Miyakogusa Predicted Gene

Lj0g3v0262659.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262659.2 Non Chatacterized Hit- tr|K4AXZ7|K4AXZ7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,59.72,4e-19,LONG-CHAIN-FATTY ACID-COA LIGASE PROTEIN, PUTATIVE 
ACYL-COA SYNTHETASE, PUTATIV,NULL; FAMILY NOT NA,CUFF.17294.2
         (101 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G35930.1 | Symbols:  | AMP-dependent synthetase and ligase fa...    97   3e-21

>AT5G35930.1 | Symbols:  | AMP-dependent synthetase and ligase
           family protein | chr5:14067197-14074404 REVERSE
           LENGTH=1040
          Length = 1040

 Score = 96.7 bits (239), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 44/71 (61%), Positives = 55/71 (77%)

Query: 13  GLSNRFLWMQGMYPLTGRELLLFKSSISFIDHLQEFLSAILTACVLVIPPFRELRENVYS 72
           GL NRFLWMQ +YP+ G +   FK+S+ FIDH+QEFL AIL++  LVIPPF  L+EN+ S
Sbjct: 126 GLLNRFLWMQELYPVVGEQRFAFKTSVGFIDHIQEFLGAILSSTALVIPPFTLLKENMIS 185

Query: 73  IIDFLQAYSCS 83
           IIDFL+ YS S
Sbjct: 186 IIDFLEEYSIS 196