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEM 427
Query: 458 RNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSY 514
A K+ M+++G P++ ++ LI+ E+ ++ L EM + P V++
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 24/328 (7%)
Query: 168 FCIRQRKFKIAETLLNAF-------KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLK 220
FCI RK+ A+ + A K D + AF L K R+ VFE ++
Sbjct: 171 FCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR 230
Query: 221 SNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI-YGVLCESLGK 279
+ DS+ YS ++E + K + ++F E + D+ + + Y ++ + L K
Sbjct: 231 -DRFTPDSKTYSILLEGWGKEPNLPKAREVFRE-----MIDAGCHPDIVTYSIMVDILCK 284
Query: 280 CGRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV 338
GRV EAL R M ++ +YS L+ ++ + +++ E + E + D V
Sbjct: 285 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
Query: 339 YLKLVIMYVEEDLLEKTLEVVEAMKDADV----KVCDCMLCAVVNGFSKRRGFSAAVRAY 394
+ L+ + + + ++ V++ MK V K C+ +L ++ K F +
Sbjct: 345 FNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV----F 400
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
K+I + EP TY VI +C + A+KV++ M +KG + +S +I
Sbjct: 401 RKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEE 459
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSL 482
+ A L+ +M E G +P+ + L
Sbjct: 460 RTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/377 (19%), Positives = 137/377 (36%), Gaps = 41/377 (10%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKS 329
Y ++ ES K + + M KK + + ++ +A KV E +
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEK 196
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD---ADVKVCDCMLCAVVNGFSKRRG 386
+ + L+ + + K EV E M+D D K +L G+ K
Sbjct: 197 YDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILL----EGWGKEPN 252
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
A + ++I G P VTY+ +++ C+ + ++A + M+ YS
Sbjct: 253 LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSV 312
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
++ YG RL A+ +M+ G K +V V+NSLI + ++ + ++ EMK +
Sbjct: 313 LVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKG 372
Query: 507 VAP----------------------------------DKVSYTSMIGAYSKAGEFETCTE 532
V P D +YT +I + + E ET +
Sbjct: 373 VTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADK 432
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
++ R G +++ + + LL++M G R + I
Sbjct: 433 VWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLI 492
Query: 593 EAGLQLQAKWLQESFHV 609
+ + K+L E +V
Sbjct: 493 KEEREDVLKFLNEKMNV 509
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 159/384 (41%), Gaps = 27/384 (7%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
+ +M+ K K+F + R + ++ Y +L L + G +A + F
Sbjct: 201 FGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR----VTYTILISGLCQRGSADDARKLF 256
Query: 291 RVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE 349
M G + SV ++ L+ F L ++ E ELLR + + Y L+
Sbjct: 257 YEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRA 316
Query: 350 DLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
+ E+ M ++K + ++ G SK A++ + S+G P Y
Sbjct: 317 RRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCY 376
Query: 410 ASVINAYCRLSQYNKAEKVFEEM-EQKGF-DKCVVAYSSMIVMYGRSGRLRNAMKLVAKM 467
+VI A C + + EM E + F D C ++ +I R+G +R A ++ ++
Sbjct: 377 NAVIKALCGRGLLEEGRSLQLEMSETESFPDAC--THTILICSMCRNGLVREAEEIFTEI 434
Query: 468 KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE- 526
++ GC P+V +N+LID + L++ L ++M+ + A S+ S +G
Sbjct: 435 EKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPA-------SLFLRLSHSGNR 487
Query: 527 -FETCTE---LFNEYR------INGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
F+T E + YR G D +++ F + G ID +KLL ++++G
Sbjct: 488 SFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKG 547
Query: 577 TRLDQRLYQSAWNAFIEAGLQLQA 600
D Y + N G + +A
Sbjct: 548 LSPDSVTYNTLINGLHRVGREEEA 571
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 118/247 (47%), Gaps = 9/247 (3%)
Query: 300 ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKD--PEVYLKLVIMYV---EEDLLEK 354
+S + LI ++A K+G E+ + E+ R K D P+V+ VI+ V EE
Sbjct: 126 DSYCFCVLISAYA---KMGMAEKAV-ESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVIN 414
V M + +++G K+ S A + ++ + +G P +VTY +I+
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKP 474
C+ + A K+F EM+ G VA+++++ + + GR+ A +L+ ++ G
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 475 NVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
+ Y+SLID R + Q +L+ M ++ + PD + YT +I SKAG+ E +L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 535 NEYRING 541
+ G
Sbjct: 362 SSMPSKG 368
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 166/422 (39%), Gaps = 50/422 (11%)
Query: 157 PDGATCSKLIEFCIRQRKF-KIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVL 214
PD T + ++ +R+ F +A + N K + ++ FG + K
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFE-SRNLRDSKRYLGQIYGVL 273
+F+ + + + Y+ ++ + + KLF+E + S N DS + L
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDS-----VAHNAL 274
Query: 274 CESLGKCGRVSEALEYFRVMTKKG-IFESSVYSTLICSFASLHKVGEVEELLREAKSRTK 332
+ K GR+ EA E R+ K G + YS+LI + + EL +
Sbjct: 275 LDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNI 334
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
D +Y L+ + +E L+++ +M + AV+ R G R
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGR-GLLEEGR 393
Query: 393 AYEKLISQGYE-PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
+ + +S+ P T+ +I + CR +AE++F E+E+ G V ++++I
Sbjct: 394 SLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Query: 452 GRSGRLRNAMKLVAKMK---------------------------------------ERGC 472
+SG L+ A L+ KM+ + G
Sbjct: 454 CKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGS 513
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
P++ YN LI+ R ++ KL N ++ + ++PD V+Y ++I + G E +
Sbjct: 514 SPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFK 573
Query: 533 LF 534
LF
Sbjct: 574 LF 575
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 104/225 (46%), Gaps = 1/225 (0%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
V++ S+ G + E+L S G + +I+AY ++ KA + F M++
Sbjct: 98 VIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157
Query: 437 FDKCVVAYSSMI-VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
V Y+ ++ VM A + +M + C PN++ + L+D ++
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
+K++++M R ++P++V+YT +I + G + +LF E + +G D ++
Sbjct: 218 QKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDG 277
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
F K+G++ + +LL+ + +G L R Y S + A QA
Sbjct: 278 FCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQA 322
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/234 (20%), Positives = 102/234 (43%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+++G +R A + + ++ + G P V + ++++ +C+L + +A ++ E+ G
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
F + YSS+I R+ R A +L A M ++ KP++ +Y LI + +
Sbjct: 299 FVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDAL 358
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
KL + M + ++PD Y ++I A G E L E D I++
Sbjct: 359 KLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSM 418
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESFHVS 610
+ G + + ++ +++ G + + + ++G +A+ L V
Sbjct: 419 CRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVG 472
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 134/312 (42%), Gaps = 2/312 (0%)
Query: 267 GQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEELLR 325
+++ ++ + + SEA F M + GI L+ S V +E
Sbjct: 138 SKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFG 197
Query: 326 EAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRR 385
+AK + + Y LV + +V + M + + V A+++ K
Sbjct: 198 KAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSG 257
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
+ ++++ + G +P ++A I+AYC + A KV + M++ V ++
Sbjct: 258 DVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFN 317
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
+I ++ ++ +A L+ +M ++G P+ W YNS++ H + + KL + M R
Sbjct: 318 HIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRT 377
Query: 506 KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV-GVFSKVGQIDQ 564
K PD+ +Y ++ + G F+ TE++ A +M+ G+ K G++++
Sbjct: 378 KCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEE 437
Query: 565 LVKLLQDMKMEG 576
+ + M EG
Sbjct: 438 ACRYFEMMIDEG 449
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 91/210 (43%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
V +S+ S A RA+ +++ G +P ++++ C N A++ F + + G
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFG 203
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
YS ++ + R A K+ +M ER C ++ YN+L+D + ++
Sbjct: 204 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 263
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
K++ EM + PD S+ I AY AG+ + ++ + + V + ++
Sbjct: 264 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 323
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
K ++D LL +M +G D Y S
Sbjct: 324 CKNEKVDDAYLLLDEMIQKGANPDTWTYNS 353
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 98/181 (54%), Gaps = 16/181 (8%)
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G++ V S ++ Y + A KVF EM ++ V++++++V Y +SG L A
Sbjct: 140 GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERN----AVSWTALVVAYVKSGELEEA 195
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+ M ER N+ +N+L+D + +L +KL++EM +R D +SYTSMI
Sbjct: 196 KSMFDLMPER----NLGSWNALVDGLVKSGDLVNAKKLFDEMPKR----DIISYTSMIDG 247
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
Y+K G+ + +LF E R GV RA + +++G +++ GQ ++ K+ +M + + D
Sbjct: 248 YAKGGDMVSARDLFEEAR---GVDVRAWSALILG-YAQNGQPNEAFKVFSEMCAKNVKPD 303
Query: 581 Q 581
+
Sbjct: 304 E 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 117/271 (43%), Gaps = 52/271 (19%)
Query: 339 YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLI 398
+ LV+ YV+ LE+ + + M + ++ + A+V+G K A + ++++
Sbjct: 179 WTALVVAYVKSGELEEAKSMFDLMPERNLGSWN----ALVDGLVKSGDLVNAKKLFDEMP 234
Query: 399 SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLR 458
+ ++Y S+I+ Y + A +FE E +G D V A+S++I+ Y ++G+
Sbjct: 235 KRDI----ISYTSMIDGYAKGGDMVSARDLFE--EARGVD--VRAWSALILGYAQNGQPN 286
Query: 459 NAMKLVAKMKERGCKPNV------------------------------------WVYNSL 482
A K+ ++M + KP+ +V +L
Sbjct: 287 EAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPAL 346
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG 542
IDM+ + ++ + KL+ EM +R D VSY SM+ + G LF + G
Sbjct: 347 IDMNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGI 402
Query: 543 VIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
V D +++ V + +++ ++ + M+
Sbjct: 403 VPDEVAFTVILKVCGQSRLVEEGLRYFELMR 433
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 93/177 (52%)
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+G +P VTY S+I+ YC+ + KA K+ ++M ++ V+ Y+++I G G+
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDK 299
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
A +++ +MKE GC P+V YN+ I + L +KL +EM ++ ++P+ +Y
Sbjct: 300 AREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFR 359
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
S A + EL+ N + + ++ +F + ++D ++L +DM ++G
Sbjct: 360 VLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++++ + K R A + +K+ + P +TY +VI + Q +KA +V +EM++
Sbjct: 251 SLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEY 310
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G V AY++ I + + RL +A KLV +M ++G PN YN + +L +
Sbjct: 311 GCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRS 370
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
+L+ M + P+ S +I + + + + L+ + + G
Sbjct: 371 WELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 153/355 (43%), Gaps = 13/355 (3%)
Query: 214 LVFEKLKSN--SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYG 271
LVF++++S+ S ++ + + ++ Y++ + ++ F S ++
Sbjct: 157 LVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLE 216
Query: 272 VLCESLGKCGRVSEALEYFR----VMTKKGIFESSVYSTLICSFASLHKVGEVEELLREA 327
VL ++L K G V EA Y M + +++ L+ + K+ + E+L E
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
K+ Y L+ Y ++ +EV+E MK A++++ + +++G +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
S A+ E+ P VTY S++ +C+ A K+ + M +G D Y+
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
+ + + M L K+ E G P+ Y+ ++ M + L ++ EMK R +
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEY--RINGGVIDRAMAGIMV--GVFSK 558
PD ++ T +I + E E F E+ + G+I + + M+ G+ SK
Sbjct: 457 DPDLLTTTMLIHLLCR---LEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSK 508
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 96/204 (47%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++NG+ + R A + +E++ + +P VTY ++I YCR+ + A +V EEM+
Sbjct: 256 LLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAE 315
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ + ++ +I G +GRL A+ ++ + P + YNSL+ + +L
Sbjct: 316 MEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGAS 375
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
K+ M R V P +Y +SK + E L+ + G DR +++ +
Sbjct: 376 KILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKML 435
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLD 580
+ G++ +++ ++MK G D
Sbjct: 436 CEDGKLSLAMQVNKEMKNRGIDPD 459
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 197/479 (41%), Gaps = 36/479 (7%)
Query: 129 HVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSD 188
H+I++ R + +L + ++ + PD SKLI F RQ +F+ A L+ F
Sbjct: 27 HLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQA---LHVFDEI 83
Query: 189 SEVAVFAFGSALRNYNKLHMFRRTVLVFEKL------KSNSVVLDSRGYSHIMEAYSKLD 242
+ F++ + L Y M+ +F S++ DS S +++A S D
Sbjct: 84 TVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCD 143
Query: 243 D--CESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFE 300
D S+ + H F R DS ++G + KC + A + F M+++ +
Sbjct: 144 DFWLGSLARQVHGFVIRGGFDSDVFVGN---GMITYYTKCDNIESARKVFDEMSERDVVS 200
Query: 301 SSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE--DLLEKTLEV 358
++++I ++ + +++ + + + K V + V + DL+ LEV
Sbjct: 201 ---WNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLI-FGLEV 256
Query: 359 VEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCR 418
+ M + +++ D LC V GF + G RA L + E VTY ++I+ Y
Sbjct: 257 HKKMIENHIQM-DLSLCNAVIGFYAKCGSLDYARA---LFDEMSEKDSVTYGAIISGYMA 312
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
+A +F EME G +++MI ++ + +M G +PN
Sbjct: 313 HGLVKEAMALFSEMESIGLS----TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVT 368
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYR 538
+SL+ NL+ +++ R + TS+I Y+K G +F+ +
Sbjct: 369 LSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCK 428
Query: 539 INGGVIDRAMAG--IMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
DR++ ++ ++ G D L M+ GT+ D + +AF +G
Sbjct: 429 ------DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSG 481
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 130/310 (41%), Gaps = 30/310 (9%)
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
DS Y I+ Y + + LF E ES L + + L + E
Sbjct: 299 DSVTYGAIISGYMAHGLVKEAMALFSEMESIGL--------STWNAMISGLMQNNHHEEV 350
Query: 287 LEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
+ FR M + G ++V S+L+ S + +E+ A + D +Y+ I+
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI--HAFAIRNGADNNIYVTTSII 408
Query: 346 --YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
Y + L V + KD + A++ ++ +A ++++ G +
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSL----IAWTAIITAYAVHGDSDSACSLFDQMQCLGTK 464
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAYSSMIVMYGRSGRLRNAMK 462
P VT +V++A+ + A+ +F+ M K + V Y+ M+ + R+G+L +AM+
Sbjct: 465 PDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAME 524
Query: 463 LVAKMKERGCKPNVWVYNSLIDMHGREKNLR----QLEKLWNEMKRRKVAPDKVSYTSMI 518
++KM P V+ +L++ +L ++L+ EM+ +YT M
Sbjct: 525 FISKMP---IDPIAKVWGALLNGASVLGDLEIARFACDRLF-EMEPENTG----NYTIMA 576
Query: 519 GAYSKAGEFE 528
Y++AG +E
Sbjct: 577 NLYTQAGRWE 586
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 132/297 (44%), Gaps = 5/297 (1%)
Query: 316 KVGEVEELLREAKSRTKIKDPE--VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCM 373
K GE+E++ S + P+ Y L+ + + L++ + M VK
Sbjct: 130 KCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT 189
Query: 374 LCAVVNGFSKRRGFSAAVRA-YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
+++G K A++ ++ L G P YAS+I A C++ + + A K+ +E
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 433 EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL 492
+ YS++I ++GR ++ +M E+GCKP+ YN LI+ E +
Sbjct: 250 YEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDS 309
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIM 552
++ +EM + + PD +SY ++G + + ++E T LF + G D I+
Sbjct: 310 ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG-LQLQAKWLQESFH 608
+ Q ++ +L +M +G + + + E+G L++ +K + S H
Sbjct: 370 FDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVIS-SLH 425
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 129/313 (41%), Gaps = 10/313 (3%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEV----EELL 324
Y +L + G +AL+ F M KK + + V + TLI +V E ++L
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 325 REAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKR 384
+ R + +Y L+ + L ++ + + +KV + +++ K
Sbjct: 215 KVYGVRPTV---HIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKA 271
Query: 385 RGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAY 444
+ E++ +G +P VTY +IN +C + A +V +EM +KG V++Y
Sbjct: 272 GRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY 331
Query: 445 SSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
+ ++ ++ R + A L M RGC P+ Y + D + + +EM
Sbjct: 332 NMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLF 391
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI-D 563
+ P + + ++G+ E +++ + G D + +M+ K I D
Sbjct: 392 KGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPVISD 450
Query: 564 QLVKLLQDMKMEG 576
+ LL +K +G
Sbjct: 451 SIDLLLNTVKEDG 463
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P ++ + +VIN + R ++A +F+EM Q + V + +S++ + G L +
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
++ + E G KP+ YN LI + KL++EM ++KV P V++ ++I K
Sbjct: 141 LSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCK 199
Query: 524 AGEFETCTELFNE-YRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG-TRLDQ 581
+ ++ ++ ++ G + ++ ++G++ K L+D EG ++D
Sbjct: 200 DSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFK-LKDEAYEGKIKVDA 258
Query: 582 RLYQSAWNAFIEAG 595
+Y + ++ I+AG
Sbjct: 259 AIYSTLISSLIKAG 272
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 34/229 (14%)
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC------------------- 375
D + LV YV+ LE V E MKD +V C M+
Sbjct: 174 DDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTK 233
Query: 376 --------AVVNGFSKRRGFSA--AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKA 425
A+V GFS R G +A +V Y + G+ P T+ASVI A L+ +
Sbjct: 234 VKDIVVYNAMVEGFS-RSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 426 EKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDM 485
++V ++ + G + SS++ MY + G + +A ++ +M+E+ NV+ + S+ID
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK----NVFSWTSMIDG 348
Query: 486 HGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
+G+ N + +L+ MK ++ P+ V++ + A S +G + E+F
Sbjct: 349 YGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIF 397
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 146/356 (41%), Gaps = 32/356 (8%)
Query: 232 SHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFR 291
+ ++ YS L + K+F + R + ++ L +L G E L +
Sbjct: 116 TKLIGMYSDLGSVDYARKVFDKTRKRTI--------YVWNALFRALTLAGHGEEVLGLYW 167
Query: 292 VMTKKGIFESSVYSTLI--------CSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
M + G+ T + C+ L K E+ L + + + LV
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVY---IMTTLV 224
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCML-CAVVNG--FSKRRGFSAAVRAYEKLISQ 400
MY ++ V M +V M+ C NG F R F +R ++
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRE-----TK 279
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
P VT SV+ A L+ + + + + ++G D + S+++ MYGR G+L
Sbjct: 280 DSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVG 339
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
++ +M +R +V +NSLI +G ++ +++ EM +P V++ S++GA
Sbjct: 340 QRVFDRMHDR----DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGA 395
Query: 521 YSKAGEFETCTELFNE-YRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
S G E LF +R +G MV + + ++D+ K++QDM+ E
Sbjct: 396 CSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTE 451
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/404 (21%), Positives = 173/404 (42%), Gaps = 16/404 (3%)
Query: 196 FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLF-HEF 254
F + + + KL M + ++F ++ V + Y ++ +Y K + + ++LF +
Sbjct: 310 FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNT 369
Query: 255 ESRNL-RDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFA 312
S ++ R+ Y I+G K G + +A++ M GI + Y L+
Sbjct: 370 GSEDISRNVHCYTNLIFGFY-----KKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLP 424
Query: 313 SLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVE-EDLLEKTLEVVEAMKDADVKVCD 371
H++ +L+ +P V L + V+ E LL + A KDA++
Sbjct: 425 KCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEI-----ARKDANLAAVG 479
Query: 372 CMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEE 431
L V +R + AA+ EK+++ G P +Y SVI + + +
Sbjct: 480 --LAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 432 MEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKN 491
+++ F V Y ++ + A ++ M+E G +P V +Y+S+I G++
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 492 LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGI 551
+ + E+ + +M + PD+++Y MI Y++ G + EL E + +
Sbjct: 598 VVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTV 657
Query: 552 MVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
++ F K+G +++ + L M +G + LY + F++ G
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKG 701
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 151/336 (44%), Gaps = 17/336 (5%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSK----------- 263
V + L +++ D +I++ + D ++ + + +E +N RD+
Sbjct: 518 VIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELG 577
Query: 264 -RYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVE 321
R IY + SLGK GRV EA E F M + GI + Y +I ++A ++ E
Sbjct: 578 LRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEAN 637
Query: 322 ELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGF 381
EL+ E Y L+ +V+ ++EK + ++ M + + + A++ F
Sbjct: 638 ELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHF 697
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
K+ F + + + + + Y ++++ R K +V E ++ + +
Sbjct: 698 LKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRL 757
Query: 442 VAYSSMIVM---YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKL 498
+ ++ + G G AM+++ K+K + PN++++N++I + L +
Sbjct: 758 IRTKPLVSIPSSLGNYGSKSFAMEVIGKVK-KSIIPNLYLHNTIITGYCAAGRLDEAYNH 816
Query: 499 WNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
M++ + P+ V+YT ++ ++ +AG+ E+ +LF
Sbjct: 817 LESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 15/184 (8%)
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y S+ +C+ +AE +F+ ME G+ V Y+ ++ Y + + AM+L +M
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEK---LWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
ER + + ++N+LI HG K L L+K ++++M ++ V + +Y MIG+Y K G
Sbjct: 300 ERSFELDPCIFNTLI--HGFMK-LGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEG 356
Query: 526 EFETCTELFNEYRINGGVID-----RAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
+ LF N G D ++ G F K G +D+ V LL M G D
Sbjct: 357 NVDYALRLFVN---NTGSEDISRNVHCYTNLIFG-FYKKGGMDKAVDLLMRMLDNGIVPD 412
Query: 581 QRLY 584
Y
Sbjct: 413 HITY 416
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 99/210 (47%), Gaps = 6/210 (2%)
Query: 384 RRGFSAAVRA-YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF--DKC 440
+RG +A A ++ + GY +V Y ++ YC+ + A +++ M ++ F D C
Sbjct: 249 KRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPC 308
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLW- 499
+ ++++I + + G L + ++M ++G + NV+ Y+ +I + +E N+ +L+
Sbjct: 309 I--FNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFV 366
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKV 559
N ++ + YT++I + K G + +L NG V D +++ + K
Sbjct: 367 NNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKC 426
Query: 560 GQIDQLVKLLQDMKMEGTRLDQRLYQSAWN 589
++ + +LQ + G ++ + N
Sbjct: 427 HELKYAMVILQSILDNGCGINPPVIDDLGN 456
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 155/399 (38%), Gaps = 21/399 (5%)
Query: 212 TVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQ--- 268
T L+ E K N++ + R Y ++E +LD C L H F + D R +
Sbjct: 276 TCLMKEYCKDNNMTMAMRLYLRMVERSFELDPC-IFNTLIHGFMKLGMLDKGRVMFSQMI 334
Query: 269 ---------IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKV 317
Y ++ S K G V AL F T +V Y+ LI F +
Sbjct: 335 KKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGM 394
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
+ +LL + D Y L+ M + L+ + +++++ D + ++ +
Sbjct: 395 DKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDL 454
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
N K + + ++ V A V A C Y A E+M G
Sbjct: 455 GNIEVKVESLLGEIARKDANLAA------VGLAVVTTALCSQRNYIAALSRIEKMVNLGC 508
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
+Y+S+I + + + LV ++E P+V Y +++ ++ +
Sbjct: 509 TPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFA 568
Query: 498 LWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFS 557
+ + M+ + P Y+S+IG+ K G E F + +G D IM+ ++
Sbjct: 569 IIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYA 628
Query: 558 KVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
+ G+ID+ +L++++ R Y + F++ G+
Sbjct: 629 RNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGM 667
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 162/351 (46%), Gaps = 22/351 (6%)
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVS 284
+ D + +M AYSK ++LF E + + + I G L ++ GK
Sbjct: 327 LFDQNIRTALMVAYSKCTAMLDALRLFKEIGC--VGNVVSWTAMISGFL-QNDGK----E 379
Query: 285 EALEYFRVMTKKGIFESS-VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLV 343
EA++ F M +KG+ + YS ++ + + ++++ R+ V L+
Sbjct: 380 EAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSST----VGTALL 435
Query: 344 IMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE 403
YV+ +E+ +V + D D+ ML G+++ AA++ + +L G +
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA----GYAQTGETEAAIKMFGELTKGGIK 491
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG-FDKCVVAYSSMIVMYGRSGRLRNAMK 462
P + T++S++N + K F K D + S+++ MY + G + +A +
Sbjct: 492 PNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEE 551
Query: 463 LVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYS 522
+ + +E+ ++ +NS+I + + + ++ EMK+RKV D V++ + A +
Sbjct: 552 VFKRQREK----DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT 607
Query: 523 KAGEFETCTELFNEYRINGGVI-DRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
AG E + F+ + + + MV ++S+ GQ+++ +K++++M
Sbjct: 608 HAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/400 (18%), Positives = 182/400 (45%), Gaps = 23/400 (5%)
Query: 198 SALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESR 257
S + Y K R+ ++F+K + SVV ++ ++ Y+ + +F+
Sbjct: 234 SLINLYLKCGNVRKARILFDKTEVKSVVT----WNSMISGYAANGLDLEALGMFYSMRLN 289
Query: 258 NLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKV 317
+R S+ + LC +L + R +E L + V+ +F+ ++ + L+ +++ K
Sbjct: 290 YVRLSESSFASVIK-LCANLKEL-RFTEQL-HCSVVKYGFLFDQNIRTALMVAYS---KC 343
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
+ + LR K + + + ++ +++ D E+ +++ MK V+ + +
Sbjct: 344 TAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVI 403
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+ + + +++ YE ++++AY +L + +A KVF ++
Sbjct: 404 LTALP----VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGID---- 455
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDM-HGREKNLRQLE 496
DK +VA+S+M+ Y ++G A+K+ ++ + G KPN + ++S++++ ++ Q +
Sbjct: 456 DKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGK 515
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
+ + ++ ++++ Y+K G E+ E+F R D M+ +
Sbjct: 516 QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK----DLVSWNSMISGY 571
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
++ GQ + + + ++MK ++D + + A AGL
Sbjct: 572 AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGL 611
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 75/367 (20%), Positives = 149/367 (40%), Gaps = 52/367 (14%)
Query: 254 FESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFA 312
F+ RD + Y+ ++G + GR EA F + + G+ + S++S+++ A
Sbjct: 50 FDKSPGRDRESYISLLFG-----FSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 313 SLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDC 372
+L +L + + D V LV Y++ + +V + MK+ +V
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV----V 160
Query: 373 MLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYA---------------------- 410
+++G+++ + + ++ ++G +P T+A
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 411 -------------SVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRL 457
S+IN Y + KA +F++ E K VV ++SMI Y +G
Sbjct: 221 VKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS----VVTWNSMISGYAANGLD 276
Query: 458 RNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSM 517
A+ + M+ + + + S+I + K LR E+L + + D+ T++
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336
Query: 518 IGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
+ AYSK LF E G V+ + ++ G G+ ++ V L +MK +G
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVV--SWTAMISGFLQNDGK-EEAVDLFSEMKRKGV 393
Query: 578 RLDQRLY 584
R ++ Y
Sbjct: 394 RPNEFTY 400
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/425 (20%), Positives = 178/425 (41%), Gaps = 13/425 (3%)
Query: 163 SKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSN 222
+K + +R+R+ + +TL++ F S FG L++ N + ++ F L SN
Sbjct: 51 AKTVSTIMRERQ-RWQQTLVSDFPSFDFADPLFFGELLKSQNNVLF---SLWFFRWLCSN 106
Query: 223 SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGR 282
+I+ + L D ++V ++ + L Q L E G
Sbjct: 107 YDYTPGPVSLNIL--FGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEE----GL 160
Query: 283 VSEALEYFRVMTKKGIFESSVY-STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
V EA+E + V+ GI S V ++++ K+ EL +E D E
Sbjct: 161 VEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRC 218
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
L+ + + + E+++ + + +++GF + ++ +I+
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
+ P Y +I C + +A +F+ ++ KG+ V Y++MI + G L +A
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
KL +M ++G +PN + YN +I H + + +E +NEM R +S +MI +
Sbjct: 339 KLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGF 398
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
G+ + E+F G + ++ F K ++++ +KL +++K G +
Sbjct: 399 CSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSG 458
Query: 582 RLYQS 586
Y +
Sbjct: 459 MAYAA 463
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 120/270 (44%), Gaps = 18/270 (6%)
Query: 253 EFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLICSF 311
EF+S +R L +L G VSE E + K+G+ VY+ LI F
Sbjct: 210 EFDSERIR-----------CLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGF 258
Query: 312 ASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLE---VVEAMKDADVK 368
+ + E+L + +Y K++ + +K LE + + +KD
Sbjct: 259 CEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC---MNKKQLEAYCIFKNLKDKGYA 315
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
+ ++ GF ++ +A + + ++I +G P + Y +I+ + + + + E
Sbjct: 316 PDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAF 375
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR 488
+ EM + G+ +++ ++MI + G+ A ++ M E G PN YN+LI +
Sbjct: 376 YNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCK 435
Query: 489 EKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
E + + KL+ E+K + P ++Y +++
Sbjct: 436 ENKVEKGLKLYKELKALGLKPSGMAYAALV 465
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 146/364 (40%), Gaps = 27/364 (7%)
Query: 184 AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDD 243
AF +E ++ S L Y + VF+K+ D+ ++ I+ +Y+K D
Sbjct: 161 AFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEK----DAVSWNLIISSYAKKGD 216
Query: 244 CESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV 303
+ LF ++ + +L C + A YF M +K
Sbjct: 217 MGNACSLFSAMPLKSPAS--------WNILIGGYVNCREMKLARTYFDAMPQK---NGVS 265
Query: 304 YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM- 362
+ T+I + L V EEL R + K+ VY ++ Y + + L++ M
Sbjct: 266 WITMISGYTKLGDVQSAEELFRLMSKKDKL----VYDAMIACYTQNGKPKDALKLFAQML 321
Query: 363 -KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
+++ ++ + L +VV+ S+ S + G + + S+I+ Y +
Sbjct: 322 ERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGD 381
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
+ KA K+F + +K V+YS+MI+ G +G A L M E+ PNV +
Sbjct: 382 FAKAFKMFSNLNKKD----TVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTG 437
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI-- 539
L+ + +++ K +N MK + P Y M+ +AG E EL +
Sbjct: 438 LLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQP 497
Query: 540 NGGV 543
N GV
Sbjct: 498 NAGV 501
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 121/271 (44%), Gaps = 1/271 (0%)
Query: 302 SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEA 361
+VY + + ++ VEE+L E K + +++ +Y + + E +V E
Sbjct: 75 AVYDRTVRRLVAAKRLHYVEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEE 134
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ-GYEPGQVTYASVINAYCRLS 420
M + D K A+++ + + F + +L + +P V+Y ++I A C
Sbjct: 135 MPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKD 194
Query: 421 QYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYN 480
+A + +E+E KG +V ++++++ G+ ++ AKM E+ ++ YN
Sbjct: 195 SLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYN 254
Query: 481 SLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRIN 540
+ + E ++L L+ E+K + PD S+ +MI G+ + + E +
Sbjct: 255 ARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKH 314
Query: 541 GGVIDRAMAGIMVGVFSKVGQIDQLVKLLQD 571
G D+A +++ K G + ++L ++
Sbjct: 315 GYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 105/220 (47%), Gaps = 1/220 (0%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK- 435
+++ + K F A + +E++ ++ + +++ ++++AY +++ E++F E+ K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
+V+Y+++I L A+ L+ +++ +G KP++ +N+L+ +
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
E++W +M + VA D +Y + + + + + LF E + +G D M+
Sbjct: 235 EEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRG 294
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
G++D+ +++ G R D+ + A +AG
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 95/196 (48%)
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+G++ TY ++++ + + VF M++KG V Y+S+I SG +
Sbjct: 116 KGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDG 175
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
AM+L +M++ GC+P V Y + + M + + + +++ EM R +V+P+ +YT ++
Sbjct: 176 AMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLME 235
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
G+ E ++F + + G D+A I++ K G+ + ++L MK G L
Sbjct: 236 YLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVL 295
Query: 580 DQRLYQSAWNAFIEAG 595
++ A AG
Sbjct: 296 RYPIFVEALETLKAAG 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
VTY S+I+ + A +++EEM G + VV+Y++ + M GR+ A ++ +
Sbjct: 158 VTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKE 217
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
M PN Y L++ + ++ +M+ V PDK + +I K GE
Sbjct: 218 MLRSRVSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGE 277
Query: 527 FETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
T + + NG V+ + + G+ D L++
Sbjct: 278 TSFMTRVLVYMKENGVVLRYPIFVEALETLKAAGESDDLLR 318
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/438 (18%), Positives = 172/438 (39%), Gaps = 81/438 (18%)
Query: 91 NEFLCGLFQDPKTEELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDF 150
++ + L D K+ A + ++ P F +ST + + L F+++D + +
Sbjct: 43 DDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTV------Y 96
Query: 151 KIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFR 210
++ +PD D + F + +R + + + +
Sbjct: 97 QLLDEMPDSI-----------------------GLPPDDAI----FVTIIRGFGRARLIK 129
Query: 211 RTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIY 270
R + V + + + + ++ I++ K D + + EF +R + S + G +Y
Sbjct: 130 RVISVVDLVSKFGIKPSLKVFNSILDVLVKED-----IDIAREFFTRKMMASGIH-GDVY 183
Query: 271 --GVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREA 327
G+L + L R+ + + ++M G+ ++V Y+TL+ + KVG L+ E
Sbjct: 184 TYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSE- 242
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
+K+P D +++ + +
Sbjct: 243 -----MKEPN---------------------------------DVTFNILISAYCNEQKL 264
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
++ EK S G+ P VT V+ C + ++A +V E +E KG VVA +++
Sbjct: 265 IQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTL 324
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
+ Y G++R A + +M+ +G PNV YN LI + L +N+MK +
Sbjct: 325 VKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAI 384
Query: 508 APDKVSYTSMIGAYSKAG 525
+ ++ ++I S G
Sbjct: 385 RWNFATFNTLIRGLSIGG 402
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 96/188 (51%), Gaps = 4/188 (2%)
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
L+S+ EP VT+ +I+AYC + ++ + E+ GF VV + ++ + GR
Sbjct: 239 LMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGR 298
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
+ A++++ +++ +G K +V N+L+ + +R ++ + EM+R+ P+ +Y
Sbjct: 299 VSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNL 358
Query: 517 MIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK--- 573
+I Y G ++ + FN+ + + + A ++ S G+ D +K+L+ M+
Sbjct: 359 LIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSD 418
Query: 574 -MEGTRLD 580
+ G R+D
Sbjct: 419 TVHGARID 426
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 155/375 (41%), Gaps = 51/375 (13%)
Query: 156 LPDGATCSKLIE-FCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVL 214
+PD T +K++E C R + E L +V V A + ++ Y L R
Sbjct: 280 VPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQR 339
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
F +++ + + Y+ ++ Y + +S + F++ ++ D+ R+ + L
Sbjct: 340 FFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKT----DAIRWNFATFNTLI 395
Query: 275 ESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIK 334
L GR + L+ +M + C +K E+ L
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDAL---------- 445
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
E LK+ E L + + D K+ LC ++ G AY
Sbjct: 446 --EFLLKM------EKLFPRAV-------DRSFKLIS--LC-------EKGGMDDLKTAY 481
Query: 395 EKLISQGYEPGQVTYASVINAYC---RLSQYNKAEKVFE---EMEQKGFDKCVVAYSSMI 448
+++I +G P S+I ++C R SQ+ K E+ E +M +G+ ++++I
Sbjct: 482 DQMIGEGGVP------SIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVI 535
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
+ + + ++ N +K V M ERGC P+ YN L++ + ++++ L++ M + +
Sbjct: 536 IGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIV 595
Query: 509 PDKVSYTSMIGAYSK 523
PD ++S++ S+
Sbjct: 596 PDPSMWSSLMFCLSQ 610
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/417 (19%), Positives = 167/417 (40%), Gaps = 28/417 (6%)
Query: 146 VSEDFKIYHVL------PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSA 199
+ + FK+ ++ P+ + L+ + K A +L++ K ++V SA
Sbjct: 198 IGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDVTFNILISA 257
Query: 200 LRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNL 259
N KL +++++ EK S V D + +ME +++ ES+
Sbjct: 258 YCNEQKLI---QSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKG- 313
Query: 260 RDSKRYLGQIYGVLCESL--GKC--GRVSEALEYFRVMTKKGIFES-SVYSTLICSFASL 314
G++ V C +L G C G++ A +F M +KG + Y+ LI + +
Sbjct: 314 -------GKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDV 366
Query: 315 HKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADV---KVCD 371
+ + + K+ + + L+ + L+++E M+D+D D
Sbjct: 367 GMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID 426
Query: 372 CMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEE 431
C V+ GF K + A+ K+ + P V + + + C + + +++
Sbjct: 427 PYNC-VIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQ 483
Query: 432 MEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKN 491
M +G ++ +I Y + G++ +++L+ M RG P +N++I ++
Sbjct: 484 MIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDK 543
Query: 492 LRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAM 548
+ K +M R PD SY ++ G+ + LF+ V D +M
Sbjct: 544 VMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSM 600
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 126/316 (39%), Gaps = 7/316 (2%)
Query: 284 SEALEYFR-VMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIK-DPEVYL 340
S ALE FR T G S S Y L + V +LL E + D +++
Sbjct: 57 SGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFV 116
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
++ + L+++ + VV+ + +K + ++++ K A K+++
Sbjct: 117 TIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMAS 176
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G TY ++ ++ K+ + M+ G V Y++++ ++G++ A
Sbjct: 177 GIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA 236
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
L+++MKE PN +N LI + E+ L Q L + PD V+ T ++
Sbjct: 237 RSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEV 292
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
G E+ GG +D +V + +G++ + +M+ +G +
Sbjct: 293 LCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPN 352
Query: 581 QRLYQSAWNAFIEAGL 596
Y + + G+
Sbjct: 353 VETYNLLIAGYCDVGM 368
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 171/368 (46%), Gaps = 12/368 (3%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLL-NAFKSDSEVAVFAFGSALRNYNKLHMFRRTV 213
V P+ T + +I + + +AE + + KS + +G+ + Y + +
Sbjct: 287 VSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEAL 346
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVL 273
+ +++ S +V+++ Y+ I+ D E + + + S+N++ + + L
Sbjct: 347 RLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGL 406
Query: 274 CESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTK 332
C + G V EA+E+ R +++K + E V ++TL+ F K+ +++L +
Sbjct: 407 CRN----GYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGL 462
Query: 333 IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
D + L+ Y++E LE+ LE+ + M + + ++VNG SKR AA
Sbjct: 463 SLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAA-- 520
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV--VAYSSMIVM 450
E +++ VTY +++N + +A+ + +M+++ +K V V ++ MI
Sbjct: 521 --EAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINH 578
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ G A +++ M ERG P+ Y +LI + ++ ++ +L + + + V P
Sbjct: 579 LCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPH 638
Query: 511 KVSYTSMI 518
+ Y S++
Sbjct: 639 EHIYLSIV 646
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 88/192 (45%)
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P VTY SVIN +C+ + + AE++ +M + G D Y +++ YGR+G A++L
Sbjct: 289 PNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRL 348
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+M +G N +YNS++ E ++ + +M + + D+ + ++ +
Sbjct: 349 CDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCR 408
Query: 524 AGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRL 583
G + E + V D ++ F + ++ ++L M ++G LD
Sbjct: 409 NGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAIS 468
Query: 584 YQSAWNAFIEAG 595
+ + + +++ G
Sbjct: 469 FGTLIDGYLKEG 480
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/325 (18%), Positives = 131/325 (40%), Gaps = 7/325 (2%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAK 328
Y + K GR+ A M K G+ Y L+ ++ E L E
Sbjct: 294 YNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMT 353
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
S+ + + +Y +V E +E + V+ M ++++ VV G +
Sbjct: 354 SKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVK 413
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
AV ++ + V + ++++ + R + A+++ M +G +++ ++I
Sbjct: 414 EAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLI 473
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
Y + G+L A+++ M + N+ +YNS+++ + E + N M+ +
Sbjct: 474 DGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK--- 530
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG--VIDRAMAGIMVGVFSKVGQIDQLV 566
D V+Y +++ K G E ++ ++ + G + IM+ K G ++
Sbjct: 531 -DIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAK 589
Query: 567 KLLQDMKMEGTRLDQRLYQSAWNAF 591
++L+ M G D Y + +F
Sbjct: 590 EVLKFMVERGVVPDSITYGTLITSF 614
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
++G+ K A+ +++ G+ P ++Y ++I YC+ ++ K ++ EME G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
+ Y++++ A+++ +MK GCKP+ YN LI R L + E+
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 498 LWN-EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
++ EM V+ + +Y SMI Y E + EL E
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P T+ I+ +C+ ++ +A +EM+ GF CV++Y+++I Y + ++
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+++M+ G PN Y +++ +K + ++ MKR PD + Y +I ++
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 524 AGEFETCTELFNEYRINGGV-IDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
AG E +F GV I+ + M+ ++ + D+ ++LL++M+
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 1/160 (0%)
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
++G+ K A+ +++ G+ P ++Y ++I YC+ ++ K ++ EME G
Sbjct: 231 IHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS 290
Query: 438 DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEK 497
+ Y++++ A+++ +MK GCKP+ YN LI R L + E+
Sbjct: 291 PPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAER 350
Query: 498 LWN-EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
++ EM V+ + +Y SMI Y E + EL E
Sbjct: 351 VFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 84/171 (49%), Gaps = 1/171 (0%)
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P T+ I+ +C+ ++ +A +EM+ GF CV++Y+++I Y + ++
Sbjct: 222 PNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEM 281
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+++M+ G PN Y +++ +K + ++ MKR PD + Y +I ++
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 524 AGEFETCTELFNEYRINGGV-IDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
AG E +F GV I+ + M+ ++ + D+ ++LL++M+
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEME 392
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/363 (19%), Positives = 158/363 (43%), Gaps = 26/363 (7%)
Query: 234 IMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVM 293
++ Y+K E K+F + R+ + L + R +AL +F M
Sbjct: 101 LLNMYAKCGSLEEARKVFEKMPQRDF--------VTWTTLISGYSQHDRPCDALLFFNQM 152
Query: 294 TKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL--KLVIMYVEEDL 351
+ G + + + A+ + G L + D V++ L+ +Y L
Sbjct: 153 LRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGF-DSNVHVGSALLDLYTRYGL 211
Query: 352 LEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYAS 411
++ V +A++ + D A++ G ++R G A+ ++ ++ G+ P +YAS
Sbjct: 212 MDDAQLVFDALESRN----DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYAS 267
Query: 412 VINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG 471
+ A + + V M + G A ++++ MY +SG + +A K+ ++ +R
Sbjct: 268 LFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKR- 326
Query: 472 CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
+V +NSL+ + + ++ + EM+R + P+++S+ S++ A S +G +
Sbjct: 327 ---DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW 383
Query: 532 ELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
+ + +G V + +V + + G +++ ++ +++M +E T + W A
Sbjct: 384 HYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPT-------AAIWKAL 436
Query: 592 IEA 594
+ A
Sbjct: 437 LNA 439
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 112/234 (47%), Gaps = 21/234 (8%)
Query: 305 STLICSFASLHKVGEVEELLR------EAKSRTKIKDPEVYLKLVIMYVEEDLLE--KTL 356
S L+C A K G EE L + R K E + L E ++ E
Sbjct: 143 SILLCKIA---KFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIF 199
Query: 357 EVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAY 416
E + + + DVK + +L GF + +A Y +++ +G++P VTY I+ +
Sbjct: 200 EKLHSRFNPDVKTMNILLL----GFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGF 255
Query: 417 CRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMK---LVAKMKERGCK 473
C+ + +A ++FE+M++ FD V +++I +G SG RN +K L ++ +RG
Sbjct: 256 CKKRNFGEALRLFEDMDRLDFDITVQILTTLI--HG-SGVARNKIKARQLFDEISKRGLT 312
Query: 474 PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
P+ YN+L+ + ++ K+ EM+ + + PD V++ SM K+ EF
Sbjct: 313 PDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEF 366
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 104/517 (20%), Positives = 212/517 (41%), Gaps = 49/517 (9%)
Query: 106 LAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKL 165
LA ++ +P + + + + + L +++ + ++ + K +L D + L
Sbjct: 64 LALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSL 123
Query: 166 IEFCIRQRKFKIAETLLN-AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSV 224
I+ + RK + A +L AF + E+ L + +F K++ V
Sbjct: 124 IDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGV 183
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC-ESLGKCGRV 283
L++ G+ + + + + +++L E + NL + G I +L SL KC R
Sbjct: 184 SLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNIN----GSIIALLILHSLCKCSRE 239
Query: 284 SEA---LEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
+A LE R + K F + Y + +F + E + +L++ + Y
Sbjct: 240 MDAFYILEELRNIDCKPDFMA--YRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYR 297
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA---------- 390
++ + L + EV E + + + +L A++ S SA
Sbjct: 298 AFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTG 357
Query: 391 ------------------------VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAE 426
++AYE L S+GY +Y+ +I+ C+ + ++
Sbjct: 358 KLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESY 417
Query: 427 KVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMH 486
+EM+++G V Y+++I ++ +R A KL +M GCK N+ YN LI
Sbjct: 418 TALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKL 477
Query: 487 GREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE--YRINGGVI 544
E + +L+++M R + PD+ Y S+I K + E E+F + R + V
Sbjct: 478 SEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVT 537
Query: 545 DRAMAGIMVGVFSK--VGQIDQLVKLLQDMKMEGTRL 579
R ++ ++ + S G+ QL++ + ++ G +
Sbjct: 538 RRVLSEFVLNLCSNGHSGEASQLLREREHLEHTGAHV 574
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 147/353 (41%), Gaps = 44/353 (12%)
Query: 219 LKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLG 278
++ N V+DS S + Y+ D + ++F E + + +L L
Sbjct: 120 IRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK--------ALFWNILMNELA 171
Query: 279 KCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPE 337
K G S ++ F+ M G+ +S +S + SF+SL V E+L +
Sbjct: 172 KSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNS 231
Query: 338 VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR----- 392
V LV Y++ ++ +V + M + DV + ++ V+ +G S V+
Sbjct: 232 VGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 393 ---------------AYEKLISQGYEPGQVTYA-----------SVINAYCRLSQYNKAE 426
A +LIS G + ++++ Y + + A+
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAK 351
Query: 427 KVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMH 486
VF EM D+ VV+Y+SMI Y R G A+KL +M+E G P+V+ ++++
Sbjct: 352 AVFREMS----DRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCC 407
Query: 487 GREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI 539
R + L + +++ +K + D +++ Y+K G + +F+E R+
Sbjct: 408 ARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 140/309 (45%), Gaps = 22/309 (7%)
Query: 234 IMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVM 293
+++ YSK D +S +F E R++ Y I G E L EA++ F M
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVS---YTSMIAGYAREGLA-----GEAVKLFEEM 388
Query: 294 TKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTK-IKDPEVYLKLVIMYVEEDLL 352
++GI T + + + ++ LL E K + IK+ ++ + + D+
Sbjct: 389 EEEGISPDVYTVTAVLNCCARYR------LLDEGKRVHEWIKENDLGFDIFVSNALMDMY 442
Query: 353 EKTLEVVEA-MKDADVKVCDCM-LCAVVNGFSKRRGFSAAVRAYEKLISQG-YEPGQVTY 409
K + EA + ++++V D + ++ G+SK + A+ + L+ + + P + T
Sbjct: 443 AKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTV 502
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE 469
A V+ A LS ++K ++ + + G+ +S++ MY + G L A L +
Sbjct: 503 ACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFET 529
+ ++ + +I +G ++ L+N+M++ + D++S+ S++ A S +G +
Sbjct: 563 K----DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDE 618
Query: 530 CTELFNEYR 538
FN R
Sbjct: 619 GWRFFNIMR 627
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 174/422 (41%), Gaps = 35/422 (8%)
Query: 163 SKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSN 222
+ L+ F ++ ++ A + F +E V ++ S + Y + + + VF ++ +
Sbjct: 234 NSLVAFYLKNQRVDSARKV---FDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVS 290
Query: 223 SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGR 282
+ +D + I+ ++ D ++ L S ++ + L + KCG
Sbjct: 291 GIEID---LATIVSVFAGCAD-SRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGD 346
Query: 283 VSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKL 342
+ A FR M+ + + Y+++I +A GE +L E + P+VY
Sbjct: 347 LDSAKAVFREMSDRSVVS---YTSMIAGYAREGLAGEAVKLFEEMEEEGI--SPDVYTVT 401
Query: 343 VIMY--VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
++ LL++ V E +K+ D+ + A+++ ++K +++ E + S+
Sbjct: 402 AVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK----CGSMQEAELVFSE 457
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEM-EQKGFD------KCVVAYSSMIVMYGR 453
+++ ++I Y + N+A +F + E+K F CV+ + + + +
Sbjct: 458 MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDK 517
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
+ + +R V NSL+DM+ + L L++++ + D VS
Sbjct: 518 GREIHGYIMRNGYFSDRH------VANSLVDMYAKCGALLLAHMLFDDI----ASKDLVS 567
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
+T MI Y G + LFN+ R G D ++ S G +D+ + M+
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 574 ME 575
E
Sbjct: 628 HE 629
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
VVNG+ K A+R Y+++ + +P T+ +IN YCR S+++ A +F EM++K
Sbjct: 198 TVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEK 257
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G + VV+++++I + SG++ +K+ +M E GC+ + L+D RE +
Sbjct: 258 GCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDA 317
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
L ++ ++V P + Y S++ + E+ E G +V
Sbjct: 318 CGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEG 377
Query: 556 FSKVGQIDQLVKLLQDMKMEGTRLDQ 581
K G+ ++ ++ M G D
Sbjct: 378 LRKSGRTEKASGFMEKMMNAGILPDS 403
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 90/185 (48%), Gaps = 7/185 (3%)
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA-YSSMIVMYGRSGRLRNAMKLV 464
+ + S I+AYCR + + A F+ M++ K V Y++++ Y +SG + A++
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
+M + KP+V +N LI+ + R L+ EMK + P+ VS+ ++I + +
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 525 GEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
G+ E ++ E G A I+V + G++D L+ D+ L++R+
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDL------LNKRVL 330
Query: 585 QSAWN 589
S ++
Sbjct: 331 PSEFD 335
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/281 (19%), Positives = 120/281 (42%), Gaps = 2/281 (0%)
Query: 257 RNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTK-KGIFESSVYSTLICSFASLH 315
+ L D K +G +Y + K G + +AL +++ M K + + ++ LI +
Sbjct: 184 KRLIDGKPNVG-VYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSS 242
Query: 316 KVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
K +L RE K + + + L+ ++ +E+ +++ M + + +
Sbjct: 243 KFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCE 302
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+V+G + A L+++ P + Y S++ C ++ +A ++ EE+ +K
Sbjct: 303 ILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKK 362
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G C +A ++++ +SGR A + KM G P+ +N L+ +
Sbjct: 363 GQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDA 422
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
+L + PD+ +Y ++ ++K G + L NE
Sbjct: 423 NRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNE 463
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 3/110 (2%)
Query: 376 AVVNGFSKRRGFSAAVRAYE--KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
+ ++ + + R A+ A++ K + G +P Y +V+N Y + +KA + ++ M
Sbjct: 162 SAIDAYCRARKMDYALLAFDTMKRLIDG-KPNVGVYNTVVNGYVKSGDMDKALRFYQRMG 220
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
++ V ++ +I Y RS + A+ L +MKE+GC+PNV +N+LI
Sbjct: 221 KERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 127/329 (38%), Gaps = 47/329 (14%)
Query: 196 FGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRG----YSHIMEAYSKLDDCESVVKLF 251
F SA+ Y + +L F+ +K ++D + Y+ ++ Y K D + ++
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKR---LIDGKPNVGVYNTVVNGYVKSGDMDKALR-- 214
Query: 252 HEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICS 310
F R ++ + + +L + + AL+ FR M +KG + V ++TLI
Sbjct: 215 --FYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRG 272
Query: 311 FASLHKVGE-----------------------VEELLREAK------------SRTKIKD 335
F S K+ E V+ L RE + ++ +
Sbjct: 273 FLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPS 332
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYE 395
Y LV E+ + +E++E + C +V G K A E
Sbjct: 333 EFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFME 392
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
K+++ G P VT+ ++ C A ++ KG++ Y ++ + + G
Sbjct: 393 KMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLID 484
R + LV +M ++ P+++ YN L+D
Sbjct: 453 RRKEGEVLVNEMLDKDMLPDIFTYNRLMD 481
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 109/223 (48%), Gaps = 5/223 (2%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQ---GYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
++ G+ K + R E + Q P +VTY +V++A+ ++A +V EM
Sbjct: 420 LMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMA 479
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE-RGCKPNVWVYNSLIDMHGREKNL 492
+ G + Y+ ++ Y + ++ A L+ +M E G +P+V YN +ID +
Sbjct: 480 RMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDS 539
Query: 493 RQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV-IDRAMAGI 551
+NEM+ R +AP K+SYT+++ A++ +G+ + +F+E + V +D +
Sbjct: 540 AGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNM 599
Query: 552 MVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
+V + ++G I+ +++ MK G + Y S N +A
Sbjct: 600 LVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQA 642
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 130/309 (42%), Gaps = 52/309 (16%)
Query: 213 VLVFEKLKSNSV-------------VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNL 259
V VF+KL NSV DSR Y+ +M+ Y K ++ ++
Sbjct: 386 VDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDD 445
Query: 260 RDSKRYLGQI-YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKV 317
R+S + ++ Y + + G + A + M + G+ + + Y+ L+ + ++
Sbjct: 446 RNS--HPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQI 503
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV 377
E+LLRE I+ V ++I D + + D
Sbjct: 504 DRAEDLLREMTEDAGIEPDVVSYNIII-------------------DGCILIDDS----- 539
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF 437
+ A+ + ++ ++G P +++Y +++ A+ Q A +VF+EM
Sbjct: 540 ----------AGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 438 DKC-VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
K ++A++ ++ Y R G + +A ++V++MKE G PNV Y SL + + +
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 497 KLWNEMKRR 505
LW E+K R
Sbjct: 650 LLWKEIKER 658
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 123/311 (39%), Gaps = 11/311 (3%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKS 329
+ +L ++L KCG V E R M + +++ ++ L + + + +LL E
Sbjct: 237 FNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIE 296
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVE-------AMKDADVKVCDCMLCAVVNGFS 382
+ Y + + + ++++ ++ + A+ K M+ A+
Sbjct: 297 AGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDK 356
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
F R +IS G P TY VI C + ++A K +EM KG+ +V
Sbjct: 357 AEECFELIGR----MISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIV 412
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
Y+ + + + + A+KL +M E C P+V YN LI M + W EM
Sbjct: 413 TYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM 472
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
+R D +Y +MI + L E G + + + S+VG +
Sbjct: 473 DKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNL 532
Query: 563 DQLVKLLQDMK 573
+ K+ + MK
Sbjct: 533 KAIHKVSEHMK 543
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
Query: 311 FASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVC 370
A + ++E L+ K+ KIK+ Y L+ Y + + + E M
Sbjct: 77 LAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRS 136
Query: 371 DCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYE---PGQVTYASVINAYCRLSQYNKAEK 427
A++N + F + +++ I Q Y P +++Y +I +YC KA +
Sbjct: 137 AVSFNALLNACLHSKNFDKVPQLFDE-IPQRYNKIIPDKISYGILIKSYCDSGTPEKAIE 195
Query: 428 VFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHG 487
+ +M+ KG + +A+++++ + G L A L +M ++GC+ + YN I M
Sbjct: 196 IMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI-MSA 254
Query: 488 REKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
++++ ++++L EM + PD +SY ++ AY + G + +++
Sbjct: 255 QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVY 301
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 122/274 (44%), Gaps = 15/274 (5%)
Query: 167 EFCIRQ----RKFKIAETLLNAFKSDSEVAVFAFGSAL-RNYNKLHMFRRTVLVFEKLKS 221
E +R+ R+F ETL+ + K+D ++ F S L R+Y + MF + FE++
Sbjct: 71 ELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQ 130
Query: 222 NSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI-YGVLCESLGKC 280
+ ++ ++ A + + V +LF E R +K +I YG+L +S
Sbjct: 131 YGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRY---NKIIPDKISYGILIKSYCDS 187
Query: 281 GRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVE---ELLREAKSRTKIKDPE 337
G +A+E R M KG+ +++ T I S SL+K GE+E L E + D
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILS--SLYKKGELEVADNLWNEMVKKGCELDNA 245
Query: 338 VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKL 397
Y + IM +++ E+ E++E M +K ++ + +R A + YE L
Sbjct: 246 AY-NVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGL 304
Query: 398 ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEE 431
P T+ ++I C Y + +F++
Sbjct: 305 EGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKK 338
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 92/202 (45%), Gaps = 8/202 (3%)
Query: 390 AVRAYEKLISQGYEPGQVTYASVIN----AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
A++ Y + P YA + A CR +++ E + E + K YS
Sbjct: 49 ALKIYANVSDHSASPVSSRYAQELTVRRLAKCR--RFSDIETLIESHKNDPKIKEEPFYS 106
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
++I YG++ +AM+ +M + G + +N+L++ KN ++ +L++E+ +R
Sbjct: 107 TLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQR 166
Query: 506 --KVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
K+ PDK+SY +I +Y +G E E+ + + G + ++ K G+++
Sbjct: 167 YNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELE 226
Query: 564 QLVKLLQDMKMEGTRLDQRLYQ 585
L +M +G LD Y
Sbjct: 227 VADNLWNEMVKKGCELDNAAYN 248
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 96/201 (47%), Gaps = 3/201 (1%)
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y+++I +Y + S +N A + FE+M+Q G + V++++++ S +L ++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 469 ERGCK--PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
+R K P+ Y LI + + ++ +M+ + + +++T+++ + K GE
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 527 FETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
E L+NE G +D A + + K +++ +L+++M G + D Y
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNY 283
Query: 587 AWNAFIEAGLQLQAKWLQESF 607
A+ E G+ +AK + E
Sbjct: 284 LMTAYCERGMLDEAKKVYEGL 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 91/217 (41%), Gaps = 4/217 (1%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
Y L S G+ + A+ F M + G S+V ++ L+ + +V +L E
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 329 SRTK--IKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRG 386
R I D Y L+ Y + EK +E++ M+ ++V +++ K+
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
A + +++ +G E Y I + + S + +++ EEM G ++Y+
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNY 283
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
++ Y G L A K+ ++ C PN + +LI
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 154/354 (43%), Gaps = 9/354 (2%)
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
DSR Y+ +M +K E++V + E ++ L + + + ++ +A
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-----LTMETFTIAMKAFAAAKERKKA 248
Query: 287 LEYFRVMTKKGIFESSVYSTLICSFASL--HKVGEVEELLREAKSRTKIKDPEVYLKLVI 344
+ F +M KK F+ V T+ C SL K+G+ ++L + + Y L+
Sbjct: 249 VGIFELM-KKYKFKIGV-ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 306
Query: 345 MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEP 404
+ L + + M D +K ++ G + R S A++ + + S+G P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 405 GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLV 464
+Y +I +C+ S A + F++M G Y+ +I +G +L +L+
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 426
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
+M+E+G P+ YN+LI + +K +++N+M + ++ P ++ ++ +Y A
Sbjct: 427 KEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMA 486
Query: 525 GEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
+E ++ E G D +++ G+ + + L++M +G +
Sbjct: 487 RNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMK 540
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 2/211 (0%)
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+K R F V E++ ++G + T+ + A+ + KA +FE M++ F
Sbjct: 205 LAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG 263
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
V + ++ GR+ + A L K+KER PN+ Y L++ R +NL + ++WN
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
+M + + PD V++ M+ ++ + +LF+ + G + IM+ F K
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 561 QIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
++ ++ DM G + D +Y F
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGF 413
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/297 (18%), Positives = 121/297 (40%), Gaps = 5/297 (1%)
Query: 161 TCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLK 220
T + L++ R + K A+ L + K + + L + ++ ++ +
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 221 SNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKC 280
+ D ++ ++E + +KLFH +S+ + R Y ++ K
Sbjct: 326 DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS----YTIMIRDFCKQ 381
Query: 281 GRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
+ A+EYF M G+ +++VY+ LI F + K+ V ELL+E + + D + Y
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
L+ + + + E + M +++ ++ + R + +E++I
Sbjct: 442 NALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIK 501
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
+G P +Y +I + +A + EEM KG ++ Y+ + R G+
Sbjct: 502 KGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 100/200 (50%), Gaps = 2/200 (1%)
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEM-EQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
Y P +TY +IN C+ ++A F +M EQK +V Y++++ + G + +A
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPD-IVTYNTVLGAMSKEGMVDDA 403
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
++L+ +K C P + YNS+ID ++ +++ +L+++M + PD ++ S+I
Sbjct: 404 IELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYG 463
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
+ +A E ++ E G I + +++ K +I+ +++++ M G + D
Sbjct: 464 FCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Query: 581 QRLYQSAWNAFIEAGLQLQA 600
+ +Y + E G+ +A
Sbjct: 524 ETIYTAIVKGVEEMGMGSEA 543
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/259 (18%), Positives = 96/259 (37%), Gaps = 35/259 (13%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++ K+ A+ E + G P +TY +VI +A + +++ Q G
Sbjct: 180 IIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNG 239
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR--- 493
++ Y+ ++ + R A++++ M GC P++ YNSL++ + R NL
Sbjct: 240 CPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVA 299
Query: 494 --------------------------------QLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
++E++ N M + P ++Y +I
Sbjct: 300 SVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGL 359
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
KA + F + + D ++G SK G +D ++LL +K
Sbjct: 360 CKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGL 419
Query: 582 RLYQSAWNAFIEAGLQLQA 600
Y S + + GL +A
Sbjct: 420 ITYNSVIDGLAKKGLMKKA 438
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/215 (17%), Positives = 85/215 (39%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+++ + A + E + P + ++++ R+ Q +KA + M G
Sbjct: 110 ILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSG 169
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ Y+ +I + G +R A+ L+ M G P+V YN++I N Q
Sbjct: 170 GVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAI 229
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
+ W + + P ++YT ++ + E+ + + G D +V
Sbjct: 230 RFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYN 289
Query: 557 SKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAF 591
+ G ++++ ++Q + G L+ Y + ++
Sbjct: 290 CRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSL 324
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 173/439 (39%), Gaps = 28/439 (6%)
Query: 112 QRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFC-- 169
Q D P RP+ +IR R + L + + ++ V PD T L++ C
Sbjct: 74 QVFDDLP--RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 170 ---IRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVL 226
++ +F A+ F +D VF + Y K VFE L +
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDAD----VFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI 187
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLCESLGKCGRVSE 285
S ++ I+ AY++ + +++F + +++ D + + C K GR
Sbjct: 188 VS--WTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIH 245
Query: 286 ALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVI 344
A + K G+ E + +L +A +V + L + KS I ++ ++
Sbjct: 246 A-----SVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLI----LWNAMIS 296
Query: 345 MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEP 404
Y + + +++ M + DV+ + + ++ ++ A YE + Y
Sbjct: 297 GYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD 356
Query: 405 GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLV 464
+++I+ + + A VF+ + D+ VV +S+MIV YG GR R A+ L
Sbjct: 357 DVFISSALIDMFAKCGSVEGARLVFD----RTLDRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
M+ G PN + L+ +R+ +N M K+ P + Y +I +A
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRA 472
Query: 525 GEFETCTELFNEYRINGGV 543
G + E+ + GV
Sbjct: 473 GHLDQAYEVIKCMPVQPGV 491
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 171/388 (44%), Gaps = 57/388 (14%)
Query: 158 DGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFE 217
DG +KLI F A+ +L +S + +++F S + K +F +++ VF
Sbjct: 49 DGYISAKLIASYSNYNCFNDADLVL---QSIPDPTIYSFSSLIYALTKAKLFTQSIGVFS 105
Query: 218 KLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESL 277
++ S+ ++ DS ++ + ++L + V K H + D + + G +
Sbjct: 106 RMFSHGLIPDSHVLPNLFKVCAELSAFK-VGKQIHCVSCVSGLDMDAF---VQGSMFHMY 161
Query: 278 GKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPE 337
+CGR+ +A + F M+ K + S L+C++A + G +EE++R
Sbjct: 162 MRCGRMGDARKVFDRMSDKDVVTCS---ALLCAYA---RKGCLEEVVR------------ 203
Query: 338 VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKL 397
++ M+ + ++ +++GF++ AV ++K+
Sbjct: 204 --------------------ILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Query: 398 ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGF--DKCVVAYSSMIVMYGRSG 455
G+ P QVT +SV+ + N + + ++G DKCV+ S+MI MYG+SG
Sbjct: 244 HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI--SAMIDMYGKSG 301
Query: 456 RLRNAMKLVAK--MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
+ + L + M E G V N+ I R + + +++ K + + + VS
Sbjct: 302 HVYGIISLFNQFEMMEAG------VCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVS 355
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRING 541
+TS+I ++ G+ ELF E ++ G
Sbjct: 356 WTSIIAGCAQNGKDIEALELFREMQVAG 383
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/470 (20%), Positives = 184/470 (39%), Gaps = 72/470 (15%)
Query: 153 YHVLPDGATCSKLIEFCIRQRKFKIAETL-LNAFKSDSEVAVFAFGSALRNYNKLHMFRR 211
+ ++PD L + C FK+ + + + S ++ F GS Y +
Sbjct: 110 HGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGD 169
Query: 212 TVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYG 271
VF+++ VV S ++ AY++ E VV++ E ES + + + G
Sbjct: 170 ARKVFDRMSDKDVVT----CSALLCAYARKGCLEEVVRILSEMESSGIEAN---IVSWNG 222
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAK--- 328
+L + G EA+ F+ + G V + + L VG+ E+L +
Sbjct: 223 IL-SGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSV-----LPSVGD-SEMLNMGRLIH 275
Query: 329 ----SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKR 384
+ +KD V ++ MY + + + + + + VC+ A + G S+
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCN----AYITGLSRN 331
Query: 385 RGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAY 444
A+ +E Q E V++ S+I + + +A ++F EM+ G V
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 445 SSM-----------------------------------IVMYGRSGRLRNAMKLVAKMKE 469
SM I MY + GR+ N ++V M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRI-NLSQIVFNMMP 450
Query: 470 RGCKPNVWVYNSLID---MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
N+ +NSL++ MHG+ K ++ ++ + R ++ PD +S+TS++ A + G
Sbjct: 451 ---TKNLVCWNSLMNGFSMHGKAK---EVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 527 FETCTELFNEYRINGGVIDR-AMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
+ + F G+ R MV + + G++ + L+++M E
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFE 554
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 92/195 (47%), Gaps = 6/195 (3%)
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
VT ++++ AY R + ++ EME G + +V+++ ++ + RSG + A+ + K
Sbjct: 183 VTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQK 242
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
+ G P+ +S++ G + L + + ++ + DK ++MI Y K+G
Sbjct: 243 IHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGH 302
Query: 527 FETCTELFNEYR-INGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
LFN++ + GV + + G+ S+ G +D+ +++ + K + L+ +
Sbjct: 303 VYGIISLFNQFEMMEAGVCNAYITGL-----SRNGLVDKALEMFELFKEQTMELNVVSWT 357
Query: 586 SAWNAFIEAGLQLQA 600
S + G ++A
Sbjct: 358 SIIAGCAQNGKDIEA 372
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 141/348 (40%), Gaps = 12/348 (3%)
Query: 193 VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFH 252
V ++ LR + +F + V + + V D + M+++ ++ ++LF
Sbjct: 151 VGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFE 210
Query: 253 EFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFA 312
E ES ++ S + LCE VS A F F+S Y+ +I ++
Sbjct: 211 ESESFGVKCSTESFNALLRCLCER----SHVSAAKSVFNAKKGNIPFDSCSYNIMISGWS 266
Query: 313 SLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD----ADVK 368
L +V E+E++L+E D Y L+ + ++E+ + +K D
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
V + M+C F R F ++R Y +++ + EP TY+ +++ + + + A ++
Sbjct: 327 VYNAMIC----NFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEI 382
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR 488
FEEM +G +S + G AM + K ++ GC+ + Y L+ R
Sbjct: 383 FEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442
Query: 489 EKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
L +W+EM+ D Y ++ G E + E
Sbjct: 443 FGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEE 490
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 136/317 (42%), Gaps = 2/317 (0%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAK 328
Y V+ +LG+ S ++ + M +G+ + + + SF +H V EL E++
Sbjct: 154 YSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESE 213
Query: 329 SRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFS 388
S E + L+ E + V A K ++ C +++G+SK
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNA-KKGNIPFDSCSYNIMISGWSKLGEVE 272
Query: 389 AAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
+ ++++ G+ P ++Y+ +I R + N + ++F+ ++ KG Y++MI
Sbjct: 273 EMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMI 332
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
+ + +M+ +M + C+PN+ Y+ L+ + + + +++ EM R V
Sbjct: 333 CNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVL 392
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKL 568
P TS + G ++ + R G I + +++ S+ G+ L+ +
Sbjct: 393 PTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNV 452
Query: 569 LQDMKMEGTRLDQRLYQ 585
+M+ G D +Y+
Sbjct: 453 WDEMQESGYPSDVEVYE 469
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/430 (21%), Positives = 169/430 (39%), Gaps = 47/430 (10%)
Query: 108 FDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIE 167
FD+ R P + + ++R L R K + F++ V + V PD + ++
Sbjct: 138 FDWAVR---EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMD 194
Query: 168 FCIRQRKFKIAETLLNAFKS-DSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVL 226
+R + A L +S + + +F + LR + VF K N +
Sbjct: 195 SFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGN-IPF 253
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEF-ESRNLRDSKRYLGQIYGVLCESLGKCGRVSE 285
DS Y+ ++ +SKL + E + K+ E ES D Y L E LG+ GR+++
Sbjct: 254 DSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSY-----SHLIEGLGRTGRIND 308
Query: 286 ALEYFRVMTKKG-IFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVI 344
++E F + KG + +++VY+ +IC+F S E R + E Y KLV
Sbjct: 309 SVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV- 367
Query: 345 MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEP 404
+G K R S A+ +E+++S+G P
Sbjct: 368 ----------------------------------SGLIKGRKVSDALEIFEEMLSRGVLP 393
Query: 405 GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLV 464
S + C + A ++++ + G AY ++ R G+ + +
Sbjct: 394 TTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVW 453
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
+M+E G +V VY ++D +L + E R+ P++ Y+ + +
Sbjct: 454 DEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMAS 513
Query: 525 GEFETCTELF 534
+ E +LF
Sbjct: 514 NKTELAYKLF 523
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 86/183 (46%)
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
A+R E ++S G P Y ++N C+ A ++ E+ME G+ V Y++++
Sbjct: 125 AIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVR 184
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
G L +++ V ++ ++G PN + Y+ L++ +E+ + KL +E+ + P
Sbjct: 185 GLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEP 244
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
+ VSY ++ + K G + LF E G + I++ G+ ++ LL
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 570 QDM 572
+M
Sbjct: 305 AEM 307
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 120/272 (44%), Gaps = 15/272 (5%)
Query: 308 ICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADV 367
+C L K V EL+ S I D Y LV + + +++VE M+D
Sbjct: 116 LCKANRLKKAIRVIELM---VSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGY 172
Query: 368 KVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEK 427
A+V G + +++ E+L+ +G P TY+ ++ A + ++A K
Sbjct: 173 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVK 232
Query: 428 VFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHG 487
+ +E+ KG + +V+Y+ ++ + + GR +AM L ++ +G K NV YN L+
Sbjct: 233 LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 488 REKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE-------YRIN 540
+ + L EM AP V+Y +I + + G E ++ E +R+
Sbjct: 293 CDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVT 352
Query: 541 GGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
+ +A + K G++D +VK L +M
Sbjct: 353 ATSYNPVIARL-----CKEGKVDLVVKCLDEM 379
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 90/195 (46%)
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
S S + E L++ G++P ++ C+ ++ KA +V E M G
Sbjct: 82 SDEPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDA 141
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
AY+ ++ + G + AM+LV KM++ G N YN+L+ +L Q +
Sbjct: 142 SAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVER 201
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
+ ++ +AP+ +Y+ ++ A K + +L +E + GG + +++ F K G+
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 562 IDQLVKLLQDMKMEG 576
D + L +++ +G
Sbjct: 262 TDDAMALFRELPAKG 276
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/437 (20%), Positives = 167/437 (38%), Gaps = 50/437 (11%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVA-VFAFGSALRNYNKLHMFRRTV 213
++PD + + L+ ++ A L+ + + + + +R L +++
Sbjct: 137 IIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSL 196
Query: 214 LVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVL 273
E+L + ++ YS ++EA K + VKL E + + Y VL
Sbjct: 197 QFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVS----YNVL 252
Query: 274 CESLGKCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRT 331
K GR +A+ FR + KG F+++V Y+ L+ + E LL E
Sbjct: 253 LTGFCKEGRTDDAMALFRELPAKG-FKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 332 KIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDAD--VKVCDCMLCAVVNGFSKRRGFSA 389
+ Y L+ E+ L+V++ M + +V V+ K
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDL 371
Query: 390 AVRAYEKLISQGYEPGQVT-----------------------------------YASVIN 414
V+ +++I + +P + T Y SVI
Sbjct: 372 VVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVIT 431
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE-RGCK 473
+ CR A ++ EM + GFD YS++I G AM++++ M+E CK
Sbjct: 432 SLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCK 491
Query: 474 PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTEL 533
P V +N++I + + +++ M +K P++ +Y ++ + E E E+
Sbjct: 492 PTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEV 551
Query: 534 FNEYR----INGGVIDR 546
+E R I +DR
Sbjct: 552 LDELRLRKVIGQNAVDR 568
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 135/281 (48%), Gaps = 21/281 (7%)
Query: 299 FESSVY--STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTL 356
F+SSV+ + LI + S +G+ ++ E +KD V+ L+ Y + +++
Sbjct: 147 FDSSVHVVTGLIQMYFSCGGLGDARKMFDE----MLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 357 EVVEAMKDADVKVC----DCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASV 412
++E M C + V++G++K S A+ +++++ + EP +VT +V
Sbjct: 203 SLLEMMP------CWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAV 256
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
++A L E++ ++ +G ++ V +++I MY +SG + A+ + + ER
Sbjct: 257 LSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNER-- 314
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
NV + ++I + + ++N M + V P+ V++ +++ A S G +
Sbjct: 315 --NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKR 372
Query: 533 LFNEYRINGGV-IDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
LFN R G+ + G M+ + + G++ + ++++ M
Sbjct: 373 LFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 124/277 (44%), Gaps = 19/277 (6%)
Query: 279 KCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEV---EELLREAKSRTKIKD 335
K GR SEA+E F+ M + + V TL+ ++ +G + E + R +
Sbjct: 227 KSGRASEAIEVFQRMLMENVEPDEV--TLLAVLSACADLGSLELGERICSYVDHRGMNRA 284
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYE 395
+ ++ MY + + K L+V E + + +V ++ G + + A+ +
Sbjct: 285 VSLNNAVIDMYAKSGNITKALDVFECVNERNV----VTWTTIIAGLATHGHGAEALAMFN 340
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAYSSMIVMYGRS 454
+++ G P VT+ ++++A + + +++F M K G + Y MI + GR+
Sbjct: 341 RMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRA 400
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV-S 513
G+LR A +++ M K N ++ SL+ +L E+ +E+ K+ P+ +
Sbjct: 401 GKLREADEVIKSMP---FKANAAIWGSLLAASNVHHDLELGERALSELI--KLEPNNSGN 455
Query: 514 YTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAG 550
Y + YS G ++ + N + G+ + MAG
Sbjct: 456 YMLLANLYSNLGRWDESRMMRNMMK---GIGVKKMAG 489
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/305 (18%), Positives = 134/305 (43%), Gaps = 1/305 (0%)
Query: 302 SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEA 361
+VY + A+ K VEE+L E + +++ +Y + E +V +
Sbjct: 72 AVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDE 131
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ-GYEPGQVTYASVINAYCRLS 420
M + + K A++N + F +++L + EP +Y ++I C
Sbjct: 132 MPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKG 191
Query: 421 QYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYN 480
+ +A + +E+E KG + ++ ++ G+ ++ A+M E+ K ++ YN
Sbjct: 192 SFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYN 251
Query: 481 SLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRIN 540
+ + E ++ L++++K ++ PD ++T+MI + G+ + + E N
Sbjct: 252 ARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 541 GGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
G + + ++ K G ++ +L +++ + +D+ + Q +A ++ Q +A
Sbjct: 312 GCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Query: 601 KWLQE 605
+ + E
Sbjct: 372 EEIVE 376
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 185/434 (42%), Gaps = 38/434 (8%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEV-AVFAFGSALRNYNKLHMFRRTVLV 215
P +T LI+ C + R + + + ++ V + + LR Y K V
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCE 275
F+++ + + ++ ++ Y+++ E KLF E + DS + + G +
Sbjct: 143 FDEMPNRDLC----SWNVMVNGYAEVGLLEEARKLFDEMTEK---DSYSWTAMVTGYV-- 193
Query: 276 SLGKCGRVSEALEYFRVM-----TKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSR 330
K + EAL + +M ++ IF S+ + + + E+ + A
Sbjct: 194 ---KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLD 250
Query: 331 TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAA 390
+ D ++ L+ MY + +++ + + + + DV M+ R GFS
Sbjct: 251 S---DEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSL- 306
Query: 391 VRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
+ +L+ P + T+A V+NA L+ ++V M + GFD A SS++ M
Sbjct: 307 ---FSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDM 363
Query: 451 YGRSGRLRNAMKLVAKMKERGC-KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
Y + G + +A +V GC KP++ + SLI + + K ++ + + P
Sbjct: 364 YTKCGNIESAKHVV-----DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKP 418
Query: 510 DKVSYTSMIGAYSKAGEFETCTELF----NEYRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
D V++ +++ A + AG E E F ++R++ +V + ++ G+ +QL
Sbjct: 419 DHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH---TSDHYTCLVDLLARSGRFEQL 475
Query: 566 VKLLQDMKMEGTRL 579
++ +M M+ ++
Sbjct: 476 KSVISEMPMKPSKF 489
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 77/394 (19%), Positives = 162/394 (41%), Gaps = 31/394 (7%)
Query: 213 VLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGV 272
VL +KL +V L R Y L S + E + + + R G + G+
Sbjct: 63 VLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEE--GKKVHEHIRTSGFVPGI 120
Query: 273 -----LCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREA 327
L KCG + +A + F M + + ++ ++ +A + + E +L E
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCS---WNVMVNGYAEVGLLEEARKLFDEM 177
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK---- 383
KD + +V YV++D E+ L + M+ + ++ +
Sbjct: 178 TE----KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC 233
Query: 384 -RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
RRG + ++ G + +V ++S+++ Y + ++A +F+++ +K VV
Sbjct: 234 IRRG----KEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD----VV 285
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
+++SMI Y +S R R L +++ +PN + + +++ +++ M
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQI 562
R P + +S++ Y+K G E+ + + D ++G ++ GQ
Sbjct: 346 TRVGFDPYSFASSSLVDMYTKCGNIESAKHVVD----GCPKPDLVSWTSLIGGCAQNGQP 401
Query: 563 DQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
D+ +K + GT+ D + + +A AGL
Sbjct: 402 DEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGL 435
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 182/404 (45%), Gaps = 29/404 (7%)
Query: 204 NKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DS 262
KL + R+ VF +K ++ ++ I+ +Y+KL + + L E E L+ D
Sbjct: 138 GKLELSRK---VFNSMKDRNL----SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDI 190
Query: 263 KRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVE 321
+ + G + L K +A+ + M G+ S S S+L+ + A + ++
Sbjct: 191 VTWNSLLSGYASKGLSK-----DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL-KLG 244
Query: 322 ELLREAKSRTKI-KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNG 380
+ + R ++ D V L+ MY++ L V + M ++ + ++V+G
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWN----SLVSG 300
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
S A ++ +G +P +T+ S+ + Y L + KA V +M++KG
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
VV+++++ ++G RNA+K+ KM+E G PN ++L+ + G L +++
Sbjct: 361 VVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHG 420
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA--GIMVGVFSK 558
R+ + D T+++ Y K+G+ ++ E+F G+ ++++A M+ ++
Sbjct: 421 FCLRKNLICDAYVATALVDMYGKSGDLQSAIEIF------WGIKNKSLASWNCMLMGYAM 474
Query: 559 VGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKW 602
G+ ++ + M G D + S + +GL +Q W
Sbjct: 475 FGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGL-VQEGW 517
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/382 (19%), Positives = 153/382 (40%), Gaps = 21/382 (5%)
Query: 163 SKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSN 222
+ LI+ I+ A + + + + + A+ S + + + + + +++
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDAKN---IVAWNSLVSGLSYACLLKDAEALMIRMEKE 320
Query: 223 SVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGR 282
+ D+ ++ + Y+ L E + + + + + + + I+ K G
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIF----SGCSKNGN 376
Query: 283 VSEALEYFRVMTKKGIF-ESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLK 341
AL+ F M ++G+ ++ STL+ L + +E+ + I D V
Sbjct: 377 FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATA 436
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
LV MY + L+ +E+ +K+ + +CML G++ + A+ ++ G
Sbjct: 437 LVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLM----GYAMFGRGEEGIAAFSVMLEAG 492
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAYSSMIVMYGRSGRLRNA 460
EP +T+ SV++ + K F+ M + G + S M+ + GRSG L A
Sbjct: 493 MEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA 552
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV--APDKVSYTSMI 518
+ M KP+ ++ + + ++L E W KR +V + +Y MI
Sbjct: 553 WDFIQTMS---LKPDATIWGAFLSSCKIHRDLELAEIAW---KRLQVLEPHNSANYMMMI 606
Query: 519 GAYSKAGEFETCTELFNEYRIN 540
YS +E + N R N
Sbjct: 607 NLYSNLNRWEDVERIRNLMRNN 628
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 94/195 (48%), Gaps = 4/195 (2%)
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+D + ++V++ + EK +E+ M+ + K D + ++ S + GF+ +
Sbjct: 52 RDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQI 111
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
+ ++ G E S+I Y R + + KVF M+ D+ + +++S++ Y +
Sbjct: 112 HGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTK 167
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
G + +A+ L+ +M+ G KP++ +NSL+ + + + + M+ + P S
Sbjct: 168 LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 514 YTSMIGAYSKAGEFE 528
+S++ A ++ G +
Sbjct: 228 ISSLLQAVAEPGHLK 242
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 183/419 (43%), Gaps = 30/419 (7%)
Query: 162 CSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKS 221
C + +F FK + ++ E VF + + + + R++ ++ ++
Sbjct: 805 CRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 222 NSVVLDSRGYSHIMEAYSKLDDCESVVKLFHE-FESRNLRDSKRYLGQIYGVLCESLGKC 280
+SV S YS +++A S F E ++ + + +I L +
Sbjct: 865 DSVSPSSYTYSSLVKA-------SSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSAT 917
Query: 281 GRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
GR+ EA + F M ++ + ++T++ ++ + + L + K+
Sbjct: 918 GRIREARKVFDEMPER---DDIAWTTMVSAYRRVLDMDSANSLANQMSE----KNEATSN 970
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
L+ Y+ LE+ + M D+ M + G+S+ + + A+ + K++ +
Sbjct: 971 CLINGYMGLGNLEQAESLFNQMPVKDIISWTTM----IKGYSQNKRYREAIAVFYKMMEE 1026
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G P +VT ++VI+A L ++V Q GF V S+++ MY + G L A
Sbjct: 1027 GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERA 1086
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+ + + K N++ +NS+I+ ++ K++ +M+ V P+ V++ S+ A
Sbjct: 1087 LLVFFNLP----KKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTA 1142
Query: 521 YSKAGEFETCTELF----NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
+ AG + ++ ++Y I V + G MV +FSK G I + ++L+ +M+ E
Sbjct: 1143 CTHAGLVDEGRRIYRSMIDDYSI---VSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE 1198
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 140/333 (42%), Gaps = 27/333 (8%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS-VYSTLI--CSFASLHKVGE-VEELL 324
+Y L + C +LE + M + + SS YS+L+ SFAS + GE ++ +
Sbjct: 838 VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFGESLQAHI 895
Query: 325 REAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKR 384
+ +K + L+ Y + + +V + M + D D +V+ + +
Sbjct: 896 WKFGFGFHVK---IQTTLIDFYSATGRIREARKVFDEMPERD----DIAWTTMVSAYRRV 948
Query: 385 RGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAY 444
+A L +Q E + T +IN Y L +AE +F +M K ++++
Sbjct: 949 LDMDSA----NSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKD----IISW 1000
Query: 445 SSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
++MI Y ++ R R A+ + KM E G P+ +++I L +++ +
Sbjct: 1001 TTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 1060
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFE-TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQID 563
D ++++ YSK G E FN + N + + G+ F++
Sbjct: 1061 NGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQ----- 1115
Query: 564 QLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
+ +K+ M+ME + + + S + A AGL
Sbjct: 1116 EALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%)
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P +TY S+I+ +C+ + + A+++ + M KG VV +S++I Y ++ R+ N M++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+M RG N Y +LI + +L + L NEM VAPD +++ M+
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 524 AGEF 527
E
Sbjct: 128 KKEL 131
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 70/133 (52%)
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
+ Y+SMI + + R+ +A +++ M +GC P+V +++LI+ + + K + +++
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
EM RR + + V+YT++I + + G+ + +L NE G D M+
Sbjct: 70 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 129
Query: 561 QIDQLVKLLQDMK 573
++ + +L+D++
Sbjct: 130 ELRKAFAILEDLQ 142
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 69/129 (53%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++++GF K+ A R + + S+G P VT++++IN YC+ + + ++F EM ++
Sbjct: 15 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 74
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G V Y+++I + + G L A L+ +M G P+ ++ ++ +K LR+
Sbjct: 75 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKA 134
Query: 496 EKLWNEMKR 504
+ ++++
Sbjct: 135 FAILEDLQK 143
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/306 (21%), Positives = 123/306 (40%), Gaps = 42/306 (13%)
Query: 268 QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLR 325
++Y L + + GR A M + V YS LI SF + +V++LL
Sbjct: 186 EVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLS 245
Query: 326 EAKSRTKIKDPEVYLKLVIMYVEEDL---LEKTLEVVEAMKDADVKVCDCMLCAVVNGFS 382
+ + + + Y L+ Y + + +E TL ++ + + D K + + + F
Sbjct: 246 DMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTL--IQMLGEDDCKPDSWTMNSTLRAFG 303
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
YEK S G EP T+ ++++Y + Y K V E M++ + +V
Sbjct: 304 GNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIV 363
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKP---------------------------- 474
Y+ +I +GR+G L+ L M+ P
Sbjct: 364 TYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFI 423
Query: 475 -------NVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
++ +N L+D +GR + +++ + M+++ PDK++Y +M+ AY +G
Sbjct: 424 ENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMT 483
Query: 528 ETCTEL 533
EL
Sbjct: 484 THVKEL 489
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/368 (19%), Positives = 152/368 (41%), Gaps = 51/368 (13%)
Query: 282 RVSEALEYFRVMTKKGIFESSV--YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
R A++ F ++ ++ ++ +V Y LI + + EL +E + + + EVY
Sbjct: 129 RWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVY 188
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDA-----DVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
LV Y + ++E MK + DV ++ + + F+ F
Sbjct: 189 TALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFA----FDKVQDLL 244
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV---AYSSMIVMY 451
+ QG P +TY ++I+AY + + + E +M G D C +S + +
Sbjct: 245 SDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQM--LGEDDCKPDSWTMNSTLRAF 302
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
G +G++ K + G +PN+ +N L+D +G+ N +++ + M++ +
Sbjct: 303 GGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTI 362
Query: 512 VSYTSMIGAYSKAGE----------------FETCTELFNEYRIN---------GGV--- 543
V+Y +I A+ +AG+ F +C L + R GGV
Sbjct: 363 VTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRF 422
Query: 544 -------IDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
+D +V + ++ + ++ +L+ M+ +G + D+ Y++ A+ +G+
Sbjct: 423 IENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM 482
Query: 597 QLQAKWLQ 604
K L
Sbjct: 483 TTHVKELH 490
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 165/410 (40%), Gaps = 49/410 (11%)
Query: 165 LIEFCIRQRKFKIAETLLNAFKSDSEVAVFA----FGSALRNYNKLHMFRRTVLVFEKLK 220
++EF R R +A L + + S V F S +R+Y +F+ +V +F+ +K
Sbjct: 106 MLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMK 165
Query: 221 SNSV------------VLDSRG--------YSHIMEAYSKLDDCESVVKLFHEF------ 254
+ +L RG + + Y D + L + F
Sbjct: 166 QMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMV 225
Query: 255 --ESRNLRDSKRYLGQ----IYGVLCESLGKCGRVSEALEYFRVMTKKG--IFESSV-YS 305
R +D + Y Y + + L + G+V A M KK + + V Y+
Sbjct: 226 DEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYT 285
Query: 306 TLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA 365
TL+ + ++ E + + SR + Y L+ E ++ +++ DA
Sbjct: 286 TLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDA 345
Query: 366 DVKVCD--CMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYN 423
C ++ AA++ ++++++ P +Y+ +I C ++++
Sbjct: 346 FTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFD 405
Query: 424 KAEKVFEEMEQK----GFDKC---VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNV 476
+AE +F E+ +K G D+C AY+ M +G+ + A K+ ++ +RG + +
Sbjct: 406 RAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DP 464
Query: 477 WVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
Y +LI H RE + +L M RR+ PD +Y +I K GE
Sbjct: 465 PSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGE 514
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 124/257 (48%), Gaps = 14/257 (5%)
Query: 325 REAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKR 384
R + K++D + L+ Y L ++++++ + MK + ++++ KR
Sbjct: 128 RRSNGCVKLQD-RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR 186
Query: 385 RGFSAAVRAYEKLI-SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
A ++++ + G P T+ ++IN +C+ S ++A ++F++ME + VV
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKM--KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
Y+++I R+G+++ A +++ M K PNV Y +L+ + ++ + + ++++
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG------VIDRAMAGIMVGV 555
M R + P+ V+Y ++I S+A ++ ++ I G D I++
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDIL----IGGNDAFTTFAPDACTFNILIKA 362
Query: 556 FSKVGQIDQLVKLLQDM 572
G +D +K+ Q+M
Sbjct: 363 HCDAGHLDAAMKVFQEM 379
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 119/277 (42%), Gaps = 14/277 (5%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAK 328
+ L S G G E+++ F+ M + GI S + +++L+ + G +L E +
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 329 SRTKIKDPEVYL--KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCA---VVNGFSK 383
RT P+ Y L+ + + ++++ + KD ++ C+ + +++G +
Sbjct: 201 -RTYGVTPDSYTFNTLINGFCKNSMVDEAFRI---FKDMELYHCNPDVVTYNTIIDGLCR 256
Query: 384 RRGFSAAVRAYEKLISQGYE--PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
A ++ + + P V+Y +++ YC + ++A VF +M +G
Sbjct: 257 AGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNA 316
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKE--RGCKPNVWVYNSLIDMHGREKNLRQLEKLW 499
V Y+++I + R ++ + P+ +N LI H +L K++
Sbjct: 317 VTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVF 376
Query: 500 NEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
EM K+ PD SY+ +I EF+ LFNE
Sbjct: 377 QEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNE 413
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/349 (20%), Positives = 137/349 (39%), Gaps = 14/349 (4%)
Query: 187 SDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCES 246
S E + F L L++ R + E+ + V L R ++ ++ +Y +
Sbjct: 97 SHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQE 156
Query: 247 VVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKK-GIF-ESSVY 304
VKLF + + S + +L K GR A + F M + G+ +S +
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILL----KRGRTGMAHDLFDEMRRTYGVTPDSYTF 212
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM-- 362
+TLI F V E + ++ + D Y ++ ++ V+ M
Sbjct: 213 NTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLK 272
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
K DV +V G+ ++ AV + ++S+G +P VTY ++I +Y
Sbjct: 273 KATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRY 332
Query: 423 NKAEKVF----EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
++ + + + D C ++ +I + +G L AMK+ +M P+
Sbjct: 333 DEIKDILIGGNDAFTTFAPDAC--TFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 390
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEF 527
Y+ LI + E L+NE+ ++V K + AY+ E+
Sbjct: 391 YSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEY 439
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 427 KVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER--GC-KPNVWVYNSLI 483
+ F+ + KGF ++ M+ GR+ L A + ++ R GC K +NSLI
Sbjct: 86 RFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLI 145
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
+G ++ KL+ MK+ ++P +++ S++ K G +LF+E R GV
Sbjct: 146 RSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGV 205
Query: 544 I-DRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
D ++ F K +D+ ++ +DM++ D Y + + AG
Sbjct: 206 TPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA----YS 445
+R ++ + ++G+ + ++ ++ R N A +E++ + CV ++
Sbjct: 84 GLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRS-NGCVKLQDRYFN 142
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
S+I YG +G + ++KL MK+ G P+V +NSL+ + + L++EM+R
Sbjct: 143 SLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRT 202
Query: 506 -KVAPDKVSYTSMIGAYSKAGEFETCTELFNE---YRINGGVI 544
V PD ++ ++I + K + +F + Y N V+
Sbjct: 203 YGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVV 245
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 165/401 (41%), Gaps = 38/401 (9%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
VF L + V+ Y+ +M E ++LF E +DS + I G
Sbjct: 196 VFYGLDDRNTVM----YNSLMGGLLACGMIEDALQLFRGME----KDSVSWAAMIKG--- 244
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
L + G EA+E FR M +G+ + + +++ + L + E +++ RT
Sbjct: 245 --LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQI-HACIIRTNF 301
Query: 334 KDPEVYL--KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAV 391
+D +Y+ L+ MY + L V + MK +V A+V G+ + AV
Sbjct: 302 QD-HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV----VSWTAMVVGYGQTGRAEEAV 356
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
+ + + G +P T I+A +S + + + G V +S++ +Y
Sbjct: 357 KIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
G+ G + ++ +L +M R + + +++ + + + +L+++M + + PD
Sbjct: 417 GKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG 472
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDR-AMAGIMVGVFSKVGQIDQLVKLLQ 570
V+ T +I A S+AG E F G++ M+ +FS+ G++++ ++ +
Sbjct: 473 VTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFIN 532
Query: 571 DMKMEGTRLDQRLYQSAWNAFIEA----GLQLQAKWLQESF 607
M + W + A G KW ES
Sbjct: 533 GMPFPPDAI-------GWTTLLSACRNKGNLEIGKWAAESL 566
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/426 (20%), Positives = 171/426 (40%), Gaps = 81/426 (19%)
Query: 192 AVFAFGSALRNYNKLHMFRRTVLVFEKLKSNS-------------VVLDSRGY----SHI 234
AV A+ + +R+++ ++ R T++ KL S++ + L Y S +
Sbjct: 122 AVKAYNTMMRDFSA-NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPL 180
Query: 235 MEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMT 294
+ Y+ + K+F+ + RN +Y L L CG + +AL+ FR M
Sbjct: 181 LYMYANVGCISDAKKVFYGLDDRNT--------VMYNSLMGGLLACGMIEDALQLFRGME 232
Query: 295 KKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
K +S ++ +I A + L ++
Sbjct: 233 K----DSVSWAAMIKGLA-----------------------------------QNGLAKE 253
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVIN 414
+E MK +K+ +V+ + + + +I ++ +++I+
Sbjct: 254 AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALID 313
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKP 474
YC+ + A+ VF+ M+QK VV++++M+V YG++GR A+K+ M+ G P
Sbjct: 314 MYCKCKCLHYAKTVFDRMKQKN----VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 475 NVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT----SMIGAYSKAGEFETC 530
+ + I N+ LE+ ++ + + + Y S++ Y K G+ +
Sbjct: 370 DHYTLGQAISACA---NVSSLEE-GSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDS 425
Query: 531 TELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNA 590
T LFNE + V A MV +++ G+ + ++L M G + D +A
Sbjct: 426 TRLFNEMNVRDAVSWTA----MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISA 481
Query: 591 FIEAGL 596
AGL
Sbjct: 482 CSRAGL 487
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/409 (19%), Positives = 170/409 (41%), Gaps = 33/409 (8%)
Query: 193 VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFH 252
+F++ + L Y+K + FEKL D ++ ++E YS + VK ++
Sbjct: 72 LFSWNNLLLAYSKAGLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYN 127
Query: 253 EFESRNLRDSKRYLGQIYGVLCESLGKC-GRVSEALEYFRVMTKKGIFESS--VYSTLIC 309
+RD L ++ + L G VS + + K G FES V S L+
Sbjct: 128 TM----MRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLG-FESYLLVGSPLLY 182
Query: 310 SFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKV 369
+A++ + + +++ R + +Y L+ + ++E L++ M+ V
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTV----MYNSLMGGLLACGMIEDALQLFRGMEKDSVSW 238
Query: 370 CDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
+ NG +K A+ + ++ QG + Q + SV+ A L N+ +++
Sbjct: 239 AAMIKGLAQNGLAKE-----AIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIH 293
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
+ + F + S++I MY + L A + +MK++ NV + +++ +G+
Sbjct: 294 ACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQT 349
Query: 490 KNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA 549
+ K++ +M+R + PD + I A + E ++ + +G + ++
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 550 GIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQL 598
+V ++ K G ID +L +M + +W A + A Q
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDA--------VSWTAMVSAYAQF 450
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 12/259 (4%)
Query: 278 GKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
G+ GR EA++ F M + GI + I + A++ + E + +A + I
Sbjct: 347 GQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYV 406
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEK 396
V LV +Y + ++ + + M D A+V+ +++ ++ ++K
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA----VSWTAMVSAYAQFGRAVETIQLFDK 462
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAYSSMIVMYGRSG 455
++ G +P VT VI+A R K ++ F+ M + G + YS MI ++ RSG
Sbjct: 463 MVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSG 522
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP-DKVSY 514
RL AM+ + M P+ + +L+ + NL ++ K W ++ P Y
Sbjct: 523 RLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNL-EIGK-WAAESLIELDPHHPAGY 577
Query: 515 TSMIGAYSKAGEFETCTEL 533
T + Y+ G++++ +L
Sbjct: 578 TLLSSIYASKGKWDSVAQL 596
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 137/342 (40%), Gaps = 13/342 (3%)
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKG--IFESSVYSTLICSFASLHKVGEVEELLREAKS 329
+L E LGK + + LE FR M K+ I ++ VYS LI + L E K+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV-----VNGFSKR 384
D VY L+ ++ K LE V D + C V + F++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 385 RGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAY 444
++ L P T+ V++AY + + E V M ++ +
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 445 SSMIVMYGRSG---RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
+ +I YG+ ++ K + + KE KP + +NS+I +G+ + + + E ++ +
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKE---KPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
M P ++Y MI Y G E+F E + V+ + M+ V+ + G
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 562 IDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+ KL + D Y+ + A+ +A ++ Q + L
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQIL 440
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 141/328 (42%), Gaps = 10/328 (3%)
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVS 284
+ D+ YS ++ K + LF E ++ R +Y L + +
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD----ASVYNALITAHLHTRDKA 185
Query: 285 EALEYFR--VMTKKGIFESS----VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV 338
+ALE R + KGI Y+ L+ +FA KV +V L ++ D
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 339 YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLI 398
+ ++ Y + ++++ V+ M+ + K +++ + K++ F + ++ L+
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 399 SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLR 458
+P T+ S+I Y + +KAE VF++M + + Y MI+MYG G +
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 459 NAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
A ++ ++ E N++++++ R + +KL++ +V PD +Y +
Sbjct: 366 RAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 425
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDR 546
AY+KA E L + +G V ++
Sbjct: 426 KAYTKADMKEQVQILMKKMEKDGIVPNK 453
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 193/480 (40%), Gaps = 25/480 (5%)
Query: 126 TLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQ--RKFKIAETLLN 183
+ H + L K + + F Y V D KLI C A LL
Sbjct: 4 AIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLL 63
Query: 184 AFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVF-EKLKSNSVVLDSRGYSHIMEAYSKLD 242
F E F F + +R Y++ +V VF E ++ V DS ++ +++A
Sbjct: 64 CFP---EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFR 120
Query: 243 DCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS 302
+ ++ + L +S ++G L G CG V A + F M + +
Sbjct: 121 SLRTGFQMHCQALKHGL-ESHLFVGT---TLIGMYGGCGCVEFARKVFDEMHQPNLV--- 173
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
++ +I + + V E+ + +++ + ++ Y++ LE + M
Sbjct: 174 AWNAVITACFRGNDVAGAREIF----DKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEM 229
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
D D ++ G + F+ + + +L G P +V+ V++A + +
Sbjct: 230 PHRD----DVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSF 285
Query: 423 NKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL 482
+ + +E+ G+ V +++I MY R G + A + M+E+ C + +
Sbjct: 286 EFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAG 345
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEY-RING 541
+ MHG+ + + +L+NEM V PD +S+ S++ A S AG E + F+E R+
Sbjct: 346 LAMHGQGE---EAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYH 402
Query: 542 GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
+ G MV ++ + G++ + + M + T + R A ++ L Q K
Sbjct: 403 IEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVK 462
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 137/342 (40%), Gaps = 13/342 (3%)
Query: 272 VLCESLGKCGRVSEALEYFRVMTKKG--IFESSVYSTLICSFASLHKVGEVEELLREAKS 329
+L E LGK + + LE FR M K+ I ++ VYS LI + L E K+
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV-----VNGFSKR 384
D VY L+ ++ K LE V D + C V + F++
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 385 RGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAY 444
++ L P T+ V++AY + + E V M ++ +
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 445 SSMIVMYGRSG---RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
+ +I YG+ ++ K + + KE KP + +NS+I +G+ + + + E ++ +
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKE---KPTLPTFNSMIINYGKARMIDKAEWVFKK 338
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
M P ++Y MI Y G E+F E + V+ + M+ V+ + G
Sbjct: 339 MNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGL 398
Query: 562 IDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWL 603
+ KL + D Y+ + A+ +A ++ Q + L
Sbjct: 399 YIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQIL 440
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 141/328 (42%), Gaps = 10/328 (3%)
Query: 225 VLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVS 284
+ D+ YS ++ K + LF E ++ R +Y L + +
Sbjct: 130 IPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPD----ASVYNALITAHLHTRDKA 185
Query: 285 EALEYFR--VMTKKGIFESS----VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV 338
+ALE R + KGI Y+ L+ +FA KV +V L ++ D
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 339 YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLI 398
+ ++ Y + ++++ V+ M+ + K +++ + K++ F + ++ L+
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLM 305
Query: 399 SQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLR 458
+P T+ S+I Y + +KAE VF++M + + Y MI+MYG G +
Sbjct: 306 RSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVS 365
Query: 459 NAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
A ++ ++ E N++++++ R + +KL++ +V PD +Y +
Sbjct: 366 RAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLY 425
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDR 546
AY+KA E L + +G V ++
Sbjct: 426 KAYTKADMKEQVQILMKKMEKDGIVPNK 453
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/464 (19%), Positives = 197/464 (42%), Gaps = 66/464 (14%)
Query: 129 HVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLLNAFKSD 188
+ I +L R K + ++ I+ + +K+++FC + A L N
Sbjct: 12 YFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQV--- 68
Query: 189 SEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSR-GYSHIMEAYSKLDDCESV 247
S VF + S +R Y ++ + ++++L S L R + + ++ + L C
Sbjct: 69 SNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSC--- 125
Query: 248 VKLFHEFESRNLRDSKRYLG-QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYST 306
YLG Q++G LC K G F V+T+ +
Sbjct: 126 -----------------YLGKQVHGHLC----KFG------PRFHVVTE---------NA 149
Query: 307 LICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDAD 366
LI + + + ++ E R I + L+ Y ++K + M D
Sbjct: 150 LIDMYMKFDDLVDAHKVFDEMYERDVIS----WNSLLSGYARLGQMKKAKGLFHLMLDKT 205
Query: 367 VKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAE 426
+ A+++G++ + A+ + ++ G EP +++ SV+ + +L +
Sbjct: 206 I----VSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGK 261
Query: 427 KVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMH 486
+ E++GF K +++I MY + G + A++L +M+ + +V ++++I +
Sbjct: 262 WIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK----DVISWSTMISGY 317
Query: 487 GREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN----EYRINGG 542
N + +NEM+R KV P+ +++ ++ A S G ++ F+ +Y+I
Sbjct: 318 AYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK 377
Query: 543 VIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
+ G ++ V ++ G++++ V++ + M M + D +++ S
Sbjct: 378 I---EHYGCLIDVLARAGKLERAVEITKTMPM---KPDSKIWGS 415
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 167/386 (43%), Gaps = 32/386 (8%)
Query: 158 DGATCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRN-YNKLHMFRRTVLVF 216
D AT S+LI+ CI R + + + + L N Y K ++ +F
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCES 276
+++ +V+ ++ ++ AYSK + ++L LRD+ R Y + S
Sbjct: 120 DQMPQRNVI----SWTTMISAYSKCKIHQKALELLVLM----LRDNVRPNVYTYSSVLRS 171
Query: 277 LGKCGRVSEALEYFRVMTKKGIFESSVY--STLICSFASLHKVGEVEELLREAKSRTKIK 334
C +S+ + K+G+ ES V+ S LI FA K+GE E+ L
Sbjct: 172 ---CNGMSDVRMLHCGIIKEGL-ESDVFVRSALIDVFA---KLGEPEDAL-SVFDEMVTG 223
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAY 394
D V+ ++ + + + LE+ + MK A L +V+ + ++A+
Sbjct: 224 DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 395 EKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
++ Y+ + ++++ YC+ A +VF +M+++ V+ +S+MI ++
Sbjct: 284 VHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERD----VITWSTMISGLAQN 337
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK----VAPD 510
G + A+KL +MK G KPN Y +++ + + LE W + K + P
Sbjct: 338 GYSQEALKLFERMKSSGTKPN---YITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPV 394
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNE 536
+ Y MI KAG+ + +L NE
Sbjct: 395 REHYGCMIDLLGKAGKLDDAVKLLNE 420
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%), Gaps = 11/198 (5%)
Query: 375 CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQ 434
C++++ ++K +A R ++++ + + ++I+ Y +L AEK+F EM +
Sbjct: 218 CSIIDAYAKCGQMESAKRCFDEMTVKDIH----IWTTLISGYAKLGDMEAAEKLFCEMPE 273
Query: 435 KGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQ 494
K V+++++I Y R G A+ L KM G KP + ++S + +LR
Sbjct: 274 KN----PVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRH 329
Query: 495 LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVG 554
+++ M R V P+ + +S+I YSK+G E +F RI D M+
Sbjct: 330 GKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF---RICDDKHDCVFWNTMIS 386
Query: 555 VFSKVGQIDQLVKLLQDM 572
++ G + +++L DM
Sbjct: 387 ALAQHGLGHKALRMLDDM 404
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 163/381 (42%), Gaps = 40/381 (10%)
Query: 165 LIEFCIRQRKFKI-----AETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKL 219
L+ C++ R+ ++ + L+ F S+ V S + Y K F+++
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSN----VVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 220 KSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGK 279
V D ++ ++ Y+KL D E+ KLF E +N + I G + + G
Sbjct: 241 ----TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKN---PVSWTALIAGYVRQGSG- 292
Query: 280 CGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV 338
+ AL+ FR M G+ E +S+ +C+ AS+ + +E + RT ++ +
Sbjct: 293 ----NRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKE-IHGYMIRTNVRPNAI 347
Query: 339 YL-KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC-AVVNGFSKRRGFSAAVRAYEK 396
+ L+ MY + LE + V D DC+ +++ ++ A+R +
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKH----DCVFWNTMISALAQHGLGHKALRMLDD 403
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME-QKGFDKCVVAYSSMIVMYGRSG 455
+I +P + T ++NA + + FE M Q G Y+ +I + GR+G
Sbjct: 404 MIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLID---MHGREKNLRQLEKLWNEMKRRKVAPDKV 512
+ M+ K++E +P+ ++N+++ +HG E+ ++ ++ AP
Sbjct: 464 CFKELMR---KIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAP--- 517
Query: 513 SYTSMIGAYSKAGEFETCTEL 533
Y + Y+ G++E +L
Sbjct: 518 -YILLSSIYADHGKWELVEKL 537
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 154/354 (43%), Gaps = 9/354 (2%)
Query: 227 DSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEA 286
DSR Y+ +M +K E++V + E ++ L + + + ++ +A
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-----LTMETFTIAMKAFAAAKERKKA 247
Query: 287 LEYFRVMTKKGIFESSVYSTLICSFASL--HKVGEVEELLREAKSRTKIKDPEVYLKLVI 344
+ F +M KK F+ V T+ C SL K+G+ ++L + + Y L+
Sbjct: 248 VGIFELM-KKYKFKIGV-ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 305
Query: 345 MYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEP 404
+ L + + M D +K ++ G + S A++ + + S+G P
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 405 GQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLV 464
+Y +I +C+ S A + F++M G Y+ +I +G +L +L+
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELL 425
Query: 465 AKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKA 524
+M+E+G P+ YN+LI + +K +++N+M + ++ P ++ ++ +Y A
Sbjct: 426 KEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVA 485
Query: 525 GEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
+E +++E G D +++ G+ + + L++M +G +
Sbjct: 486 RNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 539
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 42/270 (15%)
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+K R F V E++ ++G + T+ + A+ + KA +FE M++ F
Sbjct: 204 LAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG 262
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
V + ++ GR+ + A L K+KER PN+ Y L++ R +NL + ++WN
Sbjct: 263 VETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWN 321
Query: 501 EMKRRKVAPDKV-----------------------------------SYTSMIGAYSKAG 525
+M + PD V SYT MI + K
Sbjct: 322 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 381
Query: 526 EFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
ET E F++ +G D A+ ++ F ++D + +LL++M+ +G D + Y
Sbjct: 382 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 441
Query: 586 S-----AWNAFIEAGLQLQAKWLQESFHVS 610
+ A E G ++ K +Q S
Sbjct: 442 ALIKLMANQKMPEHGTRIYNKMIQNEIEPS 471
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 122/297 (41%), Gaps = 5/297 (1%)
Query: 161 TCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLK 220
T + L++ R + K A+ L + K + + L + ++ ++ +
Sbjct: 265 TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 324
Query: 221 SNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKC 280
+ + D ++ ++E + +KLFH +S+ + R Y ++ K
Sbjct: 325 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS----YTIMIRDFCKQ 380
Query: 281 GRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
+ A+EYF M G+ +++VY+ LI F + K+ V ELL+E + + D + Y
Sbjct: 381 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 440
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
L+ + + + E + M +++ ++ + R + ++++I
Sbjct: 441 NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 500
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
+G P +Y +I + +A + EEM KG ++ Y+ + R G+
Sbjct: 501 KGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 139/363 (38%), Gaps = 88/363 (24%)
Query: 315 HKVGEVEELLREAKSRTKIKD----------PEVYLKLVIMYVEEDLLEKTLEVVEAMKD 364
H VG VE+L RE S +I + P V+L L+ ++ + +K +EV M
Sbjct: 77 HMVGVVEKLTREYYSIDRIIERLKISGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSS 136
Query: 365 ----ADVKVCDCML-----CAVVNG----------------------FSKR--RGFSAAV 391
+ + + M+ VVNG F R RG V
Sbjct: 137 FGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGV 196
Query: 392 R-AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVM 450
+ +++I +G+ P + + ++ CR ++A +V M G V +S ++
Sbjct: 197 KIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSG 256
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID-------------------------- 484
+ RSG + A+ L KM + GC PN+ Y SLI
Sbjct: 257 FFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPD 316
Query: 485 ---------MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
+ R + K++ +++RK+ PD+ ++ S++ + +G+F+
Sbjct: 317 IVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVP---- 372
Query: 536 EYRINGGV---IDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
RI G+ D ++ FSK+G +K+L M + LD Y +A
Sbjct: 373 --RITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALC 430
Query: 593 EAG 595
G
Sbjct: 431 RGG 433
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/439 (17%), Positives = 177/439 (40%), Gaps = 50/439 (11%)
Query: 187 SDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCES 246
S E+ F L + + H++ + + V+ + S V ++R + +M+ KL+
Sbjct: 102 SGCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNG 161
Query: 247 VVKLFHEFESRNL----------------------------------RDSKRYLGQIYGV 272
+++F RN ++ GQI +
Sbjct: 162 ALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRL 221
Query: 273 LCESLGKCGRVSEALEYFRVMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRT 331
C + G VSEA + +M GI S +V+S L+ F + + +L +
Sbjct: 222 CCRT----GCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIG 277
Query: 332 KIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD----ADVKVCDCMLCAVVNGFSKRRGF 387
+ Y L+ +V+ ++++ V+ ++ D+ +C+ M ++ +++ F
Sbjct: 278 CSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLM----IHTYTRLGRF 333
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
A + + L + P Q T+AS++++ C +++ ++ + G D +V + +
Sbjct: 334 EEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLL 390
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
+ + G A+K+++ M + + + Y + R R K++ + + K
Sbjct: 391 SNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKK 450
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
D ++++I + + G++ T LF + +D + + + +I++
Sbjct: 451 HLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYS 510
Query: 568 LLQDMKMEGTRLDQRLYQS 586
L DMK G ++R Y++
Sbjct: 511 LCCDMKEGGIYPNRRTYRT 529
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 356 LEVVEAMKDADVKVCDCM-----LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYA 410
L+V+ M D + DC L A+ G + R AA++ Y+ +I + ++
Sbjct: 404 LKVLSIMSYKDFAL-DCYTYTVYLSALCRGGAPR----AAIKMYKIIIKEKKHLDAHFHS 458
Query: 411 SVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER 470
++I++ L +YN A +F+ + + VV+Y+ I R+ R+ A L MKE
Sbjct: 459 AIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEG 518
Query: 471 GCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD---KVSYTSMIGAYSKAGEF 527
G PN Y ++I +EK ++ K+ E + V D K S++ Y G+F
Sbjct: 519 GIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYR--GDF 576
Query: 528 ETCTELFNEYR 538
+F +++
Sbjct: 577 SEFRSVFEKWK 587
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 110/497 (22%), Positives = 196/497 (39%), Gaps = 101/497 (20%)
Query: 173 RKF---KIAETL--LNAFKSDSEVAVFAFGSALRNYNKLHMFR--RTVLVFEKLKSNSVV 225
RKF K++ +L L + + VF G L Y + R + ++ E L+ NS
Sbjct: 17 RKFQSRKVSSSLPKLELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNS-- 74
Query: 226 LDSRGYSHIMEAYSKLDDCESVVKLFHEFESRN-------LRD--SKRYLGQ---IYGVL 273
S G +M AY+ L D S K+F E RN +R + + G+ ++G +
Sbjct: 75 --SLGVK-LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTM 131
Query: 274 CES------------LGKC---GRVSEALEYFRVMTKKGIFESS-VYSTLICSFASLHKV 317
C L C G + + TK G+ + V + L+ + +
Sbjct: 132 CGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 318 GEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA----DVKVCDCM 373
E +L E R D + LV+ Y + + LEV M+ D +
Sbjct: 192 SEARLVLDEMSRR----DVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASL 247
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
L AV N ++ V + + + + V++ +I Y + + +A +++ ME
Sbjct: 248 LPAVSNTTTEN------VMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRME 301
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLR 493
GF+ V+ +S++ G + L K+ ++ + PN+ + N+LIDM+ + L
Sbjct: 302 ADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLE 361
Query: 494 QLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDR------- 546
+ ++ MK R D VS+T+MI AY +G LF++ + +G V D
Sbjct: 362 KARDVFENMKSR----DVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 547 ---AMAGI--------------------------MVGVFSKVGQIDQLVKLLQDMKMEGT 577
+ AG+ MV + + G++ + + +QDM ME
Sbjct: 418 AACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPN 477
Query: 578 RLDQRLYQSAWNAFIEA 594
+ W A + A
Sbjct: 478 -------ERVWGALLGA 487
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/330 (17%), Positives = 150/330 (45%), Gaps = 7/330 (2%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
V ++ + + D + Y+ ++ + +K +++ ++FH+ + + + +G L
Sbjct: 489 VLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANL----HTFGALI 544
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
+ + G+V++A + ++ K + + V++ LI + V ++L E K+ T
Sbjct: 545 DGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHP 604
Query: 334 KDPEVYLKLVIMYV--EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAV 391
DP+ +M +E+ EV + + ++ + VN SK + A
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFAC 664
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
Y+ + + P +V ++++I+ ++A + ++ + +G ++YSS++
Sbjct: 665 SIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGAC 724
Query: 452 GRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDK 511
+ + A++L K+K +P + N+LI L + + +E+K + P+
Sbjct: 725 CNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 512 VSYTSMIGAYSKAGEFETCTELFNEYRING 541
++Y+ ++ A + +FE +L ++ + +G
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDG 814
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 93/215 (43%), Gaps = 6/215 (2%)
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
K+R A R + KLI P T+ +++ A V +++ G
Sbjct: 448 KQRAVKEAFR-FTKLI---LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCK 503
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
Y+++I +SG++ ++ +M G + N+ + +LID R + + + +
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGIL 563
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVI--DRAMAGIMVGVFSKVG 560
+ + V PD+V + ++I A ++G + ++ E + I D G ++ G
Sbjct: 564 RSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 561 QIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
Q+++ ++ Q + G R +Y A N+ ++G
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSG 658
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/225 (19%), Positives = 94/225 (41%), Gaps = 3/225 (1%)
Query: 369 VCDCML-CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEK 427
DC L +++ +K A + ++ + G E T+ ++I+ R Q KA
Sbjct: 499 TADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFG 558
Query: 428 VFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK--ERGCKPNVWVYNSLIDM 485
+ + K V ++++I G+SG + A ++A+MK P+ +L+
Sbjct: 559 AYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKA 618
Query: 486 HGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVID 545
+ + ++++ + + + YT + + SK+G+++ ++ + + D
Sbjct: 619 CCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPD 678
Query: 546 RAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNA 590
++ V +D+ +LQD K +G RL Y S A
Sbjct: 679 EVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGA 723
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+++G K F A + L+ G +P TY N R S +AEK++ EM ++G
Sbjct: 20 IIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTY----NMMIRFSSLGRAEKLYAEMIRRG 75
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ Y+SMI + +L A K+ + C +N+LI+ + + ++
Sbjct: 76 LVPDTITYNSMIHGLCKQNKLAQARKV-----SKSCS----TFNTLINGYCKATRVKDGM 126
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING 541
L+ EM RR + + ++YT++I + + G+F T ++F E NG
Sbjct: 127 NLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 13/168 (7%)
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
Y +I+ C+ ++++A +F + G V Y+ MI R L A KL A+M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
RG P+ YNS+I ++ L Q RKV+ ++ ++I Y KA +
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQ---------ARKVSKSCSTFNTLINGYCKATRVK 123
Query: 529 TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
LF E G V + ++ F +VG + + + Q+M G
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 182/452 (40%), Gaps = 51/452 (11%)
Query: 56 LEEASNSNTPMLDVDNVNNIAGSHQQYSNPGTENLNEFLCGLFQDPKTEELAFDYYQRLK 115
L E+S N+P D D V+++ +++ S+ T + + L + + EL FD ++RL
Sbjct: 135 LIESSLLNSPP-DSDLVDSLLDTYEISSS--TPLVFDLLVQCYAKIRYLELGFDVFKRLC 191
Query: 116 DRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSE---DFKIYHVLPDGATCSKLIEFCIRQ 172
D F TL +I Y + K D + + E D +IY P+ T +I+ ++
Sbjct: 192 DCG-FTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIY---PNEITIRIMIQVLCKE 247
Query: 173 RKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFR--RTVLVFEKLKSNSVVLDSRG 230
+ K LL+ + ++L + L R ++ + ++L ++V+D+ G
Sbjct: 248 GRLKEVVDLLDRICGKRCLPSVIVNTSLV-FRVLEEMRIEESMSLLKRLLMKNMVVDTIG 306
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
YS ++ A +K D S K+F E R + V CE G V EA
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEK----GDVKEAERLL 362
Query: 291 RVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEED 350
M + G+ S T C + G
Sbjct: 363 SEMEESGV--SPYDETFNCLIGGFARFG-------------------------------- 388
Query: 351 LLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYA 410
EK LE E M + +V SK + A K I +G+ P + TY+
Sbjct: 389 WEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYS 448
Query: 411 SVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER 470
+I + + ++A K+F EME + + S+IV G++ K + MK+R
Sbjct: 449 HLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKR 508
Query: 471 GCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
+PN +Y++LI + + ++++NEM
Sbjct: 509 LIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/288 (19%), Positives = 128/288 (44%), Gaps = 6/288 (2%)
Query: 316 KVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
++ EV +LL + + V LV +EE +E+++ +++ + ++ V
Sbjct: 249 RLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYS 308
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
VV +K +A + +++++ +G+ Y + C +AE++ EME+
Sbjct: 309 IVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEES 368
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G ++ +I + R G ++ M RG P+ +N ++ + +N+ +
Sbjct: 369 GVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRA 428
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF--NEYR-INGGVIDRAMAGIM 552
++ + + PD+ +Y+ +I + + + + +LF EYR ++ G ++
Sbjct: 429 NEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGF--EVFRSLI 486
Query: 553 VGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQA 600
VG+ + G+++ K L+ MK + +Y + AF + G + A
Sbjct: 487 VGLCT-CGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNA 533
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/256 (20%), Positives = 113/256 (44%), Gaps = 1/256 (0%)
Query: 282 RVSEALEYF-RVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
R+ E++ R++ K + ++ YS ++ + A + ++ E R + VY
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
V + E+ +++ ++ M+++ V D ++ GF++ + E ++++
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
G P + ++ + ++ N+A ++ + KGF YS +I + + A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+KL +M+ R P V+ SLI + EK MK+R + P+ Y ++I A
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Query: 521 YSKAGEFETCTELFNE 536
+ K G+ ++NE
Sbjct: 524 FQKIGDKTNADRVYNE 539
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 134/283 (47%), Gaps = 7/283 (2%)
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAK 328
Y L E + G +S A + + + +K I SV+ L+ + L+ + + RE
Sbjct: 73 YTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVL 132
Query: 329 SRTKIKDP---EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRR 385
K+P + YL L ++ D +++ + ++ + ++ ++ F++ R
Sbjct: 133 ILPG-KEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETR 191
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAY 444
+ +++ +P +TY SV++ R N+ V M++ ++ Y
Sbjct: 192 QIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITY 251
Query: 445 SSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
++++ ++ R + + +M + G +P++ Y ++ID GR N+++ +L++EMK+
Sbjct: 252 NTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQ 311
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRA 547
R++ P Y ++I K+G+F++ +L +E + N +D A
Sbjct: 312 RQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK-NTSSLDLA 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/289 (19%), Positives = 132/289 (45%), Gaps = 10/289 (3%)
Query: 220 KSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGK 279
+S S ++ Y++++E +++ + L + +N+ ++ L + G+
Sbjct: 62 ESGSKIISKIDYTNLVEKFTRDGNLSGAYDLLQSLQEKNICLPI----SVFKNLLAAAGE 117
Query: 280 CGRVSEALEYFR---VMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDP 336
+ + FR ++ K S Y L +F + + LL+E +
Sbjct: 118 LNDMKLSCRVFREVLILPGKEPLSSDCYLNLARAFINTDDCTYLTSLLKEISESSLPYRL 177
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEK 396
V +++ + E ++K L +++ MK+ + K D + V R G +
Sbjct: 178 IVMNRIIFAFAETRQIDKVLMILKEMKEWECKP-DVITYNSVLDILGRAGLVNEILGVLS 236
Query: 397 LISQ--GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRS 454
+ + +TY +V+N + +++ ++ EM Q G + +++Y+++I GRS
Sbjct: 237 TMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRS 296
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMK 503
G ++ +++L +MK+R +P+V+VY +LID + + + +L +E+K
Sbjct: 297 GNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 131/291 (45%), Gaps = 7/291 (2%)
Query: 199 ALRNYNKLHMFRRTVLVFEKLKSNS-VVLDSRGYSHIMEAYSKLDDCESVVKLF-HEFES 256
+LRN K +F + + S + LD + ++ ++++Y + VKLF H +S
Sbjct: 55 SLRNPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKS 114
Query: 257 R-NLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTL-ICSFASL 314
+ N R + + C + +S +M G+ V + + + S
Sbjct: 115 QPNFRPGRSTFLILLSHACRAPD--SSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCET 172
Query: 315 HKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA-DVKVCDCM 373
+V E ++L++E + D Y L+ + L E V+ M+D DVK
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
+++ + A+ KL + G++P Y +++ +C LS+ ++A V+++M+
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 434 QKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLID 484
++G + + Y+++I ++GR+ A + M + G +P+ Y SL++
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 86/205 (41%), Gaps = 1/205 (0%)
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
R +++ G EP QVT + + C + ++A+ + +E+ +K Y+ ++
Sbjct: 145 RVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHL 204
Query: 452 GRSGRLRNAMKLVAKMKER-GCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
+ L + V +M++ KP++ + LID KNLR+ L +++ PD
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPD 264
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
Y +++ + + ++ + + G D+ ++ SK G++++ L+
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 571 DMKMEGTRLDQRLYQSAWNAFIEAG 595
M G D Y S N G
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 3/204 (1%)
Query: 402 YEPGQVTYASVINAYCRL--SQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+ PG+ T+ +++ CR S + +V M G + V + +GR+
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR-KVAPDKVSYTSMI 518
A L+ ++ E+ P+ + YN L+ + K+L + + +EM+ V PD VS+T +I
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
+ L ++ G D + ++ F + + + V + + MK EG
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 579 LDQRLYQSAWNAFIEAGLQLQAKW 602
DQ Y + +AG +A+
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARM 321
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 124/287 (43%), Gaps = 14/287 (4%)
Query: 178 AETLLNAFKSDSEVAV-FAF-GSALRNYNKLHMFRRTVLVFEK-LKSNSVVLDSRGYSHI 234
A++L N+ + S + + F S L++Y + + TV +F+ LKS R I
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 235 MEAYSKLDDC---ESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFR 291
+ +++ C +S + H + + + + SL + GRV EA + +
Sbjct: 128 LLSHA----CRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 292 VMTKK-GIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYV-EE 349
+T+K ++ Y+ L+ + V E + E + +K V ++I V
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 350 DLLEKTLEVVEAMKDADVKVCDCML-CAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
L + + +V + +A K DC L ++ GF S AV Y+K+ +G EP Q+T
Sbjct: 244 KNLREAMYLVSKLGNAGFKP-DCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQIT 302
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSG 455
Y ++I + + +A + M G++ Y+S++ R G
Sbjct: 303 YNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVIN 414
L++VE M +A + + +L +++ + F+ R Y + ++ +P T+ IN
Sbjct: 412 ALDIVENMCEAGLVISANILHSLLQAIEQILEFNLVQRIYSIMSNKSVKPNSETFRKSIN 471
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKP 474
R+ + A + ++ Y+S++ Y R ++ +A+K++ +MKE KP
Sbjct: 472 LCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSALKVLKEMKEADVKP 531
Query: 475 NVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
+ ++ LI+ G E + K + EMK+ V +K Y S++ AY+ G+FE ++
Sbjct: 532 DSVTFSYLINYCGEEATIA---KYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVL 588
Query: 535 NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMK 573
+ + + + +++ + G I + + + ++MK
Sbjct: 589 MDLEVPAKDHNE-LKSVLISALASNGNITEALSIYEEMK 626
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 403 EPGQVTYA----SVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLR 458
E G V A S++ A ++ ++N ++++ M K + I + R
Sbjct: 421 EAGLVISANILHSLLQAIEQILEFNLVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFE 480
Query: 459 NAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI 518
A ++ +K PN +YNS++ + REK + K+ EMK V PD V+++ +I
Sbjct: 481 GAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLI 540
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKM 574
+ GE T + + E + G +++ + +V ++ GQ ++ ++L D+++
Sbjct: 541 ---NYCGEEATIAKYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVLMDLEV 593
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 188/452 (41%), Gaps = 62/452 (13%)
Query: 169 CIRQRKFKIAETLLNAFKS------DSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSN 222
C +F+ A LL ++ DS + F+ G L R + L + ++ N
Sbjct: 46 CTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNR-------RLSFLAYRHMRRN 98
Query: 223 SVVLDSRGYSHIMEAYSKLDDCES------VVK------------LFHEFESRNLRD--S 262
V+ + +++A KL D +VK L + S L D S
Sbjct: 99 GVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFAS 158
Query: 263 KRYLGQ------IYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHK 316
+ + G + + + + G SEA+ YF M K G+ + + T++ + L
Sbjct: 159 RLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEM--TVV---SVLKA 213
Query: 317 VGEVEEL--------LREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK 368
G+VE++ L R K D + LV MY + + +V + M +V
Sbjct: 214 AGKVEDVRFGRSVHGLYLETGRVKC-DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNV- 271
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
A++ G+ + R F + +E+++ P + T +SV++A + ++ +V
Sbjct: 272 ---VTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 429 FEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGR 488
M + + A +++I +Y + G L A+ + ++ E+ NV+ + ++I+
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK----NVYTWTAMINGFAA 384
Query: 489 EKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRA- 547
R L+ M V+P++V++ +++ A + G E LF + + +A
Sbjct: 385 HGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKAD 444
Query: 548 MAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
MV +F + G +++ L++ M ME T +
Sbjct: 445 HYACMVDLFGRKGLLEEAKALIERMPMEPTNV 476
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 140/316 (44%), Gaps = 13/316 (4%)
Query: 281 GRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
G V ALE R+M +G+ ++V ++L+ KV + + L A + D +
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIE 357
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
L+ MY + ++ V K A++ G + S A+ ++++
Sbjct: 358 TSLISMYAKCKRVDLCFRVFSGAS----KYHTGPWSAIIAGCVQNELVSDALGLFKRMRR 413
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRN 459
+ EP T S++ AY L+ +A + + + GF + A + ++ +Y + G L +
Sbjct: 414 EDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLES 473
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIG 519
A K+ ++E+ +V ++ +LI +G + +++ EM R V P+++++TS +
Sbjct: 474 AHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALN 533
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRA-MAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
A S +G E LF + + R+ +V + + G++D+ L+ + E T
Sbjct: 534 ACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPT- 592
Query: 579 LDQRLYQSAWNAFIEA 594
+ W A + A
Sbjct: 593 ------STVWGALLAA 602
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 144/351 (41%), Gaps = 42/351 (11%)
Query: 281 GRVSEALEYFRVMTKKGIF--ESSVYSTL-ICSFASLHKVG-EVEELLREAKSRTKIKDP 336
G +++AL F M + + +++ S L +C ++G V +L+ E + KI
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKI--- 253
Query: 337 EVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEK 396
EV LV MY++ +++ V + M+ DV CM +NG+++ A+
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM----INGYTEDGDVENALELCRL 309
Query: 397 LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
+ +G P VT AS+++ + N + + ++ ++ +S+I MY + R
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKR 369
Query: 457 L-------------------------------RNAMKLVAKMKERGCKPNVWVYNSLIDM 485
+ +A+ L +M+ +PN+ NSL+
Sbjct: 370 VDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPA 429
Query: 486 HGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVID 545
+ +LRQ + + + + T ++ YSK G E+ ++FN + D
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 546 RAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
+ G ++ + G +++ +M G ++ + SA NA +GL
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGL 540
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 43/237 (18%)
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+D V L+ MY+ +E +V + MK+ DV + M ++G+ + + A+
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM----ISGYYRNGYMNDALMM 205
Query: 394 YEKLISQGYEPGQVTYAS-----------------------------------VINAYCR 418
++ ++++ + T S ++N Y +
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLK 265
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
+ ++A VF+ ME++ V+ ++ MI Y G + NA++L M+ G +PN
Sbjct: 266 CGRMDEARFVFDRMERRD----VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
SL+ + G + + L R++V D + TS+I Y+K + C +F+
Sbjct: 322 IASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/443 (18%), Positives = 184/443 (41%), Gaps = 38/443 (8%)
Query: 157 PDGATCSKLIEFCIRQRKFKIAETLL-NAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLV 215
PD T L + C R + +L + K E+ +++ + V
Sbjct: 154 PDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKV 213
Query: 216 FEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLR-DSKRYLGQIYGVLC 274
F++ S V D ++ ++ Y K+ + E + ++ ES ++ D +G + C
Sbjct: 214 FDE----SPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS--C 267
Query: 275 ESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKI 333
LG R E EY + + G+ + + L+ F+ + E + + RT +
Sbjct: 268 SMLGDLNRGKEFYEYVK---ENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIV 324
Query: 334 KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRA 393
+ ++ Y LL+ + ++ + M++ DV + + M+ V +RG A+
Sbjct: 325 S----WTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQA---KRG-QDALAL 376
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGR 453
++++ + +P ++T ++A +L + + +E+ V +S++ MY +
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAK 436
Query: 454 SGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVS 513
G + A+ + ++ R N Y ++I + +NEM +APD+++
Sbjct: 437 CGNISEALSVFHGIQTR----NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEIT 492
Query: 514 YTSMIGAYSKAGEFETCTELFNE----YRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
+ ++ A G +T + F++ + +N + + IMV + + G +++ +L+
Sbjct: 493 FIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYS---IMVDLLGRAGLLEEADRLM 549
Query: 570 QDMKMEGTRLDQRLYQSAWNAFI 592
+ M ME + W A +
Sbjct: 550 ESMPMEAD-------AAVWGALL 565
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 112/241 (46%), Gaps = 16/241 (6%)
Query: 309 CSFASLHKVGEVEELLREAKSRTKIKDPEV--YLKLVIMYVEEDLLEKTLEVVEAMKDA- 365
C ++H+ + + +K R P+V Y ++ ++ L K +E+ AM D
Sbjct: 258 CVLGNVHEAKRFWKDIIASKCR-----PDVVSYGTMINALTKKGKLGKAMELYRAMWDTR 312
Query: 366 ---DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
DVK+C+ ++ A+ F KR A+ + ++ +G +P VTY S++ C++ +
Sbjct: 313 RNPDVKICNNVIDALC--FKKR--IPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRT 368
Query: 423 NKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL 482
K ++ EEME KG C + + S R ++ ++ +M + C+ +YN +
Sbjct: 369 EKVWELVEEMELKG-GSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLM 427
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG 542
++ + ++ ++W+EM+R + PD+ +YT I G+ F E G
Sbjct: 428 FRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGM 487
Query: 543 V 543
V
Sbjct: 488 V 488
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 37/275 (13%)
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKK-GIFESSVYSTLICSFASLHKVGEVEELLREA 327
+Y + + LGK R E + F M+K+ G Y L+ +A+ HKV E + E
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF-ER 203
Query: 328 KSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
+ I D V ++M++ + V+ + + C S+RR F
Sbjct: 204 RKEFGIDDDLVAFHGLLMWL--------------CRYKHVEFAETLFC------SRRREF 243
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
++A ++N +C L ++A++ ++++ VV+Y +M
Sbjct: 244 GCDIKAMN---------------MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTM 288
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I + G+L AM+L M + P+V + N++ID +K + + +++ E+ +
Sbjct: 289 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGP 348
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG 542
P+ V+Y S++ K E EL E + GG
Sbjct: 349 DPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG 383
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 151/352 (42%), Gaps = 36/352 (10%)
Query: 238 YSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF-RVMTKK 296
Y K D E K+ E +N+ + + + G SEAL F +M
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVS--------WTAMISRYSQTGHSSEALTVFAEMMRSD 148
Query: 297 GIFESSVYSTLICSFASLHKVG---EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLE 353
G ++T++ S +G ++ L+ + + I V L+ MY + ++
Sbjct: 149 GKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIF---VGSSLLDMYAKAGQIK 205
Query: 354 KTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVI 413
+ E+ E + + DV C A++ G+++ A+ + +L S+G P VTYAS++
Sbjct: 206 EAREIFECLPERDVVSC----TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLL 261
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
A L+ + ++ + ++ V +S+I MY + G L A +L M ER
Sbjct: 262 TALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER--- 318
Query: 474 PNVWVYNSLI---DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETC 530
+N+++ HG + + +L +L + KR V PD V+ +++ S +T
Sbjct: 319 -TAISWNAMLVGYSKHGLGREVLELFRLMRDEKR--VKPDAVTLLAVLSGCSHGRMEDTG 375
Query: 531 TELFN-----EYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
+F+ EY G G +V + + G+ID+ + ++ M + T
Sbjct: 376 LNIFDGMVAGEYGTKPGT---EHYGCIVDMLGRAGRIDEAFEFIKRMPSKPT 424
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 22/240 (9%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
A++N +R R + +I Y P ++ Y + A KV +EM +K
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL--- 492
VV++++MI Y ++G A+ + A+M KPN + + +++ R L
Sbjct: 117 N----VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 493 RQLEKL---WNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA 549
+Q+ L WN V +S++ Y+KAG+ + E+F E V+ +
Sbjct: 173 KQIHGLIVKWNYDSHIFVG------SSLLDMYAKAGQIKEAREIF-ECLPERDVV--SCT 223
Query: 550 GIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKWLQESFHV 609
I+ G ++++G ++ +++ + EG + Y S A +GL L Q HV
Sbjct: 224 AIIAG-YAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTAL--SGLALLDHGKQAHCHV 280
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 134/307 (43%), Gaps = 22/307 (7%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
++ +++ Y +L DC++ LF + R++ + + G +A+E F
Sbjct: 211 WNVMIDGYMRLGDCKAARMLFDKMRQRSVVS--------WNTMISGYSLNGFFKDAVEVF 262
Query: 291 RVMTKKGIFESSVYSTLICSFASLHKVGEVE--ELLREAKSRTKIK-DPEVYLKLVIMYV 347
R M K I + Y TL+ ++ ++G +E E L + I+ D + L+ MY
Sbjct: 263 REMKKGDIRPN--YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 320
Query: 348 EEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQV 407
+ ++EK + V E + +V A++NGF+ A+ + K+ G P V
Sbjct: 321 KCGIIEKAIHVFERLPRENV----ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 376
Query: 408 TYASVINAYCRLSQYNKAEKVFEEM-EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
Y +++ A + + F +M G + + Y M+ + GRSG L A + +
Sbjct: 377 AYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILN 436
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
M KP+ ++ +L+ + N+ +++ N + V D +Y ++ Y+ G
Sbjct: 437 MP---IKPDDVIWKALLGACRMQGNVEMGKRVANILM-DMVPHDSGAYVALSNMYASQGN 492
Query: 527 FETCTEL 533
+ +E+
Sbjct: 493 WSEVSEM 499
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 376 AVVNGFSKR---RGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
++ GFS+ + A YE + + EP + T+ SV+ A + + + +++
Sbjct: 95 TIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLA 154
Query: 433 EQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL----------VAKMKERGCKPNVWVYNSL 482
+ GF S+++ MY G +++A L V R + ++N +
Sbjct: 155 LKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVM 214
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYR 538
ID + R + + L+++M++R V VS+ +MI YS G F+ E+F E +
Sbjct: 215 IDGYMRLGDCKAARMLFDKMRQRSV----VSWNTMISGYSLNGFFKDAVEVFREMK 266
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 81/190 (42%), Gaps = 8/190 (4%)
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
V + +I+ Y RL A +F++M Q+ VV++++MI Y +G ++A+++ +
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRS----VVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 467 MKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGE 526
MK+ +PN S++ R +L E L + + D V +++I YSK G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 527 FETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQS 586
E +F + A M+ F+ GQ + M+ G R Y +
Sbjct: 325 IEKAIHVFERLPRENVITWSA----MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYIN 380
Query: 587 AWNAFIEAGL 596
A GL
Sbjct: 381 LLTACSHGGL 390
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 141/319 (44%), Gaps = 36/319 (11%)
Query: 229 RGYSHIMEA-------YSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCG 281
RGY ++E YSK E+V +FH+ RN+ +
Sbjct: 305 RGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS------------- 351
Query: 282 RVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL 340
+A+ F M G++ + V + LI + ++ E ++ + +P V
Sbjct: 352 NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGN 411
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
+ +Y + + LE + E + ++ + M ++GF++ GFS A + +S
Sbjct: 412 SFITLYAKFEALEDAKKAFEDITFREIISWNAM----ISGFAQN-GFSH--EALKMFLSA 464
Query: 401 GYE--PGQVTYASVINA--YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
E P + T+ SV+NA + + ++ + + G + C V S+++ MY + G
Sbjct: 465 AAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGN 524
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
+ + K+ +M ++ N +V+ S+I + + + L+++M + VAPD V++ S
Sbjct: 525 IDESEKVFNEMSQK----NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLS 580
Query: 517 MIGAYSKAGEFETCTELFN 535
++ A ++ G + E+FN
Sbjct: 581 VLTACNRKGMVDKGYEIFN 599
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 17/203 (8%)
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYE 395
P V L+ MY + ++++ +V M + V ++++ +S F + +
Sbjct: 509 PVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFV----WTSIISAYSSHGDFETVMNLFH 564
Query: 396 KLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM-EQKGFDKCVVAYSSMIVMYGRS 454
K+I + P VT+ SV+ A R +K ++F M E + YS M+ M GR+
Sbjct: 565 KMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRA 624
Query: 455 GRLRNAMKLVAKMKERGCKPNVWVYNSLID---MHGREKNLRQLEKLWNEMKRRKVAPD- 510
GRL+ A +L M E P + S++ +HG K ++ +L EMK P+
Sbjct: 625 GRLKEAEEL---MSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMK-----PEL 676
Query: 511 KVSYTSMIGAYSKAGEFETCTEL 533
SY M Y++ E++ E+
Sbjct: 677 SGSYVQMYNIYAEKEEWDKAAEI 699
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 166/377 (44%), Gaps = 26/377 (6%)
Query: 163 SKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALR---NYNKLHMFRRTVLVFEKL 219
S L F I + LL ++SD + AL+ NY L R + V +
Sbjct: 312 SMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNL---RLGLQVHSLV 368
Query: 220 KSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGK 279
+ LD S +++ ++ + + + KLFH ++ D + G I G + K
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNK---DIIAFSGLIRGCV-----K 420
Query: 280 CGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEV 338
G S A FR + K G+ + + S ++ +SL +G +++ + +P
Sbjct: 421 SGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT 480
Query: 339 YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLI 398
LV MYV+ ++ + + + M + DV ++ GF + A R + K+I
Sbjct: 481 ATALVDMYVKCGEIDNGVVLFDGMLERDV----VSWTGIIVGFGQNGRVEEAFRYFHKMI 536
Query: 399 SQGYEPGQVTYASVINAYCRLSQ-YNKAEKVFEEMEQK-GFDKCVVAYSSMIVMYGRSGR 456
+ G EP +VT+ +++A CR S +A E M+ + G + + Y ++ + G++G
Sbjct: 537 NIGIEPNKVTFLGLLSA-CRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGL 595
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
+ A +L+ KM +P+ ++ SL+ G KN L + E + D YTS
Sbjct: 596 FQEANELINKMP---LEPDKTIWTSLLTACGTHKN-AGLVTVIAEKLLKGFPDDPSVYTS 651
Query: 517 MIGAYSKAGEFETCTEL 533
+ AY+ G ++ +++
Sbjct: 652 LSNAYATLGMWDQLSKV 668
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 166/401 (41%), Gaps = 35/401 (8%)
Query: 230 GYSHIMEAYSKLDDCESVVKLFHEFES--RNLRDSKRYLGQIYG-VLCESLGKCGRVSEA 286
GY H AYS++ L E ++++ L Q +L +SL + G+ A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 287 LEYFRVMTKKG-IFESSVYSTLICSFASLHKVG-EVEELLREAKSRTKIKDPEVYLKLVI 344
L M + G SVY +++ + H++ + L + ++ D + +++
Sbjct: 147 LGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIV 206
Query: 345 MY------VEEDLL-----------EKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
Y V E L+ ++ E ++ MK +C ++GF
Sbjct: 207 SYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNIC--IHGFGCWGDL 264
Query: 388 SAAVRAYEKL------ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
AA+ ++++ + P TY S+I+ C + A V++E++ G +
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
Y +I +S R+ +AM++ +M+ G P+ VYN L+D + + + + +L+ +
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEK 384
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
M + V +Y +I + G E LF + + G +D I+ + G+
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 562 IDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAKW 602
++ VKL+++M+ G +D S + G Q +W
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISS-----LLIGFHKQGRW 480
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 104/504 (20%), Positives = 194/504 (38%), Gaps = 96/504 (19%)
Query: 105 ELAFDYYQRLKDRPV-----FRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDG 159
+ A ++ +K+R F P+ T +I L F K L V ++ K+ PD
Sbjct: 265 DAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDN 324
Query: 160 ATCSKLIEFCIRQRKFKIA-----ETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVL 214
+T LI+ C + + A E N F D+ V + L K
Sbjct: 325 STYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIV----YNCLLDGTLKARKVTEACQ 380
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI-YGVL 273
+FEK+ V Y+ +++ + E+ LF + L+ +++ I + ++
Sbjct: 381 LFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCD-----LKKKGQFVDAITFSIV 435
Query: 274 CESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGE------------- 319
L + G++ A++ M +G + S+L+ F HK G
Sbjct: 436 GLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGF---HKQGRWDWKEKLMKHIRE 492
Query: 320 -------------VEELLREAKSRTKIKDPEV-----YLKLVIMYVEEDLLEKTLEV--- 358
VE L+ +S+ K P +L ++ M ED EV
Sbjct: 493 GNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPM 552
Query: 359 --------------------------------VEAMKDA-DVKVCDCMLCAVVNGFSKRR 385
VEA D+ DV + + L ++ +
Sbjct: 553 EDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLS----KG 608
Query: 386 GFSAAVRAYEKLISQGY-EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAY 444
S A + +E G + TY S+++++ + + A V ++M + + Y
Sbjct: 609 DLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATY 668
Query: 445 SSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKR 504
+ +I G+ GR A ++ ++ ++G ++ +YN+LI+ G+ L + +L++ MK
Sbjct: 669 NVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKS 728
Query: 505 RKVAPDKVSYTSMIGAYSKAGEFE 528
+ PD VSY +MI SKAG+ +
Sbjct: 729 NGINPDVVSYNTMIEVNSKAGKLK 752
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++ G K A ++L QG V Y ++INA + ++ ++A ++F+ M+ G
Sbjct: 671 IIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNG 730
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
+ VV+Y++MI + ++G+L+ A K + M + GC PN V ++++D G+E
Sbjct: 731 INPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN-HVTDTILDYLGKE 782
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 145/350 (41%), Gaps = 17/350 (4%)
Query: 191 VAVFAFGSALRNYNKLHMFRRTVLVFEKLKS-NSVVLDSRGYSHIMEAYSKLDDCESVVK 249
VAV LR + F+R VFEKLK D+ Y+ + + D ++ +
Sbjct: 213 VAVNELLVGLRRADMRSEFKR---VFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALS 269
Query: 250 LFHEFESRNLRDSKRYLGQI--YGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYST 306
LF E + R+ + I Y L L G+ +AL + + G ++S Y
Sbjct: 270 LFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRI 329
Query: 307 LICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDAD 366
LI +++ + + E + + D VY L+ ++ + + ++ E M
Sbjct: 330 LIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEG 389
Query: 367 VKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAE 426
V+ +++G + A + L +G +T++ V CR + A
Sbjct: 390 VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAV 449
Query: 427 KVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMH 486
K+ EEME +GF +V SS+++ + + GR KL+ ++E PNV +N+
Sbjct: 450 KLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA----- 504
Query: 487 GREKNLRQLEKLWNEMKRRKVAPDKVSY---TSMIGAYSKAGEFETCTEL 533
G E +L++ + + + P K S+ SM+G+ E + +
Sbjct: 505 GVEASLKRPQS--KDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPM 552
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 67/140 (47%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++++ F K+ F A +++ TY +I ++ + + A V + + ++
Sbjct: 635 SMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQ 694
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
G +V Y+++I G++ RL A +L MK G P+V YN++I+++ + L++
Sbjct: 695 GGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEA 754
Query: 496 EKLWNEMKRRKVAPDKVSYT 515
K M P+ V+ T
Sbjct: 755 YKYLKAMLDAGCLPNHVTDT 774
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/353 (19%), Positives = 153/353 (43%), Gaps = 9/353 (2%)
Query: 228 SRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEAL 287
SR Y+ +M +K E++V + E ++ L + + + ++ +A+
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-----LTMETFTIAMKAFAAAKERKKAV 249
Query: 288 EYFRVMTKKGIFESSVYSTLICSFASL--HKVGEVEELLREAKSRTKIKDPEVYLKLVIM 345
F +M KK F+ V T+ C SL K+G+ ++L + + Y L+
Sbjct: 250 GIFELM-KKYKFKIGV-ETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNG 307
Query: 346 YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPG 405
+ L + + M D +K ++ G + S A++ + + S+G P
Sbjct: 308 WCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPN 367
Query: 406 QVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVA 465
+Y +I +C+ S A + F++M G Y+ +I +G +L +L+
Sbjct: 368 VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLK 427
Query: 466 KMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
+M+E+G P+ YN+LI + +K +++N+M + ++ P ++ ++ +Y A
Sbjct: 428 EMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVAR 487
Query: 526 EFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
+E +++E G D +++ G+ + + L++M +G +
Sbjct: 488 NYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMK 540
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 111/270 (41%), Gaps = 42/270 (15%)
Query: 381 FSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKC 440
+K R F V E++ ++G + T+ + A+ + KA +FE M++ F
Sbjct: 205 LAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIG 263
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
V + ++ GR+ + A L K+KER PN+ Y L++ R +NL + ++WN
Sbjct: 264 VETINCLLDSLGRAKLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 501 EMKRRKVAPDKV-----------------------------------SYTSMIGAYSKAG 525
+M + PD V SYT MI + K
Sbjct: 323 DMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQS 382
Query: 526 EFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
ET E F++ +G D A+ ++ F ++D + +LL++M+ +G D + Y
Sbjct: 383 SMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYN 442
Query: 586 S-----AWNAFIEAGLQLQAKWLQESFHVS 610
+ A E G ++ K +Q S
Sbjct: 443 ALIKLMANQKMPEHGTRIYNKMIQNEIEPS 472
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/297 (18%), Positives = 122/297 (41%), Gaps = 5/297 (1%)
Query: 161 TCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLK 220
T + L++ R + K A+ L + K + + L + ++ ++ +
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 221 SNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKC 280
+ + D ++ ++E + +KLFH +S+ + R Y ++ K
Sbjct: 326 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS----YTIMIRDFCKQ 381
Query: 281 GRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
+ A+EYF M G+ +++VY+ LI F + K+ V ELL+E + + D + Y
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
L+ + + + E + M +++ ++ + R + ++++I
Sbjct: 442 NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 501
Query: 400 QGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGR 456
+G P +Y +I + +A + EEM KG ++ Y+ + R G+
Sbjct: 502 KGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 128/286 (44%), Gaps = 9/286 (3%)
Query: 304 YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMK 363
Y L S AS K + ++L++ K + E ++ Y + +++ +E+ +
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP 173
Query: 364 DA-----DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCR 418
V V + +L A+ + + F A ++I +G +P + TYA ++N +C
Sbjct: 174 KTLGCQQTVDVYNSLLHALCD----VKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCS 229
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
+ +A++ +EM ++GF+ +I +G L +A ++V+KM + G P++
Sbjct: 230 AGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQT 289
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYR 538
+N LI+ + + +++ + + D +Y ++I A SK G+ + L N
Sbjct: 290 FNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCV 349
Query: 539 INGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
+G ++ ++ + G D DMK++ ++ +Y
Sbjct: 350 EDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVY 395
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 116/312 (37%), Gaps = 51/312 (16%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLG-----QI 269
+ +++K S+ + I+E Y K + V+LF+ + LG +
Sbjct: 133 ILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGV--------PKTLGCQQTVDV 184
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAK 328
Y L +L A R M +KG+ + Y+ L+ + S K+ E +E L E
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM- 243
Query: 329 SRTKIKDPEVYLKLVI-MYVEEDLLEKTLEVVEAM--------------------KDADV 367
SR P L+I + LE E+V M K +V
Sbjct: 244 SRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEV 303
Query: 368 KVCDCM--------LCAVVNGF-------SKRRGFSAAVRAYEKLISQGYEPGQVTYASV 412
+ C M LC ++ + SK A R + G++P YA +
Sbjct: 304 EFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPI 363
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
I CR ++ A F +M+ K Y+ +I M GR G+ +A + +M E G
Sbjct: 364 IKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGL 423
Query: 473 KPNVWVYNSLID 484
P ++ + D
Sbjct: 424 VPISRCFDMVTD 435
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 150/353 (42%), Gaps = 27/353 (7%)
Query: 185 FKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDC 244
F E F++ L Y + F + F+++ D+ ++ ++ Y++ +
Sbjct: 116 FDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEM 171
Query: 245 ESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVY 304
E +LF+ +N + I G + +CG + +A +F+V +G+ +
Sbjct: 172 EKARELFYSMMEKN---EVSWNAMISGYI-----ECGDLEKASHFFKVAPVRGVV---AW 220
Query: 305 STLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKD 364
+ +I + KV E + K T K+ + ++ YVE E L++ AM +
Sbjct: 221 TAMITGYMKAKKVELAEAMF---KDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 365 ADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT-YASVINAYCRLSQYN 423
++ L + + G S+ R +++S+ VT S+I+ YC+ +
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLG-RQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 424 KAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
A K+FE M++K VVA+++MI Y + G A+ L +M + +P+ W+ +
Sbjct: 337 DAWKLFEVMKKKD----VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD-WITFVAV 391
Query: 484 DMHGREKNLRQLEKLWNEMKRR--KVAPDKVSYTSMIGAYSKAGEFETCTELF 534
+ L + + E R KV P YT M+ +AG+ E +L
Sbjct: 392 LLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLI 444
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 114/252 (45%), Gaps = 16/252 (6%)
Query: 282 RVSEALEYFRVMTKKGIFESS--VYSTLI-CSFASLHKVG-EVEELLREAKSRTKIKDPE 337
R + L+ FR M ++GI +S + S L+ CS S ++G ++ +++ ++ T D
Sbjct: 264 RPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS---TLCNDVT 320
Query: 338 VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKL 397
L+ MY + L ++ E MK DV + M ++G+++ A+ + ++
Sbjct: 321 ALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAM----ISGYAQHGNADKALCLFREM 376
Query: 398 ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAYSSMIVMYGRSGR 456
I P +T+ +V+ A N FE M + + Y+ M+ + GR+G+
Sbjct: 377 IDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGK 436
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
L A+KL+ M R P+ V+ +L+ KN+ +L + E + + + Y
Sbjct: 437 LEEALKLIRSMPFR---PHAAVFGTLLGACRVHKNV-ELAEFAAEKLLQLNSQNAAGYVQ 492
Query: 517 MIGAYSKAGEFE 528
+ Y+ +E
Sbjct: 493 LANIYASKNRWE 504
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 112/267 (41%), Gaps = 15/267 (5%)
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
R KD + ++ Y +EK E+ +M + + + A+++G+ +
Sbjct: 149 RMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKN----EVSWNAMISGYIECGDLEK 204
Query: 390 AVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIV 449
A ++ +G V + ++I Y + + AE +F++M +K +V +++MI
Sbjct: 205 ASHFFKVAPVRGV----VAWTAMITGYMKAKKVELAEAMFKDMT---VNKNLVTWNAMIS 257
Query: 450 MYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
Y + R + +KL M E G +PN +S + L+ ++ + + +
Sbjct: 258 GYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN 317
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLL 569
D + TS+I Y K GE +LF + D M+ +++ G D+ + L
Sbjct: 318 DVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGNADKALCLF 373
Query: 570 QDMKMEGTRLDQRLYQSAWNAFIEAGL 596
++M R D + + A AGL
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGL 400
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 158/377 (41%), Gaps = 57/377 (15%)
Query: 170 IRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSR 229
++ F + E LL D + + A+ + + Y ++ + + ++ S+ + LD
Sbjct: 230 VKNGYFDLGEELLEGM--DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 230 GYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEY 289
Y ++ A + +++L + + LR + + L KCG+ EA
Sbjct: 288 TYPSVIRACAT----AGLLQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKCGKFDEARAI 342
Query: 290 FRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE 349
F M K + ++ L+ + S +GE + + +E K + + ++ ++ E
Sbjct: 343 FEKMPAKDLVS---WNALLSGYVSSGHIGEAKLIFKEMKEKNILS----WMIMISGLAEN 395
Query: 350 DLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTY 409
E+ L++ MK + CD FS A+++
Sbjct: 396 GFGEEGLKLFSCMKREGFEPCD-------------YAFSGAIKS---------------- 426
Query: 410 ASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE 469
+V+ AYC QY+ ++ + GFD + A +++I MY + G + A ++ M
Sbjct: 427 CAVLGAYCNGQQYHA------QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP- 479
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFET 529
C +V +N+LI G+ + + ++ EM ++ + PD+++ +++ A S AG +
Sbjct: 480 --CLDSV-SWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQ 536
Query: 530 CTELFNE----YRINGG 542
+ F+ YRI G
Sbjct: 537 GRKYFDSMETVYRIPPG 553
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 7/214 (3%)
Query: 383 KRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVV 442
+R A + +I+ G++P +I+ YC+ S+ N A ++F+E+ + DK +
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEP--DK--I 81
Query: 443 AYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
A ++M+ Y SG + A + K C + +YN++I + L+ +M
Sbjct: 82 ARTTMVSGYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGYSAINLFCKM 139
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFE-TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
K PD ++ S++ + + E C + +G +++ +V V+SK
Sbjct: 140 KHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCAS 199
Query: 562 IDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAG 595
L+ + + E D+R + + +++ G
Sbjct: 200 SPSLLHSARKVFDEILEKDERSWTTMMTGYVKNG 233
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 136/327 (41%), Gaps = 60/327 (18%)
Query: 302 SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEA 361
SVYS S + LH +V + + E KD + ++ YV+ + E++E
Sbjct: 192 SVYSKCASSPSLLHSARKVFDEILE-------KDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINA------ 415
M D ++K+ A+++G+ R + A+ +++S G E + TY SVI A
Sbjct: 245 MDD-NMKLV--AYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGL 301
Query: 416 ----------------------------YCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
Y + ++++A +FE+M K +V+++++
Sbjct: 302 LQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD----LVSWNAL 357
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
+ Y SG + A + +MKE+ + + + L + E+ L KL++ MKR
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGL----KLFSCMKREGF 413
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
P +++ I + + G + + + G + ++ +++K G +++ +
Sbjct: 414 EPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQ 473
Query: 568 LLQDMKMEGTRLDQRLYQSAWNAFIEA 594
+ + M L +WNA I A
Sbjct: 474 VFRTMPC--------LDSVSWNALIAA 492
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 16/228 (7%)
Query: 387 FSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSS 446
S + +++++ G+ +S++N Y + A KVFEEM ++ VV +++
Sbjct: 62 LSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERD----VVHWTA 117
Query: 447 MIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
MI Y R+G + A LV +M+ +G KP +L++M + QL+ L +
Sbjct: 118 MIGCYSRAGIVGEACSLVNEMRFQGIKPGP---VTLLEMLSGVLEITQLQCLHDFAVIYG 174
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
D SM+ Y K +LF++ D M+ ++ VG + +++
Sbjct: 175 FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYASVGNMSEIL 230
Query: 567 KLLQDMKMEGTRLDQRLYQSAWNAF-----IEAGLQLQAKWLQESFHV 609
KLL M+ +G R DQ+ + ++ + +E G L + ++ F V
Sbjct: 231 KLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV 278
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/441 (20%), Positives = 177/441 (40%), Gaps = 90/441 (20%)
Query: 155 VLPDGATCSKLIEFCIRQRKFKIA-----ETLLNAFKSDSEVAVFAFGSALRN-YNKLHM 208
+LPD T L++ C ++ + L+N F SD F S+L N Y K +
Sbjct: 42 LLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSD-----FYISSSLVNLYAKFGL 96
Query: 209 FRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYL-- 266
VFE+++ VV ++ ++ YS+ L +E + ++ L
Sbjct: 97 LAHARKVFEEMRERDVV----HWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLE 152
Query: 267 -----------------GQIYGVLCES---------LGKCGRVSEALEYFRVMTKKGIFE 300
IYG C+ KC V +A + F M ++ +
Sbjct: 153 MLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVS 212
Query: 301 SSVYSTLICSFASLHKVGEVEELLREAK-----------------SRTKIK--------- 334
++T+I +AS+ + E+ +LL + S T
Sbjct: 213 ---WNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHC 269
Query: 335 -------DPEVYLK--LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRR 385
D +++LK L+ MY++ E + V+E + + DV VC +++G +
Sbjct: 270 QIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV-VC---WTVMISGLMRLG 325
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
A+ + +++ G + ASV+ + +L ++ V + + G+ A +
Sbjct: 326 RAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALN 385
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR 505
S+I MY + G L ++ + +M ER ++ +N++I + + +L + L+ EMK +
Sbjct: 386 SLITMYAKCGHLDKSLVIFERMNER----DLVSWNAIISGYAQNVDLCKALLLFEEMKFK 441
Query: 506 KVAP-DKVSYTSMIGAYSKAG 525
V D + S++ A S AG
Sbjct: 442 TVQQVDSFTVVSLLQACSSAG 462
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/429 (19%), Positives = 172/429 (40%), Gaps = 59/429 (13%)
Query: 185 FKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDC 244
F E V S +R + + + VF +++ + D+ Y +++A S
Sbjct: 74 FNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSG-QSW 132
Query: 245 ESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGR--VSEALEYFRVMTKKGIFESS 302
VVK+ H + S Y + L + +CG V +A++ F M+++ ++
Sbjct: 133 LPVVKMMHNHIEKLGLSSDIY---VPNALIDCYSRCGGLGVRDAMKLFEKMSER---DTV 186
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
+++++ ++ + L E R I + ++ Y + K E+ E M
Sbjct: 187 SWNSMLGGLVKAGELRDARRLFDEMPQRDLIS----WNTMLDGYARCREMSKAFELFEKM 242
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
+ + M V G+SK A ++K+ VT+ +I Y
Sbjct: 243 PERNTVSWSTM----VMGYSKAGDMEMARVMFDKMPLPAKN--VVTWTIIIAGYAEKGLL 296
Query: 423 NKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL 482
+A+++ ++M G A S++ SG L M++ + +K N +V N+L
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNAL 356
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRING- 541
+DM+ + NL++ ++N++ ++ D VS+ +M+ G + ELF+ R G
Sbjct: 357 LDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGI 412
Query: 542 -----------------GVIDRAMA------------------GIMVGVFSKVGQIDQLV 566
G+ID + G +V + +VG++ + +
Sbjct: 413 RPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAI 472
Query: 567 KLLQDMKME 575
K++Q M ME
Sbjct: 473 KVVQTMPME 481
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 161/361 (44%), Gaps = 40/361 (11%)
Query: 193 VFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFH 252
+ ++ + L Y + + +FEK+ + V +S ++ YSK D E +F
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPERNTV----SWSTMVMGYSKAGDMEMARVMFD 271
Query: 253 E--FESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLI- 308
+ ++N+ + ++ + G + EA M G+ F+++ +++
Sbjct: 272 KMPLPAKNV--------VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 309 -CSFASLHKVG-EVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDAD 366
C+ + L +G + +L+ + + + V L+ MY + L+K +V + D
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGS---NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 367 VKVCDCMLCAV-VNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKA 425
+ + ML + V+G K A+ + ++ +G P +VT+ +V+ + ++
Sbjct: 381 LVSWNTMLHGLGVHGHGKE-----AIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 426 EKVFEEMEQKGFDKC--VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
F ME K +D V Y ++ + GR GRL+ A+K+V M +PNV ++ +L+
Sbjct: 436 IDYFYSME-KVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMP---MEPNVVIWGALL 491
Query: 484 D---MHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRIN 540
MH E ++ + E L N +K P S S I Y+ A ++E ++ ++ +
Sbjct: 492 GACRMH-NEVDIAK-EVLDNLVKLDPCDPGNYSLLSNI--YAAAEDWEGVADIRSKMKSM 547
Query: 541 G 541
G
Sbjct: 548 G 548
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/259 (20%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 338 VYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKL 397
Y L+ Y +E L EK ++ MK+ ++ +++ ++K ++L
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQEL 184
Query: 398 ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG-FDKCVVAYSSMIVMYGRSGR 456
++ P TY + A + + E+V EEM + G YS+M +Y +G
Sbjct: 185 KAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGL 244
Query: 457 LRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTS 516
+ A K + +++ + + + Y LI ++GR L ++ ++W ++ V+Y +
Sbjct: 245 SQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLN 304
Query: 517 MIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
MI K + LF E++ N D + +++G +++ G I + +L + G
Sbjct: 305 MIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRG 364
Query: 577 TRLDQRLYQSAWNAFIEAG 595
+L+ + ++ + ++++G
Sbjct: 365 GKLNAKTWEIFMDYYVKSG 383
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 180/449 (40%), Gaps = 54/449 (12%)
Query: 185 FKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDC 244
FK+ V A+ S +R + +F + + F +++++ D + ++++ + + D
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 245 ---ESVVKLFHEFESRNLRDSKRYLGQ-IYGVLCESLGKCGRVS--EALEYFRVMTKKGI 298
ESV H F R D Y G + + + LG ++S + T
Sbjct: 122 RFGESV----HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSG 177
Query: 299 FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEV 358
E T I F + V V E++ KD Y ++ Y + + E L +
Sbjct: 178 DEDVKAETCIMPFG-IDSVRRVFEVMPR-------KDVVSYNTIIAGYAQSGMYEDALRM 229
Query: 359 VEAMKDADVKVCDCMLCAV---------------VNGFSKRRGF---------------- 387
V M D+K L +V ++G+ R+G
Sbjct: 230 VREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK 289
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
SA + E++ S+ Y +++ S++ Y + +YN+A ++F +M VA+SS+
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSV 349
Query: 448 IVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKV 507
I L +L + G N+++ ++L+DM+ + N++ K+++ M
Sbjct: 350 IPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN---- 405
Query: 508 APDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVK 567
D+VS+T++I ++ G LF E + G ++ ++ S VG +D+
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 568 LLQDM-KMEGTRLDQRLYQSAWNAFIEAG 595
M K+ G + Y + + AG
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 132/289 (45%), Gaps = 35/289 (12%)
Query: 335 DPEVYL--KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVR 392
D +VY+ LV MY + +E + V + D ++V G+ + ++ A+R
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD----GISWNSLVAGYVQNGRYNEALR 329
Query: 393 AYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYG 452
+ ++++ +PG V ++SVI A L+ + +++ + + GF + S+++ MY
Sbjct: 330 LFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYS 389
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVW---VYNSLIDMHGREKNLRQLEKLWNEMKRRKVAP 509
+ G ++ A K+ +M NV + ++I H + + L+ EMKR+ V P
Sbjct: 390 KCGNIKAARKIFDRM-------NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKP 442
Query: 510 DKVSYTSMIGAYSKAGEFETCTELFNE----YRINGGVIDRAMAGIMVGVFSKVGQIDQL 565
++V++ +++ A S G + FN Y +N + A ++G + G++++
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG---RAGKLEEA 499
Query: 566 VKLLQDMKMEGTRLDQRLYQSAWNAFIEA-----GLQLQAKWLQESFHV 609
+ M +E T S W+ + + L+L K ++ F V
Sbjct: 500 YNFISKMCVEPT-------GSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
++P TY ++ A C + Y + +++ +EM+ G + +S++I M G SG + A+
Sbjct: 522 FKPTTATYNILLKA-CG-TDYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAV 579
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
+++ M G +P+V Y + I + K L+ L+ EM+R ++ P+ V+Y +++ A
Sbjct: 580 RILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKAR 639
Query: 522 SKAG---EFETCTELFNEYRING 541
SK G E C ++ + R G
Sbjct: 640 SKYGSLLEVRQCLAIYQDMRNAG 662
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/303 (18%), Positives = 135/303 (44%), Gaps = 27/303 (8%)
Query: 250 LFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLIC 309
++ + N++ + + + V LG +V + ++ V + + Y+ L+
Sbjct: 289 IYEDLLKENIKPNIYVINSLMNVNSHDLGYTLKVYKNMQILDVTA-----DMTSYNILLK 343
Query: 310 SFASLHKVGEVEELLREAK---SRTKIK-DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDA 365
+ +V +++ +EAK S +K D Y ++ ++ + + + L+V + MK
Sbjct: 344 TCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSV 403
Query: 366 DVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKA 425
V ++++ + A +E++++ G EP + +++A QY++A
Sbjct: 404 GVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRA 463
Query: 426 EKVFEEMEQKGFDKCVVAYSSMIVMYGRS-----------GRL--RNAMKLVAKMKERGC 472
++F+ + ++ + Y+ IV GR+ G L RN+ + +R C
Sbjct: 464 FRLFQSWKGSSVNESL--YADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFC 521
Query: 473 -KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
KP YN L+ G + + ++L +EMK ++P++++++++I +G+ E
Sbjct: 522 FKPTTATYNILLKACGTD--YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAV 579
Query: 532 ELF 534
+
Sbjct: 580 RIL 582
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 172/422 (40%), Gaps = 73/422 (17%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
V+ ++++ + ++ S +++ Y K + + +LF E+ + NL LC
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD------------LC 305
Query: 275 ESLG----KCGRVSEALEYFRVMTKKGI-------------------------------- 298
++ + G EAL F +M G+
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 299 --FES--SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
FES ++ + LI + H+ + ++T + + +V YVE ++
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV----TWNSIVAGYVENGEVDA 421
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ-GYEPGQVTYASVI 413
E E M + ++ + ++ +V G F A+ + + SQ G VT S+
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQG----SLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
+A L + A+ ++ +E+ G V ++++ M+ R G +AM + + R
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--- 534
Query: 474 PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTEL 533
+V + + I N + +L+++M + + PD V++ + A S G + E+
Sbjct: 535 -DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 534 F-NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
F + +++G + G MV + + G +++ V+L++DM ME + WN+ +
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV-------IWNSLL 646
Query: 593 EA 594
A
Sbjct: 647 AA 648
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 131/311 (42%), Gaps = 16/311 (5%)
Query: 276 SLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLI---CSFASLHKVGEVEELLREAKSRT 331
SL C + E + R +TK+G+ + S + L+ C + + +E+ ++S
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 332 KIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAV 391
+Y L+ Y L + + + M ++ + ++ +K R +
Sbjct: 98 TCF---MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGI 154
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
+ + ++ GY S+++ Y + + A KVF+EM ++ VV+++SMI Y
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN----VVSWTSMICGY 210
Query: 452 GRSGRLRNAMKLVAKM-KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
R ++A+ L +M ++ PN +I + ++L EK++ ++ + +
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
+ ++++ Y K + LF+EY G + + M + + G + + +
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEY----GASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 571 DMKMEGTRLDQ 581
M G R D+
Sbjct: 327 LMMDSGVRPDR 337
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 170/374 (45%), Gaps = 65/374 (17%)
Query: 239 SKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGI 298
K+D E +LF++ ++D+ + ++G L + G+V +AL+ F+ M K +
Sbjct: 142 GKVDQAE---RLFYQMP---VKDTAAWNSMVHGYL-----QFGKVDDALKLFKQMPGKNV 190
Query: 299 FESSVYSTLICSFASLHKVGEVEELLREA-----KSRTK------------------IKD 335
++T+IC + GE +L + KS ++ I+
Sbjct: 191 IS---WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQV 247
Query: 336 PEVYLKLVIMYVEEDLLEKTL--------EVVEAMKDADVKVCD--CMLCAVVNGFSKRR 385
+ +KL +Y E+ + +L + ++ K D KV + + A+++G+S +
Sbjct: 248 HGLIIKLGFLY--EEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYS 445
A+ + ++ P Q T+AS +N+ L + +++ + G + +
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 446 SMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI---DMHGREKNLRQLEKLWNEM 502
S++VMY SG + +A+ + K+ K ++ +NS+I HGR K ++ +M
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKI----FKKSIVSWNSIIVGCAQHGRGK---WAFVIFGQM 418
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV--IDRAMA--GIMVGVFSK 558
R PD++++T ++ A S G E +LF Y ++ G+ IDR + MV + +
Sbjct: 419 IRLNKEPDEITFTGLLSACSHCGFLEKGRKLF--YYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 559 VGQIDQLVKLLQDM 572
G++ + +L++ M
Sbjct: 477 CGKLKEAEELIERM 490
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 169/401 (42%), Gaps = 44/401 (10%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYF 290
Y+ ++++ + V+ LF E + L L V+ +S+G+ +V E +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLP----VVLKSIGRLRKVIEGEKVH 69
Query: 291 RVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEE 349
K G+ F+S V ++L+ +ASL K+ ++ E R D + L+ YV
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQR----DVVSWNGLISSYVGN 125
Query: 350 DLLEKTLEVVEAM-KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVT 408
E + V + M +++++K + + + ++ S + R Y ++++ +E
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE-FEMSVRI 184
Query: 409 YASVINAYCRLSQYNKAEKVFEEMEQKGFDKC---------------------------- 440
++++ +C+ +KA VF+ M K KC
Sbjct: 185 GNALVDMFCKCGCLDKARAVFDSMRDKNV-KCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
VV +++M+ Y + R A++L M+ G +P+ +V SL+ + L Q + +
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 501 EMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVG 560
+ +V DKV T+++ Y+K G ET E+F E + D A ++ + G
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER----DTASWTSLIYGLAMNG 359
Query: 561 QIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQLQAK 601
+ + L +M+ G RLD + + A G + +
Sbjct: 360 MSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGR 400
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 115/261 (44%), Gaps = 21/261 (8%)
Query: 282 RVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEE--LLREAKSRTKIK-DPEV 338
R EALE FR M GI + L+ + G +E+ + + ++ D V
Sbjct: 259 RFDEALELFRCMQTAGIRPDNF--VLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVV 316
Query: 339 YLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV-VNGFSKRRGFSAAVRAYEKL 397
LV MY + +E LEV +K+ D ++ + +NG S R A+ Y ++
Sbjct: 317 GTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR-----ALDLYYEM 371
Query: 398 ISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME-----QKGFDKCVVAYSSMIVMYG 452
+ G +T+ +V+ A + K+F M Q + C S +I +
Sbjct: 372 ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHC----SCLIDLLC 427
Query: 453 RSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKV 512
R+G L A +L+ KM+ + V VY SL+ N++ E++ ++++ +V+ D
Sbjct: 428 RAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS-DSS 486
Query: 513 SYTSMIGAYSKAGEFETCTEL 533
++T + Y+ A +E T +
Sbjct: 487 AHTLLASVYASANRWEDVTNV 507
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 105/510 (20%), Positives = 204/510 (40%), Gaps = 91/510 (17%)
Query: 152 IYHVLPDGA-TCSKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFR 210
+++ LP + S++I C R R L+ F S + VF S + ++K+ M
Sbjct: 31 VFNSLPRQSYWASRIISCCTRLRAPSYYTRLI--FDSVTFPNVFVVNSMFKYFSKMDMAN 88
Query: 211 RTVLVFEKLK---------SNSVVLDSRGY---------------------SHIMEAYSK 240
+ ++E+ S VV+ S G + IM+ Y K
Sbjct: 89 DVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVK 148
Query: 241 LDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFE 300
+ ES K+F + R G + V+ K G EA + F +M + +
Sbjct: 149 HESVESARKVFDQISQRK--------GSDWNVMISGYWKWGNKEEACKLFDMMPENDVVS 200
Query: 301 SSVYSTLICSFASLHKV----------------------------GEVEELLREAKS--R 330
++ +I FA + + G E+ LR R
Sbjct: 201 ---WTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLR 257
Query: 331 TKIKDPEVYLKLVIM---YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGF 387
++ E +VI + + L ++L V+ + + V++ + A+++ +K R
Sbjct: 258 LGVRPNETTWVIVISACSFRADPSLTRSL--VKLIDEKRVRLNCFVKTALLDMHAKCRDI 315
Query: 388 SAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM 447
+A R + +L G + VT+ ++I+ Y R+ + A ++F+ M ++ VV+++S+
Sbjct: 316 QSARRIFNEL---GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN----VVSWNSL 368
Query: 448 IVMYGRSGRLRNAMKLVAKMKERG-CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRK 506
I Y +G+ A++ M + G KP+ S++ G +L + + + +++ +
Sbjct: 369 IAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ 428
Query: 507 VAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLV 566
+ + Y S+I Y++ G +F+E + D + F+ G + +
Sbjct: 429 IKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVETL 484
Query: 567 KLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
LL MK EG D+ Y S A AGL
Sbjct: 485 NLLSKMKDEGIEPDRVTYTSVLTACNRAGL 514
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQG-YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQ 434
+++ G++ + A+ +E +I G +P +VT SV++A ++ + + + + +
Sbjct: 367 SLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRK 426
Query: 435 KGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQ 494
Y S+I MY R G L A ++ +MKER +V YN+L + +
Sbjct: 427 NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKER----DVVSYNTLFTAFAANGDGVE 482
Query: 495 LEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYR 538
L ++MK + PD+V+YTS++ A ++AG + +F R
Sbjct: 483 TLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR 526
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 95/196 (48%), Gaps = 5/196 (2%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
V++ + R A +IS+G PG + V++A + ++A++V + ME +G
Sbjct: 378 VIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRG 437
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
V Y+ +I Y + G + A +++A+ K++ K + Y++LI + + + +
Sbjct: 438 LKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEAL 497
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYS-KAGEFETCTELFNEYRINGGVIDRAMAGIMVGV 555
KL NEM R V P+ Y +I ++ KA ++E LF E + G + I G+
Sbjct: 498 KLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG----LHLNAISQGL 553
Query: 556 FSKVGQIDQLVKLLQD 571
V +++ K+ +D
Sbjct: 554 IRAVKEMESEAKVTED 569
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 84/183 (45%), Gaps = 1/183 (0%)
Query: 410 ASVINAYCRL-SQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMK 468
A++I A C+ A+++ ++ + + + +S +I R +++A L+ M
Sbjct: 340 ATLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMI 399
Query: 469 ERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE 528
+G P V+N ++ + +L + +++ M+ R + PD +YT +I Y+K G +
Sbjct: 400 SKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMD 459
Query: 529 TCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAW 588
E+ E + + ++ + K+ + D+ +KLL +M G + + Y
Sbjct: 460 EAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Query: 589 NAF 591
+F
Sbjct: 520 QSF 522
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 171/402 (42%), Gaps = 49/402 (12%)
Query: 108 FDYYQRLKDR---PVFRPEKSTLKHVIRYLMRFKKWDF---ILSVSEDFKIYHVLPDGAT 161
DY ++ DR P S ++ + + K +DF ILS D K PD T
Sbjct: 56 LDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLK-----PDNYT 110
Query: 162 CSKLIEFC--IRQRKFKI---AETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVF 216
+ L++ C +R R+ + T+ F +D V + Y +L VF
Sbjct: 111 VNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQT----GLISLYAELGCLDSCHKVF 166
Query: 217 EKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCES 276
+ V + ++ A ++ D KLF E RD + I G
Sbjct: 167 NSIPCPDFVCRTA----MVTACARCGDVVFARKLF---EGMPERDPIAWNAMISG----- 214
Query: 277 LGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKS---RTKI 333
+ G EAL F +M +G+ + V +I ++ ++G +++ R A S R KI
Sbjct: 215 YAQVGESREALNVFHLMQLEGVKVNGV--AMISVLSACTQLGALDQG-RWAHSYIERNKI 271
Query: 334 K-DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAV-VNGFSKRRGFSAAV 391
K + LV +Y + +EK +EV M++ +V L + +NGF ++ +
Sbjct: 272 KITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEK-----CL 326
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAYSSMIVM 450
+ + G P VT+ SV+ + ++ ++ F+ M + G + + Y ++ +
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 451 YGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNL 492
Y R+GRL +A+ ++ +M KP+ V++SL+ KNL
Sbjct: 387 YARAGRLEDAVSIIQQMP---MKPHAAVWSSLLHASRMYKNL 425
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/288 (18%), Positives = 123/288 (42%), Gaps = 39/288 (13%)
Query: 335 DPEVYLKLVIMYVEEDLLEKTLEVVEAMKDAD-----VKVCDCMLC-------------- 375
DP V L+ +Y E L+ +V ++ D V C C
Sbjct: 142 DPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMP 201
Query: 376 --------AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEK 427
A+++G+++ A+ + + +G + V SV++A +L ++
Sbjct: 202 ERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRW 261
Query: 428 VFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHG 487
+E+ V ++++ +Y + G + AM++ M+E+ NV+ ++S ++
Sbjct: 262 AHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEK----NVYTWSSALNGLA 317
Query: 488 REKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDR- 546
+ +L++ MK+ V P+ V++ S++ S G + F+ R G+ +
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377
Query: 547 AMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
G +V ++++ G+++ V ++Q M M + + + W++ + A
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPM-------KPHAAVWSSLLHA 418
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 12/203 (5%)
Query: 374 LCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME 433
+CAV RR A+R + L +GY P + +SVI++ C ++++A + F
Sbjct: 64 ICAV------RRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFL 117
Query: 434 QKGF----DKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGRE 489
GF C V + ++ L +L+ KE P++ YN L++
Sbjct: 118 ASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKE--FVPSLTNYNRLMNQLCTI 175
Query: 490 KNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMA 549
+ KL +M+ R PD V++T++IG Y + E E ++F+E R+ G +
Sbjct: 176 YRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTL 235
Query: 550 GIMVGVFSKVGQIDQLVKLLQDM 572
+++G F K+ ++ KL++++
Sbjct: 236 SVLIGGFLKMRDVETGRKLMKEL 258
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/543 (18%), Positives = 215/543 (39%), Gaps = 46/543 (8%)
Query: 62 SNTPMLDVDNVNNIAGSHQQYSNPGTENLNEF---LCGLFQDPKTEELAFDYYQRLKDRP 118
S +P+ + ++ + G +++ P N N LC +++ +L FD R
Sbjct: 138 SRSPVSTLGVIHRLIGFKKEFV-PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNR----- 191
Query: 119 VFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIA 178
P+ T +I ++ + V ++ ++ + P+ T S LI ++ R +
Sbjct: 192 GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETG 251
Query: 179 ETLLNAF------KSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYS 232
L+ ++D+ + AF + + + + F + E + V Y
Sbjct: 252 RKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYG 311
Query: 233 HIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALE---- 288
H++++ + ++ + +S+ L+ + I LC+ G C R + LE
Sbjct: 312 HMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKD-GGCMRAYQLLEEGSE 370
Query: 289 ---YFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELL--REAKSRTKIKDPEVYLK-L 342
+ T K + ES +C K V EL+ +E RT+I + +YL+ L
Sbjct: 371 FEFFPSEYTYKLLMES------LCKELDTGKARNVLELMLRKEGADRTRIYN--IYLRGL 422
Query: 343 VIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGY 402
+M D + L V+ +M D + + L V+NG K A++ + +++ +
Sbjct: 423 CVM----DNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Query: 403 -EPGQVTYASVINAYCRLSQYNKAEKVFEE----MEQKGFDKCVVAYSSMIVMYGRSGRL 457
P VT +V+ C L +AE+ + M + VVAY+++I + +
Sbjct: 479 CAPDAVTLNTVM---CGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKG 535
Query: 458 RNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSM 517
AM + ++++ + Y +ID + +K W+++ D Y +
Sbjct: 536 DEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAF 595
Query: 518 IGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
+ ++G + +G + + ++ S+ G + ++L++M+ G
Sbjct: 596 LKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQ 655
Query: 578 RLD 580
D
Sbjct: 656 APD 658
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 172/422 (40%), Gaps = 73/422 (17%)
Query: 215 VFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLC 274
V+ ++++ + ++ S +++ Y K + + +LF E+ + NL LC
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLD------------LC 305
Query: 275 ESLG----KCGRVSEALEYFRVMTKKGI-------------------------------- 298
++ + G EAL F +M G+
Sbjct: 306 NAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR 365
Query: 299 --FES--SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEK 354
FES ++ + LI + H+ + ++T + + +V YVE ++
Sbjct: 366 NGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVV----TWNSIVAGYVENGEVDA 421
Query: 355 TLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ-GYEPGQVTYASVI 413
E E M + ++ + ++ +V G F A+ + + SQ G VT S+
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQG----SLFEEAIEVFCSMQSQEGVNADGVTMMSIA 477
Query: 414 NAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCK 473
+A L + A+ ++ +E+ G V ++++ M+ R G +AM + + R
Sbjct: 478 SACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNR--- 534
Query: 474 PNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTEL 533
+V + + I N + +L+++M + + PD V++ + A S G + E+
Sbjct: 535 -DVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEI 593
Query: 534 F-NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFI 592
F + +++G + G MV + + G +++ V+L++DM ME + WN+ +
Sbjct: 594 FYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV-------IWNSLL 646
Query: 593 EA 594
A
Sbjct: 647 AA 648
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/311 (18%), Positives = 131/311 (42%), Gaps = 16/311 (5%)
Query: 276 SLGKCGRVSEALEYFRVMTKKGI-FESSVYSTLI---CSFASLHKVGEVEELLREAKSRT 331
SL C + E + R +TK+G+ + S + L+ C + + +E+ ++S
Sbjct: 38 SLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYG 97
Query: 332 KIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAV 391
+Y L+ Y L + + + M ++ + ++ +K R +
Sbjct: 98 TCF---MYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGI 154
Query: 392 RAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMY 451
+ + ++ GY S+++ Y + + A KVF+EM ++ VV+++SMI Y
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERN----VVSWTSMICGY 210
Query: 452 GRSGRLRNAMKLVAKM-KERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPD 510
R ++A+ L +M ++ PN +I + ++L EK++ ++ + +
Sbjct: 211 ARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVN 270
Query: 511 KVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQ 570
+ ++++ Y K + LF+EY G + + M + + G + + +
Sbjct: 271 DLMVSALVDMYMKCNAIDVAKRLFDEY----GASNLDLCNAMASNYVRQGLTREALGVFN 326
Query: 571 DMKMEGTRLDQ 581
M G R D+
Sbjct: 327 LMMDSGVRPDR 337
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 137/298 (45%), Gaps = 14/298 (4%)
Query: 284 SEALEYFRVMTKKGI-FESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYL-- 340
SEAL+ F M +G F S+++ + E ++L S D +Y+
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKL--HCLSVKTCIDLNLYVGT 201
Query: 341 KLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQ 400
L+ +Y + +++ ++V E+M+D M V G+ + + + A+ Y +
Sbjct: 202 ALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM----VAGYVQNKNYEEALLLYRRAQRM 257
Query: 401 GYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNA 460
E Q T +SVI A L+ + +++ + + GF V SS + MY + G LR +
Sbjct: 258 SLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRES 317
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
+ ++++E+ N+ ++N++I + +++ L+ +M++ + P++V+++S++
Sbjct: 318 YIIFSEVQEK----NLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 373
Query: 521 YSKAGEFETCTELFNEYRINGGVIDRAMA-GIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
G E F R G+ + MV + + G + + +L++ + + T
Sbjct: 374 CGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPT 431
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 155/365 (42%), Gaps = 31/365 (8%)
Query: 179 ETLLNAFKSDSEVAVFAFGSALRNYNKL-HMFRRTVLV------FEKLKSNSVVLDSRGY 231
E +L ++ S++ F F + + N L HM+ + F ++ VV +
Sbjct: 131 ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVV----SW 186
Query: 232 SHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFR 291
+ ++ Y K E+ ++F E RNL + ++ K +A++ F
Sbjct: 187 TSMVAGYCKCGMVENAREMFDEMPHRNLFT--------WSIMINGYAKNNCFEKAIDLFE 238
Query: 292 VMTKKGIFES-SVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEED 350
M ++G+ + +V ++I S A L + E + + LV M+
Sbjct: 239 FMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCG 298
Query: 351 LLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYA 410
+EK + V E + + D +++ G + A+ + ++IS G+ P VT+
Sbjct: 299 DIEKAIHVFEGLPETD----SLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFT 354
Query: 411 SVINAYCRLSQYNKAEKVFEEMEQ-KGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKE 469
+V++A K +++E M++ G + + Y ++ M GR+G+L A + KM
Sbjct: 355 AVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMH- 413
Query: 470 RGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMI-GAYSKAGEFE 528
KPN + +L+ KN E++ N + KV P+ Y ++ Y+ AG+++
Sbjct: 414 --VKPNAPILGALLGACKIYKNTEVAERVGNMLI--KVKPEHSGYYVLLSNIYACAGQWD 469
Query: 529 TCTEL 533
L
Sbjct: 470 KIESL 474
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/403 (17%), Positives = 154/403 (38%), Gaps = 50/403 (12%)
Query: 154 HVLPDGATCSKLIEFCIRQRKFKIAETLLN----AFKSDSEVAVFAFGSALRNYNKLHMF 209
H++ D S+L+ C+ F LL F +F F +R ++
Sbjct: 39 HLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEP 98
Query: 210 RRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQI 269
+ + ++ + + D+ + +++A S+++ C V + H S+ +R + +
Sbjct: 99 SKAFGFYTQMLKSRIWPDNITFPFLIKASSEME-CVLVGEQTH---SQIVRFGFQNDVYV 154
Query: 270 YGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKS 329
L CG ++ A R+ + G + +++++ + V E+ E
Sbjct: 155 ENSLVHMYANCGFIAAA---GRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPH 211
Query: 330 RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSA 389
R + ++ Y + + EK +++ E MK V + ++ +V++ +
Sbjct: 212 RNLF----TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 390 AVRAYEKLISQGY-------------------------------EPGQVTYASVINAYCR 418
RAYE ++ E ++++S+I
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKM-KERGCKPNVW 477
+KA F +M GF V +++++ G + +++ M K+ G +P +
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 478 VYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
Y ++DM GR L + E N + + V P+ +++GA
Sbjct: 388 HYGCIVDMLGRAGKLAEAE---NFILKMHVKPNAPILGALLGA 427
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 117/237 (49%), Gaps = 22/237 (9%)
Query: 362 MKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQ 421
M+D D+ + ++ + +R S A+ +++ SQG+ P T+ S++ A ++
Sbjct: 274 MEDKDLITWNTLISEL-----ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAA 328
Query: 422 YNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNS 481
N +++ + ++GF+K V +++I MY + G + ++ ++ ++ +R N+ + S
Sbjct: 329 LNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDR---RNLVSWTS 385
Query: 482 LIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN----EY 537
++ +G + +L+++M + PD++ + +++ A AG E + FN EY
Sbjct: 386 MMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEY 445
Query: 538 RINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
IN DR + +V + + G+I + +L++ M + +S W A + A
Sbjct: 446 GINP---DRDIYNCVVDLLGRAGKIGEAYELVERMPFKPD-------ESTWGAILGA 492
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 97/233 (41%), Gaps = 34/233 (14%)
Query: 394 YEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK------------------ 435
+ +I +G++ S+++ YCR ++A+ F EME K
Sbjct: 236 HASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSS 295
Query: 436 ------------GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLI 483
GF ++S++ L +L ++ RG NV + N+LI
Sbjct: 296 EALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALI 355
Query: 484 DMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV 543
DM+ + N+ ++++ E+ R+ + VS+TSM+ Y G ELF++ +G
Sbjct: 356 DMYAKCGNIPDSQRVFGEIVDRR---NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIR 412
Query: 544 IDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME-GTRLDQRLYQSAWNAFIEAG 595
DR + ++ G +++ +K M+ E G D+ +Y + AG
Sbjct: 413 PDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 105/250 (42%), Gaps = 22/250 (8%)
Query: 373 MLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEM 432
M C GF K A+ + ++ +P Y ++INA CR+ + KA + ++M
Sbjct: 172 MKCLGEEGFVKE-----ALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 433 EQKGF--DKCVVAYSSMIVMYGRSG-----------RLRNAMKLVAKMKERGCKPNVWVY 479
+ GF Y+ +I Y R G R+ A ++ +M RG P+V Y
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 480 NSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRI 539
N LID + + + +L+ +MK + P++V+Y S I YS E E E+ +
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Query: 540 NG-GVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGLQL 598
G GV + ++ + + + L+ +M G + Y+ +A GL
Sbjct: 347 LGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEGL-- 404
Query: 599 QAKWLQESFH 608
A L E H
Sbjct: 405 -ASTLDEELH 413
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 19/189 (10%)
Query: 417 CRLSQYNKAEKVFEEMEQ---KGFDKCVVAYSSMIVM---YGRSGRLRNAMKLVAKMKER 470
C L++ N + +++ + Q + K VV +S+ + G G ++ A+ +MKE
Sbjct: 135 CLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEY 194
Query: 471 GCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR--KVAPDKVSYTSMIGAYSKAGEFE 528
CKP+V+ YN++I+ R N ++ L ++M+ + PD +YT +I +Y + G
Sbjct: 195 HCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQT 254
Query: 529 TC-----------TELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGT 577
C +F E G V D ++ K +I + ++L +DMK +G
Sbjct: 255 GCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGC 314
Query: 578 RLDQRLYQS 586
+Q Y S
Sbjct: 315 VPNQVTYNS 323
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 2/164 (1%)
Query: 384 RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVA 443
RR A R + +++ +G+ P VTY +I+ C+ ++ +A ++FE+M+ KG V
Sbjct: 261 RRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVT 320
Query: 444 YSSMIVMYGRSGRLRNAMKLVAKMKERGCK-PNVWVYNSLIDMHGREKNLRQLEKLWNEM 502
Y+S I Y + + A++++ MK+ G P Y LI + + L EM
Sbjct: 321 YNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 503 KRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDR 546
+ P + +Y + A S G T E ++ R+ G+ R
Sbjct: 381 VEAGLVPREYTYKLVCDALSSEGLASTLDEELHK-RMREGIQQR 423
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 27/218 (12%)
Query: 364 DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYN 423
+A + C+ A++ S+RRG S + Y ++ G + V +
Sbjct: 194 NAQISTCN----ALITEVSRRRGASNGYKMYREVF--GLDDVSV---------------D 232
Query: 424 KAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKER-GCKPNVWVYNSL 482
+A+K+ +++ ++SM+V + R G ++ +M+E GC PNV+ YN L
Sbjct: 233 EAKKMIGKIKPNA-----TTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVL 287
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGG 542
++ + + + EK+W EMK R V D V+Y +MIG E ELF + + G
Sbjct: 288 MEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI 347
Query: 543 VIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLD 580
+V + K G +D + + ++MK +G D
Sbjct: 348 ECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEAD 385
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 6/137 (4%)
Query: 460 AMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRR-KVAPDKVSYTSMI 518
A K++ K+K PN +NS++ RE +E++W EM+ +P+ SY ++
Sbjct: 234 AKKMIGKIK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLM 288
Query: 519 GAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR 578
AY G +++ E ++ G V D M+G ++ + +L +DM ++G
Sbjct: 289 EAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIE 348
Query: 579 LDQRLYQSAWNAFIEAG 595
Y+ N + +AG
Sbjct: 349 CTCLTYEHLVNGYCKAG 365
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 114/261 (43%), Gaps = 13/261 (4%)
Query: 324 LREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEA------MKDADVKVCDCMLCAV 377
R+ S K+ D + LV D K+ +VV A M + DV M
Sbjct: 156 FRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSM---- 211
Query: 378 VNGFSKRRGFSAAVRAYEKLISQGY-EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
++G+ KR ++ A+ +++++ G + +VT SVI A L N+ + V +
Sbjct: 212 IDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH 271
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
V+ +S+I MY + G + +A + + + +W N++I +R+
Sbjct: 272 LPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW--NAIIGGLASHGFIRESL 329
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
+L+++M+ K+ PD++++ ++ A S G + F + +G MV V
Sbjct: 330 QLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVL 389
Query: 557 SKVGQIDQLVKLLQDMKMEGT 577
S+ G + + +M ++ T
Sbjct: 390 SRAGLVKDAHDFISEMPIKPT 410
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
V+ GFS R ++ Y +++ G P +TY ++ + RLS + + + G
Sbjct: 79 VIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSG 138
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
+ + +++I MYG +A KL +M + N+ +NS++D + + ++
Sbjct: 139 LEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK----NLVTWNSILDAYAKSGDVVSAR 194
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
+++EM R D V+++SMI Y K GE+ E+F++
Sbjct: 195 LVFDEMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQ 230
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/414 (23%), Positives = 175/414 (42%), Gaps = 51/414 (12%)
Query: 163 SKLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSN 222
S LI I A +LL F S+ V+ + S +R+Y + + +F + S
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPP-SDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSL 121
Query: 223 SVVLDSRGYSHIMEAYSKLD-----DCESVVKLFHEFES---------------RNLRDS 262
S D+ + + +A ++ + + L F S R+L D+
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 263 KRYLGQI-------YGVLCESLGKCGRVSEALEYFRVMTKK-GIFESSVYSTLI-----C 309
++ ++ + + ES K G+ ALE F MT + G ++ TL+ C
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNI--TLVNVLPPC 239
Query: 310 SFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKV 369
+ H +G+ +L A + I++ V LV MY + ++++ V M DV
Sbjct: 240 ASLGTHSLGK--QLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 370 CDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVF 429
+ A+V G+S+ F AVR +EK+ + + VT+++ I+ Y + +A V
Sbjct: 298 WN----AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVC 353
Query: 430 EEMEQKGFDKCVVAYSSMIVMYGRSGRLRN-------AMKLVAKMKERGCKPNVWVYNSL 482
+M G V S++ G L + A+K +++ G V N L
Sbjct: 354 RQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQL 413
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE 536
IDM+ + K + +++ + ++ D V++T MIG YS+ G+ EL +E
Sbjct: 414 IDMYAKCKKVDTARAMFDSLSPKE--RDVVTWTVMIGGYSQHGDANKALELLSE 465
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 111/252 (44%), Gaps = 11/252 (4%)
Query: 285 EALEYFRVMTKKG--IFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKL 342
EA++ F+ + K I S Y+++ + + L ++ +A R+ I L
Sbjct: 369 EAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESAL 428
Query: 343 VIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGY 402
+ MY + L+ EV E+M + D+ A ++G + S A+R +EK++S G
Sbjct: 429 ITMYSKCGCLDDANEVFESMDNPDIVA----WTAFISGHAYYGNASEALRLFEKMVSCGM 484
Query: 403 EPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK-GFDKCVVAYSSMIVMYGRSGRLRNAM 461
+P VT+ +V+ A + + + M +K + Y MI +Y RSG L A+
Sbjct: 485 KPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
K MK +P+ + + KNL +L ++ E R+ D Y Y
Sbjct: 545 KF---MKNMPFEPDAMSWKCFLSGCWTHKNL-ELGEIAGEELRQLDPEDTAGYVLPFNLY 600
Query: 522 SKAGEFETCTEL 533
+ AG++E E+
Sbjct: 601 TWAGKWEEAAEM 612
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 112/251 (44%), Gaps = 51/251 (20%)
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+V+ + K F +A RA++++ EP V+++++I+ YC++SQ+ +A K F+ + K
Sbjct: 326 LVDFYIKCSSFESACRAFQEI----REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKN 381
Query: 437 ------------FDKCVV------------------------AYSSMIVMYGRSGRLRNA 460
F C V S++I MY + G L +A
Sbjct: 382 ASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDA 441
Query: 461 MKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGA 520
++ M P++ + + I H N + +L+ +M + P+ V++ +++ A
Sbjct: 442 NEVFESMD----NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTA 497
Query: 521 YSKAGEFET---CTE-LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEG 576
S AG E C + + +Y + ID M+ ++++ G +D+ +K +++M E
Sbjct: 498 CSHAGLVEQGKHCLDTMLRKYNV-APTIDH--YDCMIDIYARSGLLDEALKFMKNMPFEP 554
Query: 577 TRLDQRLYQSA 587
+ + + S
Sbjct: 555 DAMSWKCFLSG 565
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 95/233 (40%), Gaps = 8/233 (3%)
Query: 352 LEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYAS 411
L + E ++ M A V V + + R S ++++ P +
Sbjct: 64 LNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 412 VINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG 471
V+ YC A+K+F+EM + V+ ++MI Y G L A+ L + M G
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSELN----AVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 472 CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
KP +Y +L+ + L ++ + R + + T ++ Y K G
Sbjct: 180 DKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAK 239
Query: 532 ELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLY 584
+F++ + V A G+MVG +++ G+ +KL D+ EG D ++
Sbjct: 240 RVFDQMAVKKPV---ACTGLMVG-YTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/359 (19%), Positives = 146/359 (40%), Gaps = 45/359 (12%)
Query: 267 GQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEE-LLR 325
GQ+ + SL K +++EA E+ + M K G+ SS + C F + ++ + L
Sbjct: 48 GQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSY--SYQCLFEACRELRSLSHGRLL 105
Query: 326 EAKSRTKIKDPEVYLK---------------------------------LVIMYVEEDLL 352
+ R I++P V L+ ++ Y E+ +L
Sbjct: 106 HDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGIL 165
Query: 353 EKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASV 412
+K + + M + K M ++ R + + +I G +
Sbjct: 166 DKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGI 225
Query: 413 INAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGC 472
+N Y + A++VF++M K VA + ++V Y ++GR R+A+KL + G
Sbjct: 226 VNMYVKCGWLVGAKRVFDQMAVKK----PVACTGLMVGYTQAGRARDALKLFVDLVTEGV 281
Query: 473 KPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTE 532
+ + +V++ ++ + L +++ + + + + T ++ Y K FE+
Sbjct: 282 EWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACR 341
Query: 533 LFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTR-LDQRLYQSAWNA 590
F E R D + + I+ G + ++ Q ++ VK + ++ + L+ Y S + A
Sbjct: 342 AFQEIREPN---DVSWSAIISG-YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQA 396
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 144/344 (41%), Gaps = 33/344 (9%)
Query: 209 FRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQ 268
R +FE++KS + D ++ +++ Y + D LF + ++ G
Sbjct: 384 LERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKD--------GV 432
Query: 269 IYGVLCESLGKCGRVSEALEYFRVMTKKGIFE-SSVYSTLICSFASLHKVGEVEELLREA 327
+ V+ L + +EA M + G+ +S YS L+ S + + + + +
Sbjct: 433 TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVI 492
Query: 328 KSRTKIKDPEVYLK--LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRR 385
T DP++ L+ LV MY + +E E+ M D + M + G S
Sbjct: 493 AKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSM----IMGLSHHG 548
Query: 386 GFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEME-----QKGFDKC 440
A+ +++++ G +P VT+ V++A + ++F+ M+ Q G D
Sbjct: 549 LADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDH- 607
Query: 441 VVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWN 500
Y SMI + GR+G+L+ A + ++ + P+ VY +L+ + G + E +
Sbjct: 608 ---YISMIDLLGRAGKLKEAEEFISALP---FTPDHTVYGALLGLCGLNWRDKDAEGIAE 661
Query: 501 EMKRRKVAPDKVS---YTSMIGAYSKAGEFETCTELFNEYRING 541
R + D V+ + ++ Y+ G + E+ E I G
Sbjct: 662 RAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKG 705
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 158/389 (40%), Gaps = 52/389 (13%)
Query: 231 YSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESL----GKCGRVSEA 286
++ ++ Y+K + LF RN+ V C ++ KC R++EA
Sbjct: 80 WTSLLSKYAKTGYLDEARVLFEVMPERNI------------VTCNAMLTGYVKCRRMNEA 127
Query: 287 LEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMY 346
FR M K + +V T +C + + EL E R + + LV
Sbjct: 128 WTLFREMPKN-VVSWTVMLTALCDDG---RSEDAVELFDEMPERNVVS----WNTLVTGL 179
Query: 347 VEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQ 406
+ +EK +V +AM DV + M + G+ + G A + L E
Sbjct: 180 IRNGDMEKAKQVFDAMPSRDVVSWNAM----IKGYIENDGMEEA----KLLFGDMSEKNV 231
Query: 407 VTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAK 466
VT+ S++ YCR +A ++F EM ++ +V++++MI + + R A+ L +
Sbjct: 232 VTWTSMVYGYCRYGDVREAYRLFCEMPERN----IVSWTAMISGFAWNELYREALMLFLE 287
Query: 467 MKE--RGCKPNVWVYNSLI-DMHGREKNLRQL-EKLWNEM---KRRKVAPDKVSYTSMIG 519
MK+ PN SL G R+L E+L ++ V D S++
Sbjct: 288 MKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVH 347
Query: 520 AYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRL 579
Y+ +G + L NE D I++ + K G +++ L + +K +
Sbjct: 348 MYASSGLIASAQSLLNES------FDLQSCNIIINRYLKNGDLERAETLFERVK---SLH 398
Query: 580 DQRLYQSAWNAFIEAGLQLQAKWLQESFH 608
D+ + S + ++EAG +A L + H
Sbjct: 399 DKVSWTSMIDGYLEAGDVSRAFGLFQKLH 427
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 182/463 (39%), Gaps = 45/463 (9%)
Query: 147 SED-FKIYHVLPDGATCS--KLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNY 203
SED +++ +P+ S L+ IR + A+ + +A S V ++ + ++ Y
Sbjct: 154 SEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRD---VVSWNAMIKGY 210
Query: 204 NKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSK 263
+ L+F + +VV ++ ++ Y + D +LF E RN+
Sbjct: 211 IENDGMEEAKLLFGDMSEKNVVT----WTSMVYGYCRYGDVREAYRLFCEMPERNIVS-- 264
Query: 264 RYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVG-EVEE 322
+ I G L + EAL F M K S TLI + +G E
Sbjct: 265 -WTAMISGFAWNELYR-----EALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 323 LLREAKSR-------TKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLC 375
L + ++ T D + LV MY L+ ++ + D++ C+
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNI--- 373
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
++N + K A +E++ S +V++ S+I+ Y ++A +F QK
Sbjct: 374 -IINRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLF----QK 425
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
DK V ++ MI ++ A L++ M G KP Y+ L+ G NL Q
Sbjct: 426 LHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQG 485
Query: 496 EKLWNEMKRRKVA--PDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMV 553
+ + + + PD + S++ Y+K G E E+F + D M+
Sbjct: 486 KHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNSMI 541
Query: 554 GVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEAGL 596
S G D+ + L ++M G + + + +A +GL
Sbjct: 542 MGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGL 584
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 99/201 (49%), Gaps = 5/201 (2%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
A++ GF++ A+ + ++ S+ +P TY SVI A LS + A+ + + +
Sbjct: 408 AMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS 467
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
DK V ++++ MY + G + A + M ER +V +N++ID +G +
Sbjct: 468 CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER----HVTTWNAMIDGYGTHGFGKAA 523
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGV-IDRAMAGIMVG 554
+L+ EM++ + P+ V++ S+I A S +G E + F + N + + G MV
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVD 583
Query: 555 VFSKVGQIDQLVKLLQDMKME 575
+ + G++++ + M ++
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVK 604
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 150/379 (39%), Gaps = 48/379 (12%)
Query: 261 DSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEV 320
DSK L +Y + + K + +AL++F M + E VY+ F L KV
Sbjct: 96 DSK--LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDV-EPVVYN-----FTYLLKVCGD 147
Query: 321 EELLREAKS-RTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCA--- 376
E LR K + L L M E++ K +V EA K D ++ + L +
Sbjct: 148 EAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD-RMPERDLVSWNT 206
Query: 377 VVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKG 436
+V G+S+ A+ + + + +P +T SV+ A L + +++ + G
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 437 FDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLE 496
FD V ++++ MY + G L A +L M ER NV +NS+ID + + +N ++
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAM 322
Query: 497 KLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFE---------------------------- 528
++ +M V P VS + A + G+ E
Sbjct: 323 LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 529 -TCTELFNEYRINGGVIDRAMA--GIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQ 585
C E+ + G + R + M+ F++ G+ + M+ + D Y
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYV 442
Query: 586 SAWNAFIEAGLQLQAKWLQ 604
S A E + AKW+
Sbjct: 443 SVITAIAELSITHHAKWIH 461
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 116/267 (43%), Gaps = 23/267 (8%)
Query: 277 LGKCGRVSEALEYFRVMTKKGIFESSVYST-LICSFASLHKVGEVEELLREAKSRTKIKD 335
L +C + E + ++ K G+++ + T L+ F V E + S+ +
Sbjct: 44 LERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV-- 101
Query: 336 PEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFS---KRRGFSAAVR 392
+Y ++ + + L+K L+ M+ DV+ VV F+ K G A +R
Sbjct: 102 --LYHTMLKGFAKVSDLDKALQFFVRMRYDDVE-------PVVYNFTYLLKVCGDEAELR 152
Query: 393 AYEK----LISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMI 448
++ L+ G+ + N Y + Q N+A KVF+ M ++ +V++++++
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERD----LVSWNTIV 208
Query: 449 VMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVA 508
Y ++G R A+++V M E KP+ S++ + + +++ R
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD 268
Query: 509 PDKVSYTSMIGAYSKAGEFETCTELFN 535
T+++ Y+K G ET +LF+
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFD 295
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 342 LVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQG 401
LV MY + D + V E + D + C+ +G+ K AV +E++ +G
Sbjct: 201 LVDMYAKCDRISDARRVFEWIVDPNTVCWTCLF----SGYVKAGLPEEAVLVFERMRDEG 256
Query: 402 YEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAM 461
+ P + + +VIN Y RL + A +F EM VVA++ MI +G+ G A+
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPD----VVAWNVMISGHGKRGCETVAI 312
Query: 462 KLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAY 521
+ M++ K S++ G NL + E + +A + +S++ Y
Sbjct: 313 EYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMY 372
Query: 522 SKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQ 581
SK + E ++F V A M+ ++ G+ ++++L DMK G +D
Sbjct: 373 SKCEKMEAAAKVFEALEEKNDVFWNA----MIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 582 RLYQS 586
+ S
Sbjct: 429 FTFTS 433
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 104/219 (47%), Gaps = 13/219 (5%)
Query: 376 AVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQK 435
+++G S+ + A++ Y+++ G P Q T+ +V+ LS + + +
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL 761
Query: 436 GFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQL 495
D + +++I MY + G ++ + ++ +M+ R NV +NSLI+ + +
Sbjct: 762 AHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRR---SNVVSWNSLINGYAKNGYAEDA 818
Query: 496 EKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF----NEYRINGGVIDRAMAGI 551
K+++ M++ + PD++++ ++ A S AG+ ++F +Y I V A
Sbjct: 819 LKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVD 878
Query: 552 MVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNA 590
++G + + + D ++ Q++K D RL+ S A
Sbjct: 879 LLGRWGYLQEADDFIE-AQNLKP-----DARLWSSLLGA 911
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 142/346 (41%), Gaps = 50/346 (14%)
Query: 202 NYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRD 261
Y K + VLVFE+++ D + ++ Y +L + LF E S ++
Sbjct: 235 GYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDV-- 292
Query: 262 SKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVE 321
+ V+ GK G + A+EYF M K SSV ST + L +G V
Sbjct: 293 ------VAWNVMISGHGKRGCETVAIEYFFNMRK-----SSVKSTRSTLGSVLSAIGIVA 341
Query: 322 ELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGF 381
L L LV+ E ++ +++ V ++V+ +
Sbjct: 342 NL---------------DLGLVV----------HAEAIKLGLASNIYVGS----SLVSMY 372
Query: 382 SKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
SK AA + +E L E V + ++I Y + +K ++F +M+ G++
Sbjct: 373 SKCEKMEAAAKVFEAL----EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDD 428
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
++S++ S L + + + ++ N++V N+L+DM+ + L +++
Sbjct: 429 FTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRA 547
M R D V++ ++IG+Y + +LF + G V D A
Sbjct: 489 MCDR----DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/560 (15%), Positives = 218/560 (38%), Gaps = 87/560 (15%)
Query: 104 EELAFDYYQRLKDRPVFRPEKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCS 163
E +A +Y+ ++ V + +STL V+ + D L V + + + S
Sbjct: 308 ETVAIEYFFNMRKSSV-KSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGS 366
Query: 164 KLIEFCIRQRKFKIAETLLNAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNS 223
L+ + K + A + A + ++V + + +R Y + + +F +KS+
Sbjct: 367 SLVSMYSKCEKMEAAAKVFEALEEKNDVF---WNAMIRGYAHNGESHKVMELFMDMKSSG 423
Query: 224 VVLDSRGYSHIMEAYSKLDDCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRV 283
+D ++ ++ + D E + FH + ++G L + KCG +
Sbjct: 424 YNIDDFTFTSLLSTCAASHDLE-MGSQFHSIIIKKKLAKNLFVGN---ALVDMYAKCGAL 479
Query: 284 SEALEYFRVMTKKGIFESSVYSTLICSFASLHKVGEVEELLREA---------------- 327
+A + F M + ++ ++T+I S+ E +L +
Sbjct: 480 EDARQIFERMCDR---DNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTL 536
Query: 328 KSRTKI-------------------KDPEVYLKLVIMYVEEDLLEKTLEVVEAMKDADVK 368
K+ T + +D L+ MY + +++ +V ++ + V
Sbjct: 537 KACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV- 595
Query: 369 VCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKV 428
+ A++ G+S+ AV +++++++G P ++T+A+++ A + +
Sbjct: 596 ---VSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQF 651
Query: 429 FEEMEQKGFD---------------------------------KCVVAYSSMIVMYGRSG 455
++ ++GF K +V ++ M+ + ++G
Sbjct: 652 HGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNG 711
Query: 456 RLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYT 515
A+K +M+ G P+ + +++ + +LR+ + + + D+++
Sbjct: 712 FYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN 771
Query: 516 SMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKME 575
++I Y+K G+ + +++F+E R V+ ++ ++K G + +K+ M+
Sbjct: 772 TLIDMYAKCGDMKGSSQVFDEMRRRSNVVSW---NSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 576 GTRLDQRLYQSAWNAFIEAG 595
D+ + A AG
Sbjct: 829 HIMPDEITFLGVLTACSHAG 848
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/296 (19%), Positives = 114/296 (38%), Gaps = 40/296 (13%)
Query: 271 GVLCESLGKCGRVSEALEYFRVM---------------TKKGIFESSV------------ 303
G L + KC R+S+A F + K G+ E +V
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 304 -----YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEV 358
+ T+I ++ L K+ + L E S D + ++ + + +E
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETVAIEY 314
Query: 359 VEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCR 418
M+ + VK L +V++ + + + I G +S+++ Y +
Sbjct: 315 FFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSK 374
Query: 419 LSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWV 478
+ A KVFE +E+K V +++MI Y +G M+L MK G + +
Sbjct: 375 CEKMEAAAKVFEALEEKN----DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFT 430
Query: 479 YNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
+ SL+ +L + + + ++K+A + +++ Y+K G E ++F
Sbjct: 431 FTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 140/334 (41%), Gaps = 50/334 (14%)
Query: 248 VKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKG-IFESSVYST 306
++L E + R R +G+L ++L + G V A E R M++ I + +YS
Sbjct: 160 LELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSR 219
Query: 307 LICSFASLHK-------VGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVV 359
L+ S HK +G +E+L R+ + ++D V ++ + VE ++ + V+
Sbjct: 220 LLSSVCK-HKDSSCFDVIGYLEDL-RKTRFSPGLRDYTVVMRFL---VEGGRGKEVVSVL 274
Query: 360 EAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRL 419
MK CD EP V Y V+
Sbjct: 275 NQMK------CD-----------------------------RVEPDLVCYTIVLQGVIAD 299
Query: 420 SQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVY 479
Y KA+K+F+E+ G V Y+ I + + A+K+++ M + G +PNV Y
Sbjct: 300 EDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTY 359
Query: 480 NSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNE-YR 538
N LI + +L + + LW EM+ V + ++ MI AY + E L E +
Sbjct: 360 NILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFN 419
Query: 539 INGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDM 572
+N V + ++ + K G +DQ V+LL +
Sbjct: 420 MNVFVKSSRIEEVISRLCEK-GLMDQAVELLAHL 452
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 133/314 (42%), Gaps = 50/314 (15%)
Query: 281 GRVSEALEYFRVMTKKGIFESSV-YSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVY 339
GR EA F+ + + G S + Y+TL+ + + G + ++ E + D +
Sbjct: 59 GRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 340 LKLVIMYVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLIS 399
++ + E +E ++ + MK+ + ++ G+ G + +L+
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY----GIAGKPERSSELLD 174
Query: 400 QGYEPGQV-------TYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSM----- 447
E G V T+ ++ A+C+ + +A +V ++ME+ G V Y+++
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYV 234
Query: 448 ---------------IVM-----------------YGRSGRLRNAMKLVAKMKERGCKPN 475
+VM Y R GR+R+ ++ V +MKE + N
Sbjct: 235 QKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEAN 294
Query: 476 VWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFN 535
+ V+NSLI+ + ++++ MK V D ++Y++++ A+S AG E ++F
Sbjct: 295 LVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFK 354
Query: 536 EYRINGGVIDRAMA 549
E + GV A A
Sbjct: 355 EM-VKAGVKPDAHA 367
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/403 (19%), Positives = 163/403 (40%), Gaps = 46/403 (11%)
Query: 123 EKSTLKHVIRYLMRFKKWDFILSVSEDFKIYHVLPDGATCSKLIEFCIRQRKFKIAETLL 182
E ++ ++ L++ K+ L ++ Y+ L G + E R ++ + +L
Sbjct: 127 ESGNMEDAVQALLKMKE----LGLNPTTSTYNTLIKGYGIAGKPE-----RSSELLDLML 177
Query: 183 NAFKSDSEVAVFAFGSALRNYNKLHMFRRTVLVFEKLKSNSVVLDSRGYSHIMEAYSKLD 242
D + F ++ + K V +K++ V D+ Y+ I Y +
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY--VQ 235
Query: 243 DCESVVKLFHEFESRNLRDSKRYLGQIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESS 302
E+V E +++ + G+ G++ + GRV + L + R M E
Sbjct: 236 KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMK-----EMR 290
Query: 303 VYSTLICSFASLHKVGEVEELLREAKSRTKIKDPEVYLKLVIMYVEEDLLEKTLEVVEAM 362
V + L+ V+ L+ +VE + EV+ M
Sbjct: 291 VEANLV-----------------------------VFNSLINGFVEVMDRDGIDEVLTLM 321
Query: 363 KDADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQY 422
K+ +VK V+N +S A + +++++ G +P Y+ + Y R +
Sbjct: 322 KECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEP 381
Query: 423 NKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSL 482
KAE++ E + + VV ++++I + +G + +AM++ KM + G PN+ + +L
Sbjct: 382 KKAEELLETLIVESRPN-VVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETL 440
Query: 483 IDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAG 525
+ + K + E++ M+ V P+ ++ + A+ AG
Sbjct: 441 MWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAG 483
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 145/326 (44%), Gaps = 12/326 (3%)
Query: 268 QIYGVLCESLGKCGRVSEALEYFRVMTKKGIFESSV-YSTL-ICSFASLHKVGEVEELLR 325
+ + VL ++ K +V EA E + M + G+ +V Y+T+ C V E++
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 326 EAKSRTKIKDPEVYLKLVIM-YVEEDLLEKTLEVVEAMKDADVKVCDCMLCAVVNGFSK- 383
+ + K K +V+ Y E + L V MK+ V+ + +++NGF +
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEV 308
Query: 384 --RRGFSAAVRAYEKLISQGYEPGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCV 441
R G + ++ + +TY++V+NA+ KA +VF+EM + G
Sbjct: 309 MDRDGIDEVLTLMKEC---NVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDA 365
Query: 442 VAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNE 501
AYS + Y R+ + A +L+ + +PNV ++ ++I ++ +++N+
Sbjct: 366 HAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNK 424
Query: 502 MKRRKVAPDKVSYTSMIGAYSKAGEFETCTELFNEYRINGGVIDRAMAGIMVGVFSKVGQ 561
M + V+P+ ++ +++ Y + + E+ R G + + ++ + G
Sbjct: 425 MCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGL 484
Query: 562 IDQLVKLLQDMKMEGTRLD--QRLYQ 585
D+ K + +K + + ++LYQ
Sbjct: 485 TDESNKAINALKCKDIEIAKLEKLYQ 510
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/194 (18%), Positives = 95/194 (48%), Gaps = 5/194 (2%)
Query: 412 VINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERG 471
++N + ++A+ VF+ + + G +++Y++++ + + +V+++++ G
Sbjct: 51 LMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSG 110
Query: 472 CKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCT 531
K + +N++I+ N+ + +MK + P +Y ++I Y AG+ E +
Sbjct: 111 TKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSS 170
Query: 532 ELFN----EYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSA 587
EL + E ++ G R ++V + K ++++ ++++ M+ G R D Y +
Sbjct: 171 ELLDLMLEEGNVDVGPNIRTF-NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTI 229
Query: 588 WNAFIEAGLQLQAK 601
+++ G ++A+
Sbjct: 230 ATCYVQKGETVRAE 243
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 116/254 (45%), Gaps = 4/254 (1%)
Query: 356 LEVVEAMK-DADVKVCDCMLCAVVNGFSKRRGFSAAVRAYEKLISQGYEPGQVTYASVIN 414
LE+ E M D+K+ ++ SK RG ++A + +E + Q G S+++
Sbjct: 113 LEICEWMVVQEDIKLQAGDYAVHLDLISKIRGLNSAEKFFEDMPDQ--MRGHAACTSLLH 170
Query: 415 AYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKLVAKMKERGCKP 474
+Y + +KAE +FE+M + GF K + Y+ M+ MY G+ L+ ++K R P
Sbjct: 171 SYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSP 229
Query: 475 NVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSKAGEFETCTELF 534
++ YN + ++ EK++ + K K+ PD V+Y+ + Y+K E
Sbjct: 230 DIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLAL 289
Query: 535 NEYRINGGVIDRAMAGIMVGVFSKVGQIDQLVKLLQDMKMEGTRLDQRLYQSAWNAFIEA 594
E +R ++ + + +G D + + +K +++ Y S +A ++
Sbjct: 290 KEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKL 349
Query: 595 GLQLQAKWLQESFH 608
G QAK L + +
Sbjct: 350 GEFEQAKGLYDEWE 363
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 70/153 (45%)
Query: 404 PGQVTYASVINAYCRLSQYNKAEKVFEEMEQKGFDKCVVAYSSMIVMYGRSGRLRNAMKL 463
P VTY + A+ + AEKV+ + +++ + V YS + +Y ++ + A
Sbjct: 229 PDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLA 288
Query: 464 VAKMKERGCKPNVWVYNSLIDMHGREKNLRQLEKLWNEMKRRKVAPDKVSYTSMIGAYSK 523
+ +M++ K N Y SLI +H + + W ++K + Y SMI A K
Sbjct: 289 LKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVK 348
Query: 524 AGEFETCTELFNEYRINGGVIDRAMAGIMVGVF 556
GEFE L++E+ G D + +++ +
Sbjct: 349 LGEFEQAKGLYDEWESVSGTGDARIPNLILAEY 381