Miyakogusa Predicted Gene
- Lj0g3v0262169.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0262169.1 tr|G7I998|G7I998_MEDTR Pentatricopeptide repeat
protein OS=Medicago truncatula GN=MTR_1g059280 PE=4 ,80.35,0,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; seg,NULL;
PPR,Pentatricopeptide repea,CUFF.17256.1
(653 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 876 0.0
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 459 e-129
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 448 e-126
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 447 e-125
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 443 e-124
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 436 e-122
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 434 e-122
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 434 e-122
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 432 e-121
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 432 e-121
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 431 e-121
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 430 e-120
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 429 e-120
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 427 e-120
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 427 e-120
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 426 e-119
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 426 e-119
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 426 e-119
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 424 e-118
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 422 e-118
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 418 e-117
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 417 e-117
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 417 e-116
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 416 e-116
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 413 e-115
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 413 e-115
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 411 e-115
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 407 e-113
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 403 e-112
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 400 e-111
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 400 e-111
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 400 e-111
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-110
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 394 e-110
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 393 e-109
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 391 e-109
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 391 e-109
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 390 e-108
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 390 e-108
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 388 e-108
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 387 e-107
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 385 e-107
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 385 e-107
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 385 e-107
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 384 e-107
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 382 e-106
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 382 e-106
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 377 e-105
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 376 e-104
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 372 e-103
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 372 e-103
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 370 e-102
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 362 e-100
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 360 2e-99
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 359 3e-99
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 357 1e-98
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 357 2e-98
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 2e-98
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 356 3e-98
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 356 3e-98
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 352 4e-97
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 7e-97
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 348 5e-96
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 1e-93
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 339 4e-93
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 333 2e-91
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 333 3e-91
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 1e-90
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 3e-90
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 3e-89
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 3e-88
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 6e-82
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 3e-81
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 298 9e-81
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 1e-80
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 2e-79
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 291 1e-78
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 6e-78
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 1e-77
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 282 4e-76
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 5e-75
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 4e-74
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 274 1e-73
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 3e-73
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 272 5e-73
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 272 5e-73
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 6e-73
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 7e-73
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 8e-73
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 271 8e-73
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 271 2e-72
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 3e-72
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 267 2e-71
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 267 2e-71
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 5e-71
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 9e-71
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 3e-70
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 261 9e-70
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 260 2e-69
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 4e-69
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 259 6e-69
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 256 3e-68
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 8e-68
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 1e-66
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 2e-66
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 7e-66
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 248 1e-65
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 8e-65
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 3e-64
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 242 6e-64
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 9e-64
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 3e-63
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 238 1e-62
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 2e-62
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 5e-62
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 8e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 9e-62
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 5e-61
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 232 5e-61
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 221 1e-57
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 5e-57
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 218 1e-56
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 9e-56
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 1e-55
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 1e-55
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 5e-55
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 6e-54
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 6e-53
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 9e-49
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 9e-49
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 2e-48
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 187 2e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 3e-47
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 5e-47
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 3e-35
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 119 6e-27
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 107 2e-23
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 3e-23
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 5e-22
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 101 2e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 2e-21
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 6e-21
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 6e-21
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 9e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 3e-20
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 94 2e-19
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 6e-19
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 92 9e-19
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 89 1e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 2e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 87 4e-17
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 5e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 2e-16
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 84 3e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 3e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 3e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 4e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 81 2e-15
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 7e-15
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 9e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 5e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 73 6e-13
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 69 8e-12
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 66 1e-10
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 65 1e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 63 8e-10
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 62 1e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 62 2e-09
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 2e-09
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 59 1e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 54 3e-07
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 54 3e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 9e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 52 9e-07
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 52 9e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 52 2e-06
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/593 (70%), Positives = 490/593 (82%), Gaps = 17/593 (2%)
Query: 78 LQQPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIV 137
LQ+ LL+MA+ G +M F GY+ALLN C+ KRALR+GQRVHAHMIKTRYLP+ +LRTRL++
Sbjct: 36 LQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLI 95
Query: 138 LYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT 197
Y KCD L DAR V DEMPE+NVVSWTAMIS YSQ G++S+AL +F +M+RS +PNEFT
Sbjct: 96 FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFT 155
Query: 198 FATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
FATV + LG+QIH LI+K NYD+H++VGSSLLDMYAK G+I EAR IFECLP
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 250 ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQ 309
ERDVVSCTAII+GYAQLGLDEEAL++F +L EGM NYVTYAS+LTALSGLA LDHGKQ
Sbjct: 216 ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQ 275
Query: 310 VHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE 369
H HVLR E+P Y VLQNSLIDMYSKCGNL+Y+RR+FD M ERT +SWNAMLVGY KHG
Sbjct: 276 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGL 335
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEH 429
GREVLELF LMR+E VKPD VT+LAVLSGCSHG +ED GL+IF M +G+ G +P EH
Sbjct: 336 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEH 395
Query: 430 YGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIE 489
YGC+VD+LGRAGR++EAFEFIK+MP +PTA + GSLLGAC VH +VDIG VG RL+EIE
Sbjct: 396 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIE 455
Query: 490 TGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSH 540
NAGNY LS DV ++R MM++KAV KEPGRS I+ +Q LH FHA+DR+H
Sbjct: 456 PENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTH 515
Query: 541 PRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPE 600
PRREEV K+KE+S++ K+AGYVPDLSCVL+DVDEEQKEK+LLGHSEKLAL+FGLI+T E
Sbjct: 516 PRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGE 575
Query: 601 GVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
G+PIRV KNLRICVDCHNFAK SK++ REVSLRDKNRFHQIV G CSCGDYW
Sbjct: 576 GIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 459 bits (1181), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/579 (41%), Positives = 349/579 (60%), Gaps = 28/579 (4%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
+ C S + G++ H Y +F+ + LIV+Y+ C L DAR VFDE+P+RN+
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF------ATVXSMLGR------- 207
VSWT+MI Y G A A++LF +L + ++ F +V S R
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 208 -QIHSLIIKSNYDAHVYVGSSLLDMYAK--DGKIHEARGIFECLPERDVVSCTAIISGYA 264
IHS +IK +D V VG++LLD YAK +G + AR IF+ + ++D VS +I+S YA
Sbjct: 203 ESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYA 262
Query: 265 QLGLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
Q G+ EA ++FR+L + + + N +T ++VL A+S +L GK +H+ V+R + V
Sbjct: 263 QSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDV 322
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
++ S+IDMY KCG + +R+ FD M+ + V SW AM+ GYG HG + LELF M +
Sbjct: 323 IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS 382
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRV 443
V+P+ +T ++VL+ CSH GL G F M G+ GVEP EHYGC+VDLLGRAG +
Sbjct: 383 G-VRPNYITFVSVLAACSHAGLHVEGWRWFNAM-KGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 444 EEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS--- 500
++A++ I++M +P + IW SLL AC +H NV++ RL E+++ N G Y LS
Sbjct: 441 QKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIY 500
Query: 501 ------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELS 554
DV +R +M + ++K PG S +EL+ +H F D HP+RE++Y + EL+
Sbjct: 501 ADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELN 560
Query: 555 VRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICV 614
+ EAGYV + S V HDVDEE+KE L HSEKLA++FG+++T G + V+KNLR+C
Sbjct: 561 RKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCS 620
Query: 615 DCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
DCHN K ISKI RE +RD RFH G CSCGDYW
Sbjct: 621 DCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 36/242 (14%)
Query: 248 LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG 307
+ + DV S ++I+ A+ G EAL F +R + ++ + A S L + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKH 367
KQ H S + + ++LI MYS CG L +R++FD + +R ++SW +M+ GY +
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 368 GEGREVLELFT-LMREENEVKP----DGVTMLAVLSGCSH---GGLE------------D 407
G + + LF L+ +EN+ D + +++V+S CS GL D
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 408 RG-------LDIFYDMTSGKIGVEPK---------KEHYGCVVDLLGRAGRVEEAFEFIK 451
RG LD + G + V K + Y ++ + ++G EAFE +
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 452 KM 453
++
Sbjct: 276 RL 277
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 448 bits (1152), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/573 (37%), Positives = 360/573 (62%), Gaps = 18/573 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +++ C + + LR +++H ++K +L +RT L+V Y+KC ++ DA +F E+
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIG 357
Query: 157 -ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG----RQIHS 211
NVVSWTAMIS + Q +A++LF +M R G PNEFT++ + + L ++H+
Sbjct: 358 CVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHA 417
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
++K+NY+ VG++LLD Y K GK+ EA +F + ++D+V+ +A+++GYAQ G E
Sbjct: 418 QVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEA 477
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGL-ASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
A+ +F +L G++ N T++S+L + AS+ GKQ H ++S + S + + ++L+
Sbjct: 478 AIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALL 537
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
MY+K GN+ + +F +E+ ++SWN+M+ GY +HG+ + L++F M++ +VK DG
Sbjct: 538 TMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKR-KVKMDG 596
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
VT + V + C+H GL + G + ++D+ + P KEH C+VDL RAG++E+A + I
Sbjct: 597 VTFIGVFAACTHAGLVEEG-EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVI 655
Query: 451 KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------X 501
+ MP + IW ++L AC VH ++G +++ ++ ++ Y LS
Sbjct: 656 ENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQ 715
Query: 502 DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAG 561
+ +R +M ++ V KEPG S IE+ ++F A DRSHP ++++Y+K+++LS R K+ G
Sbjct: 716 ERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775
Query: 562 YVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAK 621
Y PD S VL D+D+E KE +L HSE+LA++FGLI+TP+G P+ +IKNLR+C DCH K
Sbjct: 776 YEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIK 835
Query: 622 YISKIYGREVSLRDKNRFHQIVG-GKCSCGDYW 653
I+KI RE+ +RD NRFH G CSCGD+W
Sbjct: 836 LIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 169/296 (57%), Gaps = 10/296 (3%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G+++H IK +L V + T L+ Y K + +D R VFDEM ERNVV+WT +IS Y++
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYV 224
+ L LF++M GT+PN FTFA +L G Q+H++++K+ D + V
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPV 231
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGM 284
+SL+++Y K G + +AR +F+ + VV+ ++ISGYA GLD EAL +F +R +
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
+ + ++ASV+ + L L +Q+H V++ ++ +L+ YSKC + + R
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 345 IFDTMQ-ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG 399
+F + V+SW AM+ G+ ++ E ++LF+ M+ + V+P+ T +L+
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG-VRPNEFTYSVILTA 406
Score = 158 bits (400), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 153/266 (57%), Gaps = 9/266 (3%)
Query: 145 LRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS- 203
L +A ++FD+ P R+ S+ +++ +S+ G +A LF+ + R G E + F++V
Sbjct: 43 LYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKV 102
Query: 204 -------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSC 256
+ GRQ+H IK + V VG+SL+D Y K + R +F+ + ER+VV+
Sbjct: 103 SATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTW 162
Query: 257 TAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR 316
T +ISGYA+ +++E L LF +++ EG Q N T+A+ L L+ G QVH V++
Sbjct: 163 TTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVK 222
Query: 317 SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLEL 376
+ + + + NSLI++Y KCGN+ +R +FD + ++V++WN+M+ GY +G E L +
Sbjct: 223 NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGM 282
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSH 402
F MR N V+ + +V+ C++
Sbjct: 283 FYSMR-LNYVRLSESSFASVIKLCAN 307
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 10/253 (3%)
Query: 237 KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
+++ A +F+ P RD S +++ G+++ G +EA LF + GM+ + ++SVL
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 297 ALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS 356
+ L G+Q+H ++ V + SL+D Y K N R++FD M+ER V++
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 357 WNAMLVGYGKHGEGREVLELFTLMREENE-VKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
W ++ GY ++ EVL LF MR +NE +P+ T A L + G+ RGL +
Sbjct: 162 WTTLISGYARNSMNDEVLTLF--MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTV 219
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNV 475
+ K G++ +++L + G V +A K + + W S++ + + +
Sbjct: 220 VV--KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAAN-GL 275
Query: 476 D---IGVFVGHRL 485
D +G+F RL
Sbjct: 276 DLEALGMFYSMRL 288
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 447 bits (1150), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/587 (40%), Positives = 349/587 (59%), Gaps = 22/587 (3%)
Query: 86 ALCGHDMK--FKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
++C ++K F ++L + R + G+ +H + +++ + V + T L+ +Y KC
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCG 285
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
SL AR +FD M ERNVVSW +MI AY Q +A+ +F +ML G +P + +
Sbjct: 286 SLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH 345
Query: 204 ML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS 255
GR IH L ++ D +V V +SL+ MY K ++ A +F L R +VS
Sbjct: 346 ACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVS 405
Query: 256 CTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
A+I G+AQ G +AL+ F Q+R ++ + TY SV+TA++ L+ H K +H V+
Sbjct: 406 WNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVM 465
Query: 316 RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLE 375
RS + V + +L+DMY+KCG + +R IFD M ER V +WNAM+ GYG HG G+ LE
Sbjct: 466 RSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALE 525
Query: 376 LFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVD 435
LF M ++ +KP+GVT L+V+S CSH GL + GL FY M +E +HYG +VD
Sbjct: 526 LFEEM-QKGTIKPNGVTFLSVISACSHSGLVEAGLKCFY-MMKENYSIELSMDHYGAMVD 583
Query: 436 LLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGN 495
LLGRAGR+ EA++FI +MP +P ++G++LGAC +H NV+ RL E+ + G
Sbjct: 584 LLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGY 643
Query: 496 YFFLSXDVRS---------LRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEV 546
+ L+ R+ +R ML++ + K PG S +E+ +H+F + +HP +++
Sbjct: 644 HVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKI 703
Query: 547 YIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRV 606
Y +++L KEAGYVPD + VL V+ + KE++L HSEKLA+SFGL++T G I V
Sbjct: 704 YAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHV 762
Query: 607 IKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
KNLR+C DCHN KYIS + GRE+ +RD RFH G CSCGDYW
Sbjct: 763 RKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/428 (29%), Positives = 212/428 (49%), Gaps = 51/428 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ LL C + LR G+ +H ++K+ + +F T L +Y KC + +AR VFD MP
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
ER++VSW +++ YSQ G A AL + M +P+ T +V +G++
Sbjct: 198 ERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE 257
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH ++S +D+ V + ++L+DMYAK G + AR +F+ + ER+VVS ++I Y Q
Sbjct: 258 IHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNEN 317
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+EA+ +F+++ EG++ V+ L A + L L+ G+ +H + + V + NS
Sbjct: 318 PKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNS 377
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
LI MY KC + + +F +Q RT++SWNAM++G+ ++G + L F+ MR VKP
Sbjct: 378 LISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRT-VKP 436
Query: 389 DGVTMLAVLSGCS-----------HGGLEDRGLD-----------------------IFY 414
D T ++V++ + HG + LD + +
Sbjct: 437 DTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIF 496
Query: 415 DMTSGKIGVEPKKEHYGCVVDLLGRAG---RVEEAFEFIKKMPFEPTAAIWGSLLGACSV 471
DM S E + ++D G G E FE ++K +P + S++ ACS
Sbjct: 497 DMMS-----ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSH 551
Query: 472 HSNVDIGV 479
V+ G+
Sbjct: 552 SGLVEAGL 559
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/375 (29%), Positives = 204/375 (54%), Gaps = 15/375 (4%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
LL C S + LR+ + + K F +T+L+ L+ + S+ +A VF+ + +
Sbjct: 43 LLERCSSLKELRQ---ILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKL 99
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHS 211
V + M+ +++ +AL FV+M EP + F + + +G++IH
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHG 159
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
L++KS + ++ + L +MYAK +++EAR +F+ +PERD+VS I++GY+Q G+
Sbjct: 160 LLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARM 219
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL++ + + E ++ +++T SVL A+S L + GK++H + +RS S V + +L+D
Sbjct: 220 ALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVD 279
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
MY+KCG+L +R++FD M ER V+SWN+M+ Y ++ +E + +F M +E VKP V
Sbjct: 280 MYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG-VKPTDV 338
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
+++ L C+ G +RG F S ++G++ ++ + + V+ A
Sbjct: 339 SVMGALHACADLGDLERGR--FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 452 KMPFEPTAAIWGSLL 466
K+ T W +++
Sbjct: 397 KLQ-SRTLVSWNAMI 410
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 443 bits (1140), Expect = e-124, Method: Compositional matrix adjust.
Identities = 226/569 (39%), Positives = 350/569 (61%), Gaps = 22/569 (3%)
Query: 91 DMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARH 150
D +F YN LL +C + L +G+ VHAH++++ + + + L+ +Y KC SL +AR
Sbjct: 59 DRRF--YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 151 VFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML----- 205
VF++MP+R+ V+WT +IS YSQ AL F QMLR G PNEFT ++V
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 206 ---GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 262
G Q+H +K +D++V+VGS+LLD+Y + G + +A+ +F+ L R+ VS A+I+G
Sbjct: 177 GCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAG 236
Query: 263 YAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY 322
+A+ E+AL+LF+ + +G + ++ +YAS+ A S L+ GK VH ++++S
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
N+L+DMY+K G++ +R+IFD + +R V+SWN++L Y +HG G+E + F MR
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRR 356
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR 442
++P+ ++ L+VL+ CSH GL D G +Y++ K G+ P+ HY VVDLLGRAG
Sbjct: 357 VG-IRPNEISFLSVLTACSHSGLLDEGWH-YYELMK-KDGIVPEAWHYVTVVDLLGRAGD 413
Query: 443 VEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFL--- 499
+ A FI++MP EPTAAIW +LL AC +H N ++G + + E++ + G + L
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 500 ------SXDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKEL 553
D +R M + V KEP S +E++ +H F A+D HP+REE+ K +E+
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEV 533
Query: 554 SVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRIC 613
+ KE GYVPD S V+ VD++++E L HSEK+AL+F L++TP G I + KN+R+C
Sbjct: 534 LAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVC 593
Query: 614 VDCHNFAKYISKIYGREVSLRDKNRFHQI 642
DCH K SK+ GRE+ +RD NRFH
Sbjct: 594 GDCHTAIKLASKVVGREIIVRDTNRFHHF 622
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 39/238 (16%)
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
L G + ++ Y ++L + L G+ VH H+L+S +V+ N+L++MY+KCG+
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLS 398
L +R++F+ M +R ++W ++ GY +H + L F M P+ T+ +V+
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFG-YSPNEFTLSSVIK 169
Query: 399 -------GCS----HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVD------------ 435
GC HG G D + S + + + YG + D
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTR---YGLMDDAQLVFDALESRN 226
Query: 436 -------LLGRAGR--VEEAFEFIKKM---PFEPTAAIWGSLLGACSVHSNVDIGVFV 481
+ G A R E+A E + M F P+ + SL GACS ++ G +V
Sbjct: 227 DVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWV 284
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 436 bits (1121), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/580 (38%), Positives = 352/580 (60%), Gaps = 25/580 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y L+ C + +L + RVH H++ FL T+LI +Y+ S+ AR VFD+
Sbjct: 80 YELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTR 139
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS------------M 204
+R + W A+ A + G+ + L L+ +M R G E + FT+ V M
Sbjct: 140 KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLM 199
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYA 264
G++IH+ + + Y +HVY+ ++L+DMYA+ G + A +F +P R+VVS +A+I+ YA
Sbjct: 200 KGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYA 259
Query: 265 QLGLDEEALDLFRQLRGEGMQS--NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY 322
+ G EAL FR++ E S N VT SVL A + LA+L+ GK +H ++LR + S
Sbjct: 260 KNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSI 319
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
+ + ++L+ MY +CG L +R+FD M +R V+SWN+++ YG HG G++ +++F M
Sbjct: 320 LPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA 379
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR 442
N P VT ++VL CSH GL + G +F M G++P+ EHY C+VDLLGRA R
Sbjct: 380 -NGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDH-GIKPQIEHYACMVDLLGRANR 437
Query: 443 VEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX- 501
++EA + ++ M EP +WGSLLG+C +H NV++ RL +E NAGNY L+
Sbjct: 438 LDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADI 497
Query: 502 --------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKEL 553
+V+ ++ ++ + + K PGR +E+ + +++F + D +P E+++ + +L
Sbjct: 498 YAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKL 557
Query: 554 SVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRIC 613
+ KE GY+P VL++++ E+KE+I+LGHSEKLAL+FGLI+T +G PIR+ KNLR+C
Sbjct: 558 AEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLC 617
Query: 614 VDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
DCH F K+ISK +E+ +RD NRFH+ G CSCGDYW
Sbjct: 618 EDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 5/147 (3%)
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
+S +I + G ++A+ + Q Q TY ++ +SL +VH H
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQ----TYELLILCCGHRSSLSDALRVHRH 102
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREV 373
+L + L LI MYS G++ Y+R++FD ++RT+ WNA+ G G EV
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGC 400
L L+ M V+ D T VL C
Sbjct: 163 LGLYWKMNRIG-VESDRFTYTYVLKAC 188
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 434 bits (1117), Expect = e-122, Method: Compositional matrix adjust.
Identities = 230/570 (40%), Positives = 336/570 (58%), Gaps = 23/570 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+N LL V K+ + E ++ M + V +I Y + + +AR +FDE P
Sbjct: 222 WNCLLGGFVKKKKIVEARQFFDSM----NVRDVVSWNTIITGYAQSGKIDEARQLFDESP 277
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKS 216
++V +WTAM+S Y Q +A LF +M E NE ++ + + + + K
Sbjct: 278 VQDVFTWTAMVSGYIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKE 333
Query: 217 NYDA----HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEA 272
+D +V ++++ YA+ GKI EA+ +F+ +P+RD VS A+I+GY+Q G EA
Sbjct: 334 LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEA 393
Query: 273 LDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDM 332
L LF Q+ EG + N +++S L+ + + +L+ GKQ+H +++ + + N+L+ M
Sbjct: 394 LRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLM 453
Query: 333 YSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVT 392
Y KCG++ + +F M + ++SWN M+ GY +HG G L F M+ E +KPD T
Sbjct: 454 YCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREG-LKPDDAT 512
Query: 393 MLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKK 452
M+AVLS CSH GL D+G FY MT GV P +HY C+VDLLGRAG +E+A +K
Sbjct: 513 MVAVLSACSHTGLVDKGRQYFYTMTQ-DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKN 571
Query: 453 MPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DV 503
MPFEP AAIWG+LLGA VH N ++ ++ +E N+G Y LS DV
Sbjct: 572 MPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDV 631
Query: 504 RSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYV 563
LR M K V K PG S IE+ HTF D HP ++E++ ++EL +R K+AGYV
Sbjct: 632 GKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYV 691
Query: 564 PDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYI 623
S VLHDV+EE+KE+++ HSE+LA+++G++ G PIRVIKNLR+C DCHN KY+
Sbjct: 692 SKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYM 751
Query: 624 SKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
++I GR + LRD NRFH G CSCGDYW
Sbjct: 752 ARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 168/346 (48%), Gaps = 36/346 (10%)
Query: 139 YTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF 198
Y + + DAR VFD MPE+N VSW A++SAY Q +A LF +
Sbjct: 167 YAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF-------KSRENWAL 219
Query: 199 ATVXSMLGRQIHSLII---KSNYDA----HVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
+ +LG + I + +D+ V ++++ YA+ GKI EAR +F+ P +
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQ 279
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVH 311
DV + TA++SGY Q + EEA +LF ++ + N V++ ++L ++ K++
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELF 335
Query: 312 NHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGR 371
+ + V ++ N++I Y++CG ++ ++ +FD M +R +SW AM+ GY + G
Sbjct: 336 DVMPCRNVSTW----NTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSF 391
Query: 372 EVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG 431
E L LF M E + + + + LS C+ + G + + G G E G
Sbjct: 392 EALRLFVQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKG--GYET-----G 443
Query: 432 CVVD-----LLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
C V + + G +EEA + K+M + + W +++ S H
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS-WNTMIAGYSRH 488
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 147/333 (44%), Gaps = 55/333 (16%)
Query: 136 IVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNE 195
I Y + +A VF MP + VS+ MIS Y + G A LF +M P
Sbjct: 71 ISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM------PE- 123
Query: 196 FTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS 255
R + S + ++ Y ++ + +AR +FE +PERDV S
Sbjct: 124 -----------RDLVSWNV-------------MIKGYVRNRNLGKARELFEIMPERDVCS 159
Query: 256 CTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
++SGYAQ G ++A +F ++ + N V++ ++L+A + ++ +
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACM----LF 211
Query: 316 RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLE 375
+S +V N L+ + K + +R+ FD+M R V+SWN ++ GY + G+ E +
Sbjct: 212 KSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 376 LFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVD 435
LF +E+ V+ D T A++SG + + ++F M P++
Sbjct: 272 LF----DESPVQ-DVFTWTAMVSGYIQNRMVEEARELFDKM--------PERNEVSWNAM 318
Query: 436 LLG--RAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
L G + R+E A E MP + W +++
Sbjct: 319 LAGYVQGERMEMAKELFDVMPCR-NVSTWNTMI 350
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 87/180 (48%), Gaps = 15/180 (8%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
+QM G + +++ L+ C AL G+++H ++K Y F+ L+++Y K
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
C S+ +A +F EM +++VSW MI+ YS+ G+ AL F M R G +P++ T V
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 202 XSML--------GRQIHSLIIKSNYDAHVYVGSS----LLDMYAKDGKIHEARGIFECLP 249
S GRQ + + D V S ++D+ + G + +A + + +P
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQ---DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMP 573
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 240 EARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS 299
+ + + +C + D+ IS Y + G EAL +F+++ + + V+Y +++
Sbjct: 52 QTKPLLKC-GDSDIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYL 106
Query: 300 GLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNA 359
+ +++ + + ++ S+ N +I Y + NL +R +F+ M ER V SWN
Sbjct: 107 RNGEFELARKLFDEMPERDLVSW----NVMIKGYVRNRNLGKARELFEIMPERDVCSWNT 162
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
ML GY ++G + +F M E+N+V + +
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNAL 194
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Length = 1064
Score = 434 bits (1116), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/574 (39%), Positives = 342/574 (59%), Gaps = 19/574 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y ++L C+ L G+++H+ +IKT + + ++ + LI +Y K L A +
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
++VVSWT MI+ Y+Q + +AL F QML G +E S G+Q
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQ 612
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH+ S + + + ++L+ +Y++ GKI E+ FE D ++ A++SG+ Q G
Sbjct: 613 IHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGN 672
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+EEAL +F ++ EG+ +N T+ S + A S A++ GKQVH + ++ S + N+
Sbjct: 673 NEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNA 732
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
LI MY+KCG+++ + + F + + +SWNA++ Y KHG G E L+ F M N V+P
Sbjct: 733 LISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN-VRP 791
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
+ VT++ VLS CSH GL D+G+ F M S + G+ PK EHY CVVD+L RAG + A E
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNS-EYGLSPKPEHYVCVVDMLTRAGLLSRAKE 850
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------- 501
FI++MP +P A +W +LL AC VH N++IG F H LLE+E ++ Y LS
Sbjct: 851 FIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKK 910
Query: 502 -DVRSL-RDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
D R L R M +K V KEPG+S IE+ +H+F+ D++HP +E++ ++L+ R E
Sbjct: 911 WDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASE 970
Query: 560 AGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNF 619
GYV D +L+++ EQK+ I+ HSEKLA+SFGL+S P VPI V+KNLR+C DCH +
Sbjct: 971 IGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAW 1030
Query: 620 AKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
K++SK+ RE+ +RD RFH GG CSC DYW
Sbjct: 1031 IKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 108/379 (28%), Positives = 188/379 (49%), Gaps = 14/379 (3%)
Query: 100 LLNECV-SKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
LL C+ + +L EG+++H+ ++K + L +L Y L A VFDEMPER
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPER 149
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM---------LGRQI 209
+ +W MI + R + LFV+M+ PNE TF+ V + QI
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H+ I+ V + L+D+Y+++G + AR +F+ L +D S A+ISG ++ +
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
EA+ LF + G+ ++SVL+A + SL+ G+Q+H VL+ S + N+L
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
+ +Y GNL + IF M +R +++N ++ G + G G + +ELF M + ++PD
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPD 388
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF 449
T+ +++ CS G RG + T K+G + G +++L + +E A ++
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTT--KLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 450 IKKMPFEPTAAIWGSLLGA 468
+ E +W +L A
Sbjct: 447 FLETEVE-NVVLWNVMLVA 464
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 196/384 (51%), Gaps = 16/384 (4%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+++HA ++ S + LI LY++ + AR VFD + ++ SW AMIS S+
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVG 225
++A+ LF M G P + F++V S +G Q+H L++K + + YV
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ 285
++L+ +Y G + A IF + +RD V+ +I+G +Q G E+A++LF+++ +G++
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRI 345
+ T AS++ A S +L G+Q+H + + S ++ +L+++Y+KC ++ +
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 346 FDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
F + V+ WN MLV YG + R +F M+ E E+ P+ T ++L C G
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLG- 504
Query: 406 EDRGLDIFYDMTSGKIGVEPKKEHYGC--VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWG 463
L++ + S I + Y C ++D+ + G+++ A++ + + + + W
Sbjct: 505 ---DLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVS-WT 560
Query: 464 SLLGACSVHSNVDIGVFVGHRLLE 487
+++ + ++ D + ++L+
Sbjct: 561 TMIAGYTQYNFDDKALTTFRQMLD 584
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 177/385 (45%), Gaps = 20/385 (5%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
++++L+ C +L G+++H ++K + ++ L+ LY +L A H+F M
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GR 207
+R+ V++ +I+ SQ GY +A+ LF +M G EP+ T A++ G+
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ 409
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
Q+H+ K + ++ + +LL++YAK I A F +VV ++ Y L
Sbjct: 410 QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD 469
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
+ +FRQ++ E + N TY S+L L L+ G+Q+H+ ++++ + +
Sbjct: 470 DLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCS 529
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
LIDMY+K G L + I + V+SW M+ GY ++ + L F M + ++
Sbjct: 530 VLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRG-IR 588
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
D V + +S C+ G I G +V L R G++EE++
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVS--GFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 448 EFIKKMPFEPTAA----IWGSLLGA 468
+ FE T A W +L+
Sbjct: 647 -----LAFEQTEAGDNIAWNALVSG 666
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 146/279 (52%), Gaps = 16/279 (5%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
G ++ C +AL+EGQ++HA + + + + L+ LY++C + ++ F++
Sbjct: 593 GLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQT 652
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA--------TVXSMLGR 207
+ ++W A++S + Q G +AL +FV+M R G + N FTF T G+
Sbjct: 653 EAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 712
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
Q+H++I K+ YD+ V ++L+ MYAK G I +A F + ++ VS AII+ Y++ G
Sbjct: 713 QVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHG 772
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG----KQVHNHVLRSEVPSYV 323
EALD F Q+ ++ N+VT VL+A S + +D G + +++ S P +
Sbjct: 773 FGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHY 832
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQER-TVMSWNAML 361
V ++DM ++ G L+ ++ M + + W +L
Sbjct: 833 V---CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLL 868
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/571 (39%), Positives = 343/571 (60%), Gaps = 18/571 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y+ L+ C+S RA+ EG + H+ + P +FL LI +Y K + L DA +FD+MP
Sbjct: 64 YSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP 123
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG-----RQIHS 211
+RNV+SWT MISAYS+ +AL L V MLR PN +T+++V R +H
Sbjct: 124 QRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHC 183
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
IIK ++ V+V S+L+D++AK G+ +A +F+ + D + +II G+AQ +
Sbjct: 184 GIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDV 243
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL+LF++++ G + T SVL A +GLA L+ G Q H H+++ + ++L N+L+D
Sbjct: 244 ALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQD--LILNNALVD 301
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
MY KCG+L + R+F+ M+ER V++W+ M+ G ++G +E L+LF M+ KP+ +
Sbjct: 302 MYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSG-TKPNYI 360
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
T++ VL CSH GL + G F M G++P +EHYGC++DLLG+AG++++A + +
Sbjct: 361 TIVGVLFACSHAGLLEDGWYYFRSMKK-LYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419
Query: 452 KMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------D 502
+M EP A W +LLGAC V N+ + + +++ ++ +AG Y LS
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Query: 503 VRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGY 562
V +R M + + KEPG S IE+++ +H F D SHP+ EV K+ +L R GY
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539
Query: 563 VPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKY 622
VP+ + VL D++ EQ E L HSEKLAL+FGL++ P IR+ KNLRIC DCH F K
Sbjct: 540 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599
Query: 623 ISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
SK+ R + +RD R+H GKCSCGDYW
Sbjct: 600 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 110/234 (47%), Gaps = 14/234 (5%)
Query: 257 TAIISGYAQLGLDEE---ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
T ++S + +L + A+ L+ G+ ++ TY+ ++ ++ G + H
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREV 373
+ + + L N LI+MY K L + ++FD M +R V+SW M+ Y K ++
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI--GVEPKKEHYG 431
LEL LM +N V+P+ T +VL C+ G+ D + + G I G+E
Sbjct: 147 LELLVLMLRDN-VRPNVYTYSSVLRSCN--GMSDVRM-----LHCGIIKEGLESDVFVRS 198
Query: 432 CVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRL 485
++D+ + G E+A +M A +W S++G + +S D+ + + R+
Sbjct: 199 ALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 432 bits (1110), Expect = e-121, Method: Compositional matrix adjust.
Identities = 227/590 (38%), Positives = 346/590 (58%), Gaps = 20/590 (3%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L+M GH ++ +L V GQ++HA + T + + +++ Y+K
Sbjct: 238 FLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK 297
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
D + + R +FDEMPE + VS+ +IS+YSQ +L+ F +M G + F FAT+
Sbjct: 298 HDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATM 357
Query: 202 XSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
S+ +GRQ+H + + D+ ++VG+SL+DMYAK EA IF+ LP+R
Sbjct: 358 LSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
VS TA+ISGY Q GL L LF ++RG ++++ T+A+VL A + ASL GKQ+H
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREV 373
++RS V + L+DMY+KCG++ + ++F+ M +R +SWNA++ + +G+G
Sbjct: 478 IIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAA 537
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCV 433
+ F M E ++PD V++L VL+ CSH G ++G + F M S G+ PKK+HY C+
Sbjct: 538 IGAFAKMIESG-LQPDSVSILGVLTACSHCGFVEQGTEYFQAM-SPIYGITPKKKHYACM 595
Query: 434 VDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIET-GN 492
+DLLGR GR EA + + +MPFEP +W S+L AC +H N + +L +E +
Sbjct: 596 LDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRD 655
Query: 493 AGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRR 543
A Y +S VR ++ M ++ + K P S +E++ +H F ++D++HP
Sbjct: 656 AAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNG 715
Query: 544 EEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVP 603
+E+ K+ EL+ + GY PD S V+ DVDE+ K + L HSE+LA++F LISTPEG P
Sbjct: 716 DEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCP 775
Query: 604 IRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
I V+KNLR C DCH K ISKI RE+++RD +RFH G CSCGDYW
Sbjct: 776 IVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 220/405 (54%), Gaps = 29/405 (7%)
Query: 102 NECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD--SLRDARHVFDEMPERN 159
N+ V + A+ GQ VHA +K + + FL ++L + C+ L A +F+E+PE++
Sbjct: 158 NDAVPQNAV--GQ-VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHS 211
V++ +I+ Y + G +++++LF++M +SG +P++FTF+ V LG+Q+H+
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
L + + + VG+ +LD Y+K ++ E R +F+ +PE D VS +IS Y+Q E
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
+L FR+++ G +A++L+ + L+SL G+Q+H L + S + + NSL+D
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGY---GKHGEGREVLELFTLMREENEVKP 388
MY+KC + IF ++ +RT +SW A++ GY G HG G L+LFT MR N ++
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG---LKLFTKMRGSN-LRA 450
Query: 389 DGVTMLAVLSGCSHGG--LEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
D T VL + L + L F + SG + E G +VD+ + G +++A
Sbjct: 451 DQSTFATVLKASASFASLLLGKQLHAFI-IRSGNL--ENVFSGSG-LVDMYAKCGSIKDA 506
Query: 447 FEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETG 491
+ ++MP + A W +L+ A + N D +G IE+G
Sbjct: 507 VQVFEEMP-DRNAVSWNALISAHA--DNGDGEAAIGAFAKMIESG 548
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 136/260 (52%), Gaps = 14/260 (5%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG--TE 192
+I + K + AR +FD MP+R VV+WT ++ Y++ + +A LF QM RS T
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 193 PNEFTFATV---------XSMLGRQIHSLIIKSNYDAHVY--VGSSLLDMYAKDGKIHEA 241
P+ TF T+ + +G Q+H+ +K +D + + V + LL Y + ++ A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVG-QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 242 RGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL 301
+FE +PE+D V+ +I+GY + GL E++ LF ++R G Q + T++ VL A+ GL
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 302 ASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAML 361
G+Q+H + + + N ++D YSK + +R +FD M E +S+N ++
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 362 VGYGKHGEGREVLELFTLMR 381
Y + + L F M+
Sbjct: 324 SSYSQADQYEASLHFFREMQ 343
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 104/233 (44%), Gaps = 7/233 (3%)
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL--RGEG 283
++++ + K G + AR +F+ +P+R VV+ T ++ YA+ +EA LFRQ+
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 284 MQSNYVTYASVLTALSGLASLDHGKQVHNHVLR--SEVPSYVVLQNSLIDMYSKCGNLTY 341
++VT+ ++L + + QVH ++ + ++ + N L+ Y + L
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ +F+ + E+ +++N ++ GY K G E + LF MR+ +P T VL
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVV 261
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP 454
GL D L S G ++D + RV E +MP
Sbjct: 262 --GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMP 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLM-R 381
V N++I + K G+++ +R +FD M +RTV++W ++ Y ++ E +LF M R
Sbjct: 79 TVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCR 138
Query: 382 EENEVKPDGVTMLAVLSGCS 401
+ PD VT +L GC+
Sbjct: 139 SSSCTLPDHVTFTTLLPGCN 158
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 431 bits (1108), Expect = e-121, Method: Compositional matrix adjust.
Identities = 219/573 (38%), Positives = 342/573 (59%), Gaps = 22/573 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFD--EMPE 157
LL C L+ G+ VHA + + + VF++ LI LY KC L AR VF+ +PE
Sbjct: 125 LLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPE 184
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQI 209
R +VSWTA++SAY+Q G +AL +F QM + +P+ +V + GR I
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H+ ++K + + SL MYAK G++ A+ +F+ + +++ A+ISGYA+ G
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYA 304
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
EA+D+F ++ + ++ + ++ S ++A + + SL+ + ++ +V RS+ V + ++L
Sbjct: 305 REAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSAL 364
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
IDM++KCG++ +R +FD +R V+ W+AM+VGYG HG RE + L+ M E V P+
Sbjct: 365 IDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAM-ERGGVHPN 423
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF 449
VT L +L C+H G+ G F M KI P+++HY CV+DLLGRAG +++A+E
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMADHKI--NPQQQHYACVIDLLGRAGHLDQAYEV 481
Query: 450 IKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX-------- 501
IK MP +P +WG+LL AC H +V++G + +L I+ N G+Y LS
Sbjct: 482 IKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLW 541
Query: 502 -DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEA 560
V +R M +K + K+ G S +E+ L F D+SHPR EE+ +V+ + R KE
Sbjct: 542 DRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEG 601
Query: 561 GYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFA 620
G+V + LHD+++E+ E+ L HSE++A+++GLISTP+G P+R+ KNLR CV+CH
Sbjct: 602 GFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAAT 661
Query: 621 KYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
K ISK+ RE+ +RD NRFH G CSCGDYW
Sbjct: 662 KLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 207/405 (51%), Gaps = 19/405 (4%)
Query: 78 LQQPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIV 137
L PLL H F Y +L++ K L++ +HA ++ S FL T+LI
Sbjct: 7 LASPLLYTNSGIHSDSF--YASLIDSATHKAQLKQ---IHARLLVLGLQFSGFLITKLIH 61
Query: 138 LYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT 197
+ + AR VFD++P + W A+I YS+ + AL ++ M + P+ FT
Sbjct: 62 ASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFT 121
Query: 198 FATVXS--------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFEC-- 247
F + +GR +H+ + + +DA V+V + L+ +YAK ++ AR +FE
Sbjct: 122 FPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLP 181
Query: 248 LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG 307
LPER +VS TAI+S YAQ G EAL++F Q+R ++ ++V SVL A + L L G
Sbjct: 182 LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQG 241
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKH 367
+ +H V++ + L SL MY+KCG + ++ +FD M+ ++ WNAM+ GY K+
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 368 GEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKK 427
G RE +++F M + +V+PD +++ + +S C+ G ++ ++ + G+
Sbjct: 302 GYAREAIDMFHEMINK-DVRPDTISITSAISACAQVGSLEQARSMYEYV--GRSDYRDDV 358
Query: 428 EHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
++D+ + G VE A + + +W +++ +H
Sbjct: 359 FISSALIDMFAKCGSVEGA-RLVFDRTLDRDVVVWSAMIVGYGLH 402
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 139/278 (50%), Gaps = 9/278 (3%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++LN + L++G+ +HA ++K L L +Y KC + A+ +FD+M
Sbjct: 227 SVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP 286
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIH 210
N++ W AMIS Y++ GYA +A+++F +M+ P+ + + S R ++
Sbjct: 287 NLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMY 346
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
+ +S+Y V++ S+L+DM+AK G + AR +F+ +RDVV +A+I GY G
Sbjct: 347 EYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAR 406
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
EA+ L+R + G+ N VT+ +L A + + G N + ++ +I
Sbjct: 407 EAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVI 466
Query: 331 DMYSKCGNLTYSRRIFDTMQ-ERTVMSWNAMLVGYGKH 367
D+ + G+L + + M + V W A+L KH
Sbjct: 467 DLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKH 504
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 430 bits (1106), Expect = e-120, Method: Compositional matrix adjust.
Identities = 244/637 (38%), Positives = 354/637 (55%), Gaps = 85/637 (13%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFD------ 153
+L + R + G++VH+ ++K +V + L+ +Y KC A+ VFD
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 154 -------------------------EMPERNVVSWTAMISAYSQRGYASQALNLFVQMLR 188
+M ER++V+W +MIS ++QRGY +AL++F +MLR
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 189 -SGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYA------ 233
S P+ FT A+V S +G+QIHS I+ + +D V ++L+ MY+
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 234 ---------------------------KDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
K G +++A+ IF L +RDVV+ TA+I GY Q
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G EA++LFR + G G + N T A++L+ S LASL HGKQ+H ++S V +
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
N+LI MY+K GN+T + R FD ++ ER +SW +M++ +HG E LELF M E
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG- 510
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
++PD +T + V S C+H GL ++G ++DM + P HY C+VDL GRAG ++E
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQ-YFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQE 569
Query: 446 AFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---- 501
A EFI+KMP EP WGSLL AC VH N+D+G RLL +E N+G Y L+
Sbjct: 570 AQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSA 629
Query: 502 -----DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVR 556
+ +R M V KE G S IE+ +H F D +HP + E+Y+ +K++
Sbjct: 630 CGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDE 689
Query: 557 FKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDC 616
K+ GYVPD + VLHD++EE KE+IL HSEKLA++FGLISTP+ +R++KNLR+C DC
Sbjct: 690 IKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDC 749
Query: 617 HNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
H K+ISK+ GRE+ +RD RFH G CSC DYW
Sbjct: 750 HTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 210/482 (43%), Gaps = 108/482 (22%)
Query: 100 LLNECVSKRALR-EGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP-- 156
LL + V+K R Q VH +IK+ + SV+L L+ +Y+K AR +FDEMP
Sbjct: 19 LLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLR 78
Query: 157 -----------------------------ERNVVSWTAMISAYSQRGYASQALNLFVQML 187
+R+ VSWT MI Y G +A+ + M+
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 188 RSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAK----- 234
+ G EP +FT V + + G+++HS I+K +V V +SLL+MYAK
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPM 198
Query: 235 --------------------------DGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
G++ A FE + ERD+V+ ++ISG+ Q G
Sbjct: 199 MAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGY 258
Query: 269 DEEALDLF-RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
D ALD+F + LR + + T ASVL+A + L L GKQ+H+H++ + ++ N
Sbjct: 259 DLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLN 318
Query: 328 SLIDMYSKCGNLTYSRR---------------------------------IFDTMQERTV 354
+LI MYS+CG + +RR IF ++++R V
Sbjct: 319 ALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDV 378
Query: 355 MSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFY 414
++W AM+VGY +HG E + LF M + +P+ T+ A+LS S G I
Sbjct: 379 VAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 415 DMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSN 474
++ K G ++ + +AG + A + E W S++ A + H +
Sbjct: 438 --SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGH 495
Query: 475 VD 476
+
Sbjct: 496 AE 497
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 12/189 (6%)
Query: 310 VHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE 369
VH V++S + V L N+L+++YSK G ++R++FD M RT SWN +L Y K G+
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEH 429
E F + + D V+ ++ G + G + + + DM K G+EP +
Sbjct: 96 MDSTCEFFDQLPQR-----DSVSWTTMIVGYKNIGQYHKAIRVMGDMV--KEGIEPTQFT 148
Query: 430 YGCVVDLLGRAGRVE---EAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLL 486
V+ + +E + FI K+ ++ SLL + + + FV R++
Sbjct: 149 LTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMV 208
Query: 487 --EIETGNA 493
+I + NA
Sbjct: 209 VRDISSWNA 217
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 429 bits (1102), Expect = e-120, Method: Compositional matrix adjust.
Identities = 217/522 (41%), Positives = 321/522 (61%), Gaps = 19/522 (3%)
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--- 205
R VF+ MP ++VVS+ +I+ Y+Q G AL + +M + +P+ FT ++V +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 206 -----GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
G++IH +I+ D+ VY+GSSL+DMYAK +I ++ +F L RD +S +++
Sbjct: 256 VDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLV 315
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP 320
+GY Q G EAL LFRQ+ ++ V ++SV+ A + LA+L GKQ+H +VLR
Sbjct: 316 AGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFG 375
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLM 380
S + + ++L+DMYSKCGN+ +R+IFD M +SW A+++G+ HG G E + LF M
Sbjct: 376 SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEM 435
Query: 381 REENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRA 440
+ + VKP+ V +AVL+ CSH GL D F MT G+ + EHY V DLLGRA
Sbjct: 436 KRQG-VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK-VYGLNQELEHYAAVADLLGRA 493
Query: 441 GRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS 500
G++EEA+ FI KM EPT ++W +LL +CSVH N+++ V ++ +++ N G Y +
Sbjct: 494 GKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMC 553
Query: 501 ---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVK 551
++ LR M KK + K+P S IE+ H F + DRSHP +++ +K
Sbjct: 554 NMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLK 613
Query: 552 ELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLR 611
+ + ++ GYV D S VLHDVDEE K ++L GHSE+LA++FG+I+T G IRV KN+R
Sbjct: 614 AVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIR 673
Query: 612 ICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
IC DCH K+ISKI RE+ +RD +RFH G CSCGDYW
Sbjct: 674 ICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 164/335 (48%), Gaps = 46/335 (13%)
Query: 112 EGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYS 171
+ +++HA I+T+ L +I +YT L +A +F + V++W ++I ++
Sbjct: 23 QAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 172 QRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVY 223
+ S+AL FV+M SG P+ F +V G +H I++ D +Y
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 224 VGSSLLDMYAK---------------------------DGK---------IHEARGIFEC 247
G++L++MYAK D K I R +FE
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 248 LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG 307
+P +DVVS II+GYAQ G+ E+AL + R++ ++ + T +SVL S + G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKH 367
K++H +V+R + S V + +SL+DMY+K + S R+F + R +SWN+++ GY ++
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQN 321
Query: 368 GEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH 402
G E L LF M +VKP V +V+ C+H
Sbjct: 322 GRYNEALRLFRQMVTA-KVKPGAVAFSSVIPACAH 355
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 140/264 (53%), Gaps = 18/264 (6%)
Query: 112 EGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYS 171
+G+ +H ++I+ V++ + L+ +Y K + D+ VF + R+ +SW ++++ Y
Sbjct: 260 KGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYV 319
Query: 172 QRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVY 223
Q G ++AL LF QM+ + +P F++V LG+Q+H +++ + ++++
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 224 VGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG 283
+ S+L+DMY+K G I AR IF+ + D VS TAII G+A G EA+ LF +++ +G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 284 MQSNYVTYASVLTALSGLASLDHGKQVHNHV-----LRSEVPSYVVLQNSLIDMYSKCGN 338
++ N V + +VLTA S + +D N + L E+ Y ++ D+ + G
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA----AVADLLGRAGK 495
Query: 339 LTYSRRIFDTM-QERTVMSWNAML 361
L + M E T W+ +L
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLL 519
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 67/108 (62%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
+++++ C L G+++H ++++ + ++F+ + L+ +Y+KC +++ AR +FD M
Sbjct: 345 AFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
+ VSWTA+I ++ G+ +A++LF +M R G +PN+ F V +
Sbjct: 405 NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLT 452
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/571 (39%), Positives = 342/571 (59%), Gaps = 19/571 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L C A+ E + H +I+ V L LI Y+KC + AR VFD M ER+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIHS 211
+VSW MI Y++ S+AL++F++M G + +EFT ++V S G +++H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHC 186
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
L +K+ D ++YVG++LLD+YAK G I +A +FE + ++ V+ +++++GY Q EE
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL L+R+ + ++ N T +SV+ A S LA+L GKQ+H + +S S V + +S +D
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
MY+KCG+L S IF +QE+ + WN ++ G+ KH +EV+ LF M+++ + P+ V
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDG-MHPNEV 365
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
T ++LS C H GL + G F+ + G+ P HY C+VD+LGRAG + EA+E IK
Sbjct: 366 TFSSLLSVCGHTGLVEEGRR-FFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Query: 452 KMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------D 502
+PF+PTA+IWGSLL +C V+ N+++ +L E+E NAGN+ LS +
Sbjct: 425 SIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEE 484
Query: 503 VRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGY 562
+ R ++ V K G+S I++ +HTF + HPR E+ + L ++F++ GY
Sbjct: 485 IAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGY 544
Query: 563 VPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKY 622
P + LHDV+ +KE++L+ HSEKLAL FGL+ PE P+R++KNLRICVDCH F K
Sbjct: 545 KPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKA 604
Query: 623 ISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
S R + +RD NRFH G CSCGD+W
Sbjct: 605 ASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 154/275 (56%), Gaps = 12/275 (4%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+++L+ C E +++H +KT ++++ T L+ LY KC ++DA VF+ M +
Sbjct: 166 SSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQD 225
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQI 209
++ V+W++M++ Y Q +AL L+ + R E N+FT ++V G+Q+
Sbjct: 226 KSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQM 285
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H++I KS + ++V+V SS +DMYAK G + E+ IF + E+++ IISG+A+
Sbjct: 286 HAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARP 345
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE--VPSYVVLQN 327
+E + LF +++ +GM N VT++S+L+ ++ G++ ++R+ + VV +
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYGLSPNVVHYS 404
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWNAML 361
++D+ + G L+ + + ++ + T W ++L
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 111/218 (50%), Gaps = 24/218 (11%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
++++ C + AL EG+++HA + K+ + +VF+ + + +Y KC SLR++ +F E+ E
Sbjct: 267 SSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQE 326
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQI 209
+N+ W +IS +++ + + LF +M + G PNE TF+++ S+ GR+
Sbjct: 327 KNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRF 386
Query: 210 HSLIIKSNY--DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG----- 262
L +++ Y +V S ++D+ + G + EA + + +P TA I G
Sbjct: 387 FKL-MRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIP----FDPTASIWGSLLAS 441
Query: 263 ---YAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA 297
Y L L E A + +L E N+V +++ A
Sbjct: 442 CRVYKNLELAEVAAEKLFELEPEN-AGNHVLLSNIYAA 478
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 427 bits (1099), Expect = e-120, Method: Compositional matrix adjust.
Identities = 215/558 (38%), Positives = 332/558 (59%), Gaps = 16/558 (2%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
LR G ++H+ KT ++ T I LY+KC ++ +F E + ++V++ AMI
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHG 296
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS-----MLGRQIHSLIIKSNYDAHVYV 224
Y+ G +L+LF +++ SG T ++ ML IH +KSN+ +H V
Sbjct: 297 YTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASV 356
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGM 284
++L +Y+K +I AR +F+ PE+ + S A+ISGY Q GL E+A+ LFR+++
Sbjct: 357 STALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEF 416
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
N VT +L+A + L +L GK VH+ V ++ S + + +LI MY+KCG++ +RR
Sbjct: 417 SPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARR 476
Query: 345 IFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGG 404
+FD M ++ ++WN M+ GYG HG+G+E L +F M + P VT L VL CSH G
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG-ITPTPVTFLCVLYACSHAG 535
Query: 405 LEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGS 464
L G +IF M + G EP +HY C+VD+LGRAG ++ A +FI+ M EP +++W +
Sbjct: 536 LVKEGDEIFNSMIH-RYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWET 594
Query: 465 LLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAV 515
LLGAC +H + ++ V +L E++ N G + LS ++R K+ +
Sbjct: 595 LLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKL 654
Query: 516 MKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDE 575
K PG + IE+ + H F + D+SHP+ +E+Y K+++L + +EAGY P+ LHDV+E
Sbjct: 655 AKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEE 714
Query: 576 EQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRD 635
E++E ++ HSE+LA++FGLI+T G IR+IKNLR+C+DCH K ISKI R + +RD
Sbjct: 715 EERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRD 774
Query: 636 KNRFHQIVGGKCSCGDYW 653
NRFH G CSCGDYW
Sbjct: 775 ANRFHHFKDGVCSCGDYW 792
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 155/303 (51%), Gaps = 13/303 (4%)
Query: 111 REGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAY 170
R G+ +H + + L + ++ +Y K + DAR VFD MPE++ + W MIS Y
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 171 SQRGYASQALNLFVQML-RSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAH 221
+ +++ +F ++ S T + T + LG QIHSL K+ +H
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
YV + + +Y+K GKI +F + D+V+ A+I GY G E +L LF++L
Sbjct: 256 DYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
G + T S L +SG L + +H + L+S S+ + +L +YSK +
Sbjct: 316 SGARLRSSTLVS-LVPVSGHLMLIYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIES 372
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+R++FD E+++ SWNAM+ GY ++G + + LF M +++E P+ VT+ +LS C+
Sbjct: 373 ARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM-QKSEFSPNPVTITCILSACA 431
Query: 402 HGG 404
G
Sbjct: 432 QLG 434
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 196/448 (43%), Gaps = 50/448 (11%)
Query: 115 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRG 174
+ HA +I + + L T+L + ++ AR +F + +V + ++ +S
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 175 YASQALNLFVQMLRSGT-EPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVG 225
+L++F + +S +PN T+A S GR IH + D+ + +G
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLG 157
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG-M 284
S+++ MY K ++ +AR +F+ +PE+D + +ISGY + + E++ +FR L E
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
+ + T +L A++ L L G Q+H+ ++ S+ + I +YSKCG +
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 345 IFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT-LMREENEVKPDGVTMLAVLSG---- 399
+F ++ ++++NAM+ GY +GE L LF LM ++ + L +SG
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 400 -------------CSHGGLEDRGLDIFYDM----TSGKIGVE-PKKE--HYGCVVDLLGR 439
SH + ++ + ++ K+ E P+K + ++ +
Sbjct: 338 IYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQ 397
Query: 440 AGRVEEAFEFIKKM---PFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE--------- 487
G E+A ++M F P +L AC+ + +G +V H L+
Sbjct: 398 NGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV-HDLVRSTDFESSIY 456
Query: 488 IETGNAGNYFFLS--XDVRSLRDMMLKK 513
+ T G Y + R L D+M KK
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKK 484
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L+ C AL G+ VH + T + S+++ T LI +Y KC S+ +AR +FD M ++N
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQI-H 210
V+W MIS Y G +ALN+F +ML SG P TF V G +I +
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL 248
S+I + ++ V + ++D+ + G + A E +
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMY 232
R +S ++ T + F +T S L Q H+ II + + + + L
Sbjct: 4 RTVSSATAETTAALISKNTYLDFFKRSTSISHLA-QTHAQIILHGFRNDISLLTKLTQRL 62
Query: 233 AKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR-GEGMQSNYVTY 291
+ G I+ AR IF + DV ++ G++ +L +F LR ++ N TY
Sbjct: 63 SDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTY 122
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE 351
A ++A SG G+ +H + S ++L ++++ MY K + +R++FD M E
Sbjct: 123 AFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPE 182
Query: 352 RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ + WN M+ GY K+ E +++F + E+ + D T+L +L +
Sbjct: 183 KDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 426 bits (1096), Expect = e-119, Method: Compositional matrix adjust.
Identities = 232/603 (38%), Positives = 354/603 (58%), Gaps = 33/603 (5%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYL-PSVFLRTRLIVLYT 140
L +M L G + +++L C LR G+ +HA+ +K L + F+ + L+ +Y
Sbjct: 290 LREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 349
Query: 141 KCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRS-GTEPNEFTFA 199
C + R VFD M +R + W AMI+ YSQ + +AL LF+ M S G N T A
Sbjct: 350 NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 409
Query: 200 TVXSMLGRQ--------IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
V R IH ++K D +V ++L+DMY++ GKI A IF + +R
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRG-----------EGMQSNYVTYASVLTALSG 300
D+V+ +I+GY E+AL L +++ ++ N +T ++L + +
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 301 LASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAM 360
L++L GK++H + +++ + + V + ++L+DMY+KCG L SR++FD + ++ V++WN +
Sbjct: 530 LSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVI 589
Query: 361 LVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGK 420
++ YG HG G+E ++L +M + VKP+ VT ++V + CSH G+ D GL IFY M
Sbjct: 590 IMAYGMHGNGQEAIDLLRMMMVQG-VKPNEVTFISVFAACSHSGMVDEGLRIFYVMKP-D 647
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE-PTAAIWGSLLGACSVHSNVDIGV 479
GVEP +HY CVVDLLGRAGR++EA++ + MP + A W SLLGA +H+N++IG
Sbjct: 648 YGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGE 707
Query: 480 FVGHRLLEIETGNAGNYFFLSXDVRS---------LRDMMLKKAVMKEPGRSRIELDQVL 530
L+++E A +Y L+ S +R M ++ V KEPG S IE +
Sbjct: 708 IAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEV 767
Query: 531 HTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLA 590
H F A D SHP+ E++ ++ L R ++ GYVPD SCVLH+V+E++KE +L GHSEKLA
Sbjct: 768 HKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLA 827
Query: 591 LSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCG 650
++FG+++T G IRV KNLR+C DCH K+ISKI RE+ LRD RFH+ G CSCG
Sbjct: 828 IAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCG 887
Query: 651 DYW 653
DYW
Sbjct: 888 DYW 890
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 198/407 (48%), Gaps = 17/407 (4%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRY-LPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
+ ALL + + G+++HAH+ K Y + SV + L+ LY KC VFD
Sbjct: 99 AFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR 158
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS----------- 203
+ ERN VSW ++IS+ AL F ML EP+ FT +V +
Sbjct: 159 ISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGL 218
Query: 204 MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
M+G+Q+H+ ++ + + ++ ++L+ MY K GK+ ++ + RD+V+ ++S
Sbjct: 219 MMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSL 277
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS-EVPSY 322
Q EAL+ R++ EG++ + T +SVL A S L L GK++H + L++ +
Sbjct: 278 CQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDEN 337
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
+ ++L+DMY C + RR+FD M +R + WNAM+ GY ++ +E L LF M E
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEE 397
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR 442
+ + TM V+ C G R I + K G++ + ++D+ R G+
Sbjct: 398 SAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV--KRGLDRDRFVQNTLMDMYSRLGK 455
Query: 443 VEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIE 489
++ A KM + W +++ + + + + H++ +E
Sbjct: 456 IDIAMRIFGKME-DRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 70/121 (57%), Gaps = 2/121 (1%)
Query: 283 GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR-SEVPSYVVLQNSLIDMYSKCGNLTY 341
G++ + + ++L A++ L ++ GKQ+H HV + V + N+L+++Y KCG+
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
++FD + ER +SWN+++ + LE F M +EN V+P T+++V++ CS
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDEN-VEPSSFTLVSVVTACS 210
Query: 402 H 402
+
Sbjct: 211 N 211
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/604 (38%), Positives = 348/604 (57%), Gaps = 52/604 (8%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFD------ 153
+L C +A +EGQ++H H++K +++ T LI +Y + L DA VFD
Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD 199
Query: 154 -------------------------EMPERNVVSWTAMISAYSQRGYASQALNLFVQMLR 188
E+P ++VVSW AMIS Y++ G +AL LF M++
Sbjct: 200 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 189 SGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE 240
+ P+E T TV S LGRQ+H I + +++ + ++L+D+Y+K G++
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 241 ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSG 300
A G+FE LP +DV+S +I GY + L +EAL LF+++ G N VT S+L A +
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 301 LASLDHGKQVHNHVLR--SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWN 358
L ++D G+ +H ++ + V + L+ SLIDMY+KCG++ + ++F+++ +++ SWN
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 359 AMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTS 418
AM+ G+ HG +LF+ MR+ ++PD +T + +LS CSH G+ D G IF MT
Sbjct: 440 AMIFGFAMHGRADASFDLFSRMRKIG-IQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ 498
Query: 419 GKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIG 478
+ PK EHYGC++DLLG +G +EA E I M EP IW SLL AC +H NV++G
Sbjct: 499 -DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELG 557
Query: 479 VFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQV 529
L++IE N G+Y LS +V R ++ K + K PG S IE+D V
Sbjct: 558 ESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 617
Query: 530 LHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKL 589
+H F D+ HPR E+Y ++E+ V ++AG+VPD S VL +++EE KE L HSEKL
Sbjct: 618 VHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 677
Query: 590 ALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSC 649
A++FGLIST G + ++KNLR+C +CH K ISKIY RE+ RD+ RFH G CSC
Sbjct: 678 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSC 737
Query: 650 GDYW 653
DYW
Sbjct: 738 NDYW 741
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 121/432 (28%), Positives = 206/432 (47%), Gaps = 47/432 (10%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLI---VLYTKCDSLRDARHVFDEM 155
+LL+ C + ++LR +HA MIK + + ++LI +L + L A VF +
Sbjct: 38 SLLHNCKTLQSLR---IIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GR 207
E N++ W M ++ AL L+V M+ G PN +TF V G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI-------- 259
QIH ++K D +YV +SL+ MY ++G++ +A +F+ P RDVVS TA+
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 260 -----------------------ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
ISGYA+ G +EAL+LF+ + ++ + T +V++
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 297 ALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS 356
A + S++ G+QVH + S + + N+LID+YSKCG L + +F+ + + V+S
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 357 WNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDM 416
WN ++ GY +E L LF M E P+ VTML++L C+H G D G I +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 417 TSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVD 476
GV ++D+ + G +E A + + + + W +++ ++H D
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMIFGFAMHGRAD 452
Query: 477 IGVFVGHRLLEI 488
+ R+ +I
Sbjct: 453 ASFDLFSRMRKI 464
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 10/121 (8%)
Query: 99 ALLNECVSKRALREGQRVHAHMIK--TRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++L C A+ G+ +H ++ K + LRT LI +Y KC + A VF+ +
Sbjct: 372 SILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL 431
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
+++ SW AMI ++ G A + +LF +M + G +P++ TF + S LGR
Sbjct: 432 HKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRH 491
Query: 209 I 209
I
Sbjct: 492 I 492
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 222/588 (37%), Positives = 334/588 (56%), Gaps = 49/588 (8%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVV----------- 161
G+++H +IK + + + + L+ +Y + DA+ VF + +RN V
Sbjct: 158 GKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLA 217
Query: 162 -------------------SWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX 202
SW AMI +Q G A +A+ F +M G + +++ F +V
Sbjct: 218 CGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 203 SMLG--------RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVV 254
G +QIH+ II++N+ H+YVGS+L+DMY K +H A+ +F+ + +++VV
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 255 SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV 314
S TA++ GY Q G EEA+ +F ++ G+ ++ T ++A + ++SL+ G Q H
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 315 LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVL 374
+ S + YV + NSL+ +Y KCG++ S R+F+ M R +SW AM+ Y + G E +
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETI 457
Query: 375 ELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVV 434
+LF M + +KPDGVT+ V+S CS GL ++G F MTS + G+ P HY C++
Sbjct: 458 QLFDKMVQHG-LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS-EYGIVPSIGHYSCMI 515
Query: 435 DLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAG 494
DL R+GR+EEA FI MPF P A W +LL AC N++IG + L+E++ +
Sbjct: 516 DLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPA 575
Query: 495 NYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREE 545
Y LS V LR M +K V KEPG+S I+ LH+F A D S P ++
Sbjct: 576 GYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQ 635
Query: 546 VYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIR 605
+Y K++EL+ + + GY PD S V HDV+E K K+L HSE+LA++FGLI P G PIR
Sbjct: 636 IYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIR 695
Query: 606 VIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
V KNLR+CVDCHN K+IS + GRE+ +RD RFH+ G CSCGD+W
Sbjct: 696 VGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 182 bits (463), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 198/388 (51%), Gaps = 57/388 (14%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM 186
P++F L++ Y+K + + F+++P+R+ V+W +I YS G A+ + M
Sbjct: 70 PNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
Query: 187 LRSGTEPNEFTFATVXSML-----------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKD 235
+R + T T+ +ML G+QIH +IK +++++ VGS LL MYA
Sbjct: 130 MRDFSA--NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV 187
Query: 236 GKIHEARGIFECLPER------------------------------DVVSCTAIISGYAQ 265
G I +A+ +F L +R D VS A+I G AQ
Sbjct: 188 GCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQ 247
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
GL +EA++ FR+++ +G++ + + SVL A GL +++ GKQ+H ++R+ ++ +
Sbjct: 248 NGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYV 307
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
++LIDMY KC L Y++ +FD M+++ V+SW AM+VGYG+ G E +++F M+
Sbjct: 308 GSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG- 366
Query: 386 VKPDGVTMLAVLSGCSH-GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCV----VDLLGRA 440
+ PD T+ +S C++ LE+ +TSG I HY V V L G+
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI-------HYVTVSNSLVTLYGKC 419
Query: 441 GRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
G ++++ +M A W +++ A
Sbjct: 420 GDIDDSTRLFNEMNVR-DAVSWTAMVSA 446
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 161/303 (53%), Gaps = 22/303 (7%)
Query: 79 QQPLLQMAL-CGHDMKFKG-------YNALLNECVSKRALREGQRVHAHMIKTRYLPSVF 130
Q L + A+ C +MK +G + ++L C A+ EG+++HA +I+T + ++
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 131 LRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG 190
+ + LI +Y KC L A+ VFD M ++NVVSWTAM+ Y Q G A +A+ +F+ M RSG
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSG 366
Query: 191 TEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEAR 242
+P+ +T S G Q H I S +V V +SL+ +Y K G I ++
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDST 426
Query: 243 GIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLA 302
+F + RD VS TA++S YAQ G E + LF ++ G++ + VT V++A S
Sbjct: 427 RLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 303 SLDHGKQVHNHVLRSE---VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWN 358
++ G Q + ++ SE VPS + + +ID++S+ G L + R + M + W
Sbjct: 487 LVEKG-QRYFKLMTSEYGIVPS-IGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWT 544
Query: 359 AML 361
+L
Sbjct: 545 TLL 547
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L M G D ++ C + +L EG + H I + + V + L+ LY K
Sbjct: 359 FLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGK 418
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
C + D+ +F+EM R+ VSWTAM+SAY+Q G A + + LF +M++ G +P+ T V
Sbjct: 419 CGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGV 478
Query: 202 XSMLGR-------QIHSLIIKSNYDAHVYVG--SSLLDMYAKDGKIHEARGIFECLP-ER 251
S R Q + ++ S Y +G S ++D++++ G++ EA +P
Sbjct: 479 ISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPP 538
Query: 252 DVVSCTAIISG 262
D + T ++S
Sbjct: 539 DAIGWTTLLSA 549
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 10/136 (7%)
Query: 284 MQSNYVTYASVLTALSGLASLDHG---KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLT 340
M SNY Y+ + GL + + K +H +++R+ L N+++ Y+ + T
Sbjct: 1 MASNY--YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSST 58
Query: 341 YSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
Y+RR+FD + + + SWN +L+ Y K G E+ F + + DGVT ++ G
Sbjct: 59 YARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDR-----DGVTWNVLIEGY 113
Query: 401 SHGGLEDRGLDIFYDM 416
S GL + + M
Sbjct: 114 SLSGLVGAAVKAYNTM 129
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 226/606 (37%), Positives = 337/606 (55%), Gaps = 51/606 (8%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y L+ C RAL EG++VH H+ + ++P + + RL+ +Y KC SL DAR VFDEMP
Sbjct: 88 YCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMP 147
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRS--------------------------- 189
R++ SW M++ Y++ G +A LF +M
Sbjct: 148 NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSL 207
Query: 190 -----GTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDG 236
+ PN FT + + G++IH I+++ D+ + SSL+DMY K G
Sbjct: 208 MQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCG 267
Query: 237 KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
I EAR IF+ + E+DVVS T++I Y + E LF +L G + N T+A VL
Sbjct: 268 CIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLN 327
Query: 297 ALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS 356
A + L + + GKQVH ++ R Y +SL+DMY+KCGN+ ++ + D + ++S
Sbjct: 328 ACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVS 387
Query: 357 WNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDM 416
W +++ G ++G+ E L+ F L+ + KPD VT + VLS C+H GL ++GL+ FY +
Sbjct: 388 WTSLIGGCAQNGQPDEALKYFDLLLKSG-TKPDHVTFVNVLSACTHAGLVEKGLEFFYSI 446
Query: 417 TSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVD 476
T K + +HY C+VDLL R+GR E+ I +MP +P+ +W S+LG CS + N+D
Sbjct: 447 TE-KHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNID 505
Query: 477 IGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELD 527
+ L +IE N Y ++ + +R M + V K PG S E+
Sbjct: 506 LAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIK 565
Query: 528 QVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSE 587
+ H F A+D SHP ++ ++EL + KE GYVP S VLHDV++EQKE+ L+ HSE
Sbjct: 566 RKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSE 625
Query: 588 KLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKC 647
KLA++F ++ST EG I+V KNLR CVDCH K+IS I R++++RD RFH G+C
Sbjct: 626 KLAVAFAILSTEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQC 685
Query: 648 SCGDYW 653
SCGDYW
Sbjct: 686 SCGDYW 691
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 159/333 (47%), Gaps = 44/333 (13%)
Query: 184 VQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKD 235
VQ+L +P T+ + + G+++H I S + + + + LL MYAK
Sbjct: 74 VQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKC 133
Query: 236 GKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL---------------- 279
G + +AR +F+ +P RD+ S +++GYA++GL EEA LF ++
Sbjct: 134 GSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 280 ----------------RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
R + N T + + A + + + GK++H H++R+ + S
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDE 253
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
VL +SL+DMY KCG + +R IFD + E+ V+SW +M+ Y K RE LF+ +
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGS 313
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRV 443
E +P+ T VL+ C+ E+ G + MT ++G +P +VD+ + G +
Sbjct: 314 CE-RPNEYTFAGVLNACADLTTEELGKQVHGYMT--RVGFDPYSFASSSLVDMYTKCGNI 370
Query: 444 EEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVD 476
E A + P +P W SL+G C+ + D
Sbjct: 371 ESAKHVVDGCP-KPDLVSWTSLIGGCAQNGQPD 402
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 422 bits (1085), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/561 (40%), Positives = 331/561 (59%), Gaps = 20/561 (3%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
L ++VH H IK + F+ T LI Y++ +++A +F E ++V+W AM++
Sbjct: 433 LSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWNAMMAG 491
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIHSLIIKSNYDAH 221
Y+Q + L LF M + G ++FT ATV G +Q+H+ IKS YD
Sbjct: 492 YTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLD 551
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
++V S +LDMY K G + A+ F+ +P D V+ T +ISG + G +E A +F Q+R
Sbjct: 552 LWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL 611
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
G+ + T A++ A S L +L+ G+Q+H + L+ + + SL+DMY+KCG++
Sbjct: 612 MGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDD 671
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ +F ++ + +WNAMLVG +HGEG+E L+LF M+ +KPD VT + VLS CS
Sbjct: 672 AYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLG-IKPDKVTFIGVLSACS 730
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAI 461
H GL M G G++P+ EHY C+ D LGRAG V++A I+ M E +A++
Sbjct: 731 HSGLVSEAYKHMRSM-HGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASM 789
Query: 462 WGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLK 512
+ +LL AC V + + G V +LLE+E ++ Y LS +++ R MM
Sbjct: 790 YRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKG 849
Query: 513 KAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHD 572
V K+PG S IE+ +H F DRS+ + E +Y KVK++ K+ GYVP+ L D
Sbjct: 850 HKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVD 909
Query: 573 VDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVS 632
V+EE+KE+ L HSEKLA++FGL+STP PIRVIKNLR+C DCHN KYI+K+Y RE+
Sbjct: 910 VEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIV 969
Query: 633 LRDKNRFHQIVGGKCSCGDYW 653
LRD NRFH+ G CSCGDYW
Sbjct: 970 LRDANRFHRFKDGICSCGDYW 990
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 193/383 (50%), Gaps = 16/383 (4%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L V +L GQ+VH +K + + LI +Y K AR VFD M ER+
Sbjct: 321 MLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERD 380
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM---------LGRQIH 210
++SW ++I+ +Q G +A+ LF+Q+LR G +P+++T +V L +Q+H
Sbjct: 381 LISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVH 440
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
IK N + +V ++L+D Y+++ + EA +FE D+V+ A+++GY Q
Sbjct: 441 VHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFE-RHNFDLVAWNAMMAGYTQSHDGH 499
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
+ L LF + +G +S+ T A+V L +++ GKQVH + ++S + + + ++
Sbjct: 500 KTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGIL 559
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
DMY KCG+++ ++ FD++ ++W M+ G ++GE +F+ MR V PD
Sbjct: 560 DMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMG-VLPDE 618
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC-VVDLLGRAGRVEEAFEF 449
T+ + S ++G I + +P G +VD+ + G +++A+
Sbjct: 619 FTIATLAKASSCLTALEQGRQIHANALKLNCTNDP---FVGTSLVDMYAKCGSIDDAYCL 675
Query: 450 IKKMPFEPTAAIWGSLLGACSVH 472
K++ A W ++L + H
Sbjct: 676 FKRIEMMNITA-WNAMLVGLAQH 697
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 135/234 (57%), Gaps = 13/234 (5%)
Query: 109 ALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
A+ +G++VHA+ IK+ Y +++ + ++ +Y KC + A+ FD +P + V+WT MIS
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDA 220
+ G +A ++F QM G P+EFT AT+ GRQIH+ +K N
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTN 651
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
+VG+SL+DMYAK G I +A +F+ + ++ + A++ G AQ G +E L LF+Q++
Sbjct: 652 DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMK 711
Query: 281 GEGMQSNYVTYASVLTAL--SGLAS--LDHGKQVH-NHVLRSEVPSYVVLQNSL 329
G++ + VT+ VL+A SGL S H + +H ++ ++ E+ Y L ++L
Sbjct: 712 SLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADAL 765
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 24/317 (7%)
Query: 167 ISAYSQRGYASQALNLFVQMLRSGTEPNEFTF----ATVXSM----LGRQIHSLIIKSNY 218
+S Y G S L F M+ S E ++ TF AT + LG+Q+H + +K
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQ 278
D + V +SL++MY K K AR +F+ + ERD++S ++I+G AQ GL+ EA+ LF Q
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 279 LRGEGMQSNYVTYASVLTALSGLA-SLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYS--- 334
L G++ + T SVL A S L L KQVH H ++ S + +LID YS
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNR 466
Query: 335 --KCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVT 392
K + + R FD +++WNAM+ GY + +G + L+LF LM ++ E + D T
Sbjct: 467 CMKEAEILFERHNFD------LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGE-RSDDFT 519
Query: 393 MLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKK 452
+ V C ++G + + K G + ++D+ + G + A
Sbjct: 520 LATVFKTCGFLFAINQGKQV--HAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS 577
Query: 453 MPFEPTAAIWGSLLGAC 469
+P P W +++ C
Sbjct: 578 IPV-PDDVAWTTMISGC 593
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 147/329 (44%), Gaps = 30/329 (9%)
Query: 77 HLQQPLLQMALCGHDMKFKG---YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRT 133
++QQ L + D+ + + +L C+ + + H + K F+
Sbjct: 125 NIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAG 184
Query: 134 RLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEP 193
L+ +Y K +++ + +F+EMP R+VV W M+ AY + G+ +A++L SG P
Sbjct: 185 ALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNP 244
Query: 194 NEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
NE T + + G + +KS + + D + I +G+ E
Sbjct: 245 NEITLRLLARISGDDSDAGQVKSFANGN--------DASSVSEIIFRNKGLSE------- 289
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
Y G L F + ++ + VT+ +L + SL G+QVH
Sbjct: 290 ---------YLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCM 340
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREV 373
L+ + + + NSLI+MY K ++R +FD M ER ++SWN+++ G ++G E
Sbjct: 341 ALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEA 400
Query: 374 LELF-TLMREENEVKPDGVTMLAVLSGCS 401
+ LF L+R +KPD TM +VL S
Sbjct: 401 VCLFMQLLR--CGLKPDQYTMTSVLKAAS 427
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 18/273 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ L ++ L G+ HA ++ P FL LI +Y+KC SL AR VFD+MP
Sbjct: 42 WFGFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMP 101
Query: 157 ERNVVSWTAMISAYSQRGYA-----SQALNLFVQMLRSGTEPNEFTFATVXSML------ 205
+R++VSW ++++AY+Q QA LF + + + T + + +
Sbjct: 102 DRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
Query: 206 --GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
H K D +V +L+++Y K GK+ E + +FE +P RDVV ++ Y
Sbjct: 162 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAY 221
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG--KQVHNHVLRSEVPS 321
++G EEA+DL G+ N +T +L +SG S D G K N S V S
Sbjct: 222 LEMGFKEEAIDLSSAFHSSGLNPNEITL-RLLARISGDDS-DAGQVKSFANGNDASSV-S 278
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV 354
++ +N + Y G + + F M E V
Sbjct: 279 EIIFRNKGLSEYLHSGQYSALLKCFADMVESDV 311
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 307 GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGK 366
GK H +L E L N+LI MYSKCG+LTY+RR+FD M +R ++SWN++L Y +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 367 HGEG-----REVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI 421
E ++ LF ++R++ V +T+ +L C H G + F+ KI
Sbjct: 118 SSECVVENIQQAFLLFRILRQD-VVYTSRMTLSPMLKLCLHSGYV-WASESFHGYAC-KI 174
Query: 422 GVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
G++ + G +V++ + G+V+E ++MP+ +W +L A
Sbjct: 175 GLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV-VLWNLMLKA 220
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 419 bits (1076), Expect = e-117, Method: Compositional matrix adjust.
Identities = 227/583 (38%), Positives = 342/583 (58%), Gaps = 28/583 (4%)
Query: 95 KGYNALLNECVSKRALREGQRVHAHMIKT---RYLPSVFLRTRLIVLYTKCDSLRDARHV 151
+ Y LL+ C+S ++L G ++ + ++ R+ P L ++LI L++ C L AR +
Sbjct: 132 EAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPK--LLSKLITLFSVCRRLDLARKI 189
Query: 152 FDEMPERNVVS---WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM---- 204
FD++ + ++++ W AM YS+ G AL ++V ML S EP F+ +
Sbjct: 190 FDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDL 249
Query: 205 ----LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
+GR IH+ I+K V + LL +Y + G +AR +F+ + ER+VV+ ++I
Sbjct: 250 KDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLI 309
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP 320
S ++ E +LFR+++ E + ++ T ++L A S +A+L GK++H +L+S+
Sbjct: 310 SVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEK 369
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLM 380
V L NSL+DMY KCG + YSRR+FD M + + SWN ML Y +G EV+ LF M
Sbjct: 370 PDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWM 429
Query: 381 REENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRA 440
E V PDG+T +A+LSGCS GL + GL +F M + + V P EHY C+VD+LGRA
Sbjct: 430 IESG-VAPDGITFVALLSGCSDTGLTEYGLSLFERMKT-EFRVSPALEHYACLVDILGRA 487
Query: 441 GRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS 500
G+++EA + I+ MPF+P+A+IWGSLL +C +H NV +G L +E N GNY +S
Sbjct: 488 GKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVS 547
Query: 501 X---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKV- 550
+V +R+MM ++ V KE G S +++ + F A R + Y KV
Sbjct: 548 NIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVW 607
Query: 551 KELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNL 610
EL +++GY P+ S VLHDVDEE K + GHSE+LA ++ LI T EGVPIR+ KNL
Sbjct: 608 TELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGEGVPIRITKNL 667
Query: 611 RICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
R+C DCH++ K +S++ R + LRD RFH V G CSC DYW
Sbjct: 668 RVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 226/575 (39%), Positives = 346/575 (60%), Gaps = 27/575 (4%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKC---DSLRDARHVFDEMP 156
L+++C S LRE ++ A+ IK+ ++ V +LI T+ S+ ARH+F+ M
Sbjct: 35 LISKCNS---LRELMQIQAYAIKS-HIEDVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
E ++V + +M YS+ + +LFV++L G P+ +TF ++ GRQ
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H L +K D +VYV +L++MY + + AR +F+ + E VV A+I+GYA+
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
EAL LFR+++G+ ++ N +T SVL++ + L SLD GK +H + + YV + +
Sbjct: 211 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 270
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
LIDM++KCG+L + IF+ M+ + +W+AM+V Y HG+ + + +F MR EN V+P
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSEN-VQP 329
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D +T L +L+ CSH G + G F M S K G+ P +HYG +VDLL RAG +E+A+E
Sbjct: 330 DEITFLGLLNACSHTGRVEEGRKYFSQMVS-KFGIVPSIKHYGSMVDLLSRAGNLEDAYE 388
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------- 501
FI K+P PT +W LL ACS H+N+D+ V R+ E++ + G+Y LS
Sbjct: 389 FIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKK 448
Query: 502 --DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
V SLR +M + +K PG S IE++ V+H F + D +++ + E+ K
Sbjct: 449 WEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKL 508
Query: 560 AGYVPDLSCVLH-DVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHN 618
+GYVPD S V+H ++++++KE L HSEKLA++FGL++TP G IRV+KNLR+C DCHN
Sbjct: 509 SGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHN 568
Query: 619 FAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
AK IS I+GR+V LRD RFH GKCSCGD+W
Sbjct: 569 AAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 153/283 (54%), Gaps = 12/283 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +LL C +AL EG+++H +K +V++ LI +YT+C+ + AR VFD +
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
E VV + AMI+ Y++R ++AL+LF +M +PNE T +V S LG+
Sbjct: 192 EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKW 251
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH K ++ +V V ++L+DM+AK G + +A IFE + +D + +A+I YA G
Sbjct: 252 IHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGK 311
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE--VPSYVVLQ 326
E+++ +F ++R E +Q + +T+ +L A S ++ G++ + ++ VPS +
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPS-IKHY 370
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWNAMLVGYGKHG 368
S++D+ S+ GNL + D + T M W +L H
Sbjct: 371 GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 417 bits (1073), Expect = e-117, Method: Compositional matrix adjust.
Identities = 221/574 (38%), Positives = 330/574 (57%), Gaps = 21/574 (3%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
+LL+ C G +H++ IK +F+ +LI LY + LRD + VFD M R
Sbjct: 252 SLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVR 311
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF---ATVXSMLG-----RQIH 210
+++SW ++I AY +A++LF +M S +P+ T A++ S LG R +
Sbjct: 312 DLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQ 371
Query: 211 SLIIKSNYDAH-VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
++ + + +G++++ MYAK G + AR +F LP DV+S IISGYAQ G
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFA 431
Query: 270 EEALDLFRQLRGEG-MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
EA++++ + EG + +N T+ SVL A S +L G ++H +L++ + V + S
Sbjct: 432 SEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTS 491
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
L DMY KCG L + +F + + WN ++ +G HG G + + LF M +E VKP
Sbjct: 492 LADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG-VKP 550
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D +T + +LS CSH GL D G F +M G+ P +HYGC+VD+ GRAG++E A +
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCF-EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALK 609
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------- 501
FIK M +P A+IWG+LL AC VH NVD+G L E+E + G + LS
Sbjct: 610 FIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGK 669
Query: 502 --DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
V +R + K + K PG S +E+D + F+ +++HP EE+Y ++ L + K
Sbjct: 670 WEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKM 729
Query: 560 AGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNF 619
GYVPD VL DV++++KE IL+ HSE+LA++F LI+TP IR+ KNLR+C DCH+
Sbjct: 730 IGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSV 789
Query: 620 AKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
K+ISKI RE+ +RD NRFH G CSCGDYW
Sbjct: 790 TKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 179 bits (455), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 209/406 (51%), Gaps = 25/406 (6%)
Query: 94 FKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFD 153
++ + ++L C R + +G ++H +K ++ V++ LI LY++ ++ +AR +FD
Sbjct: 153 YRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFD 209
Query: 154 EMPERNVVSWTAMISAYSQRGYASQALNL-----------FVQMLRSGTEPNEFTFATVX 202
EMP R++ SW AMIS Y Q G A +AL L V +L + TE +F
Sbjct: 210 EMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFN----- 264
Query: 203 SMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 262
G IHS IK ++ ++V + L+D+YA+ G++ + + +F+ + RD++S +II
Sbjct: 265 --RGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 263 YAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR-SEVPS 321
Y A+ LF+++R +Q + +T S+ + LS L + + V LR
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMR 381
+ + N+++ MY+K G + +R +F+ + V+SWN ++ GY ++G E +E++ +M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 382 EENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAG 441
EE E+ + T ++VL CS G +G+ + + K G+ + D+ G+ G
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL--KNGLYLDVFVVTSLADMYGKCG 500
Query: 442 RVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
R+E+A ++P + W +L+ H + + V + +L+
Sbjct: 501 RLEDALSLFYQIP-RVNSVPWNTLIACHGFHGHGEKAVMLFKEMLD 545
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/301 (31%), Positives = 169/301 (56%), Gaps = 11/301 (3%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
L+ + +HA ++ ++ + +V + +L+ LY ++ ARH FD + R+V +W MIS
Sbjct: 67 LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISG 126
Query: 170 YSQRGYASQALNLF-VQMLRSGTEPNEFTFATVXSML-----GRQIHSLIIKSNYDAHVY 223
Y + G +S+ + F + ML SG P+ TF +V G +IH L +K + VY
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVY 186
Query: 224 VGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG 283
V +SL+ +Y++ + AR +F+ +P RD+ S A+ISGY Q G +EAL L LR
Sbjct: 187 VAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLR--A 244
Query: 284 MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSR 343
M S VT S+L+A + + G +H++ ++ + S + + N LID+Y++ G L +
Sbjct: 245 MDS--VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 344 RIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHG 403
++FD M R ++SWN+++ Y + + + LF MR + ++PD +T++++ S S
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR-LSRIQPDCLTLISLASILSQL 361
Query: 404 G 404
G
Sbjct: 362 G 362
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 303 SLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLV 362
+L K +H ++ S+ V + L+++Y GN+ +R FD +Q R V +WN M+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 363 GYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
GYG+ G EV+ F+L + + PD T +VL C
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 417 bits (1071), Expect = e-116, Method: Compositional matrix adjust.
Identities = 222/555 (40%), Positives = 325/555 (58%), Gaps = 22/555 (3%)
Query: 116 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGY 175
V+ M K Y+ S L I Y + L +AR VFDEMP+R + +W AMI+ Q +
Sbjct: 16 VYGRMRKKNYMSSNIL----INGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 71
Query: 176 ASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAHVYVGSS 227
+ L+LF +M G P+E+T +V S +G+QIH IK + + V SS
Sbjct: 72 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 131
Query: 228 LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSN 287
L MY ++GK+ + + +P R++V+ +I G AQ G E L L++ ++ G + N
Sbjct: 132 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPN 191
Query: 288 YVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
+T+ +VL++ S LA G+Q+H ++ S V + +SLI MYSKCG L + + F
Sbjct: 192 KITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS 251
Query: 348 TMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLED 407
++ + W++M+ YG HG+G E +ELF M E+ ++ + V L +L CSH GL+D
Sbjct: 252 EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKD 311
Query: 408 RGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 467
+GL++F DM K G +P +HY CVVDLLGRAG +++A I+ MP + IW +LL
Sbjct: 312 KGLELF-DMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
Query: 468 ACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKE 518
AC++H N ++ V +L+I+ ++ Y L+ DV +R M K V KE
Sbjct: 371 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Query: 519 PGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQK 578
G S E +H F DRS + +E+Y +KEL++ K GY PD + VLHD+DEE+K
Sbjct: 431 AGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEK 490
Query: 579 EKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNR 638
E L+ HSEKLA++F L+ PEG PIR+IKNLR+C DCH KYIS I RE++LRD +R
Sbjct: 491 ESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSR 550
Query: 639 FHQIVGGKCSCGDYW 653
FH + GKCSCGDYW
Sbjct: 551 FHHFINGKCSCGDYW 565
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 140/306 (45%), Gaps = 22/306 (7%)
Query: 108 RALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMI 167
R++ GQ++H + IK + + + L +Y + L+D V MP RN+V+W +I
Sbjct: 105 RSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLI 164
Query: 168 SAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYD 219
+Q G L L+ M SG PN+ TF TV S G+QIH+ IK
Sbjct: 165 MGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGAS 224
Query: 220 AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
+ V V SSL+ MY+K G + +A F + D V +++IS Y G +EA++LF +
Sbjct: 225 SVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTM 284
Query: 280 RGE-GMQSNYVTYASVLTALSGLASLDHGKQ-----VHNHVLRSEVPSYVVLQNSLIDMY 333
+ M+ N V + ++L A S D G + V + + + Y ++D+
Sbjct: 285 AEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTC----VVDLL 340
Query: 334 SKCGNLTYSRRIFDTMQERT-VMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVT 392
+ G L + I +M +T ++ W +L H +F +E ++ P+
Sbjct: 341 GRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVF---KEILQIDPNDSA 397
Query: 393 MLAVLS 398
+L+
Sbjct: 398 CYVLLA 403
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 99 ALLNECVSKRALR-EGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+L+ C S A+R +GQ++HA IK V + + LI +Y+KC L DA F E +
Sbjct: 197 TVLSSC-SDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERED 255
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQML-RSGTEPNEFTF-----ATVXSML---GRQ 208
+ V W++MISAY G +A+ LF M ++ E NE F A S L G +
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLE 315
Query: 209 IHSLII-KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP-ERDVVSCTAIISG 262
+ +++ K + + + ++D+ + G + +A I +P + D+V ++S
Sbjct: 316 LFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSA 371
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 416 bits (1070), Expect = e-116, Method: Compositional matrix adjust.
Identities = 232/620 (37%), Positives = 340/620 (54%), Gaps = 70/620 (11%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L C S G+++H + + + ++F+ L+ +Y KC + +A VF M ++
Sbjct: 235 VLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKD 294
Query: 160 VVSWTAM-----------------------------------ISAYSQRGYASQALNLFV 184
VVSW AM IS Y+QRG +AL +
Sbjct: 295 VVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCR 354
Query: 185 QMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAHV-------YVGSSLL 229
QML SG +PNE T +V S M G++IH IK D V + L+
Sbjct: 355 QMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 230 DMYAKDGKIHEARGIFECLP--ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS- 286
DMYAK K+ AR +F+ L ERDVV+ T +I GY+Q G +AL+L ++ E Q+
Sbjct: 415 DMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTR 474
Query: 287 -NYVTYASVLTALSGLASLDHGKQVHNHVLRSE---VPSYVVLQNSLIDMYSKCGNLTYS 342
N T + L A + LA+L GKQ+H + LR++ VP +V N LIDMY+KCG+++ +
Sbjct: 475 PNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFV--SNCLIDMYAKCGSISDA 532
Query: 343 RRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH 402
R +FD M + ++W +++ GYG HG G E L +F MR K DGVT+L VL CSH
Sbjct: 533 RLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG-FKLDGVTLLVVLYACSH 591
Query: 403 GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIW 462
G+ D+G++ F M + GV P EHY C+VDLLGRAGR+ A I++MP EP +W
Sbjct: 592 SGMIDQGMEYFNRMKT-VFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVW 650
Query: 463 GSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMMLKK 513
+ L C +H V++G + ++ E+ + + G+Y LS DV +R +M K
Sbjct: 651 VAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHK 710
Query: 514 AVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDV 573
V K PG S +E + TF D++HP +E+Y + + R K+ GYVP+ LHDV
Sbjct: 711 GVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDV 770
Query: 574 DEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSL 633
D+E+K+ +L HSEKLAL++G+++TP+G IR+ KNLR+C DCH Y+S+I ++ L
Sbjct: 771 DDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIIL 830
Query: 634 RDKNRFHQIVGGKCSCGDYW 653
RD +RFH G CSC YW
Sbjct: 831 RDSSRFHHFKNGSCSCKGYW 850
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 205/427 (48%), Gaps = 56/427 (13%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+ C ++R G+ HA + T ++ +VF+ L+ +Y++C SL DAR VFDEM +
Sbjct: 133 VFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWD 192
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRS-GTEPNEFTFATVXS--------MLGRQIH 210
VVSW ++I +Y++ G AL +F +M G P+ T V LG+Q+H
Sbjct: 193 VVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLH 252
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI----------- 259
+ S +++VG+ L+DMYAK G + EA +F + +DVVS A+
Sbjct: 253 CFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFE 312
Query: 260 ------------------------ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL 295
ISGYAQ GL EAL + RQ+ G++ N VT SVL
Sbjct: 313 DAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVL 372
Query: 296 TALSGLASLDHGKQVHNHVLRSEVP-------SYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
+ + + +L HGK++H + ++ + ++ N LIDMY+KC + +R +FD+
Sbjct: 373 SGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDS 432
Query: 349 M--QERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN-EVKPDGVTMLAVLSGCSHGGL 405
+ +ER V++W M+ GY +HG+ + LEL + M EE+ + +P+ T+ L C+
Sbjct: 433 LSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAA 492
Query: 406 EDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSL 465
G I + P C++D+ + G + +A M W SL
Sbjct: 493 LRIGKQIHAYALRNQQNAVPLFVS-NCLIDMYAKCGSISDARLVFDNM-MAKNEVTWTSL 550
Query: 466 LGACSVH 472
+ +H
Sbjct: 551 MTGYGMH 557
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 161/308 (52%), Gaps = 14/308 (4%)
Query: 131 LRTRLIVLYTKCDSLRDARHVFDEMP--ERNVVSWTAMISAYSQRGYASQALNLFVQMLR 188
L + LI Y L A + P + V W ++I +Y G A++ L LF M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 189 SGTEPNEFTFATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE 240
P+ +TF V G H+L + + + ++V+VG++L+ MY++ + +
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 241 ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE-GMQSNYVTYASVLTALS 299
AR +F+ + DVVS +II YA+LG + AL++F ++ E G + + +T +VL +
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 300 GLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNA 359
L + GKQ+H + SE+ + + N L+DMY+KCG + + +F M + V+SWNA
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG 419
M+ GY + G + + LF M+EE ++K D VT A +SG + GL L + M S
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEE-KIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 420 KIGVEPKK 427
G++P +
Sbjct: 360 --GIKPNE 365
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/296 (31%), Positives = 154/296 (52%), Gaps = 28/296 (9%)
Query: 99 ALLNECVSKRALREGQRVHAHMI-------KTRYLPSVFLRTRLIVLYTKCDSLRDARHV 151
++L+ C S AL G+ +H + I K + + +LI +Y KC + AR +
Sbjct: 370 SVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAM 429
Query: 152 FDEMP--ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG--TEPNEFTF-------AT 200
FD + ER+VV+WT MI YSQ G A++AL L +M T PN FT A+
Sbjct: 430 FDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACAS 489
Query: 201 VXSM-LGRQIHSLIIKSNYDA-HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTA 258
+ ++ +G+QIH+ +++ +A ++V + L+DMYAK G I +AR +F+ + ++ V+ T+
Sbjct: 490 LAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTS 549
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR-- 316
+++GY G EEAL +F ++R G + + VT VL A S +D G + N +
Sbjct: 550 LMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVF 609
Query: 317 --SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM-QERTVMSWNAMLVGYGKHGE 369
S P + L+D+ + G L + R+ + M E + W A L HG+
Sbjct: 610 GVSPGPEHYA---CLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGK 662
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 9/249 (3%)
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERD--VVSCTAIISGYAQLGLDEEALDLFRQLRGEG 283
S L+ Y G + A + P D V ++I Y G + L LF +
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 284 MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSR 343
+ T+ V A ++S+ G+ H L + S V + N+L+ MYS+C +L+ +R
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 344 RIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHG 403
++FD M V+SWN+++ Y K G+ + LE+F+ M E +PD +T++ VL C+
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 404 GLEDRGLDIF-YDMTSGKIGVEPKKEHYG-CVVDLLGRAGRVEEAFEFIKKMPFEPTAAI 461
G G + + +TS I + G C+VD+ + G ++EA M + +
Sbjct: 243 GTHSLGKQLHCFAVTSEMI----QNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS- 297
Query: 462 WGSLLGACS 470
W +++ S
Sbjct: 298 WNAMVAGYS 306
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/604 (36%), Positives = 347/604 (57%), Gaps = 52/604 (8%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
L+ +L GQ +H +K+ VF+ LI Y C L A VF + E++
Sbjct: 137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKD 196
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHS 211
VVSW +MI+ + Q+G +AL LF +M + + T V S GRQ+ S
Sbjct: 197 VVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCS 256
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL----------------------- 248
I ++ + ++ + +++LDMY K G I +A+ +F+ +
Sbjct: 257 YIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEA 316
Query: 249 --------PERDVVSCTAIISGYAQLGLDEEALDLFRQLR-GEGMQSNYVTYASVLTALS 299
P++D+V+ A+IS Y Q G EAL +F +L+ + M+ N +T S L+A +
Sbjct: 317 AREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACA 376
Query: 300 GLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNA 359
+ +L+ G+ +H+++ + + + ++LI MYSKCG+L SR +F+++++R V W+A
Sbjct: 377 QVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSA 436
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG 419
M+ G HG G E +++F M+E N VKP+GVT V CSH GL D +F+ M S
Sbjct: 437 MIGGLAMHGCGNEAVDMFYKMQEAN-VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESN 495
Query: 420 KIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGV 479
G+ P+++HY C+VD+LGR+G +E+A +FI+ MP P+ ++WG+LLGAC +H+N+++
Sbjct: 496 -YGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAE 554
Query: 480 FVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVL 530
RLLE+E N G + LS +V LR M + KEPG S IE+D ++
Sbjct: 555 MACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMI 614
Query: 531 HTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQ-KEKILLGHSEKL 589
H F + D +HP E+VY K+ E+ + K GY P++S VL ++EE+ KE+ L HSEKL
Sbjct: 615 HEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKL 674
Query: 590 ALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSC 649
A+ +GLIST IRVIKNLR+C DCH+ AK IS++Y RE+ +RD+ RFH G+CSC
Sbjct: 675 AICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSC 734
Query: 650 GDYW 653
D+W
Sbjct: 735 NDFW 738
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 228/441 (51%), Gaps = 48/441 (10%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVL--YTKCDSLRDARHVFDEMP 156
+L+ CVS LR+ ++ H HMI+T + ++L + + SL AR VFDE+P
Sbjct: 35 SLIERCVS---LRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP 91
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQML-RSGTEPNEFTF-------ATVXSM-LGR 207
+ N +W +I AY+ ++ F+ M+ S PN++TF A V S+ LG+
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
+H + +KS + V+V +SL+ Y G + A +F + E+DVVS ++I+G+ Q G
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
++AL+LF+++ E +++++VT VL+A + + +L+ G+QV +++ + V + L N
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQE-------------------------------RTVMS 356
+++DMY+KCG++ ++R+FD M+E + +++
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVA 331
Query: 357 WNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDM 416
WNA++ Y ++G+ E L +F ++ + +K + +T+++ LS C+ G + G I +
Sbjct: 332 WNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYI 391
Query: 417 TSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVD 476
K G+ ++ + + G +E++ E + + +W +++G ++H +
Sbjct: 392 K--KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHGCGN 448
Query: 477 IGVFVGHRLLEIETGNAGNYF 497
V + +++ E G F
Sbjct: 449 EAVDMFYKMQEANVKPNGVTF 469
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust.
Identities = 219/642 (34%), Positives = 357/642 (55%), Gaps = 91/642 (14%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER- 158
L C A + G+++H + F++ + +Y +C + DAR VFD M ++
Sbjct: 122 LFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKD 181
Query: 159 ----------------------------------NVVSWTAMISAYSQRGYASQALNLFV 184
N+VSW ++S +++ GY +A+ +F
Sbjct: 182 VVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQ 241
Query: 185 QMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDG 236
++ G P++ T ++V +GR IH +IK V S+++DMY K G
Sbjct: 242 KIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSG 301
Query: 237 KIH-------------------------------EARGIFECLPER----DVVSCTAIIS 261
++ +A +FE E+ +VVS T+II+
Sbjct: 302 HVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIA 361
Query: 262 GYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPS 321
G AQ G D EAL+LFR+++ G++ N+VT S+L A +A+L HG+ H +R +
Sbjct: 362 GCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD 421
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF-TLM 380
V + ++LIDMY+KCG + S+ +F+ M + ++ WN+++ G+ HG+ +EV+ +F +LM
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 381 REENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRA 440
R +KPD ++ ++LS C GL D G ++ M S + G++P+ EHY C+V+LLGRA
Sbjct: 482 R--TRLKPDFISFTSLLSACGQVGLTDEGWK-YFKMMSEEYGIKPRLEHYSCMVNLLGRA 538
Query: 441 GRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS 500
G+++EA++ IK+MPFEP + +WG+LL +C + +NVD+ +L +E N G Y LS
Sbjct: 539 GKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLS 598
Query: 501 ---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVK 551
+V S+R+ M + K PG S I++ ++T A D+SHP+ +++ K+
Sbjct: 599 NIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMD 658
Query: 552 ELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLR 611
E+S +++G+ P+L LHDV+E+++E++L GHSEKLA+ FGL++TP+G P++VIKNLR
Sbjct: 659 EISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLR 718
Query: 612 ICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
IC DCH K+IS GRE+ +RD NRFH G CSCGD+W
Sbjct: 719 ICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 172/355 (48%), Gaps = 46/355 (12%)
Query: 115 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRG 174
+ HA ++K+ ++ +LI Y+ + DA V +P+ + S++++I A ++
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 175 YASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGS 226
+Q++ +F +M G P+ + + +G+QIH + S D +V
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 227 SLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS 286
S+ MY + G++ +AR +F+ + ++DVV+C+A++ YA+ G EE + + ++ G+++
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 287 NYVTY-----------------------------------ASVLTALSGLASLDHGKQVH 311
N V++ +SVL ++ L+ G+ +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 312 NHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGR 371
+V++ + + +++IDMY K G++ +F+ + NA + G ++G
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 372 EVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPK 426
+ LE+F L +E+ ++ + V+ ++++GC+ G + L++F +M GV+P
Sbjct: 336 KALEMFELFKEQT-MELNVVSWTSIIAGCAQNGKDIEALELFREMQVA--GVKPN 387
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 63/109 (57%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L C + AL G+ H ++ L +V + + LI +Y KC + ++ VF+ MP +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR 207
N+V W ++++ +S G A + +++F ++R+ +P+ +F ++ S G+
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 411 bits (1057), Expect = e-115, Method: Compositional matrix adjust.
Identities = 202/525 (38%), Positives = 329/525 (62%), Gaps = 20/525 (3%)
Query: 148 ARHVFDEMPER-NVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFA----TV 201
A VF ++ + NV W +I Y++ G + A +L+ +M SG EP+ T+ V
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 202 XSM----LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCT 257
+M LG IHS++I+S + + +YV +SLL +YA G + A +F+ +PE+D+V+
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 258 AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
++I+G+A+ G EEAL L+ ++ +G++ + T S+L+A + + +L GK+VH ++++
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF 377
+ + N L+D+Y++CG + ++ +FD M ++ +SW +++VG +G G+E +ELF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
M + P +T + +L CSH G+ G + F M + +EP+ EH+GC+VDLL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE-EYKIEPRIEHFGCMVDLL 370
Query: 438 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYF 497
RAG+V++A+E+IK MP +P IW +LLGAC+VH + D+ F ++L++E ++G+Y
Sbjct: 371 ARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYV 430
Query: 498 FLS---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYI 548
LS DV+ +R ML+ V K PG S +E+ +H F D+SHP+ + +Y
Sbjct: 431 LLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYA 490
Query: 549 KVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIK 608
K+KE++ R + GYVP +S V DV+EE+KE ++ HSEK+A++F LISTPE PI V+K
Sbjct: 491 KLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVK 550
Query: 609 NLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
NLR+C DCH K +SK+Y RE+ +RD++RFH G CSC DYW
Sbjct: 551 NLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 153/285 (53%), Gaps = 13/285 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y L+ + +R G+ +H+ +I++ + ++++ L+ LY C + A VFD+MP
Sbjct: 124 YPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMP 183
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQ 208
E+++V+W ++I+ +++ G +AL L+ +M G +P+ FT ++ S LG++
Sbjct: 184 EKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKR 243
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H +IK +++ + LLD+YA+ G++ EA+ +F+ + +++ VS T++I G A G
Sbjct: 244 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 303
Query: 269 DEEALDLFRQLRG-EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE--VPSYVVL 325
+EA++LF+ + EG+ +T+ +L A S + G + +R E + +
Sbjct: 304 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR-MREEYKIEPRIEH 362
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTM-QERTVMSWNAMLVGYGKHGE 369
++D+ ++ G + + +M + V+ W +L HG+
Sbjct: 363 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 407
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 227/600 (37%), Positives = 335/600 (55%), Gaps = 58/600 (9%)
Query: 109 ALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
AL EG +H K L F+ T + +Y C + AR+VFDEM R+VV+W MI
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ--------IHSLIIKSN--Y 218
Y + G +A LF +M S P+E + S GR I+ +I+++
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRM 245
Query: 219 DAHV-------YVGSSLLDM----------------------YAKDGKIHEARGIFECLP 249
D H+ Y G+ +DM Y+K G++ +A+ IF+
Sbjct: 246 DTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTE 305
Query: 250 ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQ 309
++D+V T +IS Y + +EAL +F ++ G++ + V+ SV++A + L LD K
Sbjct: 306 KKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKW 365
Query: 310 VHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE 369
VH+ + + + S + + N+LI+MY+KCG L +R +F+ M R V+SW++M+ HGE
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGE 425
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEH 429
+ L LF M++EN V+P+ VT + VL GCSH GL + G IF MT + + PK EH
Sbjct: 426 ASDALSLFARMKQEN-VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTD-EYNITPKLEH 483
Query: 430 YGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIE 489
YGC+VDL GRA + EA E I+ MP IWGSL+ AC +H +++G F R+LE+E
Sbjct: 484 YGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE 543
Query: 490 TGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSH 540
+ G +S DVR++R +M +K V KE G SRI+ + H F D+ H
Sbjct: 544 PDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRH 603
Query: 541 PRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPE 600
+ E+Y K+ E+ + K AGYVPD VL DV+EE+K+ ++L HSEKLAL FGL++ +
Sbjct: 604 KQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEK 663
Query: 601 -------GVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
GV IR++KNLR+C DCH F K +SK+Y RE+ +RD+ RFH G CSC DYW
Sbjct: 664 EEEKDSCGV-IRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 190/418 (45%), Gaps = 50/418 (11%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKT--RYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
N +L + ++L +++HAH+++T + + FL + + S A +VF +
Sbjct: 13 NTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSY--ALNVFSSI 70
Query: 156 PE-RNVVSWTAMISAYSQRGYASQALNLFVQMLRS-GTEPNEFTFATVXSML-------- 205
P + + + S R +A LF Q +R G ++F+F + +
Sbjct: 71 PSPPESIVFNPFLRDLS-RSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFE 129
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
G ++H + K +V + +DMYA G+I+ AR +F+ + RDVV+ +I Y +
Sbjct: 130 GMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCR 189
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
GL +EA LF +++ + + + ++++A ++ + + ++ ++ ++V L
Sbjct: 190 FGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHL 249
Query: 326 QNSLIDM-------------------------------YSKCGNLTYSRRIFDTMQERTV 354
+L+ M YSKCG L ++ IFD +++ +
Sbjct: 250 LTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDL 309
Query: 355 MSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFY 414
+ W M+ Y + +E L +F M +KPD V+M +V+S C++ G+ D+ +
Sbjct: 310 VCWTTMISAYVESDYPQEALRVFEEMCCSG-IKPDVVSMFSVISACANLGILDKAKWVHS 368
Query: 415 DMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+ G+E + ++++ + G ++ + +KMP + W S++ A S+H
Sbjct: 369 CIHVN--GLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS-WSSMINALSMH 423
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 153/342 (44%), Gaps = 46/342 (13%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+++ C +R + ++ +I+ L T L+ +Y + AR F +M RN
Sbjct: 218 IVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN 277
Query: 160 VVSWTAMISAYSQRG-------------------------------YASQALNLFVQMLR 188
+ TAM+S YS+ G Y +AL +F +M
Sbjct: 278 LFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCC 337
Query: 189 SGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE 240
SG +P+ + +V S + +HS I + ++ + + ++L++MYAK G +
Sbjct: 338 SGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDA 397
Query: 241 ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSG 300
R +FE +P R+VVS +++I+ + G +AL LF +++ E ++ N VT+ VL S
Sbjct: 398 TRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSH 457
Query: 301 LASLDHGKQVHNHVLRS-EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWN 358
++ GK++ + + + ++D++ + L + + ++M V+ W
Sbjct: 458 SGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWG 517
Query: 359 AMLVGYGKHGEGREVLELFTLMREEN-EVKPDGVTMLAVLSG 399
+++ HGE LEL + E++PD L ++S
Sbjct: 518 SLMSACRIHGE----LELGKFAAKRILELEPDHDGALVLMSN 555
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 38/287 (13%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++++ C + L + + VH+ + + + LI +Y KC L R VF++MP R
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRR 408
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNY 218
NVVSW++MI+A S G AS AL+LF +M + EPNE TF V L HS +++
Sbjct: 409 NVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGV---LYGCSHSGLVEEGK 465
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQ 278
+ +S+ D Y P+ + C + G A L EAL++
Sbjct: 466 K----IFASMTDEY-------------NITPKLEHYGCMVDLFGRANLL--REALEVIES 506
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
+ + SN V + S+++A L+ GK +L E P + + ++Y++
Sbjct: 507 M---PVASNVVIWGSLMSACRIHGELELGKFAAKRILELE-PDHDGALVLMSNIYAREQR 562
Query: 339 LTYSRRIFDTMQERTVMSWNAM------------LVGYGKHGEGREV 373
R I M+E+ V + L+G +H + E+
Sbjct: 563 WEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEI 609
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/575 (37%), Positives = 337/575 (58%), Gaps = 20/575 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++ L + A + VH ++KT Y+ + L+ LYT+ + DA VF+EMP
Sbjct: 250 FDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMP 309
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX--------SMLGRQ 208
+ +VV W+ MI+ + Q G+ ++A++LF++M + PNEFT +++ S LG Q
Sbjct: 310 KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQ 369
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H L++K +D +YV ++L+D+YAK K+ A +F L ++ VS +I GY LG
Sbjct: 370 LHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGE 429
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+A +FR+ + VT++S L A + LAS+D G QVH +++ V + NS
Sbjct: 430 GGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS 489
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
LIDMY+KCG++ +++ +F+ M+ V SWNA++ GY HG GR+ L + +M++ + KP
Sbjct: 490 LIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR-DCKP 548
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
+G+T L VLSGCS+ GL D+G + F M G+EP EHY C+V LLGR+G++++A +
Sbjct: 549 NGLTFLGVLSGCSNAGLIDQGQECFESMIRDH-GIEPCLEHYTCMVRLLGRSGQLDKAMK 607
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS-------- 500
I+ +P+EP+ IW ++L A +N + +L+I + Y +S
Sbjct: 608 LIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQ 667
Query: 501 -XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
+V S+R M + V KEPG S IE +H F HP + + ++ L+++
Sbjct: 668 WANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATR 727
Query: 560 AGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVP-IRVIKNLRICVDCHN 618
AGYVPD + VL D+D+E+K+K L HSE+LAL++GL+ P I ++KNLRIC DCH+
Sbjct: 728 AGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKNLRICSDCHS 787
Query: 619 FAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
K IS I R++ +RD NRFH G CSCGD+W
Sbjct: 788 AMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 211/442 (47%), Gaps = 55/442 (12%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
Y A+L C+ K + +H ++K +F L+ Y K +DA ++FDEM
Sbjct: 51 AYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM 110
Query: 156 PERNVVSWTAMISAYSQRGYASQ-ALNLFVQMLRSGTEPNEFTFATVXSM--------LG 206
PERN VS+ + +GYA Q + L+ ++ R G E N F + + +
Sbjct: 111 PERNNVSFVTL-----AQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC 165
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
+HS I+K YD++ +VG++L++ Y+ G + AR +FE + +D+V I+S Y +
Sbjct: 166 PWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV-- 324
G E++L L +R G N T+ + L A GL + D K VH +L++ YV+
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKT---CYVLDP 282
Query: 325 -LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+ L+ +Y++ G+++ + ++F+ M + V+ W+ M+ + ++G E ++LF MRE
Sbjct: 283 RVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREA 342
Query: 384 NEVKPDGVTMLAVLSGCS-----------HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
V P+ T+ ++L+GC+ HG + G D+ +++ I V K E
Sbjct: 343 -FVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 433 VVDL---------------------LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSV 471
V L LG G+ F + T + S LGAC+
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 472 HSNVDIGVFVGHRLLEIETGNA 493
+++D+GV V L I+T NA
Sbjct: 462 LASMDLGVQV--HGLAIKTNNA 481
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 221/598 (36%), Positives = 340/598 (56%), Gaps = 30/598 (5%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L M L G + +++ + C L G+++H+ I++ + V L+ +Y K
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAK 314
Query: 142 CD---SLRDARHVFDEMPERNVVSWTAMISAYSQR-GYASQALNLFVQMLRSG-TEPNEF 196
C S+ D R VFD M + +V+SWTA+I+ Y + A++A+NLF +M+ G EPN F
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 197 TFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL 248
TF++ +G+Q+ K ++ V +S++ M+ K ++ +A+ FE L
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 249 PERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGK 308
E+++VS + G + E+A L ++ + + T+AS+L+ ++ + S+ G+
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 309 QVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHG 368
Q+H+ V++ + + N+LI MYSKCG++ + R+F+ M+ R V+SW +M+ G+ KHG
Sbjct: 495 QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHG 554
Query: 369 EGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKE 428
VLE F M EE VKP+ VT +A+LS CSH GL G F M ++PK E
Sbjct: 555 FAIRVLETFNQMIEEG-VKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDH-KIKPKME 612
Query: 429 HYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEI 488
HY C+VDLL RAG + +AFEFI MPF+ +W + LGAC VHSN ++G ++LE+
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672
Query: 489 ETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRS 539
+ Y LS + +R M ++ ++KE G S IE+ +H F+ D +
Sbjct: 673 DPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTA 732
Query: 540 HPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKE----KILLGHSEKLALSFGL 595
HP ++Y ++ L K GYVPD VLH ++EE E ++L HSEK+A++FGL
Sbjct: 733 HPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGL 792
Query: 596 ISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
IST + P+RV KNLR+C DCHN KYIS + GRE+ LRD NRFH GKCSC DYW
Sbjct: 793 ISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 192/367 (52%), Gaps = 21/367 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM- 155
+++LL C+ R R G+ VHA +I+ P L LI LY+K A VF+ M
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 156 --PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------L 205
+R+VVSW+AM++ Y G A+ +FV+ L G PN++ + V +
Sbjct: 125 RFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGV 184
Query: 206 GRQIHSLIIKS-NYDAHVYVGSSLLDMYAK-DGKIHEARGIFECLPERDVVSCTAIISGY 263
GR ++K+ ++++ V VG SL+DM+ K + A +F+ + E +VV+ T +I+
Sbjct: 185 GRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRC 244
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
Q+G EA+ F + G +S+ T +SV +A + L +L GKQ+H+ +RS + V
Sbjct: 245 MQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV 304
Query: 324 VLQNSLIDMYSKC---GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE-GREVLELFTL 379
+ SL+DMY+KC G++ R++FD M++ +VMSW A++ GY K+ E + LF+
Sbjct: 305 --ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSE 362
Query: 380 MREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGR 439
M + V+P+ T + C G L D + + K G+ V+ + +
Sbjct: 363 MITQGHVEPNHFTFSSAFKAC--GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVK 420
Query: 440 AGRVEEA 446
+ R+E+A
Sbjct: 421 SDRMEDA 427
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 200/391 (51%), Gaps = 21/391 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPS-VFLRTRLIVLYTKC-DSLRDARHVFDE 154
Y A++ C + + G+ ++KT + S V + LI ++ K +S +A VFD+
Sbjct: 169 YTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDK 228
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LG 206
M E NVV+WT MI+ Q G+ +A+ F+ M+ SG E ++FT ++V S LG
Sbjct: 229 MSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLG 288
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAK---DGKIHEARGIFECLPERDVVSCTAIISGY 263
+Q+HS I+S V SL+DMYAK DG + + R +F+ + + V+S TA+I+GY
Sbjct: 289 KQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGY 346
Query: 264 AQ-LGLDEEALDLFRQLRGEG-MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPS 321
+ L EA++LF ++ +G ++ N+ T++S A L+ GKQV + + S
Sbjct: 347 MKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS 406
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMR 381
+ NS+I M+ K + ++R F+++ E+ ++S+N L G ++ + +L + +
Sbjct: 407 NSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEIT 466
Query: 382 EENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAG 441
E E+ T ++LSG ++ G +G I + K+G+ + ++ + + G
Sbjct: 467 ER-ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV--KLGLSCNQPVCNALISMYSKCG 523
Query: 442 RVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
++ A M + W S++ + H
Sbjct: 524 SIDTASRVFNFMENRNVIS-WTSMITGFAKH 553
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 23/209 (11%)
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
ALDL + M S VT++S+L + GK VH ++ ++ VL NSLI
Sbjct: 48 ALDLMARDGIRPMDS--VTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLIS 105
Query: 332 MYSKCGNLTYSRRIFDTMQ---ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
+YSK G+ + +F+TM+ +R V+SW+AM+ YG +G + +++F E V P
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLV-P 164
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY------GC-VVDLLGRA- 440
+ AV+ CS+ F + +G K H+ GC ++D+ +
Sbjct: 165 NDYCYTAVIRACSNSD--------FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGE 216
Query: 441 GRVEEAFEFIKKMPFEPTAAIWGSLLGAC 469
E A++ KM E W ++ C
Sbjct: 217 NSFENAYKVFDKMS-ELNVVTWTLMITRC 244
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 400 bits (1029), Expect = e-111, Method: Compositional matrix adjust.
Identities = 211/590 (35%), Positives = 336/590 (56%), Gaps = 20/590 (3%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
+QM + G ++ ++ C R + G+ VH+ +K + L+ +Y+K
Sbjct: 284 FVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSK 343
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
C L A+ VF EM +R+VVS+T+MI+ Y++ G A +A+ LF +M G P+ +T V
Sbjct: 344 CGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAV 403
Query: 202 XSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
+ G+++H I +++ ++V ++L+DMYAK G + EA +F + +D+
Sbjct: 404 LNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI 463
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS-NYVTYASVLTALSGLASLDHGKQVHN 312
+S II GY++ EAL LF L E S + T A VL A + L++ D G+++H
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHG 523
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
+++R+ S + NSL+DMY+KCG L + +FD + + ++SW M+ GYG HG G+E
Sbjct: 524 YIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKE 583
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
+ LF MR+ ++ D ++ +++L CSH GL D G F+++ + +EP EHY C
Sbjct: 584 AIALFNQMRQAG-IEADEISFVSLLYACSHSGLVDEGWR-FFNIMRHECKIEPTVEHYAC 641
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
+VD+L R G + +A+ FI+ MP P A IWG+LL C +H +V + V ++ E+E N
Sbjct: 642 IVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPEN 701
Query: 493 AGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRR 543
G Y ++ V+ LR + ++ + K PG S IE+ ++ F A D S+P
Sbjct: 702 TGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPET 761
Query: 544 EEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVP 603
E + ++++ R E GY P L D +E +KE+ L GHSEKLA++ G+IS+ G
Sbjct: 762 ENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGHGKI 821
Query: 604 IRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
IRV KNLR+C DCH AK++SK+ RE+ LRD NRFHQ G CSC +W
Sbjct: 822 IRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 188/330 (56%), Gaps = 14/330 (4%)
Query: 104 CVSK-----RALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
CVSK R++ G+++H ++K+ + + L+ Y K + AR VFDEM ER
Sbjct: 200 CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER 259
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIH 210
+V+SW ++I+ Y G A + L++FVQML SG E + T +V + LGR +H
Sbjct: 260 DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVH 319
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
S+ +K+ + ++LLDMY+K G + A+ +F + +R VVS T++I+GYA+ GL
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG 379
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
EA+ LF ++ EG+ + T +VL + LD GK+VH + +++ + + N+L+
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALM 439
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
DMY+KCG++ + +F M+ + ++SWN ++ GY K+ E L LF L+ EE PD
Sbjct: 440 DMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDE 499
Query: 391 VTMLAVLSGCSHGGLEDRGLDIF-YDMTSG 419
T+ VL C+ D+G +I Y M +G
Sbjct: 500 RTVACVLPACASLSAFDKGREIHGYIMRNG 529
Score = 189 bits (480), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 210/397 (52%), Gaps = 12/397 (3%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L C ++L++G+ V + ++ L ++L ++YT C L++A VFDE+
Sbjct: 99 SVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE 158
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIH 210
+ W +++ ++ G S ++ LF +M+ SG E + +TF+ V G Q+H
Sbjct: 159 KALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLH 218
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
I+KS + VG+SL+ Y K+ ++ AR +F+ + ERDV+S +II+GY GL E
Sbjct: 219 GFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAE 278
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
+ L +F Q+ G++ + T SV + + G+ VH+ +++ N+L+
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
DMYSKCG+L ++ +F M +R+V+S+ +M+ GY + G E ++LF M EE + PD
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEG-ISPDV 397
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
T+ AVL+ C+ L D G + + +G + + ++D+ + G ++EA
Sbjct: 398 YTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALMDMYAKCGSMQEAELVF 455
Query: 451 KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
+M + + W +++G S + + + + + LLE
Sbjct: 456 SEMRVKDIIS-WNTIIGGYSKNCYANEALSLFNLLLE 491
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 185/432 (42%), Gaps = 54/432 (12%)
Query: 131 LRTRLIVLYTKCDSLRDARHVFDEMP--ERNVVSWTAMISAYSQRGYASQALNLFVQMLR 188
+R R V++ + SLR D + +R+V + + + G A+ L +
Sbjct: 31 VRVRKYVIFNRA-SLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGK 89
Query: 189 SGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE 240
+P T +V + G+++ + I + + +GS L MY G + E
Sbjct: 90 WDIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKE 147
Query: 241 ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSG 300
A +F+ + + +++ A+ G ++ LF+++ G++ + T++ V + S
Sbjct: 148 ASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSS 207
Query: 301 LASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAM 360
L S+ G+Q+H +L+S + NSL+ Y K + +R++FD M ER V+SWN++
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 361 LVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL--------------- 405
+ GY +G + L +F M ++ D T+++V +GC+ L
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSG-IEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 406 ---EDRGLDIFYDMTSGKIGVEPKKE-----------HYGCVVDLLGRAGRVEEAFEFIK 451
EDR + DM S ++ K Y ++ R G EA + +
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 452 KMPFE---PTAAIWGSLLGACSVHSNVDIGVFVGHRLLE-IETGNAGNYFFLSXDVRSLR 507
+M E P ++L C+ + +D G R+ E I+ + G F+S +L
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLD----EGKRVHEWIKENDLGFDIFVS---NALM 439
Query: 508 DMMLKKAVMKEP 519
DM K M+E
Sbjct: 440 DMYAKCGSMQEA 451
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 400 bits (1028), Expect = e-111, Method: Compositional matrix adjust.
Identities = 221/575 (38%), Positives = 334/575 (58%), Gaps = 23/575 (4%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
L+ C S + + GQ++H +K +V + L+ LY + L + R +F MPE +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQ 481
Query: 161 VSWTAMISAYSQRGYA-SQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHS 211
VSW ++I A ++ + +A+ F+ R+G + N TF++V S LG+QIH
Sbjct: 482 VSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHG 541
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER-DVVSCTAIISGYAQLGLDE 270
L +K+N ++L+ Y K G++ IF + ER D V+ ++ISGY L
Sbjct: 542 LALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLA 601
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
+ALDL + G + + YA+VL+A + +A+L+ G +VH +R+ + S VV+ ++L+
Sbjct: 602 KALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALV 661
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
DMYSKCG L Y+ R F+TM R SWN+M+ GY +HG+G E L+LF M+ + + PD
Sbjct: 662 DMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDH 721
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
VT + VLS CSH GL + G F M S G+ P+ EH+ C+ D+LGRAG +++ +FI
Sbjct: 722 VTFVGVLSACSHAGLLEEGFKHFESM-SDSYGLAPRIEHFSCMADVLGRAGELDKLEDFI 780
Query: 451 KKMPFEPTAAIWGSLLGACSVHS--NVDIGVFVGHRLLEIETGNAGNYFFLSX------- 501
+KMP +P IW ++LGAC + ++G L ++E NA NY L
Sbjct: 781 EKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGR 840
Query: 502 --DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
D+ R M V KE G S + + +H F A D+SHP + +Y K+KEL+ + ++
Sbjct: 841 WEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Query: 560 AGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIST-PEGVPIRVIKNLRICVDCHN 618
AGYVP L+D+++E KE+IL HSEKLA++F L + +PIR++KNLR+C DCH+
Sbjct: 901 AGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHS 960
Query: 619 FAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
KYISKI GR++ LRD NRFH G CSC D+W
Sbjct: 961 AFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 190/375 (50%), Gaps = 15/375 (4%)
Query: 109 ALREGQRVHAHMIKTRYLP-SVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMI 167
L++G+ VH H+I T + V + L+ +Y KC S+ DAR VF M +++ VSW +MI
Sbjct: 328 GLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 168 SAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYD 219
+ Q G +A+ + M R P FT + S LG+QIH +K D
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGID 447
Query: 220 AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD-EEALDLFRQ 278
+V V ++L+ +YA+ G ++E R IF +PE D VS +II A+ EA+ F
Sbjct: 448 LNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLN 507
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
+ G + N +T++SVL+A+S L+ + GKQ+H L++ + +N+LI Y KCG
Sbjct: 508 AQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGE 567
Query: 339 LTYSRRIFDTMQE-RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
+ +IF M E R ++WN+M+ GY + + L+L M + + + D VL
Sbjct: 568 MDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ-RLDSFMYATVL 626
Query: 398 SGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEP 457
S + +RG+++ S + +E +VD+ + GR++ A F MP
Sbjct: 627 SAFASVATLERGMEV--HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 458 TAAIWGSLLGACSVH 472
+ + W S++ + H
Sbjct: 685 SYS-WNSMISGYARH 698
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 15/309 (4%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
+ + CV R + H+ + K R V+L LI Y + AR VFDEMP R
Sbjct: 8 SFVQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS----------MLGRQ 208
N VSW ++S YS+ G +AL M++ G N++ F +V + GRQ
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAK-DGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
IH L+ K +Y V + L+ MY K G + A F + ++ VS +IIS Y+Q G
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG--KQVHNHVLRSEVPSYVVL 325
A +F ++ +G + T+ S++T L D +Q+ + +S + + + +
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
+ L+ ++K G+L+Y+R++F+ M+ R ++ N ++VG + G E +LF M +
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMID 305
Query: 386 VKPDGVTML 394
V P+ +L
Sbjct: 306 VSPESYVIL 314
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 136/262 (51%), Gaps = 15/262 (5%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+++ + K+ L +F+ + L+ + K SL AR VF++M RN V+ ++ ++
Sbjct: 228 EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQ 287
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSML-------------GRQIHSLIIKSNY-D 219
+ +A LF+ M S + + ++ + S GR++H +I + D
Sbjct: 288 KWGEEATKLFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 220 AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
V +G+ L++MYAK G I +AR +F + ++D VS ++I+G Q G EA++ ++ +
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 280 RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNL 339
R + T S L++ + L G+Q+H L+ + V + N+L+ +Y++ G L
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYL 466
Query: 340 TYSRRIFDTMQERTVMSWNAML 361
R+IF +M E +SWN+++
Sbjct: 467 NECRKIFSSMPEHDQVSWNSII 488
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 104/199 (52%), Gaps = 3/199 (1%)
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
R HS + K+ D VY+ ++L++ Y + G AR +F+ +P R+ VS I+SGY++
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLD--HGKQVHNHVLRSEVPSYV 323
G +EAL R + EG+ SN + SVL A + S+ G+Q+H + +
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA 139
Query: 324 VLQNSLIDMYSKC-GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
V+ N LI MY KC G++ Y+ F ++ + +SWN+++ Y + G+ R +F+ M+
Sbjct: 140 VVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQY 199
Query: 383 ENEVKPDGVTMLAVLSGCS 401
+ + V + CS
Sbjct: 200 DGSRPTEYTFGSLVTTACS 218
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +L+ S L G VHA ++ V + + L+ +Y+KC L A F+ MP
Sbjct: 622 YATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMP 681
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXS 203
RN SW +MIS Y++ G +AL LF M G T P+ TF V S
Sbjct: 682 VRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/539 (40%), Positives = 306/539 (56%), Gaps = 25/539 (4%)
Query: 132 RTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGT 191
RT +I K + +AR +FDEM ER+V++WT M++ Y Q A +F M
Sbjct: 175 RTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVM----- 229
Query: 192 EPNEFTFATVXSMLGRQIHSLIIKSNYD-------AHVYVGSSLLDMYAKDGKIHEARGI 244
E T + SML + + I+ + V ++++ + G+I +AR +
Sbjct: 230 --PEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRV 287
Query: 245 FECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASL 304
F+ + ER+ S +I + + G + EALDLF ++ +G++ + T S+L+ + LASL
Sbjct: 288 FDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASL 347
Query: 305 DHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGY 364
HGKQVH ++R + V + + L+ MY KCG L S+ IFD + ++ WN+++ GY
Sbjct: 348 HHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGY 407
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVE 424
HG G E L++F M KP+ VT +A LS CS+ G+ + GL I+ M S GV+
Sbjct: 408 ASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES-VFGVK 466
Query: 425 PKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHR 484
P HY C+VD+LGRAGR EA E I M EP AA+WGSLLGAC HS +D+ F +
Sbjct: 467 PITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKK 526
Query: 485 LLEIETGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTF-H 534
L+EIE N+G Y LS DV LR +M + V K PG S E++ +H F
Sbjct: 527 LIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTR 586
Query: 535 ASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFG 594
SHP +E + + EL +EAGY PD S LHDVDEE+K L HSE+LA+++
Sbjct: 587 GGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYA 646
Query: 595 LISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
L+ EG+PIRV+KNLR+C DCH K ISK+ RE+ LRD NRFH G+CSC DYW
Sbjct: 647 LLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 146/276 (52%), Gaps = 27/276 (9%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPN 194
L+ Y K + +AR VFD MPERNVVSWTA++ Y G A +LF +M E N
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM----PEKN 140
Query: 195 EFTFATVXSML---GR-----QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE 246
+ ++ + GR +++ +I + A +S++ K+G++ EAR IF+
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIAR----TSMIHGLCKEGRVDEAREIFD 196
Query: 247 CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH 306
+ ER V++ T +++GY Q ++A +F + + V++ S+L + + +
Sbjct: 197 EMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSML-----MGYVQN 247
Query: 307 GKQVHNHVLRSEVP-SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYG 365
G+ L +P V+ N++I + G + +RR+FD+M+ER SW ++ +
Sbjct: 248 GRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHE 307
Query: 366 KHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
++G E L+LF LM+++ V+P T++++LS C+
Sbjct: 308 RNGFELEALDLFILMQKQG-VRPTFPTLISILSVCA 342
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 145/329 (44%), Gaps = 55/329 (16%)
Query: 140 TKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
++ + +AR +FD +++ SW +M++ Y A LF +M
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEM------------- 74
Query: 200 TVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI 259
D ++ + L+ Y K+G+I EAR +F+ +PER+VVS TA+
Sbjct: 75 ------------------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTAL 116
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
+ GY G + A LF ++ + N V++ +L +D +++ + +
Sbjct: 117 VKGYVHNGKVDVAESLFWKMP----EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD- 171
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTL 379
+ + S+I K G + +R IFD M ER+V++W M+ GYG++ + ++F +
Sbjct: 172 ---NIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 380 MREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC--VVDLL 437
M E+ E V+ ++L G G + ++F M P K C ++ L
Sbjct: 229 MPEKTE-----VSWTSMLMGYVQNGRIEDAEELFEVM--------PVKPVIACNAMISGL 275
Query: 438 GRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
G+ G + +A M E A W +++
Sbjct: 276 GQKGEIAKARRVFDSMK-ERNDASWQTVI 303
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 121/266 (45%), Gaps = 35/266 (13%)
Query: 94 FKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFD 153
F ++L+ C S +L G++VHA +++ ++ V++ + L+ +Y KC L ++ +FD
Sbjct: 331 FPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFD 390
Query: 154 EMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXSMLGRQIHSL 212
P ++++ W ++IS Y+ G +AL +F +M SG T+PNE TF S
Sbjct: 391 RFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLS--------- 441
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEA-RGIFECLPERDVVSCTAIISGYAQLGLDEE 271
A Y G M + KI+E+ +F P +C + G A G E
Sbjct: 442 -------ACSYAG-----MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRA--GRFNE 487
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP---SYVVLQNS 328
A+++ + ++ + + S+L A + LD + ++ E +Y++L N
Sbjct: 488 AMEMIDSMT---VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSN- 543
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTV 354
MY+ G + M+ R V
Sbjct: 544 ---MYASQGRWADVAELRKLMKTRLV 566
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 101/241 (41%), Gaps = 51/241 (21%)
Query: 236 GKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL 295
GKIHEAR +F+ + + S ++++GY + +A LF ++ N +++
Sbjct: 31 GKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMP----DRNIISW---- 82
Query: 296 TALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM 355
N L+ Y K G + +R++FD M ER V+
Sbjct: 83 -------------------------------NGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 356 SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
SW A++ GY +G+ LF M E+N+ V+ +L G G D + Y+
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNK-----VSWTVMLIGFLQDGRIDDACKL-YE 165
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNV 475
M K + +G L + GRV+EA E +M E + W +++ ++ V
Sbjct: 166 MIPDKDNIARTSMIHG-----LCKEGRVDEAREIFDEMS-ERSVITWTTMVTGYGQNNRV 219
Query: 476 D 476
D
Sbjct: 220 D 220
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 19/177 (10%)
Query: 295 LTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV 354
+T LS + + +++ + + S+ NS++ Y +R++FD M +R +
Sbjct: 24 ITHLSRIGKIHEARKLFDSCDSKSISSW----NSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 355 MSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFY 414
+SWN ++ GY K+GE E ++F LM E N V+ A++ G H G D +F+
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNV-----VSWTALVKGYVHNGKVDVAESLFW 134
Query: 415 DMTSGKIGVEPKKEHYGCVVDLLG--RAGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 469
M P+K V L+G + GR+++A + + +P + A + G C
Sbjct: 135 KM--------PEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLC 183
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 212/594 (35%), Positives = 340/594 (57%), Gaps = 49/594 (8%)
Query: 108 RALREGQRVHAHMIKTRYL--PSV-FLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWT 164
+++ E ++HA +++ L P L +L Y +R + +F + + ++ +T
Sbjct: 40 QSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFT 99
Query: 165 AMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV----XSMLGRQIHSLIIKSNYDA 220
A I+ S G QA L+VQ+L S PNEFTF+++ + G+ IH+ ++K
Sbjct: 100 AAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKFGLGI 159
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIIS------------------- 261
YV + L+D+YAK G + A+ +F+ +PER +VS TA+I+
Sbjct: 160 DPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC 219
Query: 262 ------------GYAQLGLDEEALDLFRQLRGEGM-QSNYVTYASVLTALSGLASLDHGK 308
GYAQ G +AL LF++L EG + + +T + L+A S + +L+ G+
Sbjct: 220 ERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGR 279
Query: 309 QVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHG 368
+H V S + V + LIDMYSKCG+L + +F+ + +++WNAM+ GY HG
Sbjct: 280 WIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHG 339
Query: 369 EGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKE 428
++ L LF M+ ++P +T + L C+H GL + G+ IF M + G++PK E
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQ-EYGIKPKIE 398
Query: 429 HYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEI 488
HYGC+V LLGRAG+++ A+E IK M + + +W S+LG+C +H + +G + L+ +
Sbjct: 399 HYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGL 458
Query: 489 ETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRS 539
N+G Y LS V +R++M +K ++KEPG S IE++ +H F A DR
Sbjct: 459 NIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDRE 518
Query: 540 HPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTP 599
H + +E+Y ++++S R K GYVP+ + VL D++E +KE+ L HSE+LA+++GLIST
Sbjct: 519 HSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTK 578
Query: 600 EGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
G P+++ KNLR+C DCH K ISKI GR++ +RD+NRFH G CSCGD+W
Sbjct: 579 PGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 159/341 (46%), Gaps = 64/341 (18%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+++LL C +K G+ +H H++K ++ T L+ +Y K + A+ VFD MP
Sbjct: 133 FSSLLKSCSTK----SGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 157 -------------------------------ERNVVSWTAMISAYSQRGYASQALNLFVQ 185
ER++VSW MI Y+Q G+ + AL LF +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 186 MLRSGT-EPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDG 236
+L G +P+E T S GR IH + S +V V + L+DMY+K G
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 237 KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG-EGMQSNYVTYASVL 295
+ EA +F P +D+V+ A+I+GYA G ++AL LF +++G G+Q +T+ L
Sbjct: 309 SLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL 368
Query: 296 TALSGLASLDHGKQV-----HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ 350
A + ++ G ++ + ++ ++ Y L+ + + G L +R ++T++
Sbjct: 369 QACAHAGLVNEGIRIFESMGQEYGIKPKIEHY----GCLVSLLGRAGQL---KRAYETIK 421
Query: 351 ERTVMS----WNAMLVGYGKHGE---GREVLELFTLMREEN 384
+ + W+++L HG+ G+E+ E + +N
Sbjct: 422 NMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 47/268 (17%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
A L+ C AL G+ +H + +R +V + T LI +Y+KC SL +A VF++ P +
Sbjct: 264 AALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK 323
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLR-SGTEPNEFTFATVXSMLGRQIHSLIIKSN 217
++V+W AMI+ Y+ GY+ AL LF +M +G +P + TF
Sbjct: 324 DIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITF------------------- 364
Query: 218 YDAHVYVGSSLLDMYAKDGKIHEARGIFECL-------PERDVVSCTAIISGYAQLGLDE 270
+G+ L A G ++E IFE + P+ + C + G A G +
Sbjct: 365 ------IGT--LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRA--GQLK 414
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPS---YVVLQN 327
A + ++ M ++ V ++SVL + GK++ +++ + + YV+L N
Sbjct: 415 RA---YETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSN 471
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVM 355
+Y+ G+ ++ + M+E+ ++
Sbjct: 472 ----IYASVGDYEGVAKVRNLMKEKGIV 495
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 397 bits (1020), Expect = e-110, Method: Compositional matrix adjust.
Identities = 228/626 (36%), Positives = 347/626 (55%), Gaps = 70/626 (11%)
Query: 92 MKFKGYNALLNECVSKRALREGQRVHAHMIKT--RYLPSVFLRTRLIVLYTKCDSLRDAR 149
+ ++ LL C + LR G+ +HA + + + P +L L Y + A+
Sbjct: 4 LSYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQ 63
Query: 150 HVFDEMP--ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--- 204
+FDE+P E++ V WT ++S++S+ G ++ LFV+M R E ++ + + +
Sbjct: 64 KLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAK 123
Query: 205 -----LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL----------- 248
+Q H + +K V V ++L+DMY K G + E + IFE L
Sbjct: 124 LEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVV 183
Query: 249 --------------------PERDVVSCTAIISGYAQLGLDEEALDLFRQLR---GEGMQ 285
PER+ V+ T +++GY G E L+L ++ G G+
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL- 242
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV-----PSY--VVLQNSLIDMYSKCGN 338
N+VT S+L+A + +L G+ VH + L+ E+ SY V++ +L+DMY+KCGN
Sbjct: 243 -NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGN 301
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLS 398
+ S +F M++R V++WNA+ G HG+GR V+++F M EVKPD +T AVLS
Sbjct: 302 IDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMI--REVKPDDLTFTAVLS 359
Query: 399 GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPT 458
CSH G+ D G F+ + G+EPK +HY C+VDLLGRAG +EEA +++MP P
Sbjct: 360 ACSHSGIVDEGWRCFHSLRF--YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPN 417
Query: 459 AAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS----XDVRS-----LRDM 509
+ GSLLG+CSVH V+I + L+++ GN +S + RS LR
Sbjct: 418 EVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGS 477
Query: 510 MLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCV 569
+ K+ + K PG S I ++ +H F + DRSHPR +E+Y+K+ E+ R + AGYVPD+S +
Sbjct: 478 LRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGL 537
Query: 570 LH--DVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIY 627
+ + D E+KE+ L HSEKLA+ FGL+ T P+ V KNLRIC DCH+ K +SK+Y
Sbjct: 538 VSHSEGDLEEKEQALCCHSEKLAVCFGLLETKPSTPLLVFKNLRICRDCHSAMKIVSKVY 597
Query: 628 GREVSLRDKNRFHQIVGGKCSCGDYW 653
RE+ +RD+NRFHQ GG CSC DYW
Sbjct: 598 DREIIIRDRNRFHQFKGGSCSCSDYW 623
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 119/274 (43%), Gaps = 35/274 (12%)
Query: 88 CGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYL-------PSVFLRTRLIVLYT 140
CGH + F ++L+ C L G+ VH + +K + V + T L+ +Y
Sbjct: 238 CGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYA 297
Query: 141 KCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFAT 200
KC ++ + +VF M +RNVV+W A+ S + G +++F QM+R +P++ TF
Sbjct: 298 KCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTA 356
Query: 201 VXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
V S HS I+ + H R + P+ D +C +
Sbjct: 357 VLSACS---HSGIVDEGWRC-----------------FHSLR-FYGLEPKVDHYACMVDL 395
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP 320
G A GL EEA L R++ + N V S+L + S ++ +++ +++ P
Sbjct: 396 LGRA--GLIEEAEILMREM---PVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMS-P 449
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV 354
Q + +MY G + + ++++R +
Sbjct: 450 GNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGI 483
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 394 bits (1013), Expect = e-110, Method: Compositional matrix adjust.
Identities = 211/590 (35%), Positives = 334/590 (56%), Gaps = 21/590 (3%)
Query: 83 LQMALCGHDMKFKGYN--ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYT 140
L +++ H + G+ +L C + + G +H+ ++K + V T L+ +Y+
Sbjct: 98 LFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYS 157
Query: 141 KCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFAT 200
L DA +FDE+P+R+VV+WTA+ S Y+ G +A++LF +M+ G +P+ +
Sbjct: 158 GSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQ 217
Query: 201 VXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERD 252
V S G I + + + +V ++L+++YAK GK+ +AR +F+ + E+D
Sbjct: 218 VLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKD 277
Query: 253 VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN 312
+V+ + +I GYA +E ++LF Q+ E ++ + + L++ + L +LD G+ +
Sbjct: 278 IVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGIS 337
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
+ R E + + + N+LIDMY+KCG + +F M+E+ ++ NA + G K+G +
Sbjct: 338 LIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKL 397
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
+F E+ + PDG T L +L GC H GL GL F++ S ++ EHYGC
Sbjct: 398 SFAVFG-QTEKLGISPDGSTFLGLLCGCVHAGLIQDGLR-FFNAISCVYALKRTVEHYGC 455
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
+VDL GRAG +++A+ I MP P A +WG+LL C + + + V L+ +E N
Sbjct: 456 MVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWN 515
Query: 493 AGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRR 543
AGNY LS + +RDMM KK + K PG S IEL+ +H F A D+SHP
Sbjct: 516 AGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLS 575
Query: 544 EEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVP 603
+++Y K+++L + G+VP V DV+EE+KE++L HSEKLA++ GLIST G
Sbjct: 576 DKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQV 635
Query: 604 IRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
IRV+KNLR+C DCH K ISKI RE+ +RD NRFH G CSC DYW
Sbjct: 636 IRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 192/382 (50%), Gaps = 33/382 (8%)
Query: 116 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGY 175
++ H+ +L ++ L+ L TK L +F N+ + ++I+ +
Sbjct: 37 INHHLHHDTFLVNLLLKRTLFFRQTKYSYL-----LFSHTQFPNIFLYNSLINGFVNNHL 91
Query: 176 ASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSS 227
+ L+LF+ + + G + FTF V LG +HSL++K ++ V +S
Sbjct: 92 FHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTS 151
Query: 228 LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSN 287
LL +Y+ G++++A +F+ +P+R VV+ TA+ SGY G EA+DLF+++ G++ +
Sbjct: 152 LLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPD 211
Query: 288 YVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
VL+A + LD G+ + ++ E+ ++ +L+++Y+KCG + +R +FD
Sbjct: 212 SYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFD 271
Query: 348 TMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLED 407
+M E+ +++W+ M+ GY + +E +ELF M +EN +KPD +++ LS C+ G
Sbjct: 272 SMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN-LKPDQFSIVGFLSSCASLG--- 327
Query: 408 RGLDIFYDMTSGKIGVEPKKEH--------YGCVVDLLGRAGRVEEAFEFIKKMPFEPTA 459
LD+ G+ G+ H ++D+ + G + FE K+M +
Sbjct: 328 -ALDL------GEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIV 380
Query: 460 AIWGSLLG-ACSVHSNVDIGVF 480
+ ++ G A + H + VF
Sbjct: 381 IMNAAISGLAKNGHVKLSFAVF 402
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/559 (36%), Positives = 320/559 (57%), Gaps = 19/559 (3%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G+++HA +K + VF+ +Y K DAR +FDE+PERN+ +W A IS
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYV 224
G +A+ F++ R PN TF + LG Q+H L+++S +D V V
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGM 284
+ L+D Y K +I + IF + ++ VS ++++ Y Q DE+A L+ + R + +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIV 306
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
+++ +SVL+A +G+A L+ G+ +H H +++ V + + ++L+DMY KCG + S +
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 345 IFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN-EVKPDGVTMLAVLSGCSHG 403
FD M E+ +++ N+++ GY G+ L LF M P+ +T +++LS CS
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 404 GLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWG 463
G + G+ IF M S G+EP EHY C+VD+LGRAG VE A+EFIKKMP +PT ++WG
Sbjct: 427 GAVENGMKIFDSMRS-TYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWG 485
Query: 464 SLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMMLKKA 514
+L AC +H +G+ L +++ ++GN+ LS + ++R+ +
Sbjct: 486 ALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVG 545
Query: 515 VMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVD 574
+ K G S I + +H F A DRSH +E+ + +L + AGY PDL L+D++
Sbjct: 546 IKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLE 605
Query: 575 EEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLR 634
EE+K + HSEKLAL+FGL+S P VPIR+ KNLRIC DCH+F K++S RE+ +R
Sbjct: 606 EEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVR 665
Query: 635 DKNRFHQIVGGKCSCGDYW 653
D NRFH+ G CSC DYW
Sbjct: 666 DNNRFHRFKDGICSCKDYW 684
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 132/406 (32%), Positives = 200/406 (49%), Gaps = 13/406 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKT-RYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
LL +S ++R G+ VHA ++KT P FL LI +Y+K D AR V P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA----TVXSM----LGRQIH 210
NVVSWT++IS +Q G+ S AL F +M R G PN+FTF V S+ G+QIH
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
+L +K V+VG S DMY K +AR +F+ +PER++ + A IS G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
EA++ F + R N +T+ + L A S L+ G Q+H VLRS + V + N LI
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
D Y KC + S IF M + +SW +++ Y ++ E + L+ L ++ V+
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY-LRSRKDIVETSD 310
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
+ +VLS C+ G+ L + K VE +VD+ G+ G +E++ +
Sbjct: 311 FMISSVLSACA--GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 451 KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNY 496
+MP E SL+G + VD+ + + + G NY
Sbjct: 369 DEMP-EKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNY 413
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 158/306 (51%), Gaps = 19/306 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ A LN C L G ++H ++++ + V + LI Y KC +R + +F EM
Sbjct: 212 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG 271
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
+N VSW ++++AY Q +A L+++ + E ++F ++V S LGR
Sbjct: 272 TKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRS 331
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH+ +K+ + ++VGS+L+DMY K G I ++ F+ +PE+++V+ ++I GYA G
Sbjct: 332 IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQ 391
Query: 269 DEEALDLFRQL--RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE--VPSYVV 324
+ AL LF ++ RG G NY+T+ S+L+A S ++++G ++ + +RS +
Sbjct: 392 VDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS-MRSTYGIEPGAE 450
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+ ++DM + G + + M + T+ W A+ HG+ + L+ E
Sbjct: 451 HYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQ-----LGLLAAE 505
Query: 384 NEVKPD 389
N K D
Sbjct: 506 NLFKLD 511
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/562 (36%), Positives = 328/562 (58%), Gaps = 21/562 (3%)
Query: 111 REGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAY 170
++ +++HA +++T + L T+L+ + AR VFDEM + + W + Y
Sbjct: 25 KQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 171 SQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHV 222
+ ++L L+ +M G P+EFT+ V + G +H+ ++K +
Sbjct: 85 VRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLG 144
Query: 223 YVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE 282
V + L+ MY K G++ A +FE + +D+V+ A ++ Q G AL+ F ++ +
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 283 GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYS 342
+Q + T S+L+A L SL+ G+++++ + E+ ++++N+ +DM+ KCGN +
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 343 RRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH 402
R +F+ M++R V+SW+ M+VGY +G+ RE L LFT M+ E ++P+ VT L VLS CSH
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEG-LRPNYVTFLGVLSACSH 323
Query: 403 GGLEDRGLDIFYDMT-SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAI 461
GL + G F M S +EP+KEHY C+VDLLGR+G +EEA+EFIKKMP EP I
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 462 WGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDVRS----------LRDMML 511
WG+LLGAC+VH ++ +G V L+E + G+Y L ++ + +R M
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVET-APDIGSYHVLLSNIYAAAGKWDCVDKVRSKMR 442
Query: 512 KKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLH 571
K K S +E + +H F+ D+SHP+ + +Y K+ E+ + ++ GYVPD V H
Sbjct: 443 KLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFH 502
Query: 572 DVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREV 631
DV+ E+KE L HSEKLA++FGLI G PIRV+KNLR C DCH F+K++S + E+
Sbjct: 503 DVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEI 562
Query: 632 SLRDKNRFHQIVGGKCSCGDYW 653
+RDKNRFH G CSC ++W
Sbjct: 563 IMRDKNRFHHFRNGVCSCKEFW 584
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 85/176 (48%), Gaps = 13/176 (7%)
Query: 87 LCGHDMKFKGYN--ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 144
+C ++F + ++L+ C +L G+ ++ K ++ + + ++ KC +
Sbjct: 201 MCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGN 260
Query: 145 LRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM 204
AR +F+EM +RNVVSW+ MI Y+ G + +AL LF M G PN TF V S
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 205 L--------GRQIHSLIIKS---NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
G++ SL+++S N + + ++D+ + G + EA + +P
Sbjct: 321 CSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMP 376
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 183/458 (39%), Positives = 297/458 (64%), Gaps = 10/458 (2%)
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYA 264
LG IHS++I+S + + +YV +SLL +YA G + A +F+ +PE+D+V+ ++I+G+A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 265 QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
+ G EEAL L+ ++ +G++ + T S+L+A + + +L GK+VH ++++ + +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
N L+D+Y++CG + ++ +FD M ++ +SW +++VG +G G+E +ELF M
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
+ P +T + +L CSH G+ G + F M + +EP+ EH+GC+VDLL RAG+V+
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE-EYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 445 EAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---- 500
+A+E+IK MP +P IW +LLGAC+VH + D+ F ++L++E ++G+Y LS
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 501 -----XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSV 555
DV+ +R ML+ V K PG S +E+ +H F D+SHP+ + +Y K+KE++
Sbjct: 305 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTG 364
Query: 556 RFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVD 615
R + GYVP +S V DV+EE+KE ++ HSEK+A++F LISTPE PI V+KNLR+C D
Sbjct: 365 RLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCAD 424
Query: 616 CHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
CH K +SK+Y RE+ +RD++RFH G CSC DYW
Sbjct: 425 CHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 462
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 149/272 (54%), Gaps = 13/272 (4%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
+R G+ +H+ +I++ + ++++ L+ LY C + A VFD+MPE+++V+W ++I+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAH 221
+++ G +AL L+ +M G +P+ FT ++ S LG+++H +IK +
Sbjct: 64 FAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRN 123
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
++ + LLD+YA+ G++ EA+ +F+ + +++ VS T++I G A G +EA++LF+ +
Sbjct: 124 LHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMES 183
Query: 282 -EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE--VPSYVVLQNSLIDMYSKCGN 338
EG+ +T+ +L A S + G + +R E + + ++D+ ++ G
Sbjct: 184 TEGLLPCEITFVGILYACSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 339 LTYSRRIFDTM-QERTVMSWNAMLVGYGKHGE 369
+ + +M + V+ W +L HG+
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 274
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 301 LASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAM 360
+A + G+ +H+ V+RS S + +QNSL+ +Y+ CG++ + ++FD M E+ +++WN++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 361 LVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGK 420
+ G+ ++G+ E L L+T M + +KPDG T++++LS C+ G G + M K
Sbjct: 61 INGFAENGKPEEALALYTEMNSKG-IKPDGFTIVSLLSACAKIGALTLGKRVHVYMI--K 117
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+G+ ++DL R GRVEEA +M + + W SL+ +V+
Sbjct: 118 VGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVN 168
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
+LL+ C AL G+RVH +MIK ++ L+ LY +C + +A+ +FDEM ++
Sbjct: 94 SLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDK 153
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRS-GTEPNEFTFATV 201
N VSWT++I + G+ +A+ LF M + G P E TF +
Sbjct: 154 NSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGI 197
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/603 (35%), Positives = 335/603 (55%), Gaps = 51/603 (8%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+++ C L G++V+A + + + + + L+ +Y KC+++ A+ +FDE N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHS 211
+ AM S Y ++G +AL +F M+ SG P+ + + S + G+ H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 212 LIIKSNYDAHVYVGSSLLDMYAK-------------------------------DGKIHE 240
++++ +++ + ++L+DMY K +G++
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 241 ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG-EGMQSNYVTYASVLTALS 299
A FE +PE+++VS IISG Q L EEA+++F ++ EG+ ++ VT S+ +A
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 300 GLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNA 359
L +LD K ++ ++ ++ + V L +L+DM+S+CG+ + IF+++ R V +W A
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG 419
+ G +ELF M E+ +KPDGV + L+ CSHGGL +G +IFY M
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 420 KIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGV 479
GV P+ HYGC+VDLLGRAG +EEA + I+ MP EP IW SLL AC V NV++
Sbjct: 601 H-GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 480 FVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVL 530
+ ++ + G+Y LS D+ +R M +K + K PG S I++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 531 HTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLA 590
H F + D SHP + + E+S R G+VPDLS VL DVDE++K +L HSEKLA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLA 779
Query: 591 LSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCG 650
+++GLIS+ +G IR++KNLR+C DCH+FAK+ SK+Y RE+ LRD NRFH I GKCSCG
Sbjct: 780 MAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCG 839
Query: 651 DYW 653
D+W
Sbjct: 840 DFW 842
Score = 202 bits (513), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 198/400 (49%), Gaps = 42/400 (10%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
L+ C RA G ++H ++K Y +F++ L+ Y +C L AR VFDEM ERNV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXSML--------GRQIHS 211
VSWT+MI Y++R +A A++LF +M+R PN T V S G ++++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
I S + + + S+L+DMY K I A+ +F+ ++ C A+ S Y + GL E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL +F + G++ + ++ S +++ S L ++ GK H +VLR+ S+ + N+LID
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE---------------------- 369
MY KC + RIFD M +TV++WN+++ GY ++GE
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 370 ---------GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGK 420
E +E+F M+ + V DGVTM+++ S C H G D I+Y + K
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE--K 498
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAA 460
G++ +VD+ R G E A + +A
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 178/352 (50%), Gaps = 30/352 (8%)
Query: 143 DSLRDARHVFDEMPERNVV-SWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
+SL A+ VF+ + ++I Y+ G ++A+ LF++M+ SG P+++TF
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFG 140
Query: 202 XSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
S G QIH LI+K Y ++V +SL+ YA+ G++ AR +F+ + ER+V
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 254 VSCTAIISGYAQLGLDEEALDL-FRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN 312
VS T++I GYA+ ++A+DL FR +R E + N VT V++A + L L+ G++V+
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
+ S + ++ ++L+DMY KC + ++R+FD + NAM Y + G RE
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI--------GVE 424
L +F LM + V+PD ++ML+ +S CS ++ GK G E
Sbjct: 321 ALGVFNLMMDSG-VRPDRISMLSAISSCSQ----------LRNILWGKSCHGYVLRNGFE 369
Query: 425 PKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVD 476
++D+ + R + AF +M T W S++ + VD
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVD 420
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 391 bits (1004), Expect = e-109, Method: Compositional matrix adjust.
Identities = 215/541 (39%), Positives = 318/541 (58%), Gaps = 20/541 (3%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM 186
P F ++ Y + + A+ FD MP ++ SW MI+ Y++RG +A LF M
Sbjct: 122 PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSM 181
Query: 187 LRSGTEPNEFTFATVXSML----GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEAR 242
+ E NE ++ + S + S K V ++++ Y K K+ A
Sbjct: 182 M----EKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAE 237
Query: 243 GIFECLP-ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL 301
+F+ + +++V+ A+ISGY + E+ L LFR + EG++ N +S L S L
Sbjct: 238 AMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSEL 297
Query: 302 ASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAML 361
++L G+Q+H V +S + + V SLI MY KCG L + ++F+ M+++ V++WNAM+
Sbjct: 298 SALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMI 357
Query: 362 VGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI 421
GY +HG + L LF M + N+++PD +T +AVL C+H GL + G+ F M
Sbjct: 358 SGYAQHGNADKALCLFREMID-NKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVR-DY 415
Query: 422 GVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFV 481
VEP+ +HY C+VDLLGRAG++EEA + I+ MPF P AA++G+LLGAC VH NV++ F
Sbjct: 416 KVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFA 475
Query: 482 GHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHT 532
+LL++ + NA Y L+ DV +R M + V+K PG S IE+ +H
Sbjct: 476 AEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHH 535
Query: 533 FHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALS 592
F +SDR HP + ++ K+KEL + K AGY P+L LH+V+EEQKEK+LL HSEKLA++
Sbjct: 536 FRSSDRIHPELDSIHKKLKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVA 595
Query: 593 FGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDY 652
FG I P+G I+V KNLRIC DCH K+IS+I RE+ +RD RFH G CSCGDY
Sbjct: 596 FGCIKLPQGSQIQVFKNLRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDY 655
Query: 653 W 653
W
Sbjct: 656 W 656
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 44/269 (16%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
G ++ L C AL+ G+++H + K+ V T LI +Y KC L DA +F+ M
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIK 215
+++VV+W AMIS Y+Q G A +AL LF +M+ + P+ TF V ++
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAV-----------LLA 394
Query: 216 SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDL 275
N+ V +G + + +D K+ P+ D +C + G A G EEAL L
Sbjct: 395 CNHAGLVNIGMAYFESMVRDYKVE---------PQPDHYTCMVDLLGRA--GKLEEALKL 443
Query: 276 FRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ-NS------ 328
R + + +A+V L G +VH +V +E + +LQ NS
Sbjct: 444 IRSM-------PFRPHAAVFGTLLGAC------RVHKNVELAEFAAEKLLQLNSQNAAGY 490
Query: 329 --LIDMYSKCGNLTYSRRIFDTMQERTVM 355
L ++Y+ R+ M+E V+
Sbjct: 491 VQLANIYASKNRWEDVARVRKRMKESNVV 519
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 390 bits (1003), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/584 (35%), Positives = 324/584 (55%), Gaps = 43/584 (7%)
Query: 86 ALCGHDMKFKGYN--ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+CG +++ Y +L C + G+++H K ++F+ L+ +Y KC
Sbjct: 130 TMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCG 189
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
L +AR V DEM R+VVSW +++ Y+Q AL + +M + T A++
Sbjct: 190 FLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP 249
Query: 204 MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
+ + MY KD +F + ++ +VS +I Y
Sbjct: 250 AVSNTTTENV-----------------MYVKD--------MFFKMGKKSLVSWNVMIGVY 284
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
+ + EA++L+ ++ +G + + V+ SVL A ++L GK++H ++ R ++ +
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+L+N+LIDMY+KCG L +R +F+ M+ R V+SW AM+ YG G G + + LF+ +++
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDS 404
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRV 443
V PD + + L+ CSH GL + G F MT + P+ EH C+VDLLGRAG+V
Sbjct: 405 GLV-PDSIAFVTTLAACSHAGLLEEGRSCFKLMTD-HYKITPRLEHLACMVDLLGRAGKV 462
Query: 444 EEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX-- 501
+EA+ FI+ M EP +WG+LLGAC VHS+ DIG+ +L ++ +G Y LS
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIY 522
Query: 502 -------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELS 554
+V ++R++M K + K PG S +E+++++HTF DRSHP+ +E+Y ++ L
Sbjct: 523 AKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLV 582
Query: 555 VRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPE-----GVPIRVIKN 609
+ KE GYVPD LHDV+EE KE L HSEKLA+ F L++T E IR+ KN
Sbjct: 583 KKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKN 642
Query: 610 LRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
LRIC DCH AK IS+I RE+ +RD NRFH G CSCGDYW
Sbjct: 643 LRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 168/367 (45%), Gaps = 45/367 (12%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
+R + VH+ +I + L +L+ Y + AR VFDE+PERNV+ MI +
Sbjct: 55 IRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAH 221
Y G+ + + +F M P+ +TF V ++GR+IH K +
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
++VG+ L+ MY K G + EAR + + + RDVVS +++ GYAQ ++AL++ R++
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
+ + T AS+L A+S + N+ Y
Sbjct: 235 VKISHDAGTMASLLPAVSNTTT---------------------------------ENVMY 261
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ +F M +++++SWN M+ Y K+ E +EL++ M E + +PD V++ +VL C
Sbjct: 262 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM-EADGFEPDAVSITSVLPACG 320
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAI 461
G I + K+ P ++D+ + G +E+A + + M +
Sbjct: 321 DTSALSLGKKIHGYIERKKL--IPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS- 377
Query: 462 WGSLLGA 468
W +++ A
Sbjct: 378 WTAMISA 384
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 12/277 (4%)
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
R +HS II + + +G L+ YA + AR +F+ +PER+V+ +I Y
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G E + +F + G ++ ++ T+ VL A S ++ G+++H + + S + +
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
N L+ MY KCG L+ +R + D M R V+SWN+++VGY ++ + LE+ M E ++
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM-ESVKI 237
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGL--DIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
D TM ++L S+ E+ D+F+ M + + ++ + +
Sbjct: 238 SHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSL------VSWNVMIGVYMKNAMPV 291
Query: 445 EAFEFIKKMP---FEPTAAIWGSLLGACSVHSNVDIG 478
EA E +M FEP A S+L AC S + +G
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLG 328
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/587 (33%), Positives = 334/587 (56%), Gaps = 23/587 (3%)
Query: 88 CGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRD 147
C + Y+AL+ C+ +++R +RV+ M+ + P ++ R+++++ KC + D
Sbjct: 117 CSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIID 176
Query: 148 ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--- 204
AR +FDE+PERN+ S+ ++IS + G +A LF M ++ TFA +
Sbjct: 177 ARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAG 236
Query: 205 -----LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI 259
+G+Q+H +K + +V L+DMY+K G I +AR FEC+PE+ V+ +
Sbjct: 237 LGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNV 296
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
I+GYA G EEAL L +R G+ + T + ++ + LA L+ KQ H ++R+
Sbjct: 297 IAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGF 356
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTL 379
S +V +L+D YSK G + +R +FD + + ++SWNA++ GY HG G + ++LF
Sbjct: 357 ESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEK 416
Query: 380 MREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGR 439
M N V P+ VT LAVLS C++ GL ++G +IF M+ G++P+ HY C+++LLGR
Sbjct: 417 MIAAN-VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVH-GIKPRAMHYACMIELLGR 474
Query: 440 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFL 499
G ++EA FI++ P + T +W +LL AC + N+++G V +L + GNY +
Sbjct: 475 DGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVM 534
Query: 500 ---------SXDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDR----SHPRREEV 546
+ + + + + K + P + +E+ H+F + DR + + ++
Sbjct: 535 YNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKRQI 594
Query: 547 YIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRV 606
Y KV EL E GY + +L DVDE+++E++ HSEKLA+++GL++TPE P+++
Sbjct: 595 YQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEWNPLQI 654
Query: 607 IKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
+N RIC +CH ++IS + GRE+ +RD +RFH GKCSCG YW
Sbjct: 655 TQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 389 bits (1000), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/527 (39%), Positives = 309/527 (58%), Gaps = 32/527 (6%)
Query: 147 DARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG 206
+AR +FDEM ERNVV+WT MI+ Y Q A LF M E E ++ ++ +LG
Sbjct: 190 EARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVM----PEKTEVSWTSM--LLG 243
Query: 207 RQIHSLIIKSNYDAH----------VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSC 256
+ I DA V ++++ + + G+I +AR +F+ + +RD +
Sbjct: 244 YTLSGRI----EDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATW 299
Query: 257 TAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR 316
+I Y + G + EALDLF Q++ +G++ ++ + S+L+ + LASL +G+QVH H++R
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Query: 317 SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLEL 376
+ V + + L+ MY KCG L ++ +FD + ++ WN+++ GY HG G E L++
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
F M + P+ VT++A+L+ CS+ G + GL+IF M S K V P EHY C VD+
Sbjct: 420 FHEMPSSGTM-PNKVTLIAILTACSYAGKLEEGLEIFESMES-KFCVTPTVEHYSCTVDM 477
Query: 437 LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNY 496
LGRAG+V++A E I+ M +P A +WG+LLGAC HS +D+ +L E E NAG Y
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTY 537
Query: 497 FFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTF-HASDRSHPRREEV 546
LS DV +R M V K PG S IE+ + +H F ++HP + +
Sbjct: 538 VLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMI 597
Query: 547 YIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRV 606
+ +++ +EAGY PD S VLHDVDEE+K L HSE+LA+++GL+ PEGVPIRV
Sbjct: 598 LMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRV 657
Query: 607 IKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
+KNLR+C DCH K ISK+ RE+ LRD NRFH G+CSC DYW
Sbjct: 658 MKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 169/326 (51%), Gaps = 42/326 (12%)
Query: 92 MKFKG---YNALLNECVSKRALREGQRVHAHM-----IKTRYLPSVFLRTRLIVLYTKCD 143
++FK +N++++ S +E +++ M + L S +++ R+IV
Sbjct: 43 LQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIV------ 96
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
+AR+VF+ MPERNVVSWTAM+ Y Q G +A +LF +M E NE ++ +
Sbjct: 97 ---EARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM----PERNEVSWTVMFG 149
Query: 204 ML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS 255
L R+++ ++ + V ++++ ++G++ EAR IF+ + ER+VV+
Sbjct: 150 GLIDDGRIDKARKLYDMMPVKD----VVASTNMIGGLCREGRVDEARLIFDEMRERNVVT 205
Query: 256 CTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
T +I+GY Q +D+ R+L + V++ S+L + ++ ++ +
Sbjct: 206 WTTMITGYRQ----NNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMP 261
Query: 316 RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLE 375
V+ N++I + + G ++ +RR+FD M++R +W M+ Y + G E L+
Sbjct: 262 MKP----VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 376 LFTLMREENEVKPDGVTMLAVLSGCS 401
LF M+++ V+P +++++LS C+
Sbjct: 318 LFAQMQKQG-VRPSFPSLISILSVCA 342
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 123/260 (47%), Gaps = 39/260 (15%)
Query: 140 TKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
++ + +AR FD + + + SW +++S Y G +A LF +M +E N ++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM----SERNVVSW- 82
Query: 200 TVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI 259
+ L+ Y K+ I EAR +FE +PER+VVS TA+
Sbjct: 83 --------------------------NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAM 116
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
+ GY Q G+ EA LF ++ + N V++ + L +D +++++ + +
Sbjct: 117 VKGYMQEGMVGEAESLFWRMP----ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKD- 171
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTL 379
VV ++I + G + +R IFD M+ER V++W M+ GY ++ +LF +
Sbjct: 172 ---VVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEV 228
Query: 380 MREENEVKPDGVTMLAVLSG 399
M E+ EV + + LSG
Sbjct: 229 MPEKTEVSWTSMLLGYTLSG 248
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 43/275 (15%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
QM G F ++L+ C + +L+ G++VHAH+++ ++ V++ + L+ +Y KC
Sbjct: 321 QMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCG 380
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
L A+ VFD ++++ W ++IS Y+ G +AL +F +M SGT PN+ T + +
Sbjct: 381 ELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILT 440
Query: 204 MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL-------PERDVVSC 256
YA GK+ E IFE + P + SC
Sbjct: 441 ACS-------------------------YA--GKLEEGLEIFESMESKFCVTPTVEHYSC 473
Query: 257 TAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR 316
T + G A G ++A++L + ++ + + ++L A + LD + +
Sbjct: 474 TVDMLGRA--GQVDKAMELIESMT---IKPDATVWGALLGACKTHSRLDLAEVAAKKLFE 528
Query: 317 SE---VPSYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
+E +YV+L +S+ SK G++ R+ T
Sbjct: 529 NEPDNAGTYVLL-SSINASRSKWGDVAVVRKNMRT 562
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 388 bits (996), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/620 (35%), Positives = 340/620 (54%), Gaps = 59/620 (9%)
Query: 88 CGHDMKFKGYNAL--LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLI---VLYTKC 142
C ++ Y + L C + L++ +HA M+KT + + T+ + + T
Sbjct: 6 CSFSLEHNLYETMSCLQRCSKQEELKQ---IHARMLKTGLMQDSYAITKFLSFCISSTSS 62
Query: 143 DSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX 202
D L A+ VFD + W MI +S ++L L+ +ML S N +TF ++
Sbjct: 63 DFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLL 122
Query: 203 SMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYA--------------------- 233
QIH+ I K Y+ VY +SL++ YA
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDV 182
Query: 234 ----------KDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG 283
K GK+ A +F + E++ +S T +ISGY Q +++EAL LF +++
Sbjct: 183 SWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSD 242
Query: 284 MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSR 343
++ + V+ A+ L+A + L +L+ GK +H+++ ++ + VL LIDMY+KCG + +
Sbjct: 243 VEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEAL 302
Query: 344 RIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHG 403
+F +++++V +W A++ GY HG GRE + F M++ +KP+ +T AVL+ CS+
Sbjct: 303 EVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMG-IKPNVITFTAVLTACSYT 361
Query: 404 GLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWG 463
GL + G IFY M ++P EHYGC+VDLLGRAG ++EA FI++MP +P A IWG
Sbjct: 362 GLVEEGKLIFYSMER-DYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWG 420
Query: 464 SLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKA 514
+LL AC +H N+++G +G L+ I+ + G Y + R +M ++
Sbjct: 421 ALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQG 480
Query: 515 VMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHD-V 573
V K PG S I L+ H F A DRSHP E++ K + + + +E GYVP+L +L D V
Sbjct: 481 VAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLV 540
Query: 574 DEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSL 633
D++++E I+ HSEKLA+++GLI T G IR++KNLR+C DCH K ISKIY R++ +
Sbjct: 541 DDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVM 600
Query: 634 RDKNRFHQIVGGKCSCGDYW 653
RD+ RFH GKCSCGDYW
Sbjct: 601 RDRTRFHHFRDGKCSCGDYW 620
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 387 bits (995), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/622 (36%), Positives = 344/622 (55%), Gaps = 74/622 (11%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD----SLRDARHVFDEMP 156
+N C R +R+ ++HA IK+ + ++ D L A +F++MP
Sbjct: 30 INNC---RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 157 ERNVVSWTAMISAYSQ--RGYASQALNLFVQMLRSG-TEPNEFTFATVXSML-------- 205
+RN SW +I +S+ A A+ LF +M+ EPN FTF +V
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYA-----------------------------KDG 236
G+QIH L +K + +V S+L+ MY +DG
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 237 KI----------------HEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
+I AR +F+ + +R VVS +ISGY+ G ++A+++FR+++
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 281 GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLT 340
++ NYVT SVL A+S L SL+ G+ +H + S + VL ++LIDMYSKCG +
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 341 YSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
+ +F+ + V++W+AM+ G+ HG+ + ++ F MR+ V+P V + +L+ C
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAG-VRPSDVAYINLLTAC 385
Query: 401 SHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAA 460
SHGGL + G F M S G+EP+ EHYGC+VDLLGR+G ++EA EFI MP +P
Sbjct: 386 SHGGLVEEGRRYFSQMVSVD-GLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDV 444
Query: 461 IWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMML 511
IW +LLGAC + NV++G V + L+++ ++G Y LS +V +R M
Sbjct: 445 IWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMK 504
Query: 512 KKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLH 571
+K + K+PG S I++D VLH F D SHP+ +E+ + E+S + + AGY P + VL
Sbjct: 505 EKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLL 564
Query: 572 DVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREV 631
+++EE KE +L HSEK+A +FGLIST G PIR++KNLRIC DCH+ K ISK+Y R++
Sbjct: 565 NLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKI 624
Query: 632 SLRDKNRFHQIVGGKCSCGDYW 653
++RD+ RFH G CSC DYW
Sbjct: 625 TVRDRKRFHHFQDGSCSCMDYW 646
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 212/602 (35%), Positives = 334/602 (55%), Gaps = 51/602 (8%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+++ C L G++V+A + + + + + L+ +Y KC+++ A+ +FDE N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHS 211
+ AM S Y ++G +AL +F M+ SG P+ + + S + G+ H
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 212 LIIKSNYDAHVYVGSSLLDMYAK-------------------------------DGKIHE 240
++++ +++ + ++L+DMY K +G++
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 241 ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG-EGMQSNYVTYASVLTALS 299
A FE +PE+++VS IISG Q L EEA+++F ++ EG+ ++ VT S+ +A
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 300 GLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNA 359
L +LD K ++ ++ ++ + V L +L+DM+S+CG+ + IF+++ R V +W A
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTA 541
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG 419
+ G +ELF M E+ +KPDGV + L+ CSHGGL +G +IFY M
Sbjct: 542 AIGAMAMAGNAERAIELFDDMIEQG-LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKL 600
Query: 420 KIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGV 479
GV P+ HYGC+VDLLGRAG +EEA + I+ MP EP IW SLL AC V NV++
Sbjct: 601 H-GVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
Query: 480 FVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVL 530
+ ++ + G+Y LS D+ +R M +K + K PG S I++
Sbjct: 660 YAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKT 719
Query: 531 HTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLA 590
H F + D SHP + + E+S R G+VPDLS VL DVDE++K +L HSEKLA
Sbjct: 720 HEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLA 779
Query: 591 LSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCG 650
+++GLIS+ +G IR++KNLR+C DCH+FAK+ SK+Y RE+ LRD NRFH I GKCSCG
Sbjct: 780 MAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCG 839
Query: 651 DY 652
D+
Sbjct: 840 DF 841
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/400 (30%), Positives = 198/400 (49%), Gaps = 42/400 (10%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
L+ C RA G ++H ++K Y +F++ L+ Y +C L AR VFDEM ERNV
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXSML--------GRQIHS 211
VSWT+MI Y++R +A A++LF +M+R PN T V S G ++++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
I S + + + S+L+DMY K I A+ +F+ ++ C A+ S Y + GL E
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL +F + G++ + ++ S +++ S L ++ GK H +VLR+ S+ + N+LID
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE---------------------- 369
MY KC + RIFD M +TV++WN+++ GY ++GE
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 370 ---------GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGK 420
E +E+F M+ + V DGVTM+++ S C H G D I+Y + K
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE--K 498
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAA 460
G++ +VD+ R G E A + +A
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSA 538
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 178/352 (50%), Gaps = 30/352 (8%)
Query: 143 DSLRDARHVFDEMPERNVV-SWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
+SL A+ VF+ + ++I Y+ G ++A+ LF++M+ SG P+++TF
Sbjct: 81 ESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFG 140
Query: 202 XSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
S G QIH LI+K Y ++V +SL+ YA+ G++ AR +F+ + ER+V
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 254 VSCTAIISGYAQLGLDEEALDL-FRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN 312
VS T++I GYA+ ++A+DL FR +R E + N VT V++A + L L+ G++V+
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
+ S + ++ ++L+DMY KC + ++R+FD + NAM Y + G RE
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI--------GVE 424
L +F LM + V+PD ++ML+ +S CS ++ GK G E
Sbjct: 321 ALGVFNLMMDSG-VRPDRISMLSAISSCSQ----------LRNILWGKSCHGYVLRNGFE 369
Query: 425 PKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVD 476
++D+ + R + AF +M T W S++ + VD
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMS-NKTVVTWNSIVAGYVENGEVD 420
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 216/575 (37%), Positives = 321/575 (55%), Gaps = 31/575 (5%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L C S GQ++H H+ K F+ T LI +Y KC + DAR VF+E P+ +
Sbjct: 59 ILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSS 118
Query: 160 VVS--WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQI 209
+S + A+IS Y+ + A +F +M +G + T + + LGR +
Sbjct: 119 QLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSL 178
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H +K D+ V V +S + MY K G + R +F+ +P + +++ A+ISGY+Q GL
Sbjct: 179 HGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLA 238
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
+ L+L+ Q++ G+ + T SVL++ + L + G +V V + V + N+
Sbjct: 239 YDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNAS 298
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
I MY++CGNL +R +FD M ++++SW AM+ YG HG G L LF M + ++PD
Sbjct: 299 ISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRG-IRPD 357
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF 449
G + VLS CSH GL D+GL++F M + +EP EHY C+VDLLGRAGR++EA EF
Sbjct: 358 GAVFVMVLSACSHSGLTDKGLELFRAMKR-EYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 416
Query: 450 IKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX-------- 501
I+ MP EP A+WG+LLGAC +H NVD+ +++E E N G Y +S
Sbjct: 417 IESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQ 476
Query: 502 -DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE- 559
+ +R MM ++A K+PG S +E +H F A DRSH + EEV+ + EL E
Sbjct: 477 EGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMEL 536
Query: 560 AGYVPDLSCVLHDVDE-EQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHN 618
AG + D D E+ HSE+LA++FG++++ G I VIKNLR+C DCH
Sbjct: 537 AGNM--------DCDRGEEVSSTTREHSERLAIAFGILNSIPGTEILVIKNLRVCEDCHV 588
Query: 619 FAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
F K +SKI R+ +RD +RFH G CSC DYW
Sbjct: 589 FLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDYW 623
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 169/329 (51%), Gaps = 14/329 (4%)
Query: 163 WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLII 214
W + + + S++++L+ MLRSG+ P+ F+F + + G+Q+H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 215 KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSC--TAIISGYAQLGLDEEA 272
K + +V ++L+ MY K G + +AR +FE P+ +S A+ISGY +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 273 LDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDM 332
+FR+++ G+ + VT ++ + L G+ +H ++ + S V + NS I M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 333 YSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVT 392
Y KCG++ RR+FD M + +++WNA++ GY ++G +VLEL+ M+ V PD T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG-VCPDPFT 259
Query: 393 MLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKK 452
+++VLS C+H G + G ++ + S G P + + R G + +A
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESN--GFVPNVFVSNASISMYARCGNLAKARAVFDI 317
Query: 453 MPFEPTAAIWGSLLGACSVHSNVDIGVFV 481
MP + + W +++G +H +IG+ +
Sbjct: 318 MPVKSLVS-WTAMIGCYGMHGMGEIGLML 345
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L+ C A + G V + ++P+VF+ I +Y +C +L AR VFD MP +
Sbjct: 262 SVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVK 321
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM-----LGRQIHSLI 213
++VSWTAMI Y G L LF M++ G P+ F V S L + L
Sbjct: 322 SLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELF 381
Query: 214 IKSNYDAHVYVG----SSLLDMYAKDGKIHEARGIFECLP 249
+ + G S L+D+ + G++ EA E +P
Sbjct: 382 RAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMP 421
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 385 bits (988), Expect = e-107, Method: Compositional matrix adjust.
Identities = 207/571 (36%), Positives = 336/571 (58%), Gaps = 20/571 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
LL R+ +G ++H +++K+ + LI Y+K D+R F++ P+++
Sbjct: 21 LLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHS 211
+W+++IS ++Q +L +M+ P++ + +GR +H
Sbjct: 81 STTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHC 140
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
L +K+ YDA V+VGSSL+DMYAK G+I AR +F+ +P+R+VV+ + ++ GYAQ+G +EE
Sbjct: 141 LSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEE 200
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL LF++ E + N +++SV++ + L+ G+Q+H ++S S + +SL+
Sbjct: 201 ALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
+YSKCG + ++F+ + + + WNAML Y +H ++V+ELF M+ +KP+ +
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSG-MKPNFI 319
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
T L VL+ CSH GL D G F M +I EP +HY +VD+LGRAGR++EA E I
Sbjct: 320 TFLNVLNACSHAGLVDEGRYYFDQMKESRI--EPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 452 KMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------D 502
MP +PT ++WG+LL +C+VH N ++ F ++ E+ ++G + LS D
Sbjct: 378 NMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFED 437
Query: 503 VRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGY 562
R ++ + KE G S +E +HTF A +R H + +E+Y K+ EL ++AGY
Sbjct: 438 AAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGY 497
Query: 563 VPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKY 622
+ D S VL +VD ++K + + HSE+LA++FGLI+ P PIRV+KNLR+C DCHN K+
Sbjct: 498 IADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKF 557
Query: 623 ISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
+S R + +RD NRFH+ GKCSC DYW
Sbjct: 558 MSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 8/161 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++++++ C + L G+++H IK+ + S F+ + L+ LY+KC A VF+E+P
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
+N+ W AM+ AY+Q + + + LF +M SG +PN TF V + GR
Sbjct: 280 VKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRY 339
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
+ +S + +SL+DM + G++ EA + +P
Sbjct: 340 YFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 384 bits (987), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/611 (34%), Positives = 343/611 (56%), Gaps = 65/611 (10%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRD------ARHVF 152
ALL+ ++ +E +++HA + Y+ L+ + K +L D A +
Sbjct: 11 ALLDSGIT---FKEVRQIHAKL----YVDGTLKDDHLVGHFVKAVALSDHKYLDYANQIL 63
Query: 153 DEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE--PNEFTFATVXSML----- 205
D + + + +MI A+ + ++ + + ++L SG + P+ +T +
Sbjct: 64 DRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRM 123
Query: 206 ---GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE---------------------- 240
G Q+H + I+ +D +V + L+ +YA+ G +
Sbjct: 124 RETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTA 183
Query: 241 ---------ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTY 291
AR +FE +PERD ++ A+ISGYAQ+G EAL++F ++ EG++ N V
Sbjct: 184 CARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAM 243
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE 351
SVL+A + L +LD G+ H+++ R+++ V L +L+D+Y+KCG++ + +F M+E
Sbjct: 244 ISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEE 303
Query: 352 RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLD 411
+ V +W++ L G +G G + LELF+LM+++ V P+ VT ++VL GCS G D G
Sbjct: 304 KNVYTWSSALNGLAMNGFGEKCLELFSLMKQDG-VTPNAVTFVSVLRGCSVVGFVDEGQR 362
Query: 412 IFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSV 471
F D + G+EP+ EHYGC+VDL RAGR+E+A I++MP +P AA+W SLL A +
Sbjct: 363 HF-DSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRM 421
Query: 472 HSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRS 522
+ N+++GV ++LE+ET N G Y LS +V +R M K V K+PG S
Sbjct: 422 YKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCS 481
Query: 523 RIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKIL 582
+E++ +H F D+SHP+ ++ K++S R + AGY D + V+ D+DEE+KE L
Sbjct: 482 VMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDAL 541
Query: 583 LGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQI 642
HSEK A++FG++S E VPIR++KNLR+C DCH + ISKI+ RE+ +RD+NRFH
Sbjct: 542 CLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHF 601
Query: 643 VGGKCSCGDYW 653
G CSC +W
Sbjct: 602 KDGHCSCNGFW 612
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 382 bits (981), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/592 (36%), Positives = 332/592 (56%), Gaps = 22/592 (3%)
Query: 82 LLQMALCGHDMKFKGYNAL--LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLY 139
L QM G D+K L + C + L + +H + +K ++ + + + Y
Sbjct: 381 LRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 140 TKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
KC SL A+ VF + + V SW A+I ++Q +L+ +QM SG P+ FT
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 200 TVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
++ S LG+++H II++ + ++V S+L +Y G++ + +F+ + ++
Sbjct: 501 SLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDK 560
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVH 311
+VS +I+GY Q G + AL +FRQ+ G+Q ++ V A S L SL G++ H
Sbjct: 561 SLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAH 620
Query: 312 NHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGR 371
+ L+ + + SLIDMY+K G++T S ++F+ ++E++ SWNAM++GYG HG +
Sbjct: 621 AYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAK 680
Query: 372 EVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG 431
E ++LF M+ PD +T L VL+ C+H GL GL + D G++P +HY
Sbjct: 681 EAIKLFEEMQRTGH-NPDDLTFLGVLTACNHSGLIHEGLR-YLDQMKSSFGLKPNLKHYA 738
Query: 432 CVVDLLGRAGRVEEAFEFI-KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIET 490
CV+D+LGRAG++++A + ++M E IW SLL +C +H N+++G V +L E+E
Sbjct: 739 CVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEP 798
Query: 491 GNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHP 541
NY LS DVR +R M + ++ K+ G S IEL++ + +F +R
Sbjct: 799 EKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLD 858
Query: 542 RREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEG 601
EE+ L ++ + GY PD V HD+ EE+K + L GHSEKLAL++GLI T EG
Sbjct: 859 GFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEG 918
Query: 602 VPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
IRV KNLRICVDCHN AK ISK+ RE+ +RD RFH G CSCGDYW
Sbjct: 919 TTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 17/319 (5%)
Query: 100 LLNECVSKRALREGQRVHAHMI-KTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
LL ++ + G+++H + TR L TR+I +Y C S D+R VFD + +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSK 149
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE--PNEFTFATVXSM--------LGRQ 208
N+ W A+IS+YS+ + L F++M+ S T+ P+ FT+ V +G
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMI-STTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H L++K+ V+VG++L+ Y G + +A +F+ +PER++VS ++I ++ G
Sbjct: 209 VHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGF 268
Query: 269 DEEALDLFRQL---RGEG-MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
EE+ L ++ G+G + T +VL + + GK VH ++ + +V
Sbjct: 269 SEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELV 328
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
L N+L+DMYSKCG +T ++ IF + V+SWN M+ G+ G+ ++ M
Sbjct: 329 LNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGG 388
Query: 385 E-VKPDGVTMLAVLSGCSH 402
E VK D VT+L + C H
Sbjct: 389 EDVKADEVTILNAVPVCFH 407
Score = 154 bits (388), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 167/319 (52%), Gaps = 15/319 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y ++ C + G VH ++KT + VF+ L+ Y + DA +FD MP
Sbjct: 190 YPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMP 249
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE----PNEFTFATVXSM-------- 204
ERN+VSW +MI +S G++ ++ L +M+ + P+ T TV +
Sbjct: 250 ERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIG 309
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYA 264
LG+ +H +K D + + ++L+DMY+K G I A+ IF+ ++VVS ++ G++
Sbjct: 310 LGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 369
Query: 265 QLGLDEEALDLFRQLR--GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY 322
G D+ RQ+ GE ++++ VT + + + L K++H + L+ E
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
++ N+ + Y+KCG+L+Y++R+F ++ +TV SWNA++ G+ + + R L+ M+
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 383 ENEVKPDGVTMLAVLSGCS 401
+ PD T+ ++LS CS
Sbjct: 490 SG-LLPDSFTVCSLLSACS 507
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 14/279 (5%)
Query: 205 LGRQIHSLIIKS----NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
+GR+IH L+ S N D + + ++ MYA G ++R +F+ L +++ A+I
Sbjct: 102 MGRKIHQLVSGSTRLRNDDV---LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVI 158
Query: 261 SGYAQLGLDEEALDLF-RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
S Y++ L +E L+ F + + ++ TY V+ A +G++ + G VH V+++ +
Sbjct: 159 SSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL 218
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTL 379
V + N+L+ Y G +T + ++FD M ER ++SWN+M+ + +G E L
Sbjct: 219 VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGE 278
Query: 380 MREEN---EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
M EEN PD T++ VL C+ + GL + K+ ++ + ++D+
Sbjct: 279 MMEENGDGAFMPDVATLVTVLPVCARE--REIGLGKGVHGWAVKLRLDKELVLNNALMDM 336
Query: 437 LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNV 475
+ G + A + I KM W +++G S +
Sbjct: 337 YSKCGCITNA-QMIFKMNNNKNVVSWNTMVGGFSAEGDT 374
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 382 bits (980), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/590 (34%), Positives = 325/590 (55%), Gaps = 20/590 (3%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L M G + + + + L C + +G+ +H ++ + + + L+ +Y K
Sbjct: 350 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 409
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
+ ++R V +MP R+VV+W A+I Y++ +AL F M G N T +V
Sbjct: 410 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 469
Query: 202 XSML---------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERD 252
S G+ +H+ I+ + +++ +V +SL+ MYAK G + ++ +F L R+
Sbjct: 470 LSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN 529
Query: 253 VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN 312
+++ A+++ A G EE L L ++R G+ + +++ L+A + LA L+ G+Q+H
Sbjct: 530 IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG 589
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
++ + N+ DMYSKCG + ++ R++ SWN ++ G+HG E
Sbjct: 590 LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEE 649
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
V F M E +KP VT +++L+ CSHGGL D+GL +YDM + G+EP EH C
Sbjct: 650 VCATFHEMLEMG-IKPGHVTFVSLLTACSHGGLVDKGL-AYYDMIARDFGLEPAIEHCIC 707
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
V+DLLGR+GR+ EA FI KMP +P +W SLL +C +H N+D G L ++E +
Sbjct: 708 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 767
Query: 493 AGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRR 543
Y S DV ++R M K + K+ S ++L + +F DR+HP+
Sbjct: 768 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 827
Query: 544 EEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVP 603
E+Y K++++ KE+GYV D S L D DEEQKE L HSE+LAL++ L+STPEG
Sbjct: 828 MEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGST 887
Query: 604 IRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
+R+ KNLRIC DCH+ K++S++ GR + LRD+ RFH G CSC DYW
Sbjct: 888 VRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 186/348 (53%), Gaps = 29/348 (8%)
Query: 138 LYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT 197
+YTK ++ ARH+FD MP RN VSW M+S + G + + F +M G +P+ F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 198 FATVXSMLGR---------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL 248
A++ + GR Q+H + KS + VYV +++L +Y G + +R +FE +
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 249 PERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGK 308
P+R+VVS T+++ GY+ G EE +D+++ +RGEG+ N + + V+++ L G+
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 309 QVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHG 368
Q+ V++S + S + ++NSLI M GN+ Y+ IFD M ER +SWN++ Y ++G
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 369 EGREVLELFTLMRE-ENEVKPDGV-TMLAVLSGCSH--GGLEDRGLDIFYDMTSGKIGVE 424
E +F+LMR +EV V T+L+VL H G GL + K+G +
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV-------KMGFD 293
Query: 425 PKKEHYGCVVDLLGR----AGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
CV + L R AGR EA K+MP + + W SL+ +
Sbjct: 294 SVV----CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS-WNSLMAS 336
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 189/369 (51%), Gaps = 13/369 (3%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G+++ ++K+ + + LI + ++ A ++FD+M ER+ +SW ++ +AY+Q
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIHSLIIKSNYDAHVYV 224
G+ ++ +F M R E N T +T+ S+LG R IH L++K +D+ V V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGM 284
++LL MYA G+ EA +F+ +P +D++S ++++ + G +AL L + G
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
NYVT+ S L A + G+ +H V+ S + ++ N+L+ MY K G ++ SRR
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 345 IFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC-SHG 403
+ M R V++WNA++ GY + + + L F MR E V + +T+++VLS C G
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLPG 477
Query: 404 GLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWG 463
L +RG + + S G E + ++ + + G + + + + W
Sbjct: 478 DLLERGKPLHAYIVSA--GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWN 534
Query: 464 SLLGACSVH 472
++L A + H
Sbjct: 535 AMLAANAHH 543
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 182/380 (47%), Gaps = 30/380 (7%)
Query: 106 SKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTA 165
S REG +VH + K+ L V++ T ++ LY + +R VF+EMP+RNVVSWT+
Sbjct: 71 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 130
Query: 166 MISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSN 217
++ YS +G + ++++ M G NE + + V S LGRQI ++KS
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 190
Query: 218 YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFR 277
++ + V +SL+ M G + A IF+ + ERD +S +I + YAQ G EE+ +F
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 250
Query: 278 QLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCG 337
+R + N T +++L+ L + G+ +H V++ S V + N+L+ MY+ G
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 310
Query: 338 NLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
+ +F M + ++SWN+++ + G + L L M + + VT + L
Sbjct: 311 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK-SVNYVTFTSAL 369
Query: 398 SGCSHGGLEDRGL---------DIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
+ C ++G +FY+ G +V + G+ G + E+
Sbjct: 370 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGN-----------ALVSMYGKIGEMSESRR 418
Query: 449 FIKKMPFEPTAAIWGSLLGA 468
+ +MP A W +L+G
Sbjct: 419 VLLQMPRRDVVA-WNALIGG 437
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 377 bits (969), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/605 (34%), Positives = 333/605 (55%), Gaps = 54/605 (8%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
L C R L + +HAH++K + L L+ +Y KC + A VFDEMP R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSGT-EPNEFTFATVXSML--------GRQIHS 211
++W ++++A +Q + + L++F + S P++F F+ + GRQ+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
I S Y V SSL+DMYAK G ++ A+ +F+ + ++ +S TA++SGYA+ G EE
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 272 ALDLFRQL-----------------RGEGMQS---------------NYVTYASVLTALS 299
AL+LFR L G+G+++ + + +S++ A +
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 300 GLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNA 359
LA+ G+QVH V+ S V + N+LIDMY+KC ++ ++ IF M+ R V+SW +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG 419
++VG +HG+ + L L+ M VKP+ VT + ++ CSH G ++G ++F MT
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHG-VKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK- 367
Query: 420 KIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGV 479
G+ P +HY C++DLLGR+G ++EA I MPF P W +LL AC +G+
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGI 427
Query: 480 FVG-HRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQV 529
+ H + + + Y LS V R + + V K+PG S +E+ +
Sbjct: 428 RIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKE 487
Query: 530 LHTFHASDRSHPRREEVYIKVKELSVRFK-EAGYVPDLSCVLHDVDEEQKEKILLGHSEK 588
F+A + SHP +E+++ +K+L + GYVPD S +LHD+DE++KEK+L HSE+
Sbjct: 488 TEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSER 547
Query: 589 LALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCS 648
A+++GL+ G PIR++KNLR+C DCH K+IS+I RE+ +RD R+H GGKCS
Sbjct: 548 SAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCS 607
Query: 649 CGDYW 653
C D+W
Sbjct: 608 CNDFW 612
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 155/321 (48%), Gaps = 50/321 (15%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++AL+ C + ++ G++VH H I + Y +++ L+ +Y KC L A+ VFD +
Sbjct: 108 FSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIR 167
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLF---------------VQMLRSGTEPNEFTFAT- 200
+N +SWTAM+S Y++ G +AL LF ++SG F+ T
Sbjct: 168 VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTE 227
Query: 201 ------------------------VXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDG 236
S+ GRQ+H L+I +D+ V++ ++L+DMYAK
Sbjct: 228 MRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS 287
Query: 237 KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
+ A+ IF + RDVVS T++I G AQ G E+AL L+ + G++ N VT+ ++
Sbjct: 288 DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIY 347
Query: 297 ALSGLASLDHGKQV-----HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ- 350
A S + ++ G+++ ++ +R + Y L+D+ + G L + + TM
Sbjct: 348 ACSHVGFVEKGRELFQSMTKDYGIRPSLQHY----TCLLDLLGRSGLLDEAENLIHTMPF 403
Query: 351 ERTVMSWNAMLVGYGKHGEGR 371
+W A+L + G G+
Sbjct: 404 PPDEPTWAALLSACKRQGRGQ 424
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/564 (35%), Positives = 328/564 (58%), Gaps = 22/564 (3%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
+++ Q+VHAH+I T Y S L T+LI L ++ +F +P + + ++I +
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAH 221
S+ + + +ML S P+ +TF +V +G+ +H + S +
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
YV ++L+ Y+K G + AR +F+ +PE+ +V+ +++SG+ Q GL +EA+ +F Q+R
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
G + + T+ S+L+A + ++ G VH +++ + V L +LI++YS+CG++
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+R +FD M+E V +W AM+ YG HG G++ +ELF M ++ P+ VT +AVLS C+
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTA-- 459
H GL + G ++ MT + P EH+ C+VD+LGRAG ++EA++FI ++ A
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLI-PGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATA 380
Query: 460 -AIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDM 509
A+W ++LGAC +H N D+GV + RL+ +E N G++ LS +V +RD
Sbjct: 381 PALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDG 440
Query: 510 MLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCV 569
M++ + K+ G S IE++ + F D SH E+Y ++ L R KE GY P V
Sbjct: 441 MMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEV 500
Query: 570 LHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGR 629
+H V+EE+KE L HSEKLA++FGL+ T + V I ++KNLRIC DCH+ KYIS + R
Sbjct: 501 MHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICEDCHSAFKYISIVSNR 559
Query: 630 EVSLRDKNRFHQIVGGKCSCGDYW 653
++++RDK RFH G CSC DYW
Sbjct: 560 QITVRDKLRFHHFQNGSCSCLDYW 583
Score = 154 bits (390), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 155/280 (55%), Gaps = 16/280 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +++ C ALR G+ VH H + + + +++ L+ Y+KC + AR VFD MP
Sbjct: 110 FTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMP 169
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
E+++V+W +++S + Q G A +A+ +F QM SG EP+ TF ++ S LG
Sbjct: 170 EKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSW 229
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H II D +V +G++L+++Y++ G + +AR +F+ + E +V + TA+IS Y G
Sbjct: 230 VHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGY 289
Query: 269 DEEALDLFRQLRGE-GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE--VPSYVVL 325
++A++LF ++ + G N VT+ +VL+A + ++ G+ V+ + +S +P V
Sbjct: 290 GQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPG-VEH 348
Query: 326 QNSLIDMYSKCGNLTYSRRI---FDTMQERTVMS-WNAML 361
++DM + G L + + D + T + W AML
Sbjct: 349 HVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAML 388
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 80 QPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLY 139
Q QM G + + +LL+ C A+ G VH ++I +V L T LI LY
Sbjct: 194 QVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLY 253
Query: 140 TKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRS-GTEPNEFTF 198
++C + AR VFD+M E NV +WTAMISAY GY QA+ LF +M G PN TF
Sbjct: 254 SRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTF 313
Query: 199 ATVXSML--------GRQIHSLIIKS-----NYDAHVYVGSSLLDMYAKDGKIHEA 241
V S GR ++ + KS + HV ++DM + G + EA
Sbjct: 314 VAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEA 365
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/626 (34%), Positives = 334/626 (53%), Gaps = 92/626 (14%)
Query: 115 RVHAHMIKTR--YLPSVFLRTRLIVLYTKCDS----LRDARHVFDEMPERNVVSWT---- 164
+ HA +K+ Y+ SV L+ +Y+KC S L AR VFDE+ E++ SWT
Sbjct: 170 QFHAAALKSGAGYITSV--SNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 165 ----------------------------AMISAYSQRGYASQALNLFVQMLRSGTEPNEF 196
AMIS Y RG+ +AL + +M+ SG E +EF
Sbjct: 228 GYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEF 287
Query: 197 TFATVXS--------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL 248
T+ +V LG+Q+H+ +++ D + +SL+ +Y K GK EAR IFE +
Sbjct: 288 TYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKM 346
Query: 249 PERDVVSCTAIISGY-------------------------------AQLGLDEEALDLFR 277
P +D+VS A++SGY A+ G EE L LF
Sbjct: 347 PAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFS 406
Query: 278 QLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCG 337
++ EG + ++ + + + L + +G+Q H +L+ S + N+LI MY+KCG
Sbjct: 407 CMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCG 466
Query: 338 NLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
+ +R++F TM +SWNA++ G+HG G E ++++ M ++ ++PD +T+L VL
Sbjct: 467 VVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG-IRPDRITLLTVL 525
Query: 398 SGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEP 457
+ CSH GL D+G ++D + P +HY ++DLL R+G+ +A I+ +PF+P
Sbjct: 526 TACSHAGLVDQGRK-YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 458 TAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRD 508
TA IW +LL C VH N+++G+ +L + + G Y LS +V +R
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRK 644
Query: 509 MMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSC 568
+M + V KE S IE++ +HTF D SHP E VYI +++L + GYVPD S
Sbjct: 645 LMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSF 704
Query: 569 VLHDVDEE-QKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIY 627
VLHDV+ + KE +L HSEK+A++FGL+ P G IR+ KNLR C DCHNF +++S +
Sbjct: 705 VLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVV 764
Query: 628 GREVSLRDKNRFHQIVGGKCSCGDYW 653
R++ LRD+ RFH G+CSCG++W
Sbjct: 765 QRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 208/489 (42%), Gaps = 120/489 (24%)
Query: 97 YNALLNECVSKR--ALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
Y A L C+ R +L+ + VH ++I + P + RLI +Y K L AR +FDE
Sbjct: 15 YAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDE 74
Query: 155 MPE---------------------------------RNVVSWTAMISAYSQRGYASQALN 181
+ E R+ V + AMI+ +S A+N
Sbjct: 75 ISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAIN 134
Query: 182 LFVQMLRSGTEPNEFTFATVXSMLGR---------QIHSLIIKSNYDAHVYVGSSLLDMY 232
LF +M G +P+ FTFA+V + L Q H+ +KS V ++L+ +Y
Sbjct: 135 LFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVY 194
Query: 233 AKDGK----IHEARGIFECLPERD--------------------------------VVSC 256
+K +H AR +F+ + E+D +V+
Sbjct: 195 SKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAY 254
Query: 257 TAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR 316
A+ISGY G +EAL++ R++ G++ + TY SV+ A + L GKQVH +VLR
Sbjct: 255 NAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLR 314
Query: 317 SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLEL 376
E S+ NSL+ +Y KCG +R IF+ M + ++SWNA+L GY G E +
Sbjct: 315 REDFSF-HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLI 373
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMT-----------SG------ 419
F M+E+N ++ + ++SG + G + GL +F M SG
Sbjct: 374 FKEMKEKNI-----LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCA 428
Query: 420 ----------------KIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWG 463
KIG + ++ + + G VEEA + + MP + + W
Sbjct: 429 VLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS-WN 487
Query: 464 SLLGACSVH 472
+L+ A H
Sbjct: 488 ALIAALGQH 496
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 153/313 (48%), Gaps = 42/313 (13%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +++ C + L+ G++VHA++++ R S L+ LY KC +AR +F++MP
Sbjct: 289 YPSVIRACATAGLLQLGKQVHAYVLR-REDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP 347
Query: 157 ERNVVSWTAMISAY-------------------------------SQRGYASQALNLFVQ 185
+++VSW A++S Y ++ G+ + L LF
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSC 407
Query: 186 MLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGK 237
M R G EP ++ F+ G+Q H+ ++K +D+ + G++L+ MYAK G
Sbjct: 408 MKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGV 467
Query: 238 IHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA 297
+ EAR +F +P D VS A+I+ Q G EA+D++ ++ +G++ + +T +VLTA
Sbjct: 468 VEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTA 527
Query: 298 LSGLASLDHGKQVHNHV-LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER-TVM 355
S +D G++ + + +P LID+ + G + + + +++ + T
Sbjct: 528 CSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 356 SWNAMLVGYGKHG 368
W A+L G HG
Sbjct: 588 IWEALLSGCRVHG 600
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 16/180 (8%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
++ + C A GQ+ HA ++K + S+ LI +Y KC + +AR VF M
Sbjct: 419 AFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM 478
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLII- 214
P + VSW A+I+A Q G+ ++A++++ +ML+ G P+ T TV + H+ ++
Sbjct: 479 PCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS---HAGLVD 535
Query: 215 --KSNYDAHVYV---------GSSLLDMYAKDGKIHEARGIFECLPERDVVSC-TAIISG 262
+ +D+ V + L+D+ + GK +A + E LP + A++SG
Sbjct: 536 QGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSG 595
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/574 (35%), Positives = 321/574 (55%), Gaps = 24/574 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ A++N C + + +R+ M + ++ Y + + DA +F +MP
Sbjct: 131 WTAMVNGCFRSGKVDQAERLFYQMP----VKDTAAWNSMVHGYLQFGKVDDALKLFKQMP 186
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
+NV+SWT MI Q + +AL+LF MLR + F V + +G Q
Sbjct: 187 GKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ 246
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H LIIK + YV +SL+ YA +I ++R +F+ V TA++SGY+
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKK 306
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
E+AL +F + + N T+AS L + S L +LD GK++H ++ + + + NS
Sbjct: 307 HEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNS 366
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
L+ MYS GN+ + +F + +++++SWN+++VG +HG G+ +F M N+ +P
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNK-EP 425
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D +T +LS CSH G ++G +FY M+SG ++ K +HY C+VD+LGR G+++EA E
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEE 485
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS-------- 500
I++M +P +W +LL AC +HS+VD G + +++ ++ Y LS
Sbjct: 486 LIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGR 545
Query: 501 -XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
+V LR M K +MK+PG S + + H F + D+ H R +Y K++ L + KE
Sbjct: 546 WSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCSR--IYEKLEFLREKLKE 603
Query: 560 AGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNF 619
GY PD LHDV++EQKE++L HSE+LA++FGLI+T EG + V+KNLR+C DCH
Sbjct: 604 LGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTV 663
Query: 620 AKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
K IS + GRE+ LRD RFH G CSCGDYW
Sbjct: 664 IKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 169/348 (48%), Gaps = 8/348 (2%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM 186
P V L T++I YT+ + L DA ++FDEMP R+VVSW +MIS + G + A+ LF +M
Sbjct: 64 PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM 123
Query: 187 L-RSGTEPNEFTFATVXSMLGRQIHSLIIKSNY-DAHVYVGSSLLDMYAKDGKIHEARGI 244
RS S Q L + D + +S++ Y + GK+ +A +
Sbjct: 124 PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAW--NSMVHGYLQFGKVDDALKL 181
Query: 245 FECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASL 304
F+ +P ++V+S T +I G Q EALDLF+ + ++S + V+TA + +
Sbjct: 182 FKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAF 241
Query: 305 DHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGY 364
G QVH +++ + SLI Y+ C + SR++FD V W A+L GY
Sbjct: 242 HMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGY 301
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVE 424
+ + + L +F+ M N + P+ T + L+ CS G D G ++ + K+G+E
Sbjct: 302 SLNKKHEDALSIFSGML-RNSILPNQSTFASGLNSCSALGTLDWGKEM--HGVAVKLGLE 358
Query: 425 PKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+V + +G V +A K+ F+ + W S++ C+ H
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQH 405
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 24/174 (13%)
Query: 304 LDHGKQVHNHVLRSEVPS-YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLV 362
+D ++V N +VPS +V L +I Y++ L + +FD M R V+SWN+M+
Sbjct: 51 IDEAREVFN-----QVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMIS 105
Query: 363 GYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIG 422
G + G+ ++LF M E + V+ A+++GC G D+ +FY M
Sbjct: 106 GCVECGDMNTAVKLFDEMPERSV-----VSWTAMVNGCFRSGKVDQAERLFYQM------ 154
Query: 423 VEPKKE--HYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSN 474
P K+ + +V + G+V++A + K+MP + + W +++ C + N
Sbjct: 155 --PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVIS-WTTMI--CGLDQN 203
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 237 KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
+I EAR +F +P V T +I+GY + +AL+LF ++ + V++ S+++
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMP----VRDVVSWNSMIS 105
Query: 297 ALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS 356
++ ++ + + V S+ + N + G + + R+F M + +
Sbjct: 106 GCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCF----RSGKVDQAERLFYQMPVKDTAA 161
Query: 357 WNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDM 416
WN+M+ GY + G+ + L+LF M +N + TM+ L G LD+F +M
Sbjct: 162 WNSMVHGYLQFGKVDDALKLFKQMPGKNVI--SWTTMICGLDQNERSG---EALDLFKNM 216
Query: 417 TSGKIGVEPKKEHYGCVVDLLGRA 440
+ ++ + CV+ A
Sbjct: 217 L--RCCIKSTSRPFTCVITACANA 238
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/610 (34%), Positives = 334/610 (54%), Gaps = 39/610 (6%)
Query: 78 LQQPLLQMALCG-----HDMKFKGYNALLNECVS--KRA--LREGQRVHAHMIKTRYLPS 128
++ P+LQ L H+ + + EC+ KR + E ++VHA IK S
Sbjct: 2 IKAPILQSLLASRDDLTHNPEVNNFGGKEQECLYLLKRCHNIDEFKQVHARFIKLSLFYS 61
Query: 129 VFLRTRLIVLYTKC------DSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNL 182
++ KC +S+ A +F + + + MI Y +AL
Sbjct: 62 SSFSASSVL--AKCAHSGWENSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCF 119
Query: 183 FVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAK 234
+ +M++ G EP+ FT+ + G+QIH + K +A V+V +SL++MY +
Sbjct: 120 YNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGR 179
Query: 235 DGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE-GMQSNYVTYAS 293
G++ + +FE L + S ++++S A +G+ E L LFR + E +++ S
Sbjct: 180 CGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVS 239
Query: 294 VLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT 353
L A + +L+ G +H +LR+ +++Q SL+DMY KCG L + IF M++R
Sbjct: 240 ALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRN 299
Query: 354 VMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIF 413
++++AM+ G HGEG L +F+ M +E ++PD V ++VL+ CSH GL G +F
Sbjct: 300 NLTYSAMISGLALHGEGESALRMFSKMIKEG-LEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 414 YDM-TSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+M GK VEP EHYGC+VDLLGRAG +EEA E I+ +P E IW + L C V
Sbjct: 359 AEMLKEGK--VEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVR 416
Query: 473 SNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSR 523
N+++G LL++ + N G+Y +S DV R + K + + PG S
Sbjct: 417 QNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSI 476
Query: 524 IELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILL 583
+EL H F + DRSHP+ +E+Y + ++ + K GY PDL+ +L +VDEE+K++ L
Sbjct: 477 VELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGYSPDLTQILLNVDEEEKKERLK 536
Query: 584 GHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIV 643
GHS+K+A++FGL+ TP G I++ +NLR+C DCH + K IS IY RE+ +RD+NRFH
Sbjct: 537 GHSQKVAIAFGLLYTPPGSIIKIARNLRMCSDCHTYTKKISMIYEREIVVRDRNRFHLFK 596
Query: 644 GGKCSCGDYW 653
GG CSC DYW
Sbjct: 597 GGTCSCKDYW 606
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 208/606 (34%), Positives = 329/606 (54%), Gaps = 57/606 (9%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRD--ARHVFDEMPER 158
L++C++ L + +++H H+++ S ++ T+LI TK D AR V + + R
Sbjct: 56 LDDCIN---LNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFR 112
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIH 210
N WTA+I Y+ G +A+ ++ M + P FTF+ + LGRQ H
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCT------------- 257
+ + VYVG++++DMY K I AR +F+ +PERDV+S T
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNME 232
Query: 258 ------------------AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS 299
A+++G+AQ +EAL+ F ++ G++++ VT A ++A +
Sbjct: 233 CAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACA 292
Query: 300 GLASLDHGKQVHNHVLRSEV-PS-YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSW 357
L + + + +S PS +VV+ ++LIDMYSKCGN+ + +F +M + V ++
Sbjct: 293 QLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTY 352
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMT 417
++M++G HG +E L LF M + E+KP+ VT + L CSH GL D+G +F M
Sbjct: 353 SSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMY 412
Query: 418 SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDI 477
GV+P ++HY C+VDLLGR GR++EA E IK M EP +WG+LLGAC +H+N +I
Sbjct: 413 Q-TFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEI 471
Query: 478 GVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRI-ELD 527
L E+E GNY LS V +R ++ +K + K P S + + +
Sbjct: 472 AEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKN 531
Query: 528 QVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSE 587
+H F + +HP ++ K++EL R GY PDLS V +DV + K IL+ H+E
Sbjct: 532 GQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTE 591
Query: 588 KLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKC 647
KLAL+F L++T I ++KNLR+C+DCH F + S++ G+ + +RD RFH G C
Sbjct: 592 KLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDC 651
Query: 648 SCGDYW 653
SCGD+W
Sbjct: 652 SCGDFW 657
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 149/309 (48%), Gaps = 44/309 (14%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++ALL C + + L G++ HA + R V++ +I +Y KC+S+ AR VFDEMP
Sbjct: 152 FSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMP 211
Query: 157 ERNVVSWTAMISAY-------------------------------SQRGYASQALNLFVQ 185
ER+V+SWT +I+AY +Q +AL F +
Sbjct: 212 ERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDR 271
Query: 186 MLRSGTEPNEFTFA---TVXSMLGRQIHS-----LIIKSNYDA--HVYVGSSLLDMYAKD 235
M +SG +E T A + + LG ++ + KS Y HV +GS+L+DMY+K
Sbjct: 272 MEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKC 331
Query: 236 GKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG-MQSNYVTYASV 294
G + EA +F + ++V + +++I G A G +EAL LF + + ++ N VT+
Sbjct: 332 GNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGA 391
Query: 295 LTALSGLASLDHGKQVHNHVLRS-EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ-ER 352
L A S +D G+QV + + ++ V ++D+ + G L + + TM E
Sbjct: 392 LMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEP 451
Query: 353 TVMSWNAML 361
W A+L
Sbjct: 452 HGGVWGALL 460
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 5/121 (4%)
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNL--TYSRRIFDTM 349
+S+++ L +L+ KQ+H HVLR + + LI +K G Y+RR+ + +
Sbjct: 50 SSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPV 109
Query: 350 QERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRG 409
Q R W A++ GY G+ E + ++ MR+E E+ P T A+L C G ++D
Sbjct: 110 QFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKE-EITPVSFTFSALLKAC--GTMKDLN 166
Query: 410 L 410
L
Sbjct: 167 L 167
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 372 bits (955), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/582 (35%), Positives = 323/582 (55%), Gaps = 27/582 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++ L C AL +G ++H +K + V + L+ +Y+KC + +A VF +
Sbjct: 110 FSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV 169
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE--PNEFTFATVXSML--------G 206
+R+++SW AMI+ + GY S+AL+ F M + + P+EFT ++ G
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 207 RQIHSLIIKSNY--DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYA 264
+QIH +++S + + + SL+D+Y K G + AR F+ + E+ ++S +++I GYA
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 265 QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
Q G EA+ LF++L+ Q + +S++ + A L GKQ+ ++
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS 349
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
+ NS++DMY KCG + + + F MQ + V+SW ++ GYGKHG G++ + +F M N
Sbjct: 350 VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHN 409
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
++PD V LAVLS CSH G+ G ++F + G++P+ EHY CVVDLLGRAGR++
Sbjct: 410 -IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH-GIKPRVEHYACVVDLLGRAGRLK 467
Query: 445 EAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---- 500
EA I MP +P IW +LL C VH ++++G VG LL I+ N NY +S
Sbjct: 468 EAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYG 527
Query: 501 -----XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSV 555
+ + R++ K + KE G S +E+++ +H F + + SHP + +KE
Sbjct: 528 QAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAER 587
Query: 556 RFKEA-GYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIS---TPEGVPIRVIKNLR 611
R +E GYV L LHD+D+E KE+ L HSEKLA+ L + +G IRV KNLR
Sbjct: 588 RLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLR 647
Query: 612 ICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
+CVDCH F K +SKI +RD RFH G CSCGDYW
Sbjct: 648 VCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 172/298 (57%), Gaps = 12/298 (4%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L C K +G +VH +++K+ ++ LI +Y KC A VFD MPER
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIH 210
NVVSW+A++S + G +L+LF +M R G PNEFTF+T G QIH
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
+K ++ V VG+SL+DMY+K G+I+EA +F + +R ++S A+I+G+ G
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 271 EALDLFRQLRGEGMQS--NYVTYASVLTALSGLASLDHGKQVHNHVLRS--EVPSYVVLQ 326
+ALD F ++ ++ + T S+L A S + GKQ+H ++RS PS +
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
SL+D+Y KCG L +R+ FD ++E+T++SW+++++GY + GE E + LF ++E N
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELN 308
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 143/265 (53%), Gaps = 8/265 (3%)
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
G Q+H ++KS ++ + L+DMY K + A +F+ +PER+VVS +A++SG+
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
G + +L LF ++ +G+ N T+++ L A L +L+ G Q+H L+ V +
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN- 384
NSL+DMYSKCG + + ++F + +R+++SWNAM+ G+ G G + L+ F +M+E N
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAG--- 441
+ +PD T+ ++L CS G+ G I + G +VDL + G
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 442 RVEEAFEFIKKMPFEPTAAIWGSLL 466
+AF+ IK E T W SL+
Sbjct: 265 SARKAFDQIK----EKTMISWSSLI 285
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/611 (33%), Positives = 340/611 (55%), Gaps = 61/611 (9%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVL------YTKCDSLRD-ARHV 151
ALL C S L+ +H +++T + VF+ +RL+ L + K +L A +
Sbjct: 17 ALLQSCSSFSDLK---IIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGI 73
Query: 152 FDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS-------- 203
F ++ N+ + +I +S S+A + QML+S P+ TF +
Sbjct: 74 FSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECV 133
Query: 204 MLGRQIHSLIIKSNYDAHVYVGSSLLDMYA------------------------------ 233
++G Q HS I++ + VYV +SL+ MYA
Sbjct: 134 LVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGY 193
Query: 234 -KDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYA 292
K G + AR +F+ +P R++ + + +I+GYA+ E+A+DLF ++ EG+ +N
Sbjct: 194 CKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMV 253
Query: 293 SVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER 352
SV+++ + L +L+ G++ + +V++S + ++L +L+DM+ +CG++ + +F+ + E
Sbjct: 254 SVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPET 313
Query: 353 TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
+SW++++ G HG + + F+ M + P VT AVLS CSHGGL ++GL+I
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFI-PRDVTFTAVLSACSHGGLVEKGLEI 372
Query: 413 FYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+ +M G+EP+ EHYGC+VD+LGRAG++ EA FI KM +P A I G+LLGAC ++
Sbjct: 373 YENMKKDH-GIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIY 431
Query: 473 SNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSR 523
N ++ VG+ L++++ ++G Y LS + SLRDMM +K V K PG S
Sbjct: 432 KNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSL 491
Query: 524 IELDQVLHTFH-ASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKIL 582
IE+D ++ F D+ HP ++ K +E+ + + GY + DVDEE+KE +
Sbjct: 492 IEIDGKINKFTMGDDQKHPEMGKIRRKWEEILGKIRLIGYKGNTGDAFFDVDEEEKESSI 551
Query: 583 LGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQI 642
HSEKLA+++G++ T G IR++KNLR+C DCH K IS++YGRE+ +RD+NRFH
Sbjct: 552 HMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHF 611
Query: 643 VGGKCSCGDYW 653
G CSC DYW
Sbjct: 612 RNGVCSCRDYW 622
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 213/558 (38%), Positives = 317/558 (56%), Gaps = 46/558 (8%)
Query: 108 RALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMI 167
R+LR G ++H +K +F+ T LI +Y C + AR VFDEM + N+V+W A+I
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
Query: 168 SAYSQRGYASQALNLFVQML-RSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGS 226
+A + + A +F +ML R+ T N
Sbjct: 180 TACFRGNDVAGAREIFDKMLVRNHTSWN-------------------------------- 207
Query: 227 SLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS 286
+L Y K G++ A+ IF +P RD VS + +I G A G E+ FR+L+ GM
Sbjct: 208 VMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSP 267
Query: 287 NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
N V+ VL+A S S + GK +H V ++ V + N+LIDMYS+CGN+ +R +F
Sbjct: 268 NEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVF 327
Query: 347 DTMQE-RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
+ MQE R ++SW +M+ G HG+G E + LF M V PDG++ +++L CSH GL
Sbjct: 328 EGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG-VTPDGISFISLLHACSHAGL 386
Query: 406 EDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSL 465
+ G D F +M +EP+ EHYGC+VDL GR+G++++A++FI +MP PTA +W +L
Sbjct: 387 IEEGEDYFSEMKR-VYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTL 445
Query: 466 LGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMMLKKAVM 516
LGACS H N+++ V RL E++ N+G+ LS DV S+R M+ + +
Sbjct: 446 LGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIK 505
Query: 517 KEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFK-EAGYVPDLSCVLHDVDE 575
K S +E+ + ++ F A ++ E + K+KE+ +R K EAGY P+++ L+DV+E
Sbjct: 506 KTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPEVASALYDVEE 565
Query: 576 EQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRD 635
E+KE + HSEKLAL+F L +G IR++KNLRIC DCH K SK+YG E+ +RD
Sbjct: 566 EEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRD 625
Query: 636 KNRFHQIVGGKCSCGDYW 653
+NRFH G CSC DYW
Sbjct: 626 RNRFHSFKDGSCSCRDYW 643
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 151/325 (46%), Gaps = 28/325 (8%)
Query: 90 HDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDAR 149
H +NA++ C + + + M+ + ++ Y K L A+
Sbjct: 168 HQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTS----WNVMLAGYIKAGELESAK 223
Query: 150 HVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM----- 204
+F EMP R+ VSW+ MI + G +++ F ++ R+G PNE + V S
Sbjct: 224 RIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSG 283
Query: 205 ---LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE-RDVVSCTAII 260
G+ +H + K+ Y V V ++L+DMY++ G + AR +FE + E R +VS T++I
Sbjct: 284 SFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMI 343
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR---- 316
+G A G EEA+ LF ++ G+ + +++ S+L A S ++ G+ + + R
Sbjct: 344 AGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHI 403
Query: 317 -SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWNAMLVGYGKHGEGREVL 374
E+ Y ++D+Y + G L + M T + W +L HG +
Sbjct: 404 EPEIEHY----GCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGN----I 455
Query: 375 ELFTLMREE-NEVKPDGVTMLAVLS 398
EL +++ NE+ P+ L +LS
Sbjct: 456 ELAEQVKQRLNELDPNNSGDLVLLS 480
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 121/279 (43%), Gaps = 21/279 (7%)
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKD--GKIHEARGIFECLPERDVVSCTAIISGYAQ 265
QIH L IK D Y L+ A + AR + C PE D ++ GY++
Sbjct: 23 QIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSE 82
Query: 266 LGLDEEALDLFRQLRGEGMQ-SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
++ +F ++ +G + ++A V+ A+ SL G Q+H L+ + S++
Sbjct: 83 SDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLF 142
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
+ +LI MY CG + ++R++FD M + +++WNA++ + + E+F M N
Sbjct: 143 VGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRN 202
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRA--GR 442
+ +L+G G + IF +M P ++ ++G A G
Sbjct: 203 HTSWN-----VMLAGYIKAGELESAKRIFSEM--------PHRDDVSWSTMIVGIAHNGS 249
Query: 443 VEEAFEFIKKMP---FEPTAAIWGSLLGACSVHSNVDIG 478
E+F + +++ P +L ACS + + G
Sbjct: 250 FNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG 288
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/577 (34%), Positives = 318/577 (55%), Gaps = 20/577 (3%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L M G + + + + L C + +G+ +H ++ + + + L+ +Y K
Sbjct: 333 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 392
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
+ ++R V +MP R+VV+W A+I Y++ +AL F M G N T +V
Sbjct: 393 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 452
Query: 202 XSML---------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERD 252
S G+ +H+ I+ + +++ +V +SL+ MYAK G + ++ +F L R+
Sbjct: 453 LSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN 512
Query: 253 VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN 312
+++ A+++ A G EE L L ++R G+ + +++ L+A + LA L+ G+Q+H
Sbjct: 513 IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHG 572
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
++ + N+ DMYSKCG + ++ R++ SWN ++ G+HG E
Sbjct: 573 LAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEE 632
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
V F M E +KP VT +++L+ CSHGGL D+GL +YDM + G+EP EH C
Sbjct: 633 VCATFHEMLEMG-IKPGHVTFVSLLTACSHGGLVDKGL-AYYDMIARDFGLEPAIEHCIC 690
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
V+DLLGR+GR+ EA FI KMP +P +W SLL +C +H N+D G L ++E +
Sbjct: 691 VIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPED 750
Query: 493 AGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRR 543
Y S DV ++R M K + K+ S ++L + +F DR+HP+
Sbjct: 751 DSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 810
Query: 544 EEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVP 603
E+Y K++++ KE+GYV D S L D DEEQKE L HSE+LAL++ L+STPEG
Sbjct: 811 MEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGST 870
Query: 604 IRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFH 640
+R+ KNLRIC DCH+ K++S++ GR + LRD+ RFH
Sbjct: 871 VRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFH 907
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 174/331 (52%), Gaps = 29/331 (8%)
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR------- 207
MP RN VSW M+S + G + + F +M G +P+ F A++ + GR
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 208 --QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
Q+H + KS + VYV +++L +Y G + +R +FE +P+R+VVS T+++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
G EE +D+++ +RGEG+ N + + V+++ L G+Q+ V++S + S + +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE-EN 384
+NSLI M GN+ Y+ IFD M ER +SWN++ Y ++G E +F+LMR +
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 385 EVKPDGV-TMLAVLSGCSH--GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGR-- 439
EV V T+L+VL H G GL + K+G + CV + L R
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVV-------KMGFDSVV----CVCNTLLRMY 289
Query: 440 --AGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
AGR EA K+MP + + W SL+ +
Sbjct: 290 AGAGRSVEANLVFKQMPTKDLIS-WNSLMAS 319
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 189/369 (51%), Gaps = 13/369 (3%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G+++ ++K+ + + LI + ++ A ++FD+M ER+ +SW ++ +AY+Q
Sbjct: 162 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 221
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIHSLIIKSNYDAHVYV 224
G+ ++ +F M R E N T +T+ S+LG R IH L++K +D+ V V
Sbjct: 222 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 281
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGM 284
++LL MYA G+ EA +F+ +P +D++S ++++ + G +AL L + G
Sbjct: 282 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 341
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
NYVT+ S L A + G+ +H V+ S + ++ N+L+ MY K G ++ SRR
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 345 IFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC-SHG 403
+ M R V++WNA++ GY + + + L F MR E V + +T+++VLS C G
Sbjct: 402 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEG-VSSNYITVVSVLSACLLPG 460
Query: 404 GLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWG 463
L +RG + + S G E + ++ + + G + + + + W
Sbjct: 461 DLLERGKPLHAYIVSA--GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWN 517
Query: 464 SLLGACSVH 472
++L A + H
Sbjct: 518 AMLAANAHH 526
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 182/380 (47%), Gaps = 30/380 (7%)
Query: 106 SKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTA 165
S REG +VH + K+ L V++ T ++ LY + +R VF+EMP+RNVVSWT+
Sbjct: 54 SGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTS 113
Query: 166 MISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSN 217
++ YS +G + ++++ M G NE + + V S LGRQI ++KS
Sbjct: 114 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 173
Query: 218 YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFR 277
++ + V +SL+ M G + A IF+ + ERD +S +I + YAQ G EE+ +F
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 278 QLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCG 337
+R + N T +++L+ L + G+ +H V++ S V + N+L+ MY+ G
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 338 NLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
+ +F M + ++SWN+++ + G + L L M + + VT + L
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK-SVNYVTFTSAL 352
Query: 398 SGCSHGGLEDRG---------LDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
+ C ++G +FY+ G +V + G+ G + E+
Sbjct: 353 AACFTPDFFEKGRILHGLVVVSGLFYNQIIGN-----------ALVSMYGKIGEMSESRR 401
Query: 449 FIKKMPFEPTAAIWGSLLGA 468
+ +MP A W +L+G
Sbjct: 402 VLLQMPRRDVVA-WNALIGG 420
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 319/574 (55%), Gaps = 20/574 (3%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+++L C R L + ++ +M+K ++ +R LI +Y KC + AR VF+ M
Sbjct: 311 SSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMEC 370
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQI 209
++ VSW ++IS Y Q G +A+ LF M+ + + T+ + S+ G+ +
Sbjct: 371 KDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGL 430
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
HS IKS + V ++L+DMYAK G++ ++ IF + D V+ +IS + G
Sbjct: 431 HSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDF 490
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
L + Q+R + + T+ L + LA+ GK++H +LR S + + N+L
Sbjct: 491 ATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNAL 550
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
I+MYSKCG L S R+F+ M R V++W M+ YG +GEG + LE F M E++ + PD
Sbjct: 551 IEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM-EKSGIVPD 609
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF 449
V +A++ CSH GL D GL F M + ++P EHY CVVDLL R+ ++ +A EF
Sbjct: 610 SVVFIAIIYACSHSGLVDEGLACFEKMKT-HYKIDPMIEHYACVVDLLSRSQKISKAEEF 668
Query: 450 IKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDVRSLRDM 509
I+ MP +P A+IW S+L AC +++ V R++E+ + G S +LR
Sbjct: 669 IQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKW 728
Query: 510 ---------MLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEA 560
+ K + K PG S IE+ + +H F + D S P+ E +Y ++ L +
Sbjct: 729 DKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKE 788
Query: 561 GYVPDLSCVLHDV-DEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNF 619
GY+PD V ++ +EE+K +++ GHSE+LA++FGL++T G P++V+KNLR+C DCH
Sbjct: 789 GYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEV 848
Query: 620 AKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
K ISKI GRE+ +RD NRFH G CSC D W
Sbjct: 849 TKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 207/408 (50%), Gaps = 27/408 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +++ C G V+ ++ + +F+ L+ +Y++ L AR VFDEMP
Sbjct: 109 FPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMP 168
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
R++VSW ++IS YS GY +AL ++ ++ S P+ FT ++V G+
Sbjct: 169 VRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQG 228
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H +KS ++ V V + L+ MY K + +AR +F+ + RD VS +I GY +L +
Sbjct: 229 LHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEM 288
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
EE++ +F + + + + +T +SVL A L L K ++N++L++ ++N
Sbjct: 289 VEESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI 347
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
LID+Y+KCG++ +R +F++M+ + +SWN+++ GY + G+ E ++LF +M E +
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEE-QA 406
Query: 389 DGVTMLAVLSGCSH-------GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAG 441
D +T L ++S + GL G+ K G+ ++D+ + G
Sbjct: 407 DHITYLMLISVSTRLADLKFGKGLHSNGI---------KSGICIDLSVSNALIDMYAKCG 457
Query: 442 RVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIE 489
V ++ + M T W +++ AC + G+ V ++ + E
Sbjct: 458 EVGDSLKIFSSMGTGDTVT-WNTVISACVRFGDFATGLQVTTQMRKSE 504
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 192/372 (51%), Gaps = 14/372 (3%)
Query: 106 SKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM-PERNVVSWT 164
S L E +R+HA +I S F +LI Y+ + VF + P +NV W
Sbjct: 16 SSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWN 75
Query: 165 AMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX--------SMLGRQIHSLIIKS 216
++I A+S+ G +AL + ++ S P+++TF +V + +G ++ I+
Sbjct: 76 SIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDM 135
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
+++ ++VG++L+DMY++ G + AR +F+ +P RD+VS ++ISGY+ G EEAL+++
Sbjct: 136 GFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIY 195
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKC 336
+L+ + + T +SVL A L + G+ +H L+S V S VV+ N L+ MY K
Sbjct: 196 HELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKF 255
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
T +RR+FD M R +S+N M+ GY K E + +F + ++ KPD +T+ +V
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF--LENLDQFKPDLLTVSSV 313
Query: 397 LSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE 456
L C H L D L + K G + ++D+ + G + A + M +
Sbjct: 314 LRACGH--LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 457 PTAAIWGSLLGA 468
T + W S++
Sbjct: 372 DTVS-WNSIISG 382
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 7/191 (3%)
Query: 297 ALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ-ERTVM 355
ALS ++L+ +++H V+ + S LID YS S +F + + V
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 356 SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGL-DIFY 414
WN+++ + K+G E LE + +R E++V PD T +V+ C+ GL D + D+ Y
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLR-ESKVSPDKYTFPSVIKACA--GLFDAEMGDLVY 129
Query: 415 DMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSN 474
+ +G E +VD+ R G + A + +MP + W SL+ S H
Sbjct: 130 EQIL-DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNSLISGYSSHGY 187
Query: 475 VDIGVFVGHRL 485
+ + + H L
Sbjct: 188 YEEALEIYHEL 198
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 363 bits (932), Expect = e-100, Method: Compositional matrix adjust.
Identities = 209/566 (36%), Positives = 324/566 (57%), Gaps = 32/566 (5%)
Query: 111 REGQRVHA-HMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
+E QR H +I + +VF+ + L+ +Y K R+A+ V D + E++VV TA+I
Sbjct: 182 KEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIHSLIIKSNYDAH 221
YSQ+G ++A+ F ML +PNE+T+A+V G + IH L++KS +++
Sbjct: 242 YSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESA 301
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
+ +SLL MY + + ++ +F+C+ + VS T++ISG Q G +E AL FR++
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
+ ++ N T +S L S LA + G+Q+H V + + LID+Y KCG
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+R +FDT+ E V+S N M+ Y ++G GRE L+LF M ++P+ VT+L+VL C+
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLG-LQPNDVTVLSVLLACN 480
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAI 461
+ L + G ++F KI + +HY C+VDLLGRAGR+EEA E + P +
Sbjct: 481 NSRLVEEGCELFDSFRKDKIML--TNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVL 537
Query: 462 WGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------------DVRS-LRD 508
W +LL AC VH V++ + ++LEIE G+ G +S +++S ++D
Sbjct: 538 WRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKD 597
Query: 509 MMLKKAVMKEPGRSRIELDQVLHTFHASDR-SHPRREEVYIKVKELSVRFKEAGYVPDLS 567
M LKK P S +E+++ HTF A D SHP E++ ++EL + K+ GYV D S
Sbjct: 598 MKLKK----NPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKS 653
Query: 568 CVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIY 627
CV D++E KE+ L HSEKLA++F + G IR++KNLR+CVDCH++ K +S++
Sbjct: 654 CVFQDMEETAKERSLHQHSEKLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVM 712
Query: 628 GREVSLRDKNRFHQIVGGKCSCGDYW 653
RE+ RD RFH G CSCGDYW
Sbjct: 713 KREIICRDSKRFHHFRDGSCSCGDYW 738
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 199/356 (55%), Gaps = 15/356 (4%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
++ LL +C+ +R++ + + AHM+K+ + P+ ++L+ KC + AR VFD M
Sbjct: 67 NFSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYARQVFDGM 125
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GR 207
ER++V+W ++I+ + + +A+ ++ M+ + P+E+T ++V +
Sbjct: 126 SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ 185
Query: 208 QIHSLIIKSNYD-AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
+ H L + + ++V+VGS+L+DMY K GK EA+ + + + E+DVV TA+I GY+Q
Sbjct: 186 RSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQK 245
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G D EA+ F+ + E +Q N TYASVL + L + +GK +H +++S S + Q
Sbjct: 246 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 305
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHG-EGREVLELFTLMREENE 385
SL+ MY +C + S R+F ++ +SW +++ G ++G E ++E +MR+
Sbjct: 306 TSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD--S 363
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAG 441
+KP+ T+ + L GCS+ + + G I +T K G + K ++DL G+ G
Sbjct: 364 IKPNSFTLSSALRGCSNLAMFEEGRQIHGIVT--KYGFDRDKYAGSGLIDLYGKCG 417
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 169/342 (49%), Gaps = 20/342 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y ++L C + + + G+ +H M+K+ + ++ +T L+ +Y +C + D+ VF +
Sbjct: 270 YASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIE 329
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX------SML--GRQ 208
N VSWT++IS Q G AL F +M+R +PN FT ++ +M GRQ
Sbjct: 330 YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQ 389
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH ++ K +D Y GS L+D+Y K G AR +F+ L E DV+S +I YAQ G
Sbjct: 390 IHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGF 449
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
EALDLF ++ G+Q N VT SVL A + ++ G ++ + + + ++L N
Sbjct: 450 GREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDK----IMLTND 505
Query: 329 ----LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
++D+ + G L + + + ++ W +L H R+V + R+
Sbjct: 506 HYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACKVH---RKVEMAERITRKIL 562
Query: 385 EVKPDGVTMLAVLSGC-SHGGLEDRGLDIFYDMTSGKIGVEP 425
E++P L ++S + G +R +++ M K+ P
Sbjct: 563 EIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNP 604
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 362 bits (929), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/692 (29%), Positives = 345/692 (49%), Gaps = 131/692 (18%)
Query: 91 DMKFKGYNA-------LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M+F G A LL C +K EG+++H ++++ +V + LIV+Y++
Sbjct: 79 EMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNG 138
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
L +R VF+ M +RN+ SW +++S+Y++ GY A+ L +M G +P+ T+ ++ S
Sbjct: 139 KLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLS 198
Query: 204 -------------------------------------------MLGRQIHSLIIKSNYDA 220
LG+ IH I+++
Sbjct: 199 GYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWY 258
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII-------------------- 260
VYV ++L+DMY K G + AR +F+ + +++V+ +++
Sbjct: 259 DVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRME 318
Query: 261 ---------------SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS------ 299
SGYA LG E+ALD+ +++ +G+ N V++ ++ + S
Sbjct: 319 KEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFR 378
Query: 300 ----------------------------GLASLDH-GKQVHNHVLRSEVPSYVVLQNSLI 330
G SL H GK+VH LR + + +L+
Sbjct: 379 NALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALV 438
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
DMY K G+L + IF ++ +++ SWN ML+GY G G E + F++M E ++PD
Sbjct: 439 DMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAG-MEPDA 497
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
+T +VLS C + GL G ++D+ + G+ P EH C+VDLLGR+G ++EA++FI
Sbjct: 498 ITFTSVLSVCKNSGLVQEGWK-YFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFI 556
Query: 451 KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFL---------SX 501
+ M +P A IWG+ L +C +H ++++ RL +E N+ NY +
Sbjct: 557 QTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWE 616
Query: 502 DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAG 561
DV +R++M V + S I++DQ +H F+A ++HP ++Y ++ +L K++G
Sbjct: 617 DVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSG 676
Query: 562 YVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAK 621
YVPD SC+ D+ + +KEK+L+GH+EKLA+++GLI PIRV+KN IC D H AK
Sbjct: 677 YVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAK 736
Query: 622 YISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
Y+S + RE+ L++ R H GKCSC D W
Sbjct: 737 YMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 186/375 (49%), Gaps = 49/375 (13%)
Query: 138 LYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT 197
Y +C SL A +FDEMP+R+ ++W ++ + G +A+ LF +M SG + + T
Sbjct: 32 FYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDST 91
Query: 198 FATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
+ + GRQIH +++ +++V + +SL+ MY+++GK+ +R +F +
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 250 ER-----------------------------------DVVSCTAIISGYAQLGLDEEALD 274
+R D+V+ +++SGYA GL ++A+
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 275 LFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYS 334
+ ++++ G++ + + +S+L A++ L GK +H ++LR+++ V ++ +LIDMY
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 335 KCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTML 394
K G L Y+R +FD M + +++WN+++ G ++ L M +E +KPD +T
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEG-IKPDAITWN 330
Query: 395 AVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP 454
++ SG + G ++ LD+ M + GV P + + + G A + KM
Sbjct: 331 SLASGYATLGKPEKALDVIGKMK--EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ 388
Query: 455 FE---PTAAIWGSLL 466
E P AA +LL
Sbjct: 389 EEGVGPNAATMSTLL 403
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 125/241 (51%), Gaps = 4/241 (1%)
Query: 205 LGRQIHSLIIKSNYD-AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
LG IH +IK D + V S+ + Y + + A +F+ +P+RD ++ I+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
+ G E+A++LFR+++ G ++ T +L S G+Q+H +VLR + S V
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+ NSLI MYS+ G L SR++F++M++R + SWN++L Y K G + + L M E
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM-EI 183
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRV 443
+KPD VT ++LSG + GL + + M G++P ++ + G +
Sbjct: 184 CGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA--GLKPSTSSISSLLQAVAEPGHL 241
Query: 444 E 444
+
Sbjct: 242 K 242
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 360 bits (924), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/545 (39%), Positives = 317/545 (58%), Gaps = 28/545 (5%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPE-RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEP 193
+ Y+K LR+A VF M E R+ VSW +MI AY Q ++AL L+ +M+ G +
Sbjct: 179 FVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKI 238
Query: 194 NEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGK---IHEAR 242
+ FT A+V + L GRQ H +IK+ + + +VGS L+D Y+K G ++++
Sbjct: 239 DMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSE 298
Query: 243 GIFECLPERDVVSCTAIISGYA-QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL 301
+F+ + D+V +ISGY+ L EEA+ FRQ++ G + + ++ V +A S L
Sbjct: 299 KVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNL 358
Query: 302 ASLDHGKQVHNHVLRSEVPSY-VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAM 360
+S KQ+H ++S +PS + + N+LI +Y K GNL +R +FD M E +S+N M
Sbjct: 359 SSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCM 418
Query: 361 LVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGK 420
+ GY +HG G E L L+ M + + P+ +T +AVLS C+H G D G + F M
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLDSG-IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE-T 476
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVF 480
+EP+ EHY C++DLLGRAG++EEA FI MP++P + W +LLGAC H N+ +
Sbjct: 477 FKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAER 536
Query: 481 VGHRLLEIETGNAGNYFFLS---XDVR------SLRDMMLKKAVMKEPGRSRIELDQVLH 531
+ L+ ++ A Y L+ D R S+R M K + K+PG S IE+ + H
Sbjct: 537 AANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKH 596
Query: 532 TFHASDRSHPRREEVYIKVKELSVRFKEAGYVPD--LSCVLHDVDEEQKEKILLGH-SEK 588
F A D SHP EV ++E+ + K+ GYV D + V D E E++ LGH SEK
Sbjct: 597 VFVAEDWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEK 656
Query: 589 LALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCS 648
LA++FGL+ST +G + V+KNLRIC DCHN K++S + GRE+ +RD RFH GKCS
Sbjct: 657 LAVAFGLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCS 716
Query: 649 CGDYW 653
CGDYW
Sbjct: 717 CGDYW 721
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 207/442 (46%), Gaps = 55/442 (12%)
Query: 93 KFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSL------- 145
KFK + LL + V++R L G+ +HA +K+ S +L + LY+KC L
Sbjct: 7 KFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAF 66
Query: 146 -------------------RD-----ARHVFDEMPERNVVSWTAMISAYSQRGYASQALN 181
+D AR +FDE+P+ + VS+ +IS Y+ A+
Sbjct: 67 YSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMV 126
Query: 182 LFVQMLRSGTEPNEFTFATVXSM------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKD 235
LF +M + G E + FT + + + L +Q+H + +D++ V ++ + Y+K
Sbjct: 127 LFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKG 186
Query: 236 GKIHEARGIFECLPE-RDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASV 294
G + EA +F + E RD VS ++I Y Q +AL L++++ +G + + T ASV
Sbjct: 187 GLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASV 246
Query: 295 LTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCG---NLTYSRRIFDTMQE 351
L AL+ L L G+Q H ++++ + + LID YSKCG + S ++F +
Sbjct: 247 LNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILS 306
Query: 352 RTVMSWNAMLVGYGKHGE-GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDR-- 408
++ WN M+ GY + E E ++ F M+ +PD + + V S CS+ +
Sbjct: 307 PDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGH-RPDDCSFVCVTSACSNLSSPSQCK 365
Query: 409 ---GLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSL 465
GL I + S +I V ++ L ++G +++A +MP E A + +
Sbjct: 366 QIHGLAIKSHIPSNRISVN------NALISLYYKSGNLQDARWVFDRMP-ELNAVSFNCM 418
Query: 466 LGACSVHSNVDIGVFVGHRLLE 487
+ + H + + + R+L+
Sbjct: 419 IKGYAQHGHGTEALLLYQRMLD 440
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 16/181 (8%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPS--VFLRTRLIVLYTK 141
QM GH + + + C + + + +++H IK+ ++PS + + LI LY K
Sbjct: 335 QMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS-HIPSNRISVNNALISLYYK 393
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
+L+DAR VFD MPE N VS+ MI Y+Q G+ ++AL L+ +ML SG PN+ TF V
Sbjct: 394 SGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAV 453
Query: 202 XSML--------GRQIHSLI---IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE 250
S G++ + + K +A Y S ++D+ + GK+ EA + +P
Sbjct: 454 LSACAHCGKVDEGQEYFNTMKETFKIEPEAEHY--SCMIDLLGRAGKLEEAERFIDAMPY 511
Query: 251 R 251
+
Sbjct: 512 K 512
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 359 bits (921), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 204/577 (35%), Positives = 308/577 (53%), Gaps = 31/577 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y LL V+ RAL G+++HAH+I+ + + T ++ +Y KC L A+ VFD+M
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMA 246
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
+ V+ T ++ Y+Q G A AL LFV ++ G E + F F+ V LG+Q
Sbjct: 247 VKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQ 306
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH+ + K ++ V VG+ L+D Y K A F+ + E + VS +AIISGY Q+
Sbjct: 307 IHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQ 366
Query: 269 DEEALDLFRQLRGEGMQS-NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
EEA+ F+ LR + N TY S+ A S LA + G QVH ++ + ++
Sbjct: 367 FEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES 426
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
+LI MYSKCG L + +F++M +++W A + G+ +G E L LF M +K
Sbjct: 427 ALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG-MK 485
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
P+ VT +AVL+ CSH GL ++G D K V P +HY C++D+ R+G ++EA
Sbjct: 486 PNSVTFIAVLTACSHAGLVEQGKHCL-DTMLRKYNVAPTIDHYDCMIDIYARSGLLDEAL 544
Query: 448 EFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNY---FFLSX--- 501
+F+K MPFEP A W L C H N+++G G L +++ + Y F L
Sbjct: 545 KFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAG 604
Query: 502 ---DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFK 558
+ + +M ++ + KE S I+ +H F D+ HP+ +E+Y K+KE F
Sbjct: 605 KWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFD-GFM 663
Query: 559 EAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLIST--PEGVPIRVIKNLRICVDC 616
E + + ++ + LL HSE+LA++FGLIS PI+V KNLR C DC
Sbjct: 664 EGD--------MFQCNMTERREQLLDHSERLAIAFGLISVHGNAPAPIKVFKNLRACPDC 715
Query: 617 HNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
H FAK++S + G E+ +RD RFH GKCSC DYW
Sbjct: 716 HEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 202/405 (49%), Gaps = 17/405 (4%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L +M G + Y L C R+L G+ +H M PSV L+ ++ +Y +
Sbjct: 71 LQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCE 130
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
C SL DA +FDEM E N VS T MISAY+++G +A+ LF ML SG +P + T+
Sbjct: 131 CRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTL 190
Query: 202 XSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
L GRQIH+ +I++ ++ + + +++MY K G + A+ +F+ + +
Sbjct: 191 LKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP 250
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
V+CT ++ GY Q G +AL LF L EG++ + ++ VL A + L L+ GKQ+H
Sbjct: 251 VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHAC 310
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREV 373
V + + S V + L+D Y KC + + R F ++E +SW+A++ GY + + E
Sbjct: 311 VAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEA 370
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD-MTSGKIGVEPKKEHYG- 431
++ F +R +N + T ++ CS + G + D + IG + YG
Sbjct: 371 VKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQ-----YGE 425
Query: 432 -CVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNV 475
++ + + G +++A E + M P W + + + + N
Sbjct: 426 SALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNA 469
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV-LRSEVPSYVVLQNSL 329
EA + +++ G+ + +Y + A L SL HG+ +H+ + + E PS V+LQN +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPS-VLLQNCV 124
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
+ MY +C +L + ++FD M E +S M+ Y + G + + LF+ M + P
Sbjct: 125 LQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPS 184
Query: 390 GV 391
+
Sbjct: 185 SM 186
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 357 bits (916), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 202/576 (35%), Positives = 320/576 (55%), Gaps = 38/576 (6%)
Query: 114 QRVHAHMIKTRYL---PSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAY 170
+++HA ++T Y ++FL +++ L + + A VFD + + W +I A
Sbjct: 65 KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRAC 124
Query: 171 SQR-GYASQALNLFVQMLRSG-TEPNEFTFATVXSML--------GRQIHSLIIKSNYDA 220
+ +A L+ +ML G + P++ TF V G+Q+H I+K +
Sbjct: 125 AHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGG 184
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
VYV + L+ +Y G + AR +F+ +PER +VS ++I + G + AL LFR+++
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 281 GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS---EVPSYVVLQNSLIDMYSKCG 337
+ + T SVL+A +GL SL G H +LR +V V+++NSLI+MY KCG
Sbjct: 245 -RSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 338 NLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE-VKPDGVTMLAV 396
+L + ++F MQ+R + SWNAM++G+ HG E + F M ++ E V+P+ VT + +
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 397 LSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE 456
L C+H G ++G ++DM +EP EHYGC+VDL+ RAG + EA + + MP +
Sbjct: 364 LIACNHRGFVNKGRQ-YFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMK 422
Query: 457 PTAAIWGSLLGACSVH-SNVDIGVFVGHRLL------EIETGN-AGNYFFLS-------- 500
P A IW SLL AC ++V++ + ++ E GN +G Y LS
Sbjct: 423 PDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASR 482
Query: 501 -XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
DV +R +M + + KEPG S IE++ + H F A D SHP+ +++Y ++K + R +
Sbjct: 483 WNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLKVIDDRLRS 542
Query: 560 AGYVPDLS--CVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCH 617
GY+PD S ++ ++ KE L HSE+LA++FGLI+ P PIR+ KNLR+C DCH
Sbjct: 543 IGYLPDRSQAPLVDATNDGSKEYSLRLHSERLAIAFGLINLPPQTPIRIFKNLRVCNDCH 602
Query: 618 NFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
K ISK++ E+ +RD+ RFH G CSC DYW
Sbjct: 603 EVTKLISKVFNTEIIVRDRVRFHHFKDGSCSCLDYW 638
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 152/291 (52%), Gaps = 16/291 (5%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L C EG++VH ++K + V++ LI LY C L AR VFDEMPER+
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHS 211
+VSW +MI A + G AL LF +M RS EP+ +T +V S LG H+
Sbjct: 217 LVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHA 275
Query: 212 LII-KSNYDA--HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
++ K + D V V +SL++MY K G + A +F+ + +RD+ S A+I G+A G
Sbjct: 276 FLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGR 335
Query: 269 DEEALDLFRQL--RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE-VPSYVVL 325
EEA++ F ++ + E ++ N VT+ +L A + ++ G+Q + ++R + +
Sbjct: 336 AEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEH 395
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERT-VMSWNAMLVGYGKHGEGREVLE 375
++D+ ++ G +T + + +M + + W ++L K G E+ E
Sbjct: 396 YGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSE 446
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 196/571 (34%), Positives = 311/571 (54%), Gaps = 19/571 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+ C + + EG++ H +K + F+R L+ +Y+ C +A V D++P +
Sbjct: 142 VFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCD 201
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHS 211
+ +++ +S Y + G + L++ + N T+ + + L Q+HS
Sbjct: 202 LSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHS 261
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
+++ ++A V +L++MY K GK+ A+ +F+ +++ T I+ Y Q EE
Sbjct: 262 RMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEE 321
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL+LF ++ + + N T+A +L +++ L+ L G +H VL+S ++V++ N+L++
Sbjct: 322 ALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVN 381
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
MY+K G++ +R+ F M R +++WN M+ G HG GRE LE F M E+ P+ +
Sbjct: 382 MYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEI-PNRI 440
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
T + VL CSH G ++GL F + K V+P +HY C+V LL +AG ++A +F++
Sbjct: 441 TFIGVLQACSHIGFVEQGLHYFNQLMK-KFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMR 499
Query: 452 KMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------D 502
P E W +LL AC V N +G V +E ++G Y LS
Sbjct: 500 TAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEG 559
Query: 503 VRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGY 562
V +R +M + V KEPG S I + H F A D HP +Y KVKE+ + K GY
Sbjct: 560 VAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGY 619
Query: 563 VPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKY 622
PD++ HDVDEEQ+E L HSEKLA+++GLI TPE P+ V KN+RIC DCH+ K
Sbjct: 620 SPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKL 679
Query: 623 ISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
ISKI R + +RD NRFH + G+CSC DYW
Sbjct: 680 ISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 185/390 (47%), Gaps = 22/390 (5%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRY---LPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
N LL C + LR G+ +HAH+I T + LI LY KC AR +FD
Sbjct: 35 NELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDL 94
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXSML-------- 205
MPERNVVSW AM+ Y G+ + L LF M SG + PNEF V
Sbjct: 95 MPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE 154
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
G+Q H +K +H +V ++L+ MY+ EA + + LP D+ ++ +SGY +
Sbjct: 155 GKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLE 214
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
G +E LD+ R+ E N +TY S L S L L+ QVH+ ++R + V
Sbjct: 215 CGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEA 274
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
+LI+MY KCG + Y++R+FD + + ++ Y + E L LF+ M + E
Sbjct: 275 CGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKM-DTKE 333
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY---GCVVDLLGRAGR 442
V P+ T +L+ + L +G D+ G + + H +V++ ++G
Sbjct: 334 VPPNEYTFAILLNSIAELSLLKQG-----DLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388
Query: 443 VEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+E+A + M F W +++ CS H
Sbjct: 389 IEDARKAFSGMTFRDIVT-WNTMISGCSHH 417
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 207/583 (35%), Positives = 315/583 (54%), Gaps = 39/583 (6%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLI--VLYTKCDSLRDARHVFDEMPE 157
++ +CVS +++ Q +H + + S FLR+RL+ + L A +F +P+
Sbjct: 9 MIQKCVSFSQIKQLQ---SHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPK 65
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQML----------RSGTEPNEFTFATVXSMLGR 207
W A+I ++ + S A + + ML R FT L
Sbjct: 66 PLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCS 125
Query: 208 ----QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
Q+H I + A + ++LLD Y+K+G + A +F+ +P RDV S A+I+G
Sbjct: 126 SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGL 185
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
EA++L++++ EG++ + VT + L A S L + G+ ++ V
Sbjct: 186 VSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGE----NIFHGYSNDNV 241
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
++ N+ IDMYSKCG + + ++F+ +++V++WN M+ G+ HGE LE+F + E
Sbjct: 242 IVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL-E 300
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR 442
+N +KPD V+ LA L+ C H GL + GL +F +M GVE +HYGCVVDLL RAGR
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK--GVERNMKHYGCVVDLLSRAGR 358
Query: 443 VEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS-- 500
+ EA + I M P +W SLLGA ++S+V++ + E+ N G++ LS
Sbjct: 359 LREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNV 418
Query: 501 -------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKEL 553
DV +RD M K V K PG S IE +H F+ SD+SH + E+Y K+ E+
Sbjct: 419 YAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEI 478
Query: 554 SVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLI---STPEGVPIRVIKNL 610
+ +E GYV VLHD+ EE+KE L HSEKLA+++GL+ E P+RVI NL
Sbjct: 479 RFKIREDGYVAQTGLVLHDIGEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNL 538
Query: 611 RICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
RIC DCH K+ISKIY RE+ +RD+ RFH+ G CSC D+W
Sbjct: 539 RICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 195/506 (38%), Positives = 293/506 (57%), Gaps = 57/506 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ ++L+ C + +G +VH+ + K+ +L V++ + L+ +Y+KC ++ DA+ VFDEM
Sbjct: 155 FASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG 214
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
+RNVVSW ++I+ + Q G A +AL++F ML S EP+E T A+V S +G++
Sbjct: 215 DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQE 274
Query: 209 IHSLIIKSN-YDAHVYVGSSLLDMYAKDGKIHEARGIFECLP------------------ 249
+H ++K++ + + ++ +DMYAK +I EAR IF+ +P
Sbjct: 275 VHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAA 334
Query: 250 -------------ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
ER+VVS A+I+GY Q G +EEAL LF L+ E + + ++A++L
Sbjct: 335 STKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILK 394
Query: 297 ALSGLASLDHGKQVHNHVLR------SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ 350
A + LA L G Q H HVL+ S + + NSLIDMY KCG + +F M
Sbjct: 395 ACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMM 454
Query: 351 ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGL 410
ER +SWNAM++G+ ++G G E LELF M E E KPD +TM+ VLS C H G + G
Sbjct: 455 ERDCVSWNAMIIGFAQNGYGNEALELFREMLESGE-KPDHITMIGVLSACGHAGFVEEGR 513
Query: 411 DIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACS 470
F MT GV P ++HY C+VDLLGRAG +EEA I++MP +P + IWGSLL AC
Sbjct: 514 HYFSSMTR-DFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACK 572
Query: 471 VHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGR 521
VH N+ +G +V +LLE+E N+G Y LS DV ++R M K+ V K+PG
Sbjct: 573 VHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGC 632
Query: 522 SRIELDQVLHTFHASDRSHPRREEVY 547
S I++ H F D+SHPR+++++
Sbjct: 633 SWIKIQGHDHVFMVKDKSHPRKKQIH 658
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 230/447 (51%), Gaps = 80/447 (17%)
Query: 97 YNALLNECV-SKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
+ LL+ C+ SK + + VHA +IK+ + +F++ RLI Y+KC SL D R VFD+M
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 156 PERNV-------------------------------VSWTAMISAYSQRGYASQALNLFV 184
P+RN+ +W +M+S ++Q +AL F
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 185 QMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDG 236
M + G NE++FA+V S G Q+HSLI KS + + VY+GS+L+DMY+K G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 237 KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
+++A+ +F+ + +R+VVS ++I+ + Q G EALD+F+ + ++ + VT ASV++
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVIS 261
Query: 297 ALSGLASLDHGKQVHNHVLRSE-VPSYVVLQNSLIDMYSKCGNLTYSRRIFDT------- 348
A + L+++ G++VH V++++ + + ++L N+ +DMY+KC + +R IFD+
Sbjct: 262 ACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVI 321
Query: 349 ------------------------MQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
M ER V+SWNA++ GY ++GE E L LF L++ E+
Sbjct: 322 AETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRES 381
Query: 385 EVKPDGVTMLAVLSGCS-----HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGR 439
V P + +L C+ H G++ + + + G E ++D+ +
Sbjct: 382 -VCPTHYSFANILKACADLAELHLGMQAH-VHVLKHGFKFQSGEEDDIFVGNSLIDMYVK 439
Query: 440 AGRVEEAFEFIKKMPFEPTAAIWGSLL 466
G VEE + +KM E W +++
Sbjct: 440 CGCVEEGYLVFRKM-MERDCVSWNAMI 465
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 356 bits (913), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 204/575 (35%), Positives = 310/575 (53%), Gaps = 25/575 (4%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
A + CVS R +H ++K+ F+ +L+ Y + A +FDEMPER
Sbjct: 39 AAVKSCVSIELCR---LLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPER 95
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRS--GTEPNEFTFATVXSML--------GRQ 208
++VSW ++IS YS RGY + + +M+ S G PNE TF ++ S GR
Sbjct: 96 DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRC 155
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH L++K V V ++ ++ Y K G + + +FE L +++VS +I + Q GL
Sbjct: 156 IHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGL 215
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
E+ L F R G + + T+ +VL + + + + +H ++ + +
Sbjct: 216 AEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA 275
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
L+D+YSK G L S +F + M+W AML Y HG GR+ ++ F LM + P
Sbjct: 276 LLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYG-ISP 334
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D VT +L+ CSH GL + G F M S + ++P+ +HY C+VDLLGR+G +++A+
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGKHYFETM-SKRYRIDPRLDHYSCMVDLLGRSGLLQDAYG 393
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS-------- 500
IK+MP EP++ +WG+LLGAC V+ + +G RL E+E + NY LS
Sbjct: 394 LIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGL 453
Query: 501 -XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFK- 558
D +R++M +K +++ G S IE +H F D SHP E++ K+KE+ + K
Sbjct: 454 WKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEIRKKMKS 513
Query: 559 EAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHN 618
E GY VLHDV E+ KE+++ HSEK+A++FGL+ PI + KNLRIC DCH
Sbjct: 514 EMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRICGDCHE 573
Query: 619 FAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
AK IS I R + +RD RFH + G CSC DYW
Sbjct: 574 TAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 56/310 (18%)
Query: 77 HLQQPLLQMALC--------GHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPS 128
HLQ L + L GH+ + A+L C +R Q +H ++ + +
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 129 VFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLR 188
+ T L+ LY+K L D+ VF E+ + ++WTAM++AY+ G+ A+ F M+
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 189 SGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL 248
G P+ TF + LL+ + G + E + FE +
Sbjct: 330 YGISPDHVTF---------------------------THLLNACSHSGLVEEGKHYFETM 362
Query: 249 PER-------DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL 301
+R D SC + G + GL ++A L +++ M+ + + ++L A
Sbjct: 363 SKRYRIDPRLDHYSCMVDLLGRS--GLLQDAYGLIKEMP---MEPSSGVWGALLGACRVY 417
Query: 302 ASLDHGKQVHNHVLRSEV---PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWN 358
G + + E +YV+L N +YS G + RI + M+++ ++
Sbjct: 418 KDTQLGTKAAERLFELEPRDGRNYVMLSN----IYSASGLWKDASRIRNLMKQKGLV--R 471
Query: 359 AMLVGYGKHG 368
A Y +HG
Sbjct: 472 ASGCSYIEHG 481
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 285 QSNYV-----TYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNL 339
QS++V +S++ A+ S++ + +H V++S + + + L+ Y + G+
Sbjct: 23 QSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHD 82
Query: 340 TYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT-LMREENEVKPDGVTMLAVLS 398
+ ++FD M ER ++SWN+++ GY G + E+ + +M E +P+ VT L+++S
Sbjct: 83 VCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMIS 142
Query: 399 GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPT 458
C +GG ++ G I + K GV + + ++ G+ G + + + + + +
Sbjct: 143 ACVYGGSKEEGRCIHGLVM--KFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNL 200
Query: 459 AAIWGSLL 466
+ W +++
Sbjct: 201 VS-WNTMI 207
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 198/558 (35%), Positives = 313/558 (56%), Gaps = 22/558 (3%)
Query: 111 REGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAY 170
R G+ +HA++I T + + + L +Y S R+A +F M +++VSWT MIS Y
Sbjct: 314 RLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGY 373
Query: 171 SQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHV 222
+A++ + M + +P+E T A V S G ++H L IK+ ++V
Sbjct: 374 EYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYV 433
Query: 223 YVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE 282
V ++L++MY+K I +A IF +P ++V+S T+II+G EAL RQ++
Sbjct: 434 IVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT 493
Query: 283 GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYS 342
+Q N +T + L A + + +L GK++H HVLR+ V L N+L+DMY +CG + +
Sbjct: 494 -LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTA 552
Query: 343 RRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH 402
F++ Q++ V SWN +L GY + G+G V+ELF M ++ V+PD +T +++L GCS
Sbjct: 553 WSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRM-VKSRVRPDEITFISLLCGCSK 610
Query: 403 GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIW 462
+ +GL F M GV P +HY CVVDLLGRAG ++EA +FI+KMP P A+W
Sbjct: 611 SQMVRQGLMYFSKMED--YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVW 668
Query: 463 GSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKK 513
G+LL AC +H +D+G + E++ + G Y L +V +R MM +
Sbjct: 669 GALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKEN 728
Query: 514 AVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDV 573
+ + G S +E+ +H F + D+ HP+ +E+ ++ + E G D
Sbjct: 729 GLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMDE 788
Query: 574 DEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSL 633
E +++I GHSE+ A++FGLI+T G+PI V KNL +C +CH+ K+ISK RE+S+
Sbjct: 789 TEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREISV 848
Query: 634 RDKNRFHQIVGGKCSCGD 651
RD FH G+CSCGD
Sbjct: 849 RDAEHFHHFKDGECSCGD 866
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 206/385 (53%), Gaps = 21/385 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ AL+ C KRA EG +V++ + + V L + ++ + +L DA +VF +M
Sbjct: 97 FVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMS 156
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLR-SGTEPNEFTFATVXSMLG--------R 207
ERN+ SW ++ Y+++GY +A+ L+ +ML G +P+ +TF V G +
Sbjct: 157 ERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGK 216
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
++H +++ Y+ + V ++L+ MY K G + AR +F+ +P RD++S A+ISGY + G
Sbjct: 217 EVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENG 276
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
+ E L+LF +RG + + +T SV++A L G+ +H +V+ + + + N
Sbjct: 277 MCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN 336
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
SL MY G+ + ++F M+ + ++SW M+ GY + + ++ + +M +++ VK
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMM-DQDSVK 395
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCV----VDLLGRAGRV 443
PD +T+ AVLS C+ G D G+++ K+ ++ + Y V +++ + +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELH------KLAIKARLISYVIVANNLINMYSKCKCI 449
Query: 444 EEAFEFIKKMPFEPTAAIWGSLLGA 468
++A + +P + + W S++
Sbjct: 450 DKALDIFHNIPRKNVIS-WTSIIAG 473
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 352 bits (902), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 206/584 (35%), Positives = 323/584 (55%), Gaps = 28/584 (4%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYL--PSVF--LRTRLIVLYTKCDSLRDARHV 151
G + LL+ VS +++HA +++T + VF +RL + D R V
Sbjct: 10 GDDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCR-V 68
Query: 152 FDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEP-----NEFTFATVXS--- 203
F + + MI A+S + LF + R+ + P + F
Sbjct: 69 FSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGD 128
Query: 204 -MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 262
+ G QIH I + + + ++L+D+Y+ +A +F+ +P+RD VS + S
Sbjct: 129 LLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSC 188
Query: 263 YAQLGLDEEALDLFRQLRGE---GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
Y + + L LF +++ + ++ + VT L A + L +LD GKQVH+ + + +
Sbjct: 189 YLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 248
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTL 379
+ L N+L+ MYS+CG++ + ++F M+ER V+SW A++ G +G G+E +E F
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 308
Query: 380 MREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGR 439
M + + P+ T+ +LS CSH GL G+ F M SG+ ++P HYGCVVDLLGR
Sbjct: 309 MLKFG-ISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR 367
Query: 440 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFL 499
A +++A+ IK M +P + IW +LLGAC VH +V++G V L+E++ AG+Y L
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLL 427
Query: 500 ---------SXDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKV 550
V LR +M +K + +PG S IEL +H F D SHPR+EE+Y +
Sbjct: 428 LNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKML 487
Query: 551 KELSVRFKEAGYVPDLSCVLHDVD-EEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKN 609
E++ + K AGYV +++ LH+++ EE+K L HSEKLA++FG++ TP G IRV KN
Sbjct: 488 AEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKN 547
Query: 610 LRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
LR CVDCHNFAK++S +Y R V +RD++RFH GG CSC D+W
Sbjct: 548 LRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 214/568 (37%), Positives = 309/568 (54%), Gaps = 32/568 (5%)
Query: 116 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGY 175
+H +K + F L++ Y K + AR +FDEM E NVVSWT++IS Y+ G
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 176 ASQALNLFVQMLRS-GTEPNEFTFATV--------XSMLGRQIHSLIIKSNYDAHVYVGS 226
AL++F +M PNE+TFA+V S +G+ IH+ + S ++ V S
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 227 SLLDMYAKDGKIHEARGIFECLPE--RDVVSCTAIISGYAQLGLDEEALDLFRQLRGE-- 282
SL+DMY K + AR +F+ + R+VVS T++I+ YAQ EA++LFR
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 283 GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYS 342
++N ASV++A S L L GK H V R S V+ SL+DMY+KCG+L+ +
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 343 RRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH 402
+IF ++ +V+S+ +M++ KHG G ++LF M + P+ VT+L VL CSH
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEM-VAGRINPNYVTLLGVLHACSH 349
Query: 403 GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPF--EPTAA 460
GL + GL+ + + + K GV P HY CVVD+LGR GRV+EA+E K + E A
Sbjct: 350 SGLVNEGLE-YLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGAL 408
Query: 461 IWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMML 511
+WG+LL A +H V+I RL++ Y LS D SLR M
Sbjct: 409 LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMK 468
Query: 512 KKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGY------VPD 565
+ +KE S IE ++ FHA D S E+ +K+L R KE G+ +
Sbjct: 469 RSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERGHRGSSSMITT 528
Query: 566 LSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISK 625
S V DVDEE K++++ H E+LAL++GL+ P G IR++ NLR+C DCH K IS+
Sbjct: 529 SSSVFVDVDEEAKDEMVSLHCERLALAYGLLHLPAGSTIRIMNNLRMCRDCHEAFKLISE 588
Query: 626 IYGREVSLRDKNRFHQIVGGKCSCGDYW 653
I RE+ +RD NRFH G C+C DYW
Sbjct: 589 IVEREIVVRDVNRFHCFKNGSCTCRDYW 616
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 156/331 (47%), Gaps = 25/331 (7%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ ++ C + R G+ +HA + + ++ + + L+ +Y KC+ + AR VFD M
Sbjct: 134 FASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 157 --ERNVVSWTAMISAYSQRGYASQALNLF--VQMLRSGTEPNEFTFATVXS--------M 204
RNVVSWT+MI+AY+Q +A+ LF + N+F A+V S
Sbjct: 194 GYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ 253
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYA 264
G+ H L+ + Y+++ V +SLLDMYAK G + A IF + V+S T++I A
Sbjct: 254 WGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKA 313
Query: 265 QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
+ GL E A+ LF ++ + NYVT VL A S ++ G + L Y V
Sbjct: 314 KHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLE----YLSLMAEKYGV 369
Query: 325 LQNS-----LIDMYSKCGNLTYSRRIFDTMQ---ERTVMSWNAMLVGYGKHGEGREVLEL 376
+ +S ++DM + G + + + T++ E+ + W A+L HG V E
Sbjct: 370 VPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEA 429
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLED 407
+ + N+ L+ S GG ED
Sbjct: 430 SKRLIQSNQQVTSAYIALSNAYAVS-GGWED 459
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 188/561 (33%), Positives = 304/561 (54%), Gaps = 62/561 (11%)
Query: 88 CGHDMKFKG-------YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYT 140
C D++ +G + ++L C S A R G +VH ++K+ + ++++++ LI +Y
Sbjct: 214 CFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYA 273
Query: 141 KCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFAT 200
KC + AR + + M +VVSW +MI ++G +AL++F +M + ++FT +
Sbjct: 274 KCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPS 333
Query: 201 VXSM---------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
+ + + H LI+K+ Y + V ++L+DMYAK G + A +FE + E+
Sbjct: 334 ILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEK 393
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVH 311
DV+S TA+++G G +EAL LF +R G+ + + ASVL+A + L L+ G+QVH
Sbjct: 394 DVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVH 453
Query: 312 NHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGR 371
+ ++S PS + + NSL+ MY+KCG+L + IF++M+ R +++W ++VGY K+G
Sbjct: 454 GNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLE 513
Query: 372 EVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG 431
+ F MR G+ P EHY
Sbjct: 514 DAQRYFDSMRT-------------------------------------VYGITPGPEHYA 536
Query: 432 CVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETG 491
C++DL GR+G + + + +M EP A +W ++L A H N++ G L+E+E
Sbjct: 537 CMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPN 596
Query: 492 NAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPR 542
NA Y LS + ++R +M + + KEPG S +E +H+F + DR HPR
Sbjct: 597 NAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPR 656
Query: 543 REEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGV 602
E+Y KV E+ + KEAGY D+S LHD+D+E KE L HSEKLA++FGL+ P G
Sbjct: 657 MVEIYSKVDEMMLLIKEAGYFADMSFALHDLDKEGKELGLAYHSEKLAVAFGLLVVPSGA 716
Query: 603 PIRVIKNLRICVDCHNFAKYI 623
PIR+IKNLR+C DCH+ K +
Sbjct: 717 PIRIIKNLRVCGDCHSAMKLL 737
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 188/346 (54%), Gaps = 12/346 (3%)
Query: 130 FLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRS 189
F +IV Y+ L DA +F P +N +SW A+IS Y + G +A NLF +M
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 190 GTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEA 241
G +PNE+T +V M G QIH IK+ +D V V + LL MYA+ +I EA
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEA 179
Query: 242 RGIFECLP-ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSG 300
+FE + E++ V+ T++++GY+Q G +A++ FR LR EG QSN T+ SVLTA +
Sbjct: 180 EYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACAS 239
Query: 301 LASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAM 360
+++ G QVH +++S + + +Q++LIDMY+KC + +R + + M+ V+SWN+M
Sbjct: 240 VSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSM 299
Query: 361 LVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGK 420
+VG + G E L +F M E ++K D T+ ++L+ + E + + + K
Sbjct: 300 IVGCVRQGLIGEALSMFGRMHER-DMKIDDFTIPSILNCFALSRTEMKIASSAHCLIV-K 357
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
G K +VD+ + G ++ A + + M E W +L+
Sbjct: 358 TGYATYKLVNNALVDMYAKRGIMDSALKVFEGM-IEKDVISWTALV 402
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 192/358 (53%), Gaps = 13/358 (3%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP-E 157
++L C S L G+++H H IKT + V + L+ +Y +C + +A ++F+ M E
Sbjct: 130 SVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGE 189
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQI 209
+N V+WT+M++ YSQ G+A +A+ F + R G + N++TF +V + +G Q+
Sbjct: 190 KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQV 249
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H I+KS + ++YV S+L+DMYAK ++ AR + E + DVVS ++I G + GL
Sbjct: 250 HCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLI 309
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALS-GLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
EAL +F ++ M+ + T S+L + + H ++++ +Y ++ N+
Sbjct: 310 GEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNA 369
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
L+DMY+K G + + ++F+ M E+ V+SW A++ G +G E L+LF MR + P
Sbjct: 370 LVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMR-VGGITP 428
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
D + +VLS + L + G + + K G +V + + G +E+A
Sbjct: 429 DKIVTASVLSASAELTLLEFGQQVHGNYI--KSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 66/130 (50%), Gaps = 12/130 (9%)
Query: 307 GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGK 366
G +H++ R+++ S N L+ SK G + +R++FD M ER +WN M+V Y
Sbjct: 17 GSCIHSYADRTKLHS-----NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSN 71
Query: 367 HGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPK 426
+ +LF N VK + ++ A++SG G + ++F++M S G++P
Sbjct: 72 SRRLSDAEKLF----RSNPVK-NTISWNALISGYCKSGSKVEAFNLFWEMQSD--GIKPN 124
Query: 427 KEHYGCVVDL 436
+ G V+ +
Sbjct: 125 EYTLGSVLRM 134
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 339 bits (869), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 189/554 (34%), Positives = 294/554 (53%), Gaps = 46/554 (8%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER----NVVSWTAMIS 168
G+ +HA +K F+R L+ +Y K L+ A VF+E P+R +++ W +I+
Sbjct: 145 GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLIN 204
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSL 228
Y + ++ +++ + RS E N +++T L
Sbjct: 205 GYCR----AKDMHMATTLFRSMPERNSGSWST---------------------------L 233
Query: 229 LDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNY 288
+ Y G+++ A+ +FE +PE++VVS T +I+G++Q G E A+ + ++ +G++ N
Sbjct: 234 IKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNE 293
Query: 289 VTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
T A+VL+A S +L G ++H ++L + + + +L+DMY+KCG L + +F
Sbjct: 294 YTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN 353
Query: 349 MQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDR 408
M + ++SW AM+ G+ HG + ++ F M E KPD V LAVL+ C + D
Sbjct: 354 MNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGE-KPDEVVFLAVLTACLNSSEVDL 412
Query: 409 GLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
GL+ F+D +EP +HY VVDLLGRAG++ EA E ++ MP P W +L A
Sbjct: 413 GLN-FFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRA 471
Query: 469 CSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEP 519
C H V LLE++ G+Y FL DV R + K+ +
Sbjct: 472 CKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSL 531
Query: 520 GRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKE 579
G S IELD L+ F A D SH +E+ +K+ E+ + GY P +HD++EE+KE
Sbjct: 532 GWSYIELDGQLNKFSAGDYSHKLTQEIGLKLDEIISLAIQKGYNPGADWSIHDIEEEEKE 591
Query: 580 KILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRF 639
+ HSEKLAL+ G + T G IR+IKNLRIC DCH+ KY+SKI R++ LRD +F
Sbjct: 592 NVTGIHSEKLALTLGFLRTAPGTTIRIIKNLRICGDCHSLMKYVSKISQRDILLRDARQF 651
Query: 640 HQIVGGKCSCGDYW 653
H G+CSCGDYW
Sbjct: 652 HHFKDGRCSCGDYW 665
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
A+L+ C AL G R+H +++ + T L+ +Y KC L A VF M +
Sbjct: 298 AVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHK 357
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIH 210
+++SWTAMI ++ G QA+ F QM+ SG +P+E F V + LG
Sbjct: 358 DILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFF 417
Query: 211 SLI-----IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
+ I+ +V V +D+ + GK++EA + E +P
Sbjct: 418 DSMRLDYAIEPTLKHYVLV----VDLLGRAGKLNEAHELVENMP 457
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 126/333 (37%), Gaps = 97/333 (29%)
Query: 244 IFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLAS 303
IF ER+ A+I G + E ++ F + G++ + +T+ VL + S L
Sbjct: 82 IFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGF 141
Query: 304 LDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD---------------- 347
G+ +H L++ V ++ SL+DMY+K G L ++ ++F+
Sbjct: 142 RWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNV 201
Query: 348 -------------------TMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV-- 386
+M ER SW+ ++ GY GE +LF LM E+N V
Sbjct: 202 LINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSW 261
Query: 387 ----------------------------KPDGVTMLAVLSGCS-----------HGGLED 407
KP+ T+ AVLS CS HG + D
Sbjct: 262 TTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 408 RGLDIFYDMTSGKIGVEPKKEHYGCVV---------DLLGRA---------GRVEEAFEF 449
G+ + + + + + K C D+L GR +A +
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQC 381
Query: 450 IKKMPF---EPTAAIWGSLLGACSVHSNVDIGV 479
++M + +P ++ ++L AC S VD+G+
Sbjct: 382 FRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGL 414
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 333 bits (854), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 314/579 (54%), Gaps = 33/579 (5%)
Query: 100 LLNECVSKRALREGQRVHAHMIKT--RYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM-P 156
+L C S + LR ++H+H+I ++ PS+F + SL A+ +FD
Sbjct: 11 MLQGCNSMKKLR---KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDS 67
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXSMLGR-------- 207
+ + W +I +S ++ + +ML S + P+ FTF R
Sbjct: 68 DPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCL 127
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
+IH +I+S + V +SL+ Y+ +G + A +F+ +P RD+VS +I ++ +G
Sbjct: 128 EIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVG 187
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
L +AL +++++ EG+ + T ++L++ + +++L+ G +H S V + N
Sbjct: 188 LHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSN 247
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
+LIDMY+KCG+L + +F+ M++R V++WN+M++GYG HG G E + F M V+
Sbjct: 248 ALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASG-VR 306
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
P+ +T L +L GCSH GL G++ F ++ S + + P +HYGC+VDL GRAG++E +
Sbjct: 307 PNAITFLGLLLGCSHQGLVKEGVEHF-EIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSL 365
Query: 448 EFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------ 501
E I +W +LLG+C +H N+++G +L+++E NAG+Y ++
Sbjct: 366 EMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAAN 425
Query: 502 ---DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFK 558
S+R ++ + PG S IE+ +H F D+ HP +Y ++ E+ R
Sbjct: 426 DAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAI 485
Query: 559 EAGYVPDLSCVLHDVDEEQKEKIL----LGHSEKLALSFGLISTPEGVPIRVIKNLRICV 614
AGY P+ S + ++ L HSEKLA+++GL+ T G +R+ KNLR+C
Sbjct: 486 LAGYKPEDS---NRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCR 542
Query: 615 DCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
DCH+F KY+SK + RE+ +RD+ RFH G CSC DYW
Sbjct: 543 DCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 138/276 (50%), Gaps = 12/276 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+N L C +++ + +H +I++ +L + T L+ Y+ S+ A VFDEMP
Sbjct: 110 FNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMP 169
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
R++VSW MI +S G +QAL+++ +M G + +T + S +G
Sbjct: 170 VRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVM 229
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H + ++ V+V ++L+DMYAK G + A G+F + +RDV++ ++I GY G
Sbjct: 230 LHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGH 289
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE--VPSYVVLQ 326
EA+ FR++ G++ N +T+ +L S + G + H ++ S+ + V
Sbjct: 290 GVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVE-HFEIMSSQFHLTPNVKHY 348
Query: 327 NSLIDMYSKCGNLTYS-RRIFDTMQERTVMSWNAML 361
++D+Y + G L S I+ + + W +L
Sbjct: 349 GCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 333 bits (853), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 170/492 (34%), Positives = 283/492 (57%), Gaps = 18/492 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+++LL L +++H ++++ +FL + LI Y KC + A+++F +
Sbjct: 343 FSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCN 402
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
+VV +TAMIS Y G +L +F +++ PNE T ++ + LGR+
Sbjct: 403 SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE 462
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H IIK +D +G +++DMYAK G+++ A IFE L +RD+VS ++I+ AQ
Sbjct: 463 LHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDN 522
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
A+D+FRQ+ G+ + V+ ++ L+A + L S GK +H +++ + S V +++
Sbjct: 523 PSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSEST 582
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
LIDMY+KCGNL + +F TM+E+ ++SWN+++ G HG+ ++ L LF M E++ ++P
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRP 642
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D +T L ++S C H G D G+ F MT G++P++EHY CVVDL GRAGR+ EA+E
Sbjct: 643 DQITFLEIISSCCHVGDVDEGVRFFRSMTE-DYGIQPQQEHYACVVDLFGRAGRLTEAYE 701
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------- 501
+K MPF P A +WG+LLGAC +H NV++ +L++++ N+G Y +S
Sbjct: 702 TVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANARE 761
Query: 502 --DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
V +R +M ++ V K PG S IE+++ H F + D +HP +Y + L +
Sbjct: 762 WESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRL 821
Query: 560 AGYVPDLSCVLH 571
GY+P LH
Sbjct: 822 EGYIPQPYLPLH 833
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 180/365 (49%), Gaps = 36/365 (9%)
Query: 130 FLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRS 189
F+ + LI Y + + +FD + +++ V W M++ Y++ G + F M
Sbjct: 174 FVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 190 GTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEA 241
PN TF V S+ LG Q+H L++ S D + +SLL MY+K G+ +A
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 242 RGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL 301
+F + D V+ +ISGY Q GL EE+L F ++ G+ + +T++S+L ++S
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 302 ASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAML 361
+L++ KQ+H +++R + + L ++LID Y KC ++ ++ IF V+ + AM+
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 362 VGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS-----------HGGLEDRGL 410
GY +G + LE+F + + ++ P+ +T++++L HG + +G
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKV-KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGF 472
Query: 411 DIFYDMTSGKIGVEPKKEHYGC-VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 469
D + + GC V+D+ + GR+ A+E +++ + W S++ C
Sbjct: 473 D--------------NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVS-WNSMITRC 517
Query: 470 SVHSN 474
+ N
Sbjct: 518 AQSDN 522
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 152/312 (48%), Gaps = 11/312 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER- 158
LL C + LR+G++VHA +I + R++ +Y C S D +F + R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 159 -NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF-------ATVXSMLGRQIH 210
++ W ++IS++ + G +QAL + +ML G P+ TF + + G
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 211 SLIIKS-NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
S + S D + +V SSL+ Y + GKI +F+ + ++D V +++GYA+ G
Sbjct: 161 SDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGAL 220
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
+ + F +R + + N VT+ VL+ + +D G Q+H V+ S V ++NSL
Sbjct: 221 DSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSL 280
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
+ MYSKCG + ++F M ++WN M+ GY + G E L F M V PD
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG-VLPD 339
Query: 390 GVTMLAVLSGCS 401
+T ++L S
Sbjct: 340 AITFSSLLPSVS 351
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
QM + G +A L+ C + + G+ +H MIK V+ + LI +Y KC
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCG 591
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQML-RSGTEPNEFTFATVX 202
+L+ A +VF M E+N+VSW ++I+A G +L LF +M+ +SG P++ TF +
Sbjct: 592 NLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEII 651
Query: 203 S 203
S
Sbjct: 652 S 652
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 331 bits (848), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 205/579 (35%), Positives = 312/579 (53%), Gaps = 47/579 (8%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKC---DSLRDARHVFDEMPERNVVSWTAMISA 169
G++VH +K S+++ +I +Y +C + +A VF+ + +N+V+W +MI+A
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR--------------QIHSLIIK 215
+ +A+ +F++M G + T + S L + Q+HSL +K
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVK 295
Query: 216 SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE----RDVVSCTAIISGYAQLGLDEE 271
S V ++L+ +Y++ + + ++ E RD+V+ II+ +A E
Sbjct: 296 SGLVTQTEVATALIKVYSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PER 352
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
A+ LF QLR E + ++ T++SVL A +GL + H +H V++ + VL NSLI
Sbjct: 353 AIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIH 412
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
Y+KCG+L R+FD M R V+SWN+ML Y HG+ +L +F M ++ PD
Sbjct: 413 AYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM----DINPDSA 468
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
T +A+LS CSH G + GL IF M K P+ HY CV+D+L RA R EA E IK
Sbjct: 469 TFIALLSACSHAGRVEEGLRIFRSMFE-KPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 452 KMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE-IETGNAGNYFFLSXDVR------ 504
+MP +P A +W +LLG+C H N +G +L E +E N+ +Y +S
Sbjct: 528 QMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFN 587
Query: 505 ----SLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEA 560
S+++M + V KEP S E+ +H F + R P +E VY ++K L KE
Sbjct: 588 EANLSIKEMETWR-VRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKEM 646
Query: 561 GYVPDL-SCVLHDVDEEQKEKILLGHSEKLALSFGLI----STPEGVP-IRVIKNLRICV 614
GYVP++ S DEEQ+E LL HSEKLAL+F ++ S+ GV I+++KN RIC+
Sbjct: 647 GYVPEMRSASQDIEDEEQEEDNLLHHSEKLALAFAVMEGRKSSDCGVNLIQIMKNTRICI 706
Query: 615 DCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
DCHNF K SK+ G+E+ +RD NRFH CSC DYW
Sbjct: 707 DCHNFMKLASKLLGKEILMRDSNRFHHFKDSSCSCNDYW 745
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 18/200 (9%)
Query: 290 TYASVLTALSGLASLDHGKQVHNHVLRSEV--PSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
YA++ A + +L G +H+H+L V+L N LI+MY+KCGN+ Y+R++FD
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 348 TMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH-GGLE 406
TM ER V+SW A++ GY + G +E LF+ M + P+ T+ +VL+ C + G +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSML--SHCFPNEFTLSSVLTSCRYEPGKQ 178
Query: 407 DRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGR---AGRVEEAFEFIKKMPFEPTAAIWG 463
GL + K+G+ V+ + GR EA+ + + F+ W
Sbjct: 179 VHGLAL-------KLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFK-NLVTWN 230
Query: 464 SLLGA--CSVHSNVDIGVFV 481
S++ A C IGVF+
Sbjct: 231 SMIAAFQCCNLGKKAIGVFM 250
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 93/214 (43%), Gaps = 16/214 (7%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++++L C R +HA +IK +L L LI Y KC SL VFD+M
Sbjct: 372 FSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMD 431
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG---------R 207
R+VVSW +M+ AYS G L +F +M P+ TF + S R
Sbjct: 432 SRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLR 488
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP-ERDVVSCTAIISGYAQL 266
S+ K + + ++DM ++ + EA + + +P + D V A++ +
Sbjct: 489 IFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKH 548
Query: 267 G---LDEEALDLFRQLRGEGMQSNYVTYASVLTA 297
G L + A D ++L +Y+ +++ A
Sbjct: 549 GNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNA 582
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 186/502 (37%), Positives = 287/502 (57%), Gaps = 21/502 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ A+L+ + + G+++H IK L V L L+ +Y+KC+SL +A +FD
Sbjct: 224 FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSG 283
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
+RN ++W+AM++ YSQ G + +A+ LF +M +G +P+E+T V + G+Q
Sbjct: 284 DRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQ 343
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+HS ++K ++ H++ ++L+DMYAK G + +AR F+CL ERDV T++ISGY Q
Sbjct: 344 LHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSD 403
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+EEAL L+R+++ G+ N T ASVL A S LA+L+ GKQVH H ++ V + ++
Sbjct: 404 NEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSA 463
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
L MYSKCG+L +F + V+SWNAM+ G +G+G E LELF M E ++P
Sbjct: 464 LSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEG-MEP 522
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D VT + ++S CSH G +RG +++M S +IG++PK +HY C+VDLL RAG+++EA E
Sbjct: 523 DDVTFVNIISACSHKGFVERGW-FYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKE 581
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS-------- 500
FI+ + +W LL AC H ++GV+ G +L+ + + + Y LS
Sbjct: 582 FIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGR 641
Query: 501 -XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
DV + M V KE G S IEL H F D HP EE V +S + E
Sbjct: 642 MRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIE 701
Query: 560 AGYVPDLSCVLHDVDEEQKEKI 581
G+V L V+EE+ ++
Sbjct: 702 EGFVTVLDSSF--VEEEEGTQL 721
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 204/374 (54%), Gaps = 19/374 (5%)
Query: 107 KRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAM 166
+R L G+ VH +I+T + L+ Y KC L A +F+ + ++VVSW ++
Sbjct: 27 QRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSL 86
Query: 167 ISAYSQRGYASQA---LNLFVQMLRSGTEPNEFTFATV--------XSMLGRQIHSLIIK 215
I+ YSQ G S + + LF +M PN +T A + S +GRQ H+L++K
Sbjct: 87 ITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVK 146
Query: 216 SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEAL-- 273
+ +YV +SL+ MY K G + + +F +PER+ + + ++SGYA G EEA+
Sbjct: 147 MSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKV 206
Query: 274 -DLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDM 332
+LF + + EG S+YV + +VL++L+ + G+Q+H +++ + +V L N+L+ M
Sbjct: 207 FNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTM 265
Query: 333 YSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVT 392
YSKC +L + ++FD+ +R ++W+AM+ GY ++GE E ++LF+ M +KP T
Sbjct: 266 YSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAG-IKPSEYT 324
Query: 393 MLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKK 452
++ VL+ CS + G + + K+G E +VD+ +AG + +A +
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLL--KLGFERHLFATTALVDMYAKAGCLADARKGFDC 382
Query: 453 MPFEPTAAIWGSLL 466
+ E A+W SL+
Sbjct: 383 LQ-ERDVALWTSLI 395
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 307 GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGK 366
G+ VH ++R+ + + N L++ Y+KCG L + IF+ + + V+SWN+++ GY +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 367 HG---EGREVLELFTLMREENEVKPDGVTMLAVL---SGCSHGGLEDRGLDIFYDMTS-G 419
+G V++LF MR + ++ P+ T+ + S + + + M+S G
Sbjct: 93 NGGISSSYTVMQLFREMRAQ-DILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFG 151
Query: 420 KIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGV 479
I V+ +V + +AG VE+ + MP E W +++ + V+ +
Sbjct: 152 DIYVDTS------LVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAI 204
Query: 480 FVGHRLL-EIETGNAGNYFF 498
V + L E E G+ +Y F
Sbjct: 205 KVFNLFLREKEEGSDSDYVF 224
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 174/443 (39%), Positives = 266/443 (60%), Gaps = 16/443 (3%)
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR----G 281
+S+++ YAK G I +AR +F+ +PER+V+S + +I+GY G +EALDLFR+++
Sbjct: 132 NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN 191
Query: 282 EG-MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLT 340
E ++ N T ++VL+A L +L+ GK VH ++ + V +VL +LIDMY+KCG+L
Sbjct: 192 EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLE 251
Query: 341 YSRRIFDTM-QERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG 399
++R+F+ + ++ V +++AM+ +G E +LF+ M + + P+ VT + +L
Sbjct: 252 RAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGA 311
Query: 400 CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTA 459
C H GL + G ++ M + G+ P +HYGC+VDL GR+G ++EA FI MP EP
Sbjct: 312 CVHRGLINEGKS-YFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDV 370
Query: 460 AIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMM 510
IWGSLL + ++ RL+E++ N+G Y LS +V+ +R M
Sbjct: 371 LIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEM 430
Query: 511 LKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVL 570
K + K PG S +E++ V+H F D S E +Y + E+ R +EAGYV D VL
Sbjct: 431 EVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVL 490
Query: 571 HDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGRE 630
D++E+ KE L HSEKLA++F L+ T G P+R+IKNLRIC DCH K ISK++ RE
Sbjct: 491 LDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSRE 550
Query: 631 VSLRDKNRFHQIVGGKCSCGDYW 653
+ +RD NRFH G CSC D+W
Sbjct: 551 IVVRDCNRFHHFRDGSCSCRDFW 573
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 140/299 (46%), Gaps = 48/299 (16%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRD------------------------- 147
GQR HA ++ F+RT L+ +Y+ C LR
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 148 ------ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQML-----RSGTEPNEF 196
AR +FDEMPERNV+SW+ +I+ Y G +AL+LF +M + PNEF
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 197 TFATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL 248
T +TV S GR +H+ I K + + + +G++L+DMYAK G + A+ +F L
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 249 -PERDVVSCTAIISGYAQLGLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDH 306
++DV + +A+I A GL +E LF ++ + + N VT+ +L A ++
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 307 GKQVHNHVLRS-EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM-QERTVMSWNAMLVG 363
GK ++ + + ++D+Y + G + + +M E V+ W ++L G
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM-P 156
+ +L+ C AL +G+ VHA++ K + L T LI +Y KC SL A+ VF+ +
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGS 262
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRS-GTEPNEFTFATVXSMLGRQIHSLII- 214
+++V +++AMI + G + LF +M S PN TF + LG +H +I
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGI---LGACVHRGLIN 319
Query: 215 --KSNYDAHV----------YVGSSLLDMYAKDGKIHEARGIFECLP-ERDVVSCTAIIS 261
KS + + + G ++D+Y + G I EA +P E DV+ +++S
Sbjct: 320 EGKSYFKMMIEEFGITPSIQHYG-CMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLS 378
Query: 262 GYAQLG 267
G LG
Sbjct: 379 GSRMLG 384
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 69/266 (25%)
Query: 273 LDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDM 332
+ ++ ++R + ++ T+ +L + L G++ H +L + ++ SL++M
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 333 YSKCGNLTY-------------------------------SRRIFDTMQERTVMSWNAML 361
YS CG+L +R++FD M ER V+SW+ ++
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 362 VGYGKHGEGREVLELFTLMR----EENEVKPDGVTMLAVLSGCSHGGLEDRG-------- 409
GY G+ +E L+LF M+ E V+P+ TM VLS C G ++G
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 410 -----LDI-----FYDMTS------------GKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
+DI DM + +G + + Y ++ L G +E F
Sbjct: 227 KYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF 286
Query: 448 EFIKKMP----FEPTAAIWGSLLGAC 469
+ +M P + + +LGAC
Sbjct: 287 QLFSEMTTSDNINPNSVTFVGILGAC 312
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 187/587 (31%), Positives = 315/587 (53%), Gaps = 20/587 (3%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRY-LPSVFLRTRLIVLYTKC 142
+M CG + L C + + G+ +H H +++R V + T ++ +Y+K
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 143 DSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQML-RSGTEPNEFTFATV 201
+ A +F+ M +RN+V+W MI Y++ G + A F +M ++G +P+ T +
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 202 XS----MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCT 257
+ GR IH ++ + H+ + ++L+DMY + G++ A IF+ + E++V+S
Sbjct: 341 LPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWN 400
Query: 258 AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
+II+ Y Q G + AL+LF++L + + T AS+L A + SL G+++H ++++S
Sbjct: 401 SIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKS 460
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF 377
S ++ NSL+ MY+ CG+L +R+ F+ + + V+SWN++++ Y HG GR + LF
Sbjct: 461 RYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
+ M + V P+ T ++L+ CS G+ D G + F M + G++P EHYGC++DL+
Sbjct: 521 SEMI-ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKR-EYGIDPGIEHYGCMLDLI 578
Query: 438 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYF 497
GR G A F+++MPF PTA IWGSLL A H ++ I F ++ ++E N G Y
Sbjct: 579 GRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYV 638
Query: 498 FL---------SXDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYI 548
L DV ++ +M K + + RS +E H F DRSH ++Y
Sbjct: 639 LLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIY- 697
Query: 549 KVKELSVRF--KEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRV 606
+V ++ R +E YV +S + + + + HS +LA FGLIST G + V
Sbjct: 698 EVLDVVSRMVGEEDIYVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTV 757
Query: 607 IKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
N RIC CH F + S++ RE+ + D FH G+CSCG+YW
Sbjct: 758 RNNTRICRKCHEFLEKASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 175/299 (58%), Gaps = 15/299 (5%)
Query: 109 ALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
+L EG+++HA +IK ++ V++ LI LY K DA VF+EMPER++VSW +MIS
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYD- 219
Y G +L LF +ML+ G +P+ F+ + +G++IH ++S +
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIET 264
Query: 220 AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
V V +S+LDMY+K G++ A IF + +R++V+ +I YA+ G +A F+++
Sbjct: 265 GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 280 RGE-GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
+ G+Q + +T ++L A +++ G+ +H + +R ++VL+ +LIDMY +CG
Sbjct: 325 SEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQ 380
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
L + IFD M E+ V+SWN+++ Y ++G+ LELF + + + V PD T+ ++L
Sbjct: 381 LKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV-PDSTTIASIL 438
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 185/345 (53%), Gaps = 16/345 (4%)
Query: 133 TRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE 192
TR + + + DA +FDEM + + W MI ++ G +A+ + +M+ +G +
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 193 PNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGI 244
+ FT+ V + G++IH+++IK + + VYV +SL+ +Y K G +A +
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 245 FECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASL 304
FE +PERD+VS ++ISGY LG +L LF+++ G + + + S L A S + S
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 305 DHGKQVHNHVLRSEVPS-YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVG 363
GK++H H +RS + + V++ S++DMYSK G ++Y+ RIF+ M +R +++WN M+
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 364 YGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGV 423
Y ++G + F M E+N ++PD +T + +L + LE R + + + + G
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAI--LEGRTIHGY----AMRRGF 361
Query: 424 EPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
P ++D+ G G+++ A +M E W S++ A
Sbjct: 362 LPHMVLETALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSIIAA 405
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/519 (37%), Positives = 286/519 (55%), Gaps = 43/519 (8%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+ + C + L EG +++ IK+ V + I +Y KC +L +A VFDEM
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM-------LGRQIH 210
R+ VSW A+I+A+ Q G + L LFV MLRS EP+EFTF ++ G +IH
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIH 505
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCT------------- 257
S I+KS ++ VG SL+DMY+K G I EA I +R VS T
Sbjct: 506 SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQ 565
Query: 258 -------AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQV 310
+IISGY E+A LF ++ G+ + TYA+VL + LAS GKQ+
Sbjct: 566 EMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQI 625
Query: 311 HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEG 370
H V++ E+ S V + ++L+DMYSKCG+L SR +F+ R ++WNAM+ GY HG+G
Sbjct: 626 HAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKG 685
Query: 371 REVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
E ++LF M EN +KP+ VT +++L C+H GL D+GL+ FY M G++P+ HY
Sbjct: 686 EEAIQLFERMILEN-IKPNHVTFISILRACAHMGLIDKGLEYFY-MMKRDYGLDPQLPHY 743
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH-SNVDIGVFVGHRLLEIE 489
+VD+LG++G+V+ A E I++MPFE IW +LLG C++H +NV++ LL ++
Sbjct: 744 SNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLD 803
Query: 490 TGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSH 540
++ Y LS V LR M + KEPG S +EL LH F D++H
Sbjct: 804 PQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAH 863
Query: 541 PRREEVYIKVKELSVRFKEAGYVPDLSCVLH-DVDEEQK 578
PR EE+Y +EL + + E D S V +V+EE +
Sbjct: 864 PRWEEIY---EELGLIYSEMKPFDDSSFVRGVEVEEEDQ 899
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 200/411 (48%), Gaps = 43/411 (10%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++ + EC + AL G++ HAHMI + + P+ F+ L+ +YT A VFD+MP
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 157 ERNVVSWTAMISAYS-------------------------------QRGYASQALNLFVQ 185
R+VVSW MI+ YS Q G + +++ +FV
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 186 MLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGK 237
M R G E + TFA + + LG QIH ++++ D V S+LLDMYAK +
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 238 IHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA 297
E+ +F+ +PE++ VS +AII+G Q L AL F++++ + YASVL +
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 298 LSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSW 357
+ L+ L G Q+H H L+S+ + +++ + +DMY+KC N+ ++ +FD + S+
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMT 417
NAM+ GY + G + L LF + + D +++ V C+ GL I+
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSG-LGFDEISLSGVFRACALVKGLSEGLQIYGLAI 409
Query: 418 SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
+ ++ + +D+ G+ + EAF +M A W +++ A
Sbjct: 410 KSSLSLDVCVAN--AAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAA 457
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/343 (28%), Positives = 177/343 (51%), Gaps = 14/343 (4%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G ++H +++ V + L+ +Y K ++ VF +PE+N VSW+A+I+ Q
Sbjct: 199 GMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQ 258
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYV 224
S AL F +M + ++ +A+V LG Q+H+ +KS++ A V
Sbjct: 259 NNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIV 318
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGM 284
++ LDMYAK + +A+ +F+ + S A+I+GY+Q +AL LF +L G+
Sbjct: 319 RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGL 378
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
+ ++ + V A + + L G Q++ ++S + V + N+ IDMY KC L + R
Sbjct: 379 GFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFR 438
Query: 345 IFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGG 404
+FD M+ R +SWNA++ + ++G+G E L LF M + ++PD T ++L C+ G
Sbjct: 439 VFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSML-RSRIEPDEFTFGSILKACTGGS 497
Query: 405 LEDRGLDIFYDMTSGKIGVEPKKEHYGC-VVDLLGRAGRVEEA 446
L G++I + + GC ++D+ + G +EEA
Sbjct: 498 L-GYGMEIHSSIVKSGMA---SNSSVGCSLIDMYSKCGMIEEA 536
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 137/312 (43%), Gaps = 55/312 (17%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +L+ C + + G+++HA +IK V++ + L+ +Y+KC L D+R +F++
Sbjct: 606 YATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL 665
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV------XSMLGRQIH 210
R+ V+W AMI Y+ G +A+ LF +M+ +PN TF ++ ++ + +
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 211 SL-IIKSNY--DAHVYVGSSLLDMYAKDGKIHEARGIFECLP-ERDVVSCTAIISGYAQL 266
++K +Y D + S+++D+ K GK+ A + +P E D V
Sbjct: 726 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDV------------ 773
Query: 267 GLDEEALDLFRQLRGE-GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
++R L G + N V A TA L LD + +Y +L
Sbjct: 774 --------IWRTLLGVCTIHRNNVEVAEEATA--ALLRLDP----------QDSSAYTLL 813
Query: 326 QNSLID--MYSKCGNLTYSRRIFDTMQERTVMSW-------NAMLVGYGKHGEGREVLEL 376
N D M+ K +L + R F +E SW + LVG H E+ E
Sbjct: 814 SNVYADAGMWEKVSDLRRNMRGFKLKKEPGC-SWVELKDELHVFLVGDKAHPRWEEIYEE 872
Query: 377 FTLMREENEVKP 388
L+ +E+KP
Sbjct: 873 LGLIY--SEMKP 882
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 167/482 (34%), Positives = 264/482 (54%), Gaps = 57/482 (11%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
L E ++ A + G+++HA +IKT + P + + +L++L+ KC L AR VFDE+P+ +
Sbjct: 41 LQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTL 100
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM-------------LGR 207
++ MIS Y + G + L L +M SG + + +T + V L R
Sbjct: 101 SAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCR 160
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
+H+ IIK + + + ++L+D Y K GK+ AR +FE + + +VV CT++ISGY G
Sbjct: 161 LVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQG 220
Query: 268 LDEEA--------------------------------LDLFRQLRGEGMQSNYVTYASVL 295
E+A +D++ ++ G N T+ASV+
Sbjct: 221 FVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVI 280
Query: 296 TALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM 355
A S L S + G+QVH +++S V +++ + +SL+DMY+KCG + +RR+FD MQE+ V
Sbjct: 281 GACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVF 340
Query: 356 SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
SW +M+ GYGK+G E LELFT M+ E ++P+ VT L LS CSH GL D+G +IF
Sbjct: 341 SWTSMIDGYGKNGNPEEALELFTRMK-EFRIEPNYVTFLGALSACSHSGLVDKGYEIFES 399
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNV 475
M ++PK EHY C+VDL+GRAG + +AFEF + MP P + IW +LL +C++H NV
Sbjct: 400 MQR-DYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNV 458
Query: 476 DIGVFVGHRLLEIETGN-AGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIE 525
++ L ++ G Y LS +V +R++M ++ + K GRS
Sbjct: 459 ELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 518
Query: 526 LD 527
D
Sbjct: 519 ED 520
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 83 LQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKC 142
+ M G + +++ C + GQ+VHA ++K+ + + + L+ +Y KC
Sbjct: 262 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKC 321
Query: 143 DSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX 202
+ DAR VFD+M E+NV SWT+MI Y + G +AL LF +M EPN TF
Sbjct: 322 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGAL 381
Query: 203 SMLGRQIHSLIIKSNYDAHVYVG------------SSLLDMYAKDGKIHEARGIFECLPE 250
S HS ++ Y+ + + ++D+ + G +++A +PE
Sbjct: 382 SACS---HSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPE 438
Query: 251 R 251
R
Sbjct: 439 R 439
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 156/436 (35%), Positives = 253/436 (58%), Gaps = 15/436 (3%)
Query: 228 LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQ-LRGEGMQS 286
+++ K G+ A+ + +++V++ +I GY + EEAL + L ++
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 287 NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
N ++AS L A + L L H K VH+ ++ S + +L ++L+D+Y+KCG++ SR +F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 347 DTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLE 406
+++ V WNAM+ G+ HG E + +F+ M E+ V PD +T L +L+ CSH GL
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEH-VSPDSITFLGLLTTCSHCGLL 282
Query: 407 DRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
+ G + ++ + S + ++PK EHYG +VDLLGRAGRV+EA+E I+ MP EP IW SLL
Sbjct: 283 EEGKE-YFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 467 GACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMK 517
+ + N ++G + + +G+Y LS + +R++M K+ + K
Sbjct: 342 SSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 518 EPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQ 577
G+S +E ++H F A D SH + +Y ++ L + K G+V D VL DV EE+
Sbjct: 399 AKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEE 458
Query: 578 KEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKN 637
KE+ L HSEKLAL++ ++ + G IR+ KN+R+C DCHN+ K +SK+ R + +RD+
Sbjct: 459 KEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRI 518
Query: 638 RFHQIVGGKCSCGDYW 653
RFH+ G CSC DYW
Sbjct: 519 RFHRFEDGLCSCRDYW 534
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 114/225 (50%), Gaps = 11/225 (4%)
Query: 148 ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLR-SGTEPNEFTFATVXSMLG 206
A+ V ++NV++W MI Y + +AL ML + +PN+F+FA+ +
Sbjct: 117 AKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACA 176
Query: 207 R--------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTA 258
R +HSL+I S + + + S+L+D+YAK G I +R +F + DV A
Sbjct: 177 RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNA 236
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS- 317
+I+G+A GL EA+ +F ++ E + + +T+ +LT S L+ GK+ + R
Sbjct: 237 MITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRF 296
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWNAML 361
+ + +++D+ + G + + + ++M E V+ W ++L
Sbjct: 297 SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ + L C L + VH+ MI + + L + L+ +Y KC + +R VF +
Sbjct: 168 FASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVK 227
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
+V W AMI+ ++ G A++A+ +F +M P+ TF + + G++
Sbjct: 228 RNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE 287
Query: 209 IHSLIIKS-NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP-ERDVVSCTAIIS 261
L+ + + + +++D+ + G++ EA + E +P E DVV +++S
Sbjct: 288 YFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 179/547 (32%), Positives = 292/547 (53%), Gaps = 31/547 (5%)
Query: 133 TRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE 192
T +I Y + A +F + E+N +++ A+++ + + G+ +AL LF ML+ G E
Sbjct: 355 TEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVE 414
Query: 193 PNEFTFATVXSMLG--------RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGI 244
+F+ + G QIH IK + + ++LLDM + ++ +A +
Sbjct: 415 LTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEM 474
Query: 245 FECLPER--DVVSCTAIISGYAQLGLDEEALDLF-RQLRGEGMQSNYVTYASVLTALSGL 301
F+ P + T+II GYA+ GL ++A+ LF R L + + + V+ +L L
Sbjct: 475 FDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTL 534
Query: 302 ASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAML 361
+ G Q+H + L++ S + L NSLI MY+KC + + +IF+TM+E V+SWN+++
Sbjct: 535 GFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLI 594
Query: 362 VGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGL----DIFYDMT 417
Y G E L L++ M E+ E+KPD +T+ V+S + E L D+F M
Sbjct: 595 SCYILQRNGDEALALWSRMNEK-EIKPDIITLTLVISAFRYT--ESNKLSSCRDLFLSMK 651
Query: 418 SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDI 477
+ +EP EHY V +LG G +EEA + I MP +P ++ +LL +C +HSN +
Sbjct: 652 T-IYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSV 710
Query: 478 GVFVGHRLLEIETGNAGNYFFLSXDVRS----------LRDMMLKKAVMKEPGRSRIELD 527
V +L + Y L ++ S +R+ M ++ K P +S I +
Sbjct: 711 AKRVAKLILSTKPETPSEYI-LKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHE 769
Query: 528 QVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSE 587
+H+FHA D SHP+ +++Y ++ L + + GY P+ VL +VDE K+ L HS
Sbjct: 770 NKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSA 829
Query: 588 KLALSFGLIST-PEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGK 646
KLA+++G++S+ G P+RV+KN+ +C DCH F KYIS + RE+ LRD + FH V GK
Sbjct: 830 KLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGK 889
Query: 647 CSCGDYW 653
CSC D W
Sbjct: 890 CSCRDLW 896
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 183/390 (46%), Gaps = 23/390 (5%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
G+ LL + + VHA +K R L LI Y K R+A VF +
Sbjct: 82 GFFYLLRLSAQYHDVEVTKAVHASFLKLRE-EKTRLGNALISTYLKLGFPREAILVFVSL 140
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXSM--------LG 206
VVS+TA+IS +S+ +AL +F +M ++G +PNE+TF + + LG
Sbjct: 141 SSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDG--KIHEARGIFECLPERDVVSCTAIISGYA 264
QIH LI+KS + V+V +SL+ +Y KD + +F+ +P+RDV S ++S
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV 260
Query: 265 QLGLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
+ G +A DLF ++ R EG + T +++L++ + + L G+++H +R + +
Sbjct: 261 KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQEL 320
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+ N+LI YSK ++ +++ M + +++ M+ Y G +E+F + E+
Sbjct: 321 SVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEK 380
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR- 442
N +T A+++G G + L +F DM + GVE VD G
Sbjct: 381 NT-----ITYNALMAGFCRNGHGLKALKLFTDML--QRGVELTDFSLTSAVDACGLVSEK 433
Query: 443 --VEEAFEFIKKMPFEPTAAIWGSLLGACS 470
E+ F K I +LL C+
Sbjct: 434 KVSEQIHGFCIKFGTAFNPCIQTALLDMCT 463
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 105/199 (52%), Gaps = 15/199 (7%)
Query: 113 GQRVHAHMIK--TRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER--NVVSWTAMIS 168
+++H IK T + P + +T L+ + T+C+ + DA +FD+ P + + T++I
Sbjct: 436 SEQIHGFCIKFGTAFNPCI--QTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIG 493
Query: 169 AYSQRGYASQALNLFVQML-RSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYD 219
Y++ G +A++LF + L +E + + ++ +G QIH +K+ Y
Sbjct: 494 GYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYF 553
Query: 220 AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
+ + +G+SL+ MYAK +A IF + E DV+S ++IS Y +EAL L+ ++
Sbjct: 554 SDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRM 613
Query: 280 RGEGMQSNYVTYASVLTAL 298
+ ++ + +T V++A
Sbjct: 614 NEKEIKPDIITLTLVISAF 632
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 134/349 (38%), Gaps = 76/349 (21%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G ++H + +K Y + L LI +Y KC DA +F+ M E +V+SW ++IS Y
Sbjct: 540 GYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYIL 599
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMY 232
+ +AL L+ +M +P+ T V S Y
Sbjct: 600 QRNGDEALALWSRMNEKEIKPDIITLTLVISAF-------------------------RY 634
Query: 233 AKDGKIHEARGIFECLP-----ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSN 287
+ K+ R +F + E TA + GL EEA D + +Q
Sbjct: 635 TESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSM---PVQPE 691
Query: 288 YVTYASVLTALSGLASLDHGKQVHNHVL--RSEVPSYVVLQNSLIDMYSKCGNLTYSRRI 345
++L + ++ K+V +L + E PS +L++ ++YS G S I
Sbjct: 692 VSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKS---NIYSASGFWHRSEMI 748
Query: 346 FDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
+ M+ER GY KH ++ EN++ SH
Sbjct: 749 REEMRER----------GYRKHPAKSWII-------HENKIHSFHA------RDTSHPQE 785
Query: 406 ED--RGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKK 452
+D RGL+I M K+G EP E+ ++E EF+KK
Sbjct: 786 KDIYRGLEILI-MECLKVGYEPNTEYV------------LQEVDEFMKK 821
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/569 (31%), Positives = 293/569 (51%), Gaps = 49/569 (8%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
++ C + + +G VH+ +K ++ V + L+ +Y+KC L DAR VFD + ++V
Sbjct: 359 VSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDV 418
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDA 220
+W +MI+ Y Q GY +A LF +M + PN T+ T+ S IK+ +
Sbjct: 419 YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGY--------IKNGDEG 470
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
L KDGK+ +R+ + II+GY Q G +EAL+LFR+++
Sbjct: 471 EAM---DLFQRMEKDGKV-----------QRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 281 GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLT 340
N VT S+L A + L +++H VLR + + ++N+L D Y+K G++
Sbjct: 517 FSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE 576
Query: 341 YSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
YSR IF M+ + +++WN+++ GY HG L LF M+ + + P+ T+ +++
Sbjct: 577 YSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQG-ITPNRGTLSSIILAH 635
Query: 401 SHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAA 460
G D G +FY + + + P EH +V L GRA R+EEA +FI++M +
Sbjct: 636 GLMGNVDEGKKVFYSI-ANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP 694
Query: 461 IWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGN-------YFFLSXDVRSL------R 507
IW S L C +H ++D+ + L +E N Y + RSL R
Sbjct: 695 IWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRR 754
Query: 508 DMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELS-VRFKEAGYVPDL 566
D +LKK + G+S IE+ ++HTF D+S + +Y V+++S + + Y +L
Sbjct: 755 DNLLKKPL----GQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGEL 810
Query: 567 SCVLHDVDEEQKEKILLGHSEKLALSFGLIST--PEGVPIRVIKNLRICVDCHNFAKYIS 624
++EE +E+ HSEK A++FGLIS+ IR++KNLR+C DCH+ AKY+S
Sbjct: 811 W-----IEEEGREETCGIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVS 865
Query: 625 KIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
K YG ++ L D H G CSC DYW
Sbjct: 866 KRYGCDILLEDTRCLHHFKNGDCSCKDYW 894
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/382 (28%), Positives = 191/382 (50%), Gaps = 38/382 (9%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +L C + + G+ +H+ +IK + + ++ +Y KC L A F M
Sbjct: 184 FPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR 243
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKS 216
ER+V++W +++ AY Q G +A+ L +M + G P T+
Sbjct: 244 ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW------------------ 285
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE----RDVVSCTAIISGYAQLGLDEEA 272
++ +G Y + GK A + + + DV + TA+ISG G+ +A
Sbjct: 286 ----NILIGG-----YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 273 LDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDM 332
LD+FR++ G+ N VT S ++A S L ++ G +VH+ ++ V++ NSL+DM
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 333 YSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVT 392
YSKCG L +R++FD+++ + V +WN+M+ GY + G + ELFT M++ N ++P+ +T
Sbjct: 397 YSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDAN-LRPNIIT 455
Query: 393 MLAVLSGCSHGGLEDRGLDIFYDM-TSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
++SG G E +D+F M GK V+ + ++ + G+ +EA E +
Sbjct: 456 WNTMISGYIKNGDEGEAMDLFQRMEKDGK--VQRNTATWNLIIAGYIQNGKKDEALELFR 513
Query: 452 KMPFE---PTAAIWGSLLGACS 470
KM F P + SLL AC+
Sbjct: 514 KMQFSRFMPNSVTILSLLPACA 535
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 53/394 (13%)
Query: 89 GHDMKFKGYNALLNECVSKRALREGQRVHAHM-IKTRYLPSVFLRTRLIVLYTKCDSLRD 147
G +K Y LL C+ ++ G+ +HA + T P VF+ T+L+ +Y KC + D
Sbjct: 76 GSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTE--PDVFVETKLLSMYAKCGCIAD 133
Query: 148 ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS---- 203
AR VFD M ERN+ +W+AMI AYS+ + LF M++ G P++F F +
Sbjct: 134 ARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCAN 193
Query: 204 ----MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI 259
G+ IHS++IK + + V +S+L +YAK G++ A F + ERDV++ ++
Sbjct: 194 CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSV 253
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
+ Y Q G EEA++L +++ EG+ VT+ ++ + L D
Sbjct: 254 LLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCD-------------- 299
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTL 379
+ +D+ K + +F +W AM+ G +G + L++F
Sbjct: 300 --------AAMDLMQKMETFGITADVF---------TWTAMISGLIHNGMRYQALDMFRK 342
Query: 380 MREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGR 439
M V P+ VT+++ +S CS + ++G ++ + K+G +VD+ +
Sbjct: 343 MFLAG-VVPNAVTIMSAVSACSCLKVINQGSEVH--SIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 440 AGRVEEA---FEFIKKMPFEPTAAIWGSLL-GAC 469
G++E+A F+ +K W S++ G C
Sbjct: 400 CGKLEDARKVFDSVKN----KDVYTWNSMITGYC 429
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 137/263 (52%), Gaps = 6/263 (2%)
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQ 278
+ V+V + LL MYAK G I +AR +F+ + ER++ + +A+I Y++ E LFR
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
+ +G+ + + +L + ++ GK +H+ V++ + S + + NS++ +Y+KCG
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLS 398
L ++ + F M+ER V++WN++L+ Y ++G+ E +EL M +E + P VT ++
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG-ISPGLVTWNILIG 290
Query: 399 GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE-- 456
G + G D +D+ M + G+ + ++ L G +A + +KM
Sbjct: 291 GYNQLGKCDAAMDLMQKMET--FGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGV 348
Query: 457 -PTAAIWGSLLGACSVHSNVDIG 478
P A S + ACS ++ G
Sbjct: 349 VPNAVTIMSAVSACSCLKVINQG 371
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 277/504 (54%), Gaps = 24/504 (4%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M LCG + L C L +G++VH +K + + LI +Y+KC
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
++DAR VF +PE +VVS A+I+ YSQ +A+ LF +ML G P+E TFAT+
Sbjct: 579 IIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 204 --------MLGRQIHSLIIKSNYDAH-VYVGSSLLDMYAKDGKIHEARGIF-ECLPERDV 253
LG Q H I K + + Y+G SLL MY + EA +F E + +
Sbjct: 638 ACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSI 697
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
V T ++SG++Q G EEAL ++++R +G+ + T+ +VL S L+SL G+ +H+
Sbjct: 698 VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSL 757
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT-VMSWNAMLVGYGKHGEGRE 372
+ + N+LIDMY+KCG++ S ++FD M+ R+ V+SWN+++ GY K+G +
Sbjct: 758 IFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAED 817
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
L++F MR+ + + PD +T L VL+ CSH G G IF +M G+ G+E + +H C
Sbjct: 818 ALKIFDSMRQ-SHIMPDEITFLGVLTACSHAGKVSDGRKIF-EMMIGQYGIEARVDHVAC 875
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
+VDLLGR G ++EA +FI+ +P A +W SLLGAC +H + G +L+E+E N
Sbjct: 876 MVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQN 935
Query: 493 AGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRR 543
+ Y LS +LR +M + V K PG S I+++Q H F A D+SH
Sbjct: 936 SSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEI 995
Query: 544 EEVYIKVKELSVRFKEAGYV-PDL 566
++ + +++L K+ V PD+
Sbjct: 996 GKIEMFLEDLYDLMKDDAVVNPDI 1019
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 174/328 (53%), Gaps = 19/328 (5%)
Query: 91 DMKFKGYN-------ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
DMK GYN +LL+ C + L G + H+ +IK + ++F+ L+ +Y KC
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCG 477
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
+L DAR +F+ M +R+ V+W +I +Y Q S+A +LF +M G + A+
Sbjct: 478 ALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLK 537
Query: 204 ML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS 255
G+Q+H L +K D ++ GSSL+DMY+K G I +AR +F LPE VVS
Sbjct: 538 ACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVS 597
Query: 256 CTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
A+I+GY+Q L EEA+ LF+++ G+ + +T+A+++ A SL G Q H +
Sbjct: 598 MNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQIT 656
Query: 316 RSEVPSY-VVLQNSLIDMYSKCGNLTYSRRIFDTMQE-RTVMSWNAMLVGYGKHGEGREV 373
+ S L SL+ MY +T + +F + ++++ W M+ G+ ++G E
Sbjct: 657 KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEA 716
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCS 401
L+ + MR + V PD T + VL CS
Sbjct: 717 LKFYKEMRHDG-VLPDQATFVTVLRVCS 743
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 185/373 (49%), Gaps = 33/373 (8%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++ +L+ C + + G+++H MIK + + L+ +Y KCD + DAR VF+ +
Sbjct: 163 FSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIV 222
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKS 216
+ N V WT + S Y + G +A+ +F +M G P+ F TV
Sbjct: 223 DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTV--------------- 267
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
++ Y + GK+ +AR +F + DVV+ +ISG+ + G + A++ F
Sbjct: 268 ------------INTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYF 315
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKC 336
+R ++S T SVL+A+ +A+LD G VH ++ + S + + +SL+ MYSKC
Sbjct: 316 FNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKC 375
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
+ + ++F+ ++E+ + WNAM+ GY +GE +V+ELF M+ D T ++
Sbjct: 376 EKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSG-YNIDDFTFTSL 434
Query: 397 LSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG-CVVDLLGRAGRVEEAFEFIKKMPF 455
LS C+ + G + K+ K G +VD+ + G +E+A + ++M
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLA---KNLFVGNALVDMYAKCGALEDARQIFERMC- 490
Query: 456 EPTAAIWGSLLGA 468
+ W +++G+
Sbjct: 491 DRDNVTWNTIIGS 503
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 169/328 (51%), Gaps = 11/328 (3%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPN 194
+I Y + L+DAR +F EM +VV+W MIS + +RG + A+ F M +S +
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 195 EFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE 246
T +V S LG +H+ IK +++YVGSSL+ MY+K K+ A +FE
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 247 CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH 306
L E++ V A+I GYA G + ++LF ++ G + T+ S+L+ + L+
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 307 GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGK 366
G Q H+ +++ ++ + + N+L+DMY+KCG L +R+IF+ M +R ++WN ++ Y +
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 367 HGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPK 426
E +LF M V DG + + L C+H +G + S K G++
Sbjct: 507 DENESEAFDLFKRMNLCGIV-SDGACLASTLKACTHVHGLYQGKQVH--CLSVKCGLDRD 563
Query: 427 KEHYGCVVDLLGRAGRVEEAFEFIKKMP 454
++D+ + G +++A + +P
Sbjct: 564 LHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 170/366 (46%), Gaps = 48/366 (13%)
Query: 109 ALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
ALR G+ VH+ + L ++ LY KC + A FD + E++V +W +M+S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLS 133
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDA 220
YS G + L FV + + PN+FTF+ V S GRQIH +IK +
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
+ Y G +L+DMYAK +I +AR +FE + + + V T + SGY + GL EEA+ +F ++R
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 281 GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLT 340
EG + +++ + +V I+ Y + G L
Sbjct: 254 DEGHRPDHLAFVTV-----------------------------------INTYIRLGKLK 278
Query: 341 YSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
+R +F M V++WN M+ G+GK G +E F MR ++ VK T+ +VLS
Sbjct: 279 DARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR-KSSVKSTRSTLGSVLSAI 337
Query: 401 SHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAA 460
D GL + + K+G+ +V + + ++E A + + + E
Sbjct: 338 GIVANLDLGLVVHAEAI--KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDV 394
Query: 461 IWGSLL 466
W +++
Sbjct: 395 FWNAMI 400
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 211/459 (45%), Gaps = 67/459 (14%)
Query: 113 GQRVHAHMIKTRYLPS-VFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYS 171
G+R++ H+ LPS + RL+ + L +R VFDEMP+R ++
Sbjct: 30 GRRIYGHV-----LPSHDQIHQRLLEICLGQCKLFKSRKVFDEMPQRLALA--------- 75
Query: 172 QRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDM 231
LR +G+ +HS + D+ +G++++D+
Sbjct: 76 ---------------LR----------------IGKAVHSKSLILGIDSEGRLGNAIVDL 104
Query: 232 YAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTY 291
YAK ++ A F+ L E+DV + +++S Y+ +G + L F L + N T+
Sbjct: 105 YAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTF 163
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE 351
+ VL+ + +++ G+Q+H +++ + +L+DMY+KC ++ +RR+F+ + +
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD 223
Query: 352 RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG-CSHGGLEDRGL 410
+ W + GY K G E + +F MR+E +PD + + V++ G L+D L
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGH-RPDHLAFVTVINTYIRLGKLKDARL 282
Query: 411 DIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF---IKKMPFEPTAAIWGSLLG 467
+F +M+S P + ++ G+ G A E+ ++K + T + GS+L
Sbjct: 283 -LFGEMSS------PDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 468 ACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDVRSLRDMMLKKAVMKEPGRSRIELD 527
A + +N+D+G+ V I+ G A N + S SL M K M+ + L+
Sbjct: 336 AIGIVANLDLGLVVHAE--AIKLGLASNIYVGS----SLVSMYSKCEKMEAAAKVFEALE 389
Query: 528 QVLHTF-HASDRSHPRREEVYIKVKELSVRFKEAGYVPD 565
+ F +A R + E + KV EL + K +GY D
Sbjct: 390 EKNDVFWNAMIRGYAHNGESH-KVMELFMDMKSSGYNID 427
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/515 (31%), Positives = 284/515 (55%), Gaps = 50/515 (9%)
Query: 109 ALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
AL G+++H H++K +++++ L+ +Y+ C + AR VFD + +V SW MIS
Sbjct: 150 ALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMIS 209
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDA 220
Y++ +++ L V+M R+ P T V S L +++H + + +
Sbjct: 210 GYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEP 269
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG--------LDE-- 270
+ + ++L++ YA G++ A IF + RDV+S T+I+ GY + G D+
Sbjct: 270 SLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMP 329
Query: 271 ---------------------EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQ 309
E+L++FR+++ GM + T SVLTA + L SL+ G+
Sbjct: 330 VRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEW 389
Query: 310 VHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE 369
+ ++ ++++ + VV+ N+LIDMY KCG ++++F M +R +W AM+VG +G+
Sbjct: 390 IKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQ 449
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEH 429
G+E +++F M++ + ++PD +T L VLS C+H G+ D+ F M S +EP H
Sbjct: 450 GQEAIKVFFQMQDMS-IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDH-RIEPSLVH 507
Query: 430 YGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIE 489
YGC+VD+LGRAG V+EA+E ++KMP P + +WG+LLGA +H++ + ++LE+E
Sbjct: 508 YGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELE 567
Query: 490 TGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSH 540
N Y L D+R +R ++ A+ K PG S IE++ H F A D+SH
Sbjct: 568 PDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSH 627
Query: 541 PRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDE 575
+ EE+Y+K++EL+ A Y+PD S +L + +
Sbjct: 628 LQSEEIYMKLEELAQESTFAAYLPDTSELLFEAGD 662
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 167/338 (49%), Gaps = 48/338 (14%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRD----ARHVFDEMPERNVVSWTAMISA 169
+++H+ I P+ + +L V + C L A +F ++PE +VV W MI
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFW--CSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKG 108
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---------GRQIHSLIIKSNYDA 220
+S+ + + L++ ML+ G P+ TF + + L G+++H ++K +
Sbjct: 109 WSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGS 168
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
++YV ++L+ MY+ G + ARG+F+ + DV S +ISGY ++ EE+++L ++
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 281 GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLT 340
+ VT VL+A S + D K+VH +V + + L+N+L++ Y+ CG +
Sbjct: 229 RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMD 288
Query: 341 YSRRIFDTMQERTVMSWNAMLVGYGKHGEGR----------------------------- 371
+ RIF +M+ R V+SW +++ GY + G +
Sbjct: 289 IAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGC 348
Query: 372 --EVLELFTLMREENEVKPDGVTMLAVLSGCSH-GGLE 406
E LE+F M+ + PD TM++VL+ C+H G LE
Sbjct: 349 FNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLE 385
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 94/227 (41%), Gaps = 11/227 (4%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L C +L G+ + ++ K + V + LI +Y KC A+ VF +M +R
Sbjct: 373 SVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQR 432
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR-----QIHSLI 213
+ +WTAM+ + G +A+ +F QM +P++ T+ V S Q
Sbjct: 433 DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFF 492
Query: 214 IKSNYD-----AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
K D + V+ G ++DM + G + EA I +P + G ++L
Sbjct: 493 AKMRSDHRIEPSLVHYG-CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHN 551
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
DE +L + E N YA + +G ++V ++
Sbjct: 552 DEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIV 598
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 294 bits (752), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 164/481 (34%), Positives = 276/481 (57%), Gaps = 23/481 (4%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+++L C S AL G +VHA+ IK ++ LI +Y KCD L DAR VFD
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 158 RNVVSWTAMISAYSQRGYA---SQALNLFVQMLRSGTEPNEFTF-------ATVXSM-LG 206
+VV + AMI YS+ G +ALN+F M P+ TF A++ S+ L
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
+QIH L+ K + ++ GS+L+D+Y+ + ++R +F+ + +D+V ++ +GY Q
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
+EEAL+LF +L+ + + T+A+++TA LAS+ G++ H +L+ + +
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
N+L+DMY+KCG+ + + FD+ R V+ WN+++ Y HGEG++ L++ M E +
Sbjct: 594 NALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEG-I 652
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
+P+ +T + VLS CSH GL + GL F M + G+EP+ EHY C+V LLGRAGR+ +A
Sbjct: 653 EPNYITFVGVLSACSHAGLVEDGLKQFELML--RFGIEPETEHYVCMVSLLGRAGRLNKA 710
Query: 447 FEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS------ 500
E I+KMP +P A +W SLL C+ NV++ + + ++G++ LS
Sbjct: 711 RELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK 770
Query: 501 ---XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRF 557
+ + +R+ M + V+KEPGRS I +++ +H F + D+SH + ++Y + +L V+
Sbjct: 771 GMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Query: 558 K 558
+
Sbjct: 831 R 831
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 105/297 (35%), Positives = 170/297 (57%), Gaps = 12/297 (4%)
Query: 116 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGY 175
VH +I +L LI LY++ + AR VF++MPERN+VSW+ M+SA + G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 176 ASQALNLFVQMLRSGTE-PNEFTFATV----XSMLGR------QIHSLIIKSNYDAHVYV 224
++L +F++ R+ + PNE+ ++ + GR Q+ S ++KS +D VYV
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGM 284
G+ L+D Y KDG I AR +F+ LPE+ V+ T +ISG ++G +L LF QL + +
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
+ ++VL+A S L L+ GKQ+H H+LR + L N LID Y KCG + + +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 345 IFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+F+ M + ++SW +L GY ++ +E +ELFT M + +KPD ++L+ C+
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG-LKPDMYACSSILTSCA 361
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 198/390 (50%), Gaps = 23/390 (5%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+ +L+ C L G+++HAH+++ L LI Y KC + A +F+ MP
Sbjct: 253 STVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPN 312
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQI 209
+N++SWT ++S Y Q +A+ LF M + G +P+ + +++ + G Q+
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H+ IK+N YV +SL+DMYAK + +AR +F+ DVV A+I GY++LG
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 270 ---EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
EAL++FR +R ++ + +T+ S+L A + L SL KQ+H + + + +
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAG 492
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
++LID+YS C L SR +FD M+ + ++ WN+M GY + E E L LF ++ E
Sbjct: 493 SALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE- 551
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
+PD T +++ G L L + K G+E ++D+ + G E+A
Sbjct: 552 RPDEFTFANMVTAA--GNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDA 609
Query: 447 FEFIKKMPFEPTAA----IWGSLLGACSVH 472
+ F+ A+ W S++ + + H
Sbjct: 610 HK-----AFDSAASRDVVCWNSVISSYANH 634
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 167/293 (56%), Gaps = 10/293 (3%)
Query: 115 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRG 174
++ + ++K+ + V++ T LI Y K ++ AR VFD +PE++ V+WT MIS + G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 175 YASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGS 226
+ +L LF Q++ P+ + +TV S G+QIH+ I++ + + +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 227 SLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS 286
L+D Y K G++ A +F +P ++++S T ++SGY Q L +EA++LF + G++
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 287 NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
+ +S+LT+ + L +L G QVH + +++ + + + NSLIDMY+KC LT +R++F
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 347 DTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE--NEVKPDGVTMLAVL 397
D V+ +NAM+ GY + G E+ E + R+ ++P +T +++L
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLL 461
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 5/168 (2%)
Query: 304 LDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVG 363
L + VH ++ + L N LI++YS+ G + Y+R++F+ M ER ++SW+ M+
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 364 YGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGV 423
HG E L +F + P+ + + + CS GL+ RG + + + S +
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGRWMVFQLQSFLVKS 177
Query: 424 EPKKEHY--GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 469
++ Y ++D + G ++ A +P E + W +++ C
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 265/482 (54%), Gaps = 25/482 (5%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
L++ C R G+ VH +I+ + + L L+ Y K + ++A ++F + E+
Sbjct: 168 TLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEK 227
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-----------GR 207
+V+SW+ +I+ Y Q G A++AL +F M+ GTEPN ATV +L GR
Sbjct: 228 DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPN---VATVLCVLQACAAAHDLEQGR 284
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
+ H L I+ + V V ++L+DMY K EA +F +P +DVVS A+ISG+ G
Sbjct: 285 KTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Query: 268 LDEEALDLFR-QLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
+ +++ F L + + + VL + S L L+ K H++V++ S +
Sbjct: 345 MAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIG 404
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
SL+++YS+CG+L + ++F+ + + + W +++ GYG HG+G + LE F M + +EV
Sbjct: 405 ASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV 464
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
KP+ VT L++LS CSH GL GL IF M + + P EHY +VDLLGR G ++ A
Sbjct: 465 KPNEVTFLSILSACSHAGLIHEGLRIFKLMVN-DYRLAPNLEHYAVLVDLLGRVGDLDTA 523
Query: 447 FEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX----- 501
E K+MPF PT I G+LLGAC +H N ++ V +L E+E+ +AG Y +S
Sbjct: 524 IEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVK 583
Query: 502 ----DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRF 557
+V LR+ + ++ + K S IE+ + +H F A D HP +E VY +KEL +
Sbjct: 584 GEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPVYGLLKELDLHM 643
Query: 558 KE 559
KE
Sbjct: 644 KE 645
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 193/382 (50%), Gaps = 13/382 (3%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPS-VFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
L C R + G+ +H + K L S +++ + LI +Y KC + +A +FDE+ + +
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQM-LRSGTEPNEFTFATVXSM--------LGRQIH 210
+V+W++M+S + + G QA+ F +M + S P+ T T+ S LGR +H
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
+I+ + + + +SLL+ YAK EA +F+ + E+DV+S + +I+ Y Q G
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
EAL +F + +G + N T VL A + L+ G++ H +R + + V + +L+
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
DMY KC + + +F + + V+SW A++ G+ +G +E F++M EN +PD
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
+ M+ VL CS G ++ F+ K G + +V+L R G + A +
Sbjct: 367 ILMVKVLGSCSELGFLEQA-KCFHSYVI-KYGFDSNPFIGASLVELYSRCGSLGNASKVF 424
Query: 451 KKMPFEPTAAIWGSLLGACSVH 472
+ + T +W SL+ +H
Sbjct: 425 NGIALKDT-VVWTSLITGYGIH 445
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 175/342 (51%), Gaps = 14/342 (4%)
Query: 141 KCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFAT 200
K S DAR +F EM +R++ W ++ + S+ + L F M R +P+ FT
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 201 VXSM--------LGRQIHSLIIKS-NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
G IH + K + +YVGSSL+ MY K G++ EA +F+ L +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQV 310
D+V+ ++++SG+ + G +A++ FR++ + + VT ++++A + L++ G+ V
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 311 HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEG 370
H V+R + + L NSL++ Y+K + +F + E+ V+SW+ ++ Y ++G
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 371 REVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
E L +F M ++ +P+ T+L VL C+ ++G +++ K G+E + +
Sbjct: 246 AEALLVFNDMMDDG-TEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRK-GLETEVKVS 302
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+VD+ + EEA+ ++P + + W +L+ +++
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSRIPRKDVVS-WVALISGFTLN 343
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 165/492 (33%), Positives = 276/492 (56%), Gaps = 52/492 (10%)
Query: 116 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGY 175
+HA +I+T + F+ LI + + DS+ A VF + NV +TAMI + G
Sbjct: 48 IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGR 107
Query: 176 ASQALNLFVQMLRSGTEPNEFTFATVXSM----LGRQIHSLIIKSNYDAHVYVGSSLLDM 231
++ ++L+ +M+ + P+ + +V + R+IH+ ++K + + VG ++++
Sbjct: 108 SADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEI 167
Query: 232 YAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF--------------- 276
Y K G++ A+ +F+ +P+RD V+ T +I+ Y++ G +EAL+LF
Sbjct: 168 YGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMI 227
Query: 277 ----------------RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV--LRSE 318
R+++ E + +N T VL+A S L +L+ G+ VH+ V R E
Sbjct: 228 DGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRME 287
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT 378
+ ++V N+LI+MYS+CG++ +RR+F M+++ V+S+N M+ G HG E + F
Sbjct: 288 LSNFV--GNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFR 345
Query: 379 LMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLG 438
M +P+ VT++A+L+ CSHGGL D GL++F M VEP+ EHYGC+VDLLG
Sbjct: 346 DMVNRG-FRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR-VFNVEPQIEHYGCIVDLLG 403
Query: 439 RAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFF 498
R GR+EEA+ FI+ +P EP + G+LL AC +H N+++G + RL E E ++G Y
Sbjct: 404 RVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVL 463
Query: 499 LS---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIK 549
LS + +R+ M + KEPG S IE+D +H F D +HP +E +Y +
Sbjct: 464 LSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQR 523
Query: 550 VKELS--VRFKE 559
++EL+ +RFKE
Sbjct: 524 LQELNRILRFKE 535
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 122/258 (47%), Gaps = 32/258 (12%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L+ C AL G+ VH+ + R S F+ LI +Y++C + +AR VF M +++
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYD 219
V+S+ MIS + G + +A+N F M+ G PN+ T + N
Sbjct: 321 VISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALL--------------NAC 366
Query: 220 AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
+H LLD+ + + + +F P+ + C I+ ++G EEA +R +
Sbjct: 367 SH----GGLLDIGLE--VFNSMKRVFNVEPQIEHYGC--IVDLLGRVGRLEEA---YRFI 415
Query: 280 RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP---SYVVLQNSLIDMYSKC 336
++ +++ ++L+A +++ G+++ + SE P +YV+L N +Y+
Sbjct: 416 ENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSN----LYASS 471
Query: 337 GNLTYSRRIFDTMQERTV 354
G S I ++M++ +
Sbjct: 472 GKWKESTEIRESMRDSGI 489
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 178/554 (32%), Positives = 284/554 (51%), Gaps = 85/554 (15%)
Query: 89 GHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRY-LPSVFLRTRLIVLYTKCDSLRD 147
G + F +LL +C ++L++G+ +H H+ T + P+ L LI +Y KC D
Sbjct: 41 GIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPID 100
Query: 148 A-------------------------------RHVFDEMPERNVVSWTAMISAYSQRGYA 176
A R VFD MPER+VVSW M+ Y+Q G
Sbjct: 101 ACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNL 160
Query: 177 SQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAHVYVGSSL 228
+AL + + RSG + NEF+FA + + L RQ H ++ + + ++V + S+
Sbjct: 161 HEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSI 220
Query: 229 LDMYAKDGKIHEARGIFE------------------------------C-LPERDVVSCT 257
+D YAK G++ A+ F+ C +PE++ VS T
Sbjct: 221 IDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWT 280
Query: 258 AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
A+I+GY + G ALDLFR++ G++ T++S L A + +ASL HGK++H +++R+
Sbjct: 281 ALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT 340
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER-TVMSWNAMLVGYGKHGEGREVLEL 376
V ++ +SLIDMYSK G+L S R+F ++ + WN M+ +HG G + L +
Sbjct: 341 NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRM 400
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
M + V+P+ T++ +L+ CSH GL + GL F MT + G+ P +EHY C++DL
Sbjct: 401 LDDMI-KFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTV-QHGIVPDQEHYACLIDL 458
Query: 437 LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNY 496
LGRAG +E I++MPFEP IW ++LG C +H N ++G L++++ ++ Y
Sbjct: 459 LGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPY 518
Query: 497 FFLSXD---------VRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRS--HPRREE 545
LS V LR +M K+ V KE S IE+++ + F SD S H R+EE
Sbjct: 519 ILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEE 578
Query: 546 VYIKVKELSVRFKE 559
+Y + L+ +E
Sbjct: 579 IYFILHNLAAVIEE 592
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 250 ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQ 309
+R + + +S +A +A+ L +G++ + AS+L SL GK
Sbjct: 8 KRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 310 VHNH--VLRSEVPSYVVLQNSLIDMYSKCGN----------------------------- 338
+H H + + P+ +L N LI MY KCG
Sbjct: 68 IHRHLKITGFKRPN-TLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKS 126
Query: 339 --LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
L +R +FD+M ER V+SWN M++GY + G E L + R +K + + +
Sbjct: 127 GMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSG-IKFNEFSFAGL 185
Query: 397 LSGC 400
L+ C
Sbjct: 186 LTAC 189
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 280/512 (54%), Gaps = 30/512 (5%)
Query: 88 CGHDMKFKG-------YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYT 140
C H+M +G +++L C + + L G VH ++K S+++ ++ +Y
Sbjct: 98 CFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYA 157
Query: 141 KCD-SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE--PNEFT 197
C ++ A +F ++ +N V+WT +I+ ++ G L ++ QML E P T
Sbjct: 158 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 217
Query: 198 FATVXS------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
A S G+QIH+ +IK + +++ V +S+LD+Y + G + EA+ F + ++
Sbjct: 218 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVH 311
D+++ +IS + EAL +F++ +G N T+ S++ A + +A+L+ G+Q+H
Sbjct: 278 DLITWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336
Query: 312 NHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF-DTMQERTVMSWNAMLVGYGKHGEG 370
+ R V L N+LIDMY+KCGN+ S+R+F + + R ++SW +M++GYG HG G
Sbjct: 337 GRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 371 REVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
E +ELF M ++PD + +AVLS C H GL ++GL F M S + G+ P ++ Y
Sbjct: 397 AEAVELFDKMVSSG-IRPDRIVFMAVLSACRHAGLVEKGLKYFNVMES-EYGINPDRDIY 454
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHS-NVDIGVFVGHRLLEIE 489
CVVDLLGRAG++ EA+E +++MPF+P + WG++LGAC H N I +++E++
Sbjct: 455 NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELK 514
Query: 490 TGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSH 540
G Y LS D +R MM KE G S I ++ + +F SD+
Sbjct: 515 PKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMC 574
Query: 541 PRREEVYIKVKELSVRFKEAGYVPDLSCVLHD 572
P VY + L +EAGYVP+L +++D
Sbjct: 575 PNASSVYSVLGLLIEETREAGYVPELDSLVND 606
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 109/389 (28%), Positives = 190/389 (48%), Gaps = 58/389 (14%)
Query: 130 FLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRS 189
L T LIV Y + + +AR +FDEMP+R+VV+WTAMI+ Y+ Y ++A F +M++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 190 GTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEA 241
GT PNEFT ++V G +H +++K + +YV +++++MYA EA
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 242 RGIFECLPERDV-----VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
CL RD+ V+ T +I+G+ LG L +++Q+ E + VT +
Sbjct: 166 ----ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAE---VTPYCITI 218
Query: 297 ALSGLASLDH---GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT 353
A+ AS+D GKQ+H V++ S + + NS++D+Y +CG L+ ++ F M+++
Sbjct: 219 AVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKD 278
Query: 354 VMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS-----------H 402
+++WN L+ + + E L +F + V P+ T ++++ C+ H
Sbjct: 279 LITWNT-LISELERSDSSEALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQQLH 336
Query: 403 GGLEDRGLDIFYDMTS------GKIGVEPKKEH-YGCVVDL------------LGRAGRV 443
G + RG + ++ + K G P + +G +VD G G
Sbjct: 337 GRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 444 EEAFEFIKKM---PFEPTAAIWGSLLGAC 469
EA E KM P ++ ++L AC
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLSAC 425
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 126/248 (50%), Gaps = 7/248 (2%)
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
H + ++L+ Y + G + EAR +F+ +P+RDVV+ TA+I+GYA + A + F ++
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 281 GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCG-NL 339
+G N T +SVL + + L +G VH V++ + + + N++++MY+ C +
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 340 TYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN-EVKPDGVTMLAVLS 398
+ IF ++ + ++W ++ G+ G+G L+++ M EN EV P +T +AV +
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT-IAVRA 222
Query: 399 GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPT 458
S + G I + K G + ++DL R G + EA + +M +
Sbjct: 223 SASIDSVTT-GKQIHASVI--KRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-DKD 278
Query: 459 AAIWGSLL 466
W +L+
Sbjct: 279 LITWNTLI 286
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/467 (36%), Positives = 267/467 (57%), Gaps = 24/467 (5%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
++ C L G+ +H +K + ++ + L+ +Y KCD L AR VF +MP +++
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL 274
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSL 212
V+W +MI Y +G + + + +M+ GT P++ T ++ + G+ IH
Sbjct: 275 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY 334
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVV-SCTAIISGYAQLGLDEE 271
+I+S +A +YV SL+D+Y K G+ + A +F ++DV S +IS Y +G +
Sbjct: 335 VIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS-KTQKDVAESWNVMISSYISVGNWFK 393
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
A++++ Q+ G++ + VT+ SVL A S LA+L+ GKQ+H + S + + +L ++L+D
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLD 453
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
MYSKCGN + RIF+++ ++ V+SW M+ YG HG+ RE L F M++ +KPDGV
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFG-LKPDGV 512
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
T+LAVLS C H GL D GL F M S K G+EP EHY C++D+LGRAGR+ EA+E I+
Sbjct: 513 TLLAVLSACGHAGLIDEGLKFFSQMRS-KYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571
Query: 452 KMP-FEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFL--------SXD 502
+ P A + +L AC +H +G + L+E +A Y L S D
Sbjct: 572 QTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWD 631
Query: 503 -VRSLRDMMLKKAVMKEPGRSRIEL-DQVLHTFHASDRSHPRREEVY 547
R +R M + + K+PG S IE+ D+V H F A DRSH R E VY
Sbjct: 632 AARRVRLKMKEMGLRKKPGCSWIEMSDKVCH-FFAEDRSHLRAENVY 677
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 167/316 (52%), Gaps = 16/316 (5%)
Query: 99 ALLNECV-SKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+LL EC S ++LR + VH ++ V L LI +Y C ARHVF+
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 158 R-NVVSWTAMISAYSQRGYASQALNLFVQMLR-SGTEPNEFTFATVXS--------MLGR 207
R +V W +++S YS+ L +F ++L S P+ FTF V LGR
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
IH+L++KS Y V V SSL+ MYAK + +F+ +PERDV S +IS + Q G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS--EVPSYVVL 325
E+AL+LF ++ G + N V+ ++A S L L+ GK++H ++ E+ YV
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYV-- 245
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
++L+DMY KC L +R +F M +++++WN+M+ GY G+ + +E+ M E
Sbjct: 246 NSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEG- 304
Query: 386 VKPDGVTMLAVLSGCS 401
+P T+ ++L CS
Sbjct: 305 TRPSQTTLTSILMACS 320
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 265/472 (56%), Gaps = 21/472 (4%)
Query: 115 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRG 174
+ HAH++K F+R LI Y+ A +FD +++VV+WTAMI + + G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 175 YASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSN-YDAHVYVG 225
AS+A+ FV+M ++G NE T +V GR +H L +++ V++G
Sbjct: 184 SASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIG 243
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ 285
SSL+DMY K +A+ +F+ +P R+VV+ TA+I+GY Q ++ + +F ++ +
Sbjct: 244 SSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA 303
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRI 345
N T +SVL+A + + +L G++VH +++++ + +LID+Y KCG L + +
Sbjct: 304 PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILV 363
Query: 346 FDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
F+ + E+ V +W AM+ G+ HG R+ +LF M + V P+ VT +AVLS C+HGGL
Sbjct: 364 FERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTML-SSHVSPNEVTFMAVLSACAHGGL 422
Query: 406 EDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSL 465
+ G +F M G+ +EPK +HY C+VDL GR G +EEA I++MP EPT +WG+L
Sbjct: 423 VEEGRRLFLSM-KGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL 481
Query: 466 LGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVM 516
G+C +H + ++G + R+++++ ++G Y L+ +V +R M + V+
Sbjct: 482 FGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVV 541
Query: 517 KEPGRSRIELDQVLHTFHASDRSHP-RREEVYIKVKELSVRFKEAGYVPDLS 567
K PG S IE+ L F A D P +++Y + + V+ + + D++
Sbjct: 542 KSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELEDVT 593
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 172/354 (48%), Gaps = 14/354 (3%)
Query: 129 VFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFV--QM 186
+FL L T R AR + ++ ++ W ++I +S ++ L+ M
Sbjct: 36 LFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHM 95
Query: 187 LRSGTEPNEFTFATVXSMLGR-------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIH 239
R+G P+ TF + + + Q H+ I+K D+ +V +SL+ Y+ G
Sbjct: 96 RRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFD 155
Query: 240 EARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS 299
A +F+ ++DVV+ TA+I G+ + G EA+ F +++ G+ +N +T SVL A
Sbjct: 156 FASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAG 215
Query: 300 GLASLDHGKQVHNHVLRS-EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWN 358
+ + G+ VH L + V V + +SL+DMY KC ++++FD M R V++W
Sbjct: 216 KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWT 275
Query: 359 AMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTS 418
A++ GY + + + +F M +++V P+ T+ +VLS C+H G RG + M
Sbjct: 276 ALIAGYVQSRCFDKGMLVFEEML-KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMI- 333
Query: 419 GKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
K +E ++DL + G +EEA +++ E W +++ + H
Sbjct: 334 -KNSIEINTTAGTTLIDLYVKCGCLEEAILVFERL-HEKNVYTWTAMINGFAAH 385
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 9/164 (5%)
Query: 95 KGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
K +++L+ C AL G+RVH +MIK + T LI LY KC L +A VF+
Sbjct: 307 KTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFER 366
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------G 206
+ E+NV +WTAMI+ ++ GYA A +LF ML S PNE TF V S G
Sbjct: 367 LHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEG 426
Query: 207 RQIH-SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
R++ S+ + N + + ++D++ + G + EA+ + E +P
Sbjct: 427 RRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMP 470
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 165/474 (34%), Positives = 262/474 (55%), Gaps = 29/474 (6%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+ +HA I + Y + + +LI Y KC R VFD M RNV++ TA+IS +
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVG 225
L LF M R PN T+ + + G+QIH+L+ K ++ + +
Sbjct: 235 ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE 294
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ 285
S+L+DMY+K G I +A IFE E D VS T I+ G AQ G +EEA+ F ++ G++
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 286 SNYVTYASVLTALSGLASLDH----GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
+ A+V++A+ G++ +D+ GKQ+H+ V++ + + N LI+MYSKCG+LT
Sbjct: 355 ID----ANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTD 410
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
S+ +F M +R +SWN+M+ + +HG G L+L+ M EVKP VT L++L CS
Sbjct: 411 SQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTL-EVKPTDVTFLSLLHACS 469
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAI 461
H GL D+G ++ +M G+EP+ EHY C++D+LGRAG ++EA FI +P +P I
Sbjct: 470 HVGLIDKGRELLNEMKEVH-GIEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKI 528
Query: 462 WGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDVRSLRDMMLKKA------- 514
W +LLGACS H + ++G + +L + ++ + ++ ++ S R ++A
Sbjct: 529 WQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIA-NIYSSRGKWKERAKTIKRMK 587
Query: 515 ---VMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPD 565
V KE G S IE++ H+F D+ HP+ E +Y + L + GY PD
Sbjct: 588 AMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGYRPD 641
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 174/351 (49%), Gaps = 23/351 (6%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPN 194
L+ LY KC L DA +FDEMP R+V+S + + + L +ML SG
Sbjct: 96 LLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGG--- 152
Query: 195 EFTFATVXSMLG-----------RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARG 243
F AT+ +L + IH+L I S YD + VG+ L+ Y K G RG
Sbjct: 153 -FDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRG 211
Query: 244 IFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLAS 303
+F+ + R+V++ TA+ISG + L E+ L LF +R + N VTY S L A SG
Sbjct: 212 VFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQR 271
Query: 304 LDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVG 363
+ G+Q+H + + + S + ++++L+DMYSKCG++ + IF++ E +S +LVG
Sbjct: 272 IVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVG 331
Query: 364 YGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGV 423
++G E ++ F M + V+ D + AVL G S D L + + S I
Sbjct: 332 LAQNGSEEEAIQFFIRMLQAG-VEIDANVVSAVL-GVS---FIDNSLGLGKQLHSLVIKR 386
Query: 424 EPKKEHY--GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+ + ++++ + G + ++ ++MP + W S++ A + H
Sbjct: 387 KFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMP-KRNYVSWNSMIAAFARH 436
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 150/287 (52%), Gaps = 18/287 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y + L C + + EGQ++HA + K + + + L+ +Y+KC S+ DA +F+
Sbjct: 259 YLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTT 318
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
E + VS T ++ +Q G +A+ F++ML++G E + + V + LG+Q
Sbjct: 319 EVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQ 378
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+HSL+IK + + +V + L++MY+K G + +++ +F +P+R+ VS ++I+ +A+ G
Sbjct: 379 LHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGH 438
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN-----HVLRSEVPSYV 323
AL L+ ++ ++ VT+ S+L A S + +D G+++ N H + Y
Sbjct: 439 GLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY- 497
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERT-VMSWNAMLVGYGKHGE 369
+IDM + G L ++ D++ + W A+L HG+
Sbjct: 498 ---TCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGD 541
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 125/267 (46%), Gaps = 19/267 (7%)
Query: 205 LGRQIHSLIIKS-------NYDAH---VYVGSSLLDMYAKDGKIHEARGIFECLPERDVV 254
LG +H+ IIK+ + D H + V +SLL +YAK GK+ +A +F+ +P RDV+
Sbjct: 63 LGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVI 122
Query: 255 SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV 314
S + G+ + E L +++ G G ++ T VL+ K +H
Sbjct: 123 SQNIVFYGFLRNRETESGFVLLKRMLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALA 181
Query: 315 LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVL 374
+ S + + N LI Y KCG R +FD M R V++ A++ G ++ + L
Sbjct: 182 ILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGL 241
Query: 375 ELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVV 434
LF+LMR V P+ VT L+ L+ CS G I + K G+E + ++
Sbjct: 242 RLFSLMR-RGLVHPNSVTYLSALAACSGSQRIVEGQQIHALL--WKYGIESELCIESALM 298
Query: 435 DLLGRAGRVEEAFEFIKKMPFEPTAAI 461
D+ + G +E+A+ FE T +
Sbjct: 299 DMYSKCGSIEDAWTI-----FESTTEV 320
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 96/185 (51%), Gaps = 21/185 (11%)
Query: 80 QPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLY 139
Q ++M G ++ +A+L +L G+++H+ +IK ++ + F+ LI +Y
Sbjct: 343 QFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMY 402
Query: 140 TKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
+KC L D++ VF MP+RN VSW +MI+A+++ G+ AL L+ +M +P + TF
Sbjct: 403 SKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFL 462
Query: 200 TVX---SMLG------------RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGI 244
++ S +G +++H + ++ + + ++DM + G + EA+
Sbjct: 463 SLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHY------TCIIDMLGRAGLLKEAKSF 516
Query: 245 FECLP 249
+ LP
Sbjct: 517 IDSLP 521
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 169/480 (35%), Positives = 266/480 (55%), Gaps = 27/480 (5%)
Query: 113 GQRVHAHMIKT-RYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYS 171
G++ H + K R LP V + + L+V+Y++C S+ + VF M ER+VVSW MISA+
Sbjct: 337 GRQFHGFVSKNFRELPIVIVNS-LMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFV 395
Query: 172 QRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVY 223
Q G + L L +M + G + + T + S +G+Q H+ +I+
Sbjct: 396 QNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-G 454
Query: 224 VGSSLLDMYAKDGKIHEARGIFEC--LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
+ S L+DMY+K G I ++ +FE ERD + ++ISGY Q G E+ +FR++
Sbjct: 455 MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLE 514
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
+ ++ N VT AS+L A S + S+D GKQ+H +R + V + ++L+DMYSK G + Y
Sbjct: 515 QNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKY 574
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ +F +ER +++ M++GYG+HG G + LF M+E +KPD +T +AVLS CS
Sbjct: 575 AEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESG-IKPDAITFVAVLSACS 633
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPT-AA 460
+ GL D GL IF +M ++P EHY C+ D+LGR GRV EA+EF+K + E A
Sbjct: 634 YSGLIDEGLKIFEEMRE-VYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAE 692
Query: 461 IWGSLLGACSVHSNVDIGVFVGHRLLEIETGN--AGNYFFLS---------XDVRSLRDM 509
+WGSLLG+C +H +++ V RL + + G +G LS V +R
Sbjct: 693 LWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRG 752
Query: 510 MLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCV 569
M +K + KE GRS IE+ ++ F + D+ HP E+Y + L+ + ++ L V
Sbjct: 753 MREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSFLTTLPTV 812
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 207/426 (48%), Gaps = 47/426 (11%)
Query: 108 RALREGQRVHAHMIK--TRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTA 165
R++++ + M+K Y+ +F+ + I +Y + + +R VFD ERN+ W
Sbjct: 228 RSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNT 287
Query: 166 MISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXSM--------LGRQIHSLIIKS 216
MI Y Q +++ LF++ + S +E T+ S LGRQ H + K+
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
+ + + +SL+ MY++ G +H++ G+F + ERDVVS +IS + Q GLD+E L L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKC 336
+++ +G + +Y+T ++L+A S L + + GKQ H ++R + + + + LIDMYSK
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI-QFEGMNSYLIDMYSKS 466
Query: 337 GNLTYSRRIFD--TMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTML 394
G + S+++F+ ER +WN+M+ GY ++G + +F M E+N ++P+ VT+
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQN-IRPNAVTVA 525
Query: 395 AVLSGCSHGGLEDRGLDI------------------FYDMTSGKIGV-----------EP 425
++L CS G D G + DM S + E
Sbjct: 526 SILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER 585
Query: 426 KKEHYGCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIWGSLLGACSVHSNVDIGVFVG 482
Y ++ G+ G E A M +P A + ++L ACS +D G+ +
Sbjct: 586 NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIF 645
Query: 483 HRLLEI 488
+ E+
Sbjct: 646 EEMREV 651
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 125/434 (28%), Positives = 212/434 (48%), Gaps = 55/434 (12%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRD------ARH 150
Y++ L C + L+ G+ VH H+I+ S + L+ +Y C + D R
Sbjct: 110 YSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRK 169
Query: 151 VFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--LGRQ 208
VFD M +NVV+W +IS Y + G ++A F M+R +P+ +F V + R
Sbjct: 170 VFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRS 229
Query: 209 I------HSLIIK--SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
I + L++K Y ++V SS + MYA+ G I +R +F+ ER++ +I
Sbjct: 230 IKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMI 289
Query: 261 SGYAQLGLDEEALDLFRQLRG-EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS-- 317
Y Q E+++LF + G + + S+ VTY +A+S L ++ G+Q H V ++
Sbjct: 290 GVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFR 349
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF 377
E+P +V+ NSL+ MYS+CG++ S +F +M+ER V+SWN M+ + ++G E L L
Sbjct: 350 ELP--IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 378 TLMREENEVKPDGVTMLAVLSGCSH----------------GGLEDRGLDIFY-DM--TS 418
M+++ K D +T+ A+LS S+ G++ G++ + DM S
Sbjct: 408 YEMQKQG-FKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKS 466
Query: 419 GKIGVEPK-----------KEHYGCVVDLLGRAGRVEEAFEFIKKM---PFEPTAAIWGS 464
G I + K + + ++ + G E+ F +KM P A S
Sbjct: 467 GLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVAS 526
Query: 465 LLGACSVHSNVDIG 478
+L ACS +VD+G
Sbjct: 527 ILPACSQIGSVDLG 540
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 14/251 (5%)
Query: 227 SLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS 286
S L +DG AR +F+ +P+ V II G+ L EAL + +++ +
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 287 N--YVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN----LT 340
N TY+S L A + +L GK VH H++R S V+ NSL++MY C N
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 341 YS--RRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLS 398
Y R++FD M+ + V++WN ++ Y K G E F +M EVKP V+ + V
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRM-EVKPSPVSFVNVFP 222
Query: 399 GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY--GCVVDLLGRAGRVEEAFEFIKKMPFE 456
S + ++FY + K+G E K+ + + + G +E + E
Sbjct: 223 AVSI-SRSIKKANVFYGLML-KLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSC-VE 279
Query: 457 PTAAIWGSLLG 467
+W +++G
Sbjct: 280 RNIEVWNTMIG 290
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 130/272 (47%), Gaps = 18/272 (6%)
Query: 148 ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG--TEPNEFTFATVXSM- 204
AR +FD +P+ V W +I + +AL + +M ++ T + +T+++
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 205 -------LGRQIHSLIIKSNYDAHVYVGSSLLDMY-----AKDGKIHE-ARGIFECLPER 251
G+ +H +I+ ++ V +SL++MY A D ++ R +F+ + +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVH 311
+VV+ +IS Y + G + EA F + ++ + V++ +V A+S S+ +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 312 NHVLR--SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE 369
+L+ E + + +S I MY++ G++ SRR+FD+ ER + WN M+ Y ++
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDC 297
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
E +ELF E+ D VT L S S
Sbjct: 298 LVESIELFLEAIGSKEIVSDEVTYLLAASAVS 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L C ++ G+++H I+ +VF+ + L+ +Y+K +++ A +F + ER
Sbjct: 526 SILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKER 585
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
N V++T MI Y Q G +A++LF+ M SG +P+ TF V S
Sbjct: 586 NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLS 630
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/454 (35%), Positives = 249/454 (54%), Gaps = 21/454 (4%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G+ VHA + K + + + L+ LY+KC DA VF M E+++V+W ++IS +
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCK 451
Query: 173 RGYASQALNLFVQMLRS--GTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHV 222
G +AL +F M +P+ +V + G Q+H +IK+ +V
Sbjct: 452 NGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNV 511
Query: 223 YVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE 282
+VGSSL+D+Y+K G A +F + ++V+ ++IS Y++ L E ++DLF + +
Sbjct: 512 FVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQ 571
Query: 283 GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYS 342
G+ + V+ SVL A+S ASL GK +H + LR +PS L+N+LIDMY KCG Y+
Sbjct: 572 GIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYA 631
Query: 343 RRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH 402
IF MQ +++++WN M+ GYG HG+ L LF M++ E PD VT L+++S C+H
Sbjct: 632 ENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGE-SPDDVTFLSLISACNH 690
Query: 403 GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIW 462
G + G +IF M G+EP EHY +VDLLGRAG +EEA+ FIK MP E ++IW
Sbjct: 691 SGFVEEGKNIFEFMKQ-DYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIW 749
Query: 463 GSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYF---------FLSXDVRSLRDMMLKK 513
LL A H NV++G+ +LL +E Y L + L +M +K
Sbjct: 750 LCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEK 809
Query: 514 AVMKEPGRSRIELDQVLHTFHASDRSHPRREEVY 547
+ K+PG S IE+ + F + S P + E++
Sbjct: 810 GLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIF 843
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 196/377 (51%), Gaps = 18/377 (4%)
Query: 111 REGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER-NVVSWTAMISA 169
EG+++H M++ FL+T LI +Y K DA VF E+ ++ NVV W MI
Sbjct: 187 EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 170 YSQRGYASQALNLFVQMLRSGTE--PNEFTFA------TVXSMLGRQIHSLIIKSNYDAH 221
+ G +L+L++ + + FT A + S GRQIH ++K
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
YV +SLL MY+K G + EA +F C+ ++ + A+++ YA+ ALDLF +R
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
+ + + T ++V++ S L ++GK VH + + + S ++++L+ +YSKCG
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPD 426
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE-VKPDGVTMLAVLSGC 400
+ +F +M+E+ +++W +++ G K+G+ +E L++F M+++++ +KPD M +V + C
Sbjct: 427 AYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC 486
Query: 401 SHGGLEDR--GLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPT 458
+ GLE GL + M K G+ ++DL + G E A + M E
Sbjct: 487 A--GLEALRFGLQVHGSMI--KTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM 542
Query: 459 AAIWGSLLGACSVHSNV 475
A W S++ +C +N+
Sbjct: 543 VA-WNSMI-SCYSRNNL 557
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 189/392 (48%), Gaps = 23/392 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +LL C + L G+ +H ++ + F+ T L+ +Y KC L A VFD
Sbjct: 63 FPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 122
Query: 157 E-------RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---- 205
+ R+V W +MI Y + + + F +ML G P+ F+ + V S++
Sbjct: 123 QSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
Query: 206 ------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIF-ECLPERDVVSCTA 258
G+QIH +++++ D ++ ++L+DMY K G +A +F E + +VV
Sbjct: 183 NFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
+I G+ G+ E +LDL+ + ++ ++ L A S + G+Q+H V++
Sbjct: 243 MIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT 378
+ + + SL+ MYSKCG + + +F + ++ + WNAM+ Y ++ G L+LF
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 379 LMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLG 438
MR+++ V PD T+ V+S CS GL + G + ++ I E ++ L
Sbjct: 363 FMRQKS-VLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYS 419
Query: 439 RAGRVEEAFEFIKKMPFEPTAAIWGSLL-GAC 469
+ G +A+ K M E WGSL+ G C
Sbjct: 420 KCGCDPDAYLVFKSME-EKDMVAWGSLISGLC 450
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 187/368 (50%), Gaps = 15/368 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ L C G+++H ++K ++ T L+ +Y+KC + +A VF +
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
++ + W AM++AY++ Y AL+LF M + P+ FT + V S G+
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H+ + K + + S+LL +Y+K G +A +F+ + E+D+V+ ++ISG + G
Sbjct: 395 VHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454
Query: 269 DEEALDLFRQLR--GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
+EAL +F ++ + ++ + SV A +GL +L G QVH ++++ + V +
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG 514
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
+SLID+YSKCG + ++F +M +++WN+M+ Y ++ ++LF LM + +
Sbjct: 515 SSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG-I 573
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIF-YDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
PD V++ +VL S +G + Y + ++G+ ++D+ + G +
Sbjct: 574 FPDSVSITSVLVAISSTASLLKGKSLHGYTL---RLGIPSDTHLKNALIDMYVKCGFSKY 630
Query: 446 AFEFIKKM 453
A KKM
Sbjct: 631 AENIFKKM 638
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 115/220 (52%), Gaps = 8/220 (3%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++ N C ALR G +VH MIKT + +VF+ + LI LY+KC A VF M
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE 540
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV-------XSML-GRQIH 210
N+V+W +MIS YS+ +++LF ML G P+ + +V S+L G+ +H
Sbjct: 541 NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLH 600
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
++ + ++ ++L+DMY K G A IF+ + + +++ +I GY G
Sbjct: 601 GYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCI 660
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQV 310
AL LF +++ G + VT+ S+++A + ++ GK +
Sbjct: 661 TALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNI 700
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 27/323 (8%)
Query: 167 ISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-----------GRQIHSLIIK 215
I A Q+G QAL+L+ + G+ P + T S+L G+ IH ++
Sbjct: 31 IRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVV 88
Query: 216 SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE-------RDVVSCTAIISGYAQLGL 268
+ ++ +SL++MY K G + A +F+ + RDV ++I GY +
Sbjct: 89 LGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRR 148
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASL--DHGKQVHNHVLRSEVPSYVVLQ 326
+E + FR++ G++ + + + V++ + + + GKQ+H +LR+ + + L+
Sbjct: 149 FKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLK 208
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERT-VMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
+LIDMY K G + R+F +++++ V+ WN M+VG+G G L+L+ L + N
Sbjct: 209 TALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK-NNS 267
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
VK + L CS G I D+ K+G+ ++ + + G V E
Sbjct: 268 VKLVSTSFTGALGACSQSENSGFGRQIHCDVV--KMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 446 AFEFIKKMPFEPTAAIWGSLLGA 468
A E + + IW +++ A
Sbjct: 326 A-ETVFSCVVDKRLEIWNAMVAA 347
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 168/573 (29%), Positives = 301/573 (52%), Gaps = 35/573 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLR-DARHVFDEM 155
Y+A+L+ C + R+L G+++H+ IK + S + L+ +Y KC + +A VF M
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR-------- 207
NVVSWT +I G+ L ++M++ EPN T + V +
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
+IH+ +++ + D + VG+SL+D YA K+ A + + RD ++ T++++ + +LG
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
E AL + + G+G++ + ++ ++A + L +L+ GK +H + ++S + N
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
SL+DMYSKCG+L ++++F+ + V+SWN ++ G +G L F MR + E +
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMK-ETE 626
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI-GVEPKKEHYGCVVDLLGRAGRVEEA 446
PD VT L +LS CS+G L D GL+ F M KI +EP+ EHY +V +LGRAGR+EEA
Sbjct: 627 PDSVTFLILLSACSNGRLTDLGLEYFQVMK--KIYNIEPQVEHYVHLVGILGRAGRLEEA 684
Query: 447 FEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS------ 500
++ M +P A I+ +LL AC N+ +G + ++ L + + Y L+
Sbjct: 685 TGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDES 744
Query: 501 ---XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSH-PRREEVYIKVKELSVR 556
+ R++M +K + K+ G+S +E+ +H+F + D + + +Y +++ +
Sbjct: 745 GKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEE 804
Query: 557 FKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDC 616
K G + + HS K A+ +G I P+ V+KN +C DC
Sbjct: 805 IKRFG------------SPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDC 852
Query: 617 HNFAKYISKIYGREVSLRDKNRFHQIVGGKCSC 649
H F ++++ +++++RD N+ H G+CSC
Sbjct: 853 HEFVSILTRLVDKKITVRDGNQVHIFKNGECSC 885
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 193/375 (51%), Gaps = 13/375 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L+ C S + R G +H +IK L ++ L L+ LY K D + +AR +FDEM R
Sbjct: 30 ILSFCESNSS-RIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRT 88
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHS 211
V +WT MISA+++ + AL+LF +M+ SGT PNEFTF++V G ++H
Sbjct: 89 VFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHG 148
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
+IK+ ++ + VGSSL D+Y+K G+ EA +F L D +S T +IS E
Sbjct: 149 SVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWRE 208
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL + ++ G+ N T+ +L A S L L+ GK +H++++ +P VVL+ SL+D
Sbjct: 209 ALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVD 267
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
YS+ + + R+ ++ E+ V W +++ G+ ++ +E + F MR ++P+
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG-LQPNNF 326
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
T A+LS CS D G I K+G E + +VD+ + E +
Sbjct: 327 TYSAILSLCSAVRSLDFGKQIHSQTI--KVGFEDSTDVGNALVDMYMKCSASEVEASRVF 384
Query: 452 KMPFEPTAAIWGSLL 466
P W +L+
Sbjct: 385 GAMVSPNVVSWTTLI 399
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 175/327 (53%), Gaps = 14/327 (4%)
Query: 85 MALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 144
MA H +F +++++ C R + G RVH +IKT + + + + L LY+KC
Sbjct: 116 MASGTHPNEFT-FSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 145 LRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM 204
++A +F + + +SWT MIS+ +AL + +M+++G PNEFTF +
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 205 -------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCT 257
G+ IHS II +V + +SL+D Y++ K+ +A + E+DV T
Sbjct: 235 SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWT 294
Query: 258 AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
+++SG+ + +EA+ F ++R G+Q N TY+++L+ S + SLD GKQ+H+ ++
Sbjct: 295 SVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Query: 318 EVPSYVVLQNSLIDMYSKC-GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLEL 376
+ N+L+DMY KC + + R+F M V+SW +++G HG V +
Sbjct: 355 GFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHG---FVQDC 411
Query: 377 FTLMRE--ENEVKPDGVTMLAVLSGCS 401
F L+ E + EV+P+ VT+ VL CS
Sbjct: 412 FGLLMEMVKREVEPNVVTLSGVLRACS 438
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/419 (37%), Positives = 239/419 (57%), Gaps = 44/419 (10%)
Query: 140 TKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
K LRDAR +FDEMP+R+++SW M+ Y++ S+A LF +M E N +++
Sbjct: 196 VKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKM----PERNTVSWS 251
Query: 200 TVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE--CLPERDVVSCT 257
T+ ++G Y+K G + AR +F+ LP ++VV+ T
Sbjct: 252 TM--VMG-------------------------YSKAGDMEMARVMFDKMPLPAKNVVTWT 284
Query: 258 AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
II+GYA+ GL +EA L Q+ G++ + S+L A + L G ++H+ + RS
Sbjct: 285 IIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF 377
+ S + N+L+DMY+KCGNL + +F+ + ++ ++SWN ML G G HG G+E +ELF
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
+ MR E ++PD VT +AVL C+H GL D G+D FY M + P+ EHYGC+VDLL
Sbjct: 405 SRMRREG-IRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEK-VYDLVPQVEHYGCLVDLL 462
Query: 438 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYF 497
GR GR++EA + ++ MP EP IWG+LLGAC +H+ VDI V L++++ + GNY
Sbjct: 463 GRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYS 522
Query: 498 FLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVY 547
LS V +R M V K G S +EL+ +H F D+SHP+ +++Y
Sbjct: 523 LLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIY 581
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/267 (31%), Positives = 148/267 (55%), Gaps = 33/267 (12%)
Query: 133 TRLIVLYTKCDSLRDARHVFDEMP--ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG 190
+ +++ Y+K + AR +FD+MP +NVV+WT +I+ Y+++G +A L QM+ SG
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 191 TEPNEFTFATVXSML-----------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIH 239
+ F A V S+L G +IHS++ +SN ++ YV ++LLDMYAK G +
Sbjct: 311 LK---FDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLK 367
Query: 240 EARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS 299
+A +F +P++D+VS ++ G G +EA++LF ++R EG++ + VT+ +VL + +
Sbjct: 368 KAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Query: 300 GLASLDHG-------KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM-QE 351
+D G ++V++ L +V Y L+D+ + G L + ++ TM E
Sbjct: 428 HAGLIDEGIDYFYSMEKVYD--LVPQVEHY----GCLVDLLGRVGRLKEAIKVVQTMPME 481
Query: 352 RTVMSWNAMLVGYGKHGE---GREVLE 375
V+ W A+L H E +EVL+
Sbjct: 482 PNVVIWGALLGACRMHNEVDIAKEVLD 508
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 176/375 (46%), Gaps = 24/375 (6%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
L + +++HA +I+ + + +LI + C A VF+++ E NV ++I A
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRA 91
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ--------IHSLIIKSNYDAH 221
++Q QA +F +M R G + FT+ + Q +H+ I K +
Sbjct: 92 HAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSD 151
Query: 222 VYVGSSLLDMYAKDG--KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
+YV ++L+D Y++ G + +A +FE + ERD VS +++ G + G +A LF ++
Sbjct: 152 IYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEM 211
Query: 280 RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNL 339
Q + +++ ++L + + ++ + S+ ++++ YSK G++
Sbjct: 212 P----QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSW----STMVMGYSKAGDM 263
Query: 340 TYSRRIFDTM--QERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
+R +FD M + V++W ++ GY + G +E L M +K D ++++L
Sbjct: 264 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG-LKFDAAAVISIL 322
Query: 398 SGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEP 457
+ C+ GL G+ I + +G ++D+ + G +++AF+ +P +
Sbjct: 323 AACTESGLLSLGMRIHSILKRSNLG--SNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 458 TAAIWGSLLGACSVH 472
+ W ++L VH
Sbjct: 381 LVS-WNTMLHGLGVH 394
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 97/207 (46%), Gaps = 19/207 (9%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
QM G ++L C L G R+H+ + ++ + ++ L+ +Y KC
Sbjct: 305 QMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCG 364
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
+L+ A VF+++P++++VSW M+ G+ +A+ LF +M R G P++ TF V
Sbjct: 365 NLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAV-- 422
Query: 204 MLGRQIHSLIIKSNYD------------AHVYVGSSLLDMYAKDGKIHEARGIFECLP-E 250
L H+ +I D V L+D+ + G++ EA + + +P E
Sbjct: 423 -LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPME 481
Query: 251 RDVVSCTAIISG---YAQLGLDEEALD 274
+VV A++ + ++ + +E LD
Sbjct: 482 PNVVIWGALLGACRMHNEVDIAKEVLD 508
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 282 bits (722), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 152/434 (35%), Positives = 248/434 (57%), Gaps = 23/434 (5%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
L G++VH + +K+ + + + + L LY+KC SL ++ +F +P ++ W +MIS
Sbjct: 466 LNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAH 221
+++ GY +A+ LF +ML GT P+E T A V ++ G++IH +++ D
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG 585
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
+ +GS+L++MY+K G + AR +++ LPE D VSC+++ISGY+Q GL ++ LFR +
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM 645
Query: 282 EGMQSNYVTYASVL--TALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNL 339
G + +S+L ALS +SL G QVH ++ + + + + +SL+ MYSK G++
Sbjct: 646 SGFTMDSFAISSILKAAALSDESSL--GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 703
Query: 340 TYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG 399
+ F + +++W A++ Y +HG+ E L+++ LM+E+ KPD VT + VLS
Sbjct: 704 DDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKG-FKPDKVTFVGVLSA 762
Query: 400 CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTA 459
CSHGGL + M G+EP+ HY C+VD LGR+GR+ EA FI M +P A
Sbjct: 763 CSHGGLVEESYFHLNSMVK-DYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 460 AIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMM 510
+WG+LL AC +H V++G + +E+E +AG Y LS +V R +M
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLM 881
Query: 511 LKKAVMKEPGRSRI 524
V KEPG S +
Sbjct: 882 KGTGVQKEPGWSSV 895
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/398 (30%), Positives = 211/398 (53%), Gaps = 25/398 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y+++L C S LR G+ V A +IK VF+ T ++ LY KC + +A VF +P
Sbjct: 254 YSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP 312
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR--------Q 208
+VVSWT M+S Y++ A AL +F +M SG E N T +V S GR Q
Sbjct: 313 NPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQ 372
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE---RDVVSCTAIISGYAQ 265
+H+ + KS + V ++L+ MY+K G I + +FE L + +++V+ +I+ ++Q
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQ 430
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
+A+ LF ++ EG++++ SV + LS L L+ GKQVH + L+S + + +
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEF---SVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
+SL +YSKCG+L S ++F + + W +M+ G+ ++G RE + LF+ M ++
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG- 546
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIF-YDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
PD T+ AVL+ CS RG +I Y + + G++ + +V++ + G ++
Sbjct: 547 TSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL---RAGIDKGMDLGSALVNMYSKCGSLK 603
Query: 445 EAFEFIKKMP-FEPTAAIWGSLLGACSVHSNVDIGVFV 481
A + ++P +P + SL+ S H + G +
Sbjct: 604 LARQVYDRLPELDPVSC--SSLISGYSQHGLIQDGFLL 639
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 200/387 (51%), Gaps = 14/387 (3%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVF---DE 154
++++ C + E +VHA + K+ + + LI +Y+K + + VF D+
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-----GRQI 209
+ +N+V+ MI+++SQ +A+ LF +ML+ G +EF+ ++ S+L G+Q+
Sbjct: 415 IQRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQV 472
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H +KS + VGSSL +Y+K G + E+ +F+ +P +D ++ISG+ + G
Sbjct: 473 HGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYL 532
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
EA+ LF ++ +G + T A+VLT S SL GK++H + LR+ + + L ++L
Sbjct: 533 REAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSAL 592
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
++MYSKCG+L +R+++D + E +S ++++ GY +HG ++ LF M D
Sbjct: 593 VNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG-FTMD 651
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF 449
+ ++L + G + +T KIG+ + ++ + + G +++ +
Sbjct: 652 SFAISSILKAAALSDESSLGAQVHAYIT--KIGLCTEPSVGSSLLTMYSKFGSIDDCCKA 709
Query: 450 IKKMPFEPTAAIWGSLLGACSVHSNVD 476
++ P W +L+ + + H +
Sbjct: 710 FSQIN-GPDLIAWTALIASYAQHGKAN 735
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 149/300 (49%), Gaps = 11/300 (3%)
Query: 110 LREGQRVHAHMIKTRYLP-SVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
LR + + AH+++ LP VFL L+ Y+ S+ DA +FD +P+ +VVS MIS
Sbjct: 64 LRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMIS 123
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDA 220
Y Q ++L F +M G E NE ++ +V S + + IK Y
Sbjct: 124 GYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFF 183
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
+ V S+L+D+++K+ + +A +F +V II+G + DLF ++
Sbjct: 184 YEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 243
Query: 281 GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLT 340
+ + TY+SVL A + L L GK V V++ V + +++D+Y+KCG++
Sbjct: 244 VGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMA 302
Query: 341 YSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
+ +F + +V+SW ML GY K + LE+F MR V+ + T+ +V+S C
Sbjct: 303 EAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG-VEINNCTVTSVISAC 361
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 193/400 (48%), Gaps = 33/400 (8%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M G + Y ++++ C + +A + V H IK Y + + LI +++K
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
DA VF + NV W +I+ + +LF +M +P+ +T+++V +
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 204 M--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS 255
G+ + + +IK + V+V ++++D+YAK G + EA +F +P VVS
Sbjct: 260 ACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVS 318
Query: 256 CTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
T ++SGY + AL++F+++R G++ N T SV++A + + QVH V
Sbjct: 319 WTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVF 378
Query: 316 RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF---DTMQERTVMSWNAMLVGYGKHGEGRE 372
+S + +LI MYSK G++ S ++F D +Q + ++ N M+ + + + +
Sbjct: 379 KSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGK 436
Query: 373 VLELFTLMREENEVKPDGVTMLAVLS--GCSHGGLEDRGLD----IFYDMTSGKIGVEPK 426
+ LFT M +E ++ D ++ ++LS C + G + G + D+T G
Sbjct: 437 AIRLFTRMLQEG-LRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGS------ 489
Query: 427 KEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
+ L + G +EE+++ + +PF+ A W S++
Sbjct: 490 -----SLFTLYSKCGSLEESYKLFQGIPFKDNAC-WASMI 523
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 9/247 (3%)
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
V++ SLL Y+ G + +A +F+ +P+ DVVSC +ISGY Q L EE+L F ++
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
G ++N ++Y SV++A S L + + V H ++ Y V++++LID++SK
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ ++F V WN ++ G ++ V +LF M + KPD T +VL+ C+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVLAACA 262
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC--VVDLLGRAGRVEEAFEFIKKMPFEPTA 459
LE K G E + + C +VDL + G + EA E ++P P+
Sbjct: 263 --SLEKLRFGKVVQARVIKCGAE---DVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSV 316
Query: 460 AIWGSLL 466
W +L
Sbjct: 317 VSWTVML 323
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 62/119 (52%)
Query: 85 MALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 144
M + G M +++L G +VHA++ K + + L+ +Y+K S
Sbjct: 643 MVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGS 702
Query: 145 LRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
+ D F ++ ++++WTA+I++Y+Q G A++AL ++ M G +P++ TF V S
Sbjct: 703 IDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 260/481 (54%), Gaps = 28/481 (5%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
L C R ++ G+ +H H+I ++ ++ + L +YT+C ++D +F+ M ER+V
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV 275
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSL 212
VSWT++I AY + G +A+ F++M S PNE TFA++ S + G Q+H
Sbjct: 276 VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCN 335
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEA 272
++ + + V +S++ MY+ G + A +F+ + RD++S + II GY Q G EE
Sbjct: 336 VLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG 395
Query: 273 LDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDM 332
F +R G + AS+L+ +A ++ G+QVH L + +++SLI+M
Sbjct: 396 FKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINM 455
Query: 333 YSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK----P 388
YSKCG++ + IF ++S AM+ GY +HG+ +E ++LF E +K P
Sbjct: 456 YSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLF-----EKSLKVGFRP 510
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D VT ++VL+ C+H G D G +++M + P KEHYGC+VDLL RAGR+ +A +
Sbjct: 511 DSVTFISVLTACTHSGQLDLGFH-YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEK 569
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------- 501
I +M ++ +W +LL AC +++ G R+LE++ A L+
Sbjct: 570 MINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGN 629
Query: 502 --DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
+ ++R M K V+KEPG S I++ + F + DR HP+ E++Y + EL+V E
Sbjct: 630 LEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIY-NILELAVSGAE 688
Query: 560 A 560
A
Sbjct: 689 A 689
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 206/428 (48%), Gaps = 55/428 (12%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+ +L C + G+ +HA+ +KT L SV++ + L+ +Y + + + VF EMP
Sbjct: 112 SVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPF 171
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQI 209
RN V+WTA+I+ G + L F +M RS + +TFA G+ I
Sbjct: 172 RNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAI 231
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H+ +I + + V +SL MY + G++ + +FE + ERDVVS T++I Y ++G +
Sbjct: 232 HTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQE 291
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
+A++ F ++R + N T+AS+ +A + L+ L G+Q+H +VL + + + NS+
Sbjct: 292 VKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSM 351
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
+ MYS CGNL + +F M+ R ++SW+ ++ GY + G G E + F+ MR+ KP
Sbjct: 352 MKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSG-TKPT 410
Query: 390 GVTMLAVLS-----GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
+ ++LS GG + L + + G+E ++++ + G ++
Sbjct: 411 DFALASLLSVSGNMAVIEGGRQVHALALCF-------GLEQNSTVRSSLINMYSKCGSIK 463
Query: 445 EA----------------------------------FEFIKKMPFEPTAAIWGSLLGACS 470
EA FE K+ F P + + S+L AC+
Sbjct: 464 EASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACT 523
Query: 471 VHSNVDIG 478
+D+G
Sbjct: 524 HSGQLDLG 531
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 175/326 (53%), Gaps = 24/326 (7%)
Query: 88 CGHDMKFKGYN-ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLR 146
CG +F + +LL + V + +R +V M+K + P+ LR+ + +LR
Sbjct: 8 CGTIQRFCTTSISLLQKPVEENIVRISNQV---MVK--FDPNSHLRSLI-----NAGNLR 57
Query: 147 DARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM--LRSGTEPNEFTFATVXSM 204
AR VFD+MP ++VSWT++I Y + +AL LF M + P+ + V
Sbjct: 58 AARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKA 117
Query: 205 LGRQ--------IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSC 256
G+ +H+ +K++ + VYVGSSLLDMY + GKI ++ +F +P R+ V+
Sbjct: 118 CGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTW 177
Query: 257 TAIISGYAQLGLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
TAII+G G +E L F ++ R E + Y T+A L A +GL + +GK +H HV+
Sbjct: 178 TAIITGLVHAGRYKEGLTYFSEMSRSEELSDTY-TFAIALKACAGLRQVKYGKAIHTHVI 236
Query: 316 RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLE 375
+ + + NSL MY++CG + +F+ M ER V+SW +++V Y + G+ + +E
Sbjct: 237 VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVE 296
Query: 376 LFTLMREENEVKPDGVTMLAVLSGCS 401
F MR ++V P+ T ++ S C+
Sbjct: 297 TFIKMR-NSQVPPNEQTFASMFSACA 321
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 172/348 (49%), Gaps = 30/348 (8%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ ++ + C S L G+++H +++ S+ + ++ +Y+ C +L A +F M
Sbjct: 313 FASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMR 372
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
R+++SW+ +I Y Q G+ + F M +SGT+P +F A++ S+ GRQ
Sbjct: 373 CRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQ 432
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H+L + + + V SSL++MY+K G I EA IF D+VS TA+I+GYA+ G
Sbjct: 433 VHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGK 492
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV-----LRSEVPSYV 323
+EA+DLF + G + + VT+ SVLTA + LD G N + +R Y
Sbjct: 493 SKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHY- 551
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQ-ERTVMSWNAMLVGYGKHGE---GREVLELFTL 379
++D+ + G L+ + ++ + M ++ + W +L+ G+ GR E
Sbjct: 552 ---GCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAERIL- 607
Query: 380 MREENEVKPDGVTMLAVLSG--CSHGGLEDRGLDIFYDMTSGKIGVEP 425
E+ P T L L+ S G LE+ ++ +M + + EP
Sbjct: 608 -----ELDPTCATALVTLANIYSSTGNLEEAA-NVRKNMKAKGVIKEP 649
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 166/500 (33%), Positives = 266/500 (53%), Gaps = 51/500 (10%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
++VH +I+ + VF+ +I YTKCD++ AR VFDEM ER+VVSW +MIS YSQ
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQ 210
Query: 173 RGYASQALNLFVQMLR-SGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAHVY 223
G ++ ML S +PN T +V + G ++H +I+++ +
Sbjct: 211 SGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS 270
Query: 224 VGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG 283
+ ++++ YAK G + AR +F+ + E+D V+ AIISGY GL +EA+ LF ++ G
Sbjct: 271 LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 284 -----------MQSNY--------------------VTYASVLTALSGLASLDHGKQVHN 312
MQ+N+ VT +S+L +L+ ++L GK++H
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
+R+ + + + S+ID Y+K G L ++R+FD ++R++++W A++ Y HG+
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDS 450
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
LF M+ KPD VT+ AVLS +H G D IF M + K +EP EHY C
Sbjct: 451 ACSLFDQMQCLG-TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLT-KYDIEPGVEHYAC 508
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
+V +L RAG++ +A EFI KMP +P A +WG+LL SV +++I F RL E+E N
Sbjct: 509 MVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPEN 568
Query: 493 AGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRR 543
GNY ++ + +R+ M + + K PG S IE ++ L +F A D S R
Sbjct: 569 TGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERS 628
Query: 544 EEVYIKVKELSVRFKEAGYV 563
+E+Y ++ L + Y+
Sbjct: 629 KEMYEIIEGLVESMSDKEYI 648
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/284 (32%), Positives = 152/284 (53%), Gaps = 18/284 (6%)
Query: 115 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRG 174
++HA ++ P FL ++LI YT+ D R A HVFDE+ RN S+ A++ AY+ R
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 175 YASQALNLFVQMLRS------GTEPNEFTFATVXSML-----------GRQIHSLIIKSN 217
A +LF+ + S P+ + + V L RQ+H +I+
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 218 YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFR 277
+D+ V+VG+ ++ Y K I AR +F+ + ERDVVS ++ISGY+Q G E+ +++
Sbjct: 163 FDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYK 222
Query: 278 -QLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKC 336
L + N VT SV A + L G +VH ++ + + + L N++I Y+KC
Sbjct: 223 AMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKC 282
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLM 380
G+L Y+R +FD M E+ +++ A++ GY HG +E + LF+ M
Sbjct: 283 GSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 142/299 (47%), Gaps = 18/299 (6%)
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
Q+H+ I+ + ++ S L+ Y + + +A +F+ + R+ S A++ Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 268 LDEEALDLFRQLRG------EGMQSNYVTYASVLTALSG-----LASLDHGKQVHNHVLR 316
+ +A LF G + + + ++ + VL ALSG L SL +QVH V+R
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSL--ARQVHGFVIR 160
Query: 317 SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLEL 376
S V + N +I Y+KC N+ +R++FD M ER V+SWN+M+ GY + G + ++
Sbjct: 161 GGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKM 220
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
+ M ++ KP+GVT+++V C GL++ M I ++ + V+
Sbjct: 221 YKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCN--AVIGF 278
Query: 437 LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVD--IGVFVGHRLLEIETGNA 493
+ G ++ A +M E + +G+++ H V + +F + + T NA
Sbjct: 279 YAKCGSLDYARALFDEMS-EKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNA 336
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 105/226 (46%), Gaps = 14/226 (6%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M CG ++LL L+ G+ +HA I+ ++++ T +I Y K
Sbjct: 356 EMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLG 415
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
L A+ VFD +R++++WTA+I+AY+ G + A +LF QM GT+P++ T V S
Sbjct: 416 FLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLS 475
Query: 204 MLGRQ---------IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVV 254
S++ K + + V + ++ + ++ GK+ +A +P +
Sbjct: 476 AFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIA 535
Query: 255 SC-TAIISGYAQLG---LDEEALDLFRQLRGEGMQSNYVTYASVLT 296
A+++G + LG + A D ++ E NY A++ T
Sbjct: 536 KVWGALLNGASVLGDLEIARFACDRLFEMEPEN-TGNYTIMANLYT 580
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/500 (32%), Positives = 272/500 (54%), Gaps = 32/500 (6%)
Query: 89 GHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDA 148
G ++ + +++ C + L+ +++H IK Y + + L+ Y+KC L
Sbjct: 271 GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAV 330
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--- 205
+ VF +M ERNVVSWT MIS+ A+++F+ M G PNE TF + + +
Sbjct: 331 KSVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCN 385
Query: 206 -----GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
G +IH L IK+ + + VG+S + +YAK + +A+ FE + R+++S A+I
Sbjct: 386 EQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMI 445
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLA--SLDHGKQVHNHVLRSE 318
SG+AQ G EAL +F E M + Y T+ SVL A++ S+ G++ H H+L+
Sbjct: 446 SGFAQNGFSHEALKMFLSAAAETMPNEY-TFGSVLNAIAFAEDISVKQGQRCHAHLLKLG 504
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT 378
+ S V+ ++L+DMY+K GN+ S ++F+ M ++ W +++ Y HG+ V+ LF
Sbjct: 505 LNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFH 564
Query: 379 LMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLG 438
M +EN V PD VT L+VL+ C+ G+ D+G +IF +M +EP EHY C+VD+LG
Sbjct: 565 KMIKEN-VAPDLVTFLSVLTACNRKGMVDKGYEIF-NMMIEVYNLEPSHEHYSCMVDMLG 622
Query: 439 RAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFF 498
RAGR++EA E + ++P P ++ S+LG+C +H NV +G V +E++ +G+Y
Sbjct: 623 RAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQ 682
Query: 499 LSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQ-----VLHTFHASDRSHPRRE 544
+ +R M KK V KE G S I++ + F + D+SHP+ +
Sbjct: 683 MYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSD 742
Query: 545 EVYIKVKELSVRFKEAGYVP 564
E+Y V+ + + G V
Sbjct: 743 EIYRMVEIIGLEMNLEGKVA 762
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 163/322 (50%), Gaps = 22/322 (6%)
Query: 104 CVSKRA----LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
C++ +A L+ G ++H + + V + ++ +Y K +A +F+ + + +
Sbjct: 82 CLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHS 211
VVSW ++S + ALN V+M +G + FT++T S +LG Q+ S
Sbjct: 142 VVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG-LDE 270
++K+ ++ + VG+S + MY++ G AR +F+ + +D++S +++SG +Q G
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGF 258
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
EA+ +FR + EG++ ++V++ SV+T L +Q+H ++ S + + N L+
Sbjct: 259 EAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILM 318
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
YSKCG L + +F M ER V+SW M+ + + +F MR + V P+
Sbjct: 319 SRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDG-VYPNE 372
Query: 391 VTMLAVLSGCSHGGLEDRGLDI 412
VT + +++ GL I
Sbjct: 373 VTFVGLINAVKCNEQIKEGLKI 394
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/502 (33%), Positives = 261/502 (51%), Gaps = 35/502 (6%)
Query: 92 MKFKG-------YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 144
MKF G YN + C + G+ VH+ + K V + LI++Y KC
Sbjct: 123 MKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQ 182
Query: 145 LRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM 204
+ AR +FDE+ ER+ VSW +MIS YS+ GYA A++LF +M G EP+E T ++
Sbjct: 183 VGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGA 242
Query: 205 --------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSC 256
GR + + I ++GS L+ MY K G + AR +F + ++D V+
Sbjct: 243 CSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAW 302
Query: 257 TAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR 316
TA+I+ Y+Q G EA LF ++ G+ + T ++VL+A + +L+ GKQ+ H
Sbjct: 303 TAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASE 362
Query: 317 SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLEL 376
+ + + L+DMY KCG + + R+F+ M + +WNAM+ Y G +E L L
Sbjct: 363 LSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLL 422
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
F M V P +T + VLS C H GL +G F++M+S G+ PK EHY ++DL
Sbjct: 423 FDRM----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSS-MFGLVPKIEHYTNIIDL 477
Query: 437 LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEI-ETGNAGN 495
L RAG ++EA+EF+++ P +P + ++LGAC +V I L+E+ E NAGN
Sbjct: 478 LSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGN 537
Query: 496 YFFLS---XDVR------SLRDMMLKKAVMKEPGRSRIELDQVLHTFHA-SDRSHPRREE 545
Y S D++ +R +M + V+K PG S IE++ L F A SD RE+
Sbjct: 538 YVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGRED 597
Query: 546 ----VYIKVKELSVRFKEAGYV 563
+ V+E+ E GY+
Sbjct: 598 SGSLFDLLVEEMKRERYEFGYI 619
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 196/378 (51%), Gaps = 20/378 (5%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
LL +C+S LR+ + A M+ L SV LI + + +F E N
Sbjct: 43 LLKKCISVNQLRQ---IQAQML----LHSVEKPNFLIPKAVELGDFNYSSFLFSVTEEPN 95
Query: 160 VVSWTAMISAYSQRGYASQA-LNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIH 210
S+ MI + +A L+L+ +M SG +P++FT+ V +GR +H
Sbjct: 96 HYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVH 155
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
S + K + V++ SL+ MYAK G++ AR +F+ + ERD VS ++ISGY++ G +
Sbjct: 156 SSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAK 215
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
+A+DLFR++ EG + + T S+L A S L L G+ + + ++ L + LI
Sbjct: 216 DAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLI 275
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
MY KCG+L +RR+F+ M ++ ++W AM+ Y ++G+ E +LF M E+ V PD
Sbjct: 276 SMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM-EKTGVSPDA 334
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
T+ VLS C G + G I + + ++ ++ +VD+ G+ GRVEEA
Sbjct: 335 GTLSTVLSACGSVGALELGKQI--ETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVF 392
Query: 451 KKMPFEPTAAIWGSLLGA 468
+ MP + A W +++ A
Sbjct: 393 EAMPVK-NEATWNAMITA 409
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/521 (32%), Positives = 261/521 (50%), Gaps = 56/521 (10%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y ++L C + G+ VH + + Y S+++ LI +Y + ++ AR +FD M
Sbjct: 147 YPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMF 206
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS------------- 203
ER+ VSW A+I+ Y+ G S+A LF +M SG E + T+ +
Sbjct: 207 ERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALG 266
Query: 204 ------------------------------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYA 233
LG++IH L I S+YD V ++L+ MY+
Sbjct: 267 LISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYS 326
Query: 234 KDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYAS 293
K + A +F E + + +IISGYAQL EEA L R++ G Q N +T AS
Sbjct: 327 KCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLAS 386
Query: 294 VLTALSGLASLDHGKQVHNHVLRSEV-PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER 352
+L + +A+L HGK+ H ++LR + Y +L NSL+D+Y+K G + ++++ D M +R
Sbjct: 387 ILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR 446
Query: 353 TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
+++ +++ GYG GEG L LF M +KPD VT++AVLS CSH L G +
Sbjct: 447 DEVTYTSLIDGYGNQGEGGVALALFKEMTRSG-IKPDHVTVVAVLSACSHSKLVHEGERL 505
Query: 413 FYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
F M + G+ P +H+ C+VDL GRAG + +A + I MP++P+ A W +LL AC +H
Sbjct: 506 FMKMQC-EYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIH 564
Query: 473 SNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSR 523
N IG + +LLE++ N G Y ++ + +R +M V K+PG +
Sbjct: 565 GNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAW 624
Query: 524 IELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE-AGYV 563
I+ D F D S P Y + L+ K+ AGY
Sbjct: 625 IDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGYA 665
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 166/354 (46%), Gaps = 44/354 (12%)
Query: 91 DMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARH 150
D+ +LL+ CV RA G +VHAH I + L +L+ Y+ + +A+
Sbjct: 40 DLVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQS 99
Query: 151 VFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM------ 204
+ + + + W +I++Y++ + + + +M+ G P+ FT+ +V
Sbjct: 100 IIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLD 159
Query: 205 --LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 262
GR +H I S+Y + +YV ++L+ MY + + AR +F+ + ERD VS A+I+
Sbjct: 160 VAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINC 219
Query: 263 YAQLGLDEEALDLFRQLRGEGMQSNYVTYASV---------------------------- 294
YA G+ EA +LF ++ G++ + +T+ +
Sbjct: 220 YASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLD 279
Query: 295 -------LTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
L A S + ++ GK++H + S ++N+LI MYSKC +L ++ +F
Sbjct: 280 PVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFR 339
Query: 348 TMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+E ++ +WN+++ GY + + E L M +P+ +T+ ++L C+
Sbjct: 340 QTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAG-FQPNSITLASILPLCA 392
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 104/222 (46%), Gaps = 1/222 (0%)
Query: 204 MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
+ G Q+H+ I S + H + L+ Y+ +EA+ I E + +I+ Y
Sbjct: 60 LAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASY 119
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
A+ L EE + ++++ +G++ + TY SVL A + G+ VH + S S +
Sbjct: 120 AKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSL 179
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+ N+LI MY + N+ +RR+FD M ER +SWNA++ Y G E ELF M
Sbjct: 180 YVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFS 239
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEP 425
V+ +T + GC G L + M + ++P
Sbjct: 240 G-VEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP 280
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 82/223 (36%), Gaps = 38/223 (17%)
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE 351
AS+L+A + + G QVH H + S V + VL L+ YS ++ I +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 352 RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS---------- 401
+ WN ++ Y K+ EV+ + M + ++PD T +VL C
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKG-IRPDAFTYPSVLKACGETLDVAFGRV 165
Query: 402 -HGGLEDRGLDIFYDMTSGKIGV------------------EPKKEHYGCVVDLLGRAGR 442
HG +E + + I + E + V++ G
Sbjct: 166 VHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGM 225
Query: 443 VEEAFEFIKKMPF---EPTAAIWGSLLGACSVHSNVDIGVFVG 482
EAFE KM F E + W + G C + G +VG
Sbjct: 226 WSEAFELFDKMWFSGVEVSVITWNIISGGC-----LQTGNYVG 263
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/484 (33%), Positives = 261/484 (53%), Gaps = 29/484 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ L C + +G ++H+ + + + +++ T ++ +Y K + AR+ FDEMP
Sbjct: 81 FTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMP 140
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKS 216
R+ VSWTA+IS Y + G A LF QM P+ +M+ + S + S
Sbjct: 141 HRSEVSWTALISGYIRCGELDLASKLFDQM------PHVKDVVIYNAMMDGFVKSGDMTS 194
Query: 217 N---YD----AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
+D V ++++ Y I AR +F+ +PER++VS +I GY Q
Sbjct: 195 ARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQP 254
Query: 270 EEALDLFRQLRGE-GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+E + LF++++ + + VT SVL A+S +L G+ H V R ++ V + +
Sbjct: 255 QEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTA 314
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF-TLMREENEVK 387
++DMYSKCG + ++RIFD M E+ V SWNAM+ GY +G R L+LF T+M EE K
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE---K 371
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
PD +TMLAV++ C+HGGL + G F+ M ++G+ K EHYGC+VDLLGRAG ++EA
Sbjct: 372 PDEITMLAVITACNHGGLVEEGRKWFHVMR--EMGLNAKIEHYGCMVDLLGRAGSLKEAE 429
Query: 448 EFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------ 501
+ I MPFEP I S L AC + +++ + + +E+E N GNY L
Sbjct: 430 DLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADK 489
Query: 502 ---DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFK 558
D ++++M K KE G S IE++ ++ F + D +HP R +++ + +L +
Sbjct: 490 RWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMN 549
Query: 559 EAGY 562
E Y
Sbjct: 550 EEKY 553
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 184/368 (50%), Gaps = 26/368 (7%)
Query: 119 HMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWT-AMISAYSQRGYAS 177
H I+T +V + T+ +V+ + AR +FD+ P+R+ + +MI AY +
Sbjct: 4 HAIET----NVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYP 59
Query: 178 QALNLFVQMLRSGT--EPNEFTFATVX-----SML---GRQIHSLIIKSNYDAHVYVGSS 227
+ L+ + LR T P+ FTF T+ SM G Q+HS I + + A +YV +
Sbjct: 60 DSFALY-RDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTG 118
Query: 228 LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSN 287
++DMYAK GK+ AR F+ +P R VS TA+ISGY + G + A LF Q+ +
Sbjct: 119 VVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM---PHVKD 175
Query: 288 YVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
V Y +++ + +++ + + V ++ ++I Y ++ +R++FD
Sbjct: 176 VVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWT----TMIHGYCNIKDIDAARKLFD 231
Query: 348 TMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLED 407
M ER ++SWN M+ GY ++ + +E + LF M+ + PD VT+L+VL S G
Sbjct: 232 AMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALS 291
Query: 408 RGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 467
G + K+ + K + ++D+ + G +E+A +MP E A W +++
Sbjct: 292 LGEWCHCFVQRKKL--DKKVKVCTAILDMYSKCGEIEKAKRIFDEMP-EKQVASWNAMIH 348
Query: 468 ACSVHSNV 475
+++ N
Sbjct: 349 GYALNGNA 356
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 114/258 (44%), Gaps = 13/258 (5%)
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERD-VVSCTAIISGYAQLGLDEE 271
+++ + +V + + L + A I AR +F+ P+RD ++I Y + +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 272 ALDLFRQLRGEG-MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
+ L+R LR E + T+ ++ + S + G Q+H+ + R + + + ++
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
DMY+K G + +R FD M R+ +SW A++ GY + GE +LF M +V
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDV---- 176
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
V A++ G G +F +MT + H C + + A ++ +A
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDA---- 232
Query: 451 KKMPFEPTAAIWGSLLGA 468
MP E W +++G
Sbjct: 233 --MP-ERNLVSWNTMIGG 247
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 156/490 (31%), Positives = 263/490 (53%), Gaps = 51/490 (10%)
Query: 108 RALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMI 167
++ E ++++A +I S F+ T+++ K + + A +F+++ NV + ++I
Sbjct: 21 KSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSII 80
Query: 168 SAYSQRGYASQALNLFVQMLRSGTE-PNEFTF-------ATVXS-MLGRQIHSLIIKSNY 218
AY+ + ++ Q+LR E P+ FTF A++ S LG+Q+H + K
Sbjct: 81 RAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGP 140
Query: 219 DAHVYVGSSLLDMY-------------------------------AKDGKIHEARGIFEC 247
HV ++L+DMY A+ G++ +A+G+F
Sbjct: 141 RFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHL 200
Query: 248 LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG 307
+ ++ +VS TA+ISGY +G EA+D FR+++ G++ + ++ SVL + + L SL+ G
Sbjct: 201 MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELG 260
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKH 367
K +H + R + N+LI+MYSKCG ++ + ++F M+ + V+SW+ M+ GY H
Sbjct: 261 KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYH 320
Query: 368 GEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKK 427
G +E F M+ +VKP+G+T L +LS CSH G+ GL ++DM +EPK
Sbjct: 321 GNAHGAIETFNEMQRA-KVKPNGITFLGLLSACSHVGMWQEGLR-YFDMMRQDYQIEPKI 378
Query: 428 EHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
EHYGC++D+L RAG++E A E K MP +P + IWGSLL +C N+D+ + L+E
Sbjct: 379 EHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE 438
Query: 488 IETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDR 538
+E + GNY L+ DV LR M+ + + K PG S IE++ ++ F + D
Sbjct: 439 LEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDN 498
Query: 539 SHPRREEVYI 548
S P E+ I
Sbjct: 499 SKPFWTEISI 508
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 134/290 (46%), Gaps = 40/290 (13%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+ C S + G++VH H+ K V LI +Y K D L DA VFDEM ER+
Sbjct: 115 MFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERD 174
Query: 160 V-------------------------------VSWTAMISAYSQRGYASQALNLFVQMLR 188
V VSWTAMIS Y+ G +A++ F +M
Sbjct: 175 VISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQL 234
Query: 189 SGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE 240
+G EP+E + +V LG+ IH + + V ++L++MY+K G I +
Sbjct: 235 AGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQ 294
Query: 241 ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSG 300
A +F + +DV+S + +ISGYA G A++ F +++ ++ N +T+ +L+A S
Sbjct: 295 AIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSH 354
Query: 301 LASLDHGKQVHNHVLRS-EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM 349
+ G + + + + ++ + LID+ ++ G L + I TM
Sbjct: 355 VGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 404
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 130/288 (45%), Gaps = 22/288 (7%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L C +L G+ +H + + +L + LI +Y+KC + A +F +M +
Sbjct: 246 SVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGK 305
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM---LGRQIHSL--- 212
+V+SW+ MIS Y+ G A A+ F +M R+ +PN TF + S +G L
Sbjct: 306 DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYF 365
Query: 213 -IIKSNYDAHVYVG--SSLLDMYAKDGKIHEARGIFECLPER-DVVSCTAIISGY---AQ 265
+++ +Y + L+D+ A+ GK+ A I + +P + D +++S
Sbjct: 366 DMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGN 425
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH-GKQVHNHVLRSEVPSYVV 324
L + A+D +L E M NYV A++ L + K + N ++ ++
Sbjct: 426 LDVALVAMDHLVELEPEDM-GNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLI 484
Query: 325 LQNSLIDMYSKCGN-------LTYSRRIFDTMQERTVMSWNAMLVGYG 365
N+++ + N ++ ++F + Q++ V++ N L G
Sbjct: 485 EVNNIVQEFVSGDNSKPFWTEISIVLQLFTSHQDQDVITNNNALAFIG 532
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 272 bits (696), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/462 (33%), Positives = 261/462 (56%), Gaps = 23/462 (4%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP-ERNVVSWTAMISAYSQ 172
++VHA ++K + + +I Y C S+ DA+ VFD + ++++SW +MI+ +S+
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAHVYV 224
A LF+QM R E + +T+ + S + G+ +H ++IK +
Sbjct: 283 HELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSA 342
Query: 225 GSSLLDMYAK--DGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE 282
++L+ MY + G + +A +FE L +D++S +II+G+AQ GL E+A+ F LR
Sbjct: 343 TNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSS 402
Query: 283 GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYS 342
++ + ++++L + S LA+L G+Q+H +S S + +SLI MYSKCG + +
Sbjct: 403 EIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESA 462
Query: 343 RRIFDTMQER-TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
R+ F + + + ++WNAM++GY +HG G+ L+LF+ M +N VK D VT A+L+ CS
Sbjct: 463 RKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQN-VKLDHVTFTAILTACS 521
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAI 461
H GL GL++ ++ ++P+ EHY VDLLGRAG V +A E I+ MP P +
Sbjct: 522 HTGLIQEGLELL-NLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMV 580
Query: 462 WGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---XDVR------SLRDMMLK 512
+ LG C +++ V + LLEIE + Y LS D++ S++ MM +
Sbjct: 581 LKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKE 640
Query: 513 KAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELS 554
+ V K PG S IE+ + F+A DRS+P +++Y+ +K+L+
Sbjct: 641 RGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLT 682
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 106/329 (32%), Positives = 175/329 (53%), Gaps = 22/329 (6%)
Query: 116 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGY 175
H + IK + +++ R++ Y K L A +FDEMP+R+ VSW MIS Y+ G
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 176 ASQALNLFVQMLRSGTEPNEFTF-------ATVXSM-LGRQIHSLIIKSNYDAHVYVGSS 227
A LF M RSG++ + ++F A+V LG Q+H L+IK Y+ +VYVGSS
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSS 141
Query: 228 LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE-GMQS 286
L+DMYAK ++ +A F+ + E + VS A+I+G+ Q+ + A L + + +
Sbjct: 142 LVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTM 201
Query: 287 NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
+ T+A +LT L + KQVH VL+ + + + N++I Y+ CG+++ ++R+F
Sbjct: 202 DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVF 261
Query: 347 DTM-QERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS---- 401
D + + ++SWN+M+ G+ KH ELF M + + V+ D T +LS CS
Sbjct: 262 DGLGGSKDLISWNSMIAGFSKHELKESAFELFIQM-QRHWVETDIYTYTGLLSACSGEEH 320
Query: 402 -------HGGLEDRGLDIFYDMTSGKIGV 423
HG + +GL+ T+ I +
Sbjct: 321 QIFGKSLHGMVIKKGLEQVTSATNALISM 349
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 199/394 (50%), Gaps = 15/394 (3%)
Query: 85 MALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 144
M G D+ ++ LL S + G++VH +IK Y +V++ + L+ +Y KC+
Sbjct: 92 MKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCER 151
Query: 145 LRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM-LRSGTEPNEFTFATVXS 203
+ DA F E+ E N VSW A+I+ + Q A L M +++ + TFA + +
Sbjct: 152 VEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLT 211
Query: 204 MLG--------RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL-PERDVV 254
+L +Q+H+ ++K + + ++++ YA G + +A+ +F+ L +D++
Sbjct: 212 LLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLI 271
Query: 255 SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV 314
S ++I+G+++ L E A +LF Q++ ++++ TY +L+A SG GK +H V
Sbjct: 272 SWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMV 331
Query: 315 LRSEVPSYVVLQNSLIDMYSK--CGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
++ + N+LI MY + G + + +F++++ + ++SWN+++ G+ + G +
Sbjct: 332 IKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSED 391
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
++ F+ +R +E+K D A+L CS G I T K G +
Sbjct: 392 AVKFFSYLR-SSEIKVDDYAFSALLRSCSDLATLQLGQQIHALAT--KSGFVSNEFVISS 448
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
++ + + G +E A + +++ + + W +++
Sbjct: 449 LIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 310 VHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE 369
H + ++ S + + N ++D Y K G L Y+ +FD M +R +SWN M+ GY G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEH 429
+ LFT M+ DG + +L G + D G + + G G E
Sbjct: 82 LEDAWCLFTCMKRSGS-DVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKG--GYECNVYV 138
Query: 430 YGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
+VD+ + RVE+AFE K++ EP + W +L+
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAG 176
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 160/440 (36%), Positives = 248/440 (56%), Gaps = 30/440 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYL-PSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
+ +LL C S RA+ G RVH H+I L ++ + ++L+ LY C A VFD M
Sbjct: 95 FASLLETCYSLRAIDHGVRVH-HLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 156 PERNV--VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------ML 205
+R+ +W ++IS Y++ G A+ L+ QM G +P+ FTF V +
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
G IH ++K + VYV ++L+ MYAK G I +AR +F+ +P +D VS ++++GY
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
GL EALD+FR + G++ + V +SVL + + S HG+Q+H V+R + + +
Sbjct: 274 HGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSV 330
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
N+LI +YSK G L + IFD M ER +SWNA++ + K+ G L+ F M N
Sbjct: 331 ANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRAN- 386
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
KPDG+T ++VLS C++ G+ + G +F + S + G++PK EHY C+V+L GRAG +EE
Sbjct: 387 AKPDGITFVSVLSLCANTGMVEDGERLF-SLMSKEYGIDPKMEHYACMVNLYGRAGMMEE 445
Query: 446 AFEFI-KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFL----- 499
A+ I ++M E +WG+LL AC +H N DIG RL E+E N N+ L
Sbjct: 446 AYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYS 505
Query: 500 ----SXDVRSLRDMMLKKAV 515
+ DV +R MM+ + +
Sbjct: 506 KAKRAEDVERVRQMMVDRGL 525
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 159/469 (33%), Positives = 244/469 (52%), Gaps = 20/469 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ + L C S G ++H IK+ + L +Y +C L AR VFD++
Sbjct: 273 FGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE 332
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
+ SW +I+ + GYA +A+++F QM SG P+ + ++ G Q
Sbjct: 333 RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQ 392
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER-DVVSCTAIISGYAQLG 267
IHS IIK + A + V +SLL MY ++ +FE D VS I++ Q
Sbjct: 393 IHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHE 452
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
E L LF+ + + +++T ++L ++SL G QVH + L++ + ++N
Sbjct: 453 QPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKN 512
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
LIDMY+KCG+L +RRIFD+M R V+SW+ ++VGY + G G E L LF M+ ++
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAG-IE 571
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
P+ VT + VL+ CSH GL + GL ++ M + + G+ P KEH CVVDLL RAGR+ EA
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQT-EHGISPTKEHCSCVVDLLARAGRLNEAE 630
Query: 448 EFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------ 501
FI +M EP +W +LL AC NV + +L+I+ N+ + L
Sbjct: 631 RFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSG 690
Query: 502 ---DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVY 547
+ LR M K V K PG+S IE++ +H F A D HP R+++Y
Sbjct: 691 NWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIY 739
Score = 215 bits (548), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 193/330 (58%), Gaps = 10/330 (3%)
Query: 92 MKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHV 151
++ + Y +L+ C S R+L +G+++H H++ + L ++ +Y KC SLRDAR V
Sbjct: 65 IRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREV 124
Query: 152 FDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM------- 204
FD MPERN+VS+T++I+ YSQ G ++A+ L+++ML+ P++F F ++
Sbjct: 125 FDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
Query: 205 -LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
LG+Q+H+ +IK +H+ ++L+ MY + ++ +A +F +P +D++S ++II+G+
Sbjct: 185 GLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF 244
Query: 264 AQLGLDEEALDLFRQLRGEGM-QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY 322
+QLG + EAL +++ G+ N + S L A S L D+G Q+H ++SE+
Sbjct: 245 SQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGN 304
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
+ SL DMY++CG L +RR+FD ++ SWN ++ G +G E + +F+ MR
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS 364
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
+ PD +++ ++L + +G+ I
Sbjct: 365 SGFI-PDAISLRSLLCAQTKPMALSQGMQI 393
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 15/282 (5%)
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
GR+IH I+ SN + + +L MY K G + +AR +F+ +PER++VS T++I+GY+Q
Sbjct: 86 GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQ 145
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
G EA+ L+ ++ E + + + S++ A + + + GKQ+H V++ E S+++
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
QN+LI MY + ++ + R+F + + ++SW++++ G+ + G E L M
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 386 VKPDGVTMLAVLSGCSH-----GGLEDRGLDIFYDMTSGKIGVEPKKEHYGC-VVDLLGR 439
P+ + L CS G + GL I ++ I GC + D+ R
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA--------GCSLCDMYAR 317
Query: 440 AGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFV 481
G + A ++ P A W ++ + + D V V
Sbjct: 318 CGFLNSARRVFDQIE-RPDTASWNVIIAGLANNGYADEAVSV 358
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 139/369 (37%), Positives = 215/369 (58%), Gaps = 11/369 (2%)
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
G++IH+ + + + Y+ LL +YA G + A +F L RD++ A+ISGY Q
Sbjct: 127 GKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQ 186
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
GL++E L ++ +R + + T+ASV A S L L+HGK+ H +++ + S +++
Sbjct: 187 KGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIV 246
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
++L+DMY KC + + R+FD + R V++W +++ GYG HG+ EVL+ F M+EE
Sbjct: 247 DSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEG- 305
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
+P+ VT L VL+ C+HGGL D+G + FY M G+EP+ +HY +VD LGRAGR++E
Sbjct: 306 CRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKR-DYGIEPEGQHYAAMVDTLGRAGRLQE 364
Query: 446 AFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDVRS 505
A+EF+ K P + +WGSLLGAC +H NV + + LE++ N GNY + S
Sbjct: 365 AYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYAS 424
Query: 506 ---------LRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVR 556
+R M V K+PG S+IEL +H F D SH E++Y KV E++
Sbjct: 425 CGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSF 484
Query: 557 FKEAGYVPD 565
F + Y PD
Sbjct: 485 FMDIDYYPD 493
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 121/219 (55%), Gaps = 8/219 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y LL EC ++ +G+R+HA M + + +L+ +L++LY L+ A +F +
Sbjct: 111 YAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLK 170
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQ 208
R+++ W AMIS Y Q+G + L ++ M ++ P+++TFA+V G++
Sbjct: 171 IRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKR 230
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
H+++IK +++ V S+L+DMY K + +F+ L R+V++ T++ISGY G
Sbjct: 231 AHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGK 290
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG 307
E L F +++ EG + N VT+ VLTA + +D G
Sbjct: 291 VSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG 329
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 164/538 (30%), Positives = 272/538 (50%), Gaps = 58/538 (10%)
Query: 78 LQQPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIV 137
L + +L+ C Y L C R G + H++K R + I
Sbjct: 140 LYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIH 199
Query: 138 LYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT 197
++ C + +AR VFDE P R++VSW +I+ Y + G A +A+ ++ M G +P++ T
Sbjct: 200 MFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259
Query: 198 ---FATVXSMLG-----RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
+ SMLG ++ + + ++ + + ++L+DM++K G IHEAR IF+ L
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLE 319
Query: 250 ERDVVSCTAIISGYAQLGL-------------------------------DEEALDLFRQ 278
+R +VS T +ISGYA+ GL ++AL LF++
Sbjct: 320 KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQE 379
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
++ + + +T L+A S L +LD G +H ++ + + V L SL+DMY+KCGN
Sbjct: 380 MQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGN 439
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLS 398
++ + +F +Q R +++ A++ G HG+ + F M + + PD +T + +LS
Sbjct: 440 ISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAG-IAPDEITFIGLLS 498
Query: 399 GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPT 458
C HGG+ G D F M S + + P+ +HY +VDLLGRAG +EEA ++ MP E
Sbjct: 499 ACCHGGMIQTGRDYFSQMKS-RFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEAD 557
Query: 459 AAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDM 509
AA+WG+LL C +H NV++G +LLE++ ++G Y L D + R M
Sbjct: 558 AAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRM 617
Query: 510 MLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKV--------KELSVRFKE 559
M ++ V K PG S IE++ ++ F D+S P E++Y ++ LSV F E
Sbjct: 618 MNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGRHMRSSLSVLFSE 675
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/432 (25%), Positives = 205/432 (47%), Gaps = 52/432 (12%)
Query: 94 FKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS--LRDARHV 151
F +N LL+ + L +++ A MI + F +RLI +S L + +
Sbjct: 50 FVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKI 109
Query: 152 FDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG---TEPNEFTFATV------- 201
+ N+ SW I +S+ ++ L+ QMLR G + P+ FT+ +
Sbjct: 110 LKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADL 169
Query: 202 -XSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
S LG I ++K + +V ++ + M+A G + AR +F+ P RD+VS +I
Sbjct: 170 RLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLI 229
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP 320
+GY ++G E+A+ +++ + EG++ + VT ++++ S L L+ GK+ + +V + +
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHG------------ 368
+ L N+L+DM+SKCG++ +RRIFD +++RT++SW M+ GY + G
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDM 349
Query: 369 -------------------EGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRG 409
G++ L LF M+ N KPD +TM+ LS CS G D G
Sbjct: 350 EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN-TKPDEITMIHCLSACSQLGALDVG 408
Query: 410 LDI--FYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 467
+ I + + S + V +VD+ + G + EA + + + +++G
Sbjct: 409 IWIHRYIEKYSLSLNVALGTS----LVDMYAKCGNISEALSVFHGIQTR-NSLTYTAIIG 463
Query: 468 ACSVHSNVDIGV 479
++H + +
Sbjct: 464 GLALHGDASTAI 475
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 271 bits (692), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/466 (34%), Positives = 264/466 (56%), Gaps = 20/466 (4%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
L G +HA++IK + ++ + LI +Y+KC+ F M +++++SWT +I+
Sbjct: 402 LLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAG 461
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATV-------XSML-GRQIHSLIIKSNYDAH 221
Y+Q +AL LF + + E +E ++ SML ++IH I++
Sbjct: 462 YAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT 521
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
V + + L+D+Y K + A +FE + +DVVS T++IS A G + EA++LFR++
Sbjct: 522 V-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVE 580
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
G+ ++ V +L+A + L++L+ G+++H ++LR + +++DMY+ CG+L
Sbjct: 581 TGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQS 640
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
++ +FD ++ + ++ + +M+ YG HG G+ +ELF MR EN V PD ++ LA+L CS
Sbjct: 641 AKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHEN-VSPDHISFLALLYACS 699
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAI 461
H GL D G F + + +EP EHY C+VD+LGRA V EAFEF+K M EPTA +
Sbjct: 700 HAGLLDEGRG-FLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEV 758
Query: 462 WGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMMLK 512
W +LL AC HS +IG RLLE+E N GN +S DV +R M
Sbjct: 759 WCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKA 818
Query: 513 KAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFK 558
+ K PG S IE+D +H F A D+SHP +E+Y K+ E++ + +
Sbjct: 819 SGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 177/335 (52%), Gaps = 16/335 (4%)
Query: 78 LQQPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSV---FLRTR 134
L + ++ + ++ + + +L C +RA+ +G+++H+ + KT PS FL +
Sbjct: 64 LTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKT--FPSFELDFLAGK 121
Query: 135 LIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPN 194
L+ +Y KC SL DA VFDEMP+R +W MI AY G + AL L+ M G
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 195 EFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE 246
+F + G ++HSL++K Y + ++ ++L+ MYAK+ + AR +F+
Sbjct: 182 LSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 247 CLPER-DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLD 305
E+ D V +I+S Y+ G E L+LFR++ G N T S LTA G +
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAK 301
Query: 306 HGKQVHNHVLRSEV-PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGY 364
GK++H VL+S S + + N+LI MY++CG + + RI M V++WN+++ GY
Sbjct: 302 LGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY 361
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG 399
++ +E LE F+ M K D V+M ++++
Sbjct: 362 VQNLMYKEALEFFSDMIAAGH-KSDEVSMTSIIAA 395
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 168/304 (55%), Gaps = 10/304 (3%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
M + G + + ALL C R +R G +H+ ++K Y + F+ L+ +Y K D
Sbjct: 172 NMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 231
Query: 144 SLRDARHVFDEMPER-NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX 202
L AR +FD E+ + V W +++S+YS G + + L LF +M +G PN +T +
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSAL 291
Query: 203 SM--------LGRQIHSLIIKSN-YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
+ LG++IH+ ++KS+ + + +YV ++L+ MY + GK+ +A I + DV
Sbjct: 292 TACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADV 351
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
V+ ++I GY Q + +EAL+ F + G +S+ V+ S++ A L++L G ++H +
Sbjct: 352 VTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAY 411
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREV 373
V++ S + + N+LIDMYSKC Y R F M ++ ++SW ++ GY ++ E
Sbjct: 412 VIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEA 471
Query: 374 LELF 377
LELF
Sbjct: 472 LELF 475
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 129/265 (48%), Gaps = 9/265 (3%)
Query: 206 GRQIHSLIIKSNYDAHV-YVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYA 264
GRQ+HS I K+ + ++ L+ MY K G + +A +F+ +P+R + +I Y
Sbjct: 99 GRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYV 158
Query: 265 QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
G AL L+ +R EG+ ++ ++L A + L + G ++H+ +++ S
Sbjct: 159 SNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGF 218
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQER-TVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+ N+L+ MY+K +L+ +RR+FD QE+ + WN++L Y G+ E LELF M
Sbjct: 219 IVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMT 278
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC--VVDLLGRAG 441
P+ T+++ L+ C G +I + E Y C ++ + R G
Sbjct: 279 GPA-PNSYTIVSALTACDGFSYAKLGKEIHASVLKSST---HSSELYVCNALIAMYTRCG 334
Query: 442 RVEEAFEFIKKMPFEPTAAIWGSLL 466
++ +A +++M W SL+
Sbjct: 335 KMPQAERILRQMN-NADVVTWNSLI 358
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 270 bits (690), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 161/467 (34%), Positives = 254/467 (54%), Gaps = 23/467 (4%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSV-FLRTRLIVLYTKCDSLRDARHVFDEMPE 157
++L+ C +REG+ VH ++ P+ L L+ LY +C L D V + +
Sbjct: 308 SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSD 367
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQI 209
RN+V+W ++IS Y+ RG QAL LF QM+ +P+ FT A+ S LG+QI
Sbjct: 368 RNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQI 427
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H +I+++ +V +SL+DMY+K G + A +F + R VV+ +++ G++Q G
Sbjct: 428 HGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNS 486
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
EA+ LF + ++ N VT+ +V+ A S + SL+ GK VH+ ++ S + + +L
Sbjct: 487 VEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD-LFTDTAL 545
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
IDMY+KCG+L + +F M R+++SW++M+ YG HG + F M E KP+
Sbjct: 546 IDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESG-TKPN 604
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF 449
V + VLS C H G + G F M S GV P EH+ C +DLL R+G ++EA+
Sbjct: 605 EVVFMNVLSACGHSGSVEEGKYYFNLMKS--FGVSPNSEHFACFIDLLSRSGDLKEAYRT 662
Query: 450 IKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX-------- 501
IK+MPF A++WGSL+ C +H +DI + + L +I T + G Y LS
Sbjct: 663 IKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEW 722
Query: 502 -DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVY 547
+ R LR M + K PG S IE+DQ + F A + + + +E+Y
Sbjct: 723 EEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIY 769
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 182/381 (47%), Gaps = 18/381 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKT-RYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
Y L C S LR ++HAH++ T R T+LI Y S +R VF+
Sbjct: 4 YMPLFRSCSS---LRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM---------LG 206
P + + +I A++L+ +++ T+ ++F F +V +G
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
++H IIK D + +SLL MY + G + +A +F+ +P RD+V+ + ++S +
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G +AL +F+ + +G++ + VT SV+ + L L + VH + R L
Sbjct: 181 GEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLC 240
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
NSL+ MYSKCG+L S RIF+ + ++ +SW AM+ Y + + L F+ M + +
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG-I 299
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG-CVVDLLGRAGRVEE 445
+P+ VT+ +VLS C GL G + ++ +P E +V+L G++ +
Sbjct: 300 EPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRREL--DPNYESLSLALVELYAECGKLSD 357
Query: 446 AFEFIKKMPFEPTAAIWGSLL 466
E + ++ + W SL+
Sbjct: 358 C-ETVLRVVSDRNIVAWNSLI 377
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 269 bits (688), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/449 (33%), Positives = 239/449 (53%), Gaps = 23/449 (5%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L C + L G+ VH + + R + ++ L+ +Y KC + +AR VFD M R
Sbjct: 223 SMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR 282
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIH 210
+V++WT MI+ Y++ G AL L M G PN T A++ S+ G + +H
Sbjct: 283 DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLH 342
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
++ + + + +SL+ MYAK ++ +F + +AII+G Q L
Sbjct: 343 GWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVS 402
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
+AL LF+++R E ++ N T S+L A + LA L +H ++ ++ S + L+
Sbjct: 403 DALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLV 462
Query: 331 DMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
+YSKCG L + +IF+ +QE+ V+ W A++ GYG HG+G L++F M V
Sbjct: 463 HVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSG-V 521
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
P+ +T + L+ CSH GL + GL +F M + HY C+VDLLGRAGR++EA
Sbjct: 522 TPNEITFTSALNACSHSGLVEEGLTLFRFMLE-HYKTLARSNHYTCIVDLLGRAGRLDEA 580
Query: 447 FEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS------ 500
+ I +PFEPT+ +WG+LL AC H NV +G ++L E+E N GNY L+
Sbjct: 581 YNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAAL 640
Query: 501 ---XDVRSLRDMMLKKAVMKEPGRSRIEL 526
D+ +R MM + K+PG S IE+
Sbjct: 641 GRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 171 bits (433), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/316 (31%), Positives = 174/316 (55%), Gaps = 12/316 (3%)
Query: 95 KGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
K Y +LLN + +++ + + +H H+I + L T L V Y C + AR +F+E
Sbjct: 16 KQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEE 74
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE--PNEFTFATVXSM-------- 204
MP+ +++S+ +I Y + G A+++F++M+ G + P+ +T+ V
Sbjct: 75 MPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMK 134
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYA 264
LG +H I++S + YV ++LL MY GK+ AR +F+ + RDV+S +ISGY
Sbjct: 135 LGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYY 194
Query: 265 QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
+ G +AL +F + E + ++ T S+L L L+ G+ VH V + +
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
++N+L++MY KCG + +R +FD M+ R V++W M+ GY + G+ LEL LM+ E
Sbjct: 255 VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEG 314
Query: 385 EVKPDGVTMLAVLSGC 400
V+P+ VT+ +++S C
Sbjct: 315 -VRPNAVTIASLVSVC 329
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 206/397 (51%), Gaps = 31/397 (7%)
Query: 108 RALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMI 167
++++ G VH ++++ + +++ L+ +Y + AR VFD M R+V+SW MI
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 168 SAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-----------GRQIHSLIIKS 216
S Y + GY + AL +F M+ E + AT+ SML GR +H L+ +
Sbjct: 191 SGYYRNGYMNDALMMFDWMV---NESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEK 247
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
+ V ++L++MY K G++ EAR +F+ + RDV++ T +I+GY + G E AL+L
Sbjct: 248 RLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELC 307
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKC 336
R ++ EG++ N VT AS+++ ++ GK +H +R +V S ++++ SLI MY+KC
Sbjct: 308 RLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKC 367
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
+ R+F + W+A++ G ++ + L LF MR E +V+P+ T+ ++
Sbjct: 368 KRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE-DVEPNIATLNSL 426
Query: 397 LSGCSHGGLED--RGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA---FEFIK 451
L ++ L D + ++I +T K G + +V + + G +E A F I+
Sbjct: 427 LP--AYAALADLRQAMNIHCYLT--KTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQ 482
Query: 452 KMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEI 488
+ +WG+L+ +H + GH L++
Sbjct: 483 EKHKSKDVVLWGALISGYGMHGD-------GHNALQV 512
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 117/249 (46%), Gaps = 24/249 (9%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
N+LL + LR+ +H ++ KT ++ S+ T L+ +Y+KC +L A +F+ + E
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQE 483
Query: 158 ----RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLI 213
++VV W A+IS Y G AL +F++M+RSG PNE TF S L HS +
Sbjct: 484 KHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFT---SALNACSHSGL 540
Query: 214 IKSNYDAHVYV------------GSSLLDMYAKDGKIHEARGIFECLP-ERDVVSCTAII 260
++ ++ + ++D+ + G++ EA + +P E A++
Sbjct: 541 VEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALL 600
Query: 261 SG---YAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
+ + + L E A + +L E NYV A++ AL ++ + + +V
Sbjct: 601 AACVTHENVQLGEMAANKLFELEPEN-TGNYVLLANIYAALGRWKDMEKVRSMMENVGLR 659
Query: 318 EVPSYVVLQ 326
+ P + ++
Sbjct: 660 KKPGHSTIE 668
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/409 (35%), Positives = 224/409 (54%), Gaps = 11/409 (2%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
+ CV L G +H +K ++ L+ +Y + ++ A+ VFDE+P RN
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSL 212
V W ++ Y + + LF M +G + T + +G+ +H +
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGV 235
Query: 213 IIKSNY-DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
I+ ++ D Y+ +S++DMY K + AR +FE +R+VV T +ISG+A+ E
Sbjct: 236 SIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVE 295
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
A DLFRQ+ E + N T A++L + S L SL HGK VH +++R+ + V S ID
Sbjct: 296 AFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFID 355
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
MY++CGN+ +R +FD M ER V+SW++M+ +G +G E L+ F M+ +N V P+ V
Sbjct: 356 MYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQN-VVPNSV 414
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
T +++LS CSH G G F MT GV P++EHY C+VDLLGRAG + EA FI
Sbjct: 415 TFVSLLSACSHSGNVKEGWKQFESMTR-DYGVVPEEEHYACMVDLLGRAGEIGEAKSFID 473
Query: 452 KMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS 500
MP +P A+ WG+LL AC +H VD+ + +LL +E + Y LS
Sbjct: 474 NMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLS 522
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 181/387 (46%), Gaps = 17/387 (4%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP-- 156
ALL + L Q+VHA +I + V L + L Y + + L A F+ +P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 157 ERNVVSWTAMISAYSQRGYA--SQALNLFVQMLR--SGTEPNEFTFATVXSM------LG 206
+RN SW ++S YS+ S L L+ +M R G + FA + G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
IH L +K+ D YV SL++MYA+ G + A+ +F+ +P R+ V ++ GY +
Sbjct: 129 ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKY 188
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN-HVLRSEVPSYVVL 325
D E LF +R G+ + +T ++ A + + GK VH + RS + L
Sbjct: 189 SKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYL 248
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
Q S+IDMY KC L +R++F+T +R V+ W ++ G+ K E +LF M E+
Sbjct: 249 QASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRES- 307
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
+ P+ T+ A+L CS G G + M + G+E ++ +D+ R G ++
Sbjct: 308 ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI--RNGIEMDAVNFTSFIDMYARCGNIQM 365
Query: 446 AFEFIKKMPFEPTAAIWGSLLGACSVH 472
A MP E W S++ A ++
Sbjct: 366 ARTVFDMMP-ERNVISWSSMINAFGIN 391
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 15/169 (8%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
A+L C S +LR G+ VH +MI+ T I +Y +C +++ AR VFD MPER
Sbjct: 317 AILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER 376
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNY 218
NV+SW++MI+A+ G +AL+ F +M PN TF S+L HS +K +
Sbjct: 377 NVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFV---SLLSACSHSGNVKEGW 433
Query: 219 DAHVYVG------------SSLLDMYAKDGKIHEARGIFECLPERDVVS 255
+ + ++D+ + G+I EA+ + +P + + S
Sbjct: 434 KQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMAS 482
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 267 bits (683), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/436 (34%), Positives = 241/436 (55%), Gaps = 19/436 (4%)
Query: 109 ALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
ALREG+ VH + + + + ++T ++ +Y K + AR VFD ++N V+W+AMI
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG----------RQIHSLIIKSNY 218
Y + +A +F QML + A ++G R +H +K+ +
Sbjct: 280 GYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGF 339
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQ 278
+ V ++++ YAK G + +A F + +DV+S ++I+G EE+ LF +
Sbjct: 340 ILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHE 399
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
+R G++ + T VLTA S LA+L HG H + + + N+L+DMY+KCG
Sbjct: 400 MRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGK 459
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLS 398
L ++R+FDTM +R ++SWN ML G+G HG G+E L LF M +E V PD VT+LA+LS
Sbjct: 460 LDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSM-QETGVNPDEVTLLAILS 518
Query: 399 GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPT 458
CSH GL D G +F M+ G V P+ +HY C+ DLL RAG ++EA++F+ KMPFEP
Sbjct: 519 ACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPD 578
Query: 459 AAIWGSLLGACSVHSNVDIGVFVGHRLLEI-ETGNA----GNYFFLS---XDVRSLRDMM 510
+ G+LL AC + N ++G V ++ + ET + N + + D +R +
Sbjct: 579 IRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLVLLSNTYSAAERWEDAARIRMIQ 638
Query: 511 LKKAVMKEPGRSRIEL 526
K+ ++K PG S +++
Sbjct: 639 KKRGLLKTPGYSWVDV 654
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 176/319 (55%), Gaps = 13/319 (4%)
Query: 99 ALLNECVSKRALREGQRVHAHMIK-TRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+LL C+ R L GQ +H H++K + L S + L LY C+ + ARHVFDE+P
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPH 63
Query: 158 R--NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GR 207
N ++W MI AY+ +A +AL+L+ +ML SG P ++T+ V G+
Sbjct: 64 PRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK 123
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
IHS + S++ +YV ++L+D YAK G++ A +F+ +P+RD+V+ A+ISG++
Sbjct: 124 LIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHC 183
Query: 268 LDEEALDLFRQLRG-EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
+ + LF +R +G+ N T + AL +L GK VH + R + +V++
Sbjct: 184 CLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK 243
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLEL-FTLMREENE 385
++D+Y+K + Y+RR+FD ++ ++W+AM+ GY ++ +E E+ F ++ +N
Sbjct: 244 TGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNV 303
Query: 386 VKPDGVTMLAVLSGCSHGG 404
V + +L GC+ G
Sbjct: 304 AMVTPVAIGLILMGCARFG 322
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 162/317 (51%), Gaps = 12/317 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +L C RA+ +G+ +H+H+ + + +++ T L+ Y KC L A VFDEMP
Sbjct: 106 YPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP 165
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLR-SGTEPNEFTFATVXSMLGR-------- 207
+R++V+W AMIS +S + + LF+ M R G PN T + LGR
Sbjct: 166 KRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
+H + + + V + +LD+YAK I AR +F+ +++ V+ +A+I GY +
Sbjct: 226 AVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENE 285
Query: 268 LDEEALDLFRQL--RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
+ +EA ++F Q+ V +L + L G+ VH + +++ + +
Sbjct: 286 MIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTV 345
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
QN++I Y+K G+L + R F + + V+S+N+++ G + E LF MR
Sbjct: 346 QNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG- 404
Query: 386 VKPDGVTMLAVLSGCSH 402
++PD T+L VL+ CSH
Sbjct: 405 IRPDITTLLGVLTACSH 421
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
+L C AL G H + + Y + + L+ +YTKC L A+ VFD M +R
Sbjct: 414 GVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKR 473
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIH 210
++VSW M+ + G +AL+LF M +G P+E T + S G+Q+
Sbjct: 474 DIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLF 533
Query: 211 SLIIKSNYDAHVYVG--SSLLDMYAKDGKIHEARGIFECLP-ERDV 253
+ + + +++ + + + D+ A+ G + EA +P E D+
Sbjct: 534 NSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDI 579
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 150/460 (32%), Positives = 245/460 (53%), Gaps = 24/460 (5%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN-VVSWTAMIS 168
L + ++VH K + ++ + L+ Y+K S+ DA+ VFDE+P+R+ V W A+++
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDA 220
YSQ AL +F +M G + T +V S GR IH L +K+ +
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGS 295
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
+ V ++L+DMY K + EA IFE + ERD+ + +++ + G + L LF ++
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 281 GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV----PSYVVLQNSLIDMYSKC 336
G++ + VT +VL LASL G+++H +++ S + S + NSL+DMY KC
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKC 415
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
G+L +R +FD+M+ + SWN M+ GYG G L++F+ M VKPD +T + +
Sbjct: 416 GDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAG-VKPDEITFVGL 474
Query: 397 LSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE 456
L CSH G + G + M + + P +HY CV+D+LGRA ++EEA+E P
Sbjct: 475 LQACSHSGFLNEGRNFLAQMET-VYNILPTSDHYACVIDMLGRADKLEEAYELAISKPIC 533
Query: 457 PTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLR 507
+W S+L +C +H N D+ + G RL E+E + G Y +S +V +R
Sbjct: 534 DNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVR 593
Query: 508 DMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVY 547
D M ++ V K PG S I L +HTF +++HP + ++
Sbjct: 594 DAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 199/386 (51%), Gaps = 14/386 (3%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLP-SVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
A L C ++ GQ++H M++ +L S T L+ +Y KC +R A VF E
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG-------RQIH 210
R+V + A+IS + G A+ + +M +G P+++TF ++ +++H
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVH 183
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERD-VVSCTAIISGYAQLGLD 269
L K +D+ YVGS L+ Y+K + +A+ +F+ LP+RD V A+++GY+Q+
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
E+AL +F ++R EG+ + T SVL+A + +D+G+ +H +++ S +V+ N+L
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
IDMY K L + IF+ M ER + +WN++L + G+ L LF M ++PD
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG-IRPD 362
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIF-YDMTSGKIGVEPKKEH-YGCVVDLLGRAGRVEEAF 447
VT+ VL C +G +I Y + SG + + E + ++D+ + G + +A
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 448 EFIKKMPFEPTAAIWGSLLGACSVHS 473
M + +A+ W ++ V S
Sbjct: 423 MVFDSMRVKDSAS-WNIMINGYGVQS 447
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 249/449 (55%), Gaps = 24/449 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y L+ C AL +G+ H ++K+ S L T L+ +Y KC + +AR VF+E
Sbjct: 245 YGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHS 304
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQ 208
++V WTAMI Y+ G ++AL+LF +M +PN T A+V S LGR
Sbjct: 305 HVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRS 364
Query: 209 IHSLIIKSN-YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
+H L IK +D + V ++L+ MYAK + +A+ +FE E+D+V+ +IISG++Q G
Sbjct: 365 VHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNG 422
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE--VPSYVVL 325
EAL LF ++ E + N VT AS+ +A + L SL G +H + ++ S V +
Sbjct: 423 SIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHV 482
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
+L+D Y+KCG+ +R IFDT++E+ ++W+AM+ GYGK G+ LELF M ++ +
Sbjct: 483 GTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQ 542
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
KP+ T ++LS C H G+ + G F M P +HY C+VD+L RAG +E+
Sbjct: 543 -KPNESTFTSILSACGHTGMVNEGKKYFSSMYK-DYNFTPSTKHYTCMVDMLARAGELEQ 600
Query: 446 AFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS----- 500
A + I+KMP +P +G+ L C +HS D+G V ++L++ +A Y +S
Sbjct: 601 ALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYAS 660
Query: 501 ----XDVRSLRDMMLKKAVMKEPGRSRIE 525
+ +R++M ++ + K G S +E
Sbjct: 661 DGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 206/395 (52%), Gaps = 19/395 (4%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
LL++C + +LR+ H + + + + T+L+ LY +DAR VFD++PE +
Sbjct: 50 LLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHS 211
W M+ Y + + + L+ +++ G ++ F+ G++IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 212 LIIK-SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
++K ++D V G LLDMYAK G+I A +F + R+VV T++I+GY + L E
Sbjct: 167 QLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
E L LF ++R + N TY +++ A + L++L GK H +++S + L SL+
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
DMY KCG+++ +RR+F+ ++ W AM+VGY +G E L LF M+ E+KP+
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGV-EIKPNC 343
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
VT+ +VLSGC G +E+ L S K+G+ +V + + + +A +++
Sbjct: 344 VTIASVLSGC--GLIENLELGRSVHGLSIKVGIWDTNVA-NALVHMYAKCYQNRDA-KYV 399
Query: 451 KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRL 485
+M E W S++ S + ++ +F+ HR+
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 265 bits (677), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 159/449 (35%), Positives = 249/449 (55%), Gaps = 20/449 (4%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
L G+ +H ++KT + + L+T LI +Y KC + V + +P ++VV WT MIS
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAH 221
+ G A +AL +F +ML+SG++ + A+V + LG +H +++ Y
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD 380
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
+SL+ MYAK G + ++ IFE + ERD+VS AIISGYAQ +AL LF +++
Sbjct: 381 TPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKF 440
Query: 282 EGMQS-NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLT 340
+ +Q + T S+L A S +L GK +H V+RS + ++ +L+DMYSKCG L
Sbjct: 441 KTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLE 500
Query: 341 YSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
++R FD++ + V+SW ++ GYG HG+G LE+++ ++P+ V LAVLS C
Sbjct: 501 AAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSG-MEPNHVIFLAVLSSC 559
Query: 401 SHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAA 460
SH G+ +GL IF M GVEP EH CVVDLL RA R+E+AF+F K+ P+
Sbjct: 560 SHNGMVQQGLKIFSSMVR-DFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSID 618
Query: 461 IWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMML 511
+ G +L AC + ++ + ++E++ G+AG+Y L DV + M
Sbjct: 619 VLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMR 678
Query: 512 KKAVMKEPGRSRIELDQVLHTFHASDRSH 540
+ K PG S+IE++ TF + SH
Sbjct: 679 SLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 190 bits (482), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 203/402 (50%), Gaps = 15/402 (3%)
Query: 90 HDMKFKGYN----ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSL 145
++M+F+G LL + + Q +H + + + + ++ LY KCD +
Sbjct: 136 NEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHV 195
Query: 146 RDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM- 204
DA+ +FD+M +R++VSW MIS Y+ G S+ L L +M G P++ TF S+
Sbjct: 196 GDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVS 255
Query: 205 -------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCT 257
+GR +H I+K+ +D +++ ++L+ MY K GK + + E +P +DVV T
Sbjct: 256 GTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWT 315
Query: 258 AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
+ISG +LG E+AL +F ++ G + ASV+ + + L S D G VH +VLR
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF 377
NSLI MY+KCG+L S IF+ M ER ++SWNA++ GY ++ + + L LF
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
M+ + + D T++++L CS G G I + I P +VD+
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFI--RPCSLVDTALVDMY 493
Query: 438 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGV 479
+ G +E A + ++ + WG L+ H DI +
Sbjct: 494 SKCGYLEAAQRCFDSISWKDVVS-WGILIAGYGFHGKGDIAL 534
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 198/388 (51%), Gaps = 15/388 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +LL C S + L G +H ++ + ++ + L+ LY K L AR VF+EM
Sbjct: 49 FPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR 108
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-----GRQIHS 211
ER+VV WTAMI YS+ G +A +L +M G +P T + S + + +H
Sbjct: 109 ERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHD 168
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
+ +D + V +S+L++Y K + +A+ +F+ + +RD+VS +ISGYA +G E
Sbjct: 169 FAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSE 228
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
L L ++RG+G++ + T+ + L+ + L+ G+ +H ++++ + L+ +LI
Sbjct: 229 ILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALIT 288
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT-LMREENEVKPDG 390
MY KCG S R+ +T+ + V+ W M+ G + G + L +F+ +++ +++ +
Sbjct: 289 MYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEA 348
Query: 391 VTMLAVLSGCSHGGLEDRGLDIF-YDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF 449
+ +V++ C+ G D G + Y + G P ++ + + G ++++
Sbjct: 349 IA--SVVASCAQLGSFDLGASVHGYVLRHGYTLDTPA---LNSLITMYAKCGHLDKSLVI 403
Query: 450 IKKMPFEPTAAIWGSLLGACSVHSNVDI 477
++M E W +++ + NVD+
Sbjct: 404 FERMN-ERDLVSWNAIISGYA--QNVDL 428
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 126/242 (52%), Gaps = 9/242 (3%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M G D+ + +++ C + G VH ++++ Y LI +Y KC
Sbjct: 336 EMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCG 395
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM-LRSGTEPNEFTFATVX 202
L + +F+ M ER++VSW A+IS Y+Q +AL LF +M ++ + + FT ++
Sbjct: 396 HLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLL 455
Query: 203 SM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVV 254
+G+ IH ++I+S V ++L+DMY+K G + A+ F+ + +DVV
Sbjct: 456 QACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVV 515
Query: 255 SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV 314
S +I+GY G + AL+++ + GM+ N+V + +VL++ S + G ++ + +
Sbjct: 516 SWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSM 575
Query: 315 LR 316
+R
Sbjct: 576 VR 577
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 9/181 (4%)
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G ++ L F + + + T+ S+L A + L L G +H VL + S +
Sbjct: 25 GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS 84
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
+SL+++Y+K G L ++R++F+ M+ER V+ W AM+ Y + G E L MR + +
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQG-I 143
Query: 387 KPDGVTMLAVLSG--------CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLG 438
KP VT+L +LSG C H G D + + + + K +H G DL
Sbjct: 144 KPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 439 R 439
+
Sbjct: 204 Q 204
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 82 LLQMALCGHDMKFKGYN--------ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRT 133
L + L +MKFK +LL C S AL G+ +H +I++ P + T
Sbjct: 428 LCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDT 487
Query: 134 RLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEP 193
L+ +Y+KC L A+ FD + ++VVSW +I+ Y G AL ++ + L SG EP
Sbjct: 488 ALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEP 547
Query: 194 NEFTFATVXS 203
N F V S
Sbjct: 548 NHVIFLAVLS 557
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 265 bits (676), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 263/513 (51%), Gaps = 58/513 (11%)
Query: 98 NALLNECVSK-RALREGQRVHAHMIKTRYLPSVFLRTRLIVLYT-KCDSLRDARHVFDEM 155
N ++ +SK R L ++V + MI + S FL +L+ T + +L AR +FD
Sbjct: 24 NQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRF 83
Query: 156 PERNVVSWTAMISAYSQRG--YASQALNLFVQML-RSGTEPNEFTFATV--------XSM 204
N + A+++AYS +AS A + F M+ RS PN F + V +
Sbjct: 84 SFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAF 143
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYA------------------------------- 233
+H+ + KS + +V V ++LL YA
Sbjct: 144 STPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGY 203
Query: 234 -KDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE-GMQSNYVTY 291
+ G I A +FE +PERDV S AI++ Q GL EA+ LFR++ E ++ N VT
Sbjct: 204 ARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTV 263
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE 351
VL+A + +L K +H R ++ S V + NSL+D+Y KCGNL + +F +
Sbjct: 264 VCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASK 323
Query: 352 RTVMSWNAMLVGYGKHGEGREVLELFTLMREEN--EVKPDGVTMLAVLSGCSHGGLEDRG 409
+++ +WN+M+ + HG E + +F M + N ++KPD +T + +L+ C+HGGL +G
Sbjct: 324 KSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKG 383
Query: 410 LDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 469
++D+ + + G+EP+ EHYGC++DLLGRAGR +EA E + M + AIWGSLL AC
Sbjct: 384 RG-YFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNAC 442
Query: 470 SVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPG 520
+H ++D+ L+ + N G ++ + R R M+ + K PG
Sbjct: 443 KIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPG 502
Query: 521 RSRIELDQVLHTFHASDRSHPRREEVYIKVKEL 553
SRIE+D +H F++ D+SHP EE+Y+ + L
Sbjct: 503 WSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/461 (32%), Positives = 249/461 (54%), Gaps = 20/461 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ + C+S L +G+ V + Y VF+ + ++ LY KC + +A +F +M
Sbjct: 119 FTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMA 178
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX--------SMLGRQ 208
+R+V+ WT M++ ++Q G + +A+ + +M G + + + +GR
Sbjct: 179 KRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRS 238
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H + ++ +V V +SL+DMYAK G I A +F + + VS ++ISG+AQ GL
Sbjct: 239 VHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGL 298
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+A + +++ G Q + VT VL A S + SL G+ VH ++L+ V V +
Sbjct: 299 ANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVT-ATA 357
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
L+DMYSKCG L+ SR IF+ + + ++ WN M+ YG HG G+EV+ LF M E N ++P
Sbjct: 358 LMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESN-IEP 416
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D T ++LS SH GL ++G F M + K ++P ++HY C++DLL RAGRVEEA +
Sbjct: 417 DHATFASLLSALSHSGLVEQGQHWFSVMIN-KYKIQPSEKHYVCLIDLLARAGRVEEALD 475
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAG------NYFFLS-- 500
I + IW +LL C H N+ +G +++L++ + G N+F +
Sbjct: 476 MINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANK 535
Query: 501 -XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSH 540
+V +R +M A+ K PG S IE++ L TF D SH
Sbjct: 536 WKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 160/303 (52%), Gaps = 10/303 (3%)
Query: 111 REGQRVHAHMIKT-RYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
R ++HA +I T L + LI + + AR VFDE+P+R V + +MI
Sbjct: 31 RHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFA-TVXSML-------GRQIHSLIIKSNYDAH 221
YS+ + L L+ QM+ +P+ TF T+ + L G + + Y
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKND 150
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
V+V SS+L++Y K GK+ EA +F + +RDV+ T +++G+AQ G +A++ +R+++
Sbjct: 151 VFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN 210
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
EG + V +L A L G+ VH ++ R+ +P VV++ SL+DMY+K G +
Sbjct: 211 EGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEV 270
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ R+F M +T +SW +++ G+ ++G + E M+ +PD VT++ VL CS
Sbjct: 271 ASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLG-FQPDLVTLVGVLVACS 329
Query: 402 HGG 404
G
Sbjct: 330 QVG 332
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 265/502 (52%), Gaps = 55/502 (10%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
L+ ++ H +MI T + I + LR A VF P N MI A
Sbjct: 28 LKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRA 87
Query: 170 YS---QRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNY 218
S + S A+ ++ ++ +P+ FTF V + GRQIH ++ +
Sbjct: 88 LSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGF 147
Query: 219 DAHVYVGSSLLDMY-------------------------------AKDGKIHEARGIFEC 247
D+ V+V + L+ MY K G++ EAR + E
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 248 LP--ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLD 305
+P R+ VS T +ISGYA+ G EA+++F+++ E ++ + VT +VL+A + L SL+
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLE 267
Query: 306 HGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYG 365
G+++ ++V + V L N++IDMY+K GN+T + +F+ + ER V++W ++ G
Sbjct: 268 LGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLA 327
Query: 366 KHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEP 425
HG G E L +F M + V+P+ VT +A+LS CSH G D G +F M S K G+ P
Sbjct: 328 THGHGAEALAMFNRMVKAG-VRPNDVTFIAILSACSHVGWVDLGKRLFNSMRS-KYGIHP 385
Query: 426 KKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRL 485
EHYGC++DLLGRAG++ EA E IK MPF+ AAIWGSLL A +VH ++++G L
Sbjct: 386 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSEL 445
Query: 486 LEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHAS 536
+++E N+GNY L+ + R +R+MM V K G S IE++ ++ F +
Sbjct: 446 IKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISG 505
Query: 537 DRSHPRREEVYIKVKELSVRFK 558
D +HP+ E ++ ++E+ ++ +
Sbjct: 506 DLTHPQVERIHEILQEMDLQIQ 527
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/465 (32%), Positives = 256/465 (55%), Gaps = 25/465 (5%)
Query: 80 QPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLY 139
+ ++M G D ++ + C +R G+ H +I + + F+ + L LY
Sbjct: 149 EVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY 208
Query: 140 TKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRS-GTEPNEFTF 198
DAR VFDEMPE +V+ WTA++SA+S+ +AL LF M R G P+ TF
Sbjct: 209 GVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTF 268
Query: 199 ATVXSMLG--------RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE 250
TV + G ++IH +I + ++V V SSLLDMY K G + EAR +F + +
Sbjct: 269 GTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK 328
Query: 251 RDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQV 310
++ VS +A++ GY Q G E+A+++FR++ + + + +VL A +GLA++ GK++
Sbjct: 329 KNSVSWSALLGGYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEI 384
Query: 311 HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEG 370
H +R V+++++LID+Y K G + + R++ M R +++WNAML ++G G
Sbjct: 385 HGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRG 444
Query: 371 REVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
E + F M ++ +KPD ++ +A+L+ C H G+ D G + F M G++P EHY
Sbjct: 445 EEAVSFFNDMVKKG-IKPDYISFIAILTACGHTGMVDEGRNYFVLMAK-SYGIKPGTEHY 502
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVD-IGVFVGHRLLEIE 489
C++DLLGRAG EEA +++ A++WG LLG C+ +++ + + R++E+E
Sbjct: 503 SCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELE 562
Query: 490 TGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIE 525
+Y LS D ++R +M+++ V K G+S I+
Sbjct: 563 PKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/395 (30%), Positives = 206/395 (52%), Gaps = 40/395 (10%)
Query: 95 KGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD-SLRDARHVFD 153
K Y +LL C + G + HAH++K+ + L+ LY K +R+ R VFD
Sbjct: 62 KLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFD 121
Query: 154 EMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------L 205
++ +SWT+M+S Y +AL +FV+M+ G + NEFT ++ L
Sbjct: 122 GRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRL 181
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
GR H ++I ++ + ++ S+L +Y + + +AR +F+ +PE DV+ TA++S +++
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 266 LGLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
L EEAL LF + RG+G+ + T+ +VLTA L L GK++H ++ + + S VV
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 301
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
+++SL+DMY KCG++ +R++F+ M ++ +SW+A+L GY ++GE + +E+F M E+
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK- 360
Query: 385 EVKPDGVTMLAVLSGCS-----------HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCV 433
D VL C+ HG RG G + VE +
Sbjct: 361 ----DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG-------CFGNVIVES------AL 403
Query: 434 VDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
+DL G++G ++ A KM W ++L A
Sbjct: 404 IDLYGKSGCIDSASRVYSKMSIR-NMITWNAMLSA 437
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 2/141 (1%)
Query: 265 QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
+LG EA+ + + + YAS+L + + S HG Q H HV++S + +
Sbjct: 38 KLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRN 97
Query: 325 LQNSLIDMYSKCG-NLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+ NSL+ +Y K G + +RR+FD + +SW +M+ GY E + LE+F M
Sbjct: 98 VGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSF 157
Query: 384 NEVKPDGVTMLAVLSGCSHGG 404
+ + T+ + + CS G
Sbjct: 158 G-LDANEFTLSSAVKACSELG 177
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 234/426 (54%), Gaps = 24/426 (5%)
Query: 120 MIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQA 179
++ R SV L T L+ +Y K D A HVFD+M +N VSWTAMIS
Sbjct: 176 LVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMG 235
Query: 180 LNLFVQMLRSGTEPNEFTFATVX---------SMLGRQIHSLIIKSNYDAHVYVGSSLLD 230
++LF M R PN T +V S L ++IH + A + ++ +
Sbjct: 236 VDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMT 295
Query: 231 MYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVT 290
MY + G + +R +FE RDVV +++ISGYA+ G E ++L Q+R EG+++N VT
Sbjct: 296 MYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVT 355
Query: 291 YASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ 350
++++A + L VH+ +L+ S+++L N+LIDMY+KCG+L+ +R +F +
Sbjct: 356 LLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELT 415
Query: 351 ERTVMSWNAMLVGYGKHGEGREVLELFT-LMREENEVKPDGVTMLAVLSGCSHGGLEDRG 409
E+ ++SW++M+ YG HG G E LE+F +++ +EV D + LA+LS C+H GL +
Sbjct: 416 EKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEV--DDMAFLAILSACNHAGLVEEA 473
Query: 410 LDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 469
IF +GK + EHY C ++LLGR G++++AFE MP +P+A IW SLL AC
Sbjct: 474 QTIF--TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSAC 531
Query: 470 SVHSNVDI-GVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEP 519
H +D+ G + + L++ E N NY LS +R +M ++ + K
Sbjct: 532 ETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCY 591
Query: 520 GRSRIE 525
G S+IE
Sbjct: 592 GFSKIE 597
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 197/421 (46%), Gaps = 33/421 (7%)
Query: 90 HDMKFKGYNALLNECVSKRALRE-----GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS 144
H + G+ A+L + A ++ G ++H +K + LI +Y K
Sbjct: 38 HSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSR 97
Query: 145 LRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM 204
R VFDEM R+ VS+ ++I++ Q G +A+ L +M G P A++ ++
Sbjct: 98 KYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLAL 157
Query: 205 ---------LGRQIHSLI-IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVV 254
+ R H+L+ + V + ++L+DMY K A +F+ + ++ V
Sbjct: 158 CTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEV 217
Query: 255 SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG----KQV 310
S TA+ISG E +DLFR ++ E ++ N VT SVL A L++G K++
Sbjct: 218 SWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPA---CVELNYGSSLVKEI 274
Query: 311 HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEG 370
H R + L + + MY +CGN++ SR +F+T + R V+ W++M+ GY + G+
Sbjct: 275 HGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDC 334
Query: 371 REVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
EV+ L MR+E ++ + VT+LA++S C++ L + + K G
Sbjct: 335 SEVMNLLNQMRKEG-IEANSVTLLAIVSACTNSTLLSFASTVHSQIL--KCGFMSHILLG 391
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIET 490
++D+ + G + A E ++ E W S++ A +H + G LEI
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELT-EKDLVSWSSMINAYGLHGH-------GSEALEIFK 443
Query: 491 G 491
G
Sbjct: 444 G 444
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 122/261 (46%), Gaps = 36/261 (13%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
A+++ C + L VH+ ++K ++ + L LI +Y KC SL AR VF E+ E+
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNY 218
++VSW++MI+AY G+ S+AL +F M++ G E ++ F + S
Sbjct: 418 DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACN------------ 465
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGI--FECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
H + ++ + GK H + + C I+ + G ++A ++
Sbjct: 466 --HAGLVEEAQTIFTQAGKYHMPVTLEHYACY-----------INLLGRFGKIDDAFEVT 512
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLD-HGKQVHNHVLRSEV--PSYVVLQNSLIDMY 333
+ M+ + ++S+L+A LD GK + N +++SE P+ VL L ++
Sbjct: 513 INMP---MKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVL---LSKIH 566
Query: 334 SKCGNLTYSRRIFDTMQERTV 354
++ GN + + MQ R +
Sbjct: 567 TESGNYHAAEEVRRVMQRRKL 587
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 261 bits (668), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 247/464 (53%), Gaps = 30/464 (6%)
Query: 89 GHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDA 148
G+ + + +L C R ++ G VH ++KT + ++++ T L+ +Y C +
Sbjct: 102 GYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYG 161
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR- 207
VF+++P+ NVV+W ++IS + S A+ F +M +G + NE + GR
Sbjct: 162 LRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRC 221
Query: 208 -------QIHSLIIKSNYDAH--------VYVGSSLLDMYAKDGKIHEARGIFECLPERD 252
H + +D + V + +SL+DMYAK G + AR +F+ +PER
Sbjct: 222 KDIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERT 281
Query: 253 VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA--LSGLASLDHGKQV 310
+VS +II+GY+Q G EEAL +F + G+ + VT+ SV+ A + G + L G+ +
Sbjct: 282 LVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQL--GQSI 339
Query: 311 HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEG 370
H +V ++ + +L++MY+K G+ +++ F+ ++++ ++W +++G HG G
Sbjct: 340 HAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHG 399
Query: 371 REVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
E L +F M+E+ PDG+T L VL CSH GL + G F +M G+EP EHY
Sbjct: 400 NEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLH-GLEPTVEHY 458
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIET 490
GC+VD+L RAGR EEA +K MP +P IWG+LL C +H N+++ + + E E
Sbjct: 459 GCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEE 518
Query: 491 GNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSRIE 525
+G Y LS DV+ +R+ M K V K G S +E
Sbjct: 519 LGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 212/421 (50%), Gaps = 25/421 (5%)
Query: 92 MKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD---SLRDA 148
M K Y +L++ + R+L E ++H MIK+ + +V +RLI T C +L A
Sbjct: 1 MMKKHYKPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYA 60
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS----- 203
R VF+ + +V W +MI YS +AL + +MLR G P+ FTF V
Sbjct: 61 RSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGL 120
Query: 204 ---MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
G +H ++K+ ++ ++YV + LL MY G+++ +FE +P+ +VV+ ++I
Sbjct: 121 RDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLI 180
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV------ 314
SG+ +A++ FR+++ G+++N +L A + GK H +
Sbjct: 181 SGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFD 240
Query: 315 --LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
+S+V V+L SLIDMY+KCG+L +R +FD M ERT++SWN+++ GY ++G+ E
Sbjct: 241 PYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEE 300
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
L +F M + + PD VT L+V+ G G I ++ K G
Sbjct: 301 ALCMFLDMLDLG-IAPDKVTFLSVIRASMIQGCSQLGQSIHAYVS--KTGFVKDAAIVCA 357
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
+V++ + G E A + + + + T A W ++ + H + + + + R+ E GN
Sbjct: 358 LVNMYAKTGDAESAKKAFEDLEKKDTIA-WTVVIIGLASHGHGNEALSIFQRMQ--EKGN 414
Query: 493 A 493
A
Sbjct: 415 A 415
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/466 (31%), Positives = 247/466 (53%), Gaps = 24/466 (5%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
+ +G +H + K + +RT L+ +Y K SL++A +F MP +NVV++ AMIS
Sbjct: 268 IEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISG 327
Query: 170 YSQRG-----YASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKS 216
+ Q +S+A LF+ M R G EP+ TF+ V GRQIH+LI K+
Sbjct: 328 FLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN 387
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
N+ + ++GS+L+++YA G + F ++D+ S T++I + Q E A DLF
Sbjct: 388 NFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLF 447
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKC 336
RQL ++ T + +++A + A+L G+Q+ + ++S + ++ ++ S I MY+K
Sbjct: 448 RQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKS 507
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
GN+ + ++F +Q V +++AM+ +HG E L +F M+ +KP+ L V
Sbjct: 508 GNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHG-IKPNQQAFLGV 566
Query: 397 LSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE 456
L C HGGL +GL F M + + P ++H+ C+VDLLGR GR+ +A I F+
Sbjct: 567 LIACCHGGLVTQGLKYFQCMKN-DYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQ 625
Query: 457 PTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFL---------SXDVRSLR 507
W +LL +C V+ + IG V RL+E+E +G+Y L + +R
Sbjct: 626 DHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVR 685
Query: 508 DMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKEL 553
++M + V KEP S I + H+F +D SHP + +Y ++ +
Sbjct: 686 ELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 180/336 (53%), Gaps = 21/336 (6%)
Query: 95 KGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
+GY L ++ G+ H HMIK+ P ++L L+ +Y KC L AR +FD
Sbjct: 48 EGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDR 107
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LG 206
MPERN++S+ ++IS Y+Q G+ QA+ LF++ + + ++FT+A LG
Sbjct: 108 MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG 167
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
+H L++ + V++ + L+DMY+K GK+ +A +F+ ERD VS ++ISGY ++
Sbjct: 168 ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRV 227
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYA--SVLTALS---GLASLDHGKQVHNHVLRSEVPS 321
G EE L+L ++ +G+ N TYA SVL A ++ G +H + + +
Sbjct: 228 GAAEEPLNLLAKMHRDGL--NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEF 285
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE-----GREVLEL 376
+V++ +L+DMY+K G+L + ++F M + V+++NAM+ G+ + E E +L
Sbjct: 286 DIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
F M+ ++P T VL CS + G I
Sbjct: 346 FMDMQRRG-LEPSPSTFSVVLKACSAAKTLEYGRQI 380
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 139/254 (54%), Gaps = 6/254 (2%)
Query: 204 MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
+LG+ H +IKS+ + +Y+ ++LL+MY K ++ AR +F+ +PER+++S ++ISGY
Sbjct: 64 VLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGY 123
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
Q+G E+A++LF + R ++ + TYA L LD G+ +H V+ + + V
Sbjct: 124 TQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQV 183
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
L N LIDMYSKCG L + +FD ER +SWN+++ GY + G E L L M +
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRD 243
Query: 384 NEVKPDGVTMLAVLSGCS---HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRA 440
+ + +VL C + G ++G+ I + K+G+E ++D+ +
Sbjct: 244 G-LNLTTYALGSVLKACCINLNEGFIEKGMAI--HCYTAKLGMEFDIVVRTALLDMYAKN 300
Query: 441 GRVEEAFEFIKKMP 454
G ++EA + MP
Sbjct: 301 GSLKEAIKLFSLMP 314
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/455 (34%), Positives = 246/455 (54%), Gaps = 27/455 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ + C +REG+++H + K + ++++ L+ Y C R+A VF EMP
Sbjct: 109 FPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMP 168
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
R+VVSWT +I+ +++ G +AL+ F +M EPN T+ V LG+
Sbjct: 169 VRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKG 225
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH LI+K + G++L+DMY K ++ +A +F L ++D VS ++ISG
Sbjct: 226 IHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCER 285
Query: 269 DEEALDLFRQLR-GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
+EA+DLF ++ G++ + SVL+A + L ++DHG+ VH ++L + + +
Sbjct: 286 SKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGT 345
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
+++DMY+KCG + + IF+ ++ + V +WNA+L G HG G E L F M + K
Sbjct: 346 AIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLG-FK 404
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
P+ VT LA L+ C H GL D G F+ M S + + PK EHYGC++DLL RAG ++EA
Sbjct: 405 PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEAL 464
Query: 448 EFIKKMPFEPTAAIWGSLLGACSVHSNV-DIGVFVGHRLLEIETGNAGNYFFLSX----- 501
E +K MP +P I G++L AC + ++ + L+IE ++G Y LS
Sbjct: 465 ELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAAN 524
Query: 502 ----DVRSLRDMMLKKAVMKEPGRSRIE----LDQ 528
DV +R +M K + K PG S IE LDQ
Sbjct: 525 RRWDDVARIRRLMKVKGISKVPGSSYIEKFMTLDQ 559
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 163/321 (50%), Gaps = 18/321 (5%)
Query: 162 SWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLI 213
S+ ++S+Y+ + + + +G P+ FTF V G+QIH ++
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 214 IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEAL 273
K + +YV +SL+ Y G+ A +F +P RDVVS T II+G+ + GL +EAL
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 274 DLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMY 333
D F ++ ++ N TY VL + + L GK +H +L+ + N+LIDMY
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMY 249
Query: 334 SKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTM 393
KC L+ + R+F ++++ +SWN+M+ G +E ++LF+LM+ + +KPDG +
Sbjct: 250 VKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHIL 309
Query: 394 LAVLSGCSHGGLEDRGLDIF-YDMTSGKIGVEPKKEHYG-CVVDLLGRAGRVEEAFEFIK 451
+VLS C+ G D G + Y +T+G H G +VD+ + G +E A E
Sbjct: 310 TSVLSACASLGAVDHGRWVHEYILTAGI----KWDTHIGTAIVDMYAKCGYIETALEIFN 365
Query: 452 KMPFEPTAAIWGSLLGACSVH 472
+ W +LLG ++H
Sbjct: 366 GIR-SKNVFTWNALLGGLAIH 385
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 259 bits (663), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/444 (36%), Positives = 241/444 (54%), Gaps = 20/444 (4%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER-N 159
L C + + G+ +H +++ ++ LR LI Y C + DAR VFDEMP+ +
Sbjct: 132 LKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVD 191
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT---FATVXSMLG-----RQIHS 211
V+++ +++ Y Q + AL+LF M +S N T F + S LG H
Sbjct: 192 AVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHV 251
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
L IK D +++ ++L+ MY K G I AR IF+C +DVV+ +I YA+ GL EE
Sbjct: 252 LCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
+ L RQ++ E M+ N T+ +L++ + + G+ V + + + +L +L+D
Sbjct: 312 CVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVD 371
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN-EVKPDG 390
MY+K G L + IF+ M+++ V SW AM+ GYG HG RE + LF M EEN +V+P+
Sbjct: 372 MYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNE 431
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
+T L VL+ CSHGGL G+ F M PK EHYGCVVDLLGRAG++EEA+E I
Sbjct: 432 ITFLVVLNACSHGGLVMEGIRCFKRMVEA-YSFTPKVEHYGCVVDLLGRAGQLEEAYELI 490
Query: 451 KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN-------AGNYFFLSXDV 503
+ +P + W +LL AC V+ N D+G V RL E+ + AG +
Sbjct: 491 RNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPE 550
Query: 504 RSLRDMMLKKAVMKEPGRSRIELD 527
+SL D L K KE G S IE++
Sbjct: 551 KSL-DNELNKG-RKEAGYSAIEIE 572
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 185/382 (48%), Gaps = 14/382 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
L+N+ S R E R+H +M+KT F ++L+ + D +R A +F+ + N
Sbjct: 31 LINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLD-IRYASSIFEHVSNTN 89
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ--------IHS 211
+ + MI YS +A ++F Q+ G + F+F T R+ +H
Sbjct: 90 LFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHG 149
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER-DVVSCTAIISGYAQLGLDE 270
+ ++S + + ++L+ Y GKI +AR +F+ +P+ D V+ + +++GY Q+
Sbjct: 150 IALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKA 209
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
ALDLFR +R + N T S L+A+S L L + H ++ + + L +LI
Sbjct: 210 LALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALI 269
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
MY K G ++ +RRIFD + V++WN M+ Y K G E + L M+ E ++KP+
Sbjct: 270 GMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE-KMKPNS 328
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
T + +LS C++ G + + +I ++ +VD+ + G +E+A E
Sbjct: 329 STFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGT--ALVDMYAKVGLLEKAVEIF 386
Query: 451 KKMPFEPTAAIWGSLLGACSVH 472
+M + + W +++ H
Sbjct: 387 NRMKDKDVKS-WTAMISGYGAH 407
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 35/313 (11%)
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
+IH ++K+ D + S LL ++ I A IFE + ++ +I GY+
Sbjct: 46 RIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISD 104
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
E A +F QLR +G+ + ++ + L + S + G+ +H LRS + L+N
Sbjct: 105 EPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLRN 164
Query: 328 SLIDMYSKCGNLTYSRRIFDTM-QERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
+LI Y CG ++ +R++FD M Q ++++ ++ GY + + L+LF +MR ++EV
Sbjct: 165 ALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMR-KSEV 223
Query: 387 KPDGVTMLAVLSGCSH----GGLEDR-------GLDIFYDMTSGKIGVEPKKE------- 428
+ T+L+ LS S G E GLD+ + + IG+ K
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 429 -----------HYGCVVDLLGRAGRVEEAFEFIKKMPFE---PTAAIWGSLLGACSVHSN 474
+ C++D + G +EE +++M +E P ++ + LL +C+
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEA 343
Query: 475 VDIGVFVGHRLLE 487
+G V L E
Sbjct: 344 AFVGRTVADLLEE 356
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 11/164 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ LL+ C A G+ V + + R L T L+ +Y K L A +F+ M
Sbjct: 331 FVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK 390
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE--PNEFTFATVXSMLG-------- 206
+++V SWTAMIS Y G A +A+ LF +M + PNE TF V +
Sbjct: 391 DKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEG 450
Query: 207 -RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
R ++ ++ V ++D+ + G++ EA + LP
Sbjct: 451 IRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLP 494
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 160/483 (33%), Positives = 256/483 (53%), Gaps = 45/483 (9%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y++L+ S A R G+ + AH+ K + V ++T LI Y+ +R+AR VFDEMP
Sbjct: 874 YSSLVK--ASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMP 931
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKS 216
ER+ ++WT M+SAY + A +L QM +E NE T
Sbjct: 932 ERDDIAWTTMVSAYRRVLDMDSANSLANQM----SEKNEAT------------------- 968
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
+ L++ Y G + +A +F +P +D++S T +I GY+Q EA+ +F
Sbjct: 969 --------SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVF 1020
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKC 336
++ EG+ + VT ++V++A + L L+ GK+VH + L++ V + ++L+DMYSKC
Sbjct: 1021 YKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC 1080
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
G+L + +F + ++ + WN+++ G HG +E L++F M E+ VKP+ VT ++V
Sbjct: 1081 GSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMES-VKPNAVTFVSV 1139
Query: 397 LSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE 456
+ C+H GL D G I+ M + EHYG +V L +AG + EA E I M FE
Sbjct: 1140 FTACTHAGLVDEGRRIYRSMID-DYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE 1198
Query: 457 PTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLR 507
P A IWG+LL C +H N+ I ++L+ +E N+G YF L DV +R
Sbjct: 1199 PNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIR 1258
Query: 508 DMMLKKAVMKE-PGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDL 566
M + + K PG S I +D+ H F A+D+SH +EV + + E+ + AGYV +
Sbjct: 1259 GRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQET 1318
Query: 567 SCV 569
V
Sbjct: 1319 ENV 1321
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 259/507 (51%), Gaps = 34/507 (6%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP--E 157
L+ +++L+ + +HA I+ V + I Y KC L A+ VF+ + +
Sbjct: 159 LIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGD 218
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQI 209
R VVSW +M AYS G A A L+ MLR +P+ TF + + GR I
Sbjct: 219 RTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLI 278
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
HS I D + ++ + MY+K AR +F+ + R VS T +ISGYA+ G
Sbjct: 279 HSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDM 338
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV----PSYVVL 325
+EAL LF + G + + VT S+++ SL+ GK + R+++ V++
Sbjct: 339 DEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID---ARADIYGCKRDNVMI 395
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
N+LIDMYSKCG++ +R IFD E+TV++W M+ GY +G E L+LF+ M + +
Sbjct: 396 CNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDL-D 454
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
KP+ +T LAVL C+H G ++G + F+ M + P +HY C+VDLLGR G++EE
Sbjct: 455 YKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ-VYNISPGLDHYSCMVDLLGRKGKLEE 513
Query: 446 AFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDVRS 505
A E I+ M +P A IWG+LL AC +H NV I L +E A Y ++ +
Sbjct: 514 ALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAAPYVEMANIYAA 573
Query: 506 ---------LRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVR 556
+R +M ++ + K PG S I+++ H+F + H E +Y + LS+
Sbjct: 574 AGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEVIYFTLNGLSL- 632
Query: 557 FKEAGYVPDLSCVLHDVDEEQKEKILL 583
+ D + DV +EQ ++ +
Sbjct: 633 -----FAKDKHVLYKDVYKEQSYELFI 654
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 192/388 (49%), Gaps = 38/388 (9%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+ VHAH+IK+ + VF+ T + ++ KC+S+ A VF+ MPER+ +W AM+S + Q
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQS 131
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAHVYVG 225
G+ +A +LF +M + P+ T T+ L +H++ I+ D V V
Sbjct: 132 GHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVA 191
Query: 226 SSLLDMYAKDGKIHEARGIFECLP--ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG 283
++ + Y K G + A+ +FE + +R VVS ++ Y+ G +A L+ + E
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 284 MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSR 343
+ + T+ ++ + +L G+ +H+H + + N+ I MYSK + +R
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 344 RIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHG 403
+FD M RT +SW M+ GY + G+ E L LF M + E KPD VT+L+++SGC
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKF 370
Query: 404 GLEDRGLDIFYDMTSGKIGVEPKKEHYGC----------VVDLLGRAGRVEEAFEFIKKM 453
G + +GK ++ + + YGC ++D+ + G + EA +
Sbjct: 371 G----------SLETGK-WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNT 419
Query: 454 PFEPTAAIWGSLLGACSVHSNVDIGVFV 481
P E T W +++ +++ G+F+
Sbjct: 420 P-EKTVVTWTTMIAGYALN-----GIFL 441
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 134/254 (52%), Gaps = 11/254 (4%)
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR--------QIH 210
+V +W I R ++L LF +M R G EPN FTF V R +H
Sbjct: 16 SVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVH 75
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
+ +IKS + + V+VG++ +DM+ K + A +FE +PERD + A++SG+ Q G +
Sbjct: 76 AHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
+A LFR++R + + VT +++ + S SL + +H +R V V + N+ I
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 331 DMYSKCGNLTYSRRIFDTMQ--ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
Y KCG+L ++ +F+ + +RTV+SWN+M Y GE + L+ LM E E KP
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE-EFKP 254
Query: 389 DGVTMLAVLSGCSH 402
D T + + + C +
Sbjct: 255 DLSTFINLAASCQN 268
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 156/479 (32%), Positives = 245/479 (51%), Gaps = 64/479 (13%)
Query: 126 LPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQ 185
LP V + + ++ + + + RH ++ VSWT+ I+ ++ G ++A F
Sbjct: 4 LPVVGITSPALITHKNHANPKIQRH--NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSD 61
Query: 186 MLRSGTEPNEFTFATVXS----------MLGRQIHSLIIKSNYD-AHVYVGSSLLDMYAK 234
M +G EPN TF + S LG +H K D HV VG++++ MY+K
Sbjct: 62 MTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSK 121
Query: 235 DGKIHEAR-------------------------------GIFECLPERDVVSCTAIISGY 263
G+ +AR +F+ +PERD++S TA+I+G+
Sbjct: 122 RGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGF 181
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
+ G EEAL FR+++ G++ +YV + L A + L +L G VH +VL + + V
Sbjct: 182 VKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNV 241
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+ NSLID+Y +CG + ++R++F M++RTV+SWN+++VG+ +G E L F M+E+
Sbjct: 242 RVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEK 301
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRV 443
KPD VT L+ CSH GL + GL F M + P+ EHYGC+VDL RAGR+
Sbjct: 302 G-FKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC-DYRISPRIEHYGCLVDLYSRAGRL 359
Query: 444 EEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLL----EIETGNAGNYFFL 499
E+A + ++ MP +P + GSLL ACS H N + + RL+ ++ + NY L
Sbjct: 360 EDALKLVQSMPMKPNEVVIGSLLAACSNHGN---NIVLAERLMKHLTDLNVKSHSNYVIL 416
Query: 500 SX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIK 549
S +R M + K+PG S IE+D +H F A D +H E YI+
Sbjct: 417 SNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHV--ETTYIR 473
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 9/177 (5%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M + G + A LN C + AL G VH +++ + +V + LI LY +C
Sbjct: 196 EMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCG 255
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA---T 200
+ AR VF M +R VVSW ++I ++ G A ++L F +M G +P+ TF T
Sbjct: 256 CVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALT 315
Query: 201 VXSMLGRQIHSL----IIKSNYDAHVYVG--SSLLDMYAKDGKIHEARGIFECLPER 251
S +G L I+K +Y + L+D+Y++ G++ +A + + +P +
Sbjct: 316 ACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK 372
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 256 bits (653), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 164/515 (31%), Positives = 270/515 (52%), Gaps = 62/515 (12%)
Query: 110 LREGQRVHAHMIKTRYLP-SVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
L E +++H H+I + L +L L+ Y + + A VF MP +V S+ MI
Sbjct: 146 LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIV 205
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSN--Y 218
Y+++G++ +AL L+ +M+ G EP+E+T ++ LG+ +H I + Y
Sbjct: 206 GYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVY 265
Query: 219 DAHVYVGSSLLDMY-----------------AKD--------------GKIHEARGIFEC 247
+++ + ++LLDMY KD G + A+ +F+
Sbjct: 266 SSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQ 325
Query: 248 LPERDVVSCTAIISGYAQLGLDEEAL-DLFRQLR-GEGMQSNYVTYASVLTALSGLASLD 305
+P+RD+VS +++ GY++ G D+ + +LF ++ E ++ + VT S+++ + L
Sbjct: 326 MPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELS 385
Query: 306 HGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYG 365
HG+ VH V+R ++ L ++LIDMY KCG + + +F T E+ V W +M+ G
Sbjct: 386 HGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA 445
Query: 366 KHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEP 425
HG G++ L+LF M+EE V P+ VT+LAVL+ CSH GL + GL +F M K G +P
Sbjct: 446 FHGNGQQALQLFGRMQEEG-VTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKD-KFGFDP 503
Query: 426 KKEHYGCVVDLLGRAGRVEEAFEFI-KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHR 484
+ EHYG +VDLL RAGRVEEA + + KKMP P+ ++WGS+L AC +++
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTE 563
Query: 485 LLEIETGNAGNYFFLSXDVRSL---------RDMMLKKAVMKEPGRSRIELDQVLHTFHA 535
LL++E G Y LS ++ R+ M + V K G S + + LH F A
Sbjct: 564 LLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVA 623
Query: 536 SDR-SHPRREEVYIKVKELSVRFKEAGYVPDLSCV 569
+++ +HPR E+ ++ L K P L C+
Sbjct: 624 AEKQNHPRWTEIKRILQHLYNEMK-----PKLDCL 653
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 199/427 (46%), Gaps = 69/427 (16%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVL--YTKCDSLRDARHVF-DEMP 156
LL C S+ ++ V A +++ + F +RLI T ++L A+ +F + P
Sbjct: 40 LLENCNSRNQFKQ---VLAQIMRFNLICDTFPMSRLIFFSAITYPENLDLAKLLFLNFTP 96
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF---ATVXSMLG--RQIHS 211
NV + MISA S ++ L+ M+R P+ TF S L +QIH
Sbjct: 97 NPNVFVYNTMISAVSSS--KNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVKQIHC 154
Query: 212 LIIKSN-YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
II S Y+ +SL+ Y + G A +F +P DV S +I GYA+ G
Sbjct: 155 HIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSL 214
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY---VVLQN 327
EAL L+ ++ +G++ + T S+L L+ + GK VH + R P Y ++L N
Sbjct: 215 EALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRG-PVYSSNLILSN 273
Query: 328 SLIDMYSKC-------------------------------GNLTYSRRIFDTMQERTVMS 356
+L+DMY KC G++ ++ +FD M +R ++S
Sbjct: 274 ALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVS 333
Query: 357 WNAMLVGYGKHG-EGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
WN++L GY K G + R V ELF M +VKPD VTM++++SG ++ G +
Sbjct: 334 WNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNG----------E 383
Query: 416 MTSGK------IGVEPKKEHY--GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 467
++ G+ I ++ K + + ++D+ + G +E AF + K E A+W S++
Sbjct: 384 LSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF-MVFKTATEKDVALWTSMIT 442
Query: 468 ACSVHSN 474
+ H N
Sbjct: 443 GLAFHGN 449
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 109/269 (40%), Gaps = 51/269 (18%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
+L++ + L G+ VH +I+ + FL + LI +Y KC + A VF E+
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLII---- 214
+V WT+MI+ + G QAL LF +M G PN T V + HS ++
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS---HSGLVEEGL 489
Query: 215 --------KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE-CLPERDVVSCTAIISGYAQ 265
K +D SL+D+ + G++ EA+ I + +P R S I +
Sbjct: 490 HVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACR 549
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
G D E +L AL+ L L+ K+ YV+L
Sbjct: 550 GGEDIETAEL---------------------ALTELLKLEPEKE----------GGYVLL 578
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTV 354
N +Y+ G YS + + M+ R V
Sbjct: 579 SN----IYATVGRWGYSDKTREAMENRGV 603
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 147/436 (33%), Positives = 237/436 (54%), Gaps = 54/436 (12%)
Query: 163 WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLII 214
W +I +S +++++++QMLR G P+ T+ + LG +H ++
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 215 KSNYDAHVYV-------------------------------GSSLLDMYAKDGKIHEARG 243
KS + +++ +S+LD YAK G + AR
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 244 IFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLA 302
+F+ + ERDVV+ +++I GY + G +AL++F Q+ R ++N VT SV+ A + L
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 303 SLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF--DTMQERTVMSWNAM 360
+L+ GK VH ++L +P V+LQ SLIDMY+KCG++ + +F +++E + WNA+
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 361 LVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGK 420
+ G HG RE L+LF MRE +++ PD +T L +L+ CSHGGL F +
Sbjct: 316 IGGLASHGFIRESLQLFHKMRE-SKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES- 373
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVF 480
G EPK EHY C+VD+L RAG V++A +FI +MP +PT ++ G+LL C H N+++
Sbjct: 374 -GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAET 432
Query: 481 VGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLH 531
VG +L+E++ N G Y L+ RS+R+ M KK V K G S ++LD H
Sbjct: 433 VGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRH 492
Query: 532 TFHASDRSHPRREEVY 547
F A D++H +++Y
Sbjct: 493 RFIAHDKTHFHSDKIY 508
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 94/172 (54%), Gaps = 11/172 (6%)
Query: 139 YTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFT 197
Y K + AR VFDEM ER+VV+W++MI Y +RG ++AL +F QM+R G ++ NE T
Sbjct: 184 YAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT 243
Query: 198 FATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIF--EC 247
+V G+ +H I+ + V + +SL+DMYAK G I +A +F
Sbjct: 244 MVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRAS 303
Query: 248 LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS 299
+ E D + AII G A G E+L LF ++R + + +T+ +L A S
Sbjct: 304 VKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACS 355
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 142/321 (44%), Gaps = 50/321 (15%)
Query: 208 QIHSLIIKSNY-DAHVYVGSSL-LDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
+IH+L+I + +V +L + G + A L + +I G++
Sbjct: 26 KIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSN 85
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
E+++ ++ Q+ G+ +++TY ++ + S L++ G +H V++S + + +
Sbjct: 86 SRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFI 145
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAML------------------------ 361
N+LI MY + +R++FD M + +++WN++L
Sbjct: 146 CNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDV 205
Query: 362 -------VGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRG----- 409
GY K GE + LE+F M K + VTM++V+ C+H G +RG
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 410 --LDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE-FIKKMPFEPTAAIWGSLL 466
LD+ +T + ++ ++D+ + G + +A+ F + E A +W +++
Sbjct: 266 YILDVHLPLT---VILQTS------LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAII 316
Query: 467 GACSVHSNVDIGVFVGHRLLE 487
G + H + + + H++ E
Sbjct: 317 GGLASHGFIRESLQLFHKMRE 337
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVF--DEMP 156
+++ C AL G+ VH +++ +V L+T LI +Y KC S+ DA VF +
Sbjct: 246 SVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVK 305
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF 198
E + + W A+I + G+ ++L LF +M S +P+E TF
Sbjct: 306 ETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITF 347
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 230/416 (55%), Gaps = 14/416 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y ++L C L+EG ++H + K ++ +R+ L+ LY +C + +AR FD M
Sbjct: 116 YGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMK 175
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQ 208
ER++VSW AMI Y+ A + +LF ML G +P+ FTF ++ + +
Sbjct: 176 ERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSE 235
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG- 267
+H L IK + + SL++ Y K G + A + E +RD++SCTA+I+G++Q
Sbjct: 236 LHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNN 295
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY-VVLQ 326
+A D+F+ + + + V +S+L + +AS+ G+Q+H L+S + V L
Sbjct: 296 CTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALG 355
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
NSLIDMY+K G + + F+ M+E+ V SW +++ GYG+HG + ++L+ M E +
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE-RI 414
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
KP+ VT L++LS CSH G + G I YD K G+E ++EH C++D+L R+G +EEA
Sbjct: 415 KPNDVTFLSLLSACSHTGQTELGWKI-YDTMINKHGIEAREEHLSCIIDMLARSGYLEEA 473
Query: 447 FEFI--KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS 500
+ I K+ +++ WG+ L AC H NV + +LL +E NY L+
Sbjct: 474 YALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLA 529
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 107/380 (28%), Positives = 194/380 (51%), Gaps = 14/380 (3%)
Query: 116 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGY 175
+H + I + ++ L+ LI LY K ++ AR +FD + +R+VVSWTAMIS +S+ GY
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 176 ASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSS 227
AL LF +M R + N+FT+ +V G QIH + K N ++ V S+
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSA 153
Query: 228 LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSN 287
LL +YA+ GK+ EAR F+ + ERD+VS A+I GY + + LF+ + EG + +
Sbjct: 154 LLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPD 213
Query: 288 YVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
T+ S+L A + L+ ++H ++ L SL++ Y KCG+L + ++ +
Sbjct: 214 CFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHE 273
Query: 348 TMQERTVMSWNAMLVGYGKHGE-GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLE 406
++R ++S A++ G+ + + ++F M + K D V + ++L C+
Sbjct: 274 GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRM-KTKMDEVVVSSMLKICTTIASV 332
Query: 407 DRGLDIF-YDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSL 465
G I + + S +I + + ++D+ ++G +E+A ++M E W SL
Sbjct: 333 TIGRQIHGFALKSSQIRFDVALGN--SLIDMYAKSGEIEDAVLAFEEMK-EKDVRSWTSL 389
Query: 466 LGACSVHSNVDIGVFVGHRL 485
+ H N + + + +R+
Sbjct: 390 IAGYGRHGNFEKAIDLYNRM 409
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 251 bits (642), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 231/413 (55%), Gaps = 15/413 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ L+ C ++ G ++H M+K S F T L+ Y KC + +AR VF+ +
Sbjct: 145 FMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL 204
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEF-----TFATVXSML----GR 207
+R++V W A++S+Y G +A L M G++ N F TF+++ S G+
Sbjct: 205 DRDLVLWNALVSSYVLNGMIDEAFGLLKLM---GSDKNRFRGDYFTFSSLLSACRIEQGK 261
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
QIH+++ K +Y + V ++LL+MYAK + +AR FE + R+VVS A+I G+AQ G
Sbjct: 262 QIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNG 321
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
EA+ LF Q+ E +Q + +T+ASVL++ + +++ KQV V + ++ + N
Sbjct: 322 EGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVAN 381
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
SLI YS+ GNL+ + F +++E ++SW +++ HG E L++F M + +++
Sbjct: 382 SLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQ--KLQ 439
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
PD +T L VLS CSHGGL GL F MT +E + EHY C++DLLGRAG ++EA
Sbjct: 440 PDKITFLEVLSACSHGGLVQEGLRCFKRMTEF-YKIEAEDEHYTCLIDLLGRAGFIDEAS 498
Query: 448 EFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS 500
+ + MP EP+ + G C++H + + +LLEIE NY LS
Sbjct: 499 DVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILS 551
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/383 (28%), Positives = 192/383 (50%), Gaps = 33/383 (8%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
L + ++ H M+K S+FL+ +L+ YTK DA +FDEMP RN+V+W +I
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 170 YSQRG-----YASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKS 216
QR A ++L + + +F + + G Q+H L++K
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQ 171
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
++ + +SL+ Y K G I EAR +FE + +RD+V A++S Y G+ +EA L
Sbjct: 172 GLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLL 231
Query: 277 RQLRGEG--MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYS 334
+ + + + +Y T++S+L+A ++ GKQ+H + + + + +L++MY+
Sbjct: 232 KLMGSDKNRFRGDYFTFSSLLSA----CRIEQGKQIHAILFKVSYQFDIPVATALLNMYA 287
Query: 335 KCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTML 394
K +L+ +R F++M R V+SWNAM+VG+ ++GEGRE + LF M EN ++PD +T
Sbjct: 288 KSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLEN-LQPDELTFA 346
Query: 395 AVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEH-----YGCVVDLLGRAGRVEEAFEF 449
+VLS C+ +++ + V K ++ R G + EA
Sbjct: 347 SVLSSCAK-------FSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 450 IKKMPFEPTAAIWGSLLGACSVH 472
+ EP W S++GA + H
Sbjct: 400 FHSIR-EPDLVSWTSVIGALASH 421
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 146/283 (51%), Gaps = 27/283 (9%)
Query: 85 MALCGHDM-KFKG----YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLY 139
+ L G D +F+G +++LL+ C + +G+++HA + K Y + + T L+ +Y
Sbjct: 231 LKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMY 286
Query: 140 TKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
K + L DAR F+ M RNVVSW AMI ++Q G +A+ LF QML +P+E TFA
Sbjct: 287 AKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFA 346
Query: 200 TVXSMLG--------RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
+V S +Q+ +++ K + V +SL+ Y+++G + EA F + E
Sbjct: 347 SVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREP 406
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG---- 307
D+VS T++I A G EE+L +F + + +Q + +T+ VL+A S + G
Sbjct: 407 DLVSWTSVIGALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCF 465
Query: 308 -KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM 349
+ + + +E Y LID+ + G + + + ++M
Sbjct: 466 KRMTEFYKIEAEDEHYTC----LIDLLGRAGFIDEASDVLNSM 504
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 251 bits (641), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/350 (38%), Positives = 199/350 (56%), Gaps = 11/350 (3%)
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
G H L +K + + VY+GSSL+ +Y G++ A +FE +PER+VVS TA+ISG+AQ
Sbjct: 139 GSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQ 198
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
+ L L+ ++R N T+ ++L+A +G +L G+ VH L + SY+ +
Sbjct: 199 EWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHI 258
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
NSLI MY KCG+L + RIFD + V+SWN+M+ GY +HG + +ELF LM ++
Sbjct: 259 SNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSG 318
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
KPD +T L VLS C H GL G F M + G++P+ HY C+VDLLGR G ++E
Sbjct: 319 TKPDAITYLGVLSSCRHAGLVKEGRKFFNLMA--EHGLKPELNHYSCLVDLLGRFGLLQE 376
Query: 446 AFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS----- 500
A E I+ MP +P + IWGSLL +C VH +V G+ L +E A + L+
Sbjct: 377 ALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYAS 436
Query: 501 ----XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEV 546
+ ++R +M K + PG S IE++ + F A D S+ R E+
Sbjct: 437 VGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEI 486
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 151/288 (52%), Gaps = 18/288 (6%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
G ++ + C R R G H +K ++ V+L + L+VLY + +A VF+EM
Sbjct: 122 GLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEM 181
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GR 207
PERNVVSWTAMIS ++Q L L+ +M +S ++PN++TF + S GR
Sbjct: 182 PERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGR 241
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
+H + +++++ +SL+ MY K G + +A IF+ +DVVS ++I+GYAQ G
Sbjct: 242 SVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHG 301
Query: 268 LDEEALDLFR-QLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN----HVLRSEVPSY 322
L +A++LF + G + + +TY VL++ + G++ N H L+ E+ Y
Sbjct: 302 LAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY 361
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQER-TVMSWNAMLVGYGKHGE 369
+ L+D+ + G L + + + M + + W ++L HG+
Sbjct: 362 ----SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGD 405
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 155/486 (31%), Positives = 251/486 (51%), Gaps = 57/486 (11%)
Query: 136 IVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNE 195
+V + D +R+A VFDE+PE +V+S TA+I + + +A F ++L G PNE
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 196 FTFATVXS--------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEAR----- 242
FTF TV LG+Q+H +K ++V+VGS++L+ Y K + +AR
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 243 --------------------------GIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
+F +PER VV+ A+I G++Q G +EEA++ F
Sbjct: 154 TRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTF 213
Query: 277 RQLRGEGMQ-SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY-VVLQNSLIDMYS 334
+ EG+ N T+ +TA+S +AS GK +H ++ + V + NSLI YS
Sbjct: 214 VDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYS 273
Query: 335 KCGNLTYSRRIFDTMQE--RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVT 392
KCGN+ S F+ ++E R ++SWN+M+ GY +G G E + +F M ++ ++P+ VT
Sbjct: 274 KCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVT 333
Query: 393 MLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEP---KKEHYGCVVDLLGRAGRVEEAFEF 449
+L VL C+H GL G F + +P + EHY C+VD+L R+GR +EA E
Sbjct: 334 ILGVLFACNHAGLIQEGYMYFNKAVNDYD--DPNLLELEHYACMVDMLSRSGRFKEAEEL 391
Query: 450 IKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDVRSL--- 506
IK MP +P W +LLG C +HSN + ++LE++ + +Y LS ++
Sbjct: 392 IKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENW 451
Query: 507 RDMMLKKAVMKEPGRSR------IELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEA 560
+++ L + MKE G R IE+ + F +D+++ ++EVY + +S +E
Sbjct: 452 QNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQHLEEN 511
Query: 561 GYVPDL 566
DL
Sbjct: 512 ECWKDL 517
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 151/323 (46%), Gaps = 48/323 (14%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE-- 154
+ ++ + R ++ G+++H + +K +VF+ + ++ Y K +L DAR FD+
Sbjct: 96 FGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTR 155
Query: 155 -----------------------------MPERNVVSWTAMISAYSQRGYASQALNLFVQ 185
MPER+VV+W A+I +SQ G +A+N FV
Sbjct: 156 DPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 186 MLRSGTE-PNEFTFATVXSML--------GRQIHSLIIKS-NYDAHVYVGSSLLDMYAKD 235
MLR G PNE TF + + G+ IH+ IK +V+V +SL+ Y+K
Sbjct: 216 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 275
Query: 236 GKIHEARGIFECLPE--RDVVSCTAIISGYAQLGLDEEALDLFRQL-RGEGMQSNYVTYA 292
G + ++ F L E R++VS ++I GYA G EEA+ +F ++ + ++ N VT
Sbjct: 276 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTIL 335
Query: 293 SVLTALSGLASLDHGKQVHNHVLRS-EVPSYVVLQN--SLIDMYSKCGNLTYSRRIFDTM 349
VL A + + G N + + P+ + L++ ++DM S+ G + + +M
Sbjct: 336 GVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Query: 350 Q-ERTVMSWNAMLVGYGKHGEGR 371
+ + W A+L G H R
Sbjct: 396 PLDPGIGFWKALLGGCQIHSNKR 418
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/549 (27%), Positives = 268/549 (48%), Gaps = 93/549 (16%)
Query: 117 HAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYA 176
H +I+ ++ + L+ LY K + DA ++F EMP RN +SW MI +SQ
Sbjct: 181 HTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDC 240
Query: 177 SQALNLFVQMLRSGTEPNEFTFATVXSM-------------------------------- 204
A+ +F M R +P+E T+ +V S
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVF 300
Query: 205 -----------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE------- 246
+ ++H +IK ++ ++ ++L+ +Y K GK+ +A +F
Sbjct: 301 FSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI 360
Query: 247 --------------------------------CLPERDVVSCTAIISGYAQLGLDEEALD 274
C + +VV+ T++I G G +++L+
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 275 LFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYS 334
FRQ++ + +N VT +L+ + L +L+ G+++H HV+R+ + +++QN+L++MY+
Sbjct: 421 YFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYA 480
Query: 335 KCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTML 394
KCG L+ +F+ ++++ ++SWN+++ GYG HG + L +F M PDG+ ++
Sbjct: 481 KCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSG-FHPDGIALV 539
Query: 395 AVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP 454
AVLS CSH GL ++G +IFY M S + G+EP++EHY C+VDLLGR G ++EA E +K MP
Sbjct: 540 AVLSACSHAGLVEKGREIFYSM-SKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Query: 455 FEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRS 505
EP + G+LL +C +H NVDI + +L +E G+Y LS + +
Sbjct: 599 MEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESAN 658
Query: 506 LRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPD 565
+R + KK + K G S IE+ + + F + E +Y +++L + G D
Sbjct: 659 VRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHMLKKGPTHD 718
Query: 566 LSCVLHDVD 574
+ D+D
Sbjct: 719 GNNYEDDLD 727
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 176/378 (46%), Gaps = 53/378 (14%)
Query: 94 FKGYNALLNECVSKRALREGQRVHAHMIKTRYL-PSVFLRTRLIVLYTKCDSLRDARHVF 152
F ++ LL C++ + R+ VHA ++ + ++ S L LI +Y + L DAR+VF
Sbjct: 56 FHYFDHLLGLCLTAQQCRQ---VHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVF 112
Query: 153 DEMPE---RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM----- 204
+ + ++ W +++ A G AL L+ M + G + + +
Sbjct: 113 ETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLG 172
Query: 205 ---LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIIS 261
L R H+ +I+ +++V + LL +Y K G++ +A +F +P R+ +S +I
Sbjct: 173 RFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIK 232
Query: 262 GYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT-----------------------AL 298
G++Q E A+ +F ++ E + + VT+ SVL+ A+
Sbjct: 233 GFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAV 292
Query: 299 SG------------LASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
SG L +L ++VH +V++ Y+ +N+LI +Y K G + + +F
Sbjct: 293 SGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLF 352
Query: 347 DTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN---EVKPDGVTMLAVLSGCSHG 403
++ + + SWN+++ + G+ E L LF+ + E N VK + VT +V+ GC+
Sbjct: 353 RQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQ 412
Query: 404 GLEDRGLDIFYDMTSGKI 421
G D L+ F M K+
Sbjct: 413 GRGDDSLEYFRQMQFSKV 430
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 83/159 (52%), Gaps = 9/159 (5%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L+ C AL G+ +H H+I+T ++ ++ L+ +Y KC L + VF+ + +++
Sbjct: 440 ILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKD 499
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQI-H 210
++SW ++I Y G+A +AL++F +M+ SG P+ V S GR+I +
Sbjct: 500 LISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFY 559
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
S+ + + + ++D+ + G + EA I + +P
Sbjct: 560 SMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 153/430 (35%), Positives = 235/430 (54%), Gaps = 33/430 (7%)
Query: 150 HVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA----TVXSML 205
H D P +W + YS +++ ++ +M R G +PN+ TF S L
Sbjct: 72 HSSDSTPS----TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFL 127
Query: 206 G----RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIIS 261
G RQI ++K +D VYVG++L+ +Y K +AR +F+ + ER+VVS +I++
Sbjct: 128 GLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMT 187
Query: 262 GYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPS 321
+ G + F ++ G+ + T +L+A G SL GK VH+ V+ E+
Sbjct: 188 ALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELEL 245
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMR 381
L +L+DMY+K G L Y+R +F+ M ++ V +W+AM+VG ++G E L+LF+ M
Sbjct: 246 NCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMM 305
Query: 382 EENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI-GVEPKKEHYGCVVDLLGRA 440
+E+ V+P+ VT L VL CSH GL D G F++M KI ++P HYG +VD+LGRA
Sbjct: 306 KESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEME--KIHKIKPMMIHYGAMVDILGRA 363
Query: 441 GRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVD---IGVFVGHRLLEIETGNAGNYF 497
GR+ EA++FIKKMPFEP A +W +LL ACS+H + D IG V RL+E+E +GN
Sbjct: 364 GRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLV 423
Query: 498 FLS---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYI 548
++ + +R +M + + K G S +EL H F + PR E Y+
Sbjct: 424 IVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG--YDPRSE--YV 479
Query: 549 KVKELSVRFK 558
+ EL FK
Sbjct: 480 SIYELLDLFK 489
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 141/277 (50%), Gaps = 9/277 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
LL C S L G+++ ++K + V++ LI LY C DAR VFDEM ERN
Sbjct: 119 LLKACASFLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERN 178
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM------LGRQIHSLI 213
VVSW ++++A + G + F +M+ P+E T + S LG+ +HS +
Sbjct: 179 VVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQV 238
Query: 214 IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEAL 273
+ + + +G++L+DMYAK G + AR +FE + +++V + +A+I G AQ G EEAL
Sbjct: 239 MVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEAL 298
Query: 274 DLFRQLRGE-GMQSNYVTYASVLTALSGLASLDHG-KQVHNHVLRSEVPSYVVLQNSLID 331
LF ++ E ++ NYVT+ VL A S +D G K H ++ ++ +++D
Sbjct: 299 QLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVD 358
Query: 332 MYSKCGNLTYSRRIFDTMQ-ERTVMSWNAMLVGYGKH 367
+ + G L + M E + W +L H
Sbjct: 359 ILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 158/501 (31%), Positives = 249/501 (49%), Gaps = 83/501 (16%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+++ C + + + + + IK + VF+ T L+ +Y C L+DAR +FDEMPERN
Sbjct: 179 VISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERN 238
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQ-------------------------------MLR 188
+V+W M++ YS+ G QA LF Q MLR
Sbjct: 239 LVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLR 298
Query: 189 SGTEPNEFTFA--------TVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYA------- 233
G +P+E +V S G Q+H I+K +D + ++ ++++ YA
Sbjct: 299 CGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKL 358
Query: 234 ------------------------KDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
K+G + +AR +F+ ++D+ S A+ISGYAQ
Sbjct: 359 ALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSP 418
Query: 270 EEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+ AL LFR++ ++ + +T SV +A+S L SL+ GK+ H+++ S +P L +
Sbjct: 419 QLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAA 478
Query: 329 LIDMYSKCGNLTYSRRIF---DTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
+IDMY+KCG++ + IF + T+ WNA++ G HG + L+L++ + +
Sbjct: 479 IIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDL-QSLP 537
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
+KP+ +T + VLS C H GL + G F M S G+EP +HYGC+VDLLG+AGR+EE
Sbjct: 538 IKPNSITFVGVLSACCHAGLVELGKTYFESMKSDH-GIEPDIKHYGCMVDLLGKAGRLEE 596
Query: 446 AFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---XD 502
A E IKKMP + IWG LL A H NV+I L I+ + G LS D
Sbjct: 597 AKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYAD 656
Query: 503 VRSLRDMMLKKAVMKEPGRSR 523
D+ A+++E R+R
Sbjct: 657 AGRWEDV----ALVREEMRTR 673
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 120/485 (24%), Positives = 204/485 (42%), Gaps = 111/485 (22%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHV--------- 151
L C S + G+++H ++K+ + ++ ++ +Y KC L DA V
Sbjct: 48 LGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDS 107
Query: 152 ----------------------FDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRS 189
FD MPER+ VS+T +I Y+Q S+A+ LF +M
Sbjct: 108 ASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNL 167
Query: 190 GTEPNEFTFATVXSM---LG-----RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEA 241
G NE T ATV S LG R + SL IK + V+V ++LL MY + +A
Sbjct: 168 GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 242 RGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE------------------- 282
R +F+ +PER++V+ +++GY++ GL E+A +LF Q+ +
Sbjct: 228 RKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLD 287
Query: 283 ------------GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ---- 326
GM+ + V +L+A + G Q+H +++ Y LQ
Sbjct: 288 EALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATII 347
Query: 327 ---------------------------NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNA 359
N+LI + K G + +R +FD ++ + SWNA
Sbjct: 348 HFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNA 407
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH-GGLED--RGLDIFYDM 416
M+ GY + + L LF M ++VKPD +TM++V S S G LE+ R D
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS 467
Query: 417 TSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAI--WGSLLGACSVHSN 474
T + P ++D+ + G +E A + ++ I W +++ + H +
Sbjct: 468 T-----IPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGH 522
Query: 475 VDIGV 479
+ +
Sbjct: 523 AKLAL 527
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 48/300 (16%)
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYA 233
G +S V L S N+ T GRQIH ++KS D++ Y+ +S+L+MYA
Sbjct: 35 GESSDTERALVSALGSCASSNDVT-------CGRQIHCRVLKSGLDSNGYICNSVLNMYA 87
Query: 234 K--------------------------DG-----KIHEARGIFECLPERDVVSCTAIISG 262
K DG ++ +A +F+ +PER VS T +I G
Sbjct: 88 KCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKG 147
Query: 263 YAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY 322
YAQ EA++LFR++R G+ N VT A+V++A S L + + + + ++ ++
Sbjct: 148 YAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGR 207
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
V + +L+ MY C L +R++FD M ER +++WN ML GY K G + ELF + E
Sbjct: 208 VFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE 267
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR 442
+ D V+ ++ GC D L + +M + G++P + +VDLL + R
Sbjct: 268 K-----DIVSWGTMIDGCLRKNQLDEALVYYTEML--RCGMKPSEVM---MVDLLSASAR 317
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 242/493 (49%), Gaps = 82/493 (16%)
Query: 139 YTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFT 197
Y K + DAR +FD M ERNV++WTAMI Y + G+ LF++M + G + N T
Sbjct: 218 YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNT 277
Query: 198 FATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
A + G QIH L+ + + +++G+SL+ MY+K G + EA+ +F +
Sbjct: 278 LAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK 337
Query: 250 ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS----------------------- 286
+D VS ++I+G Q EA +LF ++ G+ M S
Sbjct: 338 NKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGM 397
Query: 287 ----NYVTYASVLTA--------------------------------LSGLASLD---HG 307
+ +T+ ++++A LS ASL G
Sbjct: 398 MPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEG 457
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKH 367
Q+H V++ + + + +QNSL+ MY KCGN + +IF + E ++S+N M+ GY +
Sbjct: 458 LQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYN 517
Query: 368 GEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKK 427
G G++ L+LF+++ E + +P+GVT LA+LS C H G D G F M S +EP
Sbjct: 518 GFGKKALKLFSML-ESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS-YNIEPGP 575
Query: 428 EHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
+HY C+VDLLGR+G +++A I MP +P + +WGSLL A H VD+ +L+E
Sbjct: 576 DHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIE 635
Query: 488 IETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDR 538
+E +A Y LS D + ++ K + K+PG S I L +H F A D
Sbjct: 636 LEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDE 695
Query: 539 SHPRREEVYIKVK 551
S EE+ +K
Sbjct: 696 SQLNLEEIGFTLK 708
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 182/370 (49%), Gaps = 34/370 (9%)
Query: 137 VLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEF 196
++ KCD L A +F ++PE+N VS+ MI+ + + G +A L+ + P +F
Sbjct: 122 MIKNKCD-LGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE------TPVKF 174
Query: 197 TFATVXSML-------GRQIHSL-IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL 248
+ ++L G+ ++ + + V SS++ Y K G+I +AR +F+ +
Sbjct: 175 RDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRM 234
Query: 249 PERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG-MQSNYVTYASVLTALSGLASLDHG 307
ER+V++ TA+I GY + G E+ LF ++R EG ++ N T A + A G
Sbjct: 235 TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREG 294
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKH 367
Q+H V R + + L NSL+ MYSK G + ++ +F M+ + +SWN+++ G +
Sbjct: 295 SQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQR 354
Query: 368 GEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKK 427
+ E ELF M + D V+ ++ G S G + +++F G+ P+K
Sbjct: 355 KQISEAYELFEKMPGK-----DMVSWTDMIKGFSGKGEISKCVELF--------GMMPEK 401
Query: 428 EH--YGCVVDLLGRAGRVEEAFEFIKKMPFE---PTAAIWGSLLGACSVHSNVDIGVFVG 482
++ + ++ G EEA + KM + P + + S+L A + +++ G+ +
Sbjct: 402 DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIH 461
Query: 483 HRLLEIETGN 492
R++++ N
Sbjct: 462 GRVVKMNIVN 471
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
Q+ + T ++F I + + +L++A +F +M R++VSW AMISAY++
Sbjct: 35 QKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAEN 94
Query: 174 GYASQALNLFVQM-LRSGTEPNEFTFATVXSM--LGRQIHSLIIKSNYDAHVYVGSSLLD 230
G S+A +F +M +R T N A + + LG+ +A Y ++++
Sbjct: 95 GKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVSY--ATMIT 152
Query: 231 MYAKDGKIHEARGIFECLPE--RDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNY 288
+ + G+ EA ++ P RD V+ ++SGY + G EA+ +F +GM
Sbjct: 153 GFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVF-----QGMAVKE 207
Query: 289 VTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
V S S+ HG Y K G + +R +FD
Sbjct: 208 VVSCS---------SMVHG-------------------------YCKMGRIVDARSLFDR 233
Query: 349 MQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
M ER V++W AM+ GY K G + LF MR+E +VK + T+ + C
Sbjct: 234 MTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKAC 285
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 14/178 (7%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
+LQ +C + F +++L+ S L EG ++H ++K + + ++ L+ +Y K
Sbjct: 429 MLQKEVCPNSYTF---SSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCK 485
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
C + DA +F + E N+VS+ MIS YS G+ +AL LF + SG EPN TF +
Sbjct: 486 CGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLAL 545
Query: 202 XSM--------LGRQIHSLIIKSNYDAHVYVG--SSLLDMYAKDGKIHEARGIFECLP 249
S LG + +KS+Y+ + ++D+ + G + +A + +P
Sbjct: 546 LSACVHVGYVDLGWKYFK-SMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMP 602
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 134/436 (30%), Positives = 234/436 (53%), Gaps = 31/436 (7%)
Query: 148 ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE---PNEFTF------ 198
A +FD + N + MI S+ L F+ M++ E P+ TF
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVA 125
Query: 199 --ATVXSMLGRQIHSLIIKSNY---DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
+G+QIH ++K+ D HV G +L +Y +D + +AR +F+ +P+ DV
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDGHVQTG--VLRIYVEDKLLFDARKVFDEIPQPDV 183
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
V +++GY + GL E L++F+++ G++ + + + LTA + + +L GK +H
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEF 243
Query: 314 VLRSE-VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
V + + S V + +L+DMY+KCG + + +F+ + R V SW A++ GY +G ++
Sbjct: 244 VKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKK 303
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
+ E+ +KPD V +L VL+ C+HGG + G + +M + + G+ PK EHY C
Sbjct: 304 ATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA-RYGITPKHEHYSC 362
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
+VDL+ RAGR+++A + I+KMP +P A++WG+LL C H NV++G LL++E GN
Sbjct: 363 IVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGN 422
Query: 493 A----------GNYFF---LSXDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRS 539
N +F + + +R M+ ++ + K PG S +E+D ++ F + D S
Sbjct: 423 VEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVS 482
Query: 540 HPRREEVYIKVKELSV 555
HP +++ + LSV
Sbjct: 483 HPNLLQIHTLIHLLSV 498
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 147/284 (51%), Gaps = 13/284 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTR-YLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
++ L+ C+ G+++H ++K +L ++T ++ +Y + L DAR VFDE+
Sbjct: 119 FHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEI 178
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GR 207
P+ +VV W +++ Y + G S+ L +F +ML G EP+EF+ T + G+
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGK 238
Query: 208 QIHSLIIKSNY-DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
IH + K + ++ V+VG++L+DMYAK G I A +FE L R+V S A+I GYA
Sbjct: 239 WIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAY 298
Query: 267 GLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGK-QVHNHVLRSEVPSYVV 324
G ++A ++ R +G++ + V VL A + L+ G+ + N R +
Sbjct: 299 GYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHE 358
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS-WNAMLVGYGKH 367
+ ++D+ + G L + + + M + + S W A+L G H
Sbjct: 359 HYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 245 bits (625), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 136/436 (31%), Positives = 234/436 (53%), Gaps = 31/436 (7%)
Query: 148 ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE---PNEFTF------ 198
A +FD + N + MI S+ L F+ M++ E P+ TF
Sbjct: 66 ASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVA 125
Query: 199 --ATVXSMLGRQIHSLIIKSNY---DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
+G+QIH ++K+ D+HV G +L +Y +D + +AR +F+ +P+ DV
Sbjct: 126 CLKACFFSVGKQIHCWVVKNGVFLSDSHVQTG--VLRIYVEDKLLLDARKVFDEIPQPDV 183
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
V +++GY + GL E L++FR++ +G++ + + + LTA + + +L GK +H
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEF 243
Query: 314 VLR-SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
V + S + S V + +L+DMY+KCG + + +F + R V SW A++ GY +G ++
Sbjct: 244 VKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKK 303
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
+ + E+ +KPD V +L VL+ C+HGG + G + +M + + + PK EHY C
Sbjct: 304 AMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA-RYEITPKHEHYSC 362
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
+VDL+ RAGR+++A I+KMP +P A++WG+LL C H NV++G LL++E GN
Sbjct: 363 IVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGN 422
Query: 493 A----------GNYFF---LSXDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRS 539
N +F + + +R M+ ++ V K PG S +E+D + F + D S
Sbjct: 423 VEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVS 482
Query: 540 HPRREEVYIKVKELSV 555
HP +++ + LSV
Sbjct: 483 HPNLLQIHTVIHLLSV 498
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 150/284 (52%), Gaps = 13/284 (4%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTR-YLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
++ L+ C+ G+++H ++K +L ++T ++ +Y + L DAR VFDE+
Sbjct: 119 FHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEI 178
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GR 207
P+ +VV W +++ Y + G S+ L +F +ML G EP+EF+ T + G+
Sbjct: 179 PQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGK 238
Query: 208 QIHSLIIKSNY-DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
IH + K ++ ++ V+VG++L+DMYAK G I A +F+ L R+V S A+I GYA
Sbjct: 239 WIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAY 298
Query: 267 GLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQ-VHNHVLRSEVPSYVV 324
G ++A+ +L R +G++ + V VL A + L+ G+ + N R E+
Sbjct: 299 GYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHE 358
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS-WNAMLVGYGKH 367
+ ++D+ + G L + + + M + + S W A+L G H
Sbjct: 359 HYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 154/517 (29%), Positives = 263/517 (50%), Gaps = 62/517 (11%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYL-PSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
++L C L G+ +H+++++ YL + LI Y + A F M
Sbjct: 335 SILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMST 394
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG----------- 206
++++SW A++ A++ + + + E T+ S+L
Sbjct: 395 KDIISWNAILDAFAD---SPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKV 451
Query: 207 RQIHSLIIKSNY---DAHVYVGSSLLDMYAKDGKIHEARGIFECLPER-DVVSCTAIISG 262
+++H +K+ + +G++LLD YAK G + A IF L ER +VS +++SG
Sbjct: 452 KEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG 511
Query: 263 Y--------AQLGLDE-----------------------EALDLFRQLRGEGMQSNYVTY 291
Y AQ+ E EA+ +FR+++ GM+ N VT
Sbjct: 512 YVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTI 571
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE 351
++L + LASL +Q H +++R + + L+ +L+D+Y+KCG+L ++ +F +
Sbjct: 572 MNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAKCGSLKHAYSVFQSDAR 630
Query: 352 RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLD 411
R ++ + AM+ GY HG G+E L +++ M E N +KPD V + +L+ C H GL GL
Sbjct: 631 RDLVMFTAMVAGYAVHGRGKEALMIYSHMTESN-IKPDHVFITTMLTACCHAGLIQDGLQ 689
Query: 412 IFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSV 471
I YD G++P E Y C VDL+ R GR+++A+ F+ +MP EP A IWG+LL AC+
Sbjct: 690 I-YDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTT 748
Query: 472 HSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRS 522
++ +D+G V + LL+ E+ + GN+ +S V LR++M KK + K G S
Sbjct: 749 YNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCS 808
Query: 523 RIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKE 559
+E+D + F + D SHPRR+ ++ V L ++ KE
Sbjct: 809 WLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 169/338 (50%), Gaps = 31/338 (9%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
++ C S L G+ +H + K ++ + ++ +Y KC + D + +F +M +
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLD 86
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQM-LRSGTEPNEFTFATVXSML--------GRQIH 210
V W +++ S + + F M +P+ TFA V + G+ +H
Sbjct: 87 PVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMH 145
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIH-EARGIFECLPERDVVSCTAIISGYAQLGLD 269
S IIK+ + VG++L+ MYAK G I +A F+ + ++DVVS AII+G+++ +
Sbjct: 146 SYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMM 205
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH------GKQVHNHVL-RSEVPSY 322
+A F + E + NY T A+VL AS+D G+Q+H++V+ RS + ++
Sbjct: 206 ADAFRSFCLMLKEPTEPNYATIANVLPVC---ASMDKNIACRSGRQIHSYVVQRSWLQTH 262
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
V + NSL+ Y + G + + +F M + ++SWN ++ GY + E + +LF +
Sbjct: 263 VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGK 420
+ +V PD VT++++L C+ D+ SGK
Sbjct: 323 KGDVSPDSVTIISILPVCAQ----------LTDLASGK 350
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 149/290 (51%), Gaps = 21/290 (7%)
Query: 109 ALREGQRVHAHMIKTRYLPS-VFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMI 167
A R G+++H+++++ +L + VF+ L+ Y + + +A +F M +++VSW +I
Sbjct: 242 ACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVI 301
Query: 168 SAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXSML--------GRQIHSLIIKSNY 218
+ Y+ +A LF ++ G P+ T ++ + G++IHS I++ +Y
Sbjct: 302 AGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSY 361
Query: 219 DAH-VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFR 277
VG++L+ YA+ G A F + +D++S AI+ +A + L+L
Sbjct: 362 LLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLH 421
Query: 278 QLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS------EVPSYVVLQNSLID 331
L E + + VT S+L + + K+VH + +++ E P L N+L+D
Sbjct: 422 HLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPK---LGNALLD 478
Query: 332 MYSKCGNLTYSRRIFDTMQE-RTVMSWNAMLVGYGKHGEGREVLELFTLM 380
Y+KCGN+ Y+ +IF + E RT++S+N++L GY G + LFT M
Sbjct: 479 AYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEM 528
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 157/362 (43%), Gaps = 66/362 (18%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
NALL+ + ++ + + R L S L+ Y S DA+ +F EM
Sbjct: 474 NALLDAYAKCGNVEYAHKIFLGLSERRTLVSY---NSLLSGYVNSGSHDDAQMLFTEMST 530
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF-------ATVXSM-LGRQI 209
++ +W+ M+ Y++ ++A+ +F ++ G PN T A + S+ L RQ
Sbjct: 531 TDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQC 590
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
H II+ + + +LLD+YAK G + A +F+ RD+V TA+++GYA G
Sbjct: 591 HGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRG 649
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN-----HVLRSEVPSYVV 324
+EAL ++ + ++ ++V ++LTA + G Q+++ H ++ + Y
Sbjct: 650 KEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYAC 709
Query: 325 LQNSLIDMYSKCGNL--TYS----------RRIFDTMQERTVMSWNAMLVG--------- 363
+D+ ++ G L YS I+ T+ R ++N M +G
Sbjct: 710 ----AVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLL-RACTTYNRMDLGHSVANHLLQ 764
Query: 364 ---------------YGKHGEGREVLELFTLMREENEVKPDGVTMLAV-------LSG-C 400
Y + V+EL LM+++ KP G + L V +SG C
Sbjct: 765 AESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDC 824
Query: 401 SH 402
SH
Sbjct: 825 SH 826
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 225/409 (55%), Gaps = 38/409 (9%)
Query: 104 CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSW 163
CV R + G+ +H+ IK V + + LI +Y KC + AR VFDEMPERNV +W
Sbjct: 57 CVVPRVVL-GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATW 115
Query: 164 TAMISAYSQRGYASQALNLF------------------------VQMLRSGTEPNEFTFA 199
AMI Y G A A LF ++ R E F
Sbjct: 116 NAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELK 175
Query: 200 TVXS---MLGRQIHSLIIKSNY-------DAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
V + MLG +++ ++ + + +V S ++ Y + G +HEAR IF +
Sbjct: 176 NVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVF 235
Query: 250 ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQ 309
RD+V +I+GYAQ G ++A+D F ++GEG + + VT +S+L+A + LD G++
Sbjct: 236 ARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGRE 295
Query: 310 VHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE 369
VH+ + + + N+LIDMY+KCG+L + +F+++ R+V N+M+ HG+
Sbjct: 296 VHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGK 355
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEH 429
G+E LE+F+ M E ++KPD +T +AVL+ C HGG GL IF +M + V+P +H
Sbjct: 356 GKEALEMFSTM-ESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQD--VKPNVKH 412
Query: 430 YGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIG 478
+GC++ LLGR+G+++EA+ +K+M +P + G+LLGAC VH + ++
Sbjct: 413 FGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMA 461
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 242 bits (618), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/416 (34%), Positives = 230/416 (55%), Gaps = 22/416 (5%)
Query: 128 SVFLRTRLIVLYTKCDSL-RDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM 186
+V L ++L++ Y+K + L + VF MP RN+ SW +I +S+ G+AS++++LF++M
Sbjct: 65 NVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 187 LR-SGTEPNEFTF--------ATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGK 237
R S P++FT A+ + G IH L +K + + ++V S+L+ MY GK
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 238 IHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA 297
+ AR +F+ +P RD V TA+ GY Q G L +FR++ G + V S+L A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 298 LSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSW 357
L +L HGK VH +R + L N++ DMY KC L Y+ +F M R V+SW
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISW 304
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMT 417
+++++GYG G+ +LF M +E ++P+ VT L VLS C+HGGL ++ F M
Sbjct: 305 SSLILGYGLDGDVVMSFKLFDEMLKEG-IEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ 363
Query: 418 SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDI 477
+ + P+ +HY V D + RAG +EEA +F++ MP +P A+ G++L C V+ NV++
Sbjct: 364 --EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEV 421
Query: 478 GVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSRI 524
G V L++++ A Y L+ + SLR M +K + K PG S I
Sbjct: 422 GERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 236/478 (49%), Gaps = 46/478 (9%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L C ++ G ++H + KT +FL+ LI LY KC L +R +FD MP+R+
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQM---LRSGTEPNEFTFATVXSMLGRQIHSLIIKS 216
VS+ +MI Y + G A LF M +++ N + G I S +
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 246
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
+ + +S++D Y K G+I +A+G+F+ +P RDVV+ +I GYA+LG A LF
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 277 RQL------RGEGMQSNYV--------------------------TYASVLTALSGLASL 304
Q+ M + YV T VL A++ L L
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 305 DHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGY 364
+H +++ + L +LIDMYSKCG++ ++ +F+ ++ +++ WNAM+ G
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGL 426
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVE 424
HG G ++ L E +KPD +T + VL+ CSH GL GL + +++ K +E
Sbjct: 427 AIHGLGESAFDML-LQIERLSLKPDDITFVGVLNACSHSGLVKEGL-LCFELMRRKHKIE 484
Query: 425 PKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHR 484
P+ +HYGC+VD+L R+G +E A I++MP EP IW + L ACS H + G V
Sbjct: 485 PRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKH 544
Query: 485 LLEIETGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSRIELDQVLHTF 533
L+ N +Y LS DVR +R MM ++ + K PG S IELD +H F
Sbjct: 545 LILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 201/432 (46%), Gaps = 73/432 (16%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLY--TKCDSLRD-ARHVFDEM--------PERNVVS 162
++H +IKT + + L TR+++ + ++ L D AR VF E +
Sbjct: 29 NQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPFL 88
Query: 163 WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR--------QIHSLII 214
W A+I ++S QAL L ML +G ++F+ + V R QIH +
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 215 KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALD 274
K+ + +++ + L+ +Y K G + +R +F+ +P+RD VS ++I GY + GL A +
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 275 LF--------------RQLRGEGMQSNYVTYASVLTA-------LSGLASLD----HGKQ 309
LF + G S+ V AS L A +S + +D HG+
Sbjct: 209 LFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRI 268
Query: 310 VHNHVLRSEVPSY-VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHG 368
L +P VV ++ID Y+K G + +++ +FD M R V+++N+M+ GY ++
Sbjct: 269 EDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNK 328
Query: 369 EGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI--------FYDMTSGK 420
E LE+F+ M +E+ + PD T++ VL + G + +D+ FY GK
Sbjct: 329 YHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY--LGGK 386
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPTAAIWGSLLGACSVHSNVDI 477
+GV ++D+ + G ++ A FE I+ + W +++G ++H +
Sbjct: 387 LGV--------ALIDMYSKCGSIQHAMLVFEGIENKSIDH----WNAMIGGLAIHG---L 431
Query: 478 GVFVGHRLLEIE 489
G LL+IE
Sbjct: 432 GESAFDMLLQIE 443
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 144/457 (31%), Positives = 245/457 (53%), Gaps = 53/457 (11%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPN 194
+I Y + + A +FDEMPERN+VSW +M+ A QRG +A+NLF +M R
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDV--- 202
Query: 195 EFTFATVXSMLGRQIHSLIIKSNYDA----HVYVGSSLLDMYAKDGKIHEARGIFECLPE 250
++ + L + + +D ++ ++++ YA++ +I EA +F+ +PE
Sbjct: 203 -VSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPE 261
Query: 251 RD-------------------------------VVSCTAIISGYAQLGLDEEALDLF-RQ 278
RD V+S T +I+GY + +EEAL++F +
Sbjct: 262 RDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKM 321
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
LR ++ N TY S+L+A S LA L G+Q+H + +S ++ ++L++MYSK G
Sbjct: 322 LRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 339 LTYSRRIFDT--MQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
L +R++FD + +R ++SWN+M+ Y HG G+E +E++ MR+ KP VT L +
Sbjct: 382 LIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHG-FKPSAVTYLNL 440
Query: 397 LSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE 456
L CSH GL ++G++ F D+ + + ++EHY C+VDL GRAGR+++ FI
Sbjct: 441 LFACSHAGLVEKGMEFFKDLVRDE-SLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDAR 499
Query: 457 PTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLR 507
+ + +G++L AC+VH+ V I V ++LE + +AG Y +S + +R
Sbjct: 500 LSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMR 559
Query: 508 DMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRRE 544
M +K + K+PG S +++ + H F D+SHP+ E
Sbjct: 560 MKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQFE 596
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 57/350 (16%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM 186
P V LI K + +AR +FD +PER+VV+WT +I+ Y + G +A LF
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD-- 101
Query: 187 LRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE 246
R + N T+ ++++ Y + ++ A +F+
Sbjct: 102 -RVDSRKNVVTW---------------------------TAMVSGYLRSKQLSIAEMLFQ 133
Query: 247 CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH 306
+PER+VVS +I GYAQ G ++AL+LF ++ + N V++ S++ AL +D
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDE 189
Query: 307 GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGK 366
+ + R +V S+ +++D +K G + +RR+FD M ER ++SWNAM+ GY +
Sbjct: 190 AMNLFERMPRRDVVSWT----AMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQ 245
Query: 367 HGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPK 426
+ E +LF +M E D + +++G ++ +F M P+
Sbjct: 246 NNRIDEADQLFQVMPER-----DFASWNTMITGFIRNREMNKACGLFDRM--------PE 292
Query: 427 KEHYGCVVDLLG--RAGRVEEAFEFIKKM----PFEPTAAIWGSLLGACS 470
K + G EEA KM +P + S+L ACS
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACS 342
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE-- 154
Y ++L+ C L EGQ++H + K+ + + + + L+ +Y+K L AR +FD
Sbjct: 334 YVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGL 393
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF 198
+ +R+++SW +MI+ Y+ G+ +A+ ++ QM + G +P+ T+
Sbjct: 394 VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTY 437
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 159/440 (36%), Positives = 218/440 (49%), Gaps = 50/440 (11%)
Query: 128 SVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQML 187
+V L T +I Y L AR FD PER++V W MIS Y + G +A +LF QM
Sbjct: 58 NVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQM- 116
Query: 188 RSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFEC 247
P R + S +++L+ YA G + +F+
Sbjct: 117 -----P------------CRDVMSW-------------NTVLEGYANIGDMEACERVFDD 146
Query: 248 LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG-MQSNYVTYASVLTALSGLASLDH 306
+PER+V S +I GYAQ G E L F+++ EG + N T VL+A + L + D
Sbjct: 147 MPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDF 206
Query: 307 GKQVHNHVLRSEVPSY----VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLV 362
GK VH + E Y V ++N+LIDMY KCG + + +F ++ R ++SWN M+
Sbjct: 207 GKWVHKY---GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMIN 263
Query: 363 GYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIG 422
G HG G E L LF M+ + PD VT + VL C H GL + GL F M +
Sbjct: 264 GLAAHGHGTEALNLFHEMKNSG-ISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT-DFS 321
Query: 423 VEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVG 482
+ P+ EH GCVVDLL RAG + +A EFI KMP + A IW +LLGA V+ VDIG
Sbjct: 322 IMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVAL 381
Query: 483 HRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTF 533
L+++E N N+ LS D L+ M KE G S IE D L F
Sbjct: 382 EELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKF 441
Query: 534 HASDRSHPRREEVYIKVKEL 553
++S HPR EE+ ++EL
Sbjct: 442 YSSGEKHPRTEELQRILREL 461
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 115/256 (44%), Gaps = 33/256 (12%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLP-SVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
+L+ C A G+ VH + Y V ++ LI +Y KC ++ A VF + R
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNY 218
+++SW MI+ + G+ ++ALNLF +M SG P++ TF V L H +++
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGV---LCACKHMGLVE--- 307
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQ 278
D Y S D F +PE + C ++ ++ G +A++ +
Sbjct: 308 DGLAYFNSMFTD--------------FSIMPE--IEHCGCVVDLLSRAGFLTQAVEFINK 351
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE---VPSYVVLQNSLIDMYSK 335
+ ++++ V +A++L A +D G+ +++ E ++V+L N +Y
Sbjct: 352 MP---VKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSN----IYGD 404
Query: 336 CGNLTYSRRIFDTMQE 351
G + R+ M++
Sbjct: 405 AGRFDDAARLKVAMRD 420
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/496 (30%), Positives = 254/496 (51%), Gaps = 57/496 (11%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+++HAH ++T + L RL+++ +L AR +FD + +I AY
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIHSLIIKSNYDAHVYVG 225
+++ L+ + G P+ TF + + R +HS +S +++ +
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 226 SSLLDMYAKDGKI------------------------HEARG-------IFECLPERDVV 254
++L+ YAK G + ++ RG +F+ +P ++V
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 255 SCTAIISGYAQLGLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
S T +ISG++Q G EAL +F + + + ++ N++T SVL A + L L+ G+++ +
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM-QERTVMSWNAMLVGYGKHGEGRE 372
+ + + N+ I+MYSKCG + ++R+F+ + +R + SWN+M+ HG+ E
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
L LF M E E KPD VT + +L C HGG+ +G ++F M + PK EHYGC
Sbjct: 301 ALTLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVH-KISPKLEHYGC 358
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
++DLLGR G+++EA++ IK MP +P A +WG+LLGACS H NV+I L ++E N
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTN 418
Query: 493 AGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSR-IELDQVLHTFHASDRSHPR 542
GN +S V +R +M K+ + K G S +E+ +H F D+SHPR
Sbjct: 419 PGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPR 478
Query: 543 REEVYIKVKELSVRFK 558
E+Y ++E+ R K
Sbjct: 479 SYEIYQVLEEIFRRMK 494
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 225/395 (56%), Gaps = 23/395 (5%)
Query: 148 ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-- 205
R +F +P+ +V +W AM+S YS + +A++ F QM +P++ T + + S
Sbjct: 369 GRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCAR 428
Query: 206 ------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE-CLPERDVVSCTA 258
G+QIH ++I++ + ++ S L+ +Y++ K+ + IF+ C+ E D+ +
Sbjct: 429 LRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNS 488
Query: 259 IISGYAQLGLDEEALDLFRQLRGEG-MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
+ISG+ LD +AL LFR++ + N ++A+VL++ S L SL HG+Q H V++S
Sbjct: 489 MISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKS 548
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF 377
S ++ +L DMY KCG + +R+ FD + + + WN M+ GYG +G G E + L+
Sbjct: 549 GYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLY 608
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI-GVEPKKEHYGCVVDL 436
M E KPDG+T ++VL+ CSH GL + GL+I M +I G+EP+ +HY C+VD
Sbjct: 609 RKMISSGE-KPDGITFVSVLTACSHSGLVETGLEILSSMQ--RIHGIEPELDHYICIVDC 665
Query: 437 LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNY 496
LGRAGR+E+A + + P++ ++ +W LL +C VH +V + V +L+ ++ ++ Y
Sbjct: 666 LGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAY 725
Query: 497 FFLSXDVRSLRD---------MMLKKAVMKEPGRS 522
LS SLR +M K V K PG+S
Sbjct: 726 VLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 199/416 (47%), Gaps = 59/416 (14%)
Query: 107 KRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM----------- 155
+R G+ +H +++ +L RL+ LY +C AR VFDEM
Sbjct: 19 ERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAF 78
Query: 156 --------------------PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNE 195
PER+VVSW MIS ++G+ +AL ++ +M+ G P+
Sbjct: 79 LTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSR 138
Query: 196 FTFATVXS--------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE-ARGIFE 246
FT A+V S + G + H + +K+ D +++VG++LL MYAK G I + +FE
Sbjct: 139 FTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFE 198
Query: 247 CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT---------A 297
L + + VS TA+I G A+ EA+ +FR + +G+Q + V +++L+ +
Sbjct: 199 SLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDS 258
Query: 298 LSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSW 357
LS + + GKQ+H LR + L NSL+++Y+K ++ + IF M E V+SW
Sbjct: 259 LSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSW 318
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMT 417
N M+VG+G+ + +E T MR+ +P+ VT ++VL C G + G IF +
Sbjct: 319 NIMIVGFGQEYRSDKSVEFLTRMRDSG-FQPNEVTCISVLGACFRSGDVETGRRIFSSIP 377
Query: 418 SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE---PTAAIWGSLLGACS 470
+P + ++ EEA ++M F+ P +L +C+
Sbjct: 378 ------QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCA 427
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 141/290 (48%), Gaps = 28/290 (9%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G+++H ++ + + L L+ +Y K + A +F EMPE NVVSW MI + Q
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMY 232
+ +++ +M SG +PNE T S+LG S
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNE---VTCISVLGACFRS--------------------- 363
Query: 233 AKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYA 292
G + R IF +P+ V + A++SGY+ EEA+ FRQ++ + ++ + T +
Sbjct: 364 ---GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLS 420
Query: 293 SVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF-DTMQE 351
+L++ + L L+ GKQ+H V+R+E+ + + LI +YS+C + S IF D + E
Sbjct: 421 VILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINE 480
Query: 352 RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ WN+M+ G+ + + L LF M + + P+ + VLS CS
Sbjct: 481 LDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCS 530
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 158/305 (51%), Gaps = 29/305 (9%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE-MP 156
+ +L+ C R L G+++H +I+T + + + LI +Y++C+ + + +FD+ +
Sbjct: 420 SVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCIN 479
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE-PNEFTFATVXS--------MLGR 207
E ++ W +MIS + ++AL LF +M ++ PNE +FATV S + GR
Sbjct: 480 ELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGR 539
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
Q H L++KS Y + +V ++L DMY K G+I AR F+ + ++ V +I GY G
Sbjct: 540 QFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNG 599
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALS-------GLASLDHGKQVHNHVLRSEVP 320
+EA+ L+R++ G + + +T+ SVLTA S GL L +++H + E+
Sbjct: 600 RGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHG--IEPELD 657
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFD-TMQERTVMSWNAMLVGYGKHGE---GREVLEL 376
Y+ ++D + G L + ++ + T + + + W +L HG+ R V E
Sbjct: 658 HYIC----IVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAE- 712
Query: 377 FTLMR 381
LMR
Sbjct: 713 -KLMR 716
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 20/176 (11%)
Query: 87 LCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLR 146
LC ++ F +L+ C +L G++ H ++K+ Y+ F+ T L +Y KC +
Sbjct: 515 LCPNETSFA---TVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEID 571
Query: 147 DARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML- 205
AR FD + +N V W MI Y G +A+ L+ +M+ SG +P+ TF +V +
Sbjct: 572 SARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACS 631
Query: 206 -------GRQIHSLI-----IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
G +I S + I+ D ++ ++D + G++ +A + E P
Sbjct: 632 HSGLVETGLEILSSMQRIHGIEPELDHYI----CIVDCLGRAGRLEDAEKLAEATP 683
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 307 GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGK 366
GK +H ++R + S L N L+D+Y +CG+ Y+R++FD M R V SWNA L K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 367 HGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPK 426
G+ E E+F M E + V + M++VL G E++ L ++ M G P
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWN--NMISVL---VRKGFEEKALVVYKRMVCD--GFLPS 137
Query: 427 KEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLL 486
+ V+ + ++G +V + +D +FVG+ LL
Sbjct: 138 RFTLASVLSACSKV-----------------LDGVFGMRCHGVAVKTGLDKNIFVGNALL 180
Query: 487 EI 488
+
Sbjct: 181 SM 182
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 239 bits (610), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 152/457 (33%), Positives = 250/457 (54%), Gaps = 42/457 (9%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
L+++C ++L+ +++HA +I + ++L+ L + L A + ++P +
Sbjct: 15 LISKC---KSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPS 70
Query: 160 VVSWTAMISAYSQRGYASQ---ALNLFVQMLRSGTE---PNEFTFATVXSMLG------- 206
V + +IS+ ++Q A +L+ Q+L S + PNEFT+ ++ G
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHR 130
Query: 207 --RQIHSLIIK----SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
R +H+ ++K N+D +V ++L+ YA GK+ EAR +FE + E D+ + ++
Sbjct: 131 HGRALHAHVLKFLEPVNHDR--FVQAALVGFYANCGKLREARSLFERIREPDLATWNTLL 188
Query: 261 SGYA---QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
+ YA ++ DEE L LF +++ ++ N ++ +++ + + L G H +VL++
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKN 245
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF 377
+ + SLID+YSKCG L+++R++FD M +R V +NAM+ G HG G+E +EL+
Sbjct: 246 NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELY 305
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
+ + V PD T + +S CSH GL D GL IF M + G+EPK EHYGC+VDLL
Sbjct: 306 KSLISQGLV-PDSATFVVTISACSHSGLVDEGLQIFNSMKA-VYGIEPKVEHYGCLVDLL 363
Query: 438 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYF 497
GR+GR+EEA E IKKMP +P A +W S LG+ H + + G LL +E N+GNY
Sbjct: 364 GRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYV 423
Query: 498 FLS---------XDVRSLRDMMLKKAVMKEPGRSRIE 525
LS DV R++M V K PG S +
Sbjct: 424 LLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTLN 460
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 12/224 (5%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
AL+ C + G H +++K + F+ T LI LY+KC L AR VFDEM +R
Sbjct: 221 ALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQR 280
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQI- 209
+V + AMI + G+ + + L+ ++ G P+ TF S G QI
Sbjct: 281 DVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIF 340
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
+S+ + V L+D+ + G++ EA + +P + + G +Q D
Sbjct: 341 NSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGD 400
Query: 270 EEALDL-FRQLRGEGMQS--NYVTYASVLTALSGLASLDHGKQV 310
E ++ + L G ++ NYV +++ ++ ++ +++
Sbjct: 401 FERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTREL 444
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 238 bits (607), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 253/463 (54%), Gaps = 45/463 (9%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
L++ L+ G+ V + I+ + + L + ++ +Y KC S+ DA+ VFD E++
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKD 440
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYD 219
++ W +++AY++ G + +AL LF M G PN T+ +LII S
Sbjct: 441 LILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITW------------NLIILS--- 485
Query: 220 AHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGLDEEALDL 275
++G++ EA+ +F + +++S T +++G Q G EEA+
Sbjct: 486 ------------LLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILF 533
Query: 276 FRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS-EVPSYVVLQNSLIDMYS 334
R+++ G++ N + L+A + LASL G+ +H +++R+ + S V ++ SL+DMY+
Sbjct: 534 LRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYA 593
Query: 335 KCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTML 394
KCG++ + ++F + + NAM+ Y +G +E + L+ + E +KPD +T+
Sbjct: 594 KCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL-EGVGLKPDNITIT 652
Query: 395 AVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP 454
VLS C+H G ++ ++IF D+ S K ++P EHYG +VDLL AG E+A I++MP
Sbjct: 653 NVLSACNHAGDINQAIEIFTDIVS-KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMP 711
Query: 455 FEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRS 505
F+P A + SL+ +C+ ++ ++ +LLE E N+GNY +S +V
Sbjct: 712 FKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVK 771
Query: 506 LRDMMLKKAVMKEPGRSRIEL--DQVLHTFHASDRSHPRREEV 546
+R+MM K + K+PG S I++ ++ +H F A+D++H R E+
Sbjct: 772 MREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEI 814
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 125/386 (32%), Positives = 211/386 (54%), Gaps = 14/386 (3%)
Query: 104 CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSW 163
C + + R G+ VH +++K+ VF+ + L +Y KC L DA VFDE+P+RN V+W
Sbjct: 183 CGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAW 242
Query: 164 TAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIK 215
A++ Y Q G +A+ LF M + G EP T +T S G+Q H++ I
Sbjct: 243 NALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIV 302
Query: 216 SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDL 275
+ + +G+SLL+ Y K G I A +F+ + E+DVV+ IISGY Q GL E+A+ +
Sbjct: 303 NGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 276 FRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSK 335
+ +R E ++ + VT A++++A + +L GK+V + +R S +VL ++++DMY+K
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAK 422
Query: 336 CGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLA 395
CG++ ++++FD+ E+ ++ WN +L Y + G E L LF M+ E V P+ +T
Sbjct: 423 CGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG-VPPNVITWNL 481
Query: 396 VLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP- 454
++ G D D+F M S G+ P + +++ + + G EEA F++KM
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSS--GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQE 539
Query: 455 --FEPTAAIWGSLLGACSVHSNVDIG 478
P A L AC+ +++ IG
Sbjct: 540 SGLRPNAFSITVALSACAHLASLHIG 565
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 200/382 (52%), Gaps = 14/382 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTR--YLPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
Y +L CV +R L G+++HA ++K Y + ++ T+L++ Y KCD+L A +F +
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSK 132
Query: 155 MPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV--------XSMLG 206
+ RNV SW A+I + G AL FV+ML + P+ F V S G
Sbjct: 133 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
R +H ++KS + V+V SSL DMY K G + +A +F+ +P+R+ V+ A++ GY Q
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G +EEA+ LF +R +G++ VT ++ L+A + + ++ GKQ H + + + +L
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
SL++ Y K G + Y+ +FD M E+ V++WN ++ GY + G + + + LMR E ++
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLE-KL 371
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
K D VT+ ++S + E+ L + E V+D+ + G + +A
Sbjct: 372 KYDCVTLATLMSAAAR--TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDA 429
Query: 447 FEFIKKMPFEPTAAIWGSLLGA 468
+ E +W +LL A
Sbjct: 430 KKVFDS-TVEKDLILWNTLLAA 450
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 92/213 (43%), Gaps = 14/213 (6%)
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE- 318
+S + G +EAL L ++ ++ Y +L L GKQ+H +L++
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 319 -VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF 377
++ L+ Y+KC L + +F ++ R V SW A++ + G L F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLE----DRGLDIFYDMTSGKIGVEPKKEHYGCV 433
M ENE+ PD + V C G L+ RG+ + K G+E +
Sbjct: 162 VEML-ENEIFPDNFVVPNVCKAC--GALKWSRFGRGVHGYVV----KSGLEDCVFVASSL 214
Query: 434 VDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
D+ G+ G +++A + ++P + A W +L+
Sbjct: 215 ADMYGKCGVLDDASKVFDEIP-DRNAVAWNALM 246
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/478 (30%), Positives = 251/478 (52%), Gaps = 23/478 (4%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
M + G D Y+ +LN C + G+ +HA +I + L + L L+ +Y C
Sbjct: 290 NMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCG 349
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGT-EPNEFTFATVX 202
+R+A +VF + N+VSW ++IS S+ G+ QA+ ++ ++LR T P+E+TF+
Sbjct: 350 DMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAI 409
Query: 203 SML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVV 254
S G+ +H + K Y+ V+VG++LL MY K+ + A+ +F+ + ERDVV
Sbjct: 410 SATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVV 469
Query: 255 SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV 314
T +I G+++LG E A+ F ++ E +S+ + +SV+ A S +A L G+ H
Sbjct: 470 LWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLA 529
Query: 315 LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVL 374
+R+ + + +L+DMY K G + IF + WN+ML Y +HG + L
Sbjct: 530 IRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKAL 589
Query: 375 ELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVV 434
F + EN PD VT L++L+ CSH G +G ++ M + G++ +HY C+V
Sbjct: 590 SFFEQIL-ENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMK--EQGIKAGFKHYSCMV 646
Query: 435 DLLGRAGRVEEAFEFIKKM-PFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNA 493
+L+ +AG V+EA E I++ P A +W +LL AC N+ IG++ ++L+++ +
Sbjct: 647 NLVSKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDT 706
Query: 494 GNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIEL-DQVLHTFHASDRSHP 541
+ LS DV +R + A K+PG S IE+ + F + D+S+P
Sbjct: 707 ATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNP 764
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 208/401 (51%), Gaps = 15/401 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +L+ C + G +++ +IK Y +V ++T ++ +Y+ C L AR +FD +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQ 208
R+ V+W MI + L F ML SG +P +FT++ V + LG+
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH+ II S+ A + + ++LLDMY G + EA +F + ++VS +IISG ++ G
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 381
Query: 269 DEEALDLFRQ-LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
E+A+ ++R+ LR + + T+++ ++A + HGK +H V + V +
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGT 441
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLM-REENEV 386
+L+ MY K ++++FD M+ER V+ W M+VG+ + G ++ F M RE+N
Sbjct: 442 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN-- 499
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
+ DG ++ +V+ CS + +G ++F+ + + G + G +VD+ G+ G+ E A
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQG-EVFHCLAI-RTGFDCVMSVCGALVDMYGKNGKYETA 557
Query: 447 FEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
E I + P W S+LGA S H V+ + ++LE
Sbjct: 558 -ETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 164/315 (52%), Gaps = 12/315 (3%)
Query: 100 LLNECVSKRALREGQRVHAHMIKT---RYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
L +CVS L+ +++HA ++ S + LI +Y +C SL AR VFD+MP
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 157 ERNVVSWTAMISAYSQR-GYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGR 207
RNVVS+ A+ SAYS+ +AS A L M +PN TF ++ ++G
Sbjct: 160 HRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGS 219
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
++S IIK Y +V V +S+L MY+ G + AR IF+C+ RD V+ +I G +
Sbjct: 220 SLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKND 279
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
E+ L FR + G+ TY+ VL S L S GK +H ++ S+ + + L N
Sbjct: 280 KIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDN 339
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
+L+DMY CG++ + +F + ++SWN+++ G ++G G + + ++ + + +
Sbjct: 340 ALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPR 399
Query: 388 PDGVTMLAVLSGCSH 402
PD T A +S +
Sbjct: 400 PDEYTFSAAISATAE 414
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 186/391 (47%), Gaps = 30/391 (7%)
Query: 130 FLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRS 189
+ LI +Y +C SL AR VFD+MP+RN+V+ + + + Y S +L Q+++
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFE---YVSMGSSLHSQIIKL 79
Query: 190 GT-------EPNEFTFATVX--------SML--GRQIHSLIIKSNYDAHV---YVGSSLL 229
G+ NE + V ++L RQIH+L++ + A Y ++L+
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 230 DMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ-LGLDEEALDLFRQLRGEGMQSNY 288
MY + G + +AR +F+ +P R+VVS A+ S Y++ A L + E ++ N
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 289 VTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
T+ S++ + L + G +++ +++ VV+Q S++ MYS CG+L +RRIFD
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 349 MQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDR 408
+ R ++WN M+VG K+ + + L F M V P T VL+GCS G
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSG-VDPTQFTYSIVLNGCSKLGSYSL 318
Query: 409 GLDIFYD-MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 467
G I + S + P ++D+ G + EAF ++ P W S++
Sbjct: 319 GKLIHARIIVSDSLADLPLDN---ALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSIIS 374
Query: 468 ACSVHSNVDIGVFVGHRLLEIETGNAGNYFF 498
CS + + + + RLL + T Y F
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTF 405
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 138/398 (34%), Positives = 209/398 (52%), Gaps = 13/398 (3%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE---MPE 157
L C L G+++H ++K+ S F + LI +Y+ C SL A VF +
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQI 209
+V W +M+S + AL L +Q+ +S + +T + + LG Q+
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV 364
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
HSL++ S Y+ VGS L+D++A G I +A +F LP +D+++ + +I G + G +
Sbjct: 365 HSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFN 424
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
A LFR+L G+ ++ +++L S LASL GKQ+H ++ S V +L
Sbjct: 425 SLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATAL 484
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
+DMY KCG + +FD M ER V+SW ++VG+G++G E F M ++P+
Sbjct: 485 VDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIG-IEPN 543
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF 449
VT L +LS C H GL + M S + G+EP EHY CVVDLLG+AG +EA E
Sbjct: 544 KVTFLGLLSACRHSGLLEEARSTLETMKS-EYGLEPYLEHYYCVVDLLGQAGLFQEANEL 602
Query: 450 IKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
I KMP EP IW SLL AC H N + + +LL+
Sbjct: 603 INKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLK 640
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/424 (29%), Positives = 196/424 (46%), Gaps = 57/424 (13%)
Query: 92 MKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHV 151
M K A L C +A + G+ + AH+IK +VF+ +I +Y L DA V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 152 FDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE-PNEFTFATVXS------- 203
FDEM ERN+V+WT M+S Y+ G ++A+ L+ +ML S E NEF ++ V
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 204 -MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 262
LG ++ I K N V + +S++DMY K+G++ EA F+ + S +ISG
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 263 YAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA----------------------LSG 300
Y + GL +EA+ LF ++ Q N V++ +++ L G
Sbjct: 183 YCKAGLMDEAVTLFHRMP----QPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDG 238
Query: 301 LA------------SLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
A L GKQ+H V++S + S ++LIDMYS CG+L Y+ +F
Sbjct: 239 FALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFH- 297
Query: 349 MQER-----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHG 403
QE+ +V WN+ML G+ + E L L L ++++ D T+ L C +
Sbjct: 298 -QEKLAVNSSVAVWNSMLSGFLINEENEAALWLL-LQIYQSDLCFDSYTLSGALKICINY 355
Query: 404 GLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWG 463
GL + + G E +VDL G +++A + ++P + A G
Sbjct: 356 VNLRLGLQVHSLVVVS--GYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSG 413
Query: 464 SLLG 467
+ G
Sbjct: 414 LIRG 417
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 183/430 (42%), Gaps = 65/430 (15%)
Query: 93 KFKGYNALLNECVSKRALREGQRVHAHM-IKTRYLPSVFLRTRLIVLYTKCDSLRDARHV 151
+G L+N V ++ G+ + A+ K PS LI Y K + +A +
Sbjct: 137 NLRGDVVLMNSVVDMY-VKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTL 195
Query: 152 FDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEF---------TFATVX 202
F MP+ NVVSW +IS + +G + +AL V+M R G + F +F +
Sbjct: 196 FHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 203 SMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIF---ECLPERDVVSCTAI 259
+M G+Q+H ++KS ++ + S+L+DMY+ G + A +F + V ++
Sbjct: 255 TM-GKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
+SG+ +E AL L Q+ + + T + L +L G QVH+ V+ S
Sbjct: 314 LSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTL 379
++ + L+D+++ GN+ + ++F + + +++++ ++ G K G F L
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLA---FYL 430
Query: 380 MREENEVKPDGVTMLA--VLSGCS-----------HG----------------------- 403
RE ++ D + +L CS HG
Sbjct: 431 FRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVK 490
Query: 404 -GLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM---PFEPTA 459
G D G+ +F M +E + ++ G+ GRVEEAF + KM EP
Sbjct: 491 CGEIDNGVVLFDGM------LERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNK 544
Query: 460 AIWGSLLGAC 469
+ LL AC
Sbjct: 545 VTFLGLLSAC 554
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 10/173 (5%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L C S +L G+++H IK Y T L+ +Y KC + + +FD M ER+
Sbjct: 449 ILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERD 508
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM-----LGRQIHSLI- 213
VVSWT +I + Q G +A F +M+ G EPN+ TF + S L + S +
Sbjct: 509 VVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLE 568
Query: 214 -IKSNYDAHVYVGS--SLLDMYAKDGKIHEARGIFECLP-ERDVVSCTAIISG 262
+KS Y Y+ ++D+ + G EA + +P E D T++++
Sbjct: 569 TMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTA 621
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 3/183 (1%)
Query: 303 SLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLV 362
+ G+ + HV++ + V + N++I MY L+ + ++FD M ER +++W M+
Sbjct: 20 AFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVS 79
Query: 363 GYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIG 422
GY G+ + +EL+ M + E + AVL C G + D L I GK
Sbjct: 80 GYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKAC--GLVGDIQLGILVYERIGKEN 137
Query: 423 VEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVG 482
+ VVD+ + GR+ EA K++ P++ W +L+ +D V +
Sbjct: 138 LRGDVVLMNSVVDMYVKNGRLIEANSSFKEI-LRPSSTSWNTLISGYCKAGLMDEAVTLF 196
Query: 483 HRL 485
HR+
Sbjct: 197 HRM 199
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/445 (30%), Positives = 232/445 (52%), Gaps = 22/445 (4%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+ L+NE + +G+ H +I+ + + L+ +Y K + L A +F + E
Sbjct: 335 SCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISE 394
Query: 158 R-NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQ 208
N +W M+ Y + + + LF ++ G E + + +V S +LG+
Sbjct: 395 EGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKS 454
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H ++K++ D + V +SL+D+Y K G + A +F C + +V++ A+I+ Y
Sbjct: 455 LHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQ 513
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
E+A+ LF ++ E + + +T ++L A SL+ G+ +H ++ +E + L +
Sbjct: 514 SEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAA 573
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
LIDMY+KCG+L SR +FD ++ + WN M+ GYG HG+ + LF M EE++VKP
Sbjct: 574 LIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQM-EESDVKP 632
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
G T LA+LS C+H GL ++G +F M + V+P +HY C+VDLL R+G +EEA
Sbjct: 633 TGPTFLALLSACTHAGLVEQGKKLFLKMH--QYDVKPNLKHYSCLVDLLSRSGNLEEAES 690
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------- 501
+ MPF P IWG+LL +C H ++G+ + R + + N G Y L+
Sbjct: 691 TVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGK 750
Query: 502 --DVRSLRDMMLKKAVMKEPGRSRI 524
+ R+MM + V K G S +
Sbjct: 751 WEEAERAREMMRESGVGKRAGHSVV 775
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 202/404 (50%), Gaps = 14/404 (3%)
Query: 104 CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSW 163
C + AL+EG+ +H +K S F+++ + Y+K + +A F E+ + ++ SW
Sbjct: 240 CSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSW 299
Query: 164 TAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQI--------HSLIIK 215
T++I++ ++ G ++ ++F +M G P+ + + + LG+ + H +I+
Sbjct: 300 TSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIR 359
Query: 216 SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER-DVVSCTAIISGYAQLGLDEEALD 274
+ V +SLL MY K + A +F + E + + ++ GY ++ + ++
Sbjct: 360 HCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIE 419
Query: 275 LFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYS 334
LFR+++ G++ + + SV+++ S + ++ GK +H +V+++ + + + NSLID+Y
Sbjct: 420 LFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYG 479
Query: 335 KCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTML 394
K G+LT + R+F + V++WNAM+ Y + + + LF M EN KP +T++
Sbjct: 480 KMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSEN-FKPSSITLV 537
Query: 395 AVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP 454
+L C + G +RG I +T + E ++D+ + G +E++ E
Sbjct: 538 TLLMACVNTGSLERGQMIHRYITETE--HEMNLSLSAALIDMYAKCGHLEKSRELFDAGN 595
Query: 455 FEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFF 498
+ A W ++ +H +V+ + + ++ E + G F
Sbjct: 596 -QKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFL 638
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/327 (30%), Positives = 165/327 (50%), Gaps = 19/327 (5%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE-- 192
+ Y+KC L+DA VFDEMP+R+VV+WTA+IS + Q G + L +M +G++
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 193 -PN----EFTFATVXSM----LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARG 243
PN E F ++ GR +H +K+ + +V SS+ Y+K G EA
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 244 IFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLAS 303
F L + D+ S T+II+ A+ G EE+ D+F +++ +GM + V + ++ L +
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 304 LDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER-TVMSWNAMLV 362
+ GK H V+R + NSL+ MY K L+ + ++F + E +WN ML
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 363 GYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGG--LEDRGLDIFYDMTSGK 420
GYGK + +ELF ++ ++ D + +V+S CSH G L + L + TS
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLG-IEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD 465
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEAF 447
+ + ++DL G+ G + A+
Sbjct: 466 LTISVVNS----LIDLYGKMGDLTVAW 488
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 150/300 (50%), Gaps = 14/300 (4%)
Query: 112 EGQRVHAHMIKTRYLP-SVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAY 170
E R H +I T L ++F+ ++LI Y + VF + R++ W ++I A+
Sbjct: 41 ESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAH 100
Query: 171 SQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIK-SNYDAH 221
G +++L F ML SG P+ FT V S +G +H L++K +D +
Sbjct: 101 FSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRN 160
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
VG+S + Y+K G + +A +F+ +P+RDVV+ TAIISG+ Q G E L ++
Sbjct: 161 TAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHS 220
Query: 282 EGM---QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
G + N T A S L +L G+ +H +++ + S +Q+S+ YSK GN
Sbjct: 221 AGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGN 280
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLS 398
+ + F + + + SW +++ + G+ E ++F M+ + + PDGV + +++
Sbjct: 281 PSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKG-MHPDGVVISCLIN 339
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 152/493 (30%), Positives = 251/493 (50%), Gaps = 57/493 (11%)
Query: 108 RALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMI 167
R + EG++VH + +K ++ L+ +Y + VFDEMP+R+VVSW +I
Sbjct: 60 RKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLI 119
Query: 168 SAYSQRGYASQALNLFVQMLR-SGTEPNEFTFATVXSM--------LGRQIHSLIIKSNY 218
S+Y G A+ +F +M + S + +E T + S +G +I+ ++ + +
Sbjct: 120 SSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEF 178
Query: 219 DAHVYVGSSLLDMYAK-------------------------------DGKIHEARGIFEC 247
+ V +G++L+DM+ K G+I EAR +FE
Sbjct: 179 EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
Query: 248 LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG 307
P +DVV TA+++GY Q +EAL+LFR ++ G++ + S+LT + +L+ G
Sbjct: 239 SPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQG 298
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKH 367
K +H ++ + V V+ +L+DMY+KCG + + +F ++ER SW +++ G +
Sbjct: 299 KWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMN 358
Query: 368 GEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKK 427
G L+L+ M E V+ D +T +AVL+ C+HGG G IF+ MT + V+PK
Sbjct: 359 GMSGRALDLYYEM-ENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTE-RHNVQPKS 416
Query: 428 EHYGCVVDLLGRAGRVEEAFEFIKKM---PFEPTAAIWGSLLGACSVHSNVDIGVFVGHR 484
EH C++DLL RAG ++EA E I KM E ++ SLL A + NV I V +
Sbjct: 417 EHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEK 476
Query: 485 LLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHA 535
L ++E ++ + L+ DV ++R M + K PG S IE+D V H F
Sbjct: 477 LEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIV 536
Query: 536 SDR--SHPRREEV 546
D SHP+ +E+
Sbjct: 537 GDDLLSHPKMDEI 549
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 175/348 (50%), Gaps = 45/348 (12%)
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR--------QIH 210
+++ + M+ + + ++ L LF ++ G P+ FT V +GR ++H
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
+K+ + YV +SL+ MYA GKI +F+ +P+RDVVS +IS Y G E
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFE 129
Query: 271 EALDLFRQLRGE-GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
+A+ +F+++ E ++ + T S L+A S L +L+ G++++ V+ +E V + N+L
Sbjct: 130 DAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNAL 188
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGY---GKHGEGR--------------- 371
+DM+ KCG L +R +FD+M+++ V W +M+ GY G+ E R
Sbjct: 189 VDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWT 248
Query: 372 -------------EVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTS 418
E LELF M+ ++PD ++++L+GC+ G ++G I +
Sbjct: 249 AMMNGYVQFNRFDEALELFRCMQTAG-IRPDNFVLVSLLTGCAQTGALEQGKWIHGYINE 307
Query: 419 GKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
++ V+ K +VD+ + G +E A E ++ TA+ W SL+
Sbjct: 308 NRVTVD--KVVGTALVDMYAKCGCIETALEVFYEIKERDTAS-WTSLI 352
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 41/290 (14%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM----- 155
L+ C + + L G+R++ ++ T + SV + L+ ++ KC L AR VFD M
Sbjct: 155 LSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNV 213
Query: 156 --------------------------PERNVVSWTAMISAYSQRGYASQALNLFVQMLRS 189
P ++VV WTAM++ Y Q +AL LF M +
Sbjct: 214 KCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTA 273
Query: 190 GTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEA 241
G P+ F ++ + G+ IH I ++ VG++L+DMYAK G I A
Sbjct: 274 GIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETA 333
Query: 242 RGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL 301
+F + ERD S T++I G A G+ ALDL+ ++ G++ + +T+ +VLTA +
Sbjct: 334 LEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHG 393
Query: 302 ASLDHGKQV-HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ 350
+ G+++ H+ R V + LID+ + G L + + D M+
Sbjct: 394 GFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMR 443
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 32/226 (14%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
+LL C AL +G+ +H ++ + R + T L+ +Y KC + A VF E+ ER
Sbjct: 284 SLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER 343
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNY 218
+ SWT++I + G + +AL+L+ +M G + TF V +
Sbjct: 344 DTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNH----------- 392
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS-----CTAIISGYAQLGLDEEAL 273
G + E R IF + ER V C+ +I + GL +EA
Sbjct: 393 ----------------GGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAE 436
Query: 274 DLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
+L ++RGE ++ Y S+L+A ++ ++V + + EV
Sbjct: 437 ELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEV 482
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 214/377 (56%), Gaps = 24/377 (6%)
Query: 278 QLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCG 337
+L +G + + + + + L SL+H K+VH+H L+S+ L N +I M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 338 NLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
++T ++R+FD M ++ + SW+ M+ Y +G G + L LF M + +KP+ T L V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHG-LKPNEETFLTVF 344
Query: 398 SGCSH-GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE 456
C+ GG+E+ L +D + G+ PK EHY V+ +LG+ G + EA ++I+ +PFE
Sbjct: 345 LACATVGGIEEAFL--HFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFE 402
Query: 457 PTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDVRSLRDMMLKKAVM 516
PTA W ++ +H ++D+ ++ +++++ A + +S ++ + +
Sbjct: 403 PTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTS-- 460
Query: 517 KEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEE 576
+SRI L+ TF+ + KE++ + K YVPD VLHD+D+E
Sbjct: 461 ----KSRI-LEFRNLTFYKDE------------AKEMAAK-KGVVYVPDTRFVLHDIDQE 502
Query: 577 QKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDK 636
KE+ LL HSE+LA+++G+I TP + +IKNLR+C DCHNF K +SKI GR + +RD
Sbjct: 503 AKEQALLYHSERLAIAYGIICTPPRKTLTIIKNLRVCGDCHNFIKIMSKIIGRVLIVRDN 562
Query: 637 NRFHQIVGGKCSCGDYW 653
RFH GKCSCGDYW
Sbjct: 563 KRFHHFKDGKCSCGDYW 579
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 13/191 (6%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
L C + ++L ++VH H +++++ L +I ++ +C S+ DA+ VFD M +++
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKD 301
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF-------ATVXSMLGRQIHSL 212
+ SW M+ AYS G AL+LF +M + G +PNE TF ATV + +H
Sbjct: 302 MDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFD 361
Query: 213 IIKSNY----DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+K+ + Y+G +L + K G + EA LP + YA+L
Sbjct: 362 SMKNEHGISPKTEHYLG--VLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHG 419
Query: 269 DEEALDLFRQL 279
D + D +L
Sbjct: 420 DIDLEDYMEEL 430
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 184 VQMLRSGTEPNEFTF-------ATVXSML-GRQIHSLIIKSNYDAHVYVGSSLLDMYAKD 235
+++L G P+ F A + S+ +++H ++S + + + ++ M+ +
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 236 GKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL 295
I +A+ +F+ + ++D+ S ++ Y+ G+ ++AL LF ++ G++ N T+ +V
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 296 TALSGLASLD----HGKQVHN-HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR-IFDTM 349
A + + ++ H + N H + + Y+ ++ + KCG+L + + I D
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKTEHYL----GVLGVLGKCGHLVEAEQYIRDLP 400
Query: 350 QERTVMSWNAM 360
E T W AM
Sbjct: 401 FEPTADFWEAM 411
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 247/466 (53%), Gaps = 59/466 (12%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G ++H +K+ + V++ T L+ +Y++C A +F+++P ++VV++ A IS +
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 173 RGYASQALNLFVQMLR-SGTEPNEFTFATV----XSML----GRQIHSLIIKSNYDAHVY 223
G + ++F M + S EPN+ TF S+L GRQ+H L++K +
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETM 267
Query: 224 VGSSLLDMYAKDGKIHEARGIFECLPE-RDVVSCTAIISGYAQLGLDEEALDLFRQLRGE 282
VG++L+DMY+K A +F L + R+++S ++ISG G E A++LF +L E
Sbjct: 268 VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSE 327
Query: 283 GMQSNYVTY-----------------------------------ASVLTALSGLASLDHG 307
G++ + T+ S+L+A S + +L +G
Sbjct: 328 GLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNG 387
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT--VMSWNAMLVGYG 365
K++H HV+++ + + SLIDMY KCG +++RRIFD + + + WN M+ GYG
Sbjct: 388 KEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 366 KHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEP 425
KHGE +E+F L+REE +V+P T AVLS CSH G ++G IF M + G +P
Sbjct: 448 KHGECESAIEIFELLREE-KVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE-EYGYKP 505
Query: 426 KKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRL 485
EH GC++DLLGR+GR+ EA E I +M ++ SLLG+C H + +G +L
Sbjct: 506 STEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKL 564
Query: 486 LEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRS 522
E+E N + LS DV S+R ++ +K ++K PG S
Sbjct: 565 AELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 173/331 (52%), Gaps = 12/331 (3%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ LL C + +G+ +HA ++KT + VF T L+ +Y K + DA V DEMP
Sbjct: 34 FPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEMP 93
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-----GRQIHS 211
ER + S A +S + G+ A +F SG+ N T A+V G Q+H
Sbjct: 94 ERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGGMQLHC 153
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG---L 268
L +KS ++ VYVG+SL+ MY++ G+ A +FE +P + VV+ A ISG + G L
Sbjct: 154 LAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNL 213
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+L R+ E + N VT+ + +TA + L +L +G+Q+H V++ E ++ +
Sbjct: 214 VPSVFNLMRKFSSE--EPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTA 271
Query: 329 LIDMYSKCGNLTYSRRIFDTMQE-RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
LIDMYSKC + +F +++ R ++SWN+++ G +G+ +ELF + E +K
Sbjct: 272 LIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG-LK 330
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTS 418
PD T +++SG S G F M S
Sbjct: 331 PDSATWNSLISGFSQLGKVIEAFKFFERMLS 361
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 116/217 (53%), Gaps = 11/217 (5%)
Query: 193 PNEFTFATVXS--------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGI 244
PN+FTF + + GR +H+ ++K+ + V+ ++L+ MY K ++ +A +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 245 FECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASL 304
+ +PER + S A +SG + G +A +F R G N VT ASVL G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVL---GGCGDI 145
Query: 305 DHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGY 364
+ G Q+H ++S V + SL+ MYS+CG + R+F+ + ++V+++NA + G
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
++G V +F LMR+ + +P+ VT + ++ C+
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 105/241 (43%), Gaps = 15/241 (6%)
Query: 94 FKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFD 153
K +LL+ C L+ G+ +H H+IK +F+ T LI +Y KC AR +FD
Sbjct: 368 LKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFD 427
Query: 154 --EMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML------ 205
E ++ V W MIS Y + G A+ +F + EP+ TF V S
Sbjct: 428 RFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNV 487
Query: 206 --GRQIHSLIIKS-NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 262
G QI L+ + Y ++D+ + G++ EA+ + + + E ++++
Sbjct: 488 EKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGS 547
Query: 263 YAQ---LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
Q L EEA +L E + +V +S+ AL ++ +QV + ++
Sbjct: 548 CRQHLDPVLGEEAAMKLAELEPEN-PAPFVILSSIYAALERWEDVESIRQVIDQKQLVKL 606
Query: 320 P 320
P
Sbjct: 607 P 607
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 131/414 (31%), Positives = 218/414 (52%), Gaps = 28/414 (6%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPERNVVS-------WTAMISAYSQRGYASQALNLFVQML 187
L L + C SL R + ++ ++ W ++ +Y + A+ +++ M+
Sbjct: 50 LATLLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMV 109
Query: 188 RSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIH 239
RS P+ ++ V LG+++HS+ ++ + + S + +Y K G+
Sbjct: 110 RSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFE 169
Query: 240 EARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS 299
AR +F+ PER + S AII G G EA+++F ++ G++ + T SV +
Sbjct: 170 NARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG 229
Query: 300 GLASLDHGKQVHNHVL--RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSW 357
GL L Q+H VL ++E S +++ NSLIDMY KCG + + IF+ M++R V+SW
Sbjct: 230 GLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSW 289
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMT 417
++M+VGY +G E LE F MRE V+P+ +T + VLS C HGGL + G ++ M
Sbjct: 290 SSMIVGYAANGNTLEALECFRQMREFG-VRPNKITFVGVLSACVHGGLVEEG-KTYFAMM 347
Query: 418 SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDI 477
+ +EP HYGC+VDLL R G+++EA + +++MP +P +WG L+G C +V++
Sbjct: 348 KSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEM 407
Query: 478 GVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRS 522
+V ++E+E N G Y L+ DV +R +M K V K P S
Sbjct: 408 AEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/292 (32%), Positives = 159/292 (54%), Gaps = 15/292 (5%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G+ +H+ ++ ++ F + I LY K +AR VFDE PER + SW A+I +
Sbjct: 136 GKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNH 195
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR--------QIHSLII--KSNYDAHV 222
G A++A+ +FV M RSG EP++FT +V + G Q+H ++ K+ + +
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 223 YVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE 282
+ +SL+DMY K G++ A IFE + +R+VVS +++I GYA G EAL+ FRQ+R
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 283 GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN--SLIDMYSKCGNLT 340
G++ N +T+ VL+A ++ GK + +++SE L + ++D+ S+ G L
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGK-TYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLK 374
Query: 341 YSRRIFDTMQER-TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
++++ + M + VM W ++ G K G+ E+ E E E DGV
Sbjct: 375 EAKKVVEEMPMKPNVMVWGCLMGGCEKFGD-VEMAEWVAPYMVELEPWNDGV 425
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 233 bits (593), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 145/436 (33%), Positives = 231/436 (52%), Gaps = 22/436 (5%)
Query: 104 CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSW 163
C + +R G VH +++ + V + T + Y KC L AR VF EMPERN VSW
Sbjct: 120 CSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSW 179
Query: 164 TAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDA--- 220
TA++ AY + G +A ++F M E N ++ + L + + K +D
Sbjct: 180 TALVVAYVKSGELEEAKSMFDLM----PERNLGSWNALVDGLVKSGDLVNAKKLFDEMPK 235
Query: 221 -HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
+ +S++D YAK G + AR +FE DV + +A+I GYAQ G EA +F ++
Sbjct: 236 RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 280 RGEGMQSNYVTYASVLTALSGLASLDHGKQVHN--HVLRSEVPSYVVLQNSLIDMYSKCG 337
+ ++ + +++A S + + ++V + H ++ S+ V+ +LIDM +KCG
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVP-ALIDMNAKCG 354
Query: 338 NLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
++ + ++F+ M +R ++S+ +M+ G HG G E + LF M +E V PD V +L
Sbjct: 355 HMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIV-PDEVAFTVIL 413
Query: 398 SGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEP 457
C L + GL ++++ K + +HY C+V+LL R G+++EA+E IK MPFE
Sbjct: 414 KVCGQSRLVEEGLR-YFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEA 472
Query: 458 TAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS---------XDVRSLRD 508
A+ WGSLLG CS+H N +I V L E+E +AG+Y LS DV LRD
Sbjct: 473 HASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRD 532
Query: 509 MMLKKAVMKEPGRSRI 524
M + + K GRS I
Sbjct: 533 KMNENGITKICGRSWI 548
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 165/317 (52%), Gaps = 27/317 (8%)
Query: 151 VFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXSM----- 204
VF+ +P W +I YS + + +++ ++M+R+G P+E+TF V +
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 205 ---LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIIS 261
+G +H L+++ +D V VG+S +D Y K + AR +F +PER+ VS TA++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 262 GYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPS 321
Y + G EEA +F + + N ++ +++ L L + K++ + + + ++ S
Sbjct: 185 AYVKSGELEEAKSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS 240
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMR 381
Y S+ID Y+K G++ +R +F+ + V +W+A+++GY ++G+ E ++F+ M
Sbjct: 241 Y----TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 382 EENEVKPDGVTMLAVLSGCSHGGLED--RGLDIFYDMTSGKIGVEPKKEHY--GCVVDLL 437
+N VKPD M+ ++S CS G + +D + K HY ++D+
Sbjct: 297 AKN-VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKF-----SSHYVVPALIDMN 350
Query: 438 GRAGRVEEAFEFIKKMP 454
+ G ++ A + ++MP
Sbjct: 351 AKCGHMDRAAKLFEEMP 367
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 107/257 (41%), Gaps = 36/257 (14%)
Query: 244 IFECLPERDVVSCTAIISGYAQLGLDEEALD-LFRQLRGEGMQSNYVTYASVLTALSGLA 302
+FE +P +I GY+ L E + L R +R + + T+ V+ S
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 303 SLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLV 362
+ G VH VLR VV+ S +D Y KC +L +R++F M ER +SW A++V
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 363 GYGKHGEGREVLELFTLMREEN--------------------------EVKPDGVTMLAV 396
Y K GE E +F LM E N K D ++ ++
Sbjct: 185 AYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSM 244
Query: 397 LSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM--- 453
+ G + GG D+F + GV+ + + ++ + G+ EAF+ +M
Sbjct: 245 IDGYAKGGDMVSARDLFEEAR----GVDVRA--WSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 454 PFEPTAAIWGSLLGACS 470
+P I L+ ACS
Sbjct: 299 NVKPDEFIMVGLMSACS 315
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 213/405 (52%), Gaps = 34/405 (8%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +L C + EG+++H IK+ + VF+ L+ +Y + AR V D MP
Sbjct: 143 FTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMP 202
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKS 216
R+ VSW +++SAY ++G +A LF +M E F
Sbjct: 203 VRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVESWNF-------------------- 242
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
++ YA G + EA+ +F+ +P RDVVS A+++ YA +G E L++F
Sbjct: 243 -----------MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVF 291
Query: 277 RQLRGEGMQS-NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSK 335
++ + + + T SVL+A + L SL G+ VH ++ + + L +L+DMYSK
Sbjct: 292 NKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSK 351
Query: 336 CGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLA 395
CG + + +F +R V +WN+++ HG G++ LE+F+ M E KP+G+T +
Sbjct: 352 CGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEG-FKPNGITFIG 410
Query: 396 VLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPF 455
VLS C+H G+ D+ +F +M S VEP EHYGC+VDLLGR G++EEA E + ++P
Sbjct: 411 VLSACNHVGMLDQARKLF-EMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPA 469
Query: 456 EPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS 500
+ + + SLLGAC ++ + +RLLE+ ++ Y +S
Sbjct: 470 DEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMS 514
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 130/296 (43%), Gaps = 26/296 (8%)
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGK---IHEARGIFECLPERDVVSCTAIISGY 263
+Q H+ ++K+ + S L+ A + + + A I + + + ++I Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
A E AL +FR++ + + ++ VL A + + G+Q+H ++S + + V
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
++N+L+++Y + G +R++ D M R +SWN++L Y + G E LF M E
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEER 235
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKE--HYGCVVDLLGRAG 441
N + ++SG + GL ++F M P ++ + +V G
Sbjct: 236 NVESWN-----FMISGYAAAGLVKEAKEVFDSM--------PVRDVVSWNAMVTAYAHVG 282
Query: 442 RVEEAFEFIKKMPFEPTAAIWG----SLLGACSVHSNVDIG----VFVGHRLLEIE 489
E E KM + T G S+L AC+ ++ G V++ +EIE
Sbjct: 283 CYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIE 338
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 233/438 (53%), Gaps = 15/438 (3%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
++L C A R G+ +H + IK + T +I +Y KC A F+ +P
Sbjct: 405 TSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPI 464
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQI 209
++ V++ A+ Y+Q G A++A +++ M G P+ T + G +
Sbjct: 465 KDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCV 524
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE-CLPERDVVSCTAIISGYAQLGL 268
+ IIK +D+ +V +L++M+ K + A +F+ C E+ VS +++GY G
Sbjct: 525 YGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQ 584
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
EEA+ FRQ++ E Q N VT+ +++ A + L++L G VH+ +++ S + NS
Sbjct: 585 AEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNS 644
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
L+DMY+KCG + S + F + + ++SWN ML Y HG + LF M +ENE+KP
Sbjct: 645 LVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM-QENELKP 703
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D V+ L+VLS C H GL + G IF +M + +E + EHY C+VDLLG+AG EA E
Sbjct: 704 DSVSFLSVLSACRHAGLVEEGKRIFEEMGE-RHKIEAEVEHYACMVDLLGKAGLFGEAVE 762
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDVRSLRD 508
+++M + + +WG+LL + +H N+ + +L+++E N +Y S D R L +
Sbjct: 763 MMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHY---SQD-RRLGE 818
Query: 509 MMLKKAVMKEPGRSRIEL 526
+ + K P S IE+
Sbjct: 819 VNNVSRIKKVPACSWIEV 836
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 187/370 (50%), Gaps = 17/370 (4%)
Query: 101 LNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNV 160
L C ++G R+H + + V++ T L+ +Y K L AR VFD+M ++V
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166
Query: 161 VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV--------XSMLGRQIHSL 212
V+W M+S +Q G +S AL LF M + + + + S + R +H L
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGL 226
Query: 213 IIKSNYDAHVYVGSS-LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
+IK + ++ SS L+DMY ++ A +FE + +D S +++ YA G EE
Sbjct: 227 VIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEE 283
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
L+LF +R ++ N V AS L A + + L G +H++ ++ + V + SL+
Sbjct: 284 VLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMS 343
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF-TLMREENEVKPDG 390
MYSKCG L + ++F +++R V+SW+AM+ Y + G+ E + LF +MR +KP+
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMR--IHIKPNA 401
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
VT+ +VL GC+ G+ L + K +E + E V+ + + GR A +
Sbjct: 402 VTLTSVLQGCA--GVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAF 459
Query: 451 KKMPFEPTAA 460
+++P + A
Sbjct: 460 ERLPIKDAVA 469
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 179/372 (48%), Gaps = 13/372 (3%)
Query: 116 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGY 175
+H +IK ++ + + LI +Y C L A VF+E+ ++ SW M++AY+ G+
Sbjct: 223 LHGLVIKKGFIFA--FSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGF 280
Query: 176 ASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSS 227
+ L LF M N+ A+ G IH ++ V V +S
Sbjct: 281 FEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATS 340
Query: 228 LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSN 287
L+ MY+K G++ A +F + +RDVVS +A+I+ Y Q G +EA+ LFR + ++ N
Sbjct: 341 LMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPN 400
Query: 288 YVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
VT SVL +G+A+ GK +H + +++++ S + ++I MY+KCG + + + F+
Sbjct: 401 AVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFE 460
Query: 348 TMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLED 407
+ + +++NA+ GY + G+ + +++ M+ V PD TM+ +L C+
Sbjct: 461 RLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHG-VCPDSRTMVGMLQTCAFCSDYA 519
Query: 408 RGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 467
RG ++ + E H ++++ + + A K FE + W ++
Sbjct: 520 RGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMN 577
Query: 468 ACSVHSNVDIGV 479
+H + V
Sbjct: 578 GYLLHGQAEEAV 589
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 148/291 (50%), Gaps = 18/291 (6%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L EC + R L + VH +I + P +LI Y+ +R +FD + +
Sbjct: 11 MLRECKNFRCLLQ---VHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRDPG 63
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQML-RSGTEPNEFTF-----ATVXSM---LGRQIH 210
VV W +MI Y++ G +AL F M G +P++++F A SM G +IH
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIH 123
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
LI + ++ VY+G++L++MY K + AR +F+ + +DVV+ ++SG AQ G
Sbjct: 124 DLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSS 183
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
AL LF +R + ++V+ +++ A+S L D + +H V++ + LI
Sbjct: 184 AALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLI 241
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMR 381
DMY C +L + +F+ + + SW M+ Y +G EVLELF LMR
Sbjct: 242 DMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMR 292
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Query: 289 VTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
+ Y ++L L + QVH ++ S + + N LI+ YS SR IFD+
Sbjct: 3 INYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDS 58
Query: 349 MQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDR 408
+++ V+ WN+M+ GY + G RE L F M EE + PD + L C+ +
Sbjct: 59 VRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKK 118
Query: 409 GLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
GL I +D+ + ++G+E +V++ +A + A + KM + W +++
Sbjct: 119 GLRI-HDLIA-EMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVT-WNTMV 173
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/397 (32%), Positives = 217/397 (54%), Gaps = 10/397 (2%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G +VH IKT Y + + +Y+ + A VF+ + E+++V+W MIS+Y+Q
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSM-----LGRQIHSLIIKSNYDAHVYVGSS 227
A++++ +M G +P+EFTF ++ + + + + IIK + + + ++
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNA 426
Query: 228 LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ-- 285
L+ Y+K+G+I +A +FE ++++S AIISG+ G E L+ F L ++
Sbjct: 427 LISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRIL 486
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRI 345
+ T +++L+ +SL G Q H +VLR ++ N+LI+MYS+CG + S +
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 346 FDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
F+ M E+ V+SWN+++ Y +HGEG + + M++E +V PD T AVLS CSH GL
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL 606
Query: 406 EDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK--KMPFEPTAAIWG 463
+ GL+IF M GV +H+ C+VDLLGRAG ++EA +K + +W
Sbjct: 607 VEEGLEIFNSMVEFH-GVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWW 665
Query: 464 SLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLS 500
+L AC+ H ++ +G V L+E E + Y LS
Sbjct: 666 ALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLS 702
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 202/395 (51%), Gaps = 26/395 (6%)
Query: 90 HDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDAR 149
HD KF G+ +L+ C +L G++VH+ +IK + + + LI +Y C + DA
Sbjct: 188 HD-KF-GFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDAC 244
Query: 150 HVFDE--MPERNVVSWTAMISAYSQRGYA-SQALNLFVQMLRSGTEPNEFTFATVX---- 202
VF+E + R+ V++ +I + G+ ++L +F +ML + P + TF +V
Sbjct: 245 LVFEETDVAVRDQVTFNVVIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS 302
Query: 203 -SMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIIS 261
+ +G Q+H L IK+ Y+ + V ++ + MY+ A +FE L E+D+V+ +IS
Sbjct: 303 CAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMIS 362
Query: 262 GYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL-TALSGLASLDHGKQVHNHVLRSEVP 320
Y Q L + A+ +++++ G++ + T+ S+L T+L LD + V +++ +
Sbjct: 363 SYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL----DLDVLEMVQACIIKFGLS 418
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT-L 379
S + + N+LI YSK G + + +F+ + ++SWNA++ G+ +G E LE F+ L
Sbjct: 419 SKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCL 478
Query: 380 MREENEVKPDGVTMLAVLSGC-SHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG-CVVDLL 437
+ E + PD T+ +LS C S L Y + G+ K+ G ++++
Sbjct: 479 LESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQF----KETLIGNALINMY 534
Query: 438 GRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+ G ++ + E +M E W SL+ A S H
Sbjct: 535 SQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRH 568
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 168/333 (50%), Gaps = 26/333 (7%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVS-WTAMISAYSQRGYASQALNLFVQ 185
P V+ T L+ K + A VFD+MPER+ V+ W AMI+ + GY ++ LF +
Sbjct: 121 PDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFRE 180
Query: 186 MLRSGTEPNEFTFATVXSM-------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKI 238
M + G ++F FAT+ SM G+Q+HSL+IK+ + V ++L+ MY +
Sbjct: 181 MHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 239 HEARGIFE--CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
+A +FE + RD V+ +I G A DE L +FR++ ++ +T+ SV+
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMG 299
Query: 297 ALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS 356
+ S A G QVH +++ Y ++ N+ + MYS + + ++F++++E+ +++
Sbjct: 300 SCSCAA---MGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVT 356
Query: 357 WNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDM 416
WN M+ Y + G+ + ++ M VKPD T ++L+ LD+ +M
Sbjct: 357 WNTMISSYNQAKLGKSAMSVYKRMHIIG-VKPDEFTFGSLLA-------TSLDLDVL-EM 407
Query: 417 TSG---KIGVEPKKEHYGCVVDLLGRAGRVEEA 446
K G+ K E ++ + G++E+A
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKA 440
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 64/107 (59%), Gaps = 1/107 (0%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+ LL+ CVS +L G + HA++++ + LI +Y++C +++++ VF++M E
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSE 552
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSG-TEPNEFTFATVXS 203
++VVSW ++ISAYS+ G A+N + M G P+ TF+ V S
Sbjct: 553 KDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLS 599
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 260 ISGYAQLGLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
++G + G + AL LF + R ++ + + + +T L G QVH + +RS
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT 378
+ + + N+L+ +Y + GNL ++ FD + E V SW +L K G+ E+F
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 379 LMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
M E ++V A+++GC G + +++F +M K+GV K + ++ +
Sbjct: 148 KMPERDDV----AIWNAMITGCKESGYHETSVELFREMH--KLGVRHDKFGFATILSM 199
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/537 (28%), Positives = 260/537 (48%), Gaps = 90/537 (16%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKC-----------DSL 145
+ A+L+ C S ++ G+++ + +I++ + S+ + LI +Y KC D
Sbjct: 73 FTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMC 132
Query: 146 RDARH----------------------VFDEMPERNVVSWTAMISAYSQRGYASQALNLF 183
D+R+ VF EMP+R +W MIS ++ G L+LF
Sbjct: 133 CDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLF 192
Query: 184 VQMLRSGTEPNEFTFATVXS---------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAK 234
+ML S +P+ +TF+++ + + GR +H++++K+ + + V +S+L Y K
Sbjct: 193 KEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTK 252
Query: 235 DG----------------------------KIHE---ARGIFECLPERDVVSCTAIISGY 263
G KI E A +F PE+++V+ T +I+GY
Sbjct: 253 LGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGY 312
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
+ G E+AL F ++ G+ S++ Y +VL A SGLA L HGK +H ++ Y
Sbjct: 313 GRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA 372
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+ N+L+++Y+KCG++ + R F + + ++SWN ML +G HG + L+L+ M
Sbjct: 373 YVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS 432
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG-KIGVEPKKEHYGCVVDLLGRAGR 442
+KPD VT + +L+ CSH GL + G IF M +I +E +H C++D+ GR G
Sbjct: 433 G-IKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEV--DHVTCMIDMFGRGGH 489
Query: 443 VEEAFEFIKK----MPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFF 498
+ EA + + + W +LLGACS H + ++G V L E ++
Sbjct: 490 LAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVL 549
Query: 499 LSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEV 546
LS + +R M+++ + K PG S IE+ + TF D SHPR EE+
Sbjct: 550 LSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEEL 606
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 171/350 (48%), Gaps = 50/350 (14%)
Query: 128 SVFLR-TRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM 186
SV +R T I K + AR VFD MPE + V+W M+++YS+ G +A+ LF Q+
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 187 LRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKI 238
S +P++++F + S GR+I SL+I+S + A + V +SL+DMY K
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDT 121
Query: 239 HEARGIFE--C-------------------------------LPERDVVSCTAIISGYAQ 265
A +F C +P+R + +ISG+A
Sbjct: 122 LSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLAS-LDHGKQVHNHVLRSEVPSYVV 324
G E L LF+++ + + T++S++ A S +S + +G+ VH +L++ S V
Sbjct: 182 CGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVE 241
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
+NS++ Y+K G+ + R ++++ T +SWN+++ K GE + LE+F L E+N
Sbjct: 242 AKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKN 301
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVV 434
VT +++G G ++ L F +M K GV+ YG V+
Sbjct: 302 I-----VTWTTMITGYGRNGDGEQALRFFVEMM--KSGVDSDHFAYGAVL 344
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 137/322 (42%), Gaps = 50/322 (15%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
++M G D Y A+L+ C L G+ +H +I + ++ L+ LY K
Sbjct: 325 FVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAK 384
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
C +++A F ++ +++VSW M+ A+ G A QAL L+ M+ SG +P+ TF
Sbjct: 385 CGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFI-- 442
Query: 202 XSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP-ERDVVSCTAII 260
L+ ++ V G + + KD +I P E D V+C +I
Sbjct: 443 ---------GLLTTCSHSGLVEEGCMIFESMVKDYRI----------PLEVDHVTC--MI 481
Query: 261 SGYAQLGLDEEALDL---FRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR- 316
+ + G EA DL + L + SN ++ ++L A S + G++V + VL+
Sbjct: 482 DMFGRGGHLAEAKDLATTYSSLVTD--SSNNSSWETLLGACSTHWHTELGREV-SKVLKI 538
Query: 317 ---SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV-----MSW-------NAML 361
SE S+V+L N +Y G + M ER + SW + +
Sbjct: 539 AEPSEEMSFVLLSN----LYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFV 594
Query: 362 VGYGKHGEGREVLELFTLMREE 383
VG H E+ E ++ E
Sbjct: 595 VGDSSHPRLEELSETLNCLQHE 616
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/461 (31%), Positives = 233/461 (50%), Gaps = 56/461 (12%)
Query: 116 VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRD---ARHVFDEMPERNVVSWTAMISAYSQ 172
+HAH+++ S L I + C SL + A VF + NV+ + AMI YS
Sbjct: 23 IHAHLLRHFLHGSNLLLAHFISI---CGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSL 79
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYV 224
G ++L+ F M G +E+T+A + G+ +H +I++ + +
Sbjct: 80 VGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKI 139
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVV------------------------------ 254
++++Y G++ +A+ +F+ + ER+VV
Sbjct: 140 RIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI 199
Query: 255 -SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
S ++IS ++ G D EAL+LF ++ +G + T +VL + L LD GK +H+
Sbjct: 200 VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHST 259
Query: 314 VLRSEV-PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
S + ++ + N+L+D Y K G+L + IF MQ R V+SWN ++ G +G+G
Sbjct: 260 AESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEF 319
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
++LF M EE +V P+ T L VL+ CS+ G +RG ++F M + +E + EHYG
Sbjct: 320 GIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMME-RFKLEARTEHYGA 378
Query: 433 VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGN 492
+VDL+ R+GR+ EAF+F+K MP AA+WGSLL AC H +V + L++IE GN
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGN 438
Query: 493 AGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSRI 524
+GNY LS DV +R +M K + K G+S I
Sbjct: 439 SGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 145/316 (45%), Gaps = 43/316 (13%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y LL C S LR G+ VH +I+T + +R ++ LYT + DA+ VFDEM
Sbjct: 105 YAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMS 164
Query: 157 ERNV-------------------------------VSWTAMISAYSQRGYASQALNLFVQ 185
ERNV VSW +MIS+ S+ G +AL LF +
Sbjct: 165 ERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCE 224
Query: 186 MLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSN-YDAHVYVGSSLLDMYAKDG 236
M+ G +P+E T TV + G+ IHS S + + VG++L+D Y K G
Sbjct: 225 MIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSG 284
Query: 237 KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG-MQSNYVTYASVL 295
+ A IF + R+VVS +ISG A G E +DLF + EG + N T+ VL
Sbjct: 285 DLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVL 344
Query: 296 TALSGLASLDHGKQVHNHVL-RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ-ERT 353
S ++ G+++ ++ R ++ + +++D+ S+ G +T + + M
Sbjct: 345 ACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNAN 404
Query: 354 VMSWNAMLVGYGKHGE 369
W ++L HG+
Sbjct: 405 AAMWGSLLSACRSHGD 420
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/447 (30%), Positives = 232/447 (51%), Gaps = 50/447 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+ +L C G H +++ ++ + +++ LI+ + C L A +FD+
Sbjct: 115 FTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSA 174
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKS 216
+ + V+W++M S Y++RG +A+ LF +M P K
Sbjct: 175 KAHKVAWSSMTSGYAKRGKIDEAMRLFDEM------P--------------------YKD 208
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
+V + L K ++ AR +F+ E+DVV+ A+ISGY G +EAL +F
Sbjct: 209 QVAWNVMITGCL-----KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIF 263
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV-----LQNSLID 331
+++R G + VT S+L+A + L L+ GK++H ++L + S + + N+LID
Sbjct: 264 KEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALID 323
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYG-KHGEGREVLELFTLMREENEVKPDG 390
MY+KCG++ + +F +++R + +WN ++VG H EG +E+F M + +V P+
Sbjct: 324 MYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHHAEGS--IEMFEEM-QRLKVWPNE 380
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
VT + V+ CSH G D G ++ + +EP +HYGC+VD+LGRAG++EEAF F+
Sbjct: 381 VTFIGVILACSHSGRVDEGRK-YFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFV 439
Query: 451 KKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX--------- 501
+ M EP A +W +LLGAC ++ NV++G + +LL + +G+Y LS
Sbjct: 440 ESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWD 499
Query: 502 DVRSLRDMMLKKAVMKEPGRSRIELDQ 528
V+ +R M V K G S IE D
Sbjct: 500 GVQKVRKMFDDTRVKKPTGVSLIEEDD 526
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 126/277 (45%), Gaps = 16/277 (5%)
Query: 207 RQIHSLIIKSNYDAHVYVGSSLL--DMYAKDGKIHEARGIFECLPERDVVSCTAIISGYA 264
+QIH+ ++ + +++ V L+ + G + A +F+ +P+ DV C ++ G A
Sbjct: 29 KQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSA 88
Query: 265 QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV 324
Q E+ + L+ ++ G+ + T+ VL A S L +G H V+R
Sbjct: 89 QSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 325 LQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
++N+LI ++ CG+L + +FD + ++W++M GY K G+ E + LF M ++
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKD 208
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
+V + +++GC D ++F T + + ++ G +
Sbjct: 209 QVAWN-----VMITGCLKCKEMDSARELFDRFTEKDVVT------WNAMISGYVNCGYPK 257
Query: 445 EAFEFIKKM---PFEPTAAIWGSLLGACSVHSNVDIG 478
EA K+M P SLL AC+V +++ G
Sbjct: 258 EALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETG 294
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 129/388 (33%), Positives = 212/388 (54%), Gaps = 25/388 (6%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQ 172
G+ +H ++K Y F+ + LI +Y+K + +AR VF ++ E+++V + AMIS Y+
Sbjct: 136 GKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYAN 195
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMY 232
A +ALNL M G +P+ T+ + S + + S +L++
Sbjct: 196 NSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKV-----------SEILELM 244
Query: 233 AKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYA 292
DG + DVVS T+IISG +E+A D F+Q+ G+ N T
Sbjct: 245 CLDGY------------KPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATII 292
Query: 293 SVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER 352
++L A + LA + HGK++H + + + + + ++++L+DMY KCG ++ + +F ++
Sbjct: 293 TLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKK 352
Query: 353 TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
T +++N+M+ Y HG + +ELF M E K D +T A+L+ CSH GL D G ++
Sbjct: 353 TTVTFNSMIFCYANHGLADKAVELFDQMEATGE-KLDHLTFTAILTACSHAGLTDLGQNL 411
Query: 413 FYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
F M + K + P+ EHY C+VDLLGRAG++ EA+E IK M EP +WG+LL AC H
Sbjct: 412 FLLMQN-KYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNH 470
Query: 473 SNVDIGVFVGHRLLEIETGNAGNYFFLS 500
N+++ L E+E N+GN L+
Sbjct: 471 GNMELARIAAKHLAELEPENSGNGLLLT 498
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 143/268 (53%), Gaps = 6/268 (2%)
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQ 265
GR +H+ ++ S + + L+ Y + GK+ +AR +F+ +P+RD+ C +I A+
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
G +E+LD FR++ +G++ + S+L A L + GK +H VL+ S +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
+SLIDMYSK G + +R++F + E+ ++ +NAM+ GY + + E L L M+
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLG- 213
Query: 386 VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
+KPD +T A++SG SH E++ +I M G +P + ++ L + E+
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLD--GYKPDVVSWTSIISGLVHNFQNEK 271
Query: 446 AFEFIKKM---PFEPTAAIWGSLLGACS 470
AF+ K+M P +A +LL AC+
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACT 299
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 57/104 (54%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
LL C + ++ G+ +H + + T F+R+ L+ +Y KC + +A +F + P++
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKT 353
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
V++ +MI Y+ G A +A+ LF QM +G + + TF + +
Sbjct: 354 TVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILT 397
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/361 (33%), Positives = 207/361 (57%), Gaps = 10/361 (2%)
Query: 133 TRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE 192
+ ++ Y+K + +A +F +P+ ++ W MI Y G+ + +NLF M G +
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 193 PNEFTFATVXS--------MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGI 244
PN +T + S ++ +H+ +K N D+H YVG +L++MY++ I A +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 245 FECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASL 304
F + E D+V+C+++I+GY++ G +EAL LF +LR G + + V A VL + + L+
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 305 DHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGY 364
GK+VH++V+R + + + ++LIDMYSKCG L + +F + E+ ++S+N++++G
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVE 424
G HG E FT + E + PD +T A+L C H GL ++G +IF M S + G+E
Sbjct: 385 GLHGFASTAFEKFTEILEMGLI-PDEITFSALLCTCCHSGLLNKGQEIFERMKS-EFGIE 442
Query: 425 PKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHR 484
P+ EHY +V L+G AG++EEAFEF+ + + I G+LL C VH N + V
Sbjct: 443 PQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAEN 502
Query: 485 L 485
+
Sbjct: 503 I 503
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 180/375 (48%), Gaps = 28/375 (7%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
Q++H+ + K++ + T+L Y D L AR +FD PER+V W ++I AY++
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIHSLIIKSNYDAHVYVG 225
+ L+LF Q+LRS T P+ FT+A + R IH + I S G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ 285
S+++ Y+K G I EA +F +P+ D+ +I GY G ++ ++LF ++ G Q
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRI 345
N T ++ + L + L VH L+ + S+ + +L++MYS+C + + +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 346 FDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
F+++ E +++ ++++ GY + G +E L LF +R + KPD V + VL C+
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK-KPDCVLVAIVLGSCAE--- 320
Query: 406 EDRGLDIFYDMTSGK--------IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEP 457
D SGK +G+E + ++D+ + G ++ A +P E
Sbjct: 321 -------LSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP-EK 372
Query: 458 TAAIWGSLLGACSVH 472
+ SL+ +H
Sbjct: 373 NIVSFNSLILGLGLH 387
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 118/230 (51%), Gaps = 8/230 (3%)
Query: 89 GHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDA 148
GH AL + + L VHA +K ++ L+ +Y++C + A
Sbjct: 202 GHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASA 261
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX------ 202
VF+ + E ++V+ +++I+ YS+ G +AL+LF ++ SG +P+ A V
Sbjct: 262 CSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAEL 321
Query: 203 --SMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
S+ G+++HS +I+ + + V S+L+DMY+K G + A +F +PE+++VS ++I
Sbjct: 322 SDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLI 381
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQV 310
G G A + F ++ G+ + +T++++L L+ G+++
Sbjct: 382 LGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 195 EFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVV 254
EFT + +++HS + KS Y + L YA + + AR +F+ PER V
Sbjct: 13 EFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVF 72
Query: 255 SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV 314
+II YA+ L LF Q+ + + TYA + S + +H
Sbjct: 73 LWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIA 132
Query: 315 LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVL 374
+ S + + ++++ YSK G + + ++F ++ + + WN M++GYG G + +
Sbjct: 133 IVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGI 192
Query: 375 ELFTLMREENEVKPDGVTMLAVLSG 399
LF LM+ +P+ TM+A+ SG
Sbjct: 193 NLFNLMQHRGH-QPNCYTMVALTSG 216
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 127/414 (30%), Positives = 214/414 (51%), Gaps = 53/414 (12%)
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNE---FTFA------TVXSMLGRQIH 210
++S T +S+Y+ +G QALNLF+QM S P + F+ A +LG +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
+ +KSN+ ++ +VG +LLDMY K + AR +F+ +P+R+ V A+IS Y G +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 271 EALDLF---------------------------------RQLRGEGMQSNYVTYASVLTA 297
EA++L+ R++ + N +T ++++A
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 298 LSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSW 357
S + + K++H++ R+ + + L++ L++ Y +CG++ Y + +FD+M++R V++W
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAW 251
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMT 417
++++ Y HG+ L+ F M E +V PD + L VL CSH GL D L +++
Sbjct: 252 SSLISAYALHGDAESALKTFQEM-ELAKVTPDDIAFLNVLKACSHAGLADEAL-VYFKRM 309
Query: 418 SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDI 477
G G+ K+HY C+VD+L R GR EEA++ I+ MP +PTA WG+LLGAC + +++
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIEL 369
Query: 478 GVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRS 522
LL +E N NY L + LR M + V PG S
Sbjct: 370 AEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 153/323 (47%), Gaps = 57/323 (17%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++ L C + G VHAH +K+ +L + F+ L+ +Y KC S+ AR +FDE+P
Sbjct: 51 FSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIP 110
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF-ATVXSMLG--------- 206
+RN V W AMIS Y+ G +A+ L+ M PNE +F A + ++G
Sbjct: 111 QRNAVVWNAMISHYTHCGKVKEAVELYEAM---DVMPNESSFNAIIKGLVGTEDGSYRAI 167
Query: 207 ----------------------------------RQIHSLIIKSNYDAHVYVGSSLLDMY 232
++IHS ++ + H + S L++ Y
Sbjct: 168 EFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAY 227
Query: 233 AKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYA 292
+ G I + +F+ + +RDVV+ +++IS YA G E AL F+++ + + + +
Sbjct: 228 GRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFL 287
Query: 293 SVLTALS--GLA--SLDHGKQVH-NHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
+VL A S GLA +L + K++ ++ LR+ Y + L+D+ S+ G + ++
Sbjct: 288 NVLKACSHAGLADEALVYFKRMQGDYGLRASKDHY----SCLVDVLSRVGRFEEAYKVIQ 343
Query: 348 TMQER-TVMSWNAMLVGYGKHGE 369
M E+ T +W A+L +GE
Sbjct: 344 AMPEKPTAKTWGALLGACRNYGE 366
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
AL++ C + A R + +H++ + P L++ L+ Y +C S+ + VFD M +R
Sbjct: 187 ALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDR 246
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX---SMLGRQIHSLI-- 213
+VV+W+++ISAY+ G A AL F +M + P++ F V S G +L+
Sbjct: 247 DVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYF 306
Query: 214 --IKSNYDAHVYVG--SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG----YAQ 265
++ +Y S L+D+ ++ G+ EA + + +PE+ + G Y +
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Query: 266 LGLDEEALDLFRQLRGEGMQSNYV 289
+ L E A + E +NYV
Sbjct: 367 IELAEIAARELLMVEPEN-PANYV 389
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 221 bits (564), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 138/492 (28%), Positives = 246/492 (50%), Gaps = 57/492 (11%)
Query: 109 ALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARH---VFDEMPERNVVSWTA 165
+RE +++HA +IKT + +R VL C S D + VF + +N W
Sbjct: 37 TMRELKQIHASLIKTGLISDTVTASR--VLAFCCASPSDMNYAYLVFTRINHKNPFVWNT 94
Query: 166 MISAYSQRGYASQALNLFVQMLRSG--TEPNEFTFATVXSMLGR--------QIHSLIIK 215
+I +S+ + A+++F+ ML S +P T+ +V GR Q+H ++IK
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 216 SNYDAHVYVGSSLLDMY-------------------------------AKDGKIHEARGI 244
+ ++ +++L MY AK G I +A+ +
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 245 FECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASL 304
F+ +P+R+ VS ++ISG+ + G ++ALD+FR+++ + ++ + T S+L A + L +
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 305 DHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGY 364
+ G+ +H +++R+ ++ +LIDMY KCG + +F+ ++ + WN+M++G
Sbjct: 275 EQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVE 424
+G ++LF+ + E + ++PD V+ + VL+ C+H G R D F+ + K +E
Sbjct: 335 ANNGFEERAMDLFSEL-ERSGLEPDSVSFIGVLTACAHSGEVHRA-DEFFRLMKEKYMIE 392
Query: 425 PKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHR 484
P +HY +V++LG AG +EEA IK MP E IW SLL AC NV++
Sbjct: 393 PSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKC 452
Query: 485 LLEIETGNAGNYFFLSXDVRSL---------RDMMLKKAVMKEPGRSRIELDQVLHTFHA 535
L +++ Y LS S R +M ++ + KE G S IE+D +H F +
Sbjct: 453 LKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFIS 512
Query: 536 SDRSHPRREEVY 547
+HP+ E+Y
Sbjct: 513 CGGTHPKSAEIY 524
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 116/248 (46%), Gaps = 40/248 (16%)
Query: 91 DMKFKGYN--ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDA 148
D+K G+ +LLN C A +G+ +H ++++ R+ + + T LI +Y KC + +
Sbjct: 253 DVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEG 312
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ 208
+VF+ P++ + W +MI + G+ +A++LF ++ RSG EP+ +F V
Sbjct: 313 LNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGV------- 365
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSC-----TAIISGY 263
L A G++H A F + E+ ++ T +++
Sbjct: 366 --------------------LTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVL 405
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR---SEVP 320
GL EEA L + + ++ + V ++S+L+A + +++ K+ + + E
Sbjct: 406 GGAGLLEEAEALIKNMP---VEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETC 462
Query: 321 SYVVLQNS 328
YV+L N+
Sbjct: 463 GYVLLSNA 470
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 138/456 (30%), Positives = 230/456 (50%), Gaps = 51/456 (11%)
Query: 115 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRG 174
R+ ++M++ P + LI Y C + ++R +FD R V+ W +MIS Y
Sbjct: 239 RMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANN 298
Query: 175 YASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGS 226
+AL LF +M R+ T + T A V + G+Q+H K + V S
Sbjct: 299 MKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAS 357
Query: 227 SLLDMYAKDG-------------------------------KIHEARGIFECLPERDVVS 255
+LLDMY+K G +I +A+ +FE + + ++S
Sbjct: 358 TLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLIS 417
Query: 256 CTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
++ +G++Q G E L+ F Q+ + ++ V+ +SV++A + ++SL+ G+QV
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 316 RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLE 375
+ S V+ +SLID+Y KCG + + RR+FDTM + + WN+M+ GY +G+G E ++
Sbjct: 478 IVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAID 537
Query: 376 LFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVD 435
LF M ++P +T + VL+ C++ GL + G +F M G P KEH+ C+VD
Sbjct: 538 LFKKMSVAG-IRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH-GFVPDKEHFSCMVD 595
Query: 436 LLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGN 495
LL RAG VEEA +++MPF+ ++W S+L C + +G +++E+E N+
Sbjct: 596 LLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVA 655
Query: 496 Y------FFLSXDVRS---LRDMMLKKAVMKEPGRS 522
Y F S D S +R +M + V K PG S
Sbjct: 656 YVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 155/345 (44%), Gaps = 68/345 (19%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPS-VFLRTRLIVLYTKCDSLRDARHVFDEM 155
Y LL C S+ ++ + ++K +L S V + L+ +Y++ + AR++FDEM
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIK 215
P+RN SW MI Y G +L F M P +
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM------PE--------------------R 122
Query: 216 SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDL 275
Y +V V +AK G++ AR +F +PE+DVV+ +++ GY G EEAL L
Sbjct: 123 DGYSWNVVVSG-----FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRL 177
Query: 276 FRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSK 335
F++L ++ +T +VL A + L +L GKQ+H +L V + +SL+++Y+K
Sbjct: 178 FKELN---FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAK 234
Query: 336 CGNL-------------------------------TYSRRIFDTMQERTVMSWNAMLVGY 364
CG+L SR +FD R V+ WN+M+ GY
Sbjct: 235 CGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGY 294
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRG 409
+ E L LF MR NE + D T+ AV++ C G + G
Sbjct: 295 IANNMKMEALVLFNEMR--NETREDSRTLAAVINACIGLGFLETG 337
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 183/398 (45%), Gaps = 78/398 (19%)
Query: 139 YTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF 198
+ K L AR +F+ MPE++VV+ +++ Y GYA +AL LF ++ S + T
Sbjct: 134 FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSA---DAITL 190
Query: 199 ATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDG-------------- 236
TV G+QIH+ I+ + + SSL+++YAK G
Sbjct: 191 TTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 237 -----------------KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
+++E+RG+F+ R V+ ++ISGY + EAL LF ++
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM 310
Query: 280 RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV------------------------- 314
R E + + T A+V+ A GL L+ GKQ+H H
Sbjct: 311 RNETREDSR-TLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSP 369
Query: 315 -----LRSEVPSY-VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHG 368
L SEV SY +L NS+I +Y CG + ++R+F+ ++ ++++SWN+M G+ ++G
Sbjct: 370 MEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNG 429
Query: 369 EGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKE 428
E LE F M + ++ D V++ +V+S C+ + G +F T +G++ +
Sbjct: 430 CTVETLEYFHQMHKL-DLPTDEVSLSSVISACASISSLELGEQVFARAT--IVGLDSDQV 486
Query: 429 HYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
++DL + G VE M + W S++
Sbjct: 487 VSSSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMI 523
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 157/346 (45%), Gaps = 46/346 (13%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS-------------- 144
A++N C+ L G+++H H K + + + + L+ +Y+KC S
Sbjct: 323 AVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESY 382
Query: 145 -----------------LRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQML 187
+ DA+ VF+ + ++++SW +M + +SQ G + L F QM
Sbjct: 383 DTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 188 RSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIH 239
+ +E + ++V S LG Q+ + D+ V SSL+D+Y K G +
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 240 EARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS 299
R +F+ + + D V ++ISGYA G EA+DLF+++ G++ +T+ VLTA +
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
Query: 300 GLASLDHGKQVHN--HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS- 356
++ G+++ V VP + ++D+ ++ G + + + + M S
Sbjct: 563 YCGLVEEGRKLFESMKVDHGFVPDKEHF-SCMVDLLARAGYVEEAINLVEEMPFDVDGSM 621
Query: 357 WNAML---VGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG 399
W+++L V G G++ E + EN V ++ + SG
Sbjct: 622 WSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSG 667
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 70/152 (46%), Gaps = 11/152 (7%)
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT 378
+ S V++ N L+ MYS+ G + +R +FD M +R SWN M+ GY GE L F
Sbjct: 58 LSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFD 117
Query: 379 LMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLG 438
+M E DG + V+SG + G +F M + V +G +++
Sbjct: 118 MMPER-----DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDV-VTLNSLLHGYILN--- 168
Query: 439 RAGRVEEAFEFIKKMPFEPTAAIWGSLLGACS 470
G EEA K++ F A ++L AC+
Sbjct: 169 --GYAEEALRLFKELNFSADAITLTTVLKACA 198
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/419 (32%), Positives = 209/419 (49%), Gaps = 44/419 (10%)
Query: 117 HAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYA 176
H + R+ +V +I Y K + AR +FD+M +R+ +SW MI Y
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 177 SQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDG 236
A LF +M PN DAH + + ++ YA G
Sbjct: 329 EDAFALFSEM------PNR-----------------------DAHSW--NMMVSGYASVG 357
Query: 237 KIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
+ AR FE PE+ VS +II+ Y + +EA+DLF ++ EG + + T S+L+
Sbjct: 358 NVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLS 417
Query: 297 ALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ-ERTVM 355
A +GL +L G Q+H V+++ +P V + N+LI MYS+CG + SRRIFD M+ +R V+
Sbjct: 418 ASTGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVI 476
Query: 356 SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
+WNAM+ GY HG E L LF M+ N + P +T ++VL+ C+H GL D F
Sbjct: 477 TWNAMIGGYAFHGNASEALNLFGSMK-SNGIYPSHITFVSVLNACAHAGLVDEAKAQFVS 535
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNV 475
M S +EP+ EHY +V++ G+ EEA I MPFEP +WG+LL AC +++NV
Sbjct: 536 MMS-VYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNV 594
Query: 476 DIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIE 525
+ + +E ++ Y L + +R M K + KE G S ++
Sbjct: 595 GLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 185/398 (46%), Gaps = 49/398 (12%)
Query: 104 CVSKRALREGQRVHAHMIKTRYLPS--VFLRTRLIVLYTKCDSLRDARHVFDEMPERNVV 161
C R L E +++ M PS F +I Y K + +A +F++MPERN V
Sbjct: 115 CGGIRFLEEARKLFDEM------PSRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAV 168
Query: 162 SWTAMISAYSQRGYASQALNLFVQM----------LRSGTEPNEFTFATVXSMLGRQIHS 211
SW+AMI+ + Q G A+ LF +M L +G NE + +LG Q S
Sbjct: 169 SWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNE-RLSEAAWVLG-QYGS 226
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE---------------RDVVSC 256
L+ S + VY ++L+ Y + G++ AR +F+ +P+ ++VVS
Sbjct: 227 LV--SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSW 284
Query: 257 TAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR 316
++I Y ++G A LF Q++ + +++ +++ ++ ++ + + +
Sbjct: 285 NSMIKAYLKVGDVVSARLLFDQMK----DRDTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
Query: 317 SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLEL 376
+ S+ N ++ Y+ GN+ +R F+ E+ +SWN+++ Y K+ + +E ++L
Sbjct: 341 RDAHSW----NMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDL 396
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
F M E E KPD T+ ++LS + GL + L + K V P + ++ +
Sbjct: 397 FIRMNIEGE-KPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVKT-VIPDVPVHNALITM 452
Query: 437 LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSN 474
R G + E+ +M + W +++G + H N
Sbjct: 453 YSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 178/424 (41%), Gaps = 91/424 (21%)
Query: 79 QQPLLQMALCGHD--------MKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVF 130
Q L+ LC + + F+ N LN+ + + E + + K +V
Sbjct: 17 QSSCLKCLLCANSFSTSVSSSLGFRATNKELNQMIRSGYIAEARDIFE---KLEARNTVT 73
Query: 131 LRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRG---YASQALNLFVQML 187
T +I Y K + AR +FD MP+R+VV+W MIS Y G + +A LF +M
Sbjct: 74 WNT-MISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEM- 131
Query: 188 RSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFEC 247
P+ +F+ ++++ YAK+ +I EA +FE
Sbjct: 132 -----PSRDSFS-------------------------WNTMISGYAKNRRIGEALLLFEK 161
Query: 248 LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTAL-SGLAS--- 303
+PER+ VS +A+I+G+ Q G + A+ LFR++ V +S L AL +GL
Sbjct: 162 MPERNAVSWSAMITGFCQNGEVDSAVVLFRKMP--------VKDSSPLCALVAGLIKNER 213
Query: 304 LDHGKQVHNHV--LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE---------- 351
L V L S V N+LI Y + G + +R +FD + +
Sbjct: 214 LSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 352 -----RTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLE 406
+ V+SWN+M+ Y K G+ LF M++ D ++ ++ G H
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR-----DTISWNTMIDGYVHVSRM 328
Query: 407 DRGLDIFYDMTSGKIGVEPKKE--HYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGS 464
+ +F +M P ++ + +V G VE A + +K P + T + W S
Sbjct: 329 EDAFALFSEM--------PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVS-WNS 379
Query: 465 LLGA 468
++ A
Sbjct: 380 IIAA 383
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 75/164 (45%), Gaps = 19/164 (11%)
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
N ++ + G + +R IF+ ++ R ++WN M+ GY K E + +LF +M
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMP----- 98
Query: 387 KPDGVTMLAVLSG-CSHGGLE--DRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAG-- 441
K D VT ++SG S GG+ + +F +M P ++ + + G A
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRFLEEARKLFDEM--------PSRDSFSWNTMISGYAKNR 150
Query: 442 RVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRL 485
R+ EA +KMP E A W +++ + VD V + ++
Sbjct: 151 RIGEALLLFEKMP-ERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 193/317 (60%), Gaps = 9/317 (2%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L C ++ALR G++VH+ ++K VF+ T L+ +Y KC + D R VFD M R
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIH 210
N V+WT++I+A+++ G+ +A++LF M R N T ++ +LG+++H
Sbjct: 349 NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELH 408
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
+ IIK++ + +VY+GS+L+ +Y K G+ +A + + LP RDVVS TA+ISG + LG +
Sbjct: 409 AQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHES 468
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
EALD +++ EG++ N TY+S L A + SL G+ +H+ ++ S V + ++LI
Sbjct: 469 EALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALI 528
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
MY+KCG ++ + R+FD+M E+ ++SW AM++GY ++G RE L+L M E + D
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEG-FEVDD 587
Query: 391 VTMLAVLSGCSHGGLED 407
+LS C L++
Sbjct: 588 YIFATILSTCGDIELDE 604
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/355 (31%), Positives = 185/355 (52%), Gaps = 56/355 (15%)
Query: 90 HDMKFKG---YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLR 146
H ++F + LLN C + G++VH +M+K + ++ + + L+ Y +C L
Sbjct: 177 HGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG-VGNLIVESSLVYFYAQCGELT 235
Query: 147 DARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM-- 204
A FD M E++V+SWTA+ISA S++G+ +A+ +F+ ML PNEFT ++
Sbjct: 236 SALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACS 295
Query: 205 ------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTA 258
GRQ+HSL++K V+VG+SL+DMYAK G+I + R +F+ + R+ V+ T+
Sbjct: 296 EEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTS 355
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
II+ +A+ G EEA+ LFR ++ + +N +T S+L A + +L GK++H ++++
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE---RTVMSWNAMLVGYGKHGEGREVLE 375
+ V + ++L+ +Y KCG SR F+ +Q+ R V+SW A
Sbjct: 416 IEKNVYIGSTLVWLYCKCGE---SRDAFNVLQQLPSRDVVSWTA---------------- 456
Query: 376 LFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
++SGCS G E LD +M + GVEP Y
Sbjct: 457 --------------------MISGCSSLGHESEALDFLKEMI--QEGVEPNPFTY 489
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 198/383 (51%), Gaps = 17/383 (4%)
Query: 99 ALLNECV-SKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
ALL E + S +R +R+HA +K ++ LI + L AR VFD MPE
Sbjct: 86 ALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPE 145
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE-PNEFTFATVXSM--------LGRQ 208
+N V+WTAMI Y + G +A LF ++ G NE F + ++ LGRQ
Sbjct: 146 KNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQ 205
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H ++K ++ V SSL+ YA+ G++ A F+ + E+DV+S TA+IS ++ G
Sbjct: 206 VHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGH 264
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+A+ +F + N T S+L A S +L G+QVH+ V++ + + V + S
Sbjct: 265 GIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTS 324
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
L+DMY+KCG ++ R++FD M R ++W +++ + + G G E + LF +M+ + +
Sbjct: 325 LMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLI-A 383
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG-CVVDLLGRAGRVEEAF 447
+ +T++++L C G G ++ + I K + G +V L + G +AF
Sbjct: 384 NNLTVVSILRACGSVGALLLGKELHAQIIKNSI---EKNVYIGSTLVWLYCKCGESRDAF 440
Query: 448 EFIKKMPFEPTAAIWGSLLGACS 470
++++P + W +++ CS
Sbjct: 441 NVLQQLPSRDVVS-WTAMISGCS 462
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y++ L C + +L G+ +H+ K L +VF+ + LI +Y KC + +A VFD MP
Sbjct: 489 YSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP 548
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG 206
E+N+VSW AMI Y++ G+ +AL L +M G E +++ FAT+ S G
Sbjct: 549 EKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCG 598
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 12/202 (5%)
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRI 345
S V YA + L + K++H L+ + N+LI + G+L Y+R++
Sbjct: 80 SERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKV 139
Query: 346 FDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
FD+M E+ ++W AM+ GY K+G E LF + + + +L+ CS
Sbjct: 140 FDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAE 199
Query: 406 EDRGLDIFYDMTSGKIG---VEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIW 462
+ G + +M +G VE +V + G + A M E W
Sbjct: 200 FELGRQVHGNMVKVGVGNLIVESS------LVYFYAQCGELTSALRAFDMME-EKDVISW 252
Query: 463 GSLLGACSV--HSNVDIGVFVG 482
+++ ACS H IG+F+G
Sbjct: 253 TAVISACSRKGHGIKAIGMFIG 274
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/400 (31%), Positives = 209/400 (52%), Gaps = 45/400 (11%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISA 169
L G+++H +IK + L LI Y KC +L D+R FD + ++N+V W A++S
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG----RQIHSLIIKSNYDAHVYVG 225
Y+ + L+LF+QML+ G P E+TF+T +Q+HS+I++ Y+ + YV
Sbjct: 392 YANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVL 450
Query: 226 SSLLDMYAKD--------------------------------GKIHEARGIFECLPERDV 253
SSL+ YAK+ G+ HE+ + L + D
Sbjct: 451 SSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDT 510
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
VS I+ ++ EE ++LF+ + ++ + T+ S+L+ S L L G +H
Sbjct: 511 VSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGL 570
Query: 314 VLRSEVP-SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
+ +++ + + N LIDMY KCG++ ++F+ +E+ +++W A++ G HG G+E
Sbjct: 571 ITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQE 630
Query: 373 VLELFTLMREENEV--KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
LE F +E + KPD V+ +++L+ C HGG+ G+ +F M GVEP+ +HY
Sbjct: 631 ALEKF---KETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKD--YGVEPEMDHY 685
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACS 470
C VDLL R G ++EA I++MPF A +W + L C+
Sbjct: 686 RCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 176/400 (44%), Gaps = 46/400 (11%)
Query: 110 LREGQRVHAHMIK-TRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
+R G ++H +K ++ F+ T L+ LY + D L A VF++MP +++ +W M+S
Sbjct: 129 VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMS 188
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDA 220
RG+ + + F +++R G E +F V + +Q+H K D
Sbjct: 189 LLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDC 248
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
+ V +SL+ Y K G H A +F+ D+VS AII A+ +AL LF +
Sbjct: 249 EISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMP 308
Query: 281 GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLT 340
G N TY SVL S + L G+Q+H ++++ + +VL N+LID Y+KCGNL
Sbjct: 309 EHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 341 YSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
SR FD ++++ ++ WNA+L GY +G L LF M + +P T L C
Sbjct: 369 DSRLCFDYIRDKNIVCWNALLSGYANK-DGPICLSLFLQMLQMG-FRPTEYTFSTALKSC 426
Query: 401 S------------HGGLEDRGLD------------------IFYDMTSGKIGVEPKKEHY 430
G ED + D SG V P
Sbjct: 427 CVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP----L 482
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACS 470
V + R G+ E+ + I + +P W + ACS
Sbjct: 483 NIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAACS 521
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 175/380 (46%), Gaps = 19/380 (5%)
Query: 99 ALLNECVSKRALREGQRVHAHMIK--TRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
+LLN C + + +HA I + L V++ +I LY K + A VFD+MP
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM------LGRQIH 210
ERN VS+ +I YS+ G +A +F +M G PN+ T + + S G Q+H
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLH 136
Query: 211 SLIIKSN-YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD 269
L +K + A +VG+ LL +Y + + A +FE +P + + + ++S G
Sbjct: 137 GLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFL 196
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
+E + FR+L G ++ VL +S + LD KQ+H + + + + NSL
Sbjct: 197 KECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSL 256
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
I Y KCGN + R+F ++SWNA++ K + L+LF M E P+
Sbjct: 257 ISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHG-FSPN 315
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA--- 446
T ++VL S L G I + K G E ++D + G +E++
Sbjct: 316 QGTYVSVLGVSSLVQLLSCGRQIHGMLI--KNGCETGIVLGNALIDFYAKCGNLEDSRLC 373
Query: 447 FEFIKKMPFEPTAAIWGSLL 466
F++I+ + W +LL
Sbjct: 374 FDYIR----DKNIVCWNALL 389
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 183/404 (45%), Gaps = 58/404 (14%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+++H K + + LI Y KC + A +F + ++VSW A+I A ++
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVG 225
+AL LFV M G PN+ T+ +V + GRQIH ++IK+ + + +G
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLG 354
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ 285
++L+D YAK G + ++R F+ + ++++V A++SGYA L LF Q+ G +
Sbjct: 355 NALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFR 413
Query: 286 SNYVTYASVL-----TALSGLASL--DHGKQVHNHVLRSEVPSY---------------- 322
T+++ L T L L S+ G + +++VL S + SY
Sbjct: 414 PTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWA 473
Query: 323 -----VVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELF 377
VV N + +YS+ G S ++ T+++ +SWN + + EV+ELF
Sbjct: 474 SGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELF 533
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG-KIGVEPKKEHYGC---- 432
M + N ++PD T +++LS CS D+T G I K + C
Sbjct: 534 KHMLQSN-IRPDKYTFVSILSLCSK----------LCDLTLGSSIHGLITKTDFSCADTF 582
Query: 433 ----VVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
++D+ G+ G + + ++ E W +L+ +H
Sbjct: 583 VCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIH 625
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRY-LPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
+ ++L+ C L G +H + KT + F+ LI +Y KC S+R VF+E
Sbjct: 548 FVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET 607
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
E+N+++WTA+IS GY +AL F + L G +P+ +F ++ +
Sbjct: 608 REKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILT 655
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/463 (28%), Positives = 243/463 (52%), Gaps = 23/463 (4%)
Query: 83 LQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRY-LPSVFLRTRLIVLYTK 141
L+M L G Y ++ C R + EG+++H+ ++K+ + + ++F+ L+ Y+
Sbjct: 202 LRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSA 261
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
C L + F+ +PE++V+SW +++S + G +L+LF +M G P+ F +
Sbjct: 262 CGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSF 321
Query: 202 XSML--------GRQIHSLIIKSNYD-AHVYVGSSLLDMYAKDGKIHEARGIFECLPERD 252
+ G+QIH ++K +D + ++V S+L+DMY K I + +++ LP +
Sbjct: 322 LNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLN 381
Query: 253 VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL--ASLDHGKQV 310
+ C ++++ G+ ++ +++F + EG + VT ++VL ALS SL V
Sbjct: 382 LECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLV 441
Query: 311 HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEG 370
H ++S + V + SLID Y+K G SR++FD + + +++ GY ++G G
Sbjct: 442 HCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMG 501
Query: 371 REVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
+ +++ M N + PD VT+L+VLSGCSH GL + G ++ +D K G+ P ++ Y
Sbjct: 502 TDCVKMLREMDRMNLI-PDEVTILSVLSGCSHSGLVEEG-ELIFDSLESKYGISPGRKLY 559
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIET 490
C+VDLLGRAG VE+A + + + W SLL +C +H N IG L+ +E
Sbjct: 560 ACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEP 619
Query: 491 GN------AGNYFFLSXDV---RSLRDMMLKKAVMKEPGRSRI 524
N ++F D R +R++ + +M+E G S +
Sbjct: 620 ENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGYSSV 662
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 172/329 (52%), Gaps = 13/329 (3%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M CG + ++L+ C + REG +VH +I + ++F+R+ L+ LY C
Sbjct: 102 EMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CL 160
Query: 144 SLRD-ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX 202
L D A +FDEM +RN+ ++ + Q G + + ++++M G N T+ +
Sbjct: 161 RLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMI 220
Query: 203 SML--------GRQIHSLIIKSNYD-AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
G+Q+HSL++KS ++ ++++V + L+D Y+ G + + F +PE+DV
Sbjct: 221 RGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDV 280
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
+S +I+S A G ++LDLF +++ G + + + S L S + + GKQ+H +
Sbjct: 281 ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY 340
Query: 314 VLRSEVP-SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
VL+ S + +Q++LIDMY KC + S ++ ++ + N+++ G ++
Sbjct: 341 VLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCS 401
++E+F LM +E D VT+ VL S
Sbjct: 401 IIEMFGLMIDEG-TGIDEVTLSTVLKALS 428
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 170/336 (50%), Gaps = 13/336 (3%)
Query: 129 VFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLR 188
V+ R I K +L A FDEM R+VV++ +IS S+ G + +A+ L+ +M+
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 189 SGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE 240
G + TF +V S+ G Q+H +I + +++V S+L+ +YA +
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 241 ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSG 300
A +F+ + +R++ C ++ + Q G + +++ ++ EG+ N +TY ++ S
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 301 LASLDHGKQVHNHVLRSEVP-SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNA 359
+ GKQ+H+ V++S S + + N L+D YS CG+L+ S R F+ + E+ V+SWN+
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG 419
++ +G + L+LF+ M+ + +P ++ L+ CS G I +
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGK-RPSIRPFMSFLNFCSRNSDIQSGKQIHCYVL-- 342
Query: 420 KIGVEPKKEHY-GCVVDLLGRAGRVEEAFEFIKKMP 454
K+G + H ++D+ G+ +E + + +P
Sbjct: 343 KMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 34/305 (11%)
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
R S ++ N VY + +D K G + A F+ + RDVV+ +ISG ++
Sbjct: 31 RMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRY 90
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G A++L+ ++ G++ + T+ SVL+ S G QVH V+ + ++
Sbjct: 91 GCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVR 150
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
++L+ +Y+ + + ++FD M +R + N +L + + GE + + E++ M E V
Sbjct: 151 SALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEG-V 209
Query: 387 KPDGVTMLAVLSGCSHGGLEDRG-------------------LDIFYDMTSG-------- 419
+G+T ++ GCSH L G ++ D S
Sbjct: 210 AKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSM 269
Query: 420 -KIGVEPKKE--HYGCVVDLLGRAGRVEEAFEFIKKMPF---EPTAAIWGSLLGACSVHS 473
P+K+ + +V + G V ++ + KM F P+ + S L CS +S
Sbjct: 270 RSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNS 329
Query: 474 NVDIG 478
++ G
Sbjct: 330 DIQSG 334
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 215 bits (547), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 149/466 (31%), Positives = 235/466 (50%), Gaps = 33/466 (7%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
LQ+ D+ + +L C G++VHA MIK +T LI +Y+K
Sbjct: 72 FLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSK 131
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
L D+ VF+ + E+++VSW A++S + + G +AL +F M R E +EFT ++V
Sbjct: 132 YGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSV 191
Query: 202 XSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP-ERD 252
G+Q+H++++ + D V +G++++ Y+ G I+EA ++ L D
Sbjct: 192 VKTCASLKILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTD 250
Query: 253 VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN 312
V ++ISG + +EA L + R N +S L S + L GKQ+H
Sbjct: 251 EVMLNSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGKQIHC 305
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
LR+ S L N L+DMY KCG + +R IF + ++V+SW +M+ Y +G+G +
Sbjct: 306 VALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVK 365
Query: 373 VLELFTLMREENE-VKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG 431
LE+F M EE V P+ VT L V+S C+H GL G + F M K + P EHY
Sbjct: 366 ALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECF-GMMKEKYRLVPGTEHYV 424
Query: 432 CVVDLLGRAGRVEEAFEFIKKMPFEPT----AAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
C +D+L +AG EE + +++M AIW ++L ACS++ ++ G +V RL+E
Sbjct: 425 CFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLME 484
Query: 488 IETG--NAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRS 522
ETG NA Y +S V LR + K ++K G S
Sbjct: 485 -ETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 186/351 (52%), Gaps = 25/351 (7%)
Query: 138 LYTKCDSLRD----ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEP 193
L +C +R+ A H+FDE+P+R++ S + +S++ + G + L LF+Q+ R+ +
Sbjct: 23 LVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDL 82
Query: 194 NEFTFATVX---SML-----GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIF 245
+ TF V S+L GRQ+H+L+IK + ++L+DMY+K G + ++ +F
Sbjct: 83 SSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVF 142
Query: 246 ECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLD 305
E + E+D+VS A++SG+ + G +EAL +F + E ++ + T +SV+ + L L
Sbjct: 143 ESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQ 202
Query: 306 HGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT--VMSWNAMLVG 363
GKQVH V+ + VVL ++I YS G + + ++++++ T VM N+++ G
Sbjct: 203 QGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVM-LNSLISG 260
Query: 364 YGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGV 423
++ R E F LM + +P+ + + L+GCS D + + + G
Sbjct: 261 CIRN---RNYKEAFLLMSRQ---RPNVRVLSSSLAGCSDN--SDLWIGKQIHCVALRNGF 312
Query: 424 EPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSN 474
+ ++D+ G+ G++ +A + +P + + W S++ A +V+ +
Sbjct: 313 VSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVS-WTSMIDAYAVNGD 362
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/478 (29%), Positives = 236/478 (49%), Gaps = 28/478 (5%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRY-LPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++L C + G+ VH I+ + L VF+ LI +Y+K + A VFDE
Sbjct: 230 TSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQ 208
RN+VSW ++++ + +AL +F M++ E +E T ++ + +
Sbjct: 290 CRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 349
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
IH +II+ Y+++ SSL+D Y + +A + + + +DVVSC+ +ISG A G
Sbjct: 350 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 409
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP-SYVVLQN 327
+EA+ +F +R N +T S+L A S A L K H +R + + + +
Sbjct: 410 SDEAISIFCHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGT 466
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
S++D Y+KCG + +RR FD + E+ ++SW ++ Y +G + L LF M+++
Sbjct: 467 SIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKG-YT 525
Query: 388 PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
P+ VT LA LS C+HGGL +GL IF M +P +HY C+VD+L RAG ++ A
Sbjct: 526 PNAVTYLAALSACNHGGLVKKGLMIFKSMVEED--HKPSLQHYSCIVDMLSRAGEIDTAV 583
Query: 448 EFIKKMP--FEPTAAIWGSLLGAC-SVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX--- 501
E IK +P + A+ WG++L C + + I V +LE+E + Y S
Sbjct: 584 ELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFA 643
Query: 502 ------DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKEL 553
DV +R ++ ++ V G S + + F A D+ E+ V+ L
Sbjct: 644 AEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 160/300 (53%), Gaps = 15/300 (5%)
Query: 112 EGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYS 171
+G+++H ++I++ + ++ ++ +Y DSL AR +FDEM ER+V+SW+ +I +Y
Sbjct: 143 DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SARKLFDEMSERDVISWSVVIRSYV 201
Query: 172 QRGYASQALNLFVQML-RSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYD-AH 221
Q L LF +M+ + TEP+ T +V +GR +H I+ +D A
Sbjct: 202 QSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLAD 261
Query: 222 VYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
V+V +SL+DMY+K + A +F+ R++VS +I++G+ +EAL++F +
Sbjct: 262 VFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQ 321
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
E ++ + VT S+L K +H ++R S V +SLID Y+ C +
Sbjct: 322 EAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDD 381
Query: 342 SRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ + D+M + V+S + M+ G G E + +F MR+ P+ +T++++L+ CS
Sbjct: 382 AGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD----TPNAITVISLLNACS 437
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 116/387 (29%), Positives = 177/387 (45%), Gaps = 39/387 (10%)
Query: 126 LPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQ 185
L +F + Y KC L FD M R+ VSW ++ G+ + L F +
Sbjct: 58 LSWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSK 117
Query: 186 MLRSGTEPNEFTFATVXSML------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIH 239
+ G EPN T V G +IH +I+S + V +S+L MYA D
Sbjct: 118 LRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYA-DSDSL 176
Query: 240 EARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG-MQSNYVTYASVLTAL 298
AR +F+ + ERDV+S + +I Y Q L LF+++ E + + VT SVL A
Sbjct: 177 SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKAC 236
Query: 299 SGLASLDHGKQVHNHVLRSEVP-SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSW 357
+ + +D G+ VH +R + V + NSLIDMYSK ++ + R+FD R ++SW
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS-----------HGGLE 406
N++L G+ + E LE+F LM +E V+ D VT++++L C HG +
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQE-AVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 407 DRG-----------LDIF-----YDMTSGKIGVEPKKEHYGC--VVDLLGRAGRVEEAFE 448
RG +D + D + K+ C ++ L AGR +EA
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNV 475
M P A SLL ACSV +++
Sbjct: 416 IFCHMRDTPNAITVISLLNACSVSADL 442
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 141/473 (29%), Positives = 237/473 (50%), Gaps = 53/473 (11%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK----------------- 141
++L C + +G+ +HA +K V+++T L+ LY++
Sbjct: 109 SVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEK 168
Query: 142 --------------CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQM- 186
L +AR VFD++PE++ VSW +IS+Y+++G A +LF M
Sbjct: 169 NTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMP 228
Query: 187 LRSGTEPNEFTFATVXS---MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARG 243
L+S N V L R + + N + + +++ Y K G + A
Sbjct: 229 LKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWI----TMISGYTKLGDVQSAEE 284
Query: 244 IFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL--RGEGMQSNYVTYASVLTALSGL 301
+F + ++D + A+I+ Y Q G ++AL LF Q+ R +Q + +T +SV++A S L
Sbjct: 285 LFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQL 344
Query: 302 ASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAML 361
+ G V +++ + +L SLID+Y K G+ + ++F + ++ +S++AM+
Sbjct: 345 GNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMI 404
Query: 362 VGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI 421
+G G +G E LFT M E+ ++ P+ VT +LS SH GL G F M +
Sbjct: 405 MGCGINGMATEANSLFTAMIEK-KIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNL 463
Query: 422 GVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFV 481
EP +HYG +VD+LGRAGR+EEA+E IK MP +P A +WG+LL A +H+NV+ G
Sbjct: 464 --EPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIA 521
Query: 482 GHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIE 525
+++ET G L+ D R++RD + +K + K G S +E
Sbjct: 522 CSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 158/363 (43%), Gaps = 43/363 (11%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRY--LPSVFLR---------TRLIVLYTKCDSLRDA 148
L CV L + ++VHA ++ RY L + + +R IV Y K
Sbjct: 9 FLQRCV---VLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVK------- 58
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ 208
+ + SW ++ SQ + +++++ M SG P+ +V G+
Sbjct: 59 -RILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 209 --------IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
IH+ +K+ VYV + L+ +Y++ G I A+ F+ + E++ VS +++
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP 320
GY + G +EA +F ++ + + V++ ++++ + + + + + +
Sbjct: 178 HGYLESGELDEARRVFDKIP----EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLM 380
S+ N LI Y C + +R FD M ++ +SW M+ GY K G+ + ELF LM
Sbjct: 234 SW----NILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLM 289
Query: 381 REENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRA 440
+++++ D A+++ + G L +F M ++P + VV +
Sbjct: 290 SKKDKLVYD-----AMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQL 344
Query: 441 GRV 443
G
Sbjct: 345 GNT 347
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 210/429 (48%), Gaps = 43/429 (10%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE--- 154
++++ C AL G+ +HA +K + + T + +Y KCD L AR VFD+
Sbjct: 267 SSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRS 326
Query: 155 ----------------------------MPERNVVSWTAMISAYSQRGYASQALNLFVQM 186
MPERN+VSW AM+ Y +AL+ M
Sbjct: 327 KDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLM 386
Query: 187 LRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKI 238
+ + T + ++ +G+Q H I + YD +V V ++LLDMY K G +
Sbjct: 387 RQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTL 446
Query: 239 HEARGIFECLPE-RDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA 297
A F + E RD VS A+++G A++G E+AL F ++ E S Y T A++L
Sbjct: 447 QSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKY-TLATLLAG 505
Query: 298 LSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSW 357
+ + +L+ GK +H ++R VV++ +++DMYSKC Y+ +F R ++ W
Sbjct: 506 CANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILW 565
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMT 417
N+++ G ++G +EV ELF L+ E VKPD VT L +L C G + G F M+
Sbjct: 566 NSIIRGCCRNGRSKEVFELFMLLENEG-VKPDHVTFLGILQACIREGHVELGFQYFSSMS 624
Query: 418 SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDI 477
+ K + P+ EHY C+++L + G + + EF+ MPF+P + + AC + +
Sbjct: 625 T-KYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKL 683
Query: 478 GVFVGHRLL 486
G + RL+
Sbjct: 684 GAWAAKRLM 692
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/454 (29%), Positives = 213/454 (46%), Gaps = 74/454 (16%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y L C SK + + ++V +H++ LP +FL R I Y KC + DAR +F+EMP
Sbjct: 64 YERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP 123
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQ 208
ER+ SW A+I+A +Q G + + +F +M R G E +FA V G RQ
Sbjct: 124 ERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H ++K Y +V + +S++D+Y K + +AR +F+ + VS I+ Y ++G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
++EA+ +F ++ ++ T +SV+ A S +L+ GK +H ++ V + V+ S
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 329 LIDMYSKCGNLTYSRRIFDT-------------------------------MQERTVMSW 357
+ DMY KC L +RR+FD M ER ++SW
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS-----------HGGLE 406
NAML GY E E L+ TLMR+E E D VT++ +L+ CS HG +
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIE-NIDNVTLVWILNVCSGISDVQMGKQAHGFIY 422
Query: 407 DRGLDI-------FYDMTSGKIGV------------EPKKE-HYGCVVDLLGRAGRVEEA 446
G D DM GK G E + E + ++ + R GR E+A
Sbjct: 423 RHGYDTNVIVANALLDMY-GKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQA 481
Query: 447 FEFIKKMPFE--PTAAIWGSLLGACSVHSNVDIG 478
F + M E P+ +LL C+ +++G
Sbjct: 482 LSFFEGMQVEAKPSKYTLATLLAGCANIPALNLG 515
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 287 NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
+Y Y + + S A + ++V +H++ + L N I+ Y KCG + +R +F
Sbjct: 60 SYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELF 119
Query: 347 DTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
+ M ER SWNA++ ++G EV +F M + V+ + VL C
Sbjct: 120 EEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDG-VRATETSFAGVLKSC 172
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 135/447 (30%), Positives = 221/447 (49%), Gaps = 42/447 (9%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE- 157
A+L C S +L G+ VH + K L S FLR + M E
Sbjct: 502 AILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLR-------------------LETMSET 542
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT--FATVXS-------MLGRQ 208
R++ SW ++IS + G+ ++L F M R G ++ T+ + + GR
Sbjct: 543 RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRC 602
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
H L IKS + + ++L+ MY + I A +F + + ++ S +IS +Q
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
E LFR L+ ++ N +T+ +L+A + L S +G Q H H++R + + +
Sbjct: 663 GREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAA 719
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
L+DMYS CG L ++F ++ +WN+++ +G HG G + +ELF + +E++P
Sbjct: 720 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
+ + +++LS CSH G D GL +Y K GV+P EH +VD+LGRAG++ EA+E
Sbjct: 780 NKSSFISLLSACSHSGFIDEGLS-YYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYE 838
Query: 449 FIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX------- 501
FI + A +WG+LL AC+ H + +G V L E+E NA Y L+
Sbjct: 839 FITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGG 898
Query: 502 --DVRSLRDMMLKKAVMKEPGRSRIEL 526
+ LR M+ A+ K PG S I++
Sbjct: 899 WEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/303 (33%), Positives = 163/303 (53%), Gaps = 13/303 (4%)
Query: 111 REGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAY 170
R+ +H I+T + L L+ LY K ++L A VF M R++VSW +++
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKC 264
Query: 171 SQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSNY--DA 220
G+ ++L F M SG E + TF+ V S LG +H L+IKS Y +A
Sbjct: 265 LANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEA 324
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
HV VG+S++ MY+K G A +FE L RDV+S AI++G+A G+ EEA + Q++
Sbjct: 325 HVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQ 384
Query: 281 G-EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVV-LQNSLIDMYSKCGN 338
+ +Q + T S+ + L+ G+ VH + +R E+ S + + NS+IDMY KCG
Sbjct: 385 SVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGL 444
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFT-LMREENEVKPDGVTMLAVL 397
T + +F T R ++SWN+M+ + ++G + LF ++ E + K T+LA+L
Sbjct: 445 TTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAIL 504
Query: 398 SGC 400
+ C
Sbjct: 505 TSC 507
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 184/372 (49%), Gaps = 22/372 (5%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+ VH +K L + ++L+ Y + L + +FDE+ E++V+ W +MI+A +Q
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIHSLIIKSNYDAHVYVG 225
G A+ LF++M+ G E + T S L +H L I++ +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ 285
++L+++YAK + A +F + RD+VS I++ G ++L F+ + G G +
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRS--EVPSYVVLQNSLIDMYSKCGNLTYSR 343
++ VT++ V++A S + L G+ +H V++S ++V + NS+I MYSKCG+ +
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 344 RIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC--- 400
+F+ + R V+S NA+L G+ +G E + M+ ++++PD T++++ S C
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 401 --SHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPT 458
S G G + +M S + E V+D+ G+ G +A E + K
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRAL------EVINSVIDMYGKCGLTTQA-ELLFKTTTHRD 459
Query: 459 AAIWGSLLGACS 470
W S++ A S
Sbjct: 460 LVSWNSMISAFS 471
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 185/433 (42%), Gaps = 63/433 (14%)
Query: 80 QPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPS--VFLRTRLIV 137
Q M G + ++ +++ C S L G+ +H +IK+ Y P V + +I
Sbjct: 275 QYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIIS 334
Query: 138 LYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLR-SGTEPNEF 196
+Y+KC A VF+E+ R+V+S A+++ ++ G +A + QM +P+
Sbjct: 335 MYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIA 394
Query: 197 TFATVXSML--------GRQIHSLIIKSNYDAHVY-VGSSLLDMYAKDGKIHEARGIFEC 247
T ++ S+ GR +H ++ + V +S++DMY K G +A +F+
Sbjct: 395 TVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT 454
Query: 248 LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNY--VTYASVLTALSGLASLD 305
RD+VS ++IS ++Q G +A +LF+++ E S + T ++LT+ SL
Sbjct: 455 TTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLI 514
Query: 306 HGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE-RTVMSWNAMLVGY 364
GK VH LQ K G+LT + +TM E R + SWN+++ G
Sbjct: 515 FGKSVH-----------CWLQ--------KLGDLTSAFLRLETMSETRDLTSWNSVISGC 555
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG-----------CSHG---------- 403
G E L F M E +++ D +T+L +S C HG
Sbjct: 556 ASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELD 615
Query: 404 --------GLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPF 455
+ R DI + + +P + CV+ L + E F+ + +
Sbjct: 616 TQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKL 675
Query: 456 EPTAAIWGSLLGA 468
EP + LL A
Sbjct: 676 EPNEITFVGLLSA 688
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 214 bits (545), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 208/346 (60%), Gaps = 17/346 (4%)
Query: 203 SMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER-DVVSCTAIIS 261
S+ GRQIH+L+ K ++A + + +SL+ Y+ G + AR +F+ PE+ ++V TA+IS
Sbjct: 81 SLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMIS 140
Query: 262 GYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE--V 319
Y + EA++LF+++ E ++ + V L+A + L ++ G+++++ ++ + +
Sbjct: 141 AYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRL 200
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTL 379
+ L+NSL++MY K G +R++FD + V ++ +M+ GY +G+ +E LELF
Sbjct: 201 AMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKK 260
Query: 380 MR-----EENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVV 434
M+ ++ + P+ VT + VL CSH GL + G F M ++P++ H+GC+V
Sbjct: 261 MKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIM-DYNLKPREAHFGCMV 319
Query: 435 DLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAG 494
DL R+G +++A EFI +MP +P IW +LLGACS+H NV++G V R+ E++ + G
Sbjct: 320 DLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVG 379
Query: 495 NYFFLSXDVRSLRDMMLKKAVMKE-------PGRSRIELDQVLHTF 533
+Y LS ++ + + M +K+ M++ PG+S IEL +++ F
Sbjct: 380 DYVALS-NIYASKGMWDEKSKMRDRVRKRRMPGKSWIELGSIINEF 424
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 150/299 (50%), Gaps = 33/299 (11%)
Query: 112 EGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER-NVVSWTAMISAY 170
+G+++HA + K + + ++T L+ Y+ + AR VFDE PE+ N+V WTAMISAY
Sbjct: 83 DGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAY 142
Query: 171 SQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------MLGRQIHSLIIKSN--YDA 220
++ + +A+ LF +M E + S +G +I+S IK
Sbjct: 143 TENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAM 202
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
+ + +SLL+MY K G+ +AR +F+ +DV + T++I GYA G +E+L+LF++++
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 281 ------GEGMQSNYVTYASVLTALSGLASLDHGKQ-----VHNHVLRSEVPSYVVLQNSL 329
+ N VT+ VL A S ++ GK+ + ++ L+ + +
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHF----GCM 318
Query: 330 IDMYSKCGNLTYSRRIFDTM--QERTVMSWNAMLVGYGKHGE---GREVL-ELFTLMRE 382
+D++ + G+L + + M + TV+ W +L HG G EV +F L R+
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIKPNTVI-WRTLLGACSLHGNVELGEEVQRRIFELDRD 376
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 72/126 (57%), Gaps = 3/126 (2%)
Query: 289 VTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD- 347
V +A +++ +SLD G+Q+H V + + + +Q SL+ YS G++ Y+R++FD
Sbjct: 67 VLFAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDE 125
Query: 348 TMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLED 407
T +++ ++ W AM+ Y ++ E +ELF M E +++ DGV + LS C+ G
Sbjct: 126 TPEKQNIVLWTAMISAYTENENSVEAIELFKRM-EAEKIELDGVIVTVALSACADLGAVQ 184
Query: 408 RGLDIF 413
G +I+
Sbjct: 185 MGEEIY 190
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 111/279 (39%), Gaps = 60/279 (21%)
Query: 101 LNECVSKRALREGQRVHAHMIKT--RYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
L+ C A++ G+ +++ IK R + LR L+ +Y K AR +FDE +
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLR------SGTEPNEFTFATVXSMLG------ 206
+V ++T+MI Y+ G A ++L LF +M + PN+ TF V
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 207 ---RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
R S+I+ N ++D++ + G + +A +P
Sbjct: 294 EGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMP-------------- 339
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL---RSEVP 320
++ N V + ++L A S +++ G++V + R V
Sbjct: 340 --------------------IKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVG 379
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV--MSW 357
YV L N +Y+ G ++ D +++R + SW
Sbjct: 380 DYVALSN----IYASKGMWDEKSKMRDRVRKRRMPGKSW 414
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 236/453 (52%), Gaps = 53/453 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +++ C + G+ VH + + + ++++ LI +Y + + AR +FD M
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX-------------- 202
ER+ VSW A+I+ Y+ +A L +M SG E + T+ T+
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 203 ---------------SML--------------GRQIHSLIIKSNYDAHVY--VGSSLLDM 231
+M+ G+ H L+I+S +H V +SL+ M
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 232 YAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTY 291
Y++ + A +F+ + + + +IISG+A EE L +++ G N++T
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSY---VVLQNSLIDMYSKCGNLTYSRRIFDT 348
AS+L + + +L HGK+ H ++LR + SY ++L NSL+DMY+K G + ++R+FD+
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQ--SYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 349 MQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDR 408
M++R +++ +++ GYG+ G+G L F M + + +KPD VTM+AVLS CSH L
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM-DRSGIKPDHVTMVAVLSACSHSNLVRE 543
Query: 409 GLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
G +F M G+ + EHY C+VDL RAG +++A + +P+EP++A+ +LL A
Sbjct: 544 GHWLFTKMEH-VFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKA 602
Query: 469 CSVHSNVDIGVFVGHR-LLEIETGNAGNYFFLS 500
C +H N +IG + + LLE + + G+Y L+
Sbjct: 603 CLIHGNTNIGEWAADKLLLETKPEHLGHYMLLA 635
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 209/483 (43%), Gaps = 83/483 (17%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
LL+ H+ +LL+ CV GQ++HAH I + L +L+ Y+
Sbjct: 71 LLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSA 130
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
+ L +A+ + + + + W +I +Y + ++++++ +M+ G +EFT+ +V
Sbjct: 131 FNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSV 190
Query: 202 XSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
GR +H I S++ ++YV ++L+ MY + GK+ AR +F+ + ERD
Sbjct: 191 IKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDA 250
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASV------------------- 294
VS AII+ Y EA L ++ G++++ VT+ ++
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVG 310
Query: 295 ----------------LTALSGLASLDHGKQVHNHVLRSEVPSYVV--LQNSLIDMYSKC 336
L A S + +L GK H V+RS S+ + ++NSLI MYS+C
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
+L ++ +F ++ ++ +WN+++ G+ + E L M P+ +T+ ++
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASI 429
Query: 397 LSGCSHGGLEDRGLDI-------------------FYDM--TSGKIGVEPK--------- 426
L + G G + DM SG+I +
Sbjct: 430 LPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRD 489
Query: 427 KEHYGCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIWGSLLGACSVHSNVDIGVFVGH 483
K Y ++D GR G+ E A + K M +P ++L ACS HSN+ V GH
Sbjct: 490 KVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS-HSNL---VREGH 545
Query: 484 RLL 486
L
Sbjct: 546 WLF 548
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 19/245 (7%)
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSML-----------GRQIHSLIIKSNYDAHV 222
G +A F +LR + +EF + S+L G+Q+H+ I S +
Sbjct: 60 GQLYEAFRTF-SLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 223 YVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE 282
+ L+ Y+ + EA+ I E + +I Y + +E++ +++++ +
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 283 GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYS 342
G++++ TY SV+ A + L +G+ VH + S + + N+LI MY + G + +
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 343 RRIFDTMQERTVMSWNAMLVGYG---KHGEGREVLELFTLMREENEVKPDGVTMLAVLSG 399
RR+FD M ER +SWNA++ Y K GE ++L+ L E + VT + G
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI----VTWNTIAGG 294
Query: 400 CSHGG 404
C G
Sbjct: 295 CLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 135/453 (29%), Positives = 236/453 (52%), Gaps = 53/453 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +++ C + G+ VH + + + ++++ LI +Y + + AR +FD M
Sbjct: 187 YPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMS 246
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX-------------- 202
ER+ VSW A+I+ Y+ +A L +M SG E + T+ T+
Sbjct: 247 ERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALN 306
Query: 203 ---------------SML--------------GRQIHSLIIKSNYDAHVY--VGSSLLDM 231
+M+ G+ H L+I+S +H V +SL+ M
Sbjct: 307 CVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITM 366
Query: 232 YAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTY 291
Y++ + A +F+ + + + +IISG+A EE L +++ G N++T
Sbjct: 367 YSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITL 426
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSY---VVLQNSLIDMYSKCGNLTYSRRIFDT 348
AS+L + + +L HGK+ H ++LR + SY ++L NSL+DMY+K G + ++R+FD+
Sbjct: 427 ASILPLFARVGNLQHGKEFHCYILRRQ--SYKDCLILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 349 MQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDR 408
M++R +++ +++ GYG+ G+G L F M + + +KPD VTM+AVLS CSH L
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKDM-DRSGIKPDHVTMVAVLSACSHSNLVRE 543
Query: 409 GLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
G +F M G+ + EHY C+VDL RAG +++A + +P+EP++A+ +LL A
Sbjct: 544 GHWLFTKMEH-VFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKA 602
Query: 469 CSVHSNVDIGVFVGHR-LLEIETGNAGNYFFLS 500
C +H N +IG + + LLE + + G+Y L+
Sbjct: 603 CLIHGNTNIGEWAADKLLLETKPEHLGHYMLLA 635
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 209/483 (43%), Gaps = 83/483 (17%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
LL+ H+ +LL+ CV GQ++HAH I + L +L+ Y+
Sbjct: 71 LLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSA 130
Query: 142 CDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
+ L +A+ + + + + W +I +Y + ++++++ +M+ G +EFT+ +V
Sbjct: 131 FNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSV 190
Query: 202 XSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
GR +H I S++ ++YV ++L+ MY + GK+ AR +F+ + ERD
Sbjct: 191 IKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDA 250
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASV------------------- 294
VS AII+ Y EA L ++ G++++ VT+ ++
Sbjct: 251 VSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVG 310
Query: 295 ----------------LTALSGLASLDHGKQVHNHVLRSEVPSYVV--LQNSLIDMYSKC 336
L A S + +L GK H V+RS S+ + ++NSLI MYS+C
Sbjct: 311 MRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
+L ++ +F ++ ++ +WN+++ G+ + E L M P+ +T+ ++
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSG-FHPNHITLASI 429
Query: 397 LSGCSHGGLEDRGLDI-------------------FYDM--TSGKIGVEPK--------- 426
L + G G + DM SG+I +
Sbjct: 430 LPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRD 489
Query: 427 KEHYGCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIWGSLLGACSVHSNVDIGVFVGH 483
K Y ++D GR G+ E A + K M +P ++L ACS HSN+ V GH
Sbjct: 490 KVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACS-HSNL---VREGH 545
Query: 484 RLL 486
L
Sbjct: 546 WLF 548
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 114/245 (46%), Gaps = 19/245 (7%)
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSML-----------GRQIHSLIIKSNYDAHV 222
G +A F +LR + +EF + S+L G+Q+H+ I S +
Sbjct: 60 GQLYEAFRTF-SLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDS 118
Query: 223 YVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGE 282
+ L+ Y+ + EA+ I E + +I Y + +E++ +++++ +
Sbjct: 119 VLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK 178
Query: 283 GMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYS 342
G++++ TY SV+ A + L +G+ VH + S + + N+LI MY + G + +
Sbjct: 179 GIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVA 238
Query: 343 RRIFDTMQERTVMSWNAMLVGYG---KHGEGREVLELFTLMREENEVKPDGVTMLAVLSG 399
RR+FD M ER +SWNA++ Y K GE ++L+ L E + VT + G
Sbjct: 239 RRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI----VTWNTIAGG 294
Query: 400 CSHGG 404
C G
Sbjct: 295 CLEAG 299
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 142/467 (30%), Positives = 229/467 (49%), Gaps = 53/467 (11%)
Query: 132 RTRLIVLYTKCDSLRDARHVFDEMPERN-VVSWTAMISAYSQRGYASQALNLFVQMLRSG 190
R +I Y + + A VF PE N +SW +I+ Y+Q GY +AL + V M +G
Sbjct: 196 RNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENG 255
Query: 191 TEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAK-------- 234
+ +E +F V ++L G+++H+ ++K+ ++ +V S ++D+Y K
Sbjct: 256 LKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAE 315
Query: 235 -----------------------DGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
GK+ EA+ +F+ L E+++V TA+ GY L +
Sbjct: 316 SAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDS 375
Query: 272 ALDLFRQ-LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
L+L R + E + + SVL A S A ++ GK++H H LR+ + L + +
Sbjct: 376 VLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFV 435
Query: 331 DMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
DMYSKCGN+ Y+ RIFD+ ER + +NAM+ G HG + + F M E KPD
Sbjct: 436 DMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMT-EGGFKPDE 494
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFI 450
+T +A+LS C H GL G F M + P+ HY C++DL G+A R+++A E +
Sbjct: 495 ITFMALLSACRHRGLVLEGEKYFKSMIEA-YNISPETGHYTCMIDLYGKAYRLDKAIELM 553
Query: 451 KKMP-FEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX-------- 501
+ + E A I G+ L ACS + N ++ V +LL IE N Y ++
Sbjct: 554 EGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRW 613
Query: 502 -DVRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVY 547
+++ +R M K + G S +D+ H F +SD SH E +Y
Sbjct: 614 DEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIY 660
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/474 (27%), Positives = 207/474 (43%), Gaps = 112/474 (23%)
Query: 108 RALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMI 167
+ L++G H IK+ + +L+ LY+K LR+AR+VFDEM ERNV SW A+I
Sbjct: 2 KCLKDGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVI 61
Query: 168 SAYSQ---------------------------RGYA------SQALNLFVQMLRSGTEP- 193
+AY + G+A S+A+ +F +M R +
Sbjct: 62 AAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDI 121
Query: 194 --NEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARG 243
++FT T+ + G Q+H +++K+ D + SSL+ MY+K GK E
Sbjct: 122 WIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCN 181
Query: 244 IFE--CL-------------------------------PE-RDVVSCTAIISGYAQLGLD 269
IF C+ PE D +S +I+GYAQ G +
Sbjct: 182 IFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYE 241
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
EEAL + + G++ + ++ +VL LS L SL GK+VH VL++ S + + +
Sbjct: 242 EEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGI 301
Query: 330 IDMYSKCGNLTY-------------------------------SRRIFDTMQERTVMSWN 358
+D+Y KCGN+ Y ++R+FD++ E+ ++ W
Sbjct: 302 VDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWT 361
Query: 359 AMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTS 418
AM +GY + VLEL PD + M++VL CS + G +I S
Sbjct: 362 AMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEI--HGHS 419
Query: 419 GKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVH 472
+ G+ K+ VD+ + G VE A E I FE ++ +++ C+ H
Sbjct: 420 LRTGILMDKKLVTAFVDMYSKCGNVEYA-ERIFDSSFERDTVMYNAMIAGCAHH 472
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 116/263 (44%), Gaps = 44/263 (16%)
Query: 79 QQPLLQMALCGHDMKFK----GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTR 134
++ L+MA+ + K + A+LN S ++L+ G+ VHA ++K + F+ +
Sbjct: 241 EEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG 300
Query: 135 LIVLYTKCDSLR-------------------------------DARHVFDEMPERNVVSW 163
++ +Y KC +++ +A+ +FD + E+N+V W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 164 TAMISAYSQRGYASQALNLFVQMLRSGTE-PNEFTFATVXSML--------GRQIHSLII 214
TAM Y L L + + T P+ +V G++IH +
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 215 KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALD 274
++ + ++ +DMY+K G + A IF+ ERD V A+I+G A G + ++
Sbjct: 421 RTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQ 480
Query: 275 LFRQLRGEGMQSNYVTYASVLTA 297
F + G + + +T+ ++L+A
Sbjct: 481 HFEDMTEGGFKPDEITFMALLSA 503
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 81/175 (46%), Gaps = 11/175 (6%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
++L C + + G+ +H H ++T L L T + +Y+KC ++ A +FD ER
Sbjct: 398 SVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFER 457
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---------GRQI 209
+ V + AMI+ + G+ +++ F M G +P+E TF + S +
Sbjct: 458 DTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYF 517
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP--ERDVVSCTAIISG 262
S+I N + ++D+Y K ++ +A + E + E+D V A ++
Sbjct: 518 KSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNA 572
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 191/376 (50%), Gaps = 18/376 (4%)
Query: 287 NYVTYASVLTALSGLAS----LDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYS 342
NYV S L L+ + L K VH + S + + L++MYS CG +
Sbjct: 249 NYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEA 308
Query: 343 RRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH 402
+F+ M E+ + +W ++ + K+G G + +++F+ +EE + PDG + C
Sbjct: 309 ASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNI-PDGQLFRGIFYACGM 367
Query: 403 GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIW 462
G D GL + ++ S G+ P E Y +V++ G ++EA EF+++MP EP +W
Sbjct: 368 LGDVDEGL-LHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVW 426
Query: 463 GSLLGACSVHSNVDIGVF---VGHRLLEIETGNAGNYFFLSXDVRSLRDMMLKKAVMKEP 519
+L+ VH N+++G + V L F+ + LKK
Sbjct: 427 ETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSREGFIPVKASDVEKESLKK------ 480
Query: 520 GRSRI--ELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQ 577
RS I + + F A D + P +E++ ++ L + E GYV + LHD+D+E
Sbjct: 481 -RSGILHGVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGYVAETRMALHDIDQES 539
Query: 578 KEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKN 637
KE +LLGHSE++A + ++++ P VIKNLR+CVDCHN K +S I GREV RD
Sbjct: 540 KETLLLGHSERIAFARAVLNSAPRKPFTVIKNLRVCVDCHNALKIMSDIVGREVITRDIK 599
Query: 638 RFHQIVGGKCSCGDYW 653
RFHQ+ G C+C DYW
Sbjct: 600 RFHQMKNGACTCKDYW 615
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 104 CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSW 163
C L+E + VH + + + L+ +Y+ C +A VF++M E+N+ +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 164 TAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX---SMLGRQIHSLI----IKS 216
+I +++ G+ A+++F + G P+ F + MLG L+ +
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 217 NYDAHVYVGS--SLLDMYAKDGKIHEARGIFECLP 249
+Y + SL++MYA G + EA E +P
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMP 418
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 10/147 (6%)
Query: 228 LLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSN 287
LL+MY+ G +EA +FE + E+++ + II +A+ G E+A+D+F + + EG +
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 288 YVTYASVLTALSGLASLDHG-----KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYS 342
+ + A L +D G ++ + + YV SL++MY+ G L +
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYV----SLVEMYALPGFLDEA 410
Query: 343 RRIFDTM-QERTVMSWNAMLVGYGKHG 368
+ M E V W ++ HG
Sbjct: 411 LEFVERMPMEPNVDVWETLMNLSRVHG 437
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 209/415 (50%), Gaps = 20/415 (4%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+ +H ++K + + + T L+ Y++C L A ++ + ++V T+++S Y+++
Sbjct: 266 EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEK 325
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVG 225
G A+ F + + + + + +G +H IKS V
Sbjct: 326 GDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVV 385
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR-GEGM 284
+ L+ MY+K + +FE L E ++S ++ISG Q G A ++F Q+ G+
Sbjct: 386 NGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
+ +T AS+L S L L+ GK++H + LR+ + + +LIDMY+KCGN +
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAES 505
Query: 345 IFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGG 404
+F +++ +WN+M+ GY G L + MRE+ +KPD +T L VLS C+HGG
Sbjct: 506 VFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKG-LKPDEITFLGVLSACNHGG 564
Query: 405 LEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGS 464
D G F M + G+ P +HY +V LLGRA EA I KM +P +A+WG+
Sbjct: 565 FVDEGKICFRAMIK-EFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGA 623
Query: 465 LLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMM 510
LL AC +H +++G +V ++ ++ N G Y +S DV +R+MM
Sbjct: 624 LLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMM 678
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 183/380 (48%), Gaps = 17/380 (4%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
LL C + +G+ VH K+ ++ LI Y+KC L A +F EM +++
Sbjct: 157 LLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKS 216
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--MLGRQIHSLIIKSN 217
VSW MI AYSQ G +A+ +F M E + T + S + +H L++K
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCG 276
Query: 218 YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFR 277
+ V +SL+ Y++ G + A ++ + +V T+I+S YA+ G + A+ F
Sbjct: 277 MVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFS 336
Query: 278 QLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCG 337
+ R M+ + V +L + +D G +H + ++S + + ++ N LI MYSK
Sbjct: 337 KTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFD 396
Query: 338 NLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
++ +F+ +QE ++SWN+++ G + G E+F M + PD +T+ ++L
Sbjct: 397 DVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLL 456
Query: 398 SGCSHGGLEDRGLDIF-YDMTSGKIGVEPKKEHYGC--VVDLLGRAG---RVEEAFEFIK 451
+GCS + G ++ Y + + + E++ C ++D+ + G + E F+ IK
Sbjct: 457 AGCSQLCCLNLGKELHGYTLRN-----NFENENFVCTALIDMYAKCGNEVQAESVFKSIK 511
Query: 452 KMPFEPTAAIWGSLLGACSV 471
P A W S++ S+
Sbjct: 512 A----PCTATWNSMISGYSL 527
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 190/406 (46%), Gaps = 48/406 (11%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
++V H+ K+ V+++T L+ LY K + A+ +FDEMPER+ V W A+I YS+
Sbjct: 70 EQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRN 129
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVG 225
GY A LF+ ML+ G P+ T + GR +H + KS + V
Sbjct: 130 GYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVK 189
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ 285
++L+ Y+K ++ A +F + ++ VS +I Y+Q GL EEA+ +F+ + + ++
Sbjct: 190 NALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVE 249
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRI 345
+ VT ++L+ A + H + +H V++ + + + + SL+ YS+CG L + R+
Sbjct: 250 ISPVTIINLLS-----AHVSH-EPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERL 303
Query: 346 FDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
+ + ++ +++ +++ Y + G+ + F+ R+ +K D V ++ +L GC
Sbjct: 304 YASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC-MKIDAVALVGILHGCKKSSH 362
Query: 406 EDRGLDI-------------------------FYDMTSGKIGVEPKKE----HYGCVVDL 436
D G+ + F D+ + E +E + V+
Sbjct: 363 IDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG 422
Query: 437 LGRAGRVEEAFEFIKKMPFE----PTAAIWGSLLGACSVHSNVDIG 478
++GR AFE +M P A SLL CS +++G
Sbjct: 423 CVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLG 468
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 123/235 (52%), Gaps = 13/235 (5%)
Query: 176 ASQALNLFVQMLRSGTEPNEFTF-----ATVXS-----MLGRQIHSLIIKSNYDAHVYVG 225
+S + +F +LRS PN FT AT S + Q+ + + KS D VYV
Sbjct: 29 SSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVK 88
Query: 226 SSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ 285
+SLL++Y K G + A+ +F+ +PERD V A+I GY++ G + +A LF + +G
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRI 345
+ T ++L + G+ VH +S + ++N+LI YSKC L + +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 346 FDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREEN-EVKPDGVTMLAVLSG 399
F M++++ +SWN M+ Y + G E + +F M E+N E+ P VT++ +LS
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP--VTIINLLSA 261
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
+LL C L G+ +H + ++ + F+ T LI +Y KC + A VF +
Sbjct: 454 SLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 513
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
+W +MIS YS G +AL+ +++M G +P+E TF V S
Sbjct: 514 CTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLS 558
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 205 bits (522), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 126/417 (30%), Positives = 213/417 (51%), Gaps = 63/417 (15%)
Query: 163 WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLII 214
+ +I +Y G +L LF ML S +PN TF ++ G +H +
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 215 KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE----------------C----------- 247
K + +V +S + Y + G + +R +F+ C
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 248 ----LPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS-------NYVTYASVLT 296
+P DVVS T +I+G+++ GL +AL +F GE +Q+ N T+ SVL+
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVF----GEMIQNERAVITPNEATFVSVLS 229
Query: 297 ALSGL--ASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV 354
+ + + GKQ+H +V+ E+ L +L+DMY K G+L + IFD ++++ V
Sbjct: 230 SCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKV 289
Query: 355 MSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFY 414
+WNA++ +G ++ LE+F +M+ + V P+G+T+LA+L+ C+ L D G+ +F
Sbjct: 290 CAWNAIISALASNGRPKQALEMFEMMKS-SYVHPNGITLLAILTACARSKLVDLGIQLFS 348
Query: 415 DMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSN 474
+ S + + P EHYGCVVDL+GRAG + +A FI+ +PFEP A++ G+LLGAC +H N
Sbjct: 349 SICS-EYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGACKIHEN 407
Query: 475 VDIGVFVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRS 522
++G VG +L+ ++ + G Y LS + +R M++ + K P S
Sbjct: 408 TELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIPAYS 464
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 124/262 (47%), Gaps = 44/262 (16%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE-- 154
+ +L+ S ++ G +H +K +L F++T + Y + L +R +FD+
Sbjct: 89 FPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDIL 148
Query: 155 -----------------------------MPERNVVSWTAMISAYSQRGYASQALNLFVQ 185
MP +VVSWT +I+ +S++G ++AL +F +
Sbjct: 149 NPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGE 208
Query: 186 ML---RSGTEPNEFTFATVXSM----------LGRQIHSLIIKSNYDAHVYVGSSLLDMY 232
M+ R+ PNE TF +V S LG+QIH ++ +G++LLDMY
Sbjct: 209 MIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMY 268
Query: 233 AKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYA 292
K G + A IF+ + ++ V + AIIS A G ++AL++F ++ + N +T
Sbjct: 269 GKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLL 328
Query: 293 SVLTALSGLASLDHGKQVHNHV 314
++LTA + +D G Q+ + +
Sbjct: 329 AILTACARSKLVDLGIQLFSSI 350
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 185/348 (53%), Gaps = 11/348 (3%)
Query: 108 RALREGQRVHAHMIKTR-YLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAM 166
+AL+ G+ VHAH++K++ Y+ F+ + LI LY KC + R VF +RN +SWTA+
Sbjct: 330 KALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTAL 389
Query: 167 ISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNY 218
+S Y+ G QAL V M + G P+ T ATV + G++IH +K+ +
Sbjct: 390 MSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF 449
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQ 278
+V + +SL+ MY+K G +F+ L +R+V + TA+I Y + +++FR
Sbjct: 450 LPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRL 509
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
+ + + VT VLT S L +L GK++H H+L+ E S + +I MY KCG+
Sbjct: 510 MLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGD 569
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLS 398
L + FD + + ++W A++ YG + R+ + F M P+ T AVLS
Sbjct: 570 LRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRG-FTPNTFTFTAVLS 628
Query: 399 GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
CS G D F+++ ++P +EHY V++LL R GRVEEA
Sbjct: 629 ICSQAGFVDEAYR-FFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 178/328 (54%), Gaps = 11/328 (3%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M G D+ + + ALR+G + HA IK SVFL+T L+ +Y KC
Sbjct: 204 EMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCG 263
Query: 144 SLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQML-RSGTEPNEFTFATVX 202
+ AR VFDE+ ER++V W AMI+ + +AL LF M+ PN T+
Sbjct: 264 KVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL 323
Query: 203 SMLG--------RQIHSLIIKS-NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV 253
+LG +++H+ ++KS NY +V S L+D+Y K G + R +F +R+
Sbjct: 324 PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNA 383
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
+S TA++SGYA G ++AL ++ EG + + VT A+VL + L ++ GK++H +
Sbjct: 384 ISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCY 443
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREV 373
L++ V L SL+ MYSKCG Y R+FD +++R V +W AM+ Y ++ + R
Sbjct: 444 ALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAG 503
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCS 401
+E+F LM +PD VTM VL+ CS
Sbjct: 504 IEVFRLMLLSKH-RPDSVTMGRVLTVCS 530
Score = 186 bits (473), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 111/319 (34%), Positives = 178/319 (55%), Gaps = 17/319 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
++ALL CV +++L G++VH H+ + FLRT+L+ +YT C S++DA+ VFDE
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDEST 173
Query: 157 ERNVVSWTAMI--SAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------G 206
NV SW A++ + S + L+ F +M G + N ++ + V G
Sbjct: 174 SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQG 233
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQL 266
+ H+L IK+ V++ +SL+DMY K GK+ AR +F+ + ERD+V A+I+G A
Sbjct: 234 LKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHN 293
Query: 267 GLDEEALDLFRQL-RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV-- 323
EAL LFR + E + N V ++L L + +L GK+VH HVL+S+ +YV
Sbjct: 294 KRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSK--NYVEQ 351
Query: 324 -VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
+ + LID+Y KCG++ RR+F ++R +SW A++ GY +G + L M++
Sbjct: 352 PFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ 411
Query: 383 ENEVKPDGVTMLAVLSGCS 401
E +PD VT+ VL C+
Sbjct: 412 EG-FRPDVVTIATVLPVCA 429
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 139/285 (48%), Gaps = 11/285 (3%)
Query: 167 ISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV-------XSML-GRQIHSLIIKSNY 218
I ++++ AL + + + G N TF+ + S+L G+Q+H I +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLD--EEALDLF 276
+++ ++ + L+ MY G + +A+ +F+ +V S A++ G G ++ L F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKC 336
++R G+ N + ++V + +G ++L G + H +++ + + V L+ SL+DMY KC
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKC 262
Query: 337 GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAV 396
G + +RR+FD + ER ++ W AM+ G + E L LF M E ++ P+ V + +
Sbjct: 263 GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTI 322
Query: 397 LSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAG 441
L G ++ + K VE H G ++DL + G
Sbjct: 323 LPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSG-LIDLYCKCG 366
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 57/105 (54%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
+L C +AL+ G+ +H H++K + F+ R+I +Y KC LR A FD + +
Sbjct: 525 VLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKG 584
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM 204
++WTA+I AY A+N F QM+ G PN FTF V S+
Sbjct: 585 SLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSI 629
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 192 bits (487), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 125/385 (32%), Positives = 192/385 (49%), Gaps = 17/385 (4%)
Query: 127 PSVFLRTRLIVLYTKCD-SLRDARHVFDEMPERNV------VSWTAMISAYSQRGYASQA 179
PS F +I + T + S ++ F EM R+V + A + G +
Sbjct: 77 PSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLV 136
Query: 180 LNLFVQMLRSGTEPNEFTFAT---VXSMLGRQIHSL-IIKSNYDAHVYVGSSLLDMYAKD 235
L Q LR G + FT T V S++ +L + N V + L+D K
Sbjct: 137 KTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKA 196
Query: 236 GKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL 295
+I AR +F+ +P RD+VS ++ISGYAQ+ EA+ LF ++ G++ + V S L
Sbjct: 197 REIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTL 256
Query: 296 TALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM 355
+A + GK +H++ R + L L+D Y+KCG + + IF+ ++T+
Sbjct: 257 SACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLF 316
Query: 356 SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
+WNAM+ G HG G ++ F M +KPDGVT ++VL GCSH GL D ++F
Sbjct: 317 TWNAMITGLAMHGNGELTVDYFRKMVSSG-IKPDGVTFISVLVGCSHSGLVDEARNLFDQ 375
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE----PTAAIWGSLLGACSV 471
M S V + +HYGC+ DLLGRAG +EEA E I++MP + W LLG C +
Sbjct: 376 MRS-LYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRI 434
Query: 472 HSNVDIGVFVGHRLLEIETGNAGNY 496
H N++I +R+ + + G Y
Sbjct: 435 HGNIEIAEKAANRVKALSPEDGGVY 459
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 137/324 (42%), Gaps = 49/324 (15%)
Query: 94 FKGYNALLNECVSKRA--LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHV 151
F + + C +K+ L + +H ++ L +F LI +Y+ + A +
Sbjct: 115 FHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQL 174
Query: 152 FDEMPERNV-------------------------------VSWTAMISAYSQRGYASQAL 180
FDE P+R+V VSW ++IS Y+Q + +A+
Sbjct: 175 FDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAI 234
Query: 181 NLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMY 232
LF +M+ G +P+ + S G+ IH + ++ + L+D Y
Sbjct: 235 KLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFY 294
Query: 233 AKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYA 292
AK G I A IFE ++ + + A+I+G A G E +D FR++ G++ + VT+
Sbjct: 295 AKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFI 354
Query: 293 SVLTALSGLASLDHGKQVHNHVLRS--EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM- 349
SVL S +D + + + +RS +V + + D+ + G + + + + M
Sbjct: 355 SVLVGCSHSGLVDEARNLFDQ-MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMP 413
Query: 350 ----QERTVMSWNAMLVGYGKHGE 369
+++W+ +L G HG
Sbjct: 414 KDGGNREKLLAWSGLLGGCRIHGN 437
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 193/390 (49%), Gaps = 21/390 (5%)
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
++A+++ + R EG + + +L K VH + S S + NS+
Sbjct: 163 KKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSI 222
Query: 330 IDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPD 389
I+MYS CG++ + +F++M ER + +W ++ + K+G+G + ++ F+ ++E KPD
Sbjct: 223 IEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGN-KPD 281
Query: 390 GVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF 449
G + C G + GL F M + G+ P EHY +V +L G ++EA F
Sbjct: 282 GEMFKEIFFACGVLGDMNEGLLHFESMYK-EYGIIPCMEHYVSLVKMLAEPGYLDEALRF 340
Query: 450 IKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETG------NAGNYFFLSXDV 503
++ M EP +W +L+ VH ++ +G + +++ AG S D+
Sbjct: 341 VESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAGLVPVKSSDL 398
Query: 504 RSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYV 563
+++ + + A G + A D S P E+Y+ +K L E GYV
Sbjct: 399 --VKEKLQRMAKGPNYG---------IRYMAAGDISRPENRELYMALKSLKEHMIEIGYV 447
Query: 564 PDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFAKYI 623
P LHDVD+E K++ L H+E+ A + TP IRV+KNLR+C DCHN K +
Sbjct: 448 PLSKLALHDVDQESKDENLFNHNERFAFISTFLDTPARSLIRVMKNLRVCADCHNALKLM 507
Query: 624 SKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
SKI GRE+ RD RFH + G CSC +YW
Sbjct: 508 SKIVGRELISRDAKRFHHMKDGVCSCREYW 537
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 87/187 (46%), Gaps = 11/187 (5%)
Query: 104 CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSW 163
C +AL+E + VH + + + + +I +Y+ C S+ DA VF+ MPERN+ +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 164 TAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX---SMLGRQIHSLI-IKSNYD 219
+I +++ G A++ F + + G +P+ F + +LG L+ +S Y
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 220 AHVYVGS-----SLLDMYAKDGKIHEARGIFECL-PERDVVSCTAIISG-YAQLGLDEEA 272
+ + SL+ M A+ G + EA E + P D+ +S + L L +
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVDLWETLMNLSRVHGDLILGDRC 370
Query: 273 LDLFRQL 279
D+ QL
Sbjct: 371 QDMVEQL 377
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGL 268
+H I S + + +S+++MY+ G + +A +F +PER++ + +I +A+ G
Sbjct: 203 VHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQ 262
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN- 327
E+A+D F + + EG + + + + A L ++ G +H + E +++
Sbjct: 263 GEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG-LLHFESMYKEYGIIPCMEHY 321
Query: 328 -SLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGE 369
SL+ M ++ G L + R ++M E V W ++ HG+
Sbjct: 322 VSLVKMLAEPGYLDEALRFVESM-EPNVDLWETLMNLSRVHGD 363
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 186/354 (52%), Gaps = 45/354 (12%)
Query: 215 KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERD---------------------- 252
K +++HVYV ++L+ MY G + +A +F+ +PER+
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 253 ---------VVSCTAIISGYAQLGLDEEALDLF-RQLRGEGMQSNYVTYASVLTALSGLA 302
VVS T II GYA++ +EA+ LF R + + ++ N +T ++L A+ L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 303 SLDHGKQVHNHV-LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE--RTVMSWNA 359
L VH +V R VP + + NSLID Y+KCG + + + F + + ++SW
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG 419
M+ + HG G+E + +F M E +KP+ VTM++VL+ CSHGGL + F++
Sbjct: 331 MISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVN 389
Query: 420 KIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGV 479
+ + P +HYGC+VD+L R GR+EEA + ++P E A +W LLGACSV+ + ++
Sbjct: 390 EYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAE 449
Query: 480 FVGHRLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRI 524
V +L+E+E + G+Y +S D + R M + V K PG S++
Sbjct: 450 RVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 142/319 (44%), Gaps = 49/319 (15%)
Query: 129 VFLRTRLIVLYTKCDSLRDARHVFDEMPERN----------------------------- 159
V+++T L+ +Y ++ DA VFDEMPERN
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 160 --VVSWTAMISAYSQRGYASQALNLFVQMLR-SGTEPNEFTFATVXSMLGR--------Q 208
VVSWT +I Y++ +A+ LF +M+ +PNE T + +
Sbjct: 218 RTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGS 277
Query: 209 IHSLIIKSNY-DAHVYVGSSLLDMYAKDGKIHEARGIFECLPE--RDVVSCTAIISGYAQ 265
+H+ + K + + V +SL+D YAK G I A F +P +++VS T +IS +A
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS--GLASLDHGKQVHNHVLRSEVPSYV 323
G+ +EA+ +F+ + G++ N VT SVL A S GLA + + + V ++ V
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 324 VLQNSLIDMYSKCGNLTYSRRI-FDTMQERTVMSWNAMLVGYGKHGEGREVLELFT--LM 380
L+DM + G L + +I + E + W ML+G + E+ E T LM
Sbjct: 398 KHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWR-MLLGACSVYDDAELAERVTRKLM 456
Query: 381 REENEVKPDGVTMLAVLSG 399
E D V M + G
Sbjct: 457 ELERSHGGDYVLMSNIFCG 475
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 116 VHAHMIKTRYLP-SVFLRTRLIVLYTKCDSLRDARHVFDEMPE--RNVVSWTAMISAYSQ 172
VHA++ K ++P + + LI Y KC ++ A F E+P +N+VSWT MISA++
Sbjct: 278 VHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAI 337
Query: 173 RGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ----------IHSLIIKSNYDAHV 222
G +A+++F M R G +PN T +V + ++++ + V
Sbjct: 338 HGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDV 397
Query: 223 YVGSSLLDMYAKDGKIHEARGIFECLP--ERDVV 254
L+DM + G++ EA I +P E+ VV
Sbjct: 398 KHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVV 431
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/446 (27%), Positives = 223/446 (50%), Gaps = 24/446 (5%)
Query: 110 LREGQRVHAHMI---KTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAM 166
+R G+++H + I +RY ++ + ++ +Y + A VF M +R+VVSW +
Sbjct: 149 VRHGEQIHGNAICSGVSRY--NLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCL 206
Query: 167 ISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNY 218
I + S G AL+ F M +P+E+T + V S+ G+Q +L IK +
Sbjct: 207 ILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQ 278
++ V + +DM++K ++ ++ +F L + D V C ++I Y+ E+AL LF
Sbjct: 267 LSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFIL 326
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
+ ++ + T++SVL++++ + LDHG VH+ V++ + SL++MY K G+
Sbjct: 327 AMTQSVRPDKFTFSSVLSSMNAVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGS 385
Query: 339 LTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLS 398
+ + +F + ++ WN +++G ++ E L +F + +KPD VT++ +L
Sbjct: 386 VDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILV 445
Query: 399 GCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPT 458
C + G + G+ IF M GV P EHY C+++LL R G + EA + K+PFEP+
Sbjct: 446 ACCYAGFVNEGIQIFSSMEKAH-GVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPS 504
Query: 459 AAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFL---------SXDVRSLRDM 509
+ IW +L A + + V +LE E ++ Y L + LR
Sbjct: 505 SHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYA 564
Query: 510 MLKKAVMKEPGRSRIELDQVLHTFHA 535
M + + G S+I ++ + +F A
Sbjct: 565 MNEHKLKSAQGSSKISIESSVFSFEA 590
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 165/353 (46%), Gaps = 39/353 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDS------------ 144
++ L+N + ++ + VHA +++ ++ + + R + LY K S
Sbjct: 7 FSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIP 66
Query: 145 -------------------LRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQ 185
L +A +FDEMPER+VVSW MIS G+ + +F
Sbjct: 67 DKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFD 126
Query: 186 MLRSGTEPNEFTFATVXSML-----GRQIHSLIIKSNYDAH-VYVGSSLLDMYAKDGKIH 239
M R P EFTF+ + S++ G QIH I S + + V +S++DMY + G
Sbjct: 127 MQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFD 186
Query: 240 EARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS 299
A +F + +RDVVS +I + G E ALD F +R +Q + T + V++ S
Sbjct: 187 YALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICS 246
Query: 300 GLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNA 359
L L GKQ ++ S ++ + IDM+SKC L S ++F +++ + N+
Sbjct: 247 DLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNS 306
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
M+ Y H G + L LF L ++ V+PD T +VLS + + D G D+
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQS-VRPDKFTFSSVLSS-MNAVMLDHGADV 357
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 145/305 (47%), Gaps = 49/305 (16%)
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKI-------------------------- 238
L + +H+ ++++ + Y G+ L +Y K G +
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 239 -----HEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYAS 293
+ A +F+ +PERDVVS +ISG G E + +F ++ ++ T+ S
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTF-S 140
Query: 294 VLTALSGLASLDHGKQVHNHVLRSEVPSY-VVLQNSLIDMYSKCGNLTYSRRIFDTMQER 352
+L +L + + HG+Q+H + + S V Y +V+ NS++DMY + G Y+ +F TM++R
Sbjct: 141 ILASL--VTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 353 TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS-----HGGLED 407
V+SWN +++ G L+ F LMRE E++PD T+ V+S CS G +
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREM-EIQPDEYTVSMVVSICSDLRELSKGKQA 257
Query: 408 RGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLG 467
L I K+G G +D+ + R++++ + +++ + + + S++G
Sbjct: 258 LALCI-------KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELE-KWDSVLCNSMIG 309
Query: 468 ACSVH 472
+ S H
Sbjct: 310 SYSWH 314
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 109/215 (50%), Gaps = 8/215 (3%)
Query: 104 CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSW 163
C R L +G++ A IK +L + + I +++KC+ L D+ +F E+ + + V
Sbjct: 245 CSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLC 304
Query: 164 TAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-------GRQIHSLIIKS 216
+MI +YS AL LF+ + P++FTF++V S + G +HSL+IK
Sbjct: 305 NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHGADVHSLVIKL 364
Query: 217 NYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLF 276
+D V +SL++MY K G + A G+F +D++ +I G A+ E+L +F
Sbjct: 365 GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIF 424
Query: 277 RQ-LRGEGMQSNYVTYASVLTALSGLASLDHGKQV 310
Q L + ++ + VT +L A ++ G Q+
Sbjct: 425 NQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQI 459
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/349 (34%), Positives = 186/349 (53%), Gaps = 34/349 (9%)
Query: 205 LGRQIHSLIIKSN--YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 262
+GR +H ++ K Y++ + +G++LL YAK+G + AR +F+ +PER V+ A+I G
Sbjct: 129 VGRIVHGMVKKLGFLYESEL-IGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGG 187
Query: 263 YAQLGLD-----EEALDLFRQLR--GEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV- 314
Y +A+ LFR+ G G++ T VL+A+S L+ G VH ++
Sbjct: 188 YCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 315 ---LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGR 371
EV V + +L+DMYSKCG L + +F+ M+ + V +W +M G +G G
Sbjct: 248 KLGFTPEVD--VFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGN 305
Query: 372 EVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG 431
E L M E +KP+ +T ++LS H GL + G+++F M + + GV P EHYG
Sbjct: 306 ETPNLLNRMAESG-IKPNEITFTSLLSAYRHIGLVEEGIELFKSMKT-RFGVTPVIEHYG 363
Query: 432 CVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIE-- 489
C+VDLLG+AGR++EA++FI MP +P A + SL ACS++ +G +G LLEIE
Sbjct: 364 CIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIERE 423
Query: 490 -----TGNAGNYFFLS---------XDVRSLRDMMLKKAVMKEPGRSRI 524
+Y LS +V LR M ++ + PG S +
Sbjct: 424 DEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 19/249 (7%)
Query: 110 LREGQRVHAHMIKTRYL-PSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMIS 168
LR G+ VH + K +L S + T L+ Y K LR AR VFDEMPER V+W AMI
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 169 AY---SQRG--YASQALNLFVQM--LRSGTEPNEFTFATVXSM--------LGRQIHSLI 213
Y +G A +A+ LF + SG P + T V S +G +H I
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 214 IKSNY--DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
K + + V++G++L+DMY+K G ++ A +FE + ++V + T++ +G A G E
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV-LRSEVPSYVVLQNSLI 330
+L ++ G++ N +T+ S+L+A + ++ G ++ + R V + ++
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 331 DMYSKCGNL 339
D+ K G +
Sbjct: 367 DLLGKAGRI 375
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 105 VSKRALRE-GQRVHAHMIKTRYLP--SVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVV 161
+S+ L E G VH ++ K + P VF+ T L+ +Y+KC L +A VF+ M +NV
Sbjct: 230 ISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVF 289
Query: 162 SWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQI----------HS 211
+WT+M + + G ++ NL +M SG +PNE TF ++ S R I S
Sbjct: 290 TWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAY-RHIGLVEEGIELFKS 348
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP 249
+ + + ++D+ K G+I EA +P
Sbjct: 349 MKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMP 386
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/384 (30%), Positives = 196/384 (51%), Gaps = 41/384 (10%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+++H +IK L +LI + + + A VF+++ + +W MI + S
Sbjct: 37 KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVN 96
Query: 174 GYASQALNLFVQMLRS-GTEPNEFTF--------ATVXSMLGRQIHSLIIKSNYDAHVYV 224
+AL LF+ M+ S ++ ++FTF A+ LG Q+H L IK+ + V+
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 225 GSSLLDMYAKDGKIHEARGIFE-------------------------------CLPERDV 253
++L+D+Y K GK R +F+ +P R+V
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
VS TA+I+ Y + +EA LFR+++ + ++ N T ++L A + L SL G+ VH++
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREV 373
++ L +LIDMYSKCG+L +R++FD MQ +++ +WN+M+ G HG G E
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCV 433
L LF M EE V+PD +T + VLS C++ G GL F M G+ P +EH C+
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ-VYGISPIREHNACM 395
Query: 434 VDLLGRAGRVEEAFEFIKKMPFEP 457
+ LL +A VE+A ++ M +P
Sbjct: 396 IQLLEQALEVEKASNLVESMDSDP 419
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 42/268 (15%)
Query: 82 LLQMALCGHDMKFKGYNA--LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLY 139
L + + H +F + ++ C++ ++R G +VH IK + VF + L+ LY
Sbjct: 105 LFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLY 164
Query: 140 TKCDSLRDARHVFDEMPER-------------------------------NVVSWTAMIS 168
KC R VFD+MP R NVVSWTAMI+
Sbjct: 165 FKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMIT 224
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYDA 220
AY + +A LF +M +PNEFT + +GR +H K+ +
Sbjct: 225 AYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVL 284
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLR 280
++G++L+DMY+K G + +AR +F+ + + + + ++I+ G EEAL LF ++
Sbjct: 285 DCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEME 344
Query: 281 GEG-MQSNYVTYASVLTALSGLASLDHG 307
E ++ + +T+ VL+A + ++ G
Sbjct: 345 EEASVEPDAITFVGVLSACANTGNVKDG 372
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 116/352 (32%), Positives = 191/352 (54%), Gaps = 19/352 (5%)
Query: 214 IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEAL 273
+KS +D + +S++D Y + G + A G+F+ L ++D V+ T +ISG Q L EA
Sbjct: 394 VKSLHDKVSW--TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAA 451
Query: 274 DLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV--PSYVVLQNSLID 331
L + G++ TY+ +L++ ++LD GK +H + ++ ++LQNSL+
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS 511
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
MY+KCG + + IF M ++ +SWN+M++G HG + L LF M + + KP+ V
Sbjct: 512 MYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK-KPNSV 570
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
T L VLS CSH GL RGL++F M ++P +HY ++DLLGRAG+++EA EFI
Sbjct: 571 TFLGVLSACSHSGLITRGLELFKAMKE-TYSIQPGIDHYISMIDLLGRAGKLKEAEEFIS 629
Query: 452 KMPFEPTAAIWGSLLGACSVH----SNVDIGVFVGHRLLEIETGNAGNYFFLSX------ 501
+PF P ++G+LLG C ++ I RLLE++ NA + L
Sbjct: 630 ALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLG 689
Query: 502 --DV-RSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKV 550
D+ + +R M K V K PG S + ++ + F + D+S ++ + +
Sbjct: 690 RHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQMVLPI 741
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 150/318 (47%), Gaps = 54/318 (16%)
Query: 103 ECVSKRALREGQRVHAHMIKTRY-----LPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
E + R L EG VHA + + + V T L+ Y K L +AR +F+ MPE
Sbjct: 46 EALILRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPE 105
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---GRQIHSL-I 213
RN+V+ AM++ Y + ++A LF +M + N ++ + + L GR ++ +
Sbjct: 106 RNIVTCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVMLTALCDDGRSEDAVEL 160
Query: 214 IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEAL 273
+ +V ++L+ ++G + +A+ +F+ +P RDVVS A+I GY + EEA
Sbjct: 161 FDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAK 220
Query: 274 DLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMY 333
LF G+ + N VT+ S++ Y
Sbjct: 221 LLF----GDMSEKNVVTWTSMVYG-----------------------------------Y 241
Query: 334 SKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE-NEVKPDGVT 392
+ G++ + R+F M ER ++SW AM+ G+ + RE L LF M+++ + V P+G T
Sbjct: 242 CRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGET 301
Query: 393 MLAVLSGCSHGGLEDRGL 410
++++ C G+E R L
Sbjct: 302 LISLAYACGGLGVEFRRL 319
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/466 (23%), Positives = 190/466 (40%), Gaps = 91/466 (19%)
Query: 98 NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLR--DARHVFDEM 155
NA+L V R + E + M K + + ++L CD R DA +FDEM
Sbjct: 112 NAMLTGYVKCRRMNEAWTLFREMPKN-------VVSWTVMLTALCDDGRSEDAVELFDEM 164
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIK 215
PERNVVSW +++ + G +A +F M G + L+
Sbjct: 165 PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFG 224
Query: 216 SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDL 275
+ +V +S++ Y + G + EA +F +PER++VS TA+ISG+A L EAL L
Sbjct: 225 DMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALML 284
Query: 276 FRQLRG--EGMQSNYVTYASVLTALSGLA--------------------SLDHGKQVHNH 313
F +++ + + N T S+ A GL ++DH ++
Sbjct: 285 FLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKS 344
Query: 314 VLRSEVPSYVV------------LQ--NSLIDMYSKCGNLTYSRRIFDTMQE-RTVMSWN 358
++ S ++ LQ N +I+ Y K G+L + +F+ ++ +SW
Sbjct: 345 LVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWT 404
Query: 359 AMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTS 418
+M+ GY + G+ LF + ++ DGVT ++SG L + DM
Sbjct: 405 SMIDGYLEAGDVSRAFGLFQKLHDK-----DGVTWTVMISGLVQNELFAEAASLLSDMV- 458
Query: 419 GKIGVEP-------------------KKEHYGCV------------------VDLLGRAG 441
+ G++P + +H CV V + + G
Sbjct: 459 -RCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCG 517
Query: 442 RVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
+E+A+E KM + T + W S++ S H D + + +L+
Sbjct: 518 AIEDAYEIFAKMVQKDTVS-WNSMIMGLSHHGLADKALNLFKEMLD 562
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 131/266 (49%), Gaps = 29/266 (10%)
Query: 99 ALLNEC--------VSKRALREG--QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDA 148
+LLNE + R L+ G +R + + L T +I Y + + A
Sbjct: 360 SLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRA 419
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG-- 206
+F ++ +++ V+WT MIS Q ++A +L M+R G +P T++ + S G
Sbjct: 420 FGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGAT 479
Query: 207 ------RQIHSLIIKSN--YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTA 258
+ IH +I K+ YD + + +SL+ MYAK G I +A IF + ++D VS +
Sbjct: 480 SNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNS 539
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQV-----HNH 313
+I G + GL ++AL+LF+++ G + N VT+ VL+A S + G ++ +
Sbjct: 540 MIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETY 599
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNL 339
++ + Y+ S+ID+ + G L
Sbjct: 600 SIQPGIDHYI----SMIDLLGRAGKL 621
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTR--YLPSVFLRTRLIVLY 139
L M CG Y+ LL+ + L +G+ +H + KT Y P + L+ L+ +Y
Sbjct: 454 LSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMY 513
Query: 140 TKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
KC ++ DA +F +M +++ VSW +MI S G A +ALNLF +ML SG +PN TF
Sbjct: 514 AKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFL 573
Query: 200 TVXS------MLGRQIHSL-IIKSNYDAHVYVGS--SLLDMYAKDGKIHEARGIFECLP 249
V S ++ R + +K Y + S++D+ + GK+ EA LP
Sbjct: 574 GVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP 632
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 18/171 (10%)
Query: 301 LASLDHGKQVHNHVLRSEVP-----SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM 355
L L G VH L ++P + VV SL+ Y+K G L +R +F+ M ER ++
Sbjct: 50 LRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV 109
Query: 356 SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
+ NAML GY K R + E +TL RE + ML L C G ED +++F +
Sbjct: 110 TCNAMLTGYVKC---RRMNEAWTLFREMPKNVVSWTVMLTAL--CDDGRSED-AVELFDE 163
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL 466
M E + +V L R G +E+A + MP + W +++
Sbjct: 164 MP------ERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVS-WNAMI 207
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 49/346 (14%)
Query: 133 TRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE 192
T +I + K L +AR FD MPE++VVSW AM+S Y+Q G+ AL LF MLR G
Sbjct: 202 TVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR 261
Query: 193 PNEFTFATVXSM--------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAK---------- 234
PNE T+ V S L R + LI + + +V ++LLDM+AK
Sbjct: 262 PNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 235 ----------------------DGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEA 272
G + AR +F+ +P+R+VVS ++I+GYA G A
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALA 381
Query: 273 LDLFRQLRGEG-MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
++ F + G + + VT SVL+A +A L+ G + +++ ++++ SLI
Sbjct: 382 IEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIF 441
Query: 332 MYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
MY++ GNL ++R+FD M+ER V+S+N + + +G+G E L L + M++E ++PD V
Sbjct: 442 MYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEG-IEPDRV 500
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
T +VL+ C+ GL G IF + + P +HY C +DLL
Sbjct: 501 TYTSVLTACNRAGLLKEGQRIFKSIRN------PLADHYAC-MDLL 539
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 169/381 (44%), Gaps = 65/381 (17%)
Query: 105 VSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWT 164
V K A R G A + K + ++R ++ +Y K +S+ AR VFD++ +R W
Sbjct: 112 VIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWN 171
Query: 165 AMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYV 224
MIS Y + G +A LF M N+ TV
Sbjct: 172 VMISGYWKWGNKEEACKLFDMM-----PENDVVSWTV----------------------- 203
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGM 284
++ +AK + AR F+ +PE+ VVS A++SGYAQ G E+AL LF + G+
Sbjct: 204 ---MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGV 260
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKC-------- 336
+ N T+ V++A S A + + + V ++ +L+DM++KC
Sbjct: 261 RPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARR 320
Query: 337 ------------------------GNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
G+++ +R++FDTM +R V+SWN+++ GY +G+
Sbjct: 321 IFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAAL 380
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
+E F M + + KPD VTM++VLS C H + G D D K ++ Y
Sbjct: 381 AIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG-DCIVDYIR-KNQIKLNDSGYRS 438
Query: 433 VVDLLGRAGRVEEAFEFIKKM 453
++ + R G + EA +M
Sbjct: 439 LIFMYARGGNLWEAKRVFDEM 459
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 176 bits (447), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 196/417 (47%), Gaps = 53/417 (12%)
Query: 166 MISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSN 217
+ AY QAL + +LR G P+ +TF ++ S + G+ H IK
Sbjct: 89 VFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG 148
Query: 218 YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG--------LD 269
D + V +SL+ MY G + A+ +F +P+RD+VS +II+G + G D
Sbjct: 149 CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFD 208
Query: 270 EE-----------------------ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH 306
E ++ LFR++ G Q N T +L A A L
Sbjct: 209 EMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKE 268
Query: 307 GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGK 366
G+ VH ++R+ + S VV+ +LIDMY KC + +RRIFD++ R ++WN M++ +
Sbjct: 269 GRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCL 328
Query: 367 HGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPK 426
HG LELF M ++PD VT + VL GC+ GL +G +Y + + ++P
Sbjct: 329 HGRPEGGLELFEAMI-NGMLRPDEVTFVGVLCGCARAGLVSQGQS-YYSLMVDEFQIKPN 386
Query: 427 KEHYGCVVDLLGRAGRVEEAFEFIKKMPFE---PTAAIWGSLLGACSVHSNVDIGVFVGH 483
H C+ +L AG EEA E +K +P E P + W +LL + N +G +
Sbjct: 387 FGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAK 446
Query: 484 RLLEIETGNAGNYFFLSX---------DVRSLRDMMLKKAVMKEPGRSRIELDQVLH 531
L+E + N Y L DV +R+M+ ++ + + PG ++L +++H
Sbjct: 447 SLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 104/199 (52%), Gaps = 9/199 (4%)
Query: 148 ARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-- 205
A +FDEMP++N++SW MISAY +++LF +M+R+G + NE T + +
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 206 ------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI 259
GR +H+ +I++ ++ V + ++L+DMY K ++ AR IF+ L R+ V+ +
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS-E 318
I + G E L+LF + ++ + VT+ VL + + G+ ++ ++ +
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 319 VPSYVVLQNSLIDMYSKCG 337
+ Q + ++YS G
Sbjct: 383 IKPNFGHQWCMANLYSSAG 401
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 108/255 (42%), Gaps = 23/255 (9%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
LLN C L+EG+ VHA +I+T SV + T LI +Y KC + AR +FD + RN
Sbjct: 256 LLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRN 315
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYD 219
V+W MI A+ G L LF M+ P+E TF V R
Sbjct: 316 KVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARA----------- 364
Query: 220 AHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
V G S + + +I G C+ Y+ G EEA + + L
Sbjct: 365 GLVSQGQSYYSLMVDEFQIKPNFGHQWCMANL-----------YSSAGFPEEAEEALKNL 413
Query: 280 RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNL 339
E + +A++L++ + G+ + ++ ++ +Y L+++YS G
Sbjct: 414 PDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYH-LLMNIYSVTGRW 472
Query: 340 TYSRRIFDTMQERTV 354
R+ + ++ER +
Sbjct: 473 EDVNRVREMVKERKI 487
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 209/441 (47%), Gaps = 43/441 (9%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLP-SVFLRTRLIVLYTKCDSLRDARHVFDEM 155
+ A L C G +H+ ++K +V + LI +Y KC + DA VF M
Sbjct: 159 FTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHM 218
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIK 215
E++ VSW A++++ S+ G L F QM P+ T+
Sbjct: 219 EEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVTY----------------- 257
Query: 216 SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDL 275
+ L+D + K G + A + +P + S I++GY EA +
Sbjct: 258 ----------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEF 307
Query: 276 FRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSK 335
F ++ G++ + + + VL A++ LA + G +H + + S VV+ ++LIDMYSK
Sbjct: 308 FTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSK 367
Query: 336 CGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLA 395
CG L ++ +F TM + ++ WN M+ GY ++G+ E ++LF +++E +KPD T L
Sbjct: 368 CGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLN 427
Query: 396 VLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPF 455
+L+ CSH + + +++M + ++P EH ++ +G+ G V +A + I++ F
Sbjct: 428 LLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGF 487
Query: 456 EPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSX-----------DVR 504
W +LLGACS ++ V +++E+ + Y ++ +V
Sbjct: 488 GYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVG 547
Query: 505 SLRDMMLKKAVMKEPGRSRIE 525
+R +M + V+KE G S I+
Sbjct: 548 QIRKIMRESGVLKEVGSSWID 568
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 128/276 (46%), Gaps = 48/276 (17%)
Query: 114 QRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVSWTAMISAYSQR 173
+++H ++ K ++ + L L+ Y DSL DA VFDEMP+ +V+SW +++S Y Q
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 174 GYASQALNLFVQMLRSGTEPNEFTFATV--------XSMLGRQIHSLIIKSNYD-AHVYV 224
G + + LF+++ RS PNEF+F S LG IHS ++K + +V V
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVV 194
Query: 225 GSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGM 284
G+ L+DMY K G + +A +F+ + E+D VS AI++ ++ G E L F Q+
Sbjct: 195 GNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP---- 250
Query: 285 QSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
+ VTY N LID + K G+ + +
Sbjct: 251 NPDTVTY-----------------------------------NELIDAFVKSGDFNNAFQ 275
Query: 345 IFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLM 380
+ M SWN +L GY + E E FT M
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 160/354 (45%), Gaps = 39/354 (11%)
Query: 162 SWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------RQIHSLI 213
SW+ ++ A ++ G + L V+++ G +P+ + + G RQ+H +
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 214 IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEAL 273
K + ++ + +SL+ Y + +A +F+ +P+ DV+S +++SGY Q G +E +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 274 DLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV-PSYVVLQNSLIDM 332
LF +L + N ++ + L A + L G +H+ +++ + VV+ N LIDM
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDM 201
Query: 333 YSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVT 392
Y KCG + + +F M+E+ +SWNA++ ++G+ L F M PD VT
Sbjct: 202 YGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP-----NPDTVT 256
Query: 393 MLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKK 452
++ G + + DM + P + ++ + + EA EF K
Sbjct: 257 YNELIDAFVKSGDFNNAFQVLSDMPN------PNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 453 MPF------EPTAAI------------WGSLLGACSVHSNVDIGVFVGHRLLEI 488
M E + +I WGSL+ AC+ +D V V L+++
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDM 364
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 125/465 (26%), Positives = 219/465 (47%), Gaps = 47/465 (10%)
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
Q H+LI K+ + SSL D+ + I + R +C R V S +++ + +
Sbjct: 33 QSHNLITKT-------ITSSLQDVLTR--PIWQNRSFVQC---RRVSSYAQMVNNHQSVT 80
Query: 268 LD-----------EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR 316
++ EAL++ L +G ++ + + +L+ + VH+ +
Sbjct: 81 IETFDALCKQVKIREALEVIDILEDKGYIVDFPRLLGLAKLCGEVEALEEARVVHDCITP 140
Query: 317 SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLEL 376
+ SY +++I+MYS C + + +F+ M +R +W M+ K+GEG +++
Sbjct: 141 LDARSY----HTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDM 196
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
FT EE KPD AV C G + GL F M G+ E Y V+++
Sbjct: 197 FTRFIEEGN-KPDKEIFKAVFFACVSIGDINEGLLHFESMYRD-YGMVLSMEDYVNVIEM 254
Query: 437 LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETG----- 491
L G ++EA +F+++M EP+ +W +L+ C V +++G + +++
Sbjct: 255 LAACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLDASRMSKE 314
Query: 492 -NAGNYFFLSXD--VRSLRDMMLKKAVMKEPGRSRIELDQVLHTFHASDRSHPRREEVYI 548
NAG + D + L+++ + + +P + +H F A D SH +
Sbjct: 315 SNAGLVAAKASDSAMEKLKELRYCQMIRDDPKKR-------MHEFRAGDTSHLGTVSAF- 366
Query: 549 KVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIK 608
+ L V+ + G+VP V+EE+KE+ LL S KLA + +I++ P+ V++
Sbjct: 367 --RSLKVQMLDIGFVPATRVCFVTVEEEEKEEQLLFRSNKLAFAHAIINSEARRPLTVLQ 424
Query: 609 NLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
N+R C+D HN K IS I GR + RDK ++H G CSC DYW
Sbjct: 425 NMRTCIDGHNTFKMISLITGRALIQRDKKKYHFYKNGVCSCKDYW 469
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 89 GHDMKFKGYNALLNECVSKRALREGQRVHAHM--IKTRYLPSVFLRTRLIVLYTKCDSLR 146
G+ + F L C AL E + VH + + R +V I +Y+ C S
Sbjct: 107 GYIVDFPRLLGLAKLCGEVEALEEARVVHDCITPLDARSYHTV------IEMYSGCRSTD 160
Query: 147 DARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV 201
DA +VF+EMP+RN +W MI ++ G +A+++F + + G +P++ F V
Sbjct: 161 DALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAV 215
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 188/393 (47%), Gaps = 29/393 (7%)
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLA-------SLDHGKQVHNHVLRSEVPSYV 323
EA+++ L +G YA L L GLA +L+ + VH ++ P V
Sbjct: 102 EAVEVLDYLENKG-------YAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDV 154
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+N++I+MYS C ++ + ++F+ M E + M+ + +G G E ++LFT +EE
Sbjct: 155 GARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEE 214
Query: 384 NEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRV 443
KP+G V S C+ G G F M + G+ P EHY V +L +G +
Sbjct: 215 GN-KPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYR-EYGIVPSMEHYHSVTKMLATSGHL 272
Query: 444 EEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFLSXDV 503
+EA F+++MP EP+ +W +L+ VH +V++G + +++ D
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDATR--------LDK 324
Query: 504 RSLRDMMLKKA---VMKEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEA 560
S ++ KA V KEP +R E TF D SHP+ +Y + L + KE
Sbjct: 325 VSSAGLVATKASDFVKKEPS-TRSE-PYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEM 382
Query: 561 GYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGVPIRVIKNLRICVDCHNFA 620
GYVPD + + ++ + G+ E++A+ L+ + I ++ N+RI DCH+
Sbjct: 383 GYVPDTRYYRSLIMAMENKEQIFGYREEIAVVESLLKSKPRSAITLLTNIRIVGDCHDMM 442
Query: 621 KYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
K +S I GR++ RD +H G C C + W
Sbjct: 443 KLMSVITGRDMIKRDAKIYHLFKNGVCRCNNLW 475
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Query: 89 GHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDA 148
G+ M L C AL + VH +I V R +I +Y+ C S+ DA
Sbjct: 114 GYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDA 173
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--MLG 206
VF+EMPE N + M+ + GY +A++LF + G +PN F V S L
Sbjct: 174 LKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLT 233
Query: 207 RQIH--SLIIKSNYDAHVYVGS-----SLLDMYAKDGKIHEARGIFECLP 249
+ SL ++ Y + V S S+ M A G + EA E +P
Sbjct: 234 GDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMP 283
>AT1G47580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:17485668-17486387 FORWARD
LENGTH=239
Length = 239
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 81/111 (72%)
Query: 543 REEVYIKVKELSVRFKEAGYVPDLSCVLHDVDEEQKEKILLGHSEKLALSFGLISTPEGV 602
R + Y+K+K L ++AGYVP+ VLHD+DEE KEK L+ HSE+LA++FG+I+TP G
Sbjct: 129 RSKAYVKLKSLGKEVRDAGYVPETKYVLHDIDEEAKEKALMHHSERLAIAFGIINTPPGT 188
Query: 603 PIRVIKNLRICVDCHNFAKYISKIYGREVSLRDKNRFHQIVGGKCSCGDYW 653
IRV+KNLRIC DCHNF K +S I RE+ +RD RFH G CSCGDYW
Sbjct: 189 TIRVMKNLRICGDCHNFIKILSSIEDREIIVRDNKRFHHFRDGNCSCGDYW 239
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 162/349 (46%), Gaps = 27/349 (7%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNL 182
P V + +I K + DA ++F EM + NVV+++++IS G S A L
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 183 FVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAK 234
M+ P+ FTF+ + +++ ++K + D + SSL++ +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 235 DGKIHEARGIFE------CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNY 288
++ EA+ +FE C P DVV+ +I G+ + EE +++FR++ G+ N
Sbjct: 374 HDRLDEAKQMFEFMVSKHCFP--DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 431
Query: 289 VTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
VTY ++ L D +++ ++ VP ++ N+L+D K G L + +F+
Sbjct: 432 VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEY 491
Query: 349 MQ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGG 404
+Q E T+ ++N M+ G K G+ + +LF + + VKPD V ++SG G
Sbjct: 492 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKG 550
Query: 405 LEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
++ +F +M G P Y ++ R G E + E IK+M
Sbjct: 551 SKEEADALFKEMKED--GTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 186/421 (44%), Gaps = 75/421 (17%)
Query: 97 YNALLNECVSKRA-LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
Y+ L+N C +R+ L V M+K Y P++ + L+ Y + +A + D+M
Sbjct: 119 YSILIN-CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 156 ----PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHS 211
+ N V++ +I AS+A+ L +M+ G +P+ T+ V ++
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV-------VNG 230
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
L + + D + +LL+ + GK+ E V+ II G + ++
Sbjct: 231 LCKRGDTD----LAFNLLNKMEQ-GKL-----------EPGVLIYNTIIDGLCKYKHMDD 274
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL+LF+++ +G++ N VTY+S+++ L ++ + ++ ++ V ++LID
Sbjct: 275 ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALID 334
Query: 332 MYSKCGNLTYSRRIFDTMQERT-------------------------------------- 353
+ K G L + +++D M +R+
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 354 -VMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
V+++N ++ G+ K+ E +E+F M + V + VT ++ G G D +I
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEI 453
Query: 413 FYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPTAAIWGSLL-GA 468
F +M S GV P Y ++D L + G++E+A FE++++ EPT + ++ G
Sbjct: 454 FKEMVSD--GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 469 C 469
C
Sbjct: 512 C 512
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 162/354 (45%), Gaps = 23/354 (6%)
Query: 120 MIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGY 175
M K + V + T +I ++ DA ++F EM + NVV++ ++I G
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 176 ASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSS 227
S A L M+ PN TF+ + +++ +IK + D ++ SS
Sbjct: 306 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 365
Query: 228 LLDMYAKDGKIHEARGIFECLPERD----VVSCTAIISGYAQLGLDEEALDLFRQLRGEG 283
L++ + ++ EA+ +FE + +D VV+ +I G+ + EE ++LFR++ G
Sbjct: 366 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 284 MQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSR 343
+ N VTY +++ L D +++ ++ VP ++ + L+D K G L +
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 344 RIFDTMQ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG 399
+F+ +Q E + ++N M+ G K G+ + +LF + + VKP+ + ++SG
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTTMISG 544
Query: 400 CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
GL++ +F +M G P Y ++ R G + E IK+M
Sbjct: 545 FCRKGLKEEADALFREMKED--GTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 178/421 (42%), Gaps = 75/421 (17%)
Query: 97 YNALLNECVSKRA-LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
YN L+N C +R+ L V M+K Y P + + L+ Y + +A + D+M
Sbjct: 118 YNILIN-CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 156 ----PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHS 211
+ N V++ +I AS+A+ L +M+ G +P+ FT+ TV + L ++
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR--- 233
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
+ + SLL K GKI E DVV T II +
Sbjct: 234 --------GDIDLALSLLKKMEK-GKI-----------EADVVIYTTIIDALCNYKNVND 273
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL+LF ++ +G++ N VTY S++ L ++ + ++ ++ VV ++LID
Sbjct: 274 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 333
Query: 332 MYSKCGNLTYSRRIFDTMQERT-------------------------------------- 353
+ K G L + +++D M +R+
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 354 -VMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
V+++N ++ G+ K E +ELF M + V + VT ++ G G D I
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG-NTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 413 FYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPTAAIWGSLL-GA 468
F M S GV P Y ++D L + G++E+A FE+++K EP + ++ G
Sbjct: 453 FKKMVSD--GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGM 510
Query: 469 C 469
C
Sbjct: 511 C 511
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 172/370 (46%), Gaps = 26/370 (7%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPE----RNVVSWTAMIS 168
+R+ Y +V+ + LI Y + +A VF+ M E N+V++ A+I
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 169 AYSQRGYA-SQALNLFVQMLRSGTEPNEFTFATVXSM--------LGRQIHSLIIKSNYD 219
A + G Q F +M R+G +P+ TF ++ ++ R + + +
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 220 AHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGLDEEALDL 275
V+ ++LLD K G++ A I +P + +VVS + +I G+A+ G +EAL+L
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 276 FRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSK 335
F ++R G+ + V+Y ++L+ + + + + + + VV N+L+ Y K
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 336 CGNLTYSRRIFDTMQERTVM----SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGV 391
G +++F M+ V+ +++ ++ GY K G +E +E+F + ++ D V
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAG-LRADVV 550
Query: 392 TMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIK 451
A++ GL + + +MT K G+ P Y ++D GR+ ++ + ++
Sbjct: 551 LYSALIDALCKNGLVGSAVSLIDEMT--KEGISPNVVTYNSIIDAFGRSATMDRSADYSN 608
Query: 452 --KMPFEPTA 459
+PF +A
Sbjct: 609 GGSLPFSSSA 618
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 157/340 (46%), Gaps = 29/340 (8%)
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR---------QIH 210
V +++A+ISAY + G +A+++F M G PN T+ V G+ +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP----ERDVVSCTAIISGYAQL 266
+ ++ +SLL + ++ G AR +F+ + E+DV S ++ +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKG 387
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G + A ++ Q+ + + N V+Y++V+ + D + + + V
Sbjct: 388 GQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSY 447
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQE-------RTVMSWNAMLVGYGKHGEGREVLELFTL 379
N+L+ +Y+K G S D ++E + V+++NA+L GYGK G+ EV ++FT
Sbjct: 448 NTLLSIYTKVGR---SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 380 MREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGR 439
M+ E+ V P+ +T ++ G S GGL ++IF + S G+ Y ++D L +
Sbjct: 505 MKREH-VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSA--GLRADVVLYSALIDALCK 561
Query: 440 AGRVEEAFEFIKKMPFE---PTAAIWGSLLGACSVHSNVD 476
G V A I +M E P + S++ A + +D
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMD 601
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 160/349 (45%), Gaps = 48/349 (13%)
Query: 97 YNALLNECVSKRALREGQR-VHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
+N+LL C S+ L E R + M R VF L+ K + A + +M
Sbjct: 342 FNSLLAVC-SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 156 PER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM---LGRQ 208
P + NVVS++ +I +++ G +ALNLF +M G + ++ T+ S+ +GR
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 209 IHSLII-----KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE------CLPERDVVSCT 257
+L I V ++LL Y K GK E + +F LP ++++ +
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLP--NLLTYS 518
Query: 258 AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
+I GY++ GL +EA+++FR+ + G++++ V Y++++ AL + + + + +
Sbjct: 519 TLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Query: 318 EVPSYVVLQNSLIDM------------YSKCGNLTYSRRIFDTMQE----RTVMSWNAML 361
+ VV NS+ID YS G+L +S + E R + + +
Sbjct: 579 GISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLT 638
Query: 362 VGYGKHG-----EGRE----VLELFTLMREENEVKPDGVTMLAVLSGCS 401
EG + +LE+F M + E+KP+ VT A+L+ CS
Sbjct: 639 TESNNRTTKDCEEGMQELSCILEVFRKMHQL-EIKPNVVTFSAILNACS 686
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 117/239 (48%), Gaps = 12/239 (5%)
Query: 224 VGSSLLDMYAKDGKIHEARGIFECLPE----RDVVSCTAIISGYAQLGLDEEALDLFRQL 279
+ S+++ + GK+ A+ IFE V + +A+IS Y + GL EEA+ +F +
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 280 RGEGMQSNYVTYASVLTALS-GLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGN 338
+ G++ N VTY +V+ A G + + + R+ V + NSL+ + S+ G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 339 LTYSRRIFDTMQ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTML 394
+R +FD M E+ V S+N +L K G+ E+ M + + P+ V+
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK-RIMPNVVSYS 413
Query: 395 AVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
V+ G + G D L++F +M +G+ + Y ++ + + GR EEA + +++M
Sbjct: 414 TVIDGFAKAGRFDEALNLFGEMR--YLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 100/238 (42%), Gaps = 38/238 (15%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L +MA G YNALL + E ++V M + LP++ + LI Y+K
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 142 CDSLRDARHVFDEMPE----RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT 197
++A +F E +VV ++A+I A + G A++L +M + G PN T
Sbjct: 527 GGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586
Query: 198 FATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCT 257
+ ++ GR S + + D Y+ G + + L E +
Sbjct: 587 YNSIIDAFGR---SATMDRSAD------------YSNGGSLPFSSSALSALTETE---GN 628
Query: 258 AIISGYAQL--------------GLDEEA--LDLFRQLRGEGMQSNYVTYASVLTALS 299
+I + QL G+ E + L++FR++ ++ N VT++++L A S
Sbjct: 629 RVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACS 686
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 192/419 (45%), Gaps = 70/419 (16%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRA-LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKC 142
+M + G YN ++N C+ +R+ L + M+K Y PS+ L+ +
Sbjct: 90 KMEILGVSHNLYTYNIMIN-CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 143 DSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF 198
+ + +A + D+M E + V++T ++ Q AS+A+ L +M+ G +P+ T+
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 199 ATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTA 258
V I+ L + D + +LL+ K GKI E DVV +
Sbjct: 209 GAV-------INGLCKRGEPD----LALNLLNKMEK-GKI-----------EADVVIYST 245
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
+I + ++AL+LF ++ +G++ + TY+S+++ L ++ + +L +
Sbjct: 246 VIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVL 374
+ VV NSLID ++K G L + ++FD M +R+ ++++N+++ G+ H E
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 375 ELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI------------- 421
++FTLM ++ + PD VT +++G G+++F DM+ +
Sbjct: 366 QIFTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 422 --------------------GVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEP 457
GV P Y ++D L + G++E+A FE+++K EP
Sbjct: 425 FFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 166/384 (43%), Gaps = 49/384 (12%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y+ +++ R + + + M P VF + LI DA + +M
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDML 302
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
ER NVV++ ++I A+++ G +A LF +M++ +PN T+
Sbjct: 303 ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY-------------- 348
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIF------ECLPERDVVSCTAIISGYAQL 266
+SL++ + ++ EA+ IF +CLP DVV+ +I+G+ +
Sbjct: 349 -------------NSLINGFCMHDRLDEAQQIFTLMVSKDCLP--DVVTYNTLINGFCKA 393
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
+ ++LFR + G+ N VTY +++ + D+ + V ++ V ++
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
N+L+D K G L + +F+ +Q E + ++N M G K G+ + +LF +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR 442
+ VKPD + ++SG GL++ +F M G P Y ++ R G
Sbjct: 514 KG-VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED--GPLPDSGTYNTLIRAHLRDGD 570
Query: 443 VEEAFEFIKKM---PFEPTAAIWG 463
+ E IK+M F A+ +G
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYG 594
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 177/392 (45%), Gaps = 47/392 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN ++N V +R + V M K + + T L+ L K + DA +FDEM
Sbjct: 262 YNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMR 321
Query: 157 ERNVVS----WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
ER + S +T++IS ++G +A LF ++ G P+ +T+
Sbjct: 322 ERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYG------------- 368
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV----VSCTAIISGYAQLGL 268
+L+D K G++ A + + + V V +I GY + G+
Sbjct: 369 --------------ALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+EA ++ + +G Q++ T ++ + + L D KQ ++ V V +
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGKHGEGREVLELFTLMREEN 384
LID+Y K GN+ ++R+F M + V +++N M+ Y K G+ +E +L M E N
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM-EAN 533
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
+ PD T +++ G D + +F +M G G++ Y ++ L +AG+ +
Sbjct: 534 GMDPDSYTYTSLIHGECIADNVDEAMRLFSEM--GLKGLDQNSVTYTVMISGLSKAGKSD 591
Query: 445 EAF---EFIKKMPFEPTAAIWGSLLGACSVHS 473
EAF + +K+ + ++ +L+G S+HS
Sbjct: 592 EAFGLYDEMKRKGYTIDNKVYTALIG--SMHS 621
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 159/349 (45%), Gaps = 26/349 (7%)
Query: 149 RHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ 208
R + D + V S T ++ +RG ++ L + G +P +T+ T+ + +Q
Sbjct: 213 RRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQ 272
Query: 209 -----IHSLIIKSNYDAHVY---VGSSLLDMYAKDGKIHEARGIFECLPER----DVVSC 256
+ ++ D VY + L+++ K+GK+ +A +F+ + ER DV
Sbjct: 273 RDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVY 332
Query: 257 TAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR 316
T++IS + G + A LF +L +G+ + TY +++ + + + + + N +
Sbjct: 333 TSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS 392
Query: 317 SEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGRE 372
V V+ N+LID Y + G + + I+D M+++ V + N + + + E
Sbjct: 393 KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDE 452
Query: 373 VLE-LFTLMREENEVKPDGVTMLAVLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
+ LF +M E VK V+ ++ C G +E+ +F +M+S GV+P Y
Sbjct: 453 AKQWLFRMM--EGGVKLSTVSYTNLIDVYCKEGNVEE-AKRLFVEMSSK--GVQPNAITY 507
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIWGSLLGACSVHSNVD 476
++ + G+++EA + M +P + + SL+ + NVD
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD 556
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 19/301 (6%)
Query: 151 VFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS------- 203
V D P NVV++ +I+ + +RG +A +LF M + G EP+ ++T+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 204 -MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL----PERDVVSCTA 258
+G ++ S + V V SS +D+Y K G + A +++ + +VV+ T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
+I G Q G EA ++ Q+ GM+ + VTY+S++ +L G ++ +++
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVL 374
P VV+ L+D SK G + ++ R M ++ V+ +N+++ G+ + E L
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 375 ELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVV 434
++F LM +KPD T V+ G + L +F+ M K+G+EP Y ++
Sbjct: 517 KVFRLMGIYG-IKPDVATFTTVMRVSIMEGRLEEALFLFFRMF--KMGLEPDALAYCTLI 573
Query: 435 D 435
D
Sbjct: 574 D 574
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/450 (19%), Positives = 186/450 (41%), Gaps = 61/450 (13%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
Y+ L++ L G ++ + + V + + I +Y K L A V+ M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 156 ----PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML------ 205
NVV++T +I Q G +A ++ Q+L+ G EP+ T++++
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 206 --GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDG-KIHEARGIFECLPER---DVVSCTAI 259
G ++ +IK Y V + L+D +K G +H R + L + +VV ++
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL------------------------ 295
I G+ +L +EAL +FR + G++ + T+ +V+
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 296 --TALSGLASLDH---------GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRR 344
AL+ +D G Q+ + + R+++ + + + N +I + KC + + +
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK 622
Query: 345 IFDTM----QERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
F+ + E ++++N M+ GY E +F L++ P+ VT+ ++
Sbjct: 623 FFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV-TPFGPNTVTLTILIHVL 681
Query: 401 SHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP---FEP 457
D + +F M G +P YGC++D ++ +E +F+ ++M P
Sbjct: 682 CKNNDMDGAIRMFSIMAEK--GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739
Query: 458 TAAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
+ + ++ VD + H+ ++
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAID 769
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 244 IFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLAS 303
+ +C P +VV+ +I+G+ + G + A DLF+ + G++ + + Y++++
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 304 LDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ----ERTVMSWNA 359
L G ++ + L V VV+ +S ID+Y K G+L + ++ M V+++
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 360 MLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG-CSHGGLEDRGLDIFYDMTS 418
++ G + G E ++ + + ++P VT +++ G C G L G ++ DM
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRG-MEPSIVTYSSLIDGFCKCGNLRS-GFALYEDMI- 453
Query: 419 GKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
K+G P YG +VD L + G + A F KM
Sbjct: 454 -KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 143/335 (42%), Gaps = 22/335 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y L++ + + R M+ +V + LI + + + +A VF M
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523
Query: 157 ----ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--------M 204
+ +V ++T ++ G +AL LF +M + G EP+ + T+
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPT 583
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL----PERDVVSCTAII 260
+G Q+ L+ ++ A + V + ++ + K +I +A F L E D+V+ +I
Sbjct: 584 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP 320
GY L +EA +F L+ N VT ++ L +D ++ + +
Sbjct: 644 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSK 703
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLEL 376
V L+D +SK ++ S ++F+ MQE+ +++S++ ++ G K G E +
Sbjct: 704 PNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Query: 377 FTLMREENEVKPDGVTMLAVLSG-CSHGGLEDRGL 410
F + ++ PD V ++ G C G L + L
Sbjct: 764 FH-QAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 135 LIVLYTKCDSLRDARHVFDEM----PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSG 190
+I L KC + DA F+ + E ++V++ MI Y +A +F + +
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 191 TEPNEFTFATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEAR 242
PN T + +L + ++ S++ + + L+D ++K I +
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 243 GIFECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTAL 298
+FE + E+ +VS + II G + G +EA ++F Q + + V YA ++
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 299 SGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
+ L ++ H+LR+ V +LQ +L
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 156/329 (47%), Gaps = 27/329 (8%)
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---GR-----Q 208
E +VV + +I + + A +LF +M G +P+ FT+ + S L GR +
Sbjct: 247 EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASR 306
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE-------CLPERDVVSCTAIIS 261
+ S +++ N + + ++L+D + K+GK+ EA +++ C P DVV+ +I
Sbjct: 307 LLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP--DVVAYNTLIK 364
Query: 262 GYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPS 321
G+ + EE +++FR++ G+ N VTY +++ D+ + V ++ V
Sbjct: 365 GFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHP 424
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELF 377
++ N L+D GN+ + +F+ MQ+R ++++ M+ K G+ + +LF
Sbjct: 425 DIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
+ + VKP+ VT ++SG GL++ +F +M G P Y ++
Sbjct: 485 CSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED--GPLPNSGTYNTLIRAR 541
Query: 438 GRAGRVEEAFEFIKKM---PFEPTAAIWG 463
R G + E IK+M F A+ +G
Sbjct: 542 LRDGDEAASAELIKEMRSCGFAGDASTFG 570
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 175/407 (42%), Gaps = 38/407 (9%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
QM G Y+ +N + L + M+K Y PS+ L+ + +
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159
Query: 144 SLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
+ +A + D+M E + V++T ++ Q AS+A+ L +M+ G +P+ T+
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219
Query: 200 TVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI 259
V I+ L + D + +LL+ K GKI E DVV I
Sbjct: 220 AV-------INGLCKRGEPD----LALNLLNKMEK-GKI-----------EADVVIYNTI 256
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
I G + ++A DLF ++ +G++ + TY +++ L ++ + +L +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT-----VMSWNAMLVGYGKHGEGREVL 374
+V N+LID + K G L + +++D M + V+++N ++ G+ K+ E +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 375 ELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVV 434
E+F M + V + VT ++ G D +F M S GV P Y ++
Sbjct: 377 EVFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQMVSD--GVHPDIMTYNILL 433
Query: 435 DLLGRAGRVEEA---FEFIKKMPFEPTAAIWGSLLGACSVHSNVDIG 478
D L G VE A FE+++K + + +++ A V+ G
Sbjct: 434 DGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 17/218 (7%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRY-LPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
+NAL++ V + L E ++++ M+K+++ P V LI + K + + VF EM
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
Query: 156 PER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---GRQ 208
+R N V++T +I + Q A +F QM+ G P+ T+ + L G
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442
Query: 209 IHSLII-----KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAI 259
+L++ K + + +++++ K GK+ + +F L + +VV+ T +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA 297
+SG+ + GL EEA LF +++ +G N TY +++ A
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 143/301 (47%), Gaps = 16/301 (5%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y+ L E + R + H++K+ P++ RL++++ C L R +FD MP
Sbjct: 91 YSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMP 150
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE-----PNEFTFATVXSM------- 204
R+ SW + + G A LFV ML+ + P+ + +
Sbjct: 151 HRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFE 210
Query: 205 LGRQIHSLIIKSNY--DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 262
LG+Q+H+L K + + Y+ SL+ Y + + +A + L + V+ A ++
Sbjct: 211 LGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTN 270
Query: 263 YAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH-GKQVHNHVLRSEVPS 321
+ G +E + F ++ G++ N +++VL A S ++ G+QVH + ++ S
Sbjct: 271 DYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFES 330
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS-WNAMLVGYGKHGEGREVLELFTLM 380
+++ LI+MY K G + + ++F + ++ T +S WNAM+ Y ++G E ++L M
Sbjct: 331 DCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQM 390
Query: 381 R 381
+
Sbjct: 391 K 391
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 12/199 (6%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYL--PSVFLRTRLIVLYTKCDSLRDARHVFDEMPE 157
+L C R G++VHA K ++ +L LI Y + L DA V ++
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSN 258
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---------GRQ 208
N V+W A ++ + G + + F++M G + N F+ V G+Q
Sbjct: 259 ANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQ 318
Query: 209 IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSC-TAIISGYAQLG 267
+H+ IK +++ + L++MY K GK+ +A +F+ + VSC A+++ Y Q G
Sbjct: 319 VHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Query: 268 LDEEALDLFRQLRGEGMQS 286
+ EA+ L Q++ G+++
Sbjct: 379 IYIEAIKLLYQMKATGIKA 397
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 111 REGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERNVVS-WTAMISA 169
R GQ+VHA+ IK + +R RLI +Y K ++DA VF + VS W AM+++
Sbjct: 314 RSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVAS 373
Query: 170 YSQRGYASQALNLFVQMLRSGTEPNE 195
Y Q G +A+ L QM +G + ++
Sbjct: 374 YMQNGIYIEAIKLLYQMKATGIKAHD 399
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 20/272 (7%)
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLG 267
Q+H I+KS+ + + LL M+ G++ R +F+ +P RD S + G ++G
Sbjct: 111 QVH--IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 268 LDEEALDLFRQLRGEGMQSNY----VTYASVLTALSGLASLDHGKQVHN--HVLR--SEV 319
E+A LF + + + VL A + + + GKQVH H L E
Sbjct: 169 DYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEE 228
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTL 379
SY L SLI Y + L + + + ++W A + + GE +EV+ F
Sbjct: 229 DSY--LSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIE 286
Query: 380 MREENEVKPDGVTMLAVLSGCS---HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
M +K + VL CS GG + + + K+G E ++++
Sbjct: 287 MGNHG-IKKNVSVFSNVLKACSWVSDGGRSGQQVH----ANAIKLGFESDCLIRCRLIEM 341
Query: 437 LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGA 468
G+ G+V++A + K E + + W +++ +
Sbjct: 342 YGKYGKVKDAEKVFKSSKDETSVSCWNAMVAS 373
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 163/348 (46%), Gaps = 31/348 (8%)
Query: 151 VFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS------- 203
V D P NVV++ +I+ + +RG +A +LF M + G EP+ ++T+
Sbjct: 277 VLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGM 336
Query: 204 -MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL----PERDVVSCTA 258
+G ++ S + V V SS +D+Y K G + A +++ + +VV+ T
Sbjct: 337 LGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTI 396
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
+I G Q G EA ++ Q+ GM+ + VTY+S++ +L G ++ +++
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVL 374
P VV+ L+D SK G + ++ R M ++ V+ +N+++ G+ + E L
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 375 ELFTLMREENEVKPDGVTMLAVL-------SGCSHGGLEDRGLDIFYDMTSGKIGVEPKK 427
++F LM +KPD T V+ + C H GL +F M KI +
Sbjct: 517 KVFRLMGIYG-IKPDVATFTTVMRVSIMEDAFCKHMK-PTIGLQLFDLMQRNKISADIAV 574
Query: 428 EHYGCVVDLLGRAGRVEEAFEFIKKM---PFEPTAAIWGSLL-GACSV 471
+ V+ LL + R+E+A +F + EP + +++ G CS+
Sbjct: 575 CN--VVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 185/421 (43%), Gaps = 32/421 (7%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
Y+ L++ L G ++ + + V + + I +Y K L A V+ M
Sbjct: 323 AYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM 382
Query: 156 ----PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML------ 205
NVV++T +I Q G +A ++ Q+L+ G EP+ T++++
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 206 --GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDG-KIHEARGIFECLPER---DVVSCTAI 259
G ++ +IK Y V + L+D +K G +H R + L + +VV ++
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL-TALSGLASLDH-----GKQVHNH 313
I G+ +L +EAL +FR + G++ + T+ +V+ ++ A H G Q+ +
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM----QERTVMSWNAMLVGYGKHGE 369
+ R+++ + + + N +I + KC + + + F+ + E ++++N M+ GY
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEH 429
E +F L++ P+ VT+ ++ D + +F M G +P
Sbjct: 623 LDEAERIFELLKV-TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK--GSKPNAVT 679
Query: 430 YGCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIWGSLLGACSVHSNVDIGVFVGHRLL 486
YGC++D ++ +E +F+ ++M P+ + ++ VD + H+ +
Sbjct: 680 YGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 487 E 487
+
Sbjct: 740 D 740
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 149/341 (43%), Gaps = 28/341 (8%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK----CDSLRDARHVF 152
Y++L++ LR G ++ MIK Y P V + L+ +K ++R + +
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 153 DEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM-------- 204
+ NVV + ++I + + +AL +F M G +P+ TF TV +
Sbjct: 489 GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFC 548
Query: 205 ------LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE----RDVV 254
+G Q+ L+ ++ A + V + ++ + K +I +A F L E D+V
Sbjct: 549 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 608
Query: 255 SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV 314
+ +I GY L +EA +F L+ N VT ++ L +D ++ + +
Sbjct: 609 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIM 668
Query: 315 LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEG 370
V L+D +SK ++ S ++F+ MQE+ +++S++ ++ G K G
Sbjct: 669 AEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRV 728
Query: 371 REVLELFTLMREENEVKPDGVTMLAVLSG-CSHGGLEDRGL 410
E +F + ++ PD V ++ G C G L + L
Sbjct: 729 DEATNIFH-QAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 768
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 92/211 (43%), Gaps = 16/211 (7%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPE----RNVVSWTAMISAYSQRGYASQALNLFVQMLRSG 190
+I L KC + DA F+ + E ++V++ MI Y +A +F + +
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 191 TEPNEFTFATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEAR 242
PN T + +L + ++ S++ + + L+D ++K I +
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 243 GIFECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTAL 298
+FE + E+ +VS + II G + G +EA ++F Q + + V YA ++
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 299 SGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
+ L ++ H+LR+ V +LQ +L
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 147/312 (47%), Gaps = 27/312 (8%)
Query: 131 LRTRLIVLYTKCDSL------RDARHVFDEMPER----NVVSWTAMISAYSQRGYASQAL 180
+ +++ T DSL DA ++F EM + NV++++++IS S A
Sbjct: 256 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDAS 315
Query: 181 NLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMY 232
L M+ PN TF + +++ +IK + D ++ SSL++ +
Sbjct: 316 RLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 233 AKDGKIHEARGIFECLPERD----VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNY 288
++ EA+ +FE + +D VV+ +I+G+ + +E ++LFR++ G+ N
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 289 VTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
VTY +++ D+ + V ++ V ++ N+L+D K G L + +F+
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 349 MQ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGG 404
+Q E T+ ++N M+ G K G+ + +LF + + VKPD + ++SG G
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIIYNTMISGFCRKG 554
Query: 405 LEDRGLDIFYDM 416
L++ +F M
Sbjct: 555 LKEEADALFRKM 566
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 188/418 (44%), Gaps = 69/418 (16%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN L+N + + + M+K Y PS+ + L+ Y + DA + D+M
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
E + +++T +I AS+A+ L +M++ G +PN T+ V + L ++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR---- 238
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEA 272
+ + +LL+ K+ A+ E +VV + +I + +++A
Sbjct: 239 -------GDIDLAFNLLN------KMEAAK------IEANVVIYSTVIDSLCKYRHEDDA 279
Query: 273 LDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDM 332
L+LF ++ +G++ N +TY+S+++ L ++ + ++ ++ VV N+LID
Sbjct: 280 LNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDA 339
Query: 333 YSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
+ K G L + +++D M +R+ + ++++++ G+ H E +F LM + + P
Sbjct: 340 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFP 398
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI--------------------------- 421
+ VT +++G D G+++F +M+ +
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 422 ------GVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPTAAIWGSLL-GAC 469
GV P Y ++D L + G++E+A FE++++ EPT + ++ G C
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 146/316 (46%), Gaps = 21/316 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y+ +++ R + + M P+V + LI + DA + +M
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML------- 205
ER NVV++ A+I A+ + G +A L+ +M++ +P+ FT++++ +
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 206 -GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAII 260
+ + L+I + +V ++L++ + K +I E +F + +R + V+ T +I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP 320
G+ Q + A +F+Q+ +G+ N +TY ++L L L+ V ++ RS++
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLEL 376
+ N +I+ K G + +F ++ + V+ +N M+ G+ + G E L
Sbjct: 503 PTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADAL 562
Query: 377 FTLMREENEVKPDGVT 392
F MRE+ + PD T
Sbjct: 563 FRKMREDGPL-PDSGT 577
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 160/369 (43%), Gaps = 42/369 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN +++ + + + + M P VF + LI DA + +M
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
ER NVV+++A+I A+ + G +A L+ +M++ +P+ FT+
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY-------------- 366
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERD----VVSCTAIISGYAQLGL 268
SSL++ + ++ EA+ +FE + +D VV+ + +I G+ +
Sbjct: 367 -------------SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
EE ++LFR++ G+ N VTY +++ D+ + V ++ V ++ N
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
L+D K G L + +F+ +Q T + ++N M+ G K G+ + ELF + +
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
V P+ + ++SG G ++ + M G P Y ++ R G E
Sbjct: 534 -VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED--GPLPNSGTYNTLIRARLRDGDRE 590
Query: 445 EAFEFIKKM 453
+ E IK+M
Sbjct: 591 ASAELIKEM 599
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 187/432 (43%), Gaps = 71/432 (16%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRA-LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKC 142
QM G Y+ +N C +R+ L V A M+K Y P + + L+ Y
Sbjct: 108 QMQTLGISHDLYTYSIFIN-CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 143 DSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF 198
+ DA + D+M E + ++T +I AS+A+ L QM++ G +P+ T+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 199 ATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTA 258
TV + L ++ + + SLL K GKI E DVV
Sbjct: 227 GTVVNGLCKR-----------GDIDLALSLLKKMEK-GKI-----------EADVVIYNT 263
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
II G + ++AL+LF ++ +G++ + TY+S+++ L ++ + ++ +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVL 374
+ VV ++LID + K G L + +++D M +R+ + ++++++ G+ H E
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 375 ELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG--------------- 419
+F LM + + P+ VT ++ G + G+++F +M+
Sbjct: 384 HMFELMISK-DCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHG 442
Query: 420 ------------------KIGVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPT 458
+GV P Y ++D L + G++ +A FE++++ EP
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 459 AAIWGSLL-GAC 469
+ ++ G C
Sbjct: 503 IYTYNIMIEGMC 514
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/447 (21%), Positives = 203/447 (45%), Gaps = 65/447 (14%)
Query: 82 LLQMALCGHDMKFKGYNALLNE-CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYT 140
L +M G++ ++LLN C SKR + + + M++ Y P F T LI
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKR-ISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 141 KCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRG---------------------- 174
+ +A + D+M +R ++V++ +++ +RG
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 175 -------------YASQALNLFVQMLRSGTEPNEFTFATVXSML---GR-----QIHSLI 213
+ ALNLF +M G P+ FT++++ S L GR ++ S +
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 214 IKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGLD 269
I+ + +V S+L+D + K+GK+ EA +++ + +R D+ + +++I+G+
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 270 EEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSL 329
+EA +F + + N VTY++++ ++ G ++ + + + V +L
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 330 IDMYSKCGNLTYSRRIFDTMQE----RTVMSWNAMLVGYGKHGEGREVLELFTLMREENE 385
I + + + ++ +F M ++++N +L G K+G+ + + +F + + +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL-QRST 498
Query: 386 VKPDGVTMLAVLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
++PD T ++ G C G +ED G ++F +++ GV P Y ++ R G E
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVED-GWELFCNLSLK--GVSPNVIAYNTMISGFCRKGSKE 555
Query: 445 EAFEFIKKMPFE---PTAAIWGSLLGA 468
EA +KKM + P + + +L+ A
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRA 582
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 171/390 (43%), Gaps = 33/390 (8%)
Query: 88 CGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRD 147
CG D+ Y L++ + R L + V M R+ P L+ ++ L
Sbjct: 289 CGPDVV--TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDS 346
Query: 148 ARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
+ + EM + +VV++T ++ A + G +A + M G PN T+ T+
Sbjct: 347 VKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLIC 406
Query: 204 MLGR------------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
L R + SL +K A+ Y+ +D Y K G A FE + +
Sbjct: 407 GLLRVHRLDDALELFGNMESLGVKPT--AYTYI--VFIDYYGKSGDSVSALETFEKMKTK 462
Query: 252 ----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG 307
++V+C A + A+ G D EA +F L+ G+ + VTY ++ S + +D
Sbjct: 463 GIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEA 522
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVG 363
++ + ++ + V++ NSLI+ K + + ++F M+E TV+++N +L G
Sbjct: 523 IKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Query: 364 YGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGV 423
GK+G+ +E +ELF M ++ P+ +T + L + + M +G
Sbjct: 583 LGKNGKIQEAIELFEGMVQKG-CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMD--MGC 639
Query: 424 EPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
P Y ++ L + G+V+EA F +M
Sbjct: 640 VPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 177/419 (42%), Gaps = 36/419 (8%)
Query: 79 QQP--LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLI 136
Q P L +M G + YN L++ + R E V+ MI + PS+ + L+
Sbjct: 171 QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLM 230
Query: 137 VLYTKCDSLRDARHVFDEMP----ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTE 192
V K + + EM + NV ++T I + G ++A + +M G
Sbjct: 231 VGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCG 290
Query: 193 PNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGI 244
P+ T+ + L +++ + + +LLD ++ + + +
Sbjct: 291 PDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 245 FECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSG 300
+ + + DVV+ T ++ + G EA D +R +G+ N TY +++ L
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 301 LASLDHGKQVHNHV----LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER---- 352
+ LD ++ ++ ++ +Y+V ID Y K G+ + F+ M+ +
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIV----FIDYYGKSGDSVSALETFEKMKTKGIAP 466
Query: 353 TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
+++ NA L K G RE ++F +++ V PD VT ++ S G D + +
Sbjct: 467 NIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV-PDSVTYNMMMKCYSKVGEIDEAIKL 525
Query: 413 FYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEF---IKKMPFEPTAAIWGSLLGA 468
+M G EP +++ L +A RV+EA++ +K+M +PT + +LL
Sbjct: 526 LSEMMEN--GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAG 582
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 163/369 (44%), Gaps = 40/369 (10%)
Query: 97 YNALLNECVSKRA-LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
YN ++ +C SK + E ++ + M++ P V + LI K D + +A +F M
Sbjct: 506 YNMMM-KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 156 PER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIH- 210
E VV++ +++ + G +A+ LF M++ G PN TF T+ L +
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEV 624
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDE 270
+L +K + ++DM C+P DV + II G + G +
Sbjct: 625 TLALKMLF--------KMMDM--------------GCVP--DVFTYNTIIFGLVKNGQVK 660
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLR--SEVPSYVVLQNS 328
EA+ F Q++ + + ++VT ++L + + ++ ++ + L ++ P+ + ++
Sbjct: 661 EAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 329 LIDMYSKCG---NLTYSRRIFDTMQERTVMSWNAMLVGYG-KHGEGREVLELFTLMREEN 384
+ + ++ G +++S R+ R S ++ Y KH LF ++
Sbjct: 720 IGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL 779
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
V+P T ++ G + + D+F + S G P Y ++D G++G+++
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS--TGCIPDVATYNFLLDAYGKSGKID 837
Query: 445 EAFEFIKKM 453
E FE K+M
Sbjct: 838 ELFELYKEM 846
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 12/213 (5%)
Query: 247 CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH 306
C+P DV + ++ Y + G +E +L++++ ++N +T+ V++ L ++D
Sbjct: 816 CIP--DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 307 GKQVHNHVL--RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAM 360
++ ++ R P+ LID SK G L ++++F+ M + +N +
Sbjct: 874 ALDLYYDLMSDRDFSPT-ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNIL 932
Query: 361 LVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGK 420
+ G+GK GE LF M +E V+PD T ++ G D GL F ++
Sbjct: 933 INGFGKAGEADAACALFKRMVKEG-VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES- 990
Query: 421 IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
G+ P Y +++ LG++ R+EEA +M
Sbjct: 991 -GLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/357 (19%), Positives = 145/357 (40%), Gaps = 46/357 (12%)
Query: 89 GHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDA 148
G K YN L+ + + Q V + T +P V L+ Y K + +
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 149 RHVFDEMP----ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM 204
++ EM E N ++ +IS + G AL+L+
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY--------------------- 878
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE------CLPERDVVSCTA 258
+ L+ ++ L+D +K G+++EA+ +FE C P + +
Sbjct: 879 -----YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN--I 931
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
+I+G+ + G + A LF+++ EG++ + TY+ ++ L + +D G + S
Sbjct: 932 LINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESG 991
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER-----TVMSWNAMLVGYGKHGEGREV 373
+ VV N +I+ K L + +F+ M+ + ++N++++ G G E
Sbjct: 992 LNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEA 1051
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
+++ ++ ++P+ T A++ G S G + ++ M +G G P Y
Sbjct: 1052 GKIYNEIQRAG-LEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG--GFSPNTGTY 1105
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 88/200 (44%), Gaps = 8/200 (4%)
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
+I G + + E A D+F Q++ G + TY +L A +D +++ + E
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE 850
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRI-FDTMQER----TVMSWNAMLVGYGKHGEGREV 373
+ + N +I K GN+ + + +D M +R T ++ ++ G K G E
Sbjct: 851 CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCV 433
+LF M + +P+ +++G G D +F M K GV P + Y +
Sbjct: 911 KQLFEGMLDYG-CRPNCAIYNILINGFGKAGEADAACALFKRMV--KEGVRPDLKTYSVL 967
Query: 434 VDLLGRAGRVEEAFEFIKKM 453
VD L GRV+E + K++
Sbjct: 968 VDCLCMVGRVDEGLHYFKEL 987
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 139/329 (42%), Gaps = 23/329 (6%)
Query: 145 LRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFAT 200
L + +VFD M +R + ++ + + S +G QA +M G N +++
Sbjct: 134 LEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNG 193
Query: 201 VXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP--- 249
+ +L +++ +I + + SSL+ K I G+ + +
Sbjct: 194 LIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLG 253
Query: 250 -ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGK 308
+ +V + T I + G EA ++ +++ EG + VTY ++ AL LD K
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAK 313
Query: 309 QVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGY 364
+V + V +L+D +S +L ++ + M++ V+++ ++
Sbjct: 314 EVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 365 GKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVE 424
K G E + +MR++ + P+ T ++ G D L++F +M S +GV+
Sbjct: 374 CKAGNFGEAFDTLDVMRDQG-ILPNLHTYNTLICGLLRVHRLDDALELFGNMES--LGVK 430
Query: 425 PKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
P Y +D G++G A E +KM
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKM 459
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 184/406 (45%), Gaps = 38/406 (9%)
Query: 80 QPLLQMALCGHDMKFK------GYNALLNE-CVSKRALREGQRVHAHMIKTRYLPSVFLR 132
QP L + G MK + +L+N C+ R + E + M++ P V +
Sbjct: 122 QPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR-MEEAMSMVNQMVEMGIKPDVVMY 180
Query: 133 TRLIVLYTKCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLR 188
T +I K + A +FD+M +VV +T++++ G A +L M +
Sbjct: 181 TTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTK 240
Query: 189 SGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE 240
+P+ TF + ++++ +I+ + +++ +SL++ + +G + E
Sbjct: 241 RKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDE 300
Query: 241 ARGIF------ECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASV 294
AR +F C P DVV+ T++I+G+ + ++A+ +F ++ +G+ N +TY ++
Sbjct: 301 ARQMFYLMETKGCFP--DVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTL 358
Query: 295 LTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER-- 352
+ + + ++V +H++ VP + N L+ G + + IF+ MQ+R
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 353 -----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLED 407
+ ++N +L G +G+ + L +F MR+ E+ +T ++ G G
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKR-EMDIGIITYTIIIQGMCKAGKVK 477
Query: 408 RGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
+++F + S GV+P Y ++ L R G EA +KM
Sbjct: 478 NAVNLFCSLPSK--GVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/393 (19%), Positives = 180/393 (45%), Gaps = 27/393 (6%)
Query: 94 FKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFD 153
F Y +L + E + HM+++R LPS+ T+L+ + K ++ D
Sbjct: 37 FCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCD 96
Query: 154 EMP----ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS--MLGR 207
+ ++ + +++ + Q A + +M++ G EP+ TF ++ + LG
Sbjct: 97 HLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGN 156
Query: 208 QIH------SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCT 257
++ + +++ V + ++++D K+G ++ A +F+ + DVV T
Sbjct: 157 RMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 258 AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRS 317
++++G G +A L R + ++ + +T+ +++ A ++++N ++R
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 318 EVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREV 373
+ + SLI+ + G + +R++F M+ + V+++ +++ G+ K + +
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDA 336
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCV 433
+++F M ++ + + +T ++ G G + ++F M S GV P Y +
Sbjct: 337 MKIFYEMSQKG-LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR--GVPPNIRTYNVL 393
Query: 434 VDLLGRAGRVEEA---FEFIKKMPFEPTAA-IW 462
+ L G+V++A FE ++K + A IW
Sbjct: 394 LHCLCYNGKVKKALMIFEDMQKREMDGVAPNIW 426
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 54/242 (22%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +L+N + + E +++ M P V T LI + KC + DA +F EM
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---GRQI 209
++ N +++T +I + Q G + A +F M+ G PN T+ + L G+
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 210 HSLII-----KSNYDA---HVYVGSSLL-----------------DM------------- 231
+L+I K D +++ + LL DM
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYT 464
Query: 232 -----YAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGE 282
K GK+ A +F LP + +VV+ T +ISG + GL EA LFR+++ +
Sbjct: 465 IIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Query: 283 GM 284
G+
Sbjct: 525 GV 526
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 157/347 (45%), Gaps = 23/347 (6%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNL 182
P V + +I ++ DA ++F EM + NVV++ ++I G S A L
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 183 FVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAK 234
M+ PN TF+ + +++ +IK + D ++ SSL++ +
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 235 DGKIHEARGIFECLPERD----VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVT 290
++ EA+ +FE + +D VV+ +I G+ + +E ++LFR++ G+ N VT
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT 433
Query: 291 YASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ 350
Y +++ D+ + V ++ V ++ + L+D G + + +F+ +Q
Sbjct: 434 YTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 351 ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLE 406
E + ++N M+ G K G+ + +LF + + VKP+ VT ++SG GL+
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLK 552
Query: 407 DRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
+ +F +M G P Y ++ R G + E I++M
Sbjct: 553 EEADALFREMKEE--GPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 158/367 (43%), Gaps = 56/367 (15%)
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ-------- 208
E ++V+ ++++ + S A++L QM+ G +P+ FTF T+ L R
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 209 -IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP----ERDVVSCTAIISGY 263
+ +++K V G +++ K G I A + + + E VV II
Sbjct: 208 LVDRMVVKGCQPDLVTYGI-VVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDAL 266
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
+AL+LF ++ +G++ N VTY S++ L ++ + ++ ++ V
Sbjct: 267 CNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNV 326
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVLELFTL 379
V ++LID + K G L + +++D M +R+ + ++++++ G+ H E +F L
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 380 MREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI------------------ 421
M + + P+ VT ++ G D G+++F +M+ +
Sbjct: 387 MISK-DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 445
Query: 422 ---------------GVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPTAAIWG 463
GV P Y ++D L G+VE A FE++++ EP +
Sbjct: 446 ECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYN 505
Query: 464 SLL-GAC 469
++ G C
Sbjct: 506 IMIEGMC 512
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 185/446 (41%), Gaps = 63/446 (14%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L +M G++ N+LLN + + + M++ Y P F LI +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 142 CDSLRDARHVFDEMP---------------------------------------ERNVVS 162
+ +A + D M E VV
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 163 WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---GR-----QIHSLII 214
+ +I A + ALNLF +M G PN T+ ++ L GR ++ S +I
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 215 KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGLDE 270
+ + +V S+L+D + K+GK+ EA +++ + +R D+ + +++I+G+ +
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 378
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
EA +F + + N VTY +++ +D G ++ + + + V +LI
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 331 DMYSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
+ + ++ +F M V M+++ +L G +G+ L +F + + +++
Sbjct: 439 HGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL-QRSKM 497
Query: 387 KPDGVTMLAVLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
+PD T ++ G C G +ED G D+F ++ GV+P Y ++ R G EE
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVED-GWDLFCSLSLK--GVKPNVVTYTTMMSGFCRKGLKEE 554
Query: 446 AFEFIKKMPFE---PTAAIWGSLLGA 468
A ++M E P + + +L+ A
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/363 (20%), Positives = 159/363 (43%), Gaps = 43/363 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN+L+ + + R+ + MI+ + P+V + LI + K L +A ++DEM
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
+R ++ +++++I+ + +A ++F M+ PN T+ T
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT------------ 401
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGL 268
L+ + K ++ E +F + +R + V+ T +I G+ Q
Sbjct: 402 ---------------LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+ A +F+Q+ +G+ + +TY+ +L L ++ V ++ RS++ + N
Sbjct: 447 CDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNI 506
Query: 329 LIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
+I+ K G + +F ++ + V+++ M+ G+ + G E LF M+EE
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
+ PD T ++ G + ++ +M S + + G V ++L GR++
Sbjct: 567 PL-PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDAST--IGLVTNML-HDGRLD 622
Query: 445 EAF 447
++F
Sbjct: 623 KSF 625
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 14/244 (5%)
Query: 234 KDGKIHEARGIF----ECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYV 289
D K+ +A +F + P +V + ++S A++ + + L Q++ G+ N
Sbjct: 58 NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLY 117
Query: 290 TYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM 349
TY+ ++ + L V +++ +V NSL++ + ++ + + M
Sbjct: 118 TYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Query: 350 QER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
E ++N ++ G +H E + L M + +PD VT V++G G
Sbjct: 178 VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG-CQPDLVTYGIVVNGLCKRGD 236
Query: 406 EDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIW 462
D L + M GKI EP Y ++D L V +A +M P +
Sbjct: 237 IDLALSLLKKMEQGKI--EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 463 GSLL 466
SL+
Sbjct: 295 NSLI 298
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 155/336 (46%), Gaps = 22/336 (6%)
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR--------QIH 210
+V+S++ +++ Y + G + L M R G +PN + + ++ +L R +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERD----VVSCTAIISGYAQL 266
S +I+ V ++L+D + K G I A F + RD V++ TAIISG+ Q+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G EA LF ++ +G++ + VT+ ++ + +VHNH++++ VV
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
+LID K G+L + + M + + ++N+++ G K G E ++L E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-E 518
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR 442
+ D VT ++ G D+ +I +M GK G++P + +++ G
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-GK-GLQPTIVTFNVLMNGFCLHGM 576
Query: 443 VEEAFEFIKKM---PFEPTAAIWGSLLGACSVHSNV 475
+E+ + + M P A + SL+ + +N+
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 157/359 (43%), Gaps = 48/359 (13%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER----NVVSWTA 165
L E + + MI+ LP + T LI + K +R A F EM R +V+++TA
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 166 MISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVG 225
+IS + Q G +A LF +M G EP+ TF
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF--------------------------- 424
Query: 226 SSLLDMYAKDGKIHEARGIFE------CLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
+ L++ Y K G + +A + C P +VV+ T +I G + G + A +L ++
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSP--NVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 280 RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNL 339
G+Q N TY S++ L +++ ++ + + + V +L+D Y K G +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 340 TYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLA 395
++ I M + T++++N ++ G+ HG + +L M + + P+ T +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNATTFNS 601
Query: 396 VLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
++ C L+ I+ DM S GV P + Y +V +A ++EA+ ++M
Sbjct: 602 LVKQYCIRNNLK-AATAIYKDMCSR--GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 135/306 (44%), Gaps = 22/306 (7%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM- 155
Y L++ + +R + M P V T +I + + + +A +F EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 156 ---PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ---- 208
E + V++T +I+ Y + G+ A + M+++G PN T+ T+ L ++
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 209 -----IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEAR---GIFECLP-ERDVVSCTAI 259
+H + K +++ +S+++ K G I EA G FE D V+ T +
Sbjct: 474 SANELLHEMW-KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
+ Y + G ++A ++ +++ G+G+Q VT+ ++ L+ G+++ N +L +
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGKHGEGREVLE 375
NSL+ Y NL + I+ M R V ++ ++ G+ K +E
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 376 LFTLMR 381
LF M+
Sbjct: 653 LFQEMK 658
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 65/380 (17%)
Query: 152 FDEMPERNVVS-----WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG 206
F E P+ NV + ++ Y G + ++F Q+L E +
Sbjct: 145 FWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLRE-----ARRVFE 199
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE----RDVVSCTAIISG 262
+ ++ ++ S +VY+ D Y K A +F PE +V S +I
Sbjct: 200 KMLNYGLVLSVDSCNVYLTRLSKDCY----KTATAIIVFREFPEVGVCWNVASYNIVIHF 255
Query: 263 YAQLGLDEEA--LDLFRQLRG---------------------------------EGMQSN 287
QLG +EA L L +L+G +G++ N
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 288 YVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
Y S++ L + L ++ + ++R + V+ +LID + K G++ + + F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 348 TMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG-CSH 402
M R V+++ A++ G+ + G+ E +LF M + ++PD VT +++G C
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKA 434
Query: 403 GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM---PFEPTA 459
G ++D + M G P Y ++D L + G ++ A E + +M +P
Sbjct: 435 GHMKD-AFRVHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 460 AIWGSLLGACSVHSNVDIGV 479
+ S++ N++ V
Sbjct: 492 FTYNSIVNGLCKSGNIEEAV 511
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 155/336 (46%), Gaps = 22/336 (6%)
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR--------QIH 210
+V+S++ +++ Y + G + L M R G +PN + + ++ +L R +
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERD----VVSCTAIISGYAQL 266
S +I+ V ++L+D + K G I A F + RD V++ TAIISG+ Q+
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G EA LF ++ +G++ + VT+ ++ + +VHNH++++ VV
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 459
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
+LID K G+L + + M + + ++N+++ G K G E ++L E
Sbjct: 460 TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-E 518
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR 442
+ D VT ++ G D+ +I +M GK G++P + +++ G
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEML-GK-GLQPTIVTFNVLMNGFCLHGM 576
Query: 443 VEEAFEFIKKM---PFEPTAAIWGSLLGACSVHSNV 475
+E+ + + M P A + SL+ + +N+
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNL 612
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 157/359 (43%), Gaps = 48/359 (13%)
Query: 110 LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER----NVVSWTA 165
L E + + MI+ LP + T LI + K +R A F EM R +V+++TA
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 166 MISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVG 225
+IS + Q G +A LF +M G EP+ TF
Sbjct: 392 IISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF--------------------------- 424
Query: 226 SSLLDMYAKDGKIHEARGIFE------CLPERDVVSCTAIISGYAQLGLDEEALDLFRQL 279
+ L++ Y K G + +A + C P +VV+ T +I G + G + A +L ++
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSP--NVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 280 RGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNL 339
G+Q N TY S++ L +++ ++ + + + V +L+D Y K G +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEM 542
Query: 340 TYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLA 395
++ I M + T++++N ++ G+ HG + +L M + + P+ T +
Sbjct: 543 DKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG-IAPNATTFNS 601
Query: 396 VLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
++ C L+ I+ DM S GV P + Y +V +A ++EA+ ++M
Sbjct: 602 LVKQYCIRNNLK-AATAIYKDMCSR--GVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 135/306 (44%), Gaps = 22/306 (7%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM- 155
Y L++ + +R + M P V T +I + + + +A +F EM
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 156 ---PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ---- 208
E + V++T +I+ Y + G+ A + M+++G PN T+ T+ L ++
Sbjct: 414 CKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLD 473
Query: 209 -----IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEAR---GIFECLP-ERDVVSCTAI 259
+H + K +++ +S+++ K G I EA G FE D V+ T +
Sbjct: 474 SANELLHEMW-KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
+ Y + G ++A ++ +++ G+G+Q VT+ ++ L+ G+++ N +L +
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGKHGEGREVLE 375
NSL+ Y NL + I+ M R V ++ ++ G+ K +E
Sbjct: 593 APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWF 652
Query: 376 LFTLMR 381
LF M+
Sbjct: 653 LFQEMK 658
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 151/380 (39%), Gaps = 65/380 (17%)
Query: 152 FDEMPERNVVS-----WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG 206
F E P+ NV + ++ Y G + ++F Q+L E +
Sbjct: 145 FWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLRE-----ARRVFE 199
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE----RDVVSCTAIISG 262
+ ++ ++ S +VY+ D Y K A +F PE +V S +I
Sbjct: 200 KMLNYGLVLSVDSCNVYLTRLSKDCY----KTATAIIVFREFPEVGVCWNVASYNIVIHF 255
Query: 263 YAQLGLDEEA--LDLFRQLRG---------------------------------EGMQSN 287
QLG +EA L L +L+G +G++ N
Sbjct: 256 VCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPN 315
Query: 288 YVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFD 347
Y S++ L + L ++ + ++R + V+ +LID + K G++ + + F
Sbjct: 316 SYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFY 375
Query: 348 TMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG-CSH 402
M R V+++ A++ G+ + G+ E +LF M + ++PD VT +++G C
Sbjct: 376 EMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTELINGYCKA 434
Query: 403 GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM---PFEPTA 459
G ++D + M G P Y ++D L + G ++ A E + +M +P
Sbjct: 435 GHMKD-AFRVHNHMIQA--GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 460 AIWGSLLGACSVHSNVDIGV 479
+ S++ N++ V
Sbjct: 492 FTYNSIVNGLCKSGNIEEAV 511
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/364 (21%), Positives = 163/364 (44%), Gaps = 27/364 (7%)
Query: 129 VFLRTRLIVLYTKCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFV 184
V+ T LI + R+A +VF +M E ++++ +++ + + G + V
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 185 QMLRS-GTEPNEFTFATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYAKD 235
+ ++S G P+ +T+ T+ + R Q+ + + + ++LLD+Y K
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 236 GKIHEARGIFECLP----ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTY 291
+ EA + + +V+ ++IS YA+ G+ +EA++L Q+ +G + + TY
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 292 ASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ- 350
++L+ ++ + + + + N+ I MY G T +IFD +
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 351 ---ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLED 407
+++WN +L +G++G EV +F M+ V P+ T ++S S G +
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFE 506
Query: 408 RGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIWGS 464
+ + ++ M GV P Y V+ L R G E++ + + +M +P + S
Sbjct: 507 QAMTVYRRMLDA--GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 465 LLGA 468
LL A
Sbjct: 565 LLHA 568
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 172/404 (42%), Gaps = 49/404 (12%)
Query: 80 QPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLY 139
Q +M G YNALL+ +E +V M+ + PS+ LI Y
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY 359
Query: 140 TKCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNE 195
+ L +A + ++M E+ +V ++T ++S + + G A+++F +M +G +PN
Sbjct: 360 ARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNI 419
Query: 196 FTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE----CLPER 251
TF ++ + MY GK E IF+ C
Sbjct: 420 CTF---------------------------NAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVH 311
D+V+ +++ + Q G+D E +F++++ G T+ ++++A S S + V+
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVY 512
Query: 312 NHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE----RTVMSWNAMLVGYGKH 367
+L + V + N+++ ++ G S ++ M++ +++ ++L Y
Sbjct: 513 RRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN- 571
Query: 368 GEGREVLELFTLMRE--ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEP 425
G+E+ + +L E ++P V + ++ CS L F ++ + G P
Sbjct: 572 --GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK--ERGFSP 627
Query: 426 KKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPTAAIWGSLL 466
+V + GR V +A +++K+ F P+ A + SL+
Sbjct: 628 DITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 163/377 (43%), Gaps = 62/377 (16%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSG 190
+I + K + A ++F+ + E +V S+T++ISA++ G +A+N+F +M G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 191 TEPNEFTFATVXSMLGR------QIHSLIIKSNYDA---HVYVGSSLLDMYAKDGKIH-E 240
+P T+ + ++ G+ +I SL+ K D Y ++L+ K G +H E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC-CKRGSLHQE 297
Query: 241 ARGIFECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
A +FE + D V+ A++ Y + +EA+ + ++ G + VTY S+++
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 297 ALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ----ER 352
A + LD ++ N + V +L+ + + G + + IF+ M+ +
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 353 TVMSWNAMLVGYGKHGEGREVLELFTLMREEN--EVKPDGVTMLAVLSGCSHGGLEDRGL 410
+ ++NA + YG G+ E++++F E N + PD VT +L+ G++
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFD---EINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 411 DIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACS 470
+F +M K+ F P + +L+ A S
Sbjct: 475 GVFKEM----------------------------------KRAGFVPERETFNTLISAYS 500
Query: 471 VHSNVDIGVFVGHRLLE 487
+ + + V R+L+
Sbjct: 501 RCGSFEQAMTVYRRMLD 517
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 146/349 (41%), Gaps = 27/349 (7%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEM------PERNVVSWTAMISAYSQRGYASQAL 180
P + L+ ++ + + VF EM PER ++ +ISAYS+ G QA+
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQAM 509
Query: 181 NLFVQMLRSGTEPNEFTFATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMY 232
++ +ML +G P+ T+ TV + L R ++ + + + SLL Y
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 233 AKD---GKIHE-ARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNY 288
A G +H A ++ + E V ++ ++ L EA F +L+ G +
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 289 VTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDT 348
T S+++ + V +++ + NSL+ M+S+ + S I
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 349 MQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGG 404
+ + ++S+N ++ Y ++ R+ +F+ MR V PD +T + +
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV-PDVITYNTFIGSYAADS 748
Query: 405 LEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
+ + + + M K G P + Y +VD + R +EA F++ +
Sbjct: 749 MFEEAIGVVRYMI--KHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 113 GQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER----NVVSWTAMIS 168
+ V++ +I+ R +V L+T L+++ +KCD L +A F E+ ER ++ + +M+S
Sbjct: 582 AEEVYSGVIEPR---AVLLKT-LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 169 AYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR--------QIHSLIIKSNYDA 220
Y +R ++A + M G P+ T+ ++ M R +I I+
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKP 697
Query: 221 HVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGLDEEALDLF 276
+ ++++ Y ++ ++ +A IF + DV++ I YA + EEA+ +
Sbjct: 698 DIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVV 757
Query: 277 RQLRGEGMQSNYVTYASVLTALSGLASLDHGK 308
R + G + N TY S++ L D K
Sbjct: 758 RYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 150/351 (42%), Gaps = 36/351 (10%)
Query: 131 LRTRLIVLYTKCDSLRDARHV------FDEMPER----NVVSWTAMISAYSQRGYASQAL 180
++ +++ T DSL RHV F EM + NVV++ ++I+ G S A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 181 NLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMY 232
L ML PN TF + ++H +I+ + D + L++ +
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
Query: 233 AKDGKIHEARGIF------ECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS 286
++ EA+ +F +CLP ++ + +I+G+ + E+ ++LFR++ G+
Sbjct: 374 CMHNRLDEAKQMFKFMVSKDCLP--NIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG 431
Query: 287 NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
N VTY +++ D + V ++ + VP+ ++ + L+ G L + IF
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIF 491
Query: 347 DTMQ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH 402
+Q E + +N M+ G K G+ E +LF + +KPD VT ++SG
Sbjct: 492 KYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCS 547
Query: 403 GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
L D+F M G P Y ++ R + E IK+M
Sbjct: 548 KRLLQEADDLFRKMKED--GTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 183/401 (45%), Gaps = 42/401 (10%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRA-LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKC 142
QM G Y+ +N C +R+ L V A M+K Y P + + L+ Y
Sbjct: 108 QMQTLGISHDLYTYSIFIN-CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS 166
Query: 143 DSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF 198
+ DA + D+M E + ++T +I AS+A+ L QM++ G +P+ T+
Sbjct: 167 KRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
Query: 199 ATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTA 258
TV + L ++ + + +LL+ K+ AR + +VV
Sbjct: 227 GTVVNGLCKR-----------GDIDLALNLLN------KMEAAR------IKANVVIFNT 263
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
II + E A+DLF ++ +G++ N VTY S++ L ++ +++L +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGKHGEGREVL 374
+ VV N+LID + K G L + ++ + M +R++ +++N ++ G+ H E
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 375 ELFTLMREENEVKPDGVTMLAVLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCV 433
++F M + + P+ T +++G C +ED G+++F +M+ + G+ Y +
Sbjct: 384 QMFKFMVSK-DCLPNIQTYNTLINGFCKCKRVED-GVELFREMS--QRGLVGNTVTYTTI 439
Query: 434 VDLLGRAGRVEEAFEFIKKMPFE--PTAAIWGSLL--GACS 470
+ +AG + A K+M PT + S+L G CS
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS 480
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 184/415 (44%), Gaps = 34/415 (8%)
Query: 82 LLQMALCGHDMKFKGYNALLNE-CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLI---V 137
L +M G++ ++LLN C SKR + + + M++ Y P F T LI
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKR-ISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 138 LYTKCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEP 193
L+ K +A + D+M +R ++V++ +++ +RG ALNL +M + +
Sbjct: 200 LHNKAS---EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKA 256
Query: 194 NEFTFATVXSMLGRQIHSLIIKSNYD--------AHVYVGSSLLDMYAKDGKIHEARGIF 245
N F T+ L + H + + +V +SL++ G+ +A +
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 246 ECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL 301
+ E+ +VV+ A+I + + G EA L ++ + + +TY ++
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 302 ASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSW 357
LD KQ+ ++ + + N+LI+ + KC + +F M +R +++
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG-CSHGGLEDRGLDIFYDM 416
++ G+ + G+ +F M N V D +T +L G CS+G L D L IF +
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQM-VSNRVPTDIMTYSILLHGLCSYGKL-DTALVIFKYL 494
Query: 417 TSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLL-GACS 470
++ E Y +++ + +AG+V EA++ + +P + +++ G CS
Sbjct: 495 QKSEM--ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCS 547
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 175/409 (42%), Gaps = 37/409 (9%)
Query: 90 HDMKFKG-------YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKC 142
+MKF+G YN++++ L + M P V LI + K
Sbjct: 286 EEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKF 345
Query: 143 DSLRDARHVFDEMP----ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF 198
L + EM + NVVS++ ++ A+ + G QA+ +V M R G PNE+T+
Sbjct: 346 GKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTY 405
Query: 199 ATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE 250
++ + ++ + +++ + +V ++L+D ++ EA +F +
Sbjct: 406 TSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 251 RDVV----SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH 306
V+ S A+I G+ + + AL+L +L+G G++ + + Y + + L L ++
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEA 525
Query: 307 GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLV 362
K V N + + + ++ +L+D Y K GN T + D M+E TV+++ ++
Sbjct: 526 AKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLID 585
Query: 363 GYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIG 422
G K+ + ++ F + + ++ + A++ G + +F M G
Sbjct: 586 GLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK--G 643
Query: 423 VEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP--------FEPTAAIWG 463
+ P + Y ++D + G V EA KM T+ +WG
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 9/204 (4%)
Query: 255 SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV 314
SC ++ +A+LG ++ F+ + G G + TY ++ + ++ + + +
Sbjct: 229 SCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEM 288
Query: 315 -LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ----ERTVMSWNAMLVGYGKHGE 369
R VP V NS+ID + K G L + F+ M+ E V+++NA++ + K G+
Sbjct: 289 KFRGLVPD-TVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEH 429
LE + M+ N +KP+ V+ ++ G+ + + + DM ++G+ P +
Sbjct: 348 LPIGLEFYREMK-GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR--RVGLVPNEYT 404
Query: 430 YGCVVDLLGRAGRVEEAFEFIKKM 453
Y ++D + G + +AF +M
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEM 428
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 146/374 (39%), Gaps = 80/374 (21%)
Query: 145 LRDARHVFDEMPERNVV----SWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFAT 200
L +A F +M V S ++ +++ G F M+ +G P FT+
Sbjct: 208 LEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTY-- 265
Query: 201 VXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE-------------- 246
+ ++D K+G + ARG+FE
Sbjct: 266 -------------------------NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 247 -----------------CLPER--------DVVSCTAIISGYAQLGLDEEALDLFRQLRG 281
C E DV++ A+I+ + + G L+ +R+++G
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 282 EGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
G++ N V+Y++++ A + + + + R + SLID K GNL+
Sbjct: 361 NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSD 420
Query: 342 SRRIFDTMQ----ERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
+ R+ + M E V+++ A++ G +E ELF M + V P+ + A++
Sbjct: 421 AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALI 479
Query: 398 SGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP--- 454
G DR L++ ++ G+ G++P YG + L ++E A + +M
Sbjct: 480 HGFVKAKNMDRALELLNEL-KGR-GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECG 537
Query: 455 FEPTAAIWGSLLGA 468
+ + I+ +L+ A
Sbjct: 538 IKANSLIYTTLMDA 551
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 184/429 (42%), Gaps = 74/429 (17%)
Query: 97 YNALLNECVSKRA-LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
YN L+N C +R+ + + M+K Y PS+ + L+ Y + DA + D+M
Sbjct: 123 YNILIN-CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 156 PER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHS 211
E + +++T +I AS+A+ L +M++ G +PN T+ V ++
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV-------VNG 234
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
L + + D + +LL+ K+ A+ E DVV II + ++
Sbjct: 235 LCKRGDTD----LALNLLN------KMEAAK------IEADVVIFNTIIDSLCKYRHVDD 278
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL+LF+++ +G++ N VTY+S+++ L Q+ + ++ ++ +V N+LID
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 332 MYSKCGNLTYSRRIFDTMQERT-------------------------------------- 353
+ K G + +++D M +R+
Sbjct: 339 AFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFP 398
Query: 354 -VMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
V+++N ++ G+ K + ELF M V D VT ++ G H G D +
Sbjct: 399 DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG-DTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 413 FYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPTAAIWGSLLGAC 469
F M S GV P Y ++D L G++E+A F++++K + I+ +++
Sbjct: 458 FKQMVSD--GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM 515
Query: 470 SVHSNVDIG 478
VD G
Sbjct: 516 CKAGKVDDG 524
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 154/365 (42%), Gaps = 63/365 (17%)
Query: 131 LRTRLIVLYTKCDSLRDARHV------FDEMPER----NVVSWTAMISAYSQRGYASQAL 180
+ +++ T DSL RHV F EM + NVV+++++IS G S A
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 181 NLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMY 232
L M+ PN TF + +++ +IK + D ++ +SL++ +
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 233 AKDGKIHEARGIFE------CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS 286
++ +A+ +FE C P DVV+ +I G+ + E+ +LFR++ G+
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFP--DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 287 NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
+ VTY +++ L D+ ++V ++ VP ++ + L+D G L + +F
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 347 DTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLE 406
D MQ ++E+K D ++ G G
Sbjct: 494 DYMQ--------------------------------KSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 407 DRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE---PTAAIWG 463
D G D+F ++ GV+P Y ++ L ++EA+ +KKM + P + +
Sbjct: 522 DDGWDLFCSLSLK--GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYN 579
Query: 464 SLLGA 468
+L+ A
Sbjct: 580 TLIRA 584
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 185/428 (43%), Gaps = 72/428 (16%)
Query: 97 YNALLNECVSKRA-LREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
YN L+N C +R+ + + M+K Y PS+ + L+ Y + DA + D+M
Sbjct: 48 YNILIN-CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106
Query: 156 PER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHS 211
E + +++T +I AS+A+ L +M++ G +PN T+ V + L ++
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR--- 163
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
+ + +LL+ K+ A+ E DVV II + ++
Sbjct: 164 --------GDIDLAFNLLN------KMEAAK------IEADVVIFNTIIDSLCKYRHVDD 203
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
AL+LF+++ +G++ N VTY+S+++ L Q+ + ++ ++ +V N+LID
Sbjct: 204 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 263
Query: 332 MYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVLELFTLM------- 380
+ K G + ++ D M +R+ + ++N+++ G+ H + ++F M
Sbjct: 264 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFP 323
Query: 381 ----------------REENEVK-----------PDGVTMLAVLSGCSHGGLEDRGLDIF 413
R E+ + D VT ++ G H G D +F
Sbjct: 324 DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 414 YDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPTAAIWGSLLGACS 470
M S GV P Y ++D L G++E+A F++++K + I+ +++
Sbjct: 384 KQMVSD--GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 471 VHSNVDIG 478
VD G
Sbjct: 442 KAGKVDDG 449
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 153/365 (41%), Gaps = 63/365 (17%)
Query: 131 LRTRLIVLYTKCDSLRDARHV------FDEMPER----NVVSWTAMISAYSQRGYASQAL 180
+ +++ T DSL RHV F EM + NVV+++++IS G S A
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 181 NLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMY 232
L M+ PN TF + ++H +IK + D ++ +SL++ +
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 233 AKDGKIHEARGIFE------CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS 286
++ +A+ +FE C P+ D + +I G+ + E+ +LFR++ G+
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYN--TLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 287 NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
+ VTY +++ L D+ ++V ++ VP ++ + L+D G L + +F
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 347 DTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLE 406
D MQ ++E+K D ++ G G
Sbjct: 419 DYMQ--------------------------------KSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 407 DRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE---PTAAIWG 463
D G D+F ++ GV+P Y ++ L ++EA+ +KKM + P + +
Sbjct: 447 DDGWDLFCSLSLK--GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Query: 464 SLLGA 468
+L+ A
Sbjct: 505 TLIRA 509
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 96/217 (44%), Gaps = 16/217 (7%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN+L+N L + +++ M+ P + LI + K + D +F EM
Sbjct: 293 YNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMS 352
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML------- 205
R + V++T +I G A +F QM+ G P+ T++ + L
Sbjct: 353 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 412
Query: 206 -GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAII 260
++ + KS +Y+ +++++ K GK+ + +F L + +VV+ +I
Sbjct: 413 KALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI 472
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA 297
SG L +EA L ++++ +G + TY +++ A
Sbjct: 473 SGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRA 509
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 167/377 (44%), Gaps = 23/377 (6%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN +L L++ V M++ P V T LI + + A + DEM
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMR 266
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT--------FATVXSM 204
+R +VV++ +++ + G +A+ M SG +PN T +T M
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326
Query: 205 LGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAII 260
++ + +++ + V + L++ + G + A I E +P+ + +S ++
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLL 386
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVP 320
G+ + + A++ ++ G + VTY ++LTAL ++ ++ N +
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 321 SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGKHGEGREVLEL 376
++ N++ID +K G + ++ D M+ + + +++++++ G + G+ E ++
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 377 FTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL 436
F E ++P+ VT +++ G DR +D M + G +P + Y +++
Sbjct: 507 FHEF-ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR--GCKPNETSYTILIEG 563
Query: 437 LGRAGRVEEAFEFIKKM 453
L G +EA E + ++
Sbjct: 564 LAYEGMAKEALELLNEL 580
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 45/259 (17%)
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRGEG----------MQSNY------------- 288
D++ CT +I G+ +LG +A + L G G M S Y
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 289 ---------VTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNL 339
VTY ++L +L L +V + +L+ + V+ LI+ + +
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 340 TYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLA 395
++ ++ D M++R V+++N ++ G K G E ++ M + +P+ +T
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM-PSSGCQPNVITHNI 314
Query: 396 VL-SGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP 454
+L S CS G D + DM + G P + +++ L R G + A + ++KMP
Sbjct: 315 ILRSMCSTGRWMD-AEKLLADML--RKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 455 ---FEPTAAIWGSLL-GAC 469
+P + + LL G C
Sbjct: 372 QHGCQPNSLSYNPLLHGFC 390
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 150/336 (44%), Gaps = 24/336 (7%)
Query: 139 YTKCDSLRDARHVFDEMPERN-----VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEP 193
+ K + DA + EM ++ ++ +++ + G+ A+ + ML+ G +P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 194 NEFTFATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIF 245
+ +T+ +V S L + ++ +I + + ++L+ K+ ++ EA +
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 246 ECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL 301
L + DV + ++I G A++LF ++R +G + + TY ++ +L
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSK 448
Query: 302 ASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ----ERTVMSW 357
LD + + S V+ N+LID + K + IFD M+ R +++
Sbjct: 449 GKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTY 508
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMT 417
N ++ G K + +L M E + KPD T ++L+ GG + DI MT
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 418 SGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
S G EP YG ++ L +AGRVE A + ++ +
Sbjct: 568 SN--GCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 143/336 (42%), Gaps = 20/336 (5%)
Query: 89 GHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDA 148
G+D YN++++ ++E V MI P+ LI K + + +A
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 149 RHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSM 204
+ + + +V ++ ++I A+ LF +M G EP+EFT+ +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 205 L---GRQIHSL-IIK----SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP----ERD 252
L G+ +L ++K S V ++L+D + K K EA IF+ + R+
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504
Query: 253 VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN 312
V+ +I G + E+A L Q+ EG + + TY S+LT + +
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHG 368
+ + +V +LI K G + + ++ ++Q + T ++N ++ G +
Sbjct: 565 AMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Query: 369 EGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGG 404
+ E + LF M E+NE PD V+ V G +GG
Sbjct: 625 KTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 149/331 (45%), Gaps = 29/331 (8%)
Query: 99 ALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER 158
+L+N + + + + M++ Y P + +I K + DA F E+ +
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219
Query: 159 ----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------G 206
NVV++TA+++ S A L M++ PN T++ +
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279
Query: 207 RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISG 262
+++ +++ + D + SSL++ +I EA +F+ + + DVVS +I+G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339
Query: 263 YAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV----LRSE 318
+ + E+ + LFR++ G+ SN VTY +++ +D ++ + + + +
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVL 374
+ +Y +L L D G L + IF+ MQ+R ++++ ++ G K G+ E
Sbjct: 400 IWTYNILLGGLCDN----GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 375 ELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
LF + + +KPD VT ++SG GL
Sbjct: 456 SLFCSLSLKG-LKPDIVTYTTMMSGLCTKGL 485
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 177/385 (45%), Gaps = 44/385 (11%)
Query: 101 LNECVSKRALREGQ-----RVHAHMIKTRYLPSVFLRTRL---IVLYTKCDSLRDARHVF 152
L E +SK LR+ + + + M+K+R PS+ RL IV K D +
Sbjct: 52 LRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 111
Query: 153 DEMPERN-VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHS 211
+ + RN + ++ +I+ + S AL++ +ML+ G EP+ T ++ + R+
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRR--- 168
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEE 271
V SL+D + G + D+V+ AII + +
Sbjct: 169 --------NRVSDAVSLVDKMVEIGY------------KPDIVAYNAIIDSLCKTKRVND 208
Query: 272 ALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLID 331
A D F+++ +G++ N VTY +++ L + ++ + +++ ++ V+ ++L+D
Sbjct: 209 AFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLD 268
Query: 332 MYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVLELFTLMREENEVK 387
+ K G + ++ +F+ M + ++++++++ G H E ++F LM + +
Sbjct: 269 AFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL- 327
Query: 388 PDGVTMLAVLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
D V+ +++G C +ED G+ +F +M+ + G+ Y ++ +AG V++A
Sbjct: 328 ADVVSYNTLINGFCKAKRVED-GMKLFREMS--QRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 447 FEFIKKMPF---EPTAAIWGSLLGA 468
EF +M F P + LLG
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGG 409
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 16/220 (7%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y++L+N + E ++ M+ L V LI + K + D +F EM
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---GRQI 209
+R N V++ +I + Q G +A F QM G P+ +T+ + L G
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELE 417
Query: 210 HSLII-----KSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAII 260
+L+I K D + ++++ K GK+ EA +F L + D+V+ T ++
Sbjct: 418 KALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMM 477
Query: 261 SGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSG 300
SG GL E L+ +++ EG+ N T + LS
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSA 517
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 164/373 (43%), Gaps = 29/373 (7%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN L+N VS + +RV M R P + +I Y K + A +M
Sbjct: 225 YNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDME 284
Query: 157 ER----NVVSWTAMISA-YSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML------ 205
R + +++ MI A Y+ + S + L+ +M G + F+ V L
Sbjct: 285 TRGHEADKITYMTMIQACYADSDFGS-CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKL 343
Query: 206 --GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEA-----RGIFECLPERDVVSCTA 258
G + +I+ +V + + L+D YAK G + +A R I E + DVV+ +
Sbjct: 344 NEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF-KPDVVTYSV 402
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
+++G + G EEALD F R +G+ N + Y+S++ L +D +++ +
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE-----RTVMSWNAMLVGYGKHGEGREV 373
N+LID ++K + + +F M+E +TV ++ +L G K E
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 374 LELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCV 433
L+L+ +M ++ + P A+ +G G R I ++ + ++ E +
Sbjct: 523 LKLWDMMIDKG-ITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED---M 578
Query: 434 VDLLGRAGRVEEA 446
++ L +AGR++EA
Sbjct: 579 INTLCKAGRIKEA 591
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 162/379 (42%), Gaps = 52/379 (13%)
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNY 218
V + A+I ++ + G + L ++ +M +G EP +T+ N+
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTY------------------NF 227
Query: 219 DAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQ 278
+ V + +D + ++ E+ I + D+V+ +I GY + G ++A++ R
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRI-----KPDIVTYNTMIKGYCKAGQTQKAMEKLRD 282
Query: 279 LRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE----VPSYVVLQNSLIDMYS 334
+ G +++ +TY +++ A A D G V + E VP + + +I
Sbjct: 283 METRGHEADKITYMTMIQAC--YADSDFGSCVALYQEMDEKGIQVPPHAF--SLVIGGLC 338
Query: 335 KCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDG 390
K G L +F+ M + V + ++ GY K G + + L M +E KPD
Sbjct: 339 KEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG-FKPDV 397
Query: 391 VTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA---F 447
VT V++G G + LD F+ T G+ Y ++D LG+AGRV+EA F
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFH--TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLF 455
Query: 448 EFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLEIETGNAGNYFFL-------- 499
E + + + + +L+ A + H VD + + R+ E E + Y +
Sbjct: 456 EEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFK 515
Query: 500 ---SXDVRSLRDMMLKKAV 515
+ + L DMM+ K +
Sbjct: 516 EHRNEEALKLWDMMIDKGI 534
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 171/394 (43%), Gaps = 44/394 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN LLN + E ++V+ M++ + P+++ +++ Y K ++ +A ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
E + ++T++I Y QR A +F +M G NE + + IH L
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHL-------IHGL 298
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEA 272
+ D +D++ K EC P V + T +I EA
Sbjct: 299 CVARRID-------EAMDLFVKMKDD-------ECFPT--VRTYTVLIKSLCGSERKSEA 342
Query: 273 LDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDM 332
L+L +++ G++ N TY ++ +L + +++ +L + V+ N+LI+
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 333 YSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
Y K G + + + + M+ R ++N ++ GY K + + L ++ E +V P
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKML--ERKVLP 460
Query: 389 DGVTMLAVLSG-CSHGGLED--RGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
D VT +++ G C G + R L + D G+ P + Y ++D L ++ RVEE
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-----GLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 446 A---FEFIKKMPFEPTAAIWGSLLGACSVHSNVD 476
A F+ +++ P ++ +L+ VD
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 160/376 (42%), Gaps = 37/376 (9%)
Query: 104 CVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLR--DARHVFDEMPER--- 158
CV++R + E + M P+V RT +++ + C S R +A ++ EM E
Sbjct: 299 CVARR-IDEAMDLFVKMKDDECFPTV--RTYTVLIKSLCGSERKSEALNLVKEMEETGIK 355
Query: 159 -NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ--------I 209
N+ ++T +I + + +A L QML G PN T+ + + ++ +
Sbjct: 356 PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDV 415
Query: 210 HSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQ 265
L+ + + L+ Y K +H+A G+ + ER DVV+ ++I G +
Sbjct: 416 VELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCR 474
Query: 266 LGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
G + A L + G+ + TY S++ +L ++ + + + + V VV+
Sbjct: 475 SGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVM 534
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGKHGEGREVLELFTLMR 381
+LID Y K G + + + + M + +++NA++ G G+ +E TL+
Sbjct: 535 YTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA----TLL- 589
Query: 382 EENEVK----PDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
EE VK P T ++ G D F M S G +P Y +
Sbjct: 590 EEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS--GTKPDAHTYTTFIQTY 647
Query: 438 GRAGRVEEAFEFIKKM 453
R GR+ +A + + KM
Sbjct: 648 CREGRLLDAEDMMAKM 663
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 90/436 (20%), Positives = 173/436 (39%), Gaps = 87/436 (19%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN+L++ R+ + M +P + T +I K + +A +FD +
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF-------------- 198
++ NVV +TA+I Y + G +A + +ML PN TF
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584
Query: 199 -ATVXS----MLGRQ---------IHSLIIKSNYD-----------------AHVYVGSS 227
AT+ +G Q IH L+ ++D AH Y ++
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY--TT 642
Query: 228 LLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEG 283
+ Y ++G++ +A + + E D+ + +++I GY LG A D+ +++R G
Sbjct: 643 FIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG 702
Query: 284 MQSNYVTYASV------------------LTALSGLASLDHGKQVHNHVLRSEVPSYVVL 325
+ + T+ S+ L A+S + D ++ ++ V
Sbjct: 703 CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKS 762
Query: 326 QNSLIDMYSKCGNLTYSRRIFDTMQERTVMS-----WNAML---VGYGKHGEGREVLELF 377
LI + GNL + ++FD MQ +S +NA+L KH E +V++
Sbjct: 763 YEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDM 822
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
+ +++ V ++ G G ++RG +F ++ + G + + ++D +
Sbjct: 823 ICVGHLPQLESCKV----LICGLYKKGEKERGTSVFQNLL--QCGYYEDELAWKIIIDGV 876
Query: 438 GRAGRVEEAFEFIKKM 453
G+ G VE +E M
Sbjct: 877 GKQGLVEAFYELFNVM 892
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 171/379 (45%), Gaps = 24/379 (6%)
Query: 96 GYNALLNECV-SKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
YNA+L+ + SKR + + V M++++ P+VF LI + ++ A +FD+
Sbjct: 171 SYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 155 MPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQ-- 208
M + NVV++ +I Y + L M G EPN ++ V + L R+
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 209 ------IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTA 258
+ + + + Y ++L+ Y K+G H+A + + V++ T+
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTS 350
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
+I + G A++ Q+R G+ N TY +++ S ++ +V + +
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVL 374
VV N+LI+ + G + + + + M+E+ V+S++ +L G+ + + E L
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 375 ELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVV 434
+ M E+ +KPD +T +++ G D++ +M ++G+ P + Y ++
Sbjct: 471 RVKREMVEKG-IKPDTITYSSLIQGFCEQRRTKEACDLYEEML--RVGLPPDEFTYTALI 527
Query: 435 DLLGRAGRVEEAFEFIKKM 453
+ G +E+A + +M
Sbjct: 528 NAYCMEGDLEKALQLHNEM 546
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 172/398 (43%), Gaps = 55/398 (13%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L +M G+ + YN L+ + + +HA M++ PSV T LI K
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 142 CDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT 197
++ A D+M R N ++T ++ +SQ+GY ++A + +M +G P+ T
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 198 FATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DV 253
+ ++L++ + GK+ +A + E + E+ DV
Sbjct: 418 Y---------------------------NALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 254 VSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNH 313
VS + ++SG+ + +EAL + R++ +G++ + +TY+S++ ++
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 314 VLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM----SWNAMLVGYGKHGE 369
+LR +P +LI+ Y G+L + ++ + M E+ V+ +++ ++ G K
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 370 GREVLELFTLMREENEVKPDGVTMLAVLSGCSH----------GGLEDRGL----DIFYD 415
RE L + E V P VT ++ CS+ G +G+ D ++
Sbjct: 571 TREAKRLLLKLFYEESV-PSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFE 629
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
GK +P Y ++ RAG + +A+ K+M
Sbjct: 630 SMLGK-NHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEM 666
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 106/238 (44%), Gaps = 12/238 (5%)
Query: 252 DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG-KQV 310
+V + +I G+ G + AL LF ++ +G N VTY +++ L +D G K +
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 311 HNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGK 366
+ L+ P+ ++ N +I+ + G + + M R +++N ++ GY K
Sbjct: 264 RSMALKGLEPN-LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK 322
Query: 367 HGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPK 426
G + L + M + P +T +++ G +R ++ F D + G+ P
Sbjct: 323 EGNFHQALVMHAEMLRHG-LTPSVITYTSLIHSMCKAGNMNRAME-FLDQMRVR-GLCPN 379
Query: 427 KEHYGCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIWGSLLGACSVHSNVDIGVFV 481
+ Y +VD + G + EA+ +++M F P+ + +L+ V ++ + V
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 114/252 (45%), Gaps = 22/252 (8%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y++L+ +R +E ++ M++ P F T LI Y L A + +EM
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
E+ +VV+++ +I+ +++ +A L +++ + P++ T+ H+L
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY-----------HTL 596
Query: 213 IIK-SNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLG 267
I SN + V SL+ + G + EA +FE + + D + +I G+ + G
Sbjct: 597 IENCSNIEFKSVV--SLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAG 654
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
+A L++++ G + VT +++ AL ++ V HVLRS S
Sbjct: 655 DIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAK 714
Query: 328 SLIDMYSKCGNL 339
L+++ + GN+
Sbjct: 715 VLVEINHREGNM 726
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 164/369 (44%), Gaps = 40/369 (10%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +LL E K + E ++V + M +P + + ++ L+T+ +L A F+ +
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 157 ERNVVS----WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
E ++ +T +I Y ++G S A+NL +ML+ G + T+ T+ +H L
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI-------LHGL 455
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGL 268
K + EA +F + ER D + T +I G+ +LG
Sbjct: 456 --------------------CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGN 495
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+ A++LF++++ + ++ + VTY ++L + +D K++ ++ E+ + +
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 329 LIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
L++ G+L + R++D M + TVM N+M+ GY + G + M E
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEG 615
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
V PD ++ ++ G + + M + G+ P Y ++ R +++
Sbjct: 616 FV-PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 445 EAFEFIKKM 453
EA ++KM
Sbjct: 675 EAEVVLRKM 683
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 150/331 (45%), Gaps = 23/331 (6%)
Query: 159 NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML--------GRQIH 210
++V++ +ISAYS +G +A L M G P +T+ TV + L +++
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS---C-TAIISGYAQL 266
+ +++S SLL K G + E +F + RDVV C ++++S + +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G ++AL F ++ G+ + V Y ++ + + N +L+ VV
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVM----SWNAMLVGYGKHGEGREVLELFTLMRE 382
N+++ K L + ++F+ M ER + + ++ G+ K G + +ELF M+E
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508
Query: 383 ENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGR 442
+ ++ D VT +L G G D +I+ DM S +I P Y +V+ L G
Sbjct: 509 K-RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI--LPTPISYSILVNALCSKGH 565
Query: 443 VEEAFEFIKKM---PFEPTAAIWGSLL-GAC 469
+ EAF +M +PT I S++ G C
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYC 596
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 166/391 (42%), Gaps = 57/391 (14%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN L++ SK + E + M + P V+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVY-------------------------- 306
Query: 157 ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATV---XSMLGRQIHSLI 213
++ +I+ + G +A +F +MLRSG P+ T+ ++ G + +
Sbjct: 307 -----TYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 214 IKSNYDAHVYVG-----SSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYA 264
+ S+ + V SS++ ++ + G + +A F + E D V T +I GY
Sbjct: 362 VFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYC 421
Query: 265 QLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL-RSEVPSYV 323
+ G+ A++L ++ +G + VTY ++L L L ++ N + R+ P
Sbjct: 422 RKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSY 481
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTL 379
L LID + K GNL + +F M+E+ V+++N +L G+GK G+ E++
Sbjct: 482 TL-TILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540
Query: 380 MREENEVKPDGVTMLAVLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLG 438
M + E+ P ++ +++ CS G L + ++ +M S I +P ++
Sbjct: 541 MVSK-EILPTPISYSILVNALCSKGHLAE-AFRVWDEMISKNI--KPTVMICNSMIKGYC 596
Query: 439 RAGRVEEAFEFIKKM---PFEPTAAIWGSLL 466
R+G + F++KM F P + +L+
Sbjct: 597 RSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 124/294 (42%), Gaps = 40/294 (13%)
Query: 135 LIVLYTKCDSLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSG 190
LI Y + LR+A F + + ++ + A+I + + G+ A ++ ++ RSG
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 191 TEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPE 250
N VY + +++ KDGK+ + + E
Sbjct: 231 VGIN---------------------------VYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 251 R----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDH 306
+ D+V+ +IS Y+ GL EEA +L + G+G TY +V+ L +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 307 GKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMS----WNAMLV 362
K+V +LRS + SL+ K G++ + ++F M+ R V+ +++M+
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMS 383
Query: 363 GYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDM 416
+ + G + L F ++E + PD V ++ G G+ +++ +M
Sbjct: 384 LFTRSGNLDKALMYFNSVKEAGLI-PDNVIYTILIQGYCRKGMISVAMNLRNEM 436
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 140/276 (50%), Gaps = 17/276 (6%)
Query: 157 ERN-VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG--------R 207
+RN V+ + MI AY + +AL+LF M GT P+E T+ ++ ML +
Sbjct: 511 QRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQ 570
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDV----VSCTAIISGY 263
+I + ++ S ++++ Y + G + +A ++E + + V V ++I+G+
Sbjct: 571 RILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGF 630
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
A+ G+ EEA+ FR + G+QSN++ S++ A S + L+ ++V++ + SE V
Sbjct: 631 AESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDV 690
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQER---TVMSWNAMLVGYGKHGEGREVLELFTLM 380
NS++ + + G ++ + IF+ ++E+ V+S+ M+ Y G E +E+ M
Sbjct: 691 AASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEM 750
Query: 381 REENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDM 416
RE + D + V++ + G ++F++M
Sbjct: 751 RESGLLS-DCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 175/412 (42%), Gaps = 63/412 (15%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN+L + E QR+ A M+ + P +I Y + L DA +++ M
Sbjct: 553 YNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME 612
Query: 157 ERNV----VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX---SMLG--- 206
+ V V + ++I+ +++ G +A+ F M G + N ++ S +G
Sbjct: 613 KTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 207 --RQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER---DVVSCTAIIS 261
R+++ + S V +S+L + A G + EA IF L E+ DV+S ++
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMY 732
Query: 262 GYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT--ALSGLAS---------------- 303
Y +G+ +EA+++ ++R G+ S+ ++ V+ A G S
Sbjct: 733 LYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLL 792
Query: 304 LDHG--KQVHNHVLRSEVPSYVV--LQNSLID------------MYSKCGNLTYSRRIFD 347
LD G K + + + VPS V LQ + + ++S G Y+ +
Sbjct: 793 LDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYA---LE 849
Query: 348 TMQERTV-------MSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGC 400
+ QE T ++NA++ Y G+ L+ + M+E+ ++PD VT ++
Sbjct: 850 SCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKG-LEPDIVTQAYLVGIY 908
Query: 401 SHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKK 452
G+ + + +T G++ EP + + V D A R + A + +KK
Sbjct: 909 GKAGMVEGVKRVHSRLTFGEL--EPSQSLFKAVRDAYVSANRQDLA-DVVKK 957
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 147/370 (39%), Gaps = 100/370 (27%)
Query: 158 RNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSN 217
R ++ +I Y + G + A NLF +ML+SG + TF T+ G
Sbjct: 303 RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTH--------- 353
Query: 218 YDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFR 277
H+ SLL K E +GI D + ++S +A G E AL+ +R
Sbjct: 354 --GHLSEAESLL-------KKMEEKGI-----SPDTKTYNILLSLHADAGDIEAALEYYR 399
Query: 278 QLRGEGMQSNYVTYASVLTAL----------SGLASLDHGK-QVHNH----VLRSEVPSY 322
++R G+ + VT+ +VL L + +A +D ++ H +++ V
Sbjct: 400 KIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEG 459
Query: 323 VVLQ-------------------NSLIDMYSKCGNLTYSRRIF-----DTMQERTVMSWN 358
+V+Q ++ID+Y++ G + +F + Q V+ +N
Sbjct: 460 LVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYN 519
Query: 359 AMLVGYGKHGEGREVLELFTLMREENEVKPDGVT------MLAVL--------------- 397
M+ YGK + L LF M+ + PD T MLA +
Sbjct: 520 VMIKAYGKAKLHEKALSLFKGMKNQG-TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD 578
Query: 398 SGCSHG--------------GLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRV 443
SGC G GL +D++ M K GV+P + YG +++ +G V
Sbjct: 579 SGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAME--KTGVKPNEVVYGSLINGFAESGMV 636
Query: 444 EEAFEFIKKM 453
EEA ++ + M
Sbjct: 637 EEAIQYFRMM 646
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 159/325 (48%), Gaps = 35/325 (10%)
Query: 154 EMPER-NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
EM +R ++V+ + +I+ +G S+AL L +M+ G +P+E T+ V + L + +S
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEA 272
+ LD++ K E R I + VV + +I + G ++A
Sbjct: 228 LA--------------LDLFRK----MEERNI-----KASVVQYSIVIDSLCKDGSFDDA 264
Query: 273 LDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDM 332
L LF ++ +G++++ VTY+S++ L D G ++ ++ + VV ++LID+
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 333 YSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGKHGEGREVLELFTLMREENEVKP 388
+ K G L ++ +++ M R + +++N+++ G+ K E ++F LM + +P
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG-CEP 383
Query: 389 DGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFE 448
D VT +++ D G+ +F +++S G+ P Y +V ++G++ A E
Sbjct: 384 DIVTYSILINSYCKAKRVDDGMRLFREISSK--GLIPNTITYNTLVLGFCQSGKLNAAKE 441
Query: 449 FIKKM---PFEPTAAIWGSLL-GAC 469
++M P+ +G LL G C
Sbjct: 442 LFQEMVSRGVPPSVVTYGILLDGLC 466
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 158/342 (46%), Gaps = 29/342 (8%)
Query: 136 IVLYTKCD--SLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRS 189
IV+ + C S DA +F+EM + +VV+++++I G + +M+
Sbjct: 250 IVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 190 GTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVG--------SSLLDMYAKDGKIHEA 241
P+ TF+ + + ++ L K Y+ + G +SL+D + K+ +HEA
Sbjct: 310 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 369
Query: 242 RGIFECLP----ERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTA 297
+F+ + E D+V+ + +I+ Y + ++ + LFR++ +G+ N +TY +++
Sbjct: 370 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 429
Query: 298 LSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQE-RTVMS 356
L+ K++ ++ VP VV L+D G L + IF+ MQ+ R +
Sbjct: 430 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 489
Query: 357 ---WNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG-CSHGGLEDRGLDI 412
+N ++ G + + LF + ++ VKPD VT ++ G C G L + + +
Sbjct: 490 IGIYNIIIHGMCNASKVDDAWSLFCSLSDKG-VKPDVVTYNVMIGGLCKKGSLSEADM-L 547
Query: 413 FYDMTSGKIGVEPKKEHYGCVVDL-LGRAGRVEEAFEFIKKM 453
F M G P Y ++ LG +G + + E I++M
Sbjct: 548 FRKMKED--GCTPDDFTYNILIRAHLGGSGLI-SSVELIEEM 586
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/322 (19%), Positives = 137/322 (42%), Gaps = 47/322 (14%)
Query: 90 HDMKFKG-------YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKC 142
++M+ KG Y++L+ + +G ++ MI +P V + LI ++ K
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 143 DSLRDARHVFDEMPERNV----VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTF 198
L +A+ +++EM R + +++ ++I + + +A +F M+ G EP+ T+
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 199 ATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCT- 257
S L++ Y K ++ + +F + + ++ T
Sbjct: 389 ---------------------------SILINSYCKAKRVDDGMRLFREISSKGLIPNTI 421
Query: 258 ---AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHV 314
++ G+ Q G A +LF+++ G+ + VTY +L L L+ ++ +
Sbjct: 422 TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Query: 315 LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEG 370
+S + + + N +I + + +F ++ ++ V+++N M+ G K G
Sbjct: 482 QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSL 541
Query: 371 REVLELFTLMREENEVKPDGVT 392
E LF M+E+ PD T
Sbjct: 542 SEADMLFRKMKEDG-CTPDDFT 562
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 35/209 (16%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y+ L+N + + +G R+ + +P+ L++ + + L A+ +F EM
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
R +VV++ ++ G ++AL +F +M +S LG I+++
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS------------RMTLGIGIYNI 495
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLGL 268
II +A K+ +A +F L ++ DVV+ +I G + G
Sbjct: 496 IIHGMCNAS---------------KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTA 297
EA LFR+++ +G + TY ++ A
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRA 569
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 160/333 (48%), Gaps = 24/333 (7%)
Query: 156 PERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR-------- 207
P ++V ++ ++S ++ ++LF M G + +++ V + L R
Sbjct: 65 PLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 124
Query: 208 QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGY 263
+ ++K Y+ V SSL++ + + ++ +A + + E DVV II G
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTAL--SGLASLDHGKQVHNHVLRSEVPS 321
++GL +A++LF ++ +G++++ VTY S++ L SG S D + + + V+R VP+
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS-DAARLMRDMVMRDIVPN 243
Query: 322 YVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVLELF 377
V+ ++ID++ K G + + ++++ M R V ++N+++ G HG E ++
Sbjct: 244 -VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 378 TLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLL 437
LM + + PD VT +++G D G +F +M + G+ Y ++
Sbjct: 303 DLMVTKGCL-PDVVTYNTLINGFCKSKRVDEGTKLFREM--AQRGLVGDTITYNTIIQGY 359
Query: 438 GRAGRVEEAFEFIKKMPFEPTAAIWGSLL-GAC 469
+AGR + A E +M P + LL G C
Sbjct: 360 FQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLC 392
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 128/300 (42%), Gaps = 44/300 (14%)
Query: 97 YNALL-NECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEM 155
YN+L+ C S R + R+ M+ +P+V T +I ++ K +A +++EM
Sbjct: 212 YNSLVAGLCCSGR-WSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 156 PER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHS 211
R +V ++ ++I+ G +A + M+ G P+ T+ T
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT----------- 319
Query: 212 LIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQLG 267
L++ + K ++ E +F + +R D ++ II GY Q G
Sbjct: 320 ----------------LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 268 LDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQN 327
+ A ++F ++ + N TY+ +L L ++ + ++ +SE+ + N
Sbjct: 364 RPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 328 SLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREE 383
+I K GN+ + +F ++ + V+S+ M+ G+ + + + L+ M+E+
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 153/361 (42%), Gaps = 40/361 (11%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y ++ S L + MI + P+V + T LI + + DA V EM
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
E+ ++ + ++I S+ +A + V+M+ +G +PN FT+ S
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISG-------- 531
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFEC--LPERDVVSCTAIISGYAQLGLDE 270
Y+ +S + + D + E R EC LP + V CT +I+ Y + G
Sbjct: 532 ----------YIEAS--EFASADKYVKEMR---ECGVLPNK--VLCTGLINEYCKKGKVI 574
Query: 271 EALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLI 330
EA +R + +G+ + TY ++ L +D +++ + + V LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 331 DMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
+ +SK GN+ + IFD M E V+ +N +L G+ + GE + EL M + +
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-L 693
Query: 387 KPDGVTMLAVLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE 445
P+ VT ++ G C G L + +F +M G+ P Y +VD R VE
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAE-AFRLFDEMKLK--GLVPDSFVYTTLVDGCCRLNDVER 750
Query: 446 A 446
A
Sbjct: 751 A 751
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 161/408 (39%), Gaps = 63/408 (15%)
Query: 95 KGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
K Y L+N + + + + M P VF LI ++K +++ A +FDE
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 155 MPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIH 210
M E NV+ + ++ + + G +A L +M G PN T+ T+
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI--------- 703
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS----CTAIISGYAQL 266
+D Y K G + EA +F+ + + +V T ++ G +L
Sbjct: 704 ------------------IDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRL 745
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY---- 322
E A+ +F + +G S+ + +++ + + +V N ++ +
Sbjct: 746 NDVERAITIFGTNK-KGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPN 804
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGREVLELFT 378
V N +ID K GNL ++ +F MQ TV+++ ++L GY K G E+ +F
Sbjct: 805 DVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFD 864
Query: 379 LMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDL-- 436
++PD + +++ G+ + L + D K V+ GC + +
Sbjct: 865 EAIAAG-IEPDHIMYSVIINAFLKEGMTTKAL-VLVDQMFAKNAVDD-----GCKLSIST 917
Query: 437 ----------LGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSN 474
+G E+ E + ++ + P +A L+ + SN
Sbjct: 918 CRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSN 965
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 154/358 (43%), Gaps = 27/358 (7%)
Query: 136 IVLYTKCDSLRDARHVFDEMPERNVV----SWTAMISAYSQRGYASQALNLFVQMLRSGT 191
I + +K + A+ +FD M ++ ++ ++I Y + Q L V+M +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 192 EPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARG 243
+ +T+ TV + I +I S +V + ++L+ + ++ + +A
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 244 IFECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALS 299
+ + + E+ D+ ++I G ++ +EA ++ G++ N TY + ++
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYI 533
Query: 300 GLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM---- 355
+ + + V VL LI+ Y K G + + + +M ++ ++
Sbjct: 534 EASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAK 593
Query: 356 SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
++ ++ G K+ + + E+F MR + + PD + +++G S G + IF +
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKG-IAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE---PTAAIWGSLL-GAC 469
M G+ P Y ++ R+G +E+A E + +M + P A + +++ G C
Sbjct: 653 MVEE--GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYC 708
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 170/416 (40%), Gaps = 50/416 (12%)
Query: 97 YNALLNECVSKRALREGQRVHA-----HMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHV 151
YN L+N R +EG++ A K +P+ LI Y K A +
Sbjct: 348 YNILIN-----RLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 152 FDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML-- 205
+M ER ++V++ +I G+ A+N+ V+++ G P+ + + S L
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 206 ------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVS 255
+ + S ++ N YV ++L+D + + G EAR +F E+ DVV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 256 CTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
A+I G+ + G+ +EAL ++ E + + TY++++ + ++ ++
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 316 RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSWNAMLVGYGKHGEGR 371
+++ VV SLI+ + G+ + F MQ R V+++ ++ K
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 372 EVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG 431
E + + N+ P+ VT +L G F TSGK+ EP ++
Sbjct: 643 EKAVYYWELMMTNKCVPNEVTFNCLLQG-------------FVKKTSGKVLAEPDGSNH- 688
Query: 432 CVVDLLGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACSVHSNVDIGVFVGHRLLE 487
G++ E F +K + AA + S L VH V ++++
Sbjct: 689 ------GQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVK 738
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/440 (20%), Positives = 164/440 (37%), Gaps = 101/440 (22%)
Query: 126 LPSVFLRTRLIVLYTKCDSLRDARHVFDEMPER--------------------------- 158
+P V L+ L K L DAR V+DEM +R
Sbjct: 167 VPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRK 226
Query: 159 ------------NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLG 206
N+V + +I Y + G A +F ++ G P TF T+ +
Sbjct: 227 LIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFC 286
Query: 207 RQ--------IHSLIIKSNYDAHVYVGSSLLDMYAKDG-KIHEARGI-----FECLPERD 252
++ + S + + V+ ++++D + G K+ A I +C P D
Sbjct: 287 KEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKP--D 344
Query: 253 VVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLD------- 305
V + +I+ + G E A+ + +G+ N ++YA ++ A D
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 306 -------------HGKQVHNHVLRSEVPSYVVLQNSLID--------MYS-------KCG 337
+G +H V+ + V ++ LID +Y+ K G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Query: 338 NLTYSRRIFDTMQERTVMS----WNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTM 393
++ +F M +R ++ + ++ G+ + G+ E ++F+L E+ VK D V
Sbjct: 465 RFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG-VKVDVVHH 523
Query: 394 LAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA---FEFI 450
A++ G G+ D L M + P K Y ++D + + A F ++
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHL--VPDKFTYSTIIDGYVKQQDMATAIKIFRYM 581
Query: 451 KKMPFEPTAAIWGSLL-GAC 469
+K +P + SL+ G C
Sbjct: 582 EKNKCKPNVVTYTSLINGFC 601
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 141/332 (42%), Gaps = 36/332 (10%)
Query: 148 ARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXS 203
A + D++P + +V ++T ++ AYS+ G +A++LF +M G P T+ +
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 204 MLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGY 263
+ G+ S + L +M +K K E +C+ ++S
Sbjct: 254 VFGKMGRSW---------RKILGVLDEMRSKGLKFDE-------------FTCSTVLSAC 291
Query: 264 AQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYV 323
A+ GL EA + F +L+ G + VTY ++L V + + P+
Sbjct: 292 AREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADS 351
Query: 324 VLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM----SWNAMLVGYGKHGEGREVLELFTL 379
V N L+ Y + G + + + M ++ VM ++ ++ YGK G+ E L+LF
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 380 MREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGR 439
M+E V P+ T AVLS + + + DM S G P + + ++ L G
Sbjct: 412 MKEAGCV-PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN--GCSPNRATWNTMLALCGN 468
Query: 440 AGR---VEEAFEFIKKMPFEPTAAIWGSLLGA 468
G V F +K FEP + +L+ A
Sbjct: 469 KGMDKFVNRVFREMKSCGFEPDRDTFNTLISA 500
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 164/387 (42%), Gaps = 44/387 (11%)
Query: 87 LCGHDMKFKG-------YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLY 139
LC DMK G +N +L C +K + RV M + P LI Y
Sbjct: 444 LC--DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 140 TKCDSLRDARHVFDEMPERN----VVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNE 195
+C S DA ++ EM V ++ A+++A +++G N+ M G +P E
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTE 561
Query: 196 FTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVS 255
++ SL+++ Y+G ++ K+G+I + + L +
Sbjct: 562 TSY------------SLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANF-K 608
Query: 256 CTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVL 315
C A L E A LF++ G + + V + S+L+ + D + + +
Sbjct: 609 CRA-------LAGSERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 316 RSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV----MSWNAMLVGYGKHGEGR 371
+ +V NSL+DMY + G + I T+++ + +S+N ++ G+ + G +
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQ 718
Query: 372 EVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYG 431
E + + + M E ++P T +SG + G+ D+ M K P + +
Sbjct: 719 EAVRMLSEMTERG-IRPCIFTYNTFVSGYTAMGMFAEIEDVIECM--AKNDCRPNELTFK 775
Query: 432 CVVDLLGRAGRVEEAFEFIKKM-PFEP 457
VVD RAG+ EA +F+ K+ F+P
Sbjct: 776 MVVDGYCRAGKYSEAMDFVSKIKTFDP 802
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 161/392 (41%), Gaps = 27/392 (6%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
++ CG++ YNALL E V M + L+ Y +
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 144 SLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
++A V + M ++ N +++T +I AY + G +AL LF M +G PN T+
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 200 TVXSMLGRQIHS-------LIIKSN-YDAHVYVGSSLLDMYAKDGKIHEARGIFECL--- 248
V S+LG++ S +KSN + +++L + G +F +
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 249 ---PERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLD 305
P+RD + +IS Y + G + +A ++ ++ G + TY ++L AL+
Sbjct: 486 GFEPDRDTFN--TLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWR 543
Query: 306 HGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM-SW---NAML 361
G+ V + + + ++ Y+K GN RI + ++E + SW +L
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL 603
Query: 362 VGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKI 421
+ K FTL ++ KPD V ++LS + + D+ I +
Sbjct: 604 LANFKCRALAGSERAFTLFKKHG-YKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED-- 660
Query: 422 GVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
G+ P Y ++D+ R G +A E +K +
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 160/402 (39%), Gaps = 67/402 (16%)
Query: 92 MKFKGY--NALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDAR 149
+KF + + +L+ C + LRE + A + Y P L+ ++ K +A
Sbjct: 277 LKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEAL 336
Query: 150 HVFDEMPERNV----VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML 205
V EM E + V++ +++AY + G++ +A + M + G PN T+ TV
Sbjct: 337 SVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTV---- 392
Query: 206 GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVV--SCT--AIIS 261
+D Y K GK EA +F + E V +CT A++S
Sbjct: 393 -----------------------IDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 262 GYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV-- 319
+ E + + ++ G N T+ ++L AL G +D + N V R
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMD---KFVNRVFREMKSC 485
Query: 320 ---PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ----ERTVMSWNAMLVGYGKHGEGRE 372
P N+LI Y +CG+ + +++ M V ++NA+L + G+ R
Sbjct: 486 GFEPDRDTF-NTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRS 544
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGG-------LEDRGLDIFYDMTSGKIGVEP 425
+ + M+ + KP + +L + GG +E+R + G+I
Sbjct: 545 GENVISDMKSKG-FKPTETSYSLMLQCYAKGGNYLGIERIENR-------IKEGQIFPSW 596
Query: 426 KKEHYGCVVDLLGRA-GRVEEAFEFIKKMPFEPTAAIWGSLL 466
+ + RA E AF KK ++P I+ S+L
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 116/273 (42%), Gaps = 22/273 (8%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M G + YNALLN K R G+ V + M + P+ + ++ Y K
Sbjct: 516 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 575
Query: 144 SLRDARHVFDEMPERNVV-SW----TAMISAYSQRGYAS--QALNLFVQMLRSGTEPNEF 196
+ + + + E + SW T +++ + R A +A LF + G +P+
Sbjct: 576 NYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFK---KHGYKPDMV 632
Query: 197 TFATVXSMLGRQ--------IHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECL 248
F ++ S+ R I I + + +SL+DMY + G+ +A I + L
Sbjct: 633 IFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTL 692
Query: 249 PER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASL 304
+ D+VS +I G+ + GL +EA+ + ++ G++ TY + ++ + +
Sbjct: 693 EKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMF 752
Query: 305 DHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCG 337
+ V + +++ + ++D Y + G
Sbjct: 753 AEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/364 (23%), Positives = 159/364 (43%), Gaps = 27/364 (7%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPE----RNVVSWTAMISAYSQRGYASQALNL 182
P+ + T +I L + L VFDEMP R+V S+TA+I+AY + G +L L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 183 FVQMLRSGTEPNEFTFATVXSMLGR---------QIHSLIIKSNYDAHVYVGSSLLDMYA 233
+M P+ T+ TV + R + + + + ++LL A
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 234 KDGKIHEARGIFECLPE----RDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYV 289
G EA +F + + D+ + + ++ + +L E+ DL ++ G +
Sbjct: 259 IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDIT 318
Query: 290 TYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM 349
+Y +L A + S+ V + + + + L++++ + G R++F M
Sbjct: 319 SYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM 378
Query: 350 QERTV----MSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGL 405
+ ++N ++ +G+ G +EV+ LF M EEN ++PD T ++ C GGL
Sbjct: 379 KSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEEN-IEPDMETYEGIIFACGKGGL 437
Query: 406 EDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEE---AFEFIKKMPFEPTAAIW 462
+ I MT+ I P + Y V++ G+A EE AF + ++ P+ +
Sbjct: 438 HEDARKILQYMTANDI--VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 463 GSLL 466
SLL
Sbjct: 496 HSLL 499
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 173/411 (42%), Gaps = 79/411 (19%)
Query: 100 LLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMPERN 159
L N VS + V + + K LP R + ++ SL D VF E
Sbjct: 60 LGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALVFKE----- 114
Query: 160 VVSWTAMISAYSQRGYASQALNLFVQMLRS-GTEPNEFTFATVXSMLGR--------QIH 210
++ RG ++L LF M R +PNE + + S+LGR ++
Sbjct: 115 ----------FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQL 266
+ V+ ++L++ Y ++G+ + + + + +++ +I+ A+
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG 224
Query: 267 GLDEEA-LDLFRQLRGEGMQSNYVTYASVLT--ALSGLA--------SLDHGKQV----- 310
GLD E L LF ++R EG+Q + VTY ++L+ A+ GL +++ G V
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 311 HNHVLRS------------------------EVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
++H++ + ++ SY N L++ Y+K G++ + +F
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSY----NVLLEAYAKSGSIKEAMGVF 340
Query: 347 DTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSH 402
MQ +++ +L +G+ G +V +LF M+ N PD T ++
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN-TDPDAATYNILIEVFGE 399
Query: 403 GGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
GG + +F+DM I EP E Y ++ G+ G E+A + ++ M
Sbjct: 400 GGYFKEVVTLFHDMVEENI--EPDMETYEGIIFACGKGGLHEDARKILQYM 448
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 145/381 (38%), Gaps = 71/381 (18%)
Query: 82 LLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
L +MA G YN LL +++E V M P+ + L+ L+ +
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 142 CDSLRDARHVFDEMPERNV----VSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFT 197
D R +F EM N ++ +I + + GY + + LF M+ EP+ T
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 198 FATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE-ARGIFECLPERDVV-- 254
+ + G+ G +HE AR I + + D+V
Sbjct: 425 YEGIIFACGK----------------------------GGLHEDARKILQYMTANDIVPS 456
Query: 255 --SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHN 312
+ T +I + Q L EEAL F + G + T+ S+L + + + + + +
Sbjct: 457 SKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILS 516
Query: 313 HVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGRE 372
++ S +P R ++NA + Y + G+ E
Sbjct: 517 RLVDSGIP-------------------------------RNRDTFNAQIEAYKQGGKFEE 545
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGC 432
++ + M E++ PD T+ AVLS S L D + F +M + I P Y
Sbjct: 546 AVKTYVDM-EKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDI--LPSIMCYCM 602
Query: 433 VVDLLGRAGRVEEAFEFIKKM 453
++ + G+ R ++ E +++M
Sbjct: 603 MLAVYGKTERWDDVNELLEEM 623
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 167/390 (42%), Gaps = 23/390 (5%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
QM + G N LLN L MIK + PS+ L+ + + D
Sbjct: 106 QMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGD 165
Query: 144 SLRDARHVFDEMP----ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
+ DA ++FD+M + NVV + +I + AL+L +M + G P+ T+
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 200 TVXSML---GR-----QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
++ S L GR ++ S + K V+ ++L+D K+G++ EA +E + R
Sbjct: 226 SLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR 285
Query: 252 ----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG 307
D+V+ + +I G +EA ++F + +G + VTY+ ++ ++HG
Sbjct: 286 SLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHG 345
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTM----QERTVMSWNAMLVG 363
++ + + V V LI Y + G L + IF M ++++N +L G
Sbjct: 346 MKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHG 405
Query: 364 YGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGV 423
+G+ + L + M ++N + D VT ++ G G DI+ + G+
Sbjct: 406 LCDNGKIEKALVILADM-QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ--GL 462
Query: 424 EPKKEHYGCVVDLLGRAGRVEEAFEFIKKM 453
P Y ++ L + G EA +KM
Sbjct: 463 MPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/391 (20%), Positives = 168/391 (42%), Gaps = 55/391 (14%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +L + L + + HM++ R LPS+ +RL+ +K +++++M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 157 ----ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSL 212
N+ + +++ + + S AL+ +M++ G EP+ TF
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFG------------- 155
Query: 213 IIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP----ERDVVSCTAIISGYAQLGL 268
SLL+ + + ++++A +F+ + + +VV II G +
Sbjct: 156 --------------SLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQ 201
Query: 269 DEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNS 328
+ ALDL ++ +G+ + VTY S+++ L ++ + + + E+ V N+
Sbjct: 202 VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNA 261
Query: 329 LIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVLELFTLMREEN 384
LID K G ++ + ++ M R+ +++++ ++ G + E E+F M +
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 385 EVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVE 444
PD VT +++G + G+ +F +M+ + GV Y ++ RAG++
Sbjct: 322 -CFPDVVTYSILINGYCKSKKVEHGMKLFCEMS--QRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 445 EAFEFIKKMPFEPTAAIWGSLLGACSVHSNV 475
A E ++M F C VH N+
Sbjct: 379 VAEEIFRRMVF-------------CGVHPNI 396
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 134/320 (41%), Gaps = 20/320 (6%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
QM G+ YN +++ + + + M K P V LI
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 144 SLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
DA + M +R +V ++ A+I A + G S+A + +M+R +P+ T++
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 200 TVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER 251
+ L ++ ++ V S L++ Y K K+ +F + +R
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 252 DVV----SCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHG 307
VV + T +I GY + G A ++FR++ G+ N +TY +L L ++
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 308 KQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM----SWNAMLVG 363
+ + ++ + + +V N +I K G + + I+ ++ + +M ++ M++G
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 364 YGKHGEGREVLELFTLMREE 383
K G RE LF M+E+
Sbjct: 476 LYKKGLRREADALFRKMKED 495
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 74/332 (22%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPE-----RNVVSWTAMISAYSQRGYASQALN 181
P + LI + K + L A +F ++ +VV++T+MIS Y + G +A +
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 182 LFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEA 241
L MLR G P TF + L+D YAK G++ A
Sbjct: 299 LLDDMLRLGIYPTNVTF---------------------------NVLVDGYAKAGEMLTA 331
Query: 242 RGI------FECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL 295
I F C P DVV+ T++I GY ++G + L+ ++ GM N TY+ ++
Sbjct: 332 EEIRGKMISFGCFP--DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 296 TALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM 355
AL L +++ + ++ + N +ID + K G + + I + M
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM------ 443
Query: 356 SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
E+ + KPD +T ++ G G + IF+
Sbjct: 444 --------------------------EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
M + IG P K ++ L +AG +EA+
Sbjct: 478 MVA--IGCSPDKITVSSLLSCLLKAGMAKEAY 507
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 132/332 (39%), Gaps = 74/332 (22%)
Query: 127 PSVFLRTRLIVLYTKCDSLRDARHVFDEMPE-----RNVVSWTAMISAYSQRGYASQALN 181
P + LI + K + L A +F ++ +VV++T+MIS Y + G +A +
Sbjct: 239 PDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASS 298
Query: 182 LFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEA 241
L MLR G P TF + L+D YAK G++ A
Sbjct: 299 LLDDMLRLGIYPTNVTF---------------------------NVLVDGYAKAGEMLTA 331
Query: 242 RGI------FECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL 295
I F C P DVV+ T++I GY ++G + L+ ++ GM N TY+ ++
Sbjct: 332 EEIRGKMISFGCFP--DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389
Query: 296 TALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM 355
AL L +++ + ++ + N +ID + K G + + I + M
Sbjct: 390 NALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEM------ 443
Query: 356 SWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYD 415
E+ + KPD +T ++ G G + IF+
Sbjct: 444 --------------------------EKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHK 477
Query: 416 MTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAF 447
M + IG P K ++ L +AG +EA+
Sbjct: 478 MVA--IGCSPDKITVSSLLSCLLKAGMAKEAY 507
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 163/363 (44%), Gaps = 31/363 (8%)
Query: 133 TRLIVLYTKCDSLRDARHVFDEMP----ERNVVSWTAMISAYSQRGYASQALNLFVQMLR 188
T LI + +C L A V +M E ++V++ +++ + A +L + M++
Sbjct: 110 TILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 189 SGTEPNEFTFATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHE 240
SG EPN + T+ L + ++ + + K A V ++LL G+ +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 241 ARGIFECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLT 296
A + + +R DVV+ TA+I + + G +EA +L++++ + N VTY S++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 297 ALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ----ER 352
L L K+ + + VV N+LI + K + ++F M
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 353 TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDI 412
+ ++N ++ GY + G+ R L++F M V PD +T +L G G + L
Sbjct: 350 DIFTYNTLIHGYCQVGKLRVALDIFCWMVSR-RVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 413 FYDMTSGK--IGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMPFE---PTAAIWG-SLL 466
F DM + IG+ Y ++ L +A +VE+A+E ++P E P A + +L
Sbjct: 409 FDDMRESEKYIGIVA----YNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMIL 464
Query: 467 GAC 469
G C
Sbjct: 465 GLC 467
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 153/320 (47%), Gaps = 58/320 (18%)
Query: 119 HMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHV--FDEMPE-----RNVVSWTAMISAYS 171
M+ ++ LPS+ TRL+ T +LR V F + E ++ S+T +I +
Sbjct: 61 EMVHSQPLPSIVDFTRLL---TATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFC 117
Query: 172 QRGYASQALNLFVQMLRSGTEPNEFTFATVX---SMLGR-----QIHSLIIKSNYDAHVY 223
+ S AL++ +M++ G EP+ TF ++ ++ R + L++KS Y+ +V
Sbjct: 118 RCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVV 177
Query: 224 VGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEG 283
V ++L+D K+G+++ A L+L ++ +G
Sbjct: 178 VYNTLIDGLCKNGELNIA-------------------------------LELLNEMEKKG 206
Query: 284 MQSNYVTYASVLTAL--SGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTY 341
+ ++ VTY ++LT L SG S D + + + + RS P VV +LID++ K GNL
Sbjct: 207 LGADVVTYNTLLTGLCYSGRWS-DAARMLRDMMKRSINPD-VVTFTALIDVFVKQGNLDE 264
Query: 342 SRRIFDTMQERTV----MSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVL 397
++ ++ M + +V +++N+++ G HG + + F LM + P+ VT ++
Sbjct: 265 AQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG-CFPNVVTYNTLI 323
Query: 398 SGCSHGGLEDRGLDIFYDMT 417
SG + D G+ +F M+
Sbjct: 324 SGFCKFRMVDEGMKLFQRMS 343
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 29/266 (10%)
Query: 143 DSLRDARHVFDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVX 202
D+ R R + +VV++TA+I + ++G +A L+ +M++S +PN T+ ++
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 203 SMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAIISG 262
+ G +H + YDA D+ A G C P +VV+ +ISG
Sbjct: 289 N--GLCMHGRL----YDA-----KKTFDLMASKG----------CFP--NVVTYNTLISG 325
Query: 263 YAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSY 322
+ + + +E + LF+++ EG ++ TY +++ + L + ++ V
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 323 VVLQNSLIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGYGKHGEGREVLELFT 378
++ L+ G + + FD M+E ++++N M+ G K + + ELF
Sbjct: 386 IITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFC 445
Query: 379 LMREENEVKPDGVT-MLAVLSGCSHG 403
+ E VKPD T + +L C +G
Sbjct: 446 RLPVEG-VKPDARTYTIMILGLCKNG 470
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/434 (20%), Positives = 196/434 (45%), Gaps = 75/434 (17%)
Query: 84 QMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCD 143
+M + G YN L+N L + M+K Y P + L+ + +
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162
Query: 144 SLRDARHVFDEMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFA 199
+ DA + D+M E + V++T +I AS+A+ L +M++ G +P+ T+
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 200 TVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAI 259
V ++ L + + D + +LL+ K+ A+ E +VV + +
Sbjct: 223 AV-------VNGLCKRGDTD----LALNLLN------KMEAAK------IEANVVIYSTV 259
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEV 319
I + +++AL+LF ++ +G++ N +TY+S+++ L ++ + ++ ++
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 320 PSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERT----VMSWNAMLVGY---GKHGEGRE 372
+V ++LID + K G L + ++++ M +R+ + ++++++ G+ + GE ++
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 373 VLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSG------------- 419
+LEL ++R+ + P+ VT +++G D+G+++F +M+
Sbjct: 380 MLEL--MIRK--DCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI 435
Query: 420 --------------------KIGVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFE 456
+GV P Y ++D L + G++ +A FE++++ E
Sbjct: 436 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 495
Query: 457 PTAAIWGSLL-GAC 469
P + ++ G C
Sbjct: 496 PDIYTYNIMIEGMC 509
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 127/269 (47%), Gaps = 30/269 (11%)
Query: 131 LRTRLIVLYTKCDSL------RDARHVFDEMPER----NVVSWTAMISAYSQRGYASQAL 180
+ +++ T DSL DA ++F EM + NV++++++IS G S A
Sbjct: 249 IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDAS 308
Query: 181 NLFVQMLRSGTEPNEFTFATVXSML--------GRQIHSLIIKSNYDAHVYVGSSLLDMY 232
L M+ PN TF+ + +++ +IK + D +++ SSL++ +
Sbjct: 309 RLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGF 368
Query: 233 AKDGKIHEARGIFE------CLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQS 286
++ EA+ + E CLP +VV+ +I+G+ + ++ ++LFR++ G+
Sbjct: 369 CMLDRLGEAKQMLELMIRKDCLP--NVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVG 426
Query: 287 NYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIF 346
N VTY +++ D+ + V ++ V ++ N L+D K G L + +F
Sbjct: 427 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 486
Query: 347 DTMQERT----VMSWNAMLVGYGKHGEGR 371
+ +Q T + ++N M+ G K G+ +
Sbjct: 487 EYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/475 (20%), Positives = 186/475 (39%), Gaps = 101/475 (21%)
Query: 85 MALCGHDM---KFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 141
++LCG F Y +L + + + M+ +R LPS+ TRL+ + K
Sbjct: 36 LSLCGFCFWIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAK 95
Query: 142 CDSLRDARHVFDEMP---------------------------------------ERNVVS 162
+ +F++M E ++V+
Sbjct: 96 MNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVT 155
Query: 163 WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIH------------ 210
+T++++ Y A+ LF Q+L G +PN T+ T+ L + H
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMG 215
Query: 211 ------------SLI-------------------IKSNYDAHVYVGSSLLDMYAKDGKIH 239
+L+ +K + +V ++L+D + K GK+
Sbjct: 216 TNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLM 275
Query: 240 EARGIFECLPER----DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVL 295
EA+ ++ + + DV + ++I+G GL +EA +F + G N V Y +++
Sbjct: 276 EAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLI 335
Query: 296 TALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER--- 352
++ G ++ + + V + + LI Y G ++ +F+ M R
Sbjct: 336 HGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAP 395
Query: 353 -TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSG-CSHGGLEDRGL 410
+ ++N +L G +G+ + L +F MR+ E+ + VT ++ G C G +ED
Sbjct: 396 PDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR-EMDINIVTYTIIIQGMCKLGKVED-AF 453
Query: 411 DIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIW 462
D+F + S G++P Y ++ R G + EA KKM F P +++
Sbjct: 454 DLFCSLFSK--GMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/532 (19%), Positives = 210/532 (39%), Gaps = 68/532 (12%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
Y +++ L E + H+ K R +P + +I+ Y +A + +
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR----- 207
+ +V+++ +++ + G +AL +F +M + PN T+ + ML R
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGKLD 394
Query: 208 ---QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFE------CLPERDVVSCTA 258
++ + K+ +V + ++D K K+ EA +FE C P D ++ +
Sbjct: 395 TAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP--DEITFCS 452
Query: 259 IISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSE 318
+I G ++G ++A ++ ++ ++N + Y S++ + G +++ ++
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 319 VPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTVM----SWNAMLVGYGKHGEGREVL 374
+ L N+ +D K G R +F+ ++ R + S++ ++ G K G E
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 375 ELFTLMREENEV----------------------------------KPDGVTMLAVLSGC 400
ELF M+E+ V +P VT +V+ G
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 401 SHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKM---PFEP 457
+ D +F + S +I E Y ++D G+ GR++EA+ ++++ P
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRI--ELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 690
Query: 458 TAAIWGSLLGACSVHSNVDIGVFVGHRLLEIE-TGNAGNYFFLSXDVRSLRDMMLKKAVM 516
W SLL A ++ + + E++ T N Y L + +R
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 517 KEPGRSRIELDQVLHTFHASDRSHPRREEVYIKVKELSVRFKEAGYVPDLSC 568
+E + ++ + +T S + + L RFK G VPD +C
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGN---IAEAGALFDRFKANGGVPDSAC 799
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/432 (19%), Positives = 170/432 (39%), Gaps = 61/432 (14%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDEMP 156
YN L++ L + M K P+V ++ K L +A +F+EM
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMD 439
Query: 157 ER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML------- 205
+ + +++ ++I + G A ++ +ML S N + ++
Sbjct: 440 YKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKE 499
Query: 206 -GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER------------- 251
G +I+ +I N + + ++ +D K G+ + R +FE + R
Sbjct: 500 DGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILI 559
Query: 252 --------------------------DVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQ 285
D + +I G+ + G +A L +++ +G +
Sbjct: 560 HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 286 SNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRI 345
VTY SV+ L+ + LD + + VV+ +SLID + K G + + I
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 346 FDTMQER----TVMSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCS 401
+ + ++ + +WN++L K E E L F M+E + P+ VT +++G
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL-KCTPNQVTYGILINGLC 738
Query: 402 HGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA---FEFIKKMPFEPT 458
++ + +M K G++P Y ++ L +AG + EA F+ K P
Sbjct: 739 KVRKFNKAFVFWQEMQ--KQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPD 796
Query: 459 AAIWGSLLGACS 470
+A + +++ S
Sbjct: 797 SACYNAMIEGLS 808
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 146/359 (40%), Gaps = 22/359 (6%)
Query: 78 LQQPLLQMALCGHDMKFKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIV 137
L Q L +M++ G ++ CV LREG V M K ++ P+ T LI
Sbjct: 117 LDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIG 176
Query: 138 LYTKCDSLRDARHVFDEMP----ERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEP 193
++ + +F +M E V +T +I +++ G AL+L +M S +
Sbjct: 177 AFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDA 236
Query: 194 NEFTFATVXSMLGR--------QIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIF 245
+ + G+ + I + +S++ + K ++ EA +F
Sbjct: 237 DIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMF 296
Query: 246 ECLPERDVVSCT----AIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGL 301
E L + V CT +I GY G +EA L + R +G + + Y +LT L +
Sbjct: 297 EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKM 356
Query: 302 ASLDHGKQVHNHVLRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQER----TVMSW 357
+D +V + + P+ + N LIDM + G L + + D+MQ+ V +
Sbjct: 357 GKVDEALKVFEEMKKDAAPN-LSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTV 415
Query: 358 NAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDM 416
N M+ K + E +F M + PD +T +++ G G D ++ M
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKM 473
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 144/367 (39%), Gaps = 70/367 (19%)
Query: 95 KGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
+ YN+LL R ++ M + PSV +++ K + LR+ V
Sbjct: 99 ESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQM 158
Query: 155 MPE---RNVVS-WTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIH 210
M + R S +T +I A+S ++ L LF QM G EP
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPT---------------- 202
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLP----ERDVVSCTAIISGYAQL 266
V++ ++L+ +AK+G++ A + + + + D+V I + ++
Sbjct: 203 -----------VHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
G + A F ++ G++ + VTY S++ L LD ++ H
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH------------- 298
Query: 327 NSLIDMYSKCGNLTYSRRIFDTMQERTVMSWNAMLVGYGKHGEGREVLELFTLMREENEV 386
L +RR+ T ++N M++GYG G+ E L R + +
Sbjct: 299 ------------LEKNRRVPCT------YAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 387 KPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEA 446
P + +L+ G D L +F +M K P Y ++D+L RAG+++ A
Sbjct: 341 -PSVIAYNCILTCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDMLCRAGKLDTA 396
Query: 447 FEFIKKM 453
FE M
Sbjct: 397 FELRDSM 403
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 170/398 (42%), Gaps = 50/398 (12%)
Query: 97 YNALLNECVSKRALREGQRVHAHMIKTRY--LPSVFLRTRLIVLYTKCDSLRDARHVFDE 154
+N L++ V+ L + + V + M+ T Y +P V LI Y K + A V +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMV-TSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 155 MPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGRQIH 210
M + NV S+T ++ + + G +A N+ +M G +PN F
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGF------------ 462
Query: 211 SLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPER----DVVSCTAIISGYAQL 266
+ L+ + K+ +I EA IF +P + DV + ++ISG ++
Sbjct: 463 ---------------NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 267 GLDEEALDLFRQLRGEGMQSNYVTYASVLTALSGLASLDHGKQVHNHVLRSEVPSYVVLQ 326
+ AL L R + EG+ +N VTY +++ A + +++ N ++ P +
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITY 567
Query: 327 NSLIDMYSKCGNLTYSRRIFDTM----QERTVMSWNAMLVGYGKHGEGREVLELFTLMRE 382
NSLI + G + +R +F+ M + +S N ++ G + G E +E M
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 383 ENEVKPDGVTMLAVLSG-CSHGGLEDRGLDIFYDMTSGKIGVEPKKEHYGCVVDLLGRAG 441
PD VT ++++G C G +ED GL +F + + G+ P + ++ L + G
Sbjct: 628 RGST-PDIVTFNSLINGLCRAGRIED-GLTMFRKLQAE--GIPPDTVTFNTLMSWLCKGG 683
Query: 442 RVEEAFEFIKKM---PFEPTAAIWGSLLGACSVHSNVD 476
V +A + + F P W LL + +D
Sbjct: 684 FVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 164/386 (42%), Gaps = 32/386 (8%)
Query: 94 FKGYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDARHVFD 153
FK YN +L VS + V M+ + P++F ++ + + + A +
Sbjct: 182 FKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLR 241
Query: 154 EMPER----NVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSML---- 205
+M + N V + +I + S+ ++AL L +M G P+ TF V L
Sbjct: 242 DMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 301
Query: 206 -----GRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKIHEARGIFECLPERDVVSCTAII 260
+ ++ ++I+ + G L++ K G++ A+ +F +P+ ++V +I
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYG-YLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLI 360
Query: 261 SGYAQLG-LDEEALDLFRQLRGEGMQSNYVTYASVL-----TALSGLASLDHGKQVHNHV 314
G+ G LD+ L + G+ + TY S++ L GLA L+ + N
Sbjct: 361 HGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA-LEVLHDMRNKG 419
Query: 315 LRSEVPSYVVLQNSLIDMYSKCGNLTYSRRIFDTMQ----ERTVMSWNAMLVGYGKHGEG 370
+ V SY + L+D + K G + + + + M + + +N ++ + K
Sbjct: 420 CKPNVYSYTI----LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 371 REVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFYDMTSGKIGVEPKKEHY 430
E +E+F M + KPD T +++SG L + DM S GV Y
Sbjct: 476 PEAVEIFREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE--GVVANTVTY 532
Query: 431 GCVVDLLGRAGRVEEAFEFIKKMPFE 456
+++ R G ++EA + + +M F+
Sbjct: 533 NTLINAFLRRGEIKEARKLVNEMVFQ 558
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 16/219 (7%)
Query: 96 GYNALLNECVSKRALREGQRVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLRDA----RHV 151
G+N L++ + + E + M + P V+ LI + D ++ A R +
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 152 FDEMPERNVVSWTAMISAYSQRGYASQALNLFVQMLRSGTEPNEFTFATVXSMLGR---- 207
E N V++ +I+A+ +RG +A L +M+ G+ +E T+ ++ L R
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 208 -QIHSLIIKSNYDAHVYVGSS---LLDMYAKDGKIHEARGIFECLPER----DVVSCTAI 259
+ SL K D H S L++ + G + EA + + R D+V+ ++
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 260 ISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTAL 298
I+G + G E+ L +FR+L+ EG+ + VT+ ++++ L
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 124/302 (41%), Gaps = 37/302 (12%)
Query: 179 ALNLFVQMLRSGTEPNEFTFATVXSMLGRQIHSLIIKSNYDAHVYVGSSLLDMYAKDGKI 238
A N+F ML P FTF V + + + D+ + SLL K G
Sbjct: 201 AANVFYDMLSRKIPPTLFTFGVV-------MKAFCAVNEIDSAL----SLLRDMTKHG-- 247
Query: 239 HEARGIFECLPERDVVSCTAIISGYAQLGLDEEALDLFRQLRGEGMQSNYVTYASVLTAL 298
C+P + V +I ++ EAL L ++ G + T+ V+ L
Sbjct: 248 --------CVP--NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 299 SGLASLDHG-KQVHNHVLRSEVP---SYVVLQNSLIDMYSKCGNLTYSRRIFDTMQERTV 354
++ K V+ ++R P +Y L N L K G + ++ +F + + +
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL----CKIGRVDAAKDLFYRIPKPEI 353
Query: 355 MSWNAMLVGYGKHGEGREVLELFTLMREENEVKPDGVTMLAVLSGCSHGGLEDRGLDIFY 414
+ +N ++ G+ HG + + + M + PD T +++ G GL L++ +
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 415 DMTSGKIGVEPKKEHYGCVVDLLGRAGRVEEAFEFIKKMP---FEPTAAIWGSLLGA-CS 470
DM + G +P Y +VD + G+++EA+ + +M +P + L+ A C
Sbjct: 414 DMRNK--GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 471 VH 472
H
Sbjct: 472 EH 473