Miyakogusa Predicted Gene

Lj0g3v0262599.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0262599.2 Non Chatacterized Hit- tr|I1MVA1|I1MVA1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32333
PE,74.54,0,XendoU,Endoribonuclease XendoU; seg,NULL; EndoU-like,NULL;
SUBFAMILY NOT NAMED,NULL; PLACENTAL PROTE,CUFF.17292.2
         (431 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G17100.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Endoribonu...   520   e-148
AT4G17100.2 | Symbols:  | EXPRESSED IN: 23 plant structures; EXP...   503   e-143

>AT4G17100.1 | Symbols:  | CONTAINS InterPro DOMAIN/s:
           Endoribonuclease XendoU (InterPro:IPR018998); Has 943
           Blast hits to 770 proteins in 162 species: Archae - 0;
           Bacteria - 61; Metazoa - 472; Fungi - 40; Plants - 78;
           Viruses - 35; Other Eukaryotes - 257 (source: NCBI
           BLink). | chr4:9610164-9612513 REVERSE LENGTH=434
          Length = 434

 Score =  520 bits (1340), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 278/444 (62%), Positives = 324/444 (72%), Gaps = 23/444 (5%)

Query: 1   MEGLIKGLADVILGANXXXXXXXXXX---XXXEERSRSSWAEVVXXXXXXXXXXXXXXXX 57
           M+GLI+GL DV +G N                +ERSRS+WA VV                
Sbjct: 1   MDGLIRGLVDVAIGGNQRRGGDDGGDDEGNSRDERSRSTWANVVSGEEEDQNRAGG---- 56

Query: 58  XXXXRFSNRPHREKEEEESWRDDSYSHKEKYRPQREECESESFNSPNRPPKL-----IED 112
                 S+   R+  EE  W         ++    EE + E+  +     K       ++
Sbjct: 57  ------SSHGRRQNSEENQWEKKGERLPTRHSQSHEEDQEENTYAAKVSEKQDFSESQQE 110

Query: 113 NNDGWQTVGK--PSRQTHKVPKENWNSYKLPADEQQYSNEVEAGAGVEPSQSELGDLSRA 170
            NDGW+TVGK  P+RQ+HKV KE W  YK PA EQ YS+EVE    +EPSQ EL  LS A
Sbjct: 111 ENDGWETVGKKKPARQSHKVQKEQWQDYKRPASEQHYSDEVETYGNLEPSQLELSGLSEA 170

Query: 171 CEKLWDLDSNRLVPGKDYEIDCGEGKKAYQKQDMAQGSLFTWVSDDVFRKPTFARFLSLL 230
           C KLW+LD NRLVPG+DY+IDCG+GK+ +++ DMA+G LF+WVS++V RKPTFARF SLL
Sbjct: 171 CNKLWELDLNRLVPGRDYQIDCGDGKRVHERADMAEGLLFSWVSEEVSRKPTFARFCSLL 230

Query: 231 DNYNPHQGSKEVVTSEERQEQASFIEEISRTAPIKYLHKFLVSKGIASGSYQDFKRMMTS 290
           DNYNP++G KEVVT EERQEQA+FIEEISRT+ IKYLH++LV K +A GSY +FKRM+TS
Sbjct: 231 DNYNPNEGYKEVVTEEERQEQAAFIEEISRTSVIKYLHRYLVLKDVAPGSYLEFKRMLTS 290

Query: 291 LWFDLYGRGGTSGSSSAFEHVFVGEIKQQG--EVSGFHNWLQFYLEEAKGRVDYQGYLFP 348
           LWFDLYGRGGTSGSSSAFEHVFVGEIKQ G  +VSGFHNWLQFYLEEAKG VDYQGY+FP
Sbjct: 291 LWFDLYGRGGTSGSSSAFEHVFVGEIKQSGGEQVSGFHNWLQFYLEEAKGTVDYQGYIFP 350

Query: 349 RRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYAGEEDNHIQLGP 408
           RRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFE+ALYT+CF+ G EDNHIQLGP
Sbjct: 351 RRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTMCFFMGTEDNHIQLGP 410

Query: 409 YEINVKCYRLG-ERIGSVFPIAES 431
           Y +NVKCYRLG  RIGS FPIAES
Sbjct: 411 YNVNVKCYRLGNNRIGSAFPIAES 434


>AT4G17100.2 | Symbols:  | EXPRESSED IN: 23 plant structures;
           EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
           DOMAIN/s: Endoribonuclease XendoU (InterPro:IPR018998).
           | chr4:9610164-9612513 REVERSE LENGTH=437
          Length = 437

 Score =  503 bits (1296), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 250/326 (76%), Positives = 284/326 (87%), Gaps = 5/326 (1%)

Query: 111 EDNNDGWQTVGK--PSRQTHKVPKENWNSYKLPADEQQYSNEVEAGAGVEPSQSELGDLS 168
           ++ NDGW+TVGK  P+RQ+HKV KE W  YK PA EQ YS+EVE    +EPSQ EL  LS
Sbjct: 112 QEENDGWETVGKKKPARQSHKVQKEQWQDYKRPASEQHYSDEVETYGNLEPSQLELSGLS 171

Query: 169 RACEKLWDLDSNRLVPGKDYEIDCGEGKKAYQKQDMAQGSLFTWVSDDVFRKPTFARFLS 228
            AC KLW+LD NRLVPG+DY+IDCG+GK+ +++ DMA+G LF+WVS++V RKPTFARF S
Sbjct: 172 EACNKLWELDLNRLVPGRDYQIDCGDGKRVHERADMAEGLLFSWVSEEVSRKPTFARFCS 231

Query: 229 LLDNYNPHQGSKEVVTSEERQEQASFIEEISRTAPIKYLHKFLVSKGIASGSYQDFKRMM 288
           LLDNYNP++G KEVVT EERQEQA+FIEEISRT+ IKYLH++LV K +A GSY +FKRM+
Sbjct: 232 LLDNYNPNEGYKEVVTEEERQEQAAFIEEISRTSVIKYLHRYLVLKDVAPGSYLEFKRML 291

Query: 289 TSLWFDLYGRGGTSGSSSAFEHVFVGEIKQQG--EVSGFHNWLQFYLEEAKGRVDYQGYL 346
           TSLWFDLYGRGGTSGSSSAFEHVFVGEIKQ G  +VSGFHNWLQFYLEEAKG VDYQGY+
Sbjct: 292 TSLWFDLYGRGGTSGSSSAFEHVFVGEIKQSGGEQVSGFHNWLQFYLEEAKGTVDYQGYI 351

Query: 347 FPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFEIALYTLCFYAGEEDNHIQL 406
           FPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFE+ALYT+CF+ G EDNHIQL
Sbjct: 352 FPRRRGEIPDSETQLLTIQFEWNGVLKSVSSTLVGVSPEFELALYTMCFFMGTEDNHIQL 411

Query: 407 GPYEINVKCYRLG-ERIGSVFPIAES 431
           GPY +NVKCYRLG  RIGS FPIAES
Sbjct: 412 GPYNVNVKCYRLGNNRIGSAFPIAES 437