Miyakogusa Predicted Gene
- Lj0g3v0262149.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0262149.1 Non Chatacterized Hit- tr|F6I6N4|F6I6N4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,27.13,4e-18,PPR,Pentatricopeptide repeat; PENTATRICOPEPTIDE (PPR)
REPEAT-CONTAINING PROTEIN,NULL; FAMILY NOT NAM,CUFF.17254.1
(630 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 370 e-102
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 370 e-102
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 366 e-101
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 366 e-101
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 352 4e-97
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 348 7e-96
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 348 8e-96
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 348 9e-96
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 8e-95
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 343 3e-94
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 1e-93
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 338 8e-93
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 1e-91
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 3e-91
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 332 6e-91
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 8e-91
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 2e-90
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 6e-89
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 2e-88
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 323 3e-88
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 5e-88
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 318 6e-87
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 316 3e-86
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 6e-86
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 5e-85
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 311 8e-85
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 5e-84
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 4e-82
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 6e-82
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 6e-82
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 7e-82
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 301 9e-82
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 301 1e-81
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 300 2e-81
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 299 3e-81
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 299 4e-81
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 297 1e-80
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 3e-80
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 4e-80
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 295 5e-80
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 9e-80
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 2e-79
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 292 6e-79
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 1e-78
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 291 1e-78
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 289 5e-78
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 8e-78
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 1e-77
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 285 1e-76
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 6e-76
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 7e-76
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 279 5e-75
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 279 5e-75
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 7e-75
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 278 9e-75
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 278 9e-75
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 5e-74
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 270 2e-72
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 268 7e-72
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 6e-71
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 264 1e-70
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 2e-70
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 7e-70
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 261 1e-69
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 5e-69
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 258 6e-69
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 7e-69
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 7e-69
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 4e-68
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 6e-68
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 254 9e-68
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 9e-68
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 254 1e-67
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 2e-67
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 8e-67
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 249 4e-66
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 9e-66
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 1e-65
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 244 2e-64
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 2e-64
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 2e-64
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 9e-64
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 240 2e-63
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 239 4e-63
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 239 6e-63
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 7e-63
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 4e-62
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 9e-62
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 234 1e-61
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 234 1e-61
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 233 4e-61
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 7e-61
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 2e-59
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 226 3e-59
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 2e-58
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 3e-58
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 5e-58
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 219 4e-57
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 5e-57
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 9e-57
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 1e-56
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 217 2e-56
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 216 4e-56
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 8e-56
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 6e-55
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 5e-54
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 7e-54
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 8e-54
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 8e-54
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 203 3e-52
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 6e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 2e-48
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 9e-45
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 175 1e-43
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 4e-41
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 6e-39
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 137 2e-32
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 105 7e-23
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 101 2e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 3e-20
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 5e-19
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 6e-19
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 92 1e-18
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 89 1e-17
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 85 1e-16
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 1e-15
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 6e-15
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 6e-14
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 5e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 73 5e-13
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 8e-13
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 2e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 70 3e-12
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 70 4e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 70 6e-12
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 6e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 7e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 69 9e-12
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 65 2e-10
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 62 1e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 58 2e-08
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 58 2e-08
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 2e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 8e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 55 1e-07
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 54 4e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 7e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 53 8e-07
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 1e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 7e-06
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 49 8e-06
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 370 bits (951), Expect = e-102, Method: Compositional matrix adjust.
Identities = 208/612 (33%), Positives = 345/612 (56%), Gaps = 9/612 (1%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN+ + G F ++ FKKM GV D++TF V+++ SS+R+ G+ H
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRS-VHGGEQLHGFI 221
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
++ G N+++ FY+K + AR+VFD M RDV+SW S+I GY+S
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 131 DLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY 189
+F +M V +E + T++ + C S +++G +H VK+ + N++L MY
Sbjct: 282 SVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMY 341
Query: 190 ADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETL 249
+ G + + +F E++ R V S+ +I+ Y+ G L EM+ EG S ++ T+
Sbjct: 342 SKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEE-EGISPDVYTV 400
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHF 308
T V++ A+ L +G+ VH + + D+ + +L+D YAKCG + + +F E+
Sbjct: 401 TAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRV 460
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE-IWRNLLDACANLGALKLGRV 367
K I+ ++ G+ +N EA++LF + E E +L ACA+L A GR
Sbjct: 461 KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGRE 520
Query: 368 VHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFG 427
+HGY+M+N + + H+ S+++MY + G + A +FD + KD+++WT MI G+G
Sbjct: 521 IHGYIMRNGYFS----DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 428 SHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPAL 487
HGFG EA+ FN M + ++ + ++F+SLL ACSHSGLV EG + + M+ IEP +
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636
Query: 488 DHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE 547
+H+ C+VD+ R G + +A I M I PD+ IWGALL ++ + L E A+++ E
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696
Query: 548 LEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDI 607
LEP+N GY+ L++N+ A A +W +V+ LR+ + ++ L+K PG S IE+KG F++GD
Sbjct: 697 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 756
Query: 608 THPEAEEIYAAL 619
++PE E I A L
Sbjct: 757 SNPETENIEAFL 768
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 246/485 (50%), Gaps = 30/485 (6%)
Query: 89 YVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTL 147
Y C + A RVFD + + W ++ S + LF KM +E +S T
Sbjct: 139 YTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTF 198
Query: 148 IVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINK 207
+ ++ + ++ G Q+HG+ +KSG SV NS++ Y + +F E+ +
Sbjct: 199 SCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTE 258
Query: 208 RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE-TLTLVISAFAKCGN---LS 263
RDV SWN +I+ Y V + + GL +Q L IE L ++S FA C + +S
Sbjct: 259 RDVISWNSIINGY--VSNGLAEKGLSVFVQMLVS---GIEIDLATIVSVFAGCADSRLIS 313
Query: 264 KGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFI 322
G VH + +K FS +D +LLD Y+KCG LD + +FRE+ +S ++ +M++G+
Sbjct: 314 LGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYA 373
Query: 323 QNGSFMEAIALFQQMQAEDLVIVPEIW--RNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
+ G EA+ LF++M+ E I P+++ +L+ CA L G+ VH ++ +N
Sbjct: 374 REGLAGEAVKLFEEMEEEG--ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN----D 427
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFN 440
+ ++ + ++++MY + G++ A VF M VKD+I+W ++I G+ + + EAL FN
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 441 LMMEH-RMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTC--MVDL 496
L++E R P+ T +L AC+ +G +I+ Y M+ G+ D H +VD+
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY----FSDRHVANSLVDM 543
Query: 497 FGRCGMVKEALSIILKMVILPDSRIWGALLAASGV--YGNKTLGEYTAQRLLELEPDNAG 554
+ +CG + A ++ + D W ++A G+ +G + + + R +E D
Sbjct: 544 YAKCGALLLA-HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS 602
Query: 555 YHTLL 559
+ +LL
Sbjct: 603 FVSLL 607
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 207/405 (51%), Gaps = 18/405 (4%)
Query: 139 ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEV 198
+++P TL +LQ C S L G ++ + +G ++D ++ + + MY + G +E
Sbjct: 91 DIDPR--TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 199 ELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAK 258
+F E+ WNIL++ + GD GL +M S G + T + V +F+
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMS-SGVEMDSYTFSCVSKSFSS 207
Query: 259 CGNLSKGEGVHCLVIKTGFSD-DVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
++ GE +H ++K+GF + + + SL+ FY K ++D + ++F E+ + I+ ++
Sbjct: 208 LRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 318 MSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLF 377
++G++ NG + +++F QM + I ++ CA+ + LGR VH +K F
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK 437
+ ++L+MY + G++ SA+AVF M + V+++TSMI G+ G EA+K
Sbjct: 328 SRED----RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVK 383
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK---WGFGIEPALDHHTCMV 494
F M E + P+ T ++L+ C+ L+ EG +++ +K GF I + ++
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVS----NALM 439
Query: 495 DLFGRCGMVKEALSIILKMVILPDSRIWGALLA--ASGVYGNKTL 537
D++ +CG ++EA + +M + D W ++ + Y N+ L
Sbjct: 440 DMYAKCGSMQEAELVFSEMRV-KDIISWNTIIGGYSKNCYANEAL 483
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/611 (33%), Positives = 343/611 (56%), Gaps = 8/611 (1%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
++ ++ + AL F +MR V + F + + A+ GK H +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGD-EAELRVGKEIHGLL 161
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
++ G LDL+ + + Y KC + AR+VFD M RD+VSW +++AGY +A
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 131 DLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY 189
++ M E L+P+ +T++ +L A A ++VG +IHGYA++SG ++ +++ MY
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 190 ADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETL 249
A GS E LF + +R+V SWN +I Y + + + A LI + EG ++
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAY-VQNENPKEAMLIFQKMLDEGVKPTDVSV 340
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHF 308
+ A A G+L +G +H L ++ G +V + SL+ Y KC ++D + +F ++
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVV 368
++ ++ AM+ GF QNG ++A+ F QM++ + + +++ A A L + +
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWI 460
Query: 369 HGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGS 428
HG +M++ ++ N+ + T++++MY + G I AR +FD M + V W +MI+G+G+
Sbjct: 461 HGVVMRSC----LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 429 HGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALD 488
HGFG AL+ F M + ++PN VTFLS++SACSHSGLV G K +Y MK + IE ++D
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMD 576
Query: 489 HHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLEL 548
H+ MVDL GR G + EA I++M + P ++GA+L A ++ N E A+RL EL
Sbjct: 577 HYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFEL 636
Query: 549 EPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDIT 608
PD+ GYH LL+N+ +A W +V ++R M + L+K PG S +E+K + F SG
Sbjct: 637 NPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTA 696
Query: 609 HPEAEEIYAAL 619
HP++++IYA L
Sbjct: 697 HPDSKKIYAFL 707
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 236/468 (50%), Gaps = 21/468 (4%)
Query: 74 GLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLF 133
GL + +F ++ + + + A RVF+ + + V + +M+ G+ + A F
Sbjct: 64 GLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFF 123
Query: 134 NKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADK 192
+MR ++EP +L+ C L VG +IHG VKSG +D + MYA
Sbjct: 124 VRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKC 183
Query: 193 GSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLV 252
E +F + +RD+ SWN +++ YS G M R+A + + E + T+ V
Sbjct: 184 RQVNEARKVFDRMPERDLVSWNTIVAGYSQNG-MARMALEMVKSMCEENLKPSFITIVSV 242
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSY 311
+ A + +S G+ +H +++GF V + T+L+D YAKCG L+ + QLF + ++
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNV 302
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
++ +M+ ++QN + EA+ +FQ+M E + L ACA+LG L+ GR +H
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH-- 360
Query: 372 LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGF 431
K ++ N+ + S+++MY + + +A ++F ++ + +++W +MI GF +G
Sbjct: 361 --KLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 432 GFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGI--EPALDH 489
+AL YF+ M ++P++ T++S+++A + I + KW G+ LD
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAE-------LSITHHAKWIHGVVMRSCLDK 471
Query: 490 H----TCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
+ T +VD++ +CG + A +I M+ W A++ G +G
Sbjct: 472 NVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTHG 518
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 157/335 (46%), Gaps = 14/335 (4%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGV-PHDTFTFPVVNRALSSMRADAVYGKM 65
N ++WN I +V A+ F+KM GV P D ++ A + + D G+
Sbjct: 301 NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALH-ACADL-GDLERGRF 358
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H +++++GLD ++ N++I Y KC + A +F + R +VSW +MI G+
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A + F++MR ++P++ T + ++ A + + IHG ++S + + V +
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
++ MYA G+ L+F +++R V +WN +I Y G L EMQ
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCL-VIKTGFSDDVLQT---SLLDFYAKCGKLDISV 300
+ L+ VISA + G + G+ C ++K +S ++ +++D + G+L+ +
Sbjct: 539 GVTFLS-VISACSHSGLVEA--GLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAW 595
Query: 301 QLFREIHFKSYITLGAMMSGFIQ---NGSFMEAIA 332
++ K + + M G Q N +F E A
Sbjct: 596 DFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/623 (34%), Positives = 343/623 (55%), Gaps = 16/623 (2%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKK-MRQMGVPHDTFTFPVVNRALSSMRADAVY 62
+ + AWNL I + G + F M G+ D TFP V +A ++ +
Sbjct: 113 QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTV----ID 168
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G HC+A++ G D+Y ++I Y + +G AR +FD M RD+ SW +MI+GY
Sbjct: 169 GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQ 228
Query: 123 ERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
+ A L N +R +SVT++ +L AC + N G IH Y++K G+ + V
Sbjct: 229 SGNAKEALTLSNGLRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
N ++ +YA+ G + + +F + RD+ SWN +I Y + +R L EM+ L
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMR-LSRI 344
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF--SDDVLQTSLLDFYAKCGKLDISV 300
+ TL + S ++ G++ V ++ G+ D + +++ YAK G +D +
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE-IWRNLLDACANL 359
+F + I+ ++SG+ QNG EAI ++ M+ E + + W ++L AC+
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
GAL+ G +HG L+KN + ++ + TS+ +MY + G + A ++F ++P + + W
Sbjct: 465 GALRQGMKLHGRLLKN----GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPW 520
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKW 479
++I G HG G +A+ F M++ ++P+ +TF++LLSACSHSGLV EG + M+
Sbjct: 521 NTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQT 580
Query: 480 GFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGE 539
+GI P+L H+ CMVD++GR G ++ AL I M + PD+ IWGALL+A V+GN LG+
Sbjct: 581 DYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGK 640
Query: 540 YTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVS 599
++ L E+EP++ GYH LLSN+ ASAG+W V+E+R K L+K PGWS +EV
Sbjct: 641 IASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKV 700
Query: 600 YGFLSGDITHPEAEEIYAALCTL 622
F +G+ THP EE+Y L L
Sbjct: 701 EVFYTGNQTHPMYEEMYRELTAL 723
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 136/496 (27%), Positives = 261/496 (52%), Gaps = 25/496 (5%)
Query: 85 MIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVS--VACDLFNKMRVELEP 142
+++ Y + AR FD + +RDV +W MI+GY + S + C + L P
Sbjct: 92 LVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTP 151
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
+ T +L+AC T ++ G +IH A+K G + D V S++ +Y+ + +LF
Sbjct: 152 DYRTFPSVLKAC--RTVID-GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 203 SEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNL 262
E+ RD+ SWN +IS Y G+ L N +++++ T+ ++SA + G+
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDS-----VTVVSLLSACTEAGDF 263
Query: 263 SKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGF 321
++G +H IK G ++ + L+D YA+ G+L ++F ++ + I+ +++ +
Sbjct: 264 NRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 322 IQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPV 381
N + AI+LFQ+M+ + +L + LG ++ R V G+ ++ G
Sbjct: 324 ELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLR---KGWF 380
Query: 382 EGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNL 441
++ + +++ MY + G + SARAVF+ +P DVI+W ++I G+ +GF EA++ +N+
Sbjct: 381 LEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNI 440
Query: 442 MMEH-RMQPNSVTFLSLLSACSHSGLVSEGCKIYYS-MKWGFGIEPALDHHTCMVDLFGR 499
M E + N T++S+L ACS +G + +G K++ +K G ++ + T + D++G+
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVV--TSLADMYGK 498
Query: 500 CGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE--LEPDNAGYHT 557
CG +++ALS+ ++ + +S W L+A G +G+ + +L+ ++PD+ + T
Sbjct: 499 CGRLEDALSLFYQIPRV-NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 557
Query: 558 LLSNVKASA----GRW 569
LLS S G+W
Sbjct: 558 LLSACSHSGLVDEGQW 573
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 170/355 (47%), Gaps = 16/355 (4%)
Query: 158 TPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILI 217
T L +H V S + + + ++ +Y G+ F I RDV +WN++I
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 218 SFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF 277
S Y G+ V + G + + T V+ A C + G +HCL +K GF
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA---CRTVIDGNKIHCLALKFGF 181
Query: 278 SDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQ 336
DV + SL+ Y++ + + LF E+ + + AM+SG+ Q+G+ EA+ L
Sbjct: 182 MWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG 241
Query: 337 MQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYI 396
++A D V V +LL AC G G +H Y +K+ +E L + ++++Y
Sbjct: 242 LRAMDSVTVV----SLLSACTEAGDFNRGVTIHSYSIKH----GLESELFVSNKLIDLYA 293
Query: 397 RGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLS 456
G + + VFDRM V+D+I+W S+I+ + + A+ F M R+QP+ +T +S
Sbjct: 294 EFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLIS 353
Query: 457 LLSACSHSGLVSEGCKIY--YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSI 509
L S S G + C+ ++++ G+ +E + +V ++ + G+V A ++
Sbjct: 354 LASILSQLGDI-RACRSVQGFTLRKGWFLEDITIGNAVVV-MYAKLGLVDSARAV 406
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 8/153 (5%)
Query: 384 NLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNL-M 442
N+ + ++N+Y GN++ AR FD + +DV AW MI G+G G E ++ F+L M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCG 501
+ + P+ TF S+L AC V +G KI+ ++K+GF + + ++ L+ R
Sbjct: 145 LSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFMWDVYVA--ASLIHLYSRYK 199
Query: 502 MVKEALSIILKMVILPDSRIWGALLAASGVYGN 534
V A I+ + + D W A+++ GN
Sbjct: 200 AVGNA-RILFDEMPVRDMGSWNAMISGYCQSGN 231
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 225/672 (33%), Positives = 356/672 (52%), Gaps = 60/672 (8%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRA---LSSMRADAVYGKMTH 67
WN IR++ D G + L F M + D +TFP V +A +SS+R G+ H
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC----GESAH 150
Query: 68 CVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVS 127
+++ G +++ N ++ Y +C + AR+VFD M DVVSW S+I Y
Sbjct: 151 ALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPK 210
Query: 128 VACDLFNKMRVEL--EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
VA ++F++M E P+++TL+ +L C + ++G Q+H +AV S ++ + V N +
Sbjct: 211 VALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCL 270
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ-------- 237
+ MYA G +E +FS ++ +DV SWN +++ YS +G L +MQ
Sbjct: 271 VDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDV 330
Query: 238 -----SLEGHSW---------------------NIETLTLVISAFAKCGNLSKGEGVHCL 271
++ G++ N TL V+S A G L G+ +HC
Sbjct: 331 VTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCY 390
Query: 272 VIK-------TGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHFK--SYITLGAMMSGF 321
IK G D+ ++ L+D YAKC K+D + +F + K +T M+ G+
Sbjct: 391 AIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGY 450
Query: 322 IQNGSFMEAIALFQQMQAEDLVIVPEIW--RNLLDACANLGALKLGRVVHGYLMKNLFNG 379
Q+G +A+ L +M ED P + L ACA+L AL++G+ +H Y ++N N
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 380 PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYF 439
L + +++MY + G+IS AR VFD M K+ + WTS++ G+G HG+G EAL F
Sbjct: 511 V---PLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIF 567
Query: 440 NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGR 499
+ M + + VT L +L ACSHSG++ +G + + MK FG+ P +H+ C+VDL GR
Sbjct: 568 DEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGR 627
Query: 500 CGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLL 559
G + AL +I +M + P +W A L+ ++G LGEY A+++ EL ++ G +TLL
Sbjct: 628 AGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLL 687
Query: 560 SNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIE-VKGVSYGFLSGDITHPEAEEIYAA 618
SN+ A+AGRW +V +R M K +KK+PG S +E +KG + F GD THP A+EIY
Sbjct: 688 SNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTT-TFFVGDKTHPHAKEIYQV 746
Query: 619 LCTLSRVTQDFG 630
L + +D G
Sbjct: 747 LLDHMQRIKDIG 758
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 215/474 (45%), Gaps = 54/474 (11%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKM-RQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+ ++WN I ++ LG+ AL F +M + G D T V +S+ ++ GK
Sbjct: 192 DVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSL-GKQ 250
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
HC A+ + +++ N ++D Y KC + A VF M +DVVSW +M+AGY
Sbjct: 251 LHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGR 310
Query: 126 VSVACDLFNKMRVE------------------------------------LEPNSVTLIV 149
A LF KM+ E ++PN VTLI
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWS-------VKNSVLRMYADKGSTEEVELLF 202
+L C + L G +IH YA+K + + + V N ++ MYA + +F
Sbjct: 371 VLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMF 430
Query: 203 SEIN--KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW-NIETLTLVISAFAKC 259
++ +RDV +W ++I YS GD + L++EM + + N T++ + A A
Sbjct: 431 DSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASL 490
Query: 260 GNLSKGEGVHCLVIKTGFSDDVLQTS--LLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
L G+ +H ++ + L S L+D YAKCG + + +F + K+ +T ++
Sbjct: 491 AALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSL 550
Query: 318 MSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLF 377
M+G+ +G EA+ +F +M+ + +L AC++ G + G + + MK +F
Sbjct: 551 MTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG-MEYFNRMKTVF 609
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGSHG 430
G G H ++++ R G +++A + + MP++ + W + + HG
Sbjct: 610 -GVSPGPEHY-ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 201/618 (32%), Positives = 345/618 (55%), Gaps = 12/618 (1%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN+ I+ G + A+ + +M GV DTFT+P V ++++ + + GK H +
Sbjct: 98 WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGI-SSLEEGKKIHAMV 156
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
I++G D+Y CN++I Y+K C A +VF+ M RD+VSW SMI+GY++ +
Sbjct: 157 IKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSL 216
Query: 131 DLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM-DWSVKNSVLRM 188
LF +M + +P+ + + L AC +G +IH +AV+S + D V S+L M
Sbjct: 217 MLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDM 276
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
Y+ G E +F+ + +R++ +WN++I Y+ G + +M G ++ T
Sbjct: 277 YSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT 336
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIH 307
++ A A + +G +H ++ GF VL+T+L+D Y +CG+L + +F +
Sbjct: 337 SINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 308 FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRV 367
K+ I+ ++++ ++QNG A+ LFQ++ LV ++L A A +L GR
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGRE 452
Query: 368 VHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFG 427
+H Y++K+ + N + S+++MY G++ AR F+ + +KDV++W S+I +
Sbjct: 453 IHAYIVKSRY----WSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYA 508
Query: 428 SHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPAL 487
HGFG ++ F+ M+ R+ PN TF SLL+ACS SG+V EG + + SMK +GI+P +
Sbjct: 509 VHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGI 568
Query: 488 DHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE 547
+H+ CM+DL GR G A + +M +P +RIWG+LL AS + + T+ E+ A+++ +
Sbjct: 569 EHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFK 628
Query: 548 LEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDI 607
+E DN G + LL N+ A AGRW +V ++ M K + + S +E KG S+ F +GD
Sbjct: 629 MEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDR 688
Query: 608 THPEAEEIYAALCTLSRV 625
+H +IY L +SR+
Sbjct: 689 SHVATNKIYEVLDVVSRM 706
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 216/436 (49%), Gaps = 19/436 (4%)
Query: 2 EEEP-NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
EE P + ++WN I ++ LG S+L FK+M + G D F+ A S + +
Sbjct: 189 EEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPK 248
Query: 61 VYGKMTHCVAIQMGLDL-DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
+ GK HC A++ ++ D+ +++D Y K + A R+F+ M+ R++V+W MI
Sbjct: 249 M-GKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 120 YISERHVSVACDLFNKMRVE--LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM 177
Y V+ A F KM + L+P+ +T I +L A + + G IHGYA++ G L
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLP 363
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM- 236
++ +++ MY + G + E++F + +++V SWN +I+ Y G L E+
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW 423
Query: 237 -QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCG 294
SL S T+ ++ A+A+ +LS+G +H ++K+ + S+ ++ SL+ YA CG
Sbjct: 424 DSSLVPDS---TTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCG 480
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
L+ + + F I K ++ +++ + +G ++ LF +M A + + +LL
Sbjct: 481 DLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLA 540
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP-V 413
AC+ G + G + + ++ + +L++ R GN S+A+ + MP V
Sbjct: 541 ACSISGMVDEGWEYFESMKREY---GIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFV 597
Query: 414 KDVIAWTSMIEGFGSH 429
W S++ +H
Sbjct: 598 PTARIWGSLLNASRNH 613
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 106/385 (27%), Positives = 195/385 (50%), Gaps = 28/385 (7%)
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
LR +AD E+ LF E+NK D WN++I ++ G + + M G +
Sbjct: 71 LRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VFAGVKAD 129
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFR 304
T VI + A +L +G+ +H +VIK GF DV + SL+ Y K G + ++F
Sbjct: 130 TFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFE 189
Query: 305 EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL--LDACANLGAL 362
E+ + ++ +M+SG++ G ++ LF++M P+ + + L AC+++ +
Sbjct: 190 EMPERDIVSWNSMISGYLALGDGFSSLMLFKEML--KCGFKPDRFSTMSALGACSHVYSP 247
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
K+G+ +H + +++ G++ + TSIL+MY + G +S A +F+ M ++++AW M
Sbjct: 248 KMGKEIHCHAVRSRIE---TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 423 IEGFGSHGFGFEALKYFNLMMEHR-MQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWG 480
I + +G +A F M E +QP+ +T ++LL A + + EG I+ Y+M+ G
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRG 360
Query: 481 FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEY 540
F P + T ++D++G CG +K A +I + + W +++AA G Y
Sbjct: 361 F--LPHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWNSIIAAYVQNGKN----Y 413
Query: 541 TAQRLLE------LEPDNAGYHTLL 559
+A L + L PD+ ++L
Sbjct: 414 SALELFQELWDSSLVPDSTTIASIL 438
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 129/276 (46%), Gaps = 8/276 (2%)
Query: 279 DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ 338
+D T L +A ++ ++QLF E++ M+ GF G ++EA+ + +M
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 339 AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRG 398
+ + ++ + A + +L+ G+ +H ++K F V ++ S++++Y++
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDV----YVCNSLISLYMKL 178
Query: 399 GNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLL 458
G A VF+ MP +D+++W SMI G+ + G GF +L F M++ +P+ + +S L
Sbjct: 179 GCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSAL 238
Query: 459 SACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPD 518
ACSH G +I+ + T ++D++ + G V A I M I +
Sbjct: 239 GACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRN 297
Query: 519 SRIWGALLAASGVYGNKTLGEYTAQRLLE---LEPD 551
W ++ G T Q++ E L+PD
Sbjct: 298 IVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPD 333
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 348 bits (893), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 208/612 (33%), Positives = 325/612 (53%), Gaps = 17/612 (2%)
Query: 25 HSALSTFKKMRQ-MGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCN 83
HS+LS F +R+ + ++ T+ A S R D G++ H A+ G D +L +
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA-GRVIHGQAVVDGCDSELLLGS 158
Query: 84 TMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER----HVSVACDLFNKMRVE 139
++ Y K W + AR+VFD M +D + W +MI+GY + V DL N+
Sbjct: 159 NIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTR 218
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
L ++ TL+ +L A L +G QIH A K+G V + +Y+ G +
Sbjct: 219 L--DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGS 276
Query: 200 LLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKC 259
LF E K D+ ++N +I Y+ G+ L E+ L G TL +S
Sbjct: 277 ALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-LSGARLRSSTL---VSLVPVS 332
Query: 260 GNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
G+L +H +K+ F S + T+L Y+K +++ + +LF E KS + AM+
Sbjct: 333 GHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMI 392
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFN 378
SG+ QNG +AI+LF++MQ + P +L ACA LGAL LG+ VH + F
Sbjct: 393 SGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDF- 451
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKY 438
E ++++ T+++ MY + G+I+ AR +FD M K+ + W +MI G+G HG G EAL
Sbjct: 452 ---ESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNI 508
Query: 439 FNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFG 498
F M+ + P VTFL +L ACSH+GLV EG +I+ SM +G EP++ H+ CMVD+ G
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568
Query: 499 RCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTL 558
R G ++ AL I M I P S +W LL A ++ + L +++L EL+PDN GYH L
Sbjct: 569 RAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVL 628
Query: 559 LSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAA 618
LSN+ ++ + + +R+ ++ L K PG++ IE+ + F SGD +HP+ +EIY
Sbjct: 629 LSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEK 688
Query: 619 LCTLSRVTQDFG 630
L L ++ G
Sbjct: 689 LEKLEGKMREAG 700
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 348 bits (892), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 211/655 (32%), Positives = 350/655 (53%), Gaps = 41/655 (6%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
+N IR + G + A+ F +M G+ D +TFP A + RA G H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG-NGIQIHGLI 160
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
++MG DL+ N+++ FY +C + AR+VFD M R+VVSWTSMI GY A
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 131 DLFNKM--RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
DLF +M E+ PNSVT++ ++ AC L G +++ + SG+ ++ + ++++ M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
Y + + + LF E ++ N + S Y G G+ N M I
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSD-DVLQTSLLDFYAKCGKLDISVQLFREIH 307
L+ IS+ ++ N+ G+ H V++ GF D + +L+D Y KC + D + ++F +
Sbjct: 341 LS-AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 308 FKSYITLGAMMSGFIQNGS-------------------------------FMEAIALFQQ 336
K+ +T ++++G+++NG F EAI +F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 337 MQAEDLVIVPEI-WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMY 395
MQ+++ V + ++ AC +LGAL L + ++ Y+ KN ++ ++ + T++++M+
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN----GIQLDVRLGTTLVDMF 515
Query: 396 IRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFL 455
R G+ SA ++F+ + +DV AWT+ I G A++ F+ M+E ++P+ V F+
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 456 SLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVI 515
L+ACSH GLV +G +I+YSM G+ P H+ CMVDL GR G+++EA+ +I M +
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 516 LPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEEL 575
P+ IW +LLAA V GN + Y A+++ L P+ G + LLSNV ASAGRWN++ ++
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695
Query: 576 RREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
R M EK L+K PG S I+++G ++ F SGD +HPE I A L +S+ G
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLG 750
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 348 bits (892), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 211/655 (32%), Positives = 350/655 (53%), Gaps = 41/655 (6%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
+N IR + G + A+ F +M G+ D +TFP A + RA G H +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKG-NGIQIHGLI 160
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
++MG DL+ N+++ FY +C + AR+VFD M R+VVSWTSMI GY A
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 131 DLFNKM--RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
DLF +M E+ PNSVT++ ++ AC L G +++ + SG+ ++ + ++++ M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
Y + + + LF E ++ N + S Y G G+ N M I
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSD-DVLQTSLLDFYAKCGKLDISVQLFREIH 307
L+ IS+ ++ N+ G+ H V++ GF D + +L+D Y KC + D + ++F +
Sbjct: 341 LS-AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 308 FKSYITLGAMMSGFIQNGS-------------------------------FMEAIALFQQ 336
K+ +T ++++G+++NG F EAI +F
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCS 459
Query: 337 MQAEDLVIVPEI-WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMY 395
MQ+++ V + ++ AC +LGAL L + ++ Y+ KN ++ ++ + T++++M+
Sbjct: 460 MQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN----GIQLDVRLGTTLVDMF 515
Query: 396 IRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFL 455
R G+ SA ++F+ + +DV AWT+ I G A++ F+ M+E ++P+ V F+
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFV 575
Query: 456 SLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVI 515
L+ACSH GLV +G +I+YSM G+ P H+ CMVDL GR G+++EA+ +I M +
Sbjct: 576 GALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPM 635
Query: 516 LPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEEL 575
P+ IW +LLAA V GN + Y A+++ L P+ G + LLSNV ASAGRWN++ ++
Sbjct: 636 EPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKV 695
Query: 576 RREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
R M EK L+K PG S I+++G ++ F SGD +HPE I A L +S+ G
Sbjct: 696 RLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLG 750
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 207/618 (33%), Positives = 336/618 (54%), Gaps = 12/618 (1%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTH-CV 69
WN +++ Q+ L F M + D FT PV +A +R + YG+M H V
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELR-EVNYGEMIHGFV 86
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA 129
+ L DLY +++I Y+KC + A R+FD + D+V+W+SM++G+ A
Sbjct: 87 KKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQA 146
Query: 130 CDLFNKMRV--ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLR 187
+ F +M + ++ P+ VTLI ++ AC + +G +HG+ ++ G D S+ NS+L
Sbjct: 147 VEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLN 206
Query: 188 MYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
YA + +E LF I ++DV SW+ +I+ Y G + N+M +G N+
Sbjct: 207 CYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMD-DGTEPNVA 265
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREI 306
T+ V+ A A +L +G H L I+ G +V + T+L+D Y KC + + +F I
Sbjct: 266 TVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRI 325
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR-NLLDACANLGALKLG 365
K ++ A++SGF NG +I F M E+ I +L +C+ LG L+
Sbjct: 326 PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA 385
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
+ H Y++K F+ N + S++ +Y R G++ +A VF+ + +KD + WTS+I G
Sbjct: 386 KCFHSYVIKYGFDS----NPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 426 FGSHGFGFEALKYFNLMMEH-RMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
+G HG G +AL+ FN M++ ++PN VTFLS+LSACSH+GL+ EG +I+ M + +
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
P L+H+ +VDL GR G + A+ I +M P +I G LL A ++ N + E A++
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 561
Query: 545 LLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLS 604
L ELE ++AGY+ L+SNV G W VE+LR + ++ +KK S IE++ + F++
Sbjct: 562 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVA 621
Query: 605 GDITHPEAEEIYAALCTL 622
D HPE E +Y L L
Sbjct: 622 DDELHPEKEPVYGLLKEL 639
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/441 (26%), Positives = 208/441 (47%), Gaps = 30/441 (6%)
Query: 194 STEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVI 253
S+ + +F E+ KR + WN L+ S V + M E N TL + +
Sbjct: 9 SSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNF-TLPVAL 67
Query: 254 SAFAKCGNLSKGEGVHCLVIK--TGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSY 311
A + ++ GE +H V K T SD + +SL+ Y KCG++ ++++F E+
Sbjct: 68 KACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDI 127
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQM-QAEDLVIVPEIWRNLLDACANLGALKLGRVVHG 370
+T +M+SGF +NGS +A+ F++M A D+ L+ AC L +LGR VHG
Sbjct: 128 VTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHG 187
Query: 371 YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHG 430
++++ F+ +L + S+LN Y + A +F + KDVI+W+++I + +G
Sbjct: 188 FVIRRGFS----NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 431 FGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH 490
EAL FN MM+ +PN T L +L AC+ + + +G K + + G+E +
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKT-HELAIRKGLETEVKVS 302
Query: 491 TCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG--NKTLGEYTAQRLLEL 548
T +VD++ +C +EA ++ + + D W AL++ + G ++++ E++ ++ L
Sbjct: 303 TALVDMYMKCFSPEEAYAVFSR-IPRKDVVSWVALISGFTLNGMAHRSIEEFS---IMLL 358
Query: 549 EPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDIT 608
E + L+ V S +E+ + C + YGF S
Sbjct: 359 ENNTRPDAILMVKVLGSCSELGFLEQAK---------------CFHSYVIKYGFDSNPFI 403
Query: 609 HPEAEEIYAALCTLSRVTQDF 629
E+Y+ +L ++ F
Sbjct: 404 GASLVELYSRCGSLGNASKVF 424
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 205/622 (32%), Positives = 338/622 (54%), Gaps = 24/622 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMG-VPHDTFTFPVVNRALSSMRADAVYGKM 65
N +WN+ + + G F A+ + +M +G V D +TFP V R + D GK
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGI-PDLARGKE 217
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H ++ G +LD+ N +I YVKC + AR +FD M RD++SW +MI+GY
Sbjct: 218 VHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGM 277
Query: 126 VSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
+LF MR + ++P+ +TL ++ AC +G IH Y + +G +D SV NS
Sbjct: 278 CHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILIS--FYSMVGDMMRVAGLINEMQSLEGH 242
+ +MY + GS E E LFS + ++D+ SW +IS Y+ + D I+ + ++
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKA-----IDTYRMMDQD 392
Query: 243 SWNIETLTL--VISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDIS 299
S + +T+ V+SA A G+L G +H L IK S ++ +L++ Y+KC +D +
Sbjct: 393 SVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA-- 357
+ +F I K+ I+ ++++G N EA+ +QM+ + + P A
Sbjct: 453 LDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMK---MTLQPNAITLTAALAACA 509
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVI 417
+GAL G+ +H ++++ V + + ++L+MY+R G +++A + F+ KDV
Sbjct: 510 RIGALMCGKEIHAHVLRT----GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVT 564
Query: 418 AWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM 477
+W ++ G+ G G ++ F+ M++ R++P+ +TF+SLL CS S +V +G +Y+S
Sbjct: 565 SWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGL-MYFSK 623
Query: 478 KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTL 537
+G+ P L H+ C+VDL GR G ++EA I KM + PD +WGALL A ++ L
Sbjct: 624 MEDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDL 683
Query: 538 GEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKG 597
GE +AQ + EL+ + GY+ LL N+ A G+W EV ++RR M E L G S +EVKG
Sbjct: 684 GELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKG 743
Query: 598 VSYGFLSGDITHPEAEEIYAAL 619
+ FLS D HP+ +EI L
Sbjct: 744 KVHAFLSDDKYHPQTKEINTVL 765
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 152/552 (27%), Positives = 257/552 (46%), Gaps = 21/552 (3%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYF 81
G+ A+ M+++ V D F + R RA G + +A+ L +
Sbjct: 73 GKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQE-EGSKVYSIALSSMSSLGVEL 131
Query: 82 CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRV--E 139
N + +V+ + A VF M R++ SW ++ GY + + A L+++M
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
++P+ T +L+ C L G ++H + V+ G +D V N+++ MY G +
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 200 LLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKC 259
LLF + +RD+ SWN +IS Y G L M+ L ++ TLT VISA
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP-DLMTLTSVISACELL 310
Query: 260 GNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
G+ G +H VI TGF+ D+ + SL Y G + +LF + K ++ M+
Sbjct: 311 GDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMI 370
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEIW-RNLLDACANLGALKLGRVVHGYLMK-NL 376
SG+ N +AI ++ M +D V EI +L ACA LG L G +H +K L
Sbjct: 371 SGYEYNFLPDKAIDTYRMMD-QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 377 FNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEAL 436
+ + N +++NMY + I A +F +P K+VI+WTS+I G + FEAL
Sbjct: 430 ISYVIVAN-----NLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 437 KYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVD 495
+ M+ +QPN++T + L+AC+ G + G +I+ + ++ G G++ L + ++D
Sbjct: 485 IFLR-QMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN--ALLD 541
Query: 496 LFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE--LEPDNA 553
++ RCG + A S D W LL G ++ R+++ + PD
Sbjct: 542 MYVRCGRMNTAWSQFNSQK--KDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEI 599
Query: 554 GYHTLLSNVKAS 565
+ +LL S
Sbjct: 600 TFISLLCGCSKS 611
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 341 bits (874), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 204/630 (32%), Positives = 334/630 (53%), Gaps = 23/630 (3%)
Query: 10 AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCV 69
AWNL IR V+ +L F++M++ G + FTFP V +A + + AD +M H
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARL-ADVGCCEMVHAH 77
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA 129
I+ D++ +D +VKC + A +VF+ M RD +W +M++G+ H A
Sbjct: 78 LIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKA 137
Query: 130 CDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
LF +MR+ E+ P+SVT++ ++Q+ L + +H ++ GV + +V N+ +
Sbjct: 138 FSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWIST 197
Query: 189 YADKGSTEEVELLFSEINK--RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
Y G + +L+F I++ R V SWN + YS+ G+ GL M E
Sbjct: 198 YGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP--- 254
Query: 247 ETLTLVISAFAKCGN---LSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQL 302
L+ I+ A C N L++G +H I G D+ + + Y+K + L
Sbjct: 255 -DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM----QAEDLVIVPEIWRNLLDACAN 358
F + ++ ++ M+SG+ + G EA+ALF M + DLV + +L+ C
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTL----LSLISGCGK 369
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
G+L+ G+ + + G N+ + ++++MY + G+I AR +FD P K V+
Sbjct: 370 FGSLETGKWIDA---RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVT 426
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
WT+MI G+ +G EALK F+ M++ +PN +TFL++L AC+HSG + +G + ++ MK
Sbjct: 427 WTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
+ I P LDH++CMVDL GR G ++EAL +I M PD+ IWGALL A ++ N +
Sbjct: 487 QVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIA 546
Query: 539 EYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGV 598
E A+ L LEP A + ++N+ A+AG W+ +R M ++++KK PG S I+V G
Sbjct: 547 EQAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGK 606
Query: 599 SYGFLSGDITHPEAEEIYAALCTLSRVTQD 628
++ F G+ H E E IY L LS +D
Sbjct: 607 NHSFTVGEHGHVENEVIYFTLNGLSLFAKD 636
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 338 bits (867), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 199/636 (31%), Positives = 348/636 (54%), Gaps = 28/636 (4%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSS--MRADAVYGK 64
N ++WN I + ++ AL F+ M V +FT V A S+ M + GK
Sbjct: 163 NQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGK 222
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H ++ G +L+ + NT++ Y K + ++ + RD+V+W ++++
Sbjct: 223 QVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNE 281
Query: 125 HVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS-VK 182
+ A + +M +E +EP+ T+ +L AC L G ++H YA+K+G L + S V
Sbjct: 282 QLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG 341
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
++++ MY + +F + R + WN +I+ YS L M+ G
Sbjct: 342 SALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGL 401
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQ 301
N T+ V+ A + G S+ E +H V+K G D +Q +L+D Y++ GK+DI+++
Sbjct: 402 LANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR 461
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ---------AEDLVIVPE--IWR 350
+F ++ + +T M++G++ + +A+ L +MQ A + + P
Sbjct: 462 IFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLM 521
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
+L +CA L AL G+ +H Y +KN + ++ + +++++MY + G + +R VFD+
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKN----NLATDVAVGSALVDMYAKCGCLQMSRKVFDQ 577
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
+P K+VI W +I +G HG G EA+ +MM ++PN VTF+S+ +ACSHSG+V EG
Sbjct: 578 IPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEG 637
Query: 471 CKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILP----DSRIWGALL 526
+I+Y MK +G+EP+ DH+ C+VDL GR G +KEA + M ++P + W +LL
Sbjct: 638 LRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQL---MNMMPRDFNKAGAWSSLL 694
Query: 527 AASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKK 586
AS ++ N +GE AQ L++LEP+ A ++ LL+N+ +SAG W++ E+RR M E+ ++K
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 754
Query: 587 KPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTL 622
+PG S IE + F++GD +HP++E++ L TL
Sbjct: 755 EPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETL 790
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 137/547 (25%), Positives = 273/547 (49%), Gaps = 36/547 (6%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
W +R+ V A+ T+ M +G+ D + FP + +A++ ++ D GK H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQ-DMELGKQIHAHV 123
Query: 71 IQMGLDLD-LYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA 129
+ G +D + NT+++ Y KC G +VFD + R+ VSW S+I+ S +A
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMA 183
Query: 130 CDLFNKMRVE-LEPNSVTLIVMLQACCASTP----LNVGTQIHGYAVKSGVLMDWSVKNS 184
+ F M E +EP+S TL+ ++ A C++ P L +G Q+H Y ++ G L + + N+
Sbjct: 184 LEAFRCMLDENVEPSSFTLVSVVTA-CSNLPMPEGLMMGKQVHAYGLRKGELNSFII-NT 241
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
++ MY G ++L RD+ +WN ++S ++ + EM LEG
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREM-VLEGVEP 300
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD--VLQTSLLDFYAKCGKLDISVQL 302
+ T++ V+ A + L G+ +H +K G D+ + ++L+D Y C ++ ++
Sbjct: 301 DEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM-QAEDLVIVPEIWRNLLDACANLGA 361
F + + AM++G+ QN EA+ LF M ++ L+ ++ AC GA
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
+HG+++K ++ + ++ ++++MY R G I A +F +M +D++ W +
Sbjct: 421 FSRKEAIHGFVVKR----GLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 422 MIEGFGSHGFGFEALKYFNLM--MEHR---------MQPNSVTFLSLLSACSHSGLVSEG 470
MI G+ +AL + M +E + ++PNS+T +++L +C+ +++G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 471 CKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI--WGALLA 527
+I+ Y++K + A+ + +VD++ +CG ++ + + + +P + W ++
Sbjct: 537 KEIHAYAIKNNLATDVAVG--SALVDMYAKCGCLQMSRKVFDQ---IPQKNVITWNVIIM 591
Query: 528 ASGVYGN 534
A G++GN
Sbjct: 592 AYGMHGN 598
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 206/632 (32%), Positives = 340/632 (53%), Gaps = 16/632 (2%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRA--DAV 61
E N + WN IR + G+ H + F M+ G D FTF + LS+ A D
Sbjct: 389 EEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL---LSTCAASHDLE 445
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
G H + I+ L +L+ N ++D Y KC + AR++F+ M RD V+W ++I Y+
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 122 SERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ + S A DLF +M + + + L L+AC L G Q+H +VK G+ D
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
+S++ MY+ G ++ +FS + + V S N LI+ YS ++ L EM +
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRG 624
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD--VLQTSLLDFYAKCGKLDI 298
+ I T ++ A K +L+ G H + K GFS + L SLL Y +
Sbjct: 625 VNPSEI-TFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTE 683
Query: 299 SVQLFREIHF-KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA 357
+ LF E+ KS + MMSG QNG + EA+ +++M+ + ++ + +L C+
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DV 416
L +L+ GR +H + F+ + + ++++MY + G++ + VFD M + +V
Sbjct: 744 VLSSLREGRAIHSLI----FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNV 799
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
++W S+I G+ +G+ +ALK F+ M + + P+ +TFL +L+ACSH+G VS+G KI+
Sbjct: 800 VSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEM 859
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
M +GIE +DH CMVDL GR G ++EA I + PD+R+W +LL A ++G+
Sbjct: 860 MIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDI 919
Query: 537 LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVK 596
GE +A++L+ELEP N+ + LLSN+ AS G W + LR+ M ++ +KK PG+S I+V+
Sbjct: 920 RGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVE 979
Query: 597 GVSYGFLSGDITHPEAEEIYAALCTLSRVTQD 628
++ F +GD +H E +I L L + +D
Sbjct: 980 QRTHIFAAGDKSHSEIGKIEMFLEDLYDLMKD 1011
Score = 179 bits (454), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 157/638 (24%), Positives = 272/638 (42%), Gaps = 84/638 (13%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTF-PVVNRALS----------- 54
NT+ W +V G A+ F++MR G D F V+N +
Sbjct: 225 NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLF 284
Query: 55 --------------------------------SMRADAV------YGKMTHCVAIQMGLD 76
+MR +V G + + I LD
Sbjct: 285 GEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD 344
Query: 77 LDL---------------YFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
L L Y ++++ Y KC + A +VF+ + ++ V W +MI GY
Sbjct: 345 LGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYA 404
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+LF M+ + T +L C AS L +G+Q H +K + +
Sbjct: 405 HNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLF 464
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V N+++ MYA G+ E+ +F + RD +WN +I Y + L M +L
Sbjct: 465 VGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRM-NLC 523
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDIS 299
G + L + A L +G+ VHCL +K G D+ +SL+D Y+KCG + +
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDA 583
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
++F + S +++ A+++G+ QN + EA+ LFQ+M + + +++AC
Sbjct: 584 RKVFSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKP 642
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV-KDVIA 418
+L LG HG + K F+ E ++ S+L MY+ ++ A A+F + K ++
Sbjct: 643 ESLTLGTQFHGQITKRGFSSEGE---YLGISLLGMYMNSRGMTEACALFSELSSPKSIVL 699
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
WT M+ G +GF EALK++ M + P+ TF+++L CS + EG I+ +
Sbjct: 700 WTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI- 758
Query: 479 WGFGIEPALDHHT--CMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLA--ASGVYGN 534
F + LD T ++D++ +CG +K + + +M + W +L+ A Y
Sbjct: 759 --FHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816
Query: 535 KTLGEYTAQRLLELEPDNAGYHTLLSNV----KASAGR 568
L + + R + PD + +L+ K S GR
Sbjct: 817 DALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGR 854
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 123/507 (24%), Positives = 239/507 (47%), Gaps = 46/507 (9%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+ AWN + + +G+ L +F + + + + FTF +V + + + +G+
Sbjct: 123 KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIV-LSTCARETNVEFGRQ 181
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
HC I+MGL+ + Y ++D Y KC I ARRVF+ ++ + V WT + +GY+
Sbjct: 182 IHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGL 241
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A +F +MR E P+ + + ++ N+
Sbjct: 242 PEEAVLVFERMRDEGHRPDHLAFVTVI-------------------------------NT 270
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG-DMMRVAGLINEMQSLEGHS 243
+R+ G ++ LLF E++ DV +WN++IS + G + + + N +S +
Sbjct: 271 YIRL----GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQL 302
+ TL V+SA NL G VH IK G + ++ + +SL+ Y+KC K++ + ++
Sbjct: 327 RS--TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKV 384
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
F + K+ + AM+ G+ NG + + LF M++ I + +LL CA L
Sbjct: 385 FEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDL 444
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
++G H ++K + NL + ++++MY + G + AR +F+RM +D + W ++
Sbjct: 445 EMGSQFHSIIIKK----KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTI 500
Query: 423 IEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
I + EA F M + + S L AC+H + +G ++ + + G
Sbjct: 501 IGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCG 559
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSI 509
++ L + ++D++ +CG++K+A +
Sbjct: 560 LDRDLHTGSSLIDMYSKCGIIKDARKV 586
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/441 (23%), Positives = 188/441 (42%), Gaps = 60/441 (13%)
Query: 130 CDLFNKMRVELE-PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
C LF +V E P + L L +G +H ++ G+ + + N+++ +
Sbjct: 56 CKLFKSRKVFDEMPQRLAL-----------ALRIGKAVHSKSLILGIDSEGRLGNAIVDL 104
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW-NIE 247
YA E F + K DV +WN ++S YS +G +V L + + E + N
Sbjct: 105 YAKCAQVSYAEKQFDFLEK-DVTAWNSMLSMYSSIGKPGKV--LRSFVSLFENQIFPNKF 161
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREI 306
T ++V+S A+ N+ G +HC +IK G + +L+D YAKC ++ + ++F I
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
+ + + SG+++ G EA+ +F++M+ E
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE-------------------------- 255
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF 426
G +L T ++N YIR G + AR +F M DV+AW MI G
Sbjct: 256 ------------GHRPDHLAFVT-VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGH 302
Query: 427 GSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPA 486
G G A++YF M + ++ T S+LSA + G + ++ G+
Sbjct: 303 GKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL-VVHAEAIKLGLASN 361
Query: 487 LDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG--NKTLGEYTAQR 544
+ + +V ++ +C + EA + + + + + W A++ G +K + + +
Sbjct: 362 IYVGSSLVSMYSKCEKM-EAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMK 420
Query: 545 LLELEPDNAGYHTLLSNVKAS 565
D+ + +LLS AS
Sbjct: 421 SSGYNIDDFTFTSLLSTCAAS 441
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 109/226 (48%), Gaps = 10/226 (4%)
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWT 420
AL++G+ VH K+L G ++ + +I+++Y + +S A FD + KDV AW
Sbjct: 75 ALRIGKAVHS---KSLILG-IDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWN 129
Query: 421 SMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWG 480
SM+ + S G + L+ F + E+++ PN TF +LS C+ V G +I+ SM
Sbjct: 130 SMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSM-IK 188
Query: 481 FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEY 540
G+E +VD++ +C + +A + + ++ P++ W L + G
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARR-VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVL 247
Query: 541 TAQRLLEL--EPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDL 584
+R+ + PD+ + T++ N G+ + L EMS D+
Sbjct: 248 VFERMRDEGHRPDHLAFVTVI-NTYIRLGKLKDARLLFGEMSSPDV 292
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 205/634 (32%), Positives = 350/634 (55%), Gaps = 30/634 (4%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRA---LSSMR-ADAVY 62
+ +AW+ + + ++ G+ AL FK M GV D T V L +R A +V+
Sbjct: 166 DLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVH 225
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G++T + DLD CN+++ Y KC + + R+F+ + ++ VSWT+MI+ Y
Sbjct: 226 GQITRKM-----FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNR 280
Query: 123 ERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW-S 180
A F++M + +EPN VTL +L +C + G +HG+AV+ + ++ S
Sbjct: 281 GEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES 340
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM--QS 238
+ +++ +YA+ G + E + ++ R++ +WN LIS Y+ G +++ GL +M Q
Sbjct: 341 LSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQR 400
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDI 298
++ ++ TL ISA G + G+ +H VI+T SD+ +Q SL+D Y+K G +D
Sbjct: 401 IKPDAF---TLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDS 457
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
+ +F +I +S +T +M+ GF QNG+ +EAI+LF M L + + ++ AC++
Sbjct: 458 ASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSS 517
Query: 359 LGALKLGRVVHGYL----MKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
+G+L+ G+ VH L +K+LF +T++++MY + G++++A VF M +
Sbjct: 518 IGSLEKGKWVHHKLIISGLKDLFT---------DTALIDMYAKCGDLNAAETVFRAMSSR 568
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
+++W+SMI +G HG A+ FN M+E +PN V F+++LSAC HSG V EG K Y
Sbjct: 569 SIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG-KYY 627
Query: 475 YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN 534
+++ FG+ P +H C +DL R G +KEA I +M L D+ +WG+L+ ++
Sbjct: 628 FNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQK 687
Query: 535 KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIE 594
+ + L ++ D+ GY+TLLSN+ A G W E LR M +LKK PG+S IE
Sbjct: 688 MDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIE 747
Query: 595 VKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQD 628
+ + F +G+ + +EIY L L +T +
Sbjct: 748 IDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNE 781
Score = 196 bits (499), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/575 (24%), Positives = 286/575 (49%), Gaps = 19/575 (3%)
Query: 5 PNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGK 64
P++ M + + I+ +V +A+ + ++ F FP V RA + R G
Sbjct: 63 PDSFM-YGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGG 121
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H I+ G+D D +++ Y + + A +VFD M RD+V+W+++++ +
Sbjct: 122 KVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENG 181
Query: 125 HVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
V A +F M + +EP++VT+I +++ C L + +HG + +D ++ N
Sbjct: 182 EVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCN 241
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
S+L MY+ G E +F +I K++ SW +IS Y+ + +EM G
Sbjct: 242 SLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIK-SGIE 300
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV--LQTSLLDFYAKCGKLDISVQ 301
N+ TL V+S+ G + +G+ VH ++ + L +L++ YA+CGKL
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCET 360
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+ R + ++ + +++S + G ++A+ LF+QM + + + + AC N G
Sbjct: 361 VLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
+ LG+ +HG++++ + + ++ S+++MY + G++ SA VF+++ + V+ W S
Sbjct: 421 VPLGKQIHGHVIRTDVS-----DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNS 475
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
M+ GF +G EA+ F+ M ++ N VTFL+++ ACS G + +G +++ +
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS- 534
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYT 541
G++ L T ++D++ +CG + A ++ M W +++ A G++G T
Sbjct: 535 GLKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRS-IVSWSSMINAYGMHGRIGSAIST 592
Query: 542 AQRLLE--LEPDNAGYHTLLSNVKASAGRWNEVEE 574
+++E +P+ + NV ++ G VEE
Sbjct: 593 FNQMVESGTKPN----EVVFMNVLSACGHSGSVEE 623
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/462 (25%), Positives = 219/462 (47%), Gaps = 22/462 (4%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVEL-EPNSVTLIVMLQACCA 156
+R VF+ + D + +I + + A DL++++ E + + +L+AC
Sbjct: 53 SRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAG 112
Query: 157 STP-LNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNI 215
S L+VG ++HG +K GV D ++ S+L MY G+ + E +F + RD+ +W+
Sbjct: 113 SREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWST 172
Query: 216 LISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT 275
L+S G++++ + M +G + T+ V+ A+ G L VH + +
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVD-DGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRK 231
Query: 276 GFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFME-AIAL 333
F D+ L SLL Y+KCG L S ++F +I K+ ++ AM+S + G F E A+
Sbjct: 232 MFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY-NRGEFSEKALRS 290
Query: 334 FQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN 393
F +M + ++L +C +G ++ G+ VHG+ ++ + E + +++
Sbjct: 291 FSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES---LSLALVE 347
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
+Y G +S V + ++++AW S+I + G +AL F M+ R++P++ T
Sbjct: 348 LYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFT 407
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDH---HTCMVDLFGRCGMVKEALSII 510
S +SAC ++GLV G +I+ G I + ++D++ + G V A S +
Sbjct: 408 LASSISACENAGLVPLGKQIH-----GHVIRTDVSDEFVQNSLIDMYSKSGSVDSA-STV 461
Query: 511 LKMVILPDSRIWGALLAASGVYGNK----TLGEYTAQRLLEL 548
+ W ++L GN +L +Y LE+
Sbjct: 462 FNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEM 503
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 159/320 (49%), Gaps = 15/320 (4%)
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGF--SDDVLQTSLLDFYAKCGKLDISVQLFREI 306
+T + F C +L +H ++ TG D + T L++ YA G D S +F
Sbjct: 1 MTQYMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAF 60
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA-NLGALKLG 365
+ G ++ + AI L+ ++ +E I ++ ++L ACA + L +G
Sbjct: 61 PYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVG 120
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
VHG ++K G V+ + +ETS+L MY + GN+S A VFD MPV+D++AW++++
Sbjct: 121 GKVHGRIIK----GGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSS 176
Query: 426 FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEP 485
+G +AL+ F M++ ++P++VT +S++ C+ G + ++ +
Sbjct: 177 CLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMF--- 233
Query: 486 ALDHHTC--MVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA--SGVYGNKTLGEYT 541
LD C ++ ++ +CG + + I K + ++ W A++++ G + K L ++
Sbjct: 234 DLDETLCNSLLTMYSKCGDLLSSERIFEK-IAKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 542 AQRLLELEPDNAGYHTLLSN 561
+EP+ +++LS+
Sbjct: 293 EMIKSGIEPNLVTLYSVLSS 312
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 332 bits (850), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 199/607 (32%), Positives = 331/607 (54%), Gaps = 15/607 (2%)
Query: 2 EEEPNNTM-AWNLTIRTHVDLGQFHSALSTFKKMRQMGVP--HDTFTFPVVNRALSSMRA 58
EE P +++ ++N+ IR +V G +H A+S F +M GV D +T+P V +A +++
Sbjct: 73 EEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKS 132
Query: 59 DAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIA 118
+ G + H ++ D Y N ++ Y+ + AR VFD+M +RDV+SW +MI+
Sbjct: 133 MKL-GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMIS 191
Query: 119 GYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM 177
GY +++ A +F+ M E ++ + T++ ML C L +G +H + +
Sbjct: 192 GYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGD 251
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
VKN+++ MY G +E +F + +RDV +W +I+ Y+ GD+ L MQ
Sbjct: 252 KIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQ 311
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKL 296
EG N T+ ++S ++ G+ +H ++ +SD +++TSL+ YAKC ++
Sbjct: 312 -FEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV 370
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC 356
D+ ++F A+++G +QN +A+ LF++M+ ED+ +LL A
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAY 430
Query: 357 ANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF----DRMP 412
A L L+ +H YL K F ++ T ++++Y + G + SA +F ++
Sbjct: 431 AALADLRQAMNIHCYLTKTGFMSSLDA----ATGLVHVYSKCGTLESAHKIFNGIQEKHK 486
Query: 413 VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCK 472
KDV+ W ++I G+G HG G AL+ F M+ + PN +TF S L+ACSHSGLV EG
Sbjct: 487 SKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLT 546
Query: 473 IYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVY 532
++ M + +H+TC+VDL GR G + EA ++I + P S +WGALLAA +
Sbjct: 547 LFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTH 606
Query: 533 GNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSC 592
N LGE A +L ELEP+N G + LL+N+ A+ GRW ++E++R M L+KKPG S
Sbjct: 607 ENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHST 666
Query: 593 IEVKGVS 599
IE++ S
Sbjct: 667 IEIRSNS 673
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 185/389 (47%), Gaps = 24/389 (6%)
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE- 247
YA G LF E+ + + S+NI+I Y G + M S EG +
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVS-EGVKCVPDG 117
Query: 248 -TLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFRE 305
T V A + ++ G VH ++++ F D +Q +LL Y GK++++ +F
Sbjct: 118 YTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 177
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
+ + I+ M+SG+ +NG +A+ +F M E + + ++L C +L L++G
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMG 237
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
R VH + + +E ++ +++NMY++ G + AR VFDRM +DVI WT MI G
Sbjct: 238 RNVHKLVEEKRLGDKIE----VKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMING 293
Query: 426 FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG-CKIYYSMKWGFGIE 484
+ G AL+ LM ++PN+VT SL+S C + V++G C ++++ +
Sbjct: 294 YTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSD 353
Query: 485 PALDHHTCMVDLFGRCGMVK---EALSIILKMVILPDSRIWGALLAASGVYGNK----TL 537
++ T ++ ++ +C V S K P W A++A G N+ L
Sbjct: 354 IIIE--TSLISMYAKCKRVDLCFRVFSGASKYHTGP----WSAIIA--GCVQNELVSDAL 405
Query: 538 GEYTAQRLLELEPDNAGYHTLLSNVKASA 566
G + R ++EP+ A ++LL A A
Sbjct: 406 GLFKRMRREDVEPNIATLNSLLPAYAALA 434
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 143/267 (53%), Gaps = 13/267 (4%)
Query: 252 VISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSY 311
+++ FA ++SK + +HC VI G + ++L YA CG + + +LF E+ S
Sbjct: 21 LLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSL 80
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVH 369
++ ++ +++ G + +AI++F +M +E + VP+ + + A L ++KLG VVH
Sbjct: 81 LSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVH 140
Query: 370 GYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSH 429
G ++++ F + +++ ++L MY+ G + AR VFD M +DVI+W +MI G+ +
Sbjct: 141 GRILRSWFG----RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN 196
Query: 430 GFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG---CKIYYSMKWGFGIEPA 486
G+ +AL F+ M+ + + T +S+L C H + G K+ + G IE
Sbjct: 197 GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVK 256
Query: 487 LDHHTCMVDLFGRCGMVKEALSIILKM 513
+V+++ +CG + EA + +M
Sbjct: 257 ----NALVNMYLKCGRMDEARFVFDRM 279
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 331 bits (849), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 199/631 (31%), Positives = 323/631 (51%), Gaps = 70/631 (11%)
Query: 57 RADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSM 116
+ A+Y + H I+ G +++ N +ID Y KC + R+VFD M R++ +W S+
Sbjct: 33 KLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSV 92
Query: 117 IAGYISERHVSVACDLFNKM-------------------RVE-------------LEPNS 144
+ G + A LF M R E N
Sbjct: 93 VTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNE 152
Query: 145 VTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSE 204
+ +L AC +N G Q+H KS L D + ++++ MY+ G+ + + +F E
Sbjct: 153 YSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 205 INKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE-TLTLVISAFAKCGNLS 263
+ R+V SWN LI+ + G + + M LE E TL VISA A +
Sbjct: 213 MGDRNVVSWNSLITCFEQNGPAVEALDVFQMM--LESRVEPDEVTLASVISACASLSAIK 270
Query: 264 KGEGVHCLVIKTG--FSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGF 321
G+ VH V+K +D +L + +D YAKC ++ + +F + ++ I +M+SG+
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 322 -------------------------------IQNGSFMEAIALFQQMQAEDLVIVPEIWR 350
QNG EA++LF ++ E + +
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFA 390
Query: 351 NLLDACANLGALKLGRVVHGYLMKN--LFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
N+L ACA+L L LG H +++K+ F E ++ + S+++MY++ G + VF
Sbjct: 391 NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
+M +D ++W +MI GF +G+G EAL+ F M+E +P+ +T + +LSAC H+G V
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVE 510
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
EG + SM FG+ P DH+TCMVDL GR G ++EA S+I +M + PDS IWG+LLAA
Sbjct: 511 EGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Query: 529 SGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKP 588
V+ N TLG+Y A++LLE+EP N+G + LLSN+ A G+W +V +R+ M ++ + K+P
Sbjct: 571 CKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQP 630
Query: 589 GWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
G S I+++G + F+ D +HP ++I++ L
Sbjct: 631 GCSWIKIQGHDHVFMVKDKSHPRKKQIHSLL 661
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 208/464 (44%), Gaps = 54/464 (11%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN + + AL F M + G + ++F V A S + D G H +
Sbjct: 120 WNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLN-DMNKGVQVHSLI 178
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
+ D+Y + ++D Y KC + A+RVFD M R+VVSW S+I + A
Sbjct: 179 AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEAL 238
Query: 131 DLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM-DWSVKNSVLRM 188
D+F M +EP+ VTL ++ AC + + + VG ++HG VK+ L D + N+ + M
Sbjct: 239 DVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDM 298
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI-- 246
YA +E +F + R+V + +IS Y+M + +M SWN
Sbjct: 299 YAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALI 358
Query: 247 ----------ETLTL------------------VISAFAKCGNLSKGEGVHCLVIKTGFS 278
E L+L ++ A A L G H V+K GF
Sbjct: 359 AGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFK 418
Query: 279 ------DDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAI 331
DD+ + SL+D Y KCG ++ +FR++ + ++ AM+ GF QNG EA+
Sbjct: 419 FQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEAL 478
Query: 332 ALFQQM-----QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLH 386
LF++M + + + ++ +L AC + G ++ GR + ++ P+ +
Sbjct: 479 ELFREMLESGEKPDHITMI-----GVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY- 532
Query: 387 METSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGSH 429
T ++++ R G + A+++ + MP++ D + W S++ H
Sbjct: 533 --TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 160/406 (39%), Gaps = 71/406 (17%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++WN I G AL F+ M + V D T V A +S+ A V ++
Sbjct: 217 NVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVH 276
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
V L D+ N +D Y KC I AR +FD M R+V++ TSMI+GY
Sbjct: 277 GRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAAST 336
Query: 127 SVACDLFNKM--------------------------------RVELEPNSVTLIVMLQAC 154
A +F KM R + P + +L+AC
Sbjct: 337 KAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKAC 396
Query: 155 CASTPLNVGTQI------HGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR 208
L++G Q HG+ +SG D V NS++ MY G EE L+F ++ +R
Sbjct: 397 ADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMER 456
Query: 209 DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV 268
D SWN +I ++ G L EM G + T+ V+SA G + EG
Sbjct: 457 DCVSWNAMIIGFAQNGYGNEALELFREMLE-SGEKPDHITMIGVLSACGHAGFVE--EGR 513
Query: 269 HCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
H Y D V R+ H+ + L +GF++
Sbjct: 514 H--------------------YFSSMTRDFGVAPLRD-HYTCMVDLLG-RAGFLE----- 546
Query: 329 EAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
EA ++ ++M + + IW +LL AC + LG+ V L++
Sbjct: 547 EAKSMIEEMPMQPDSV---IWGSLLAACKVHRNITLGKYVAEKLLE 589
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 120/292 (41%), Gaps = 74/292 (25%)
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC--ANLGALKLGR 366
KS++ L A +S F + F + LLD+C + L A+ + R
Sbjct: 4 KSFLKLAADLSSFTDSSPFAK----------------------LLDSCIKSKLSAIYV-R 40
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV------------- 413
VH ++K+ F+ + ++ +++ Y + G++ R VFD+MP
Sbjct: 41 YVHASVIKSGFSNEI----FIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGL 96
Query: 414 ------------------KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFL 455
+D W SM+ GF H EAL YF +M + N +F
Sbjct: 97 TKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFA 156
Query: 456 SLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDH---HTCMVDLFGRCGMVKEALSIILK 512
S+LSACS +++G +++ + P L + +VD++ +CG V +A + +
Sbjct: 157 SVLSACSGLNDMNKGVQVHSLI----AKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDE 212
Query: 513 MVILPDSRI--WGALLAASGVYGNKTLGEYTAQRLLE--LEPDNAGYHTLLS 560
M D + W +L+ G Q +LE +EPD +++S
Sbjct: 213 M---GDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVIS 261
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 198/592 (33%), Positives = 314/592 (53%), Gaps = 7/592 (1%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
EP+ + W + +R + + + + + + G +D F +A + ++ D G
Sbjct: 104 EPDFYL-WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQ-DLDNG 161
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K HC +++ D ++D Y KC I A +VF+ + R+VV WTSMIAGY+
Sbjct: 162 KKIHCQLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 124 RHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
LFN+MR + N T ++ AC + L+ G HG VKSG+ + +
Sbjct: 221 DLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLV 280
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
S+L MY G +F+E + D+ W +I Y+ G + L +M+ +E
Sbjct: 281 TSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQL 302
N T+ V+S NL G VH L IK G D + +L+ YAKC + + +
Sbjct: 341 P-NCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYV 399
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
F K + +++SGF QNGS EA+ LF +M +E + +L ACA+LG+L
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSL 459
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
+G +H Y +K F ++H+ T++L+ Y + G+ SAR +FD + K+ I W++M
Sbjct: 460 AVGSSLHAYSVKLGF--LASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAM 517
Query: 423 IEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
I G+G G +L+ F M++ + +PN TF S+LSAC H+G+V+EG K + SM +
Sbjct: 518 IGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYN 577
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTA 542
P+ H+TCMVD+ R G +++AL II KM I PD R +GA L G++ LGE
Sbjct: 578 FTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVI 637
Query: 543 QRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIE 594
+++L+L PD+A Y+ L+SN+ AS GRWN+ +E+R M ++ L K G S +E
Sbjct: 638 KKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/400 (27%), Positives = 205/400 (51%), Gaps = 21/400 (5%)
Query: 144 SVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFS 203
S ++L C T ++ Q HG +G++ D S+ ++ +Y G T++ L+F
Sbjct: 44 SSPCFLLLSKC---TNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFD 100
Query: 204 EINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLS 263
+I + D W +++ Y + + + V L + + G ++ + + A + +L
Sbjct: 101 QIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMK-HGFRYDDIVFSKALKACTELQDLD 159
Query: 264 KGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQ 323
G+ +HC ++K D+V+ T LLD YAKCG++ + ++F +I ++ + +M++G+++
Sbjct: 160 NGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVK 219
Query: 324 NGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEG 383
N E + LF +M+ +++ + L+ AC L AL G+ HG L+K+ +E
Sbjct: 220 NDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS----GIEL 275
Query: 384 NLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM 443
+ + TS+L+MY++ G+IS+AR VF+ D++ WT+MI G+ +G EAL F M
Sbjct: 276 SSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMK 335
Query: 444 EHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMK---WGFGIEPALDHHTCMVDLFGR 499
++PN VT S+LS C + G ++ S+K W + AL H ++ +
Sbjct: 336 GVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVH------MYAK 389
Query: 500 CGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGE 539
C ++A + +M D W +++ SG N ++ E
Sbjct: 390 CYQNRDA-KYVFEMESEKDIVAWNSII--SGFSQNGSIHE 426
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY 62
E + +AWN I G H AL F +M V + T + A +S+ + AV
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAV- 461
Query: 63 GKMTHCVAIQMGL--DLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
G H ++++G ++ ++DFY KC AR +FD + ++ ++W++MI GY
Sbjct: 462 GSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGY 521
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQ 165
+ + +LF +M + + +PN T +L AC + +N G +
Sbjct: 522 GKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKK 567
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 339/620 (54%), Gaps = 16/620 (2%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQ--MGVPHDTFTFPVVNRALSSMRADAVYGKMTHC 68
WN + + FH L FK++ + VP D+FTFP V +A ++ + + G+M H
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRLLNCSICVP-DSFTFPNVIKAYGALGREFL-GRMIHT 131
Query: 69 VAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSV 128
+ ++ G D+ ++++ Y K + +VFD M RDV SW ++I+ +
Sbjct: 132 LVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEK 191
Query: 129 ACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLR 187
A +LF +M EPNSV+L V + AC L G +IH VK G +D V ++++
Sbjct: 192 ALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVD 251
Query: 188 MYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
MY E +F ++ ++ + +WN +I Y GD ++N M +EG +
Sbjct: 252 MYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRM-IIEGTRPSQT 310
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREI 306
TLT ++ A ++ NL G+ +H VI++ + D+ + SL+D Y KCG+ +++ +F +
Sbjct: 311 TLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKT 370
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI--WRNLLDACANLGALKL 364
+ M+S +I G++ +A+ ++ QM + + + P++ + ++L AC+ L AL+
Sbjct: 371 QKDVAESWNVMISSYISVGNWFKAVEVYDQMVS--VGVKPDVVTFTSVLPACSQLAALEK 428
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
G+ +H ++ +E + + +++L+MY + GN A +F+ +P KDV++WT MI
Sbjct: 429 GKQIH----LSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMIS 484
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
+GSHG EAL F+ M + ++P+ VT L++LSAC H+GL+ EG K + M+ +GIE
Sbjct: 485 AYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIE 544
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPD-SRIWGALLAASGVYGNKTLGEYTAQ 543
P ++H++CM+D+ GR G + EA II + D + + L +A ++ +LG+ A+
Sbjct: 545 PIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIAR 604
Query: 544 RLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFL 603
L+E PD+A + +L N+ AS W+ +R +M E L+KKPG S IE+ F
Sbjct: 605 LLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFF 664
Query: 604 SGDITHPEAEEIYAALCTLS 623
+ D +H AE +Y L LS
Sbjct: 665 AEDRSHLRAENVYECLALLS 684
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 137/507 (27%), Positives = 255/507 (50%), Gaps = 21/507 (4%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFD-LMLHRDVVSWTSMIAGYIS 122
K+ H + +GL D+ C ++I+ Y C AR VF+ + DV W S+++GY
Sbjct: 24 KLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSK 83
Query: 123 ERHVSVACDLFNKMR--VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
++F ++ P+S T +++A A +G IH VKSG + D
Sbjct: 84 NSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVV 143
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V +S++ MYA E +F E+ +RDVASWN +IS + G+ + L M+S
Sbjct: 144 VASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMES-S 202
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDIS 299
G N +LT+ ISA ++ L +G+ +H +K GF D+ + ++L+D Y KC L+++
Sbjct: 203 GFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVA 262
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
++F+++ KS + +M+ G++ G + + +M E ++L AC+
Sbjct: 263 REVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRS 322
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
L G+ +HGY+++++ N ++++ S++++Y + G + A VF + +W
Sbjct: 323 RNLLHGKFIHGYVIRSVVN----ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESW 378
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKW 479
MI + S G F+A++ ++ M+ ++P+ VTF S+L ACS + +G +I+ S+
Sbjct: 379 NVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSIS- 437
Query: 480 GFGIEPALDHH----TCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN- 534
E L+ + ++D++ +CG KEA I + D W +++A G +G
Sbjct: 438 ----ESRLETDELLLSALLDMYSKCGNEKEAFR-IFNSIPKKDVVSWTVMISAYGSHGQP 492
Query: 535 -KTLGEYTAQRLLELEPDNAGYHTLLS 560
+ L ++ + L+PD +LS
Sbjct: 493 REALYQFDEMQKFGLKPDGVTLLAVLS 519
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 10 AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCV 69
+WN+ I +++ +G + A+ + +M +GV D TF V A S + A GK H
Sbjct: 377 SWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA-LEKGKQIHLS 435
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA 129
+ L+ D + ++D Y KC A R+F+ + +DVVSWT MI+ Y S A
Sbjct: 436 ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREA 495
Query: 130 CDLFNKM-RVELEPNSVTLIVMLQAC 154
F++M + L+P+ VTL+ +L AC
Sbjct: 496 LYQFDEMQKFGLKPDGVTLLAVLSAC 521
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 201/637 (31%), Positives = 339/637 (53%), Gaps = 22/637 (3%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E + N + W I + L+ F +M+ G ++FTF AL + + V
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAA---ALGVLAEEGV 209
Query: 62 YGK--MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
G+ H V ++ GLD + N++I+ Y+KC + AR +FD + VV+W SMI+G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 120 YISERHVSVACDLFNKMR---VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
Y + A +F MR V L +S ++ L C L Q+H VK G L
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKL--CANLKELRFTEQLHCSVVKYGFL 327
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEIN-KRDVASWNILISFYSMVGDMMRVAGLINE 235
D +++ +++ Y+ + + LF EI +V SW +IS + L +E
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 236 MQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCG 294
M+ +G N T +++++A +S E VH V+KT + + T+LLD Y K G
Sbjct: 388 MKR-KGVRPNEFTYSVILTALPV---ISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLG 442
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
K++ + ++F I K + AM++G+ Q G AI +F ++ + + ++L+
Sbjct: 443 KVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 355 ACANLGA-LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV 413
CA A + G+ HG+ +K+ ++ +L + +++L MY + GNI SA VF R
Sbjct: 503 VCAATNASMGQGKQFHGFAIKS----RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 414 KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKI 473
KD+++W SMI G+ HG +AL F M + +++ + VTF+ + +AC+H+GLV EG K
Sbjct: 559 KDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKY 618
Query: 474 YYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
+ M I P +H++CMVDL+ R G +++A+ +I M S IW +LAA V+
Sbjct: 619 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHK 678
Query: 534 NKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
LG A++++ ++P+++ + LLSN+ A +G W E ++R+ M+E+++KK+PG+S I
Sbjct: 679 KTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Query: 594 EVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
EVK +Y FL+GD +HP ++IY L LS +D G
Sbjct: 739 EVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLG 775
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 141/527 (26%), Positives = 257/527 (48%), Gaps = 36/527 (6%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYF 81
G+ A F + ++G+ D F V + +S+ D ++G+ HC I+ G D+
Sbjct: 72 GRTQEAKRLFLNIHRLGMEMDCSIFSSVLK-VSATLCDELFGRQLHCQCIKFGFLDDVSV 130
Query: 82 CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-L 140
+++D Y+K R+VFD M R+VV+WT++I+GY LF +M+ E
Sbjct: 131 GTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGT 190
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
+PNS T L G Q+H VK+G+ V NS++ +Y G+ + +
Sbjct: 191 QPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARI 250
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAK-- 258
LF + + V +WN +IS Y+ G + G+ +S + + L S+FA
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMF--------YSMRLNYVRLSESSFASVI 302
Query: 259 --CGNLSK---GEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIH-FKSY 311
C NL + E +HC V+K GF D ++T+L+ Y+KC + +++LF+EI +
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
++ AM+SGF+QN EA+ LF +M+ + + + +L A + + VH
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSE----VHAQ 418
Query: 372 LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGF 431
++K + E + + T++L+ Y++ G + A VF + KD++AW++M+ G+ G
Sbjct: 419 VVKTNY----ERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGE 474
Query: 432 GFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHT 491
A+K F + + ++PN TF S+L+ C+ + K ++ GF I+ LD
Sbjct: 475 TEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFH----GFAIKSRLDSSL 530
Query: 492 C----MVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN 534
C ++ ++ + G + E+ + K D W ++++ +G
Sbjct: 531 CVSSALLTMYAKKGNI-ESAEEVFKRQREKDLVSWNSMISGYAQHGQ 576
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 134/295 (45%), Gaps = 26/295 (8%)
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVV 368
+SYI+L + GF ++G EA LF + + + I+ ++L A L GR +
Sbjct: 59 ESYISL---LFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQL 115
Query: 369 HGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGS 428
H +K F V + TS+++ Y++G N R VFD M ++V+ WT++I G+
Sbjct: 116 HCQCIKFGFLDDVS----VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 429 HGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALD 488
+ E L F M QPNS TF + L + G+ G ++ +++ G++ +
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV-HTVVVKNGLDKTIP 230
Query: 489 HHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLEL 548
+++L+ +CG V++A I+ + W ++++ G L+L
Sbjct: 231 VSNSLINLYLKCGNVRKA-RILFDKTEVKSVVTWNSMISGYAANG------------LDL 277
Query: 549 EPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFL 603
E Y L+ V+ S + V +L + K+L+ C VK YGFL
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANL--KELRFTEQLHCSVVK---YGFL 327
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 324 bits (830), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 201/638 (31%), Positives = 335/638 (52%), Gaps = 49/638 (7%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKM-RQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCV 69
WN+ I +++ G+ + AL FK+M R V ++ + + A ++ +M
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFEL-ARKLFDEMP--- 122
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA 129
+ DL N MI YV+ +G AR +F++M RDV SW +M++GY V A
Sbjct: 123 ------ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDA 176
Query: 130 CDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY 189
+F++M E N V+ +L A ++ + + + ++ L+ W N +L +
Sbjct: 177 RSVFDRM---PEKNDVSWNALLSAYVQNSKMEEACMLFK-SRENWALVSW---NCLLGGF 229
Query: 190 ADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN---- 245
K E F +N RDV SWN +I+ Y+ G + L +E + +W
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 246 -------IETLTLVISAFAKCGNLSKG-------EGVHCLVIKTGFSDDVLQ-------T 284
+E + + +S +G + K F DV+
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELF--DVMPCRNVSTWN 347
Query: 285 SLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVI 344
+++ YA+CGK+ + LF ++ + ++ AM++G+ Q+G EA+ LF QM+ E +
Sbjct: 348 TMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRL 407
Query: 345 VPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSA 404
+ + L CA++ AL+LG+ +HG L+K G E + ++L MY + G+I A
Sbjct: 408 NRSSFSSALSTCADVVALELGKQLHGRLVK----GGYETGCFVGNALLLMYCKCGSIEEA 463
Query: 405 RAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHS 464
+F M KD+++W +MI G+ HGFG AL++F M ++P+ T +++LSACSH+
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 465 GLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGA 524
GLV +G + +Y+M +G+ P H+ CMVDL GR G++++A +++ M PD+ IWG
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 525 LLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDL 584
LL AS V+GN L E A ++ +EP+N+G + LLSN+ AS+GRW +V +LR M +K +
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 585 KKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTL 622
KK PG+S IE++ ++ F GD HPE +EI+A L L
Sbjct: 644 KKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEEL 681
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 138/532 (25%), Positives = 227/532 (42%), Gaps = 45/532 (8%)
Query: 35 RQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWC 94
R+ H F + RA + + + C D D+ N I Y++
Sbjct: 26 RRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCG------DSDIKEWNVAISSYMRTGR 79
Query: 95 IGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEPNSVTLIVMLQAC 154
A RVF M VS+ MI+GY+ +A LF++M E + V+ VM++
Sbjct: 80 CNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM---PERDLVSWNVMIKGY 136
Query: 155 CASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWN 214
+ L ++ + V W N++L YA G ++ +F + +++ SWN
Sbjct: 137 VRNRNLGKARELFEIMPERDVC-SW---NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWN 192
Query: 215 ILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIK 274
L+S Y M L ++ SWN ++ F K + +
Sbjct: 193 ALLSAYVQNSKMEEACMLFKSRENWALVSWNC-----LLGGFVKKKKIVEARQ---FFDS 244
Query: 275 TGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALF 334
D V +++ YA+ GK+D + QLF E + T AM+SG+IQN EA LF
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF 304
Query: 335 QQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNM 394
+M PE RN + A L G + + K LF+ N+ +++
Sbjct: 305 DKM--------PE--RNEVSWNAMLAGYVQGERME--MAKELFDVMPCRNVSTWNTMITG 352
Query: 395 YIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTF 454
Y + G IS A+ +FD+MP +D ++W +MI G+ G FEAL+ F M + N +F
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 455 LSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV 514
S LS C+ + G +++ + G G E ++ ++ +CG ++EA + + K +
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKG-GYETGCFVGNALLLMYCKCGSIEEA-NDLFKEM 470
Query: 515 ILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE------LEPDNAGYHTLLS 560
D W ++A Y GE A R E L+PD+A +LS
Sbjct: 471 AGKDIVSWNTMIAG---YSRHGFGE-VALRFFESMKREGLKPDDATMVAVLS 518
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 8/163 (4%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV---YG 63
+ ++W I + G AL F +M + G + +F + ALS+ AD V G
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF---SSALSTC-ADVVALELG 428
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K H ++ G + + N ++ Y KC I A +F M +D+VSW +MIAGY
Sbjct: 429 KQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRH 488
Query: 124 RHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQ 165
VA F M+ E L+P+ T++ +L AC + ++ G Q
Sbjct: 489 GFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 323 bits (829), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 192/620 (30%), Positives = 340/620 (54%), Gaps = 8/620 (1%)
Query: 2 EEEP-NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P + ++WN I + G + AL + +++ + D+FT V A ++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV-V 223
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
G+ H A++ G++ + N ++ Y+K ARRVFD M RD VS+ +MI GY
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 121 ISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ V + +F + + +P+ +T+ +L+AC L++ I+ Y +K+G +++ +
Sbjct: 284 LKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V+N ++ +YA G +F+ + +D SWN +IS Y GD+M L M +E
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDIS 299
+ +I T ++IS + +L G+G+H IK+G D+ + +L+D YAKCG++ S
Sbjct: 404 EQADHI-TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+++F + +T ++S ++ G F + + QM+ ++V + L CA+L
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
A +LG+ +H L++ + E L + +++ MY + G + ++ VF+RM +DV+ W
Sbjct: 523 AAKRLGKEIHCCLLRFGY----ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTW 578
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKW 479
T MI +G +G G +AL+ F M + + P+SV F++++ ACSHSGLV EG + MK
Sbjct: 579 TGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKT 638
Query: 480 GFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGE 539
+ I+P ++H+ C+VDL R + +A I M I PD+ IW ++L A G+ E
Sbjct: 639 HYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAE 698
Query: 540 YTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVS 599
++R++EL PD+ GY L SN A+ +W++V +R+ + +K + K PG+S IEV
Sbjct: 699 RVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNV 758
Query: 600 YGFLSGDITHPEAEEIYAAL 619
+ F SGD + P++E IY +L
Sbjct: 759 HVFSSGDDSAPQSEAIYKSL 778
Score = 198 bits (504), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 147/552 (26%), Positives = 269/552 (48%), Gaps = 26/552 (4%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
N WN IR G F AL + K+R+ V D +TFP V +A + + DA G +
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGL-FDAEMGDL 127
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
+ + MG + DL+ N ++D Y + + AR+VFD M RD+VSW S+I+GY S +
Sbjct: 128 VYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGY 187
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A +++++++ + P+S T+ +L A + G +HG+A+KSGV V N
Sbjct: 188 YEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNG 247
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFY---SMVGDMMRVAGLINEMQSLEG 241
++ MY + +F E++ RD S+N +I Y MV + +R+ +++L+
Sbjct: 248 LVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-----LENLDQ 302
Query: 242 HSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISV 300
++ T++ V+ A +LS + ++ ++K GF + ++ L+D YAKCG + +
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
+F + K ++ +++SG+IQ+G MEA+ LF+ M + + L+ L
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLA 422
Query: 361 ALKLGRVVHGYLMKNLFNGPVEG---NLHMETSILNMYIRGGNISSARAVFDRMPVKDVI 417
LK G+ +H NG G +L + ++++MY + G + + +F M D +
Sbjct: 423 DLKFGKGLHS-------NGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTV 475
Query: 418 AWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM 477
W ++I G L+ M + + P+ TFL L C+ G +I+ +
Sbjct: 476 TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCL 535
Query: 478 KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTL 537
FG E L +++++ +CG ++ + + +M D W ++ A G+YG
Sbjct: 536 -LRFGYESELQIGNALIEMYSKCGCLENSSRVFERMS-RRDVVTWTGMIYAYGMYGE--- 590
Query: 538 GEYTAQRLLELE 549
GE + ++E
Sbjct: 591 GEKALETFADME 602
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 254/540 (47%), Gaps = 40/540 (7%)
Query: 47 PVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVF-DLM 105
P ++RALSS ++ + H + I +GLD +F +ID Y + VF +
Sbjct: 8 PFISRALSS-SSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 106 LHRDVVSWTSMIAGYISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGT 164
++V W S+I + A + + K+R ++ P+ T +++AC +G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 165 QIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG 224
++ + G D V N+++ MY+ G +F E+ RD+ SWN LIS YS G
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 225 DMMRVAGLINEMQSLEGHSWNIE---TLTLVISAFAKCGNLSKGEGVHCLVIK-TGFSDD 280
+ +E++ +SW + T++ V+ AF + +G+G+H +K S
Sbjct: 187 YYEEALEIYHELK----NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV 242
Query: 281 VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAE 340
V+ L+ Y K + + ++F E+ + ++ M+ G+++ E++ +F + +
Sbjct: 243 VVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ 302
Query: 341 ---DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR 397
DL+ V + R AC +L L L + ++ Y++K F +E + ++++Y +
Sbjct: 303 FKPDLLTVSSVLR----ACGHLRDLSLAKYIYNYMLKAGF--VLESTVR--NILIDVYAK 354
Query: 398 GGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSL 457
G++ +AR VF+ M KD ++W S+I G+ G EA+K F +MM Q + +T+L L
Sbjct: 355 CGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Query: 458 LSACSH-------SGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSII 510
+S + GL S G K GI L ++D++ +CG V ++L I
Sbjct: 415 ISVSTRLADLKFGKGLHSNGIK--------SGICIDLSVSNALIDMYAKCGEVGDSLKIF 466
Query: 511 LKMVILPDSRIWGALLAASGVYGNKTLG-EYTAQ-RLLELEPDNAGYHTLLSNVKASAGR 568
M D+ W +++A +G+ G + T Q R E+ PD A + L + A +
Sbjct: 467 SSMGT-GDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAK 525
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 323 bits (827), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 188/557 (33%), Positives = 300/557 (53%), Gaps = 40/557 (7%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELE--PNSVTLIVMLQACC 155
AR+VFD + + +W ++I Y S ++ F M E + PN T +++A
Sbjct: 83 ARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA 142
Query: 156 ASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNI 215
+ L++G +HG AVKS V D V NS++ Y G + +F+ I ++DV SWN
Sbjct: 143 EVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNS 202
Query: 216 LISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT 275
+I+ + G + L +M+S + + ++ T+ V+SA AK NL G V + +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHV-TMVGVLSACAKIRNLEFGRQVCSYIEEN 261
Query: 276 GFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFI------------ 322
+ ++ L ++LD Y KCG ++ + +LF + K +T M+ G+
Sbjct: 262 RVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVL 321
Query: 323 -------------------QNGSFMEAIALFQQMQAEDLVIVPEI-WRNLLDACANLGAL 362
QNG EA+ +F ++Q + + + +I + L ACA +GAL
Sbjct: 322 NSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGAL 381
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
+LGR +H Y+ K+ + N H+ +++++MY + G++ +R VF+ + +DV W++M
Sbjct: 382 ELGRWIHSYIKKH----GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAM 437
Query: 423 IEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
I G HG G EA+ F M E ++PN VTF ++ ACSH+GLV E +++ M+ +G
Sbjct: 438 IGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYG 497
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTA 542
I P H+ C+VD+ GR G +++A+ I M I P + +WGALL A ++ N L E
Sbjct: 498 IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMAC 557
Query: 543 QRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGF 602
RLLELEP N G H LLSN+ A G+W V ELR+ M LKK+PG S IE+ G+ + F
Sbjct: 558 TRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 617
Query: 603 LSGDITHPEAEEIYAAL 619
LSGD HP +E++Y L
Sbjct: 618 LSGDNAHPMSEKVYGKL 634
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/508 (25%), Positives = 237/508 (46%), Gaps = 51/508 (10%)
Query: 148 IVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYA--DKGSTEEVELLFSEI 205
I +++ C + L Q HG+ +++G D + + M A S E +F EI
Sbjct: 34 ISLIERCVSLRQLK---QTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI 90
Query: 206 NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG 265
K + +WN LI Y+ D + +M S N T +I A A+ +LS G
Sbjct: 91 PKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 266 EGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQN 324
+ +H + +K+ DV + SL+ Y CG LD + ++F I K ++ +M++GF+Q
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQK 210
Query: 325 GSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGN 384
GS +A+ LF++M++ED+ +L ACA + L+ GR V Y+ +N N N
Sbjct: 211 GSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN----VN 266
Query: 385 LHMETSILNMYIRGGNISSARAVFD-------------------------------RMPV 413
L + ++L+MY + G+I A+ +FD MP
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 414 KDVIAWTSMIEGFGSHGFGFEALKYFN-LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCK 472
KD++AW ++I + +G EAL F+ L ++ M+ N +T +S LSAC+ G + G
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 473 IYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVY 532
I+ +K GI + ++ ++ +CG ++++ + V D +W A++ ++
Sbjct: 387 IHSYIK-KHGIRMNFHVTSALIHMYSKCGDLEKSRE-VFNSVEKRDVFVWSAMIGGLAMH 444
Query: 533 --GNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKD--LKKKP 588
GN+ + + + ++P+ + + + G +E E L +M + ++
Sbjct: 445 GCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC-SHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 589 GWSCI-EVKGVSYGFLSGDITHPEAEEI 615
++CI +V G S G+L + EA I
Sbjct: 504 HYACIVDVLGRS-GYLEKAVKFIEAMPI 530
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 202/441 (45%), Gaps = 38/441 (8%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKM-RQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
N+ AWN IR + ++ F M + + +TFP + +A + + + ++ G+
Sbjct: 94 NSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSL-GQS 152
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H +A++ + D++ N++I Y C + A +VF + +DVVSW SMI G++ +
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A +LF KM E ++ + VT++ +L AC L G Q+ Y ++ V ++ ++ N+
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 185 VLRMYADKGSTEEVELLF-------------------------------SEINKRDVASW 213
+L MY GS E+ + LF + + ++D+ +W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 214 NILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVI 273
N LIS Y G + +E+Q + N TL +SA A+ G L G +H +
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 274 KTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIA 332
K G + TS L+ Y+KCG L+ S ++F + + AM+ G +G EA+
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 333 LFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSIL 392
+F +MQ ++ + N+ AC++ G + + + N P E + I+
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHY---ACIV 509
Query: 393 NMYIRGGNISSARAVFDRMPV 413
++ R G + A + MP+
Sbjct: 510 DVLGRSGYLEKAVKFIEAMPI 530
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 305/526 (57%), Gaps = 14/526 (2%)
Query: 109 DVVSWTSMIAGYISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIH 167
DV SW S+IA + A F+ MR + L P + ++AC + + G Q H
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 168 GYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMM 227
A G D V ++++ MY+ G E+ +F EI KR++ SW +I Y + G+ +
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNAL 159
Query: 228 RVAGLINEM---QSLEGHSWNIETLTLV--ISAFAKCGNLSKGEGVHCLVIKTGFSDDV- 281
L ++ ++ + + ++++ LV ISA ++ E +H VIK GF V
Sbjct: 160 DAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVS 219
Query: 282 LQTSLLDFYAKCGKLDISV--QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQA 339
+ +LLD YAK G+ ++V ++F +I K ++ ++MS + Q+G EA +F+++
Sbjct: 220 VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVK 279
Query: 340 EDLVIVPEI-WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRG 398
+V I +L A ++ GAL++G+ +H +++ +E ++ + TSI++MY +
Sbjct: 280 NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM----GLEDDVIVGTSIIDMYCKC 335
Query: 399 GNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLL 458
G + +AR FDRM K+V +WT+MI G+G HG +AL+ F M++ ++PN +TF+S+L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 459 SACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPD 518
+ACSH+GL EG + + +MK FG+EP L+H+ CMVDL GR G +++A +I +M + PD
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 519 SRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRRE 578
S IW +LLAA ++ N L E + RL EL+ N GY+ LLS++ A AGRW +VE +R
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515
Query: 579 MSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSR 624
M + L K PG+S +E+ G + FL GD HP+ E+IY L L+R
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNR 561
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 120/433 (27%), Positives = 204/433 (47%), Gaps = 19/433 (4%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
+ + +WN I G AL F MR++ + +FP +A SS+ D G
Sbjct: 37 DKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL-FDIFSG 95
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K TH A G D++ + +I Y C + AR+VFD + R++VSWTSMI GY
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 124 RHVSVACDLFNKMRVELEP-------NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
+ A LF + V+ +S+ L+ ++ AC + IH + +K G
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 177 MDWSVKNSVLRMYAD--KGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLIN 234
SV N++L YA +G +F +I +D S+N ++S Y+ G +
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVL-QTSLLDFYAKC 293
+ + ++N TL+ V+ A + G L G+ +H VI+ G DDV+ TS++D Y KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLL 353
G+++ + + F + K+ + AM++G+ +G +A+ LF M + + ++L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 354 DACANLGALKLGRVVHGYLMKNLFNGP--VEGNLHMETSILNMYIRGGNISSARAVFDRM 411
AC++ G V G+ N G VE L ++++ R G + A + RM
Sbjct: 396 AACSHAGLH-----VEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRM 450
Query: 412 PVK-DVIAWTSMI 423
+K D I W+S++
Sbjct: 451 KMKPDSIIWSSLL 463
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 195/381 (51%), Gaps = 29/381 (7%)
Query: 184 SVLRMYADKGSTEEVEL--LFSE-INKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
SV R+ + TE L LF+ ++K DV SWN +I+ + GD + M+ L
Sbjct: 12 SVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLS 71
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDIS 299
+ + I A + ++ G+ H G+ D+ +S L+ Y+ CGKL+ +
Sbjct: 72 LYPTR-SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDA 130
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM-----QAEDLVIVPEI-WRNLL 353
++F EI ++ ++ +M+ G+ NG+ ++A++LF+ + +D + + + +++
Sbjct: 131 RKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVI 190
Query: 354 DACANLGALKLGRVVHGYLMKNLFNGPVE-GNLHMETSILNMYIRGGN--ISSARAVFDR 410
AC+ + A L +H +++K F+ V GN ++L+ Y +GG ++ AR +FD+
Sbjct: 191 SACSRVPAKGLTESIHSFVIKRGFDRGVSVGN-----TLLDAYAKGGEGGVAVARKIFDQ 245
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQP-NSVTFLSLLSACSHSGLVSE 469
+ KD +++ S++ + G EA + F ++++++ N++T ++L A SHSG +
Sbjct: 246 IVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRI 305
Query: 470 GCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAAS 529
G K + G+E + T ++D++ +CG V+ A +M + R W A++A
Sbjct: 306 G-KCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN-KNVRSWTAMIAGY 363
Query: 530 GVYGNKTLGEYTAQRLLELEP 550
G++G+ A + LEL P
Sbjct: 364 GMHGH-------AAKALELFP 377
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 209/630 (33%), Positives = 343/630 (54%), Gaps = 26/630 (4%)
Query: 12 NLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV-YGKMTHCVA 70
N + ++ GQ+ + L F M + V D TF ++ ++++ D++ G+ HC+A
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILM--LATAVKVDSLALGQQVHCMA 341
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE-RHVSVA 129
+++GLDL L N++I+ Y K G AR VFD M RD++SW S+IAG V
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 130 CDLFNKMRVELEPNSVTLIVMLQACCASTP--LNVGTQIHGYAVKSGVLMDWSVKNSVLR 187
C +R L+P+ T+ +L+A +S P L++ Q+H +A+K + D V +++
Sbjct: 402 CLFMQLLRCGLKPDQYTMTSVLKAA-SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALID 460
Query: 188 MYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
Y+ +E E+LF E + D+ +WN +++ Y+ D + L M +G +
Sbjct: 461 AYSRNRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK-QGERSDDF 518
Query: 248 TLTLVISAFAKCGNL---SKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLF 303
TL V F CG L ++G+ VH IK+G+ D+ + + +LD Y KCG + + F
Sbjct: 519 TLATV---FKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 575
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR--NLLDACANLGA 361
I + M+SG I+NG A +F QM+ + ++P+ + L A + L A
Sbjct: 576 DSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRL--MGVLPDEFTIATLAKASSCLTA 633
Query: 362 LKLGRVVHGYLMK-NLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWT 420
L+ GR +H +K N N P G TS+++MY + G+I A +F R+ + ++ AW
Sbjct: 634 LEQGRQIHANALKLNCTNDPFVG-----TSLVDMYAKCGSIDDAYCLFKRIEMMNITAWN 688
Query: 421 SMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWG 480
+M+ G HG G E L+ F M ++P+ VTF+ +LSACSHSGLVSE K SM
Sbjct: 689 AMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD 748
Query: 481 FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEY 540
+GI+P ++H++C+ D GR G+VK+A ++I M + + ++ LLAA V G+ G+
Sbjct: 749 YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKR 808
Query: 541 TAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSY 600
A +LLELEP ++ + LLSN+ A+A +W+E++ R M +KK PG+S IEVK +
Sbjct: 809 VATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIH 868
Query: 601 GFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
F+ D ++ + E IY + + R + G
Sbjct: 869 IFVVDDRSNRQTELIYRKVKDMIRDIKQEG 898
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 187/423 (44%), Gaps = 44/423 (10%)
Query: 46 FPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLM 105
F + A++S +D + GK TH + + + + N +I Y KC + ARRVFD M
Sbjct: 43 FGFLRNAITS--SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKM 100
Query: 106 LHRDVVSWTSMIAGYISE-----RHVSVACDLFNKMRVELEPNS-VTLIVMLQACCASTP 159
RD+VSW S++A Y ++ A LF +R ++ S +TL ML+ C S
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 160 LNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISF 219
+ HGYA K G+ D V +++ +Y G +E ++LF E+ RDV WN+++
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 220 YSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSD 279
Y +G L + S G + N TL L L++ G D
Sbjct: 221 YLEMGFKEEAIDLSSAFHS-SGLNPNEITLRL----------LARISG-----------D 258
Query: 280 DVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQA 339
D + F +S +FR +S ++ +G + + F M
Sbjct: 259 DSDAGQVKSFANGNDASSVSEIIFR----------NKGLSEYLHSGQYSALLKCFADMVE 308
Query: 340 EDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGG 399
D+ + +L + +L LG+ VH +K ++ L + S++NMY +
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALK----LGLDLMLTVSNSLINMYCKLR 364
Query: 400 NISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
AR VFD M +D+I+W S+I G +G EA+ F ++ ++P+ T S+L
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 460 ACS 462
A S
Sbjct: 425 AAS 427
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 126/265 (47%), Gaps = 3/265 (1%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E + +AWN + + H L F M + G D FT V + + A
Sbjct: 476 ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA-IN 534
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
GK H AI+ G DLDL+ + ++D YVKC + A+ FD + D V+WT+MI+G I
Sbjct: 535 QGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCI 594
Query: 122 SERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
A +F++MR+ + P+ T+ + +A T L G QIH A+K D
Sbjct: 595 ENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPF 654
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V S++ MYA GS ++ LF I ++ +WN ++ + G+ L +M+SL
Sbjct: 655 VGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSL- 713
Query: 241 GHSWNIETLTLVISAFAKCGNLSKG 265
G + T V+SA + G +S+
Sbjct: 714 GIKPDKVTFIGVLSACSHSGLVSEA 738
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 121/301 (40%), Gaps = 54/301 (17%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ +AW I ++ G+ A F +MR MGV D FT + +A S + A G+
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTA-LEQGRQI 640
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H A+++ D + +++D Y KC I A +F + ++ +W +M+ G
Sbjct: 641 HANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEG 700
Query: 127 SVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
LF +M+ + ++P+ VT I +L AC S G Y +
Sbjct: 701 KETLQLFKQMKSLGIKPDKVTFIGVLSACSHS-----GLVSEAY-------------KHM 742
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
M+ D G E+E YS + D + AGL+ + ++L
Sbjct: 743 RSMHGDYGIKPEIE-------------------HYSCLADALGRAGLVKQAENL------ 777
Query: 246 IETLTLVISA------FAKC---GNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKL 296
IE++++ SA A C G+ G+ V +++ D L + YA K
Sbjct: 778 IESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKW 837
Query: 297 D 297
D
Sbjct: 838 D 838
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 203/598 (33%), Positives = 314/598 (52%), Gaps = 19/598 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N +AW+L IR + AL + KM GV +T+P V +A + +RA GK+
Sbjct: 67 NPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRA-IDDGKLI 125
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H D+Y C ++DFY KC + A +VFD M RD+V+W +MI+G+ +
Sbjct: 126 HSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCL 185
Query: 127 SVACDLFNKMRV--ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
+ LF MR L PN T++ M A + L G +HGY + G D VK
Sbjct: 186 TDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTG 245
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
+L +YA +F K++ +W+ +I Y + +M++ AG + Q L +
Sbjct: 246 ILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGY-VENEMIKEAGEVF-FQMLVNDNV 303
Query: 245 NIET---LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISV 300
+ T + L++ A+ G+LS G VHC +K GF D+ +Q +++ FYAK G L +
Sbjct: 304 AMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAF 363
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL--LDACAN 358
+ F EI K I+ ++++G + N E+ LF +M+ I P+I L L AC++
Sbjct: 364 RQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSG--IRPDITTLLGVLTACSH 421
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
L AL G HGY + + + N + ++++MY + G + A+ VFD M +D+++
Sbjct: 422 LAALGHGSSCHGYCVVHGY----AVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVS 477
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
W +M+ GFG HG G EAL FN M E + P+ VT L++LSACSHSGLV EG +++ SM
Sbjct: 478 WNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMS 537
Query: 479 WG-FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTL 537
G F + P +DH+ CM DL R G + EA + KM PD R+ G LL+A Y N L
Sbjct: 538 RGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAEL 597
Query: 538 GEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEV 595
G ++++ L LLSN ++A RW + +R ++ L K PG+S ++V
Sbjct: 598 GNEVSKKMQSLGETTESL-VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 111/227 (48%), Gaps = 10/227 (4%)
Query: 261 NLSKGEGVHCLVIKTGF--SDDVLQTSLLDFYAKCGKLDISVQLFREIHFK--SYITLGA 316
NL G+ +H ++K S + +L YA C +++++ +F EI + I
Sbjct: 14 NLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDL 73
Query: 317 MMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNL 376
M+ + N +A+ L+ +M + + +L ACA L A+ G+++H ++ +
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 377 FNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEAL 436
F ++++ T++++ Y + G + A VFD MP +D++AW +MI GF H + +
Sbjct: 134 F----ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVI 189
Query: 437 KYF-NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGF 481
F ++ + PN T + + A +G + EG ++ Y + GF
Sbjct: 190 GLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGF 236
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 348 IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN---MYIRGGNISSA 404
++ +LL+ C L LG+V+H +L+K L T ++N +Y + A
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSL------TLSSSTVLVNLTRLYASCNEVELA 54
Query: 405 RAVFDRMPVKDV--IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
R VFD +P + IAW MI + S+ F +AL + M+ ++P T+ +L AC+
Sbjct: 55 RHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACA 114
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHHTC--MVDLFGRCGMVKEALSIILKMVILPDSR 520
+ +G I+ + + A D + C +VD + +CG ++ A+ + +M D
Sbjct: 115 GLRAIDDGKLIHSHVNCS---DFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMV 170
Query: 521 IWGALLAA 528
W A+++
Sbjct: 171 AWNAMISG 178
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/592 (33%), Positives = 309/592 (52%), Gaps = 39/592 (6%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYV---KCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
++ H I++GL Y + +I+F + + A VF + +++ W +M G+
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
A L+ M + L PNS T +L++C S G QIHG+ +K G +D
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 180 SVKNSVLRMY-------------------------------ADKGSTEEVELLFSEINKR 208
V S++ MY A +G E + LF EI +
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 209 DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV 268
DV SWN +IS Y+ G+ L +M + T+ V+SA A+ G++ G V
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP-DESTMVTVVSACAQSGSIELGRQV 288
Query: 269 HCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSF 327
H + GF ++ + +L+D Y+KCG+L+ + LF + +K I+ ++ G+ +
Sbjct: 289 HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLY 348
Query: 328 MEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHM 387
EA+ LFQ+M ++L ACA+LGA+ +GR +H Y+ K L V +
Sbjct: 349 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKG--VTNASSL 406
Query: 388 ETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRM 447
TS+++MY + G+I +A VF+ + K + +W +MI GF HG + F+ M + +
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGI 466
Query: 448 QPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEAL 507
QP+ +TF+ LLSACSHSG++ G I+ +M + + P L+H+ CM+DL G G+ KEA
Sbjct: 467 QPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAE 526
Query: 508 SIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAG 567
+I M + PD IW +LL A ++GN LGE A+ L+++EP+N G + LLSN+ ASAG
Sbjct: 527 EMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAG 586
Query: 568 RWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
RWNEV + R +++K +KK PG S IE+ V + F+ GD HP EIY L
Sbjct: 587 RWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGML 638
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 192/404 (47%), Gaps = 48/404 (11%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY 62
+EPN + WN R H SAL + M +G+ +++TFP V ++ + +A
Sbjct: 95 QEPN-LLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFK-E 152
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G+ H +++G DLDLY ++I YV+ + A +VFD HRDVVS+T++I GY S
Sbjct: 153 GQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 123 ERHVSVACDLFNK--------------------------------MRVELEPNSVTLIVM 150
++ A LF++ M+ + P+ T++ +
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDV 210
+ AC S + +G Q+H + G + + N+++ +Y+ G E LF + +DV
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDV 332
Query: 211 ASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHC 270
SWN LI Y+ + L EM G + N T+ ++ A A G + G +H
Sbjct: 333 ISWNTLIGGYTHMNLYKEALLLFQEMLR-SGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 271 LVIK--TGFSD-DVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSF 327
+ K G ++ L+TSL+D YAKCG ++ + Q+F I KS + AM+ GF +G
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 328 MEAIALFQQM-----QAEDLVIVPEIWRNLLDACANLGALKLGR 366
+ LF +M Q +D+ V LL AC++ G L LGR
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFV-----GLLSACSHSGMLDLGR 490
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 138/297 (46%), Gaps = 42/297 (14%)
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSD-DVLQTSLLDF---YAKCGKLDISVQLFREIHF 308
+S C L +H +IK G + + + L++F L ++ +F+ I
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVV 368
+ + M G + + A+ L+ M + L+ + +L +CA A K G+ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 369 HGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR------------------ 410
HG+++K + +L++ TS+++MY++ G + A VFD+
Sbjct: 157 HGHVLKL----GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYAS 212
Query: 411 -------------MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSL 457
+PVKDV++W +MI G+ G EAL+ F MM+ ++P+ T +++
Sbjct: 213 RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTV 272
Query: 458 LSACSHSGLVSEGCKIYYSM-KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+SAC+ SG + G +++ + GFG L ++DL+ +CG ++ A + ++
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFG--SNLKIVNALIDLYSKCGELETACGLFERL 327
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 315 bits (807), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 187/557 (33%), Positives = 306/557 (54%), Gaps = 17/557 (3%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G HC ++ G L+L N +ID Y KC A +VFD M R+VVSW+++++G++
Sbjct: 25 GGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVL 84
Query: 123 ERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
+ + LF++M R + PN T L+AC L G QIHG+ +K G M V
Sbjct: 85 NGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEV 144
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
NS++ MY+ G E E +F I R + SWN +I+ + G + MQ
Sbjct: 145 GNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANI 204
Query: 242 HSWNIE-TLTLVISAFAKCGNLSKGEGVHCLVIKTGF---SDDVLQTSLLDFYAKCGKLD 297
E TLT ++ A + G + G+ +H ++++GF S + SL+D Y KCG L
Sbjct: 205 KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLF 264
Query: 298 ISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA 357
+ + F +I K+ I+ +++ G+ Q G F+EA+ LF+++Q + I +++ A
Sbjct: 265 SARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFA 324
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN----MYIRGGNISSARAVFDRMPV 413
+ L+ G+ + +K L +G +ETS+LN MY++ G + A F M +
Sbjct: 325 DFALLRQGKQMQALAVK-LPSG-------LETSVLNSVVDMYLKCGLVDEAEKCFAEMQL 376
Query: 414 KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKI 473
KDVI+WT +I G+G HG G ++++ F M+ H ++P+ V +L++LSACSHSG++ EG ++
Sbjct: 377 KDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEEL 436
Query: 474 YYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
+ + GI+P ++H+ C+VDL GR G +KEA +I M I P+ IW LL+ V+G
Sbjct: 437 FSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Query: 534 NKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
+ LG+ + LL ++ N + ++SN+ AG WNE R + K LKK+ G S +
Sbjct: 497 DIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWV 556
Query: 594 EVKGVSYGFLSGDITHP 610
E++ + F SG+ +HP
Sbjct: 557 EIEREVHFFRSGEDSHP 573
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 216/432 (50%), Gaps = 14/432 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++W+ + HV G +LS F +M + G+ + FTF +A + A G
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA-LEKGLQI 129
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H +++G ++ + N+++D Y KC I A +VF ++ R ++SW +MIAG++ +
Sbjct: 130 HGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYG 189
Query: 127 SVACDLFNKMR---VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS--V 181
S A D F M+ ++ P+ TL +L+AC ++ + G QIHG+ V+SG S +
Sbjct: 190 SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATI 249
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
S++ +Y G F +I ++ + SW+ LI Y+ G+ + GL +Q L
Sbjct: 250 TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS 309
Query: 242 HSWNIETLTLVISAFAKCGNLSKGEGVHCLVIK--TGFSDDVLQTSLLDFYAKCGKLDIS 299
+ L+ +I FA L +G+ + L +K +G VL S++D Y KCG +D +
Sbjct: 310 QIDSF-ALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL-NSVVDMYLKCGLVDEA 367
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+ F E+ K I+ +++G+ ++G +++ +F +M ++ + +L AC++
Sbjct: 368 EKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHS 427
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIA 418
G +K G + L++ P + ++++ R G + A+ + D MP+K +V
Sbjct: 428 GMIKEGEELFSKLLETHGIKP---RVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGI 484
Query: 419 WTSMIEGFGSHG 430
W +++ HG
Sbjct: 485 WQTLLSLCRVHG 496
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 229/450 (50%), Gaps = 20/450 (4%)
Query: 142 PNS-VTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
PN L+ +L+ C + G Q+H Y +KSG ++ N ++ MY
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+F + +R+V SW+ L+S + + GD+ L +EM +G N T + + A
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLN 121
Query: 261 NLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMS 319
L KG +H +K GF V + SL+D Y+KCG+++ + ++FR I +S I+ AM++
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIA 181
Query: 320 GFIQNGSFMEAIALFQQMQAEDLVIVPEIW--RNLLDACANLGALKLGRVVHGYLMKNLF 377
GF+ G +A+ F MQ ++ P+ + +LL AC++ G + G+ +HG+L+++ F
Sbjct: 182 GFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGF 241
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK 437
+ P + S++++Y++ G + SAR FD++ K +I+W+S+I G+ G EA+
Sbjct: 242 HCPSSATI--TGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDL 496
F + E Q +S S++ + L+ +G ++ ++K G+E ++ +VD+
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDM 357
Query: 497 FGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLEL-----EPD 551
+ +CG+V EA +M L D W ++ YG LG+ + + E+ EPD
Sbjct: 358 YLKCGLVDEAEKCFAEMQ-LKDVISWTVVITG---YGKHGLGKKSVRIFYEMLRHNIEPD 413
Query: 552 NAGYHTLLSNVKASAGRWNEVEELRREMSE 581
Y +LS S G E EEL ++ E
Sbjct: 414 EVCYLAVLSACSHS-GMIKEGEELFSKLLE 442
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 190/618 (30%), Positives = 322/618 (52%), Gaps = 10/618 (1%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+T+ W I V +G+ + +L F ++ + V D + V A S + GK
Sbjct: 212 KSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL-PFLEGGKQ 270
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H ++ GL++D N +ID YVKC + A ++F+ M +++++SWT++++GY
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNAL 330
Query: 126 VSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A +LF M + L+P+ +L +C + L GTQ+H Y +K+ + D V NS
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
++ MYA + +F DV +N +I YS +G + +N + +
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 245 NIETLTLV--ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQ 301
LT V + A A +L + +H L+ K G + D+ ++L+D Y+ C L S
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL 510
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+F E+ K + +M +G++Q EA+ LF ++Q + N++ A NL +
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLAS 570
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
++LG+ H L+K +E N ++ ++L+MY + G+ A FD +DV+ W S
Sbjct: 571 VQLGQEFHCQLLKR----GLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNS 626
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
+I + +HG G +AL+ MM ++PN +TF+ +LSACSH+GLV +G K + + F
Sbjct: 627 VISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLK-QFELMLRF 685
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYT 541
GIEP +H+ CMV L GR G + +A +I KM P + +W +LL+ GN L E+
Sbjct: 686 GIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHA 745
Query: 542 AQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYG 601
A+ + +P ++G T+LSN+ AS G W E +++R M + + K+PG S I + +
Sbjct: 746 AEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHI 805
Query: 602 FLSGDITHPEAEEIYAAL 619
FLS D +H +A +IY L
Sbjct: 806 FLSKDKSHCKANQIYEVL 823
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 144/556 (25%), Positives = 250/556 (44%), Gaps = 54/556 (9%)
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
++ G D D+Y +IDFY+K I AR VFD + + V+WT+MI+G + V+
Sbjct: 175 VKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSL 234
Query: 131 DLFNK-MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY 189
LF + M + P+ L +L AC L G QIH + ++ G+ MD S+ N ++ Y
Sbjct: 235 QLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY 294
Query: 190 ADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETL 249
G LF+ + +++ SW L+S Y L M G ++
Sbjct: 295 VKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF-GLKPDMYAC 353
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQT-SLLDFYAKCGKLDISVQLFREIHF 308
+ ++++ A L G VH IK +D T SL+D YAKC L + ++F
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 309 KSYITLGAMMSGFIQNGS---FMEAIALFQQMQAEDLVIVPEI--WRNLLDACANLGALK 363
+ AM+ G+ + G+ EA+ +F+ M+ +I P + + +LL A A+L +L
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR--LIRPSLLTFVSLLRASASLTSLG 471
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
L + +HG + K N + ++++++Y + +R VFD M VKD++ W SM
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAG----SALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMF 527
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS-MKWGFG 482
G+ EAL F + R +P+ TF ++++A + V G + + +K G
Sbjct: 528 AGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLE 587
Query: 483 IEPALDHHTCMVDLFGRCGMV-------------------------------KEALSIIL 511
P + + ++D++ +CG K+AL ++
Sbjct: 588 CNPYITN--ALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLE 645
Query: 512 KMV---ILPDSRIWGALLAASGVYG--NKTLGEYTAQRLLELEPDNAGYHTLLSNVKASA 566
KM+ I P+ + +L+A G L ++ +EP+ Y ++S + A
Sbjct: 646 KMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVS-LLGRA 704
Query: 567 GRWNEVEELRREMSEK 582
GR N+ EL +M K
Sbjct: 705 GRLNKARELIEKMPTK 720
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 150/563 (26%), Positives = 265/563 (47%), Gaps = 70/563 (12%)
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY- 120
Y + H I GL+LD Y N +I+ Y + + AR+VF+ M R++VSW++M++
Sbjct: 62 YQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACN 121
Query: 121 ---ISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLN--VGTQIHGYAVKSGV 175
I E + V + F + R + PN L +QAC + Q+ + VKSG
Sbjct: 122 HHGIYEESLVVFLE-FWRTRKD-SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGF 179
Query: 176 LMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILIS--------------FYS 221
D V ++ Y G+ + L+F + ++ +W +IS FY
Sbjct: 180 DRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQ 239
Query: 222 MVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DD 280
++ D + G I L+ V+SA + L G+ +H +++ G D
Sbjct: 240 LMEDNVVPDGYI---------------LSTVLSACSILPFLEGGKQIHAHILRYGLEMDA 284
Query: 281 VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAE 340
L L+D Y KCG++ + +LF + K+ I+ ++SG+ QN EA+ LF M
Sbjct: 285 SLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKF 344
Query: 341 DLVIVPEIW--RNLLDACANLGALKLGRVVHGYLMK-NLFNGPVEGNLHMETSILNMYIR 397
L P+++ ++L +CA+L AL G VH Y +K NL N + ++ S+++MY +
Sbjct: 345 GL--KPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGN-----DSYVTNSLIDMYAK 397
Query: 398 GGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGF---EALKYFNLMMEHRMQPNSVTF 454
++ AR VFD DV+ + +MIEG+ G + EAL F M ++P+ +TF
Sbjct: 398 CDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTF 457
Query: 455 LSLLSACSHSGLVSEG-CKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+SLL A + L S G K + + + +G+ + + ++D++ C +K++ + +M
Sbjct: 458 VSLLRAS--ASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM 515
Query: 514 VILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELE-----PDNAGYHTLLSNVKASAGR 568
+ D IW ++ A Y ++ E LEL+ PD + +N+ +AG
Sbjct: 516 KV-KDLVIWNSMFAG---YVQQSENEEALNLFLELQLSRERPDEFTF----ANMVTAAGN 567
Query: 569 WNEV---EELRREMSEKDLKKKP 588
V +E ++ ++ L+ P
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNP 590
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 187/372 (50%), Gaps = 26/372 (6%)
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
+LQ + L+ +HG + G+ +D + N ++ +Y+ G +F ++ +R+
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG-- 267
+ SW+ ++S + G + E S N L+ I A C L G G
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQA---CSGLD-GRGRW 165
Query: 268 ----VHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFI 322
+ ++K+GF DV + T L+DFY K G +D + +F + KS +T M+SG +
Sbjct: 166 MVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV 225
Query: 323 QNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVE 382
+ G ++ LF Q+ +++V I +L AC+ L L+ G+ +H ++++
Sbjct: 226 KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRY------- 278
Query: 383 GNLHMETSILNM----YIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKY 438
L M+ S++N+ Y++ G + +A +F+ MP K++I+WT+++ G+ + EA++
Sbjct: 279 -GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMEL 337
Query: 439 FNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLF 497
F M + ++P+ S+L++C+ + G +++ Y++K G + + + ++D++
Sbjct: 338 FTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTN--SLIDMY 395
Query: 498 GRCGMVKEALSI 509
+C + +A +
Sbjct: 396 AKCDCLTDARKV 407
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E + + + WN +V + AL+ F +++ D FTF + A ++ A
Sbjct: 514 EMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL-ASVQ 572
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
G+ HC ++ GL+ + Y N ++D Y KC A + FD RDVV W S+I+ Y
Sbjct: 573 LGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYA 632
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQAC 154
+ A + KM E +EPN +T + +L AC
Sbjct: 633 NHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 311 bits (798), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 194/628 (30%), Positives = 331/628 (52%), Gaps = 16/628 (2%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY 62
+E + + WN + ++ G+ L F++M G +++T A + A
Sbjct: 244 QEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGF-SYAKL 302
Query: 63 GKMTHCVAIQMGL-DLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
GK H ++ +LY CN +I Y +C + A R+ M + DVV+W S+I GY+
Sbjct: 303 GKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYV 362
Query: 122 SERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
A + F+ M + + V++ ++ A + L G ++H Y +K G +
Sbjct: 363 QNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V N+++ MY+ T + F ++ +D+ SW +I+ Y+ + L ++
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKK- 481
Query: 241 GHSWNIETLTLVISAFAKCGNLSKG----EGVHCLVIKTGFSDDVLQTSLLDFYAKCGKL 296
+E +++ + + ++ K + +HC +++ G D V+Q L+D Y KC +
Sbjct: 482 ----RMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNM 537
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC 356
+ ++F I K ++ +M+S NG+ EA+ LF++M L +L A
Sbjct: 538 GYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAA 597
Query: 357 ANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
A+L AL GR +H YL++ F +EG++ + ++++MY G++ SA+AVFDR+ K +
Sbjct: 598 ASLSALNKGREIHCYLLRKGFC--LEGSIAV--AVVDMYACCGDLQSAKAVFDRIERKGL 653
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
+ +TSMI +G HG G A++ F+ M + P+ ++FL+LL ACSH+GL+ EG
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKI 713
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
M+ + +EP +H+ C+VD+ GR V EA + M P + +W ALLAA + K
Sbjct: 714 MEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKE 773
Query: 537 LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVK 596
+GE AQRLLELEP N G L+SNV A GRWN+VE++R +M ++K PG S IE+
Sbjct: 774 IGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 833
Query: 597 GVSYGFLSGDITHPEAEEIYAALCTLSR 624
G + F + D +HPE++EIY L ++R
Sbjct: 834 GKVHKFTARDKSHPESKEIYEKLSEVTR 861
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 153/571 (26%), Positives = 290/571 (50%), Gaps = 28/571 (4%)
Query: 2 EEEPNNT-MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P+ T AWN I +V G+ SAL+ + MR GVP +FP + +A + +R D
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLR-DI 198
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR-DVVSWTSMIAG 119
G H + +++G + N ++ Y K + ARR+FD + D V W S+++
Sbjct: 199 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 258
Query: 120 YISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGV-LM 177
Y + +LF +M + PNS T++ L AC + +G +IH +KS
Sbjct: 259 YSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSS 318
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGL--INE 235
+ V N+++ MY G + E + ++N DV +WN LI Y V ++M L ++
Sbjct: 319 ELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGY--VQNLMYKEALEFFSD 376
Query: 236 MQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCG 294
M + GH + ++T +I+A + NL G +H VIK G+ ++ + +L+D Y+KC
Sbjct: 377 MIA-AGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
+ F +H K I+ +++G+ QN +EA+ LF+ + + + I I ++L
Sbjct: 436 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
A + L ++ + + +H ++++ V ++ ++++Y + N+ A VF+ + K
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGLLDTV-----IQNELVDVYGKCRNMGYATRVFESIKGK 550
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
DV++WTSMI +G EA++ F M+E + +SV L +LSA + +++G +I+
Sbjct: 551 DVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIH 610
Query: 475 -YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSI---ILKMVILPDSRIWGALLAASG 530
Y ++ GF +E ++ +VD++ CG ++ A ++ I + +L + +++ A G
Sbjct: 611 CYLLRKGFCLEGSIA--VAVVDMYACCGDLQSAKAVFDRIERKGLLQ----YTSMINAYG 664
Query: 531 VY--GNKTLGEYTAQRLLELEPDNAGYHTLL 559
++ G + + R + PD+ + LL
Sbjct: 665 MHGCGKAAVELFDKMRHENVSPDHISFLALL 695
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 234/484 (48%), Gaps = 27/484 (5%)
Query: 75 LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFN 134
+LD + ++ Y KC + A +VFD M R +W +MI Y+S + A L+
Sbjct: 113 FELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYW 171
Query: 135 KMRVELEPNSV-TLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKG 193
MRVE P + + +L+AC + G+++H VK G + N+++ MYA
Sbjct: 172 NMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKND 231
Query: 194 STEEVELLFSEINKR-DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLV 252
LF ++ D WN ++S YS G + L EM + G + N T +
Sbjct: 232 DLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH-MTGPAPNSYT---I 287
Query: 253 ISAFAKCGNLSK---GEGVHCLVIK--TGFSDDVLQTSLLDFYAKCGKLDISVQLFREIH 307
+SA C S G+ +H V+K T S+ + +L+ Y +CGK+ + ++ R+++
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Query: 308 FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRV 367
+T +++ G++QN + EA+ F M A +++ A L L G
Sbjct: 348 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 368 VHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFG 427
+H Y++K+ ++ NL + ++++MY + F RM KD+I+WT++I G+
Sbjct: 408 LHAYVIKHGWD----SNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYA 463
Query: 428 SHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS--HSGLVSEG--CKIYYSMKWGFGI 483
+ EAL+ F + + RM+ + + S+L A S S L+ + C I ++ G +
Sbjct: 464 QNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHI---LRKGL-L 519
Query: 484 EPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQ 543
+ + + +VD++G+C + A + + + + D W +++++S + GN++ +
Sbjct: 520 DTVIQNE--LVDVYGKCRNMGYA-TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFR 576
Query: 544 RLLE 547
R++E
Sbjct: 577 RMVE 580
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 129/271 (47%), Gaps = 7/271 (2%)
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKT--GFSDDVLQTSLLDFYAKCGKLDISVQLF 303
+E V+ K +S+G +H + KT F D L L+ Y KCG LD + ++F
Sbjct: 80 VEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVF 139
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
E+ ++ M+ ++ NG A+AL+ M+ E + + + LL ACA L ++
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSM 422
G +H L+K ++ + ++++MY + ++S+AR +FD K D + W S+
Sbjct: 200 SGSELHSLLVKLGYH----STGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSI 255
Query: 423 IEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
+ + + G E L+ F M PNS T +S L+AC G +I+ S+
Sbjct: 256 LSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
L ++ ++ RCG + +A I+ +M
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQM 346
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 179/629 (28%), Positives = 330/629 (52%), Gaps = 27/629 (4%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFP-VVNRALSSMRADAVYGK 64
+ + WN+ + + G S + F MR + + TF V++ S + D G
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLID--LGV 259
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H + + G+D + N+++ Y KC A ++F +M D V+W MI+GY+
Sbjct: 260 QLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSG 319
Query: 125 HVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
+ + F +M + P+++T +L + L QIH Y ++ + +D + +
Sbjct: 320 LMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTS 379
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
+++ Y + +FS+ N DV + +IS Y G + SLE
Sbjct: 380 ALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYI---------DSLEMFR 430
Query: 244 WNIE--------TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCG 294
W ++ TL ++ L G +H +IK GF + + +++D YAKCG
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCG 490
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
+++++ ++F + + ++ +M++ Q+ + AI +F+QM + L
Sbjct: 491 RMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 550
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
ACANL + G+ +HG+++K+ + +++ E+++++MY + GN+ +A VF M K
Sbjct: 551 ACANLPSESFGKAIHGFMIKH----SLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHR-MQPNSVTFLSLLSACSHSGLVSEGCKI 473
++++W S+I G+HG ++L F+ M+E ++P+ +TFL ++S+C H G V EG +
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRF 666
Query: 474 YYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
+ SM +GI+P +H+ C+VDLFGR G + EA + M PD+ +WG LL A ++
Sbjct: 667 FRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHK 726
Query: 534 NKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
N L E + +L++L+P N+GY+ L+SN A+A W V ++R M E++++K PG+S I
Sbjct: 727 NVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWI 786
Query: 594 EVKGVSYGFLSGDITHPEAEEIYAALCTL 622
E+ ++ F+SGD+ HPE+ IY+ L +L
Sbjct: 787 EINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 209 bits (531), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 152/585 (25%), Positives = 294/585 (50%), Gaps = 32/585 (5%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN I + V G + AL+ + KM GV D TFP + +A +++ ++ V+
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
+G+D + + +++I Y++ I ++FD +L +D V W M+ GY +
Sbjct: 166 -SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 131 DLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY 189
F+ MR+ ++ PN+VT +L C + +++G Q+HG V SGV + S+KNS+L MY
Sbjct: 225 KGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMY 284
Query: 190 ADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETL 249
+ G ++ LF +++ D +WN +IS Y G M EM S G + T
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMIS-SGVLPDAITF 343
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHF 308
+ ++ + +K NL + +HC +++ S D+ TS L+D Y KC + ++ +F + +
Sbjct: 344 SSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNS 403
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQ-----QMQAEDLVIVPEIWRNLLDACANLGALK 363
+ AM+SG++ NG +++++ +F+ ++ ++ +V ++L L ALK
Sbjct: 404 VDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLV-----SILPVIGILLALK 458
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
LGR +HG+++K F + ++ ++++MY + G ++ A +F+R+ +D+++W SMI
Sbjct: 459 LGRELHGFIIKKGF----DNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGI 483
A+ F M + + V+ + LSAC++ S G I+ GF I
Sbjct: 515 TRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIH-----GFMI 569
Query: 484 EPALD----HHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGE 539
+ +L + ++D++ +CG +K A++ + K + + W +++AA G +G
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMN-VFKTMKEKNIVSWNSIIAACGNHGKLKDSL 628
Query: 540 YTAQRLLE---LEPDNAGYHTLLSNVKASAGRWNEVEELRREMSE 581
++E + PD + ++S+ G +E R M+E
Sbjct: 629 CLFHEMVEKSGIRPDQITFLEIISSC-CHVGDVDEGVRFFRSMTE 672
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 174/382 (45%), Gaps = 11/382 (2%)
Query: 132 LFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYAD 191
L N R E L ++LQAC L G Q+H + + + + D +L MYA
Sbjct: 23 LRNSSRFLEETIPRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAM 82
Query: 192 KGSTEEVELLFSEINKR--DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETL 249
GS + +F ++ R + WN +IS + G + + +M G S ++ T
Sbjct: 83 CGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCF-GVSPDVSTF 141
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHF 308
++ A N + + V G ++ + +SL+ Y + GK+D+ +LF +
Sbjct: 142 PCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQ 201
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVV 368
K + M++G+ + G+ I F M+ + + + +L CA+ + LG +
Sbjct: 202 KDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL 261
Query: 369 HGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGS 428
HG ++ + + EG++ + S+L+MY + G A +F M D + W MI G+
Sbjct: 262 HGLVVVSGVD--FEGSI--KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 429 HGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPAL 487
G E+L +F M+ + P+++TF SLL + S + +I+ Y M+ ++ L
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 488 DHHTCMVDLFGRCGMVKEALSI 509
+ ++D + +C V A +I
Sbjct: 378 T--SALIDAYFKCRGVSMAQNI 397
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 148/323 (45%), Gaps = 19/323 (5%)
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIH 307
L+L++ A + L +G+ VH +I S D +L YA CG ++F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 308 FK--SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
+ S +++S F++NG +A+A + +M + + L+ AC L K
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK-- 155
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
+L + + ++ N + +S++ Y+ G I +FDR+ KD + W M+ G
Sbjct: 156 --GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNG 213
Query: 426 FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIE 484
+ G +K F++M ++ PN+VTF +LS C+ L+ G +++ + G E
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFE 273
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
++ + ++ ++ +CG +A S + +M+ D+ W +++ Y L E +
Sbjct: 274 GSIKNS--LLSMYSKCGRFDDA-SKLFRMMSRADTVTWNCMISG---YVQSGLMEESLTF 327
Query: 545 LLEL-----EPDNAGYHTLLSNV 562
E+ PD + +LL +V
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSV 350
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 190/631 (30%), Positives = 340/631 (53%), Gaps = 23/631 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTF----PVVNRALSSMRADAVY 62
N +AWN I +V G+ A F M +M V +F P V+ + S +A+ Y
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 63 GKMTHCVAIQMGLDL--DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
G M +++G + DL+ ++ I Y + I +RRVFD + R++ W +MI Y
Sbjct: 238 GLM-----LKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 121 ISERHVSVACDLFNKM--RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
+ + + +LF + E+ + VT ++ A A + +G Q HG+ K+ +
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQS 238
+ NS++ MY+ GS + +F + +RDV SWN +IS + G L+ EMQ
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDI 298
+G + T+T ++SA + N G+ H +I+ G + + + L+D Y+K G + I
Sbjct: 413 -QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRI 471
Query: 299 SVQLFREIHF--KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC 356
S +LF + + T +M+SG+ QNG + +F++M +++ ++L AC
Sbjct: 472 SQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPAC 531
Query: 357 ANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
+ +G++ LG+ +HG+ ++ ++ N+ + +++++MY + G I A +F + ++
Sbjct: 532 SQIGSVDLGKQLHGFSIRQY----LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
+ +T+MI G+G HG G A+ F M E ++P+++TF+++LSACS+SGL+ EG KI+
Sbjct: 588 VTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEE 647
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPD-SRIWGALLAASGVYGNK 535
M+ + I+P+ +H+ C+ D+ GR G V EA + + + + +WG+LL + ++G
Sbjct: 648 MREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGEL 707
Query: 536 TLGEYTAQRLLELEPDN--AGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
L E ++RL + + +GY LLSN+ A +W V+++RR M EK LKK+ G S I
Sbjct: 708 ELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Query: 594 EVKGVSYGFLSGDITHPEAEEIYAALCTLSR 624
E+ G F+S D HP + EIY + L++
Sbjct: 768 EIAGYVNCFVSRDQEHPHSSEIYDVIDGLAK 798
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 135/520 (25%), Positives = 239/520 (45%), Gaps = 35/520 (6%)
Query: 8 TMAWNLTIRTHVDLGQFHSALSTFKKMRQMG--VPHDTFTFPVVNRALSSMRADAVYGKM 65
T+ WN I + H AL + +M++ D +T+ +A + + + GK
Sbjct: 70 TVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETK-NLKAGKA 128
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKC------WCIGCARRVFDLMLHRDVVSWTSMIAG 119
HC I+ + N++++ YV C + R+VFD M ++VV+W ++I+
Sbjct: 129 VHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISW 188
Query: 120 YISERHVSVACDLFN-KMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG--VL 176
Y+ + AC F MR+E++P+ V+ + + A S + +G +K G +
Sbjct: 189 YVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYV 248
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
D V +S + MYA+ G E +F +R++ WN +I Y ++ L E
Sbjct: 249 KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEA 308
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSD--DVLQTSLLDFYAKCG 294
+ + T L SA + + G H V K F + V+ SL+ Y++CG
Sbjct: 309 IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN-FRELPIVIVNSLMVMYSRCG 367
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
+ S +F + + ++ M+S F+QNG E + L +MQ + I LL
Sbjct: 368 SVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLS 427
Query: 355 ACANLGALKLGRVVHGYLMKN--LFNGPVEGNLHMETSILNMYIRGGNISSARAVFD--R 410
A +NL ++G+ H +L++ F G M + +++MY + G I ++ +F+
Sbjct: 428 AASNLRNKEIGKQTHAFLIRQGIQFEG-------MNSYLIDMYSKSGLIRISQKLFEGSG 480
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
+D W SMI G+ +G + F M+E ++PN+VT S+L ACS G V G
Sbjct: 481 YAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG 540
Query: 471 CKIYYSMKWGFGIEPALDHH----TCMVDLFGRCGMVKEA 506
+++ GF I LD + + +VD++ + G +K A
Sbjct: 541 KQLH-----GFSIRQYLDQNVFVASALVDMYSKAGAIKYA 575
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 193/422 (45%), Gaps = 24/422 (5%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEP----NSVTLIVMLQA 153
AR++FD + V W ++I G+I A +++M+ + P ++ T L+A
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK-KTAPFTNCDAYTYSSTLKA 116
Query: 154 CCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY------ADKGSTEEVELLFSEINK 207
C + L G +H + ++ V NS++ MY D + V +F + +
Sbjct: 117 CAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRR 176
Query: 208 RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
++V +WN LIS+Y G M +E + + V A + ++ K
Sbjct: 177 KNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPV-SFVNVFPAVSISRSIKKANV 235
Query: 268 VHCLVIKTG---FSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQN 324
+ L++K G D + +S + YA+ G ++ S ++F ++ M+ ++QN
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Query: 325 GSFMEAIALFQQMQAEDLVIVPEIWRNL-LDACANLGALKLGRVVHGYLMKNLFNGPVEG 383
+E+I LF + ++ E+ L A + L ++LGR HG++ KN P+
Sbjct: 296 DCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIV- 354
Query: 384 NLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM 443
+ S++ MY R G++ + VF M +DV++W +MI F +G E L M
Sbjct: 355 ---IVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQ 411
Query: 444 EHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGM 502
+ + + +T +LLSA S+ G + + + ++ G E ++ ++D++ + G+
Sbjct: 412 KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE---GMNSYLIDMYSKSGL 468
Query: 503 VK 504
++
Sbjct: 469 IR 470
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRN 351
G ++ QLF I + + ++ GFI N EA+ + +M+ + + +
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS------AR 405
L ACA LK G+ VH +L++ L N + + S++NMY+ N R
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNS----SRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 406 AVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSG 465
VFD M K+V+AW ++I + G EA + F +MM ++P+ V+F+++ A S S
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 466 LVSEGCKIYYSMKWGFGIEPALD 488
+ + ++Y + G E D
Sbjct: 229 SIKKA-NVFYGLMLKLGDEYVKD 250
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 194/607 (31%), Positives = 327/607 (53%), Gaps = 61/607 (10%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWC------IGCARRVFDLMLHRDVVSWTSMI 117
K H +I G+ + F + F WC + A ++F + DVV W +MI
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVF----WCSRLGGHVSYAYKLFVKIPEPDVVVWNNMI 106
Query: 118 AGYISERHVSVACD------LFNKMRVELEPNSVTLIVMLQACCAST-PLNVGTQIHGYA 170
G+ V CD N ++ + P+S T +L L G ++H +
Sbjct: 107 KGW-----SKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHV 161
Query: 171 VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVA 230
VK G+ + V+N++++MY+ G + +F K DV SWN++IS Y+ + +
Sbjct: 162 VKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESI 221
Query: 231 GLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDF 289
L+ EM+ ++ TL LV+SA +K + + VH V + + L+ +L++
Sbjct: 222 ELLVEMERNLVSPTSV-TLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNA 280
Query: 290 YAKCGKLDISVQLFREIH----------FKSYITLG---------------------AMM 318
YA CG++DI+V++FR + K Y+ G M+
Sbjct: 281 YAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMI 340
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKN-LF 377
G+++ G F E++ +F++MQ+ ++ ++L ACA+LG+L++G + Y+ KN +
Sbjct: 341 DGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIK 400
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK 437
N V GN ++++MY + G A+ VF M +D WT+M+ G ++G G EA+K
Sbjct: 401 NDVVVGN-----ALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIK 455
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLF 497
F M + +QP+ +T+L +LSAC+HSG+V + K + M+ IEP+L H+ CMVD+
Sbjct: 456 VFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDML 515
Query: 498 GRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHT 557
GR G+VKEA I+ KM + P+S +WGALL AS ++ ++ + E A+++LELEPDN +
Sbjct: 516 GRAGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYA 575
Query: 558 LLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYA 617
LL N+ A RW ++ E+RR++ + +KK PG+S IEV G ++ F++GD +H ++EEIY
Sbjct: 576 LLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYM 635
Query: 618 ALCTLSR 624
L L++
Sbjct: 636 KLEELAQ 642
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 199/455 (43%), Gaps = 41/455 (9%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
EP+ + WN I+ + + + M + GV D+ TFP + L G
Sbjct: 96 EPD-VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACG 154
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K HC ++ GL +LY N ++ Y C + AR VFD DV SW MI+GY
Sbjct: 155 KKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRM 214
Query: 124 RHVSVACDLFNKMRVEL-EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
+ + +L +M L P SVTL+++L AC ++ ++H Y + ++
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLE 274
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
N+++ YA G + +F + RDV SW ++ Y G++ ++M +
Sbjct: 275 NALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRI 334
Query: 243 SWNIE------------------------------TLTLVISAFAKCGNLSKGEGVHCLV 272
SW I T+ V++A A G+L GE + +
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 273 IKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAI 331
K +D V+ +L+D Y KCG + + ++F ++ + T AM+ G NG EAI
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAI 454
Query: 332 ALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMET 389
+F QMQ D+ I P+ + +L AC + G + R + K + +E +L
Sbjct: 455 KVFFQMQ--DMSIQPDDITYLGVLSACNHSGMVDQAR---KFFAKMRSDHRIEPSLVHYG 509
Query: 390 SILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMI 423
+++M R G + A + +MP+ + I W +++
Sbjct: 510 CMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 194/631 (30%), Positives = 319/631 (50%), Gaps = 20/631 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N +++N I + +G + A+ F + R+ + D FT+ R D G++
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGA-LGFCGERCDLDLGELL 170
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + + GL ++ N +ID Y KC + A +FD RD VSW S+I+GY+
Sbjct: 171 HGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAA 230
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTP---LNVGTQIHGYAVKSGVLMDWSVK 182
+L KM R L + L +L+ACC + + G IH Y K G+ D V+
Sbjct: 231 EEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVR 290
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAG-----LINEMQ 237
++L MYA GS +E LFS + ++V ++N +IS + + ++ A L +MQ
Sbjct: 291 TALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQ 350
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKL 296
G + T ++V+ A + L G +H L+ K F SD+ + ++L++ YA G
Sbjct: 351 R-RGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGST 409
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN--LLD 354
+ +Q F + + +M+ +QN A LF+Q+ + I PE + ++
Sbjct: 410 EDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH--IRPEEYTVSLMMS 467
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
ACA+ AL G + GY +K+ ++ ++TS ++MY + GN+ A VF +
Sbjct: 468 ACADFAALSSGEQIQGYAIKS----GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNP 523
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
DV +++MI HG EAL F M H ++PN FL +L AC H GLV++G K +
Sbjct: 524 DVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYF 583
Query: 475 YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN 534
MK + I P H TC+VDL GR G + +A ++IL W ALL++ VY +
Sbjct: 584 QCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSCRVYKD 643
Query: 535 KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIE 594
+G+ A+RL+ELEP+ +G + LL N+ +G + EE+R M ++ +KK+P S I
Sbjct: 644 SVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIV 703
Query: 595 VKGVSYGFLSGDITHPEAEEIYAALCTLSRV 625
+ ++ F D++HP ++ IY L T+ V
Sbjct: 704 IGNQTHSFAVADLSHPSSQMIYTMLETMDNV 734
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 142/513 (27%), Positives = 246/513 (47%), Gaps = 31/513 (6%)
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
V GK+ H I+ L+ LY N +++ Y KC +G AR++FD M R+++S+ S+I+GY
Sbjct: 64 VLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGY 123
Query: 121 ISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
A +LF + R L+ + T L C L++G +HG V +G+
Sbjct: 124 TQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQV 183
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
+ N ++ MY+ G ++ LF ++RD SWN LIS Y VG L+ +M
Sbjct: 184 FLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHR- 242
Query: 240 EGHSWNIETLTLVISAFAKCGNLS-----KGEGVHCLVIKTGFS-DDVLQTSLLDFYAKC 293
N+ T L A C NL+ KG +HC K G D V++T+LLD YAK
Sbjct: 243 --DGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKN 300
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQ-----NGSFMEAIALFQQMQAEDLVIVPEI 348
G L +++LF + K+ +T AM+SGF+Q + + EA LF MQ L P
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPST 360
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
+ +L AC+ L+ GR +H + KN F + + + ++++ +Y G+ F
Sbjct: 361 FSVVLKACSAAKTLEYGRQIHALICKNNF----QSDEFIGSALIELYALMGSTEDGMQCF 416
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
+D+ +WTSMI+ + A F + ++P T ++SAC+ +S
Sbjct: 417 ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALS 476
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCM----VDLFGRCGMVKEALSIILKMVILPDSRIWGA 524
G +I G+ I+ +D T + + ++ + G + A + ++ V PD + A
Sbjct: 477 SGEQI-----QGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIE-VQNPDVATYSA 530
Query: 525 LLAASGVYG--NKTLGEYTAQRLLELEPDNAGY 555
++++ +G N+ L + + + ++P+ +
Sbjct: 531 MISSLAQHGSANEALNIFESMKTHGIKPNQQAF 563
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 166/339 (48%), Gaps = 22/339 (6%)
Query: 149 VMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR 208
++ Q S + +G HG+ +KS + + N++L MY LF + +R
Sbjct: 52 ILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPER 111
Query: 209 DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVIS-AFAKCG---NLSK 264
++ S+N LIS Y+ +G + L LE N++ + A CG +L
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELF-----LEAREANLKLDKFTYAGALGFCGERCDLDL 166
Query: 265 GEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQ 323
GE +H LV+ G S V L L+D Y+KCGKLD ++ LF + ++ +++SG+++
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 324 NGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA---NLGALKLGRVVHGYLMKNLFNGP 380
G+ E + L +M + L + ++L AC N G ++ G +H Y K
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAK----LG 282
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF-----GSHGFGFEA 435
+E ++ + T++L+MY + G++ A +F MP K+V+ + +MI GF + EA
Sbjct: 283 MEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEA 342
Query: 436 LKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
K F M ++P+ TF +L ACS + + G +I+
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIH 381
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Query: 338 QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR 397
Q ++ + E ++ L A G++ LG++ HG+++K+ + L++ ++LNMY +
Sbjct: 39 QPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKS----SLNPCLYLLNNLLNMYCK 94
Query: 398 GGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSL 457
+ AR +FDRMP +++I++ S+I G+ GF +A++ F E ++ + T+
Sbjct: 95 CRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGA 154
Query: 458 LSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSI 509
L C + G ++ + + G+ + ++D++ +CG + +A+S+
Sbjct: 155 LGFCGERCDLDLG-ELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSL 205
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 192/632 (30%), Positives = 329/632 (52%), Gaps = 14/632 (2%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E + + W I + G A S +MR G+ PV + S +
Sbjct: 106 EMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPG----PVTLLEMLSGVLEIT 161
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
+ H A+ G D D+ N+M++ Y KC +G A+ +FD M RD+VSW +MI+GY
Sbjct: 162 QLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYA 221
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
S ++S L +MR + L P+ T L L +G +H VK+G +D
Sbjct: 222 SVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMH 281
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
+K +++ MY G E + I +DV W ++IS +G + + +EM
Sbjct: 282 LKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQ-S 340
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDIS 299
G + E + V+++ A+ G+ G VH V++ G++ D SL+ YAKCG LD S
Sbjct: 341 GSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKS 400
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR-NLLDACAN 358
+ +F ++ + ++ A++SG+ QN +A+ LF++M+ + + V +LL AC++
Sbjct: 401 LVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSS 460
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
GAL +G+++H ++++ F P ++T++++MY + G + +A+ FD + KDV++
Sbjct: 461 AGALPVGKLIHCIVIRS-FIRPCS---LVDTALVDMYSKCGYLEAAQRCFDSISWKDVVS 516
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
W +I G+G HG G AL+ ++ + M+PN V FL++LS+CSH+G+V +G KI+ SM
Sbjct: 517 WGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMV 576
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
FG+EP +H C+VDL R +++A + P + G +L A G +
Sbjct: 577 RDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVE 636
Query: 539 EYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGV 598
+ + ++EL+P +AG++ L + A+ RW++V E +M LKK PGWS IE+ G
Sbjct: 637 DIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGK 696
Query: 599 SYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
+ F +H +++ + L LSR FG
Sbjct: 697 TTTFFMNHTSH--SDDTVSLLKLLSREMMQFG 726
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 169/561 (30%), Positives = 284/561 (50%), Gaps = 16/561 (2%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
N+T +N I G LSTF M + DTFTFP + +A +S++ + +G
Sbjct: 9 NSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLS-FGLS 67
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H + G D Y +++++ Y K + AR+VF+ M RDVV WT+MI Y
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGI 127
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
V AC L N+MR + ++P VTL+ ML T L +H +AV G D +V NS
Sbjct: 128 VGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNS 184
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
+L +Y + + LF ++ +RD+ SWN +IS Y+ VG+M + L+ M+ +G
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRG-DGLRP 243
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLF 303
+ +T +S +L G +HC ++KTGF D+ L+T+L+ Y KCGK + S ++
Sbjct: 244 DQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
I K + M+SG ++ G +A+ +F +M + E +++ +CA LG+
Sbjct: 304 ETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFD 363
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
LG VHGY++++ + S++ MY + G++ + +F+RM +D+++W ++I
Sbjct: 364 LGASVHGYVLRHGYTLDTPA----LNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAII 419
Query: 424 EGFGSHGFGFEALKYFNLM-MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
G+ + +AL F M + Q +S T +SLL ACS +G + G I+ + F
Sbjct: 420 SGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF- 478
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTA 542
I P T +VD++ +CG + EA + D WG L+A G +G +
Sbjct: 479 IRPCSLVDTALVDMYSKCGYL-EAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIY 537
Query: 543 QRLLE--LEPDNAGYHTLLSN 561
L +EP++ + +LS+
Sbjct: 538 SEFLHSGMEPNHVIFLAVLSS 558
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 303 bits (775), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 197/626 (31%), Positives = 326/626 (52%), Gaps = 14/626 (2%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY 62
E+ +N + WN+ I G S+L + + V + +F A S ++ +
Sbjct: 232 EDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQ-SENSGF 290
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G+ HC ++MGL D Y C +++ Y KC +G A VF ++ + + W +M+A Y
Sbjct: 291 GRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE 350
Query: 123 ERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
+ A DLF MR + + P+S TL ++ C N G +H K + ++
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTI 410
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ---- 237
++++L +Y+ G + L+F + ++D+ +W LIS G + +M+
Sbjct: 411 ESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDD 470
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKL 296
SL+ S + +T V +A A L G VH +IKTG +V + +SL+D Y+KCG
Sbjct: 471 SLKPDS---DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLP 527
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC 356
++++++F + ++ + +M+S + +N +I LF M ++ + ++L A
Sbjct: 528 EMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAI 587
Query: 357 ANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
++ +L G+ +HGY ++ + + H++ ++++MY++ G A +F +M K +
Sbjct: 588 SSTASLLKGKSLHGYTLRL----GIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSL 643
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
I W MI G+GSHG AL F+ M + P+ VTFLSL+SAC+HSG V EG I+
Sbjct: 644 ITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEF 703
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
MK +GIEP ++H+ MVDL GR G+++EA S I M I DS IW LL+AS + N
Sbjct: 704 MKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVE 763
Query: 537 LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVK 596
LG +A++LL +EP+ + L N+ AG NE +L M EK L K+PG S IEV
Sbjct: 764 LGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823
Query: 597 GVSYGFLSGDITHPEAEEIYAALCTL 622
+ F SG + P EI+ L L
Sbjct: 824 DRTNVFFSGGSSSPMKAEIFNVLNRL 849
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 158/575 (27%), Positives = 275/575 (47%), Gaps = 41/575 (7%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY---- 62
+ WN I + +F + F++M GV D F+ +V +S M + +
Sbjct: 132 DVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIV---VSVMCKEGNFRREE 188
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVF-DLMLHRDVVSWTSMIAGYI 121
GK H ++ LD D + +ID Y K A RVF ++ +VV W MI G+
Sbjct: 189 GKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFG 248
Query: 122 SERHVSVACDLFNKMRVELEPNSVTLIVM-----LQACCASTPLNVGTQIHGYAVKSGVL 176
+ DL+ + + NSV L+ L AC S G QIH VK G+
Sbjct: 249 GSGICESSLDLY----MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLH 304
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG---DMMRVAGLI 233
D V S+L MY+ G E E +FS + + + WN +++ Y+ + + G +
Sbjct: 305 NDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFM 364
Query: 234 NEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAK 292
+ L + TL+ VIS + G + G+ VH + K S ++++LL Y+K
Sbjct: 365 RQKSVLP----DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSK 420
Query: 293 CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVP--EIWR 350
CG + +F+ + K + G+++SG +NG F EA+ +F M+ +D + P +I
Sbjct: 421 CGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMT 480
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
++ +ACA L AL+ G VHG ++K G V N+ + +S++++Y + G A VF
Sbjct: 481 SVTNACAGLEALRFGLQVHGSMIK---TGLVL-NVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
M ++++AW SMI + + ++ FNLM+ + P+SV+ S+L A S + + +G
Sbjct: 537 MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKG 596
Query: 471 CKIY-YSMKWGFGIEPALDH-HTCMVDLFGRCGMVKEALSIILKMVILPDSRI-WGALLA 527
++ Y+++ G P+ H ++D++ +CG K A +I KM S I W ++
Sbjct: 597 KSLHGYTLRLGI---PSDTHLKNALIDMYVKCGFSKYAENIFKKMQ--HKSLITWNLMIY 651
Query: 528 ASGVYGN--KTLGEYTAQRLLELEPDNAGYHTLLS 560
G +G+ L + + PD+ + +L+S
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLIS 686
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 145/525 (27%), Positives = 250/525 (47%), Gaps = 38/525 (7%)
Query: 12 NLTIRTHVDLGQFHSALSTFKKMRQMGVPHDT--FTFPVVNRALSSMRADAVYGKMTHCV 69
N IR + G++ AL + K P T FTFP + +A S++ + YGK H
Sbjct: 28 NSGIRALIQKGEYLQALHLYSK-HDGSSPFWTSVFTFPSLLKACSAL-TNLSYGKTIHGS 85
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFD-------LMLHRDVVSWTSMIAGYIS 122
+ +G D + ++++ YVKC + A +VFD + RDV W SMI GY
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 123 ERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNV--GTQIHGYAVKSGVLMDW 179
R F +M V + P++ +L +++ C G QIHG+ +++ + D
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEI-NKRDVASWNILISFYSMVG------DMMRVAGL 232
+K +++ MY G + + +F EI +K +V WN++I + G D+ +A
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAK- 264
Query: 233 INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYA 291
N L S+ T + A ++ N G +HC V+K G +D + TSLL Y+
Sbjct: 265 -NNSVKLVSTSF-----TGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
KCG + + +F + K AM++ + +N A+ LF M+ + ++ N
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
++ C+ LG G+ VH LF P++ +E+++L +Y + G A VF M
Sbjct: 379 VISCCSVLGLYNYGKSVHA----ELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSM 434
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM--EHRMQPNSVTFLSLLSACSHSGLVSE 469
KD++AW S+I G +G EALK F M + ++P+S S+ +AC+ +
Sbjct: 435 EEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRF 494
Query: 470 GCKIYYSM-KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
G +++ SM K G + + + ++DL+ +CG+ + AL + M
Sbjct: 495 GLQVHGSMIKTGLVLNVFVG--SSLIDLYSKCGLPEMALKVFTSM 537
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 157/337 (46%), Gaps = 35/337 (10%)
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLF 303
++ T ++ A + NLS G+ +H V+ G+ D + TSL++ Y KCG LD +VQ+F
Sbjct: 59 SVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118
Query: 304 -------REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM-------QAEDLVIVPEIW 349
+ + +M+ G+ + F E + F++M A L IV +
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV- 177
Query: 350 RNLLDACANLGALKL--GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
C G + G+ +HG++++N ++ + ++T++++MY + G A V
Sbjct: 178 -----MCKE-GNFRREEGKQIHGFMLRN----SLDTDSFLKTALIDMYFKFGLSIDAWRV 227
Query: 408 FDRMPVK-DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGL 466
F + K +V+ W MI GFG G +L + L + ++ S +F L ACS S
Sbjct: 228 FVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSEN 287
Query: 467 VSEGCKIYYS-MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGAL 525
G +I+ +K G +P + T ++ ++ +CGMV EA + V+ IW A+
Sbjct: 288 SGFGRQIHCDVVKMGLHNDPYV--CTSLLSMYSKCGMVGEA-ETVFSCVVDKRLEIWNAM 344
Query: 526 LA--ASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLS 560
+A A YG L + R + PD+ ++S
Sbjct: 345 VAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 160/461 (34%), Positives = 275/461 (59%), Gaps = 8/461 (1%)
Query: 165 QIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG 224
Q H + VK G+ D V+NS++ Y+ G + LF +DV +W +I + G
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNG 183
Query: 225 DMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF--SDDVL 282
EM+ G + N T+ V+ A K ++ G VH L ++TG D +
Sbjct: 184 SASEAMVYFVEMKK-TGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 283 QTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDL 342
+SL+D Y KC D + ++F E+ ++ +T A+++G++Q+ F + + +F++M D+
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 343 VIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNIS 402
+ ++L ACA++GAL GR VH Y++KN +E N T+++++Y++ G +
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKN----SIEINTTAGTTLIDLYVKCGCLE 358
Query: 403 SARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
A VF+R+ K+V WT+MI GF +HG+ +A F M+ + PN VTF+++LSAC+
Sbjct: 359 EAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA 418
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIW 522
H GLV EG +++ SMK F +EP DH+ CMVDLFGR G+++EA ++I +M + P + +W
Sbjct: 419 HGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVW 478
Query: 523 GALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEK 582
GAL + ++ + LG+Y A R+++L+P ++G +TLL+N+ + + W+EV +R++M ++
Sbjct: 479 GALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQ 538
Query: 583 DLKKKPGWSCIEVKGVSYGFLSGDITHP-EAEEIYAALCTL 622
+ K PG+S IEVKG F++ D P E++++Y L T+
Sbjct: 539 QVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTV 579
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 116/402 (28%), Positives = 204/402 (50%), Gaps = 13/402 (3%)
Query: 31 FKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYV 90
++ MR+ GV TFP + +A+ +R + H V + GLD D + N++I Y
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIV--KFGLDSDPFVRNSLISGYS 149
Query: 91 KCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIV 149
A R+FD +DVV+WT+MI G++ S A F +M + + N +T++
Sbjct: 150 SSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVS 209
Query: 150 MLQACCASTPLNVGTQIHGYAVKSG-VLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR 208
+L+A + G +HG +++G V D + +S++ MY ++ + +F E+ R
Sbjct: 210 VLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR 269
Query: 209 DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV 268
+V +W LI+ Y + + EM + + N +TL+ V+SA A G L +G V
Sbjct: 270 NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV-APNEKTLSSVLSACAHVGALHRGRRV 328
Query: 269 HCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSF 327
HC +IK + T+L+D Y KCG L+ ++ +F +H K+ T AM++GF +G
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYA 388
Query: 328 MEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHM 387
+A LF M + + + +L ACA+ G ++ GR + MK FN +E
Sbjct: 389 RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFN--MEPKADH 445
Query: 388 ETSILNMYIRGGNISSARAVFDRMPVKDV-IAWTSMIEGFGS 428
+++++ R G + A+A+ +RMP++ + W ++ FGS
Sbjct: 446 YACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGAL---FGS 484
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 172/374 (45%), Gaps = 38/374 (10%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E + + W I V G A+ F +M++ GV + T V +A + D +G
Sbjct: 165 EDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVE-DVRFG 223
Query: 64 KMTHCVAIQMG-LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
+ H + ++ G + D++ ++++D Y KC C A++VFD M R+VV+WT++IAGY+
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQ 283
Query: 123 ERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
R +F +M + ++ PN TL +L AC L+ G ++H Y +K+ + ++ +
Sbjct: 284 SRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA 343
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
+++ +Y G EE L+F +++++V +W +I+ ++ G L M L
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTM--LSS 401
Query: 242 H-SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISV 300
H S N T V+SA A G + +G + F + G+ ++
Sbjct: 402 HVSPNEVTFMAVLSACAHGGLVEEGRRL--------------------FLSMKGRFNMEP 441
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
+ H+ + L F + G EA AL ++M E +V W L +C
Sbjct: 442 ---KADHYACMVDL------FGRKGLLEEAKALIERMPMEPTNVV---WGALFGSCLLHK 489
Query: 361 ALKLGRVVHGYLMK 374
+LG+ ++K
Sbjct: 490 DYELGKYAASRVIK 503
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 3/155 (1%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P+ N + W I +V F + F++M + V + T V A + + A
Sbjct: 264 DEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA-L 322
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
G+ HC I+ ++++ T+ID YVKC C+ A VF+ + ++V +WT+MI G+
Sbjct: 323 HRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGF 382
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQAC 154
+ + A DLF M + PN VT + +L AC
Sbjct: 383 AAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 185/551 (33%), Positives = 301/551 (54%), Gaps = 19/551 (3%)
Query: 87 DFYVKCWCIG---CARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEP 142
D C IG AR+VFD + R V + SMI Y ++ L+++M E ++P
Sbjct: 55 DLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQP 114
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
+S T + ++AC + L G + AV G D V +SVL +Y G +E E+LF
Sbjct: 115 DSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLF 174
Query: 203 SEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNL 262
++ KRDV W +++ ++ G ++ EMQ+ EG + + ++ A G+
Sbjct: 175 GKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQN-EGFGRDRVVMLGLLQASGDLGDT 233
Query: 263 SKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGF 321
G VH + +TG + V++TSL+D YAK G ++++ ++F + FK+ ++ G+++SGF
Sbjct: 234 KMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGF 293
Query: 322 IQNGSFMEAIALFQQMQA----EDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLF 377
QNG +A +MQ+ DLV + + L AC+ +G+LK GR+VH Y++K
Sbjct: 294 AQNGLANKAFEAVVEMQSLGFQPDLVTLVGV----LVACSQVGSLKTGRLVHCYILKRHV 349
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK 437
V T++++MY + G +SS+R +F+ + KD++ W +MI +G HG G E +
Sbjct: 350 LDRVTA-----TALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVS 404
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLF 497
F M E ++P+ TF SLLSA SHSGLV +G + M + I+P+ H+ C++DL
Sbjct: 405 LFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLL 464
Query: 498 GRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHT 557
R G V+EAL +I + IW ALL+ + N ++G+ A ++L+L PD+ G T
Sbjct: 465 ARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQT 524
Query: 558 LLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYA 617
L+SN A+A +W EV ++R+ M ++K PG+S IEV G FL D++H E +
Sbjct: 525 LVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHMLQ 584
Query: 618 ALCTLSRVTQD 628
L L +D
Sbjct: 585 VLRNLKTEIRD 595
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/413 (29%), Positives = 206/413 (49%), Gaps = 24/413 (5%)
Query: 164 TQIHGYAVKSGVLMDW-SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSM 222
TQIH + + +G L++ S+ ++ G +F E+ +R V+ +N +I YS
Sbjct: 34 TQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSR 93
Query: 223 VGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVL 282
+ V L ++M + E + T T+ I A L KGE V C + G+ +DV
Sbjct: 94 GKNPDEVLRLYDQMIA-EKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 283 Q-TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAED 341
+S+L+ Y KCGK+D + LF ++ + I M++GF Q G ++A+ +++MQ E
Sbjct: 153 VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG 212
Query: 342 LVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNI 401
+ LL A +LG K+GR VHGY L+ + N+ +ETS+++MY + G I
Sbjct: 213 FGRDRVVMLGLLQASGDLGDTKMGRSVHGY----LYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 402 SSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
A VF RM K ++W S+I GF +G +A + M QP+ VT + +L AC
Sbjct: 269 EVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVAC 328
Query: 462 SHSGLVSEGCKIY-YSMKWGFGIEPALDH--HTCMVDLFGRCGMVKEALSIILKMVILPD 518
S G + G ++ Y +K LD T ++D++ +CG + + I + V D
Sbjct: 329 SQVGSLKTGRLVHCYILK-----RHVLDRVTATALMDMYSKCGALSSSRE-IFEHVGRKD 382
Query: 519 SRIWGALLAASGVYGNKTLGEYTAQRLLEL-----EPDNAGYHTLLSNVKASA 566
W +++ G++GN G+ L++ EPD+A + +LLS + S
Sbjct: 383 LVCWNTMISCYGIHGN---GQEVVSLFLKMTESNIEPDHATFASLLSALSHSG 432
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/405 (25%), Positives = 201/405 (49%), Gaps = 9/405 (2%)
Query: 28 LSTFKKMRQMGVPHDTFTFPVVNRA-LSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMI 86
L + +M + D+ TF + +A LS + + G+ C A+ G D++ C++++
Sbjct: 101 LRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEK--GEAVWCKAVDFGYKNDVFVCSSVL 158
Query: 87 DFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSV 145
+ Y+KC + A +F M RDV+ WT+M+ G+ A + + +M+ E + V
Sbjct: 159 NLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRV 218
Query: 146 TLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI 205
++ +LQA +G +HGY ++G+ M+ V+ S++ MYA G E +FS +
Sbjct: 219 VMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM 278
Query: 206 NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG 265
+ SW LIS ++ G + + EMQSL G ++ TL V+ A ++ G+L G
Sbjct: 279 MFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSL-GFQPDLVTLVGVLVACSQVGSLKTG 337
Query: 266 EGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNG 325
VHC ++K D V T+L+D Y+KCG L S ++F + K + M+S + +G
Sbjct: 338 RLVHCYILKRHVLDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHG 397
Query: 326 SFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNL 385
+ E ++LF +M ++ + +LL A ++ G ++ G+ ++ P E +
Sbjct: 398 NGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHY 457
Query: 386 HMETSILNMYIRGGNISSARAVFDRMPVKDVIA-WTSMIEGFGSH 429
++++ R G + A + + + + + W +++ G +H
Sbjct: 458 ---VCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINH 499
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 320/629 (50%), Gaps = 13/629 (2%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMR--ADAVYGK 64
+T++WN + G + F MR+ HD V+ LS + +G+
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRF---HDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H + ++MG D + CNT++ Y A VF M +D++SW S++A ++++
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324
Query: 125 HVSVACDLFNKMRVELEP-NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
A L M + N VT L AC G +HG V SG+ + + N
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 384
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
+++ MY G E + ++ +RDV +WN LI Y+ D + M+ +EG S
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR-VEGVS 443
Query: 244 WNIETLTLVISAFAKCGNL-SKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQ 301
N T+ V+SA G+L +G+ +H ++ GF SD+ ++ SL+ YAKCG L S
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
LF + ++ IT AM++ +G E + L +M++ + + + L A A L
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
L+ G+ +HG +K F E + + + +MY + G I + + + +W
Sbjct: 564 LEEGQQLHGLAVKLGF----EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 619
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
+I G HG+ E F+ M+E ++P VTF+SLL+ACSH GLV +G Y + F
Sbjct: 620 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDF 679
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYT 541
G+EPA++H C++DL GR G + EA + I KM + P+ +W +LLA+ ++GN G
Sbjct: 680 GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKA 739
Query: 542 AQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYG 601
A+ L +LEP++ + L SN+ A+ GRW +VE +R++M K++KKK S +++K
Sbjct: 740 AENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 799
Query: 602 FLSGDITHPEAEEIYAALCTLSRVTQDFG 630
F GD THP+ EIYA L + ++ ++ G
Sbjct: 800 FGIGDRTHPQTMEIYAKLEDIKKLIKESG 828
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/536 (25%), Positives = 260/536 (48%), Gaps = 20/536 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++WN + V +G + + F+KM +G+ +F + A + G
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + GL D+Y ++ Y + C+R+VF+ M R+VVSWTS++ GY +
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 124
Query: 127 SVACDLFNKMRVE---LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
D++ MR E NS++L++ +C ++G QI G VKSG+ +V+N
Sbjct: 125 EEVIDIYKGMRGEGVGCNENSMSLVI--SSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
S++ M G+ + +F ++++RD SWN + + Y+ G + + + M+
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQL 302
N T++ ++S + G G+H LV+K GF V + +LL YA G+ + +
Sbjct: 243 -NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
F+++ K I+ ++M+ F+ +G ++A+ L M + + + + L AC
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361
Query: 363 KLGRVVHGY-LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
+ GR++HG ++ LF + GN ++++MY + G +S +R V +MP +DV+AW +
Sbjct: 362 EKGRILHGLVVVSGLFYNQIIGN-----ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNA 416
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
+I G+ +AL F M + N +T +S+LSAC G + E K ++
Sbjct: 417 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 476
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSR---IWGALLAASGVYGN 534
G E ++ ++ +CG + + + + D+R W A+LAA+ +G+
Sbjct: 477 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGL----DNRNIITWNAMLAANAHHGH 528
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 217/462 (46%), Gaps = 15/462 (3%)
Query: 108 RDVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPL-NVGTQ 165
R+ VSW +M++G + + F KM + ++P+S + ++ AC S + G Q
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63
Query: 166 IHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGD 225
+HG+ KSG+L D V ++L +Y G +F E+ R+V SW L+ YS G+
Sbjct: 64 VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGE 123
Query: 226 MMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQT 284
V + M+ EG N +++LVIS+ + S G + V+K+G + ++
Sbjct: 124 PEEVIDIYKGMRG-EGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 182
Query: 285 SLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVI 344
SL+ G +D + +F ++ + I+ ++ + + QNG E+ +F M+ +
Sbjct: 183 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 242
Query: 345 VPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSA 404
LL ++ K GR +HG ++K F+ V + ++L MY G A
Sbjct: 243 NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV----CVCNTLLRMYAGAGRSVEA 298
Query: 405 RAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHS 464
VF +MP KD+I+W S++ F + G +AL M+ N VTF S L+AC
Sbjct: 299 NLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTP 358
Query: 465 GLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGA 524
+G +I + + G+ +V ++G+ G + E+ ++L+M D W A
Sbjct: 359 DFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP-RRDVVAWNA 416
Query: 525 LLA--ASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKA 564
L+ A +K L + R +E ++ Y T++S + A
Sbjct: 417 LIGGYAEDEDPDKALAAFQTMR---VEGVSSNYITVVSVLSA 455
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 301 bits (772), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 194/629 (30%), Positives = 320/629 (50%), Gaps = 13/629 (2%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMR--ADAVYGK 64
+T++WN + G + F MR+ HD V+ LS + +G+
Sbjct: 225 DTISWNSIAAAYAQNGHIEESFRIFSLMRRF---HDEVNSTTVSTLLSVLGHVDHQKWGR 281
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H + ++MG D + CNT++ Y A VF M +D++SW S++A ++++
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341
Query: 125 HVSVACDLFNKMRVELEP-NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
A L M + N VT L AC G +HG V SG+ + + N
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 401
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
+++ MY G E + ++ +RDV +WN LI Y+ D + M+ +EG S
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR-VEGVS 460
Query: 244 WNIETLTLVISAFAKCGNL-SKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQ 301
N T+ V+SA G+L +G+ +H ++ GF SD+ ++ SL+ YAKCG L S
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
LF + ++ IT AM++ +G E + L +M++ + + + L A A L
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
L+ G+ +HG +K F E + + + +MY + G I + + + +W
Sbjct: 581 LEEGQQLHGLAVKLGF----EHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNI 636
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
+I G HG+ E F+ M+E ++P VTF+SLL+ACSH GLV +G Y + F
Sbjct: 637 LISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDF 696
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYT 541
G+EPA++H C++DL GR G + EA + I KM + P+ +W +LLA+ ++GN G
Sbjct: 697 GLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKA 756
Query: 542 AQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYG 601
A+ L +LEP++ + L SN+ A+ GRW +VE +R++M K++KKK S +++K
Sbjct: 757 AENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSS 816
Query: 602 FLSGDITHPEAEEIYAALCTLSRVTQDFG 630
F GD THP+ EIYA L + ++ ++ G
Sbjct: 817 FGIGDRTHPQTMEIYAKLEDIKKLIKESG 845
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 139/536 (25%), Positives = 260/536 (48%), Gaps = 20/536 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++WN + V +G + + F+KM +G+ +F + A + G
Sbjct: 22 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 81
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + GL D+Y ++ Y + C+R+VF+ M R+VVSWTS++ GY +
Sbjct: 82 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 141
Query: 127 SVACDLFNKMRVE---LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
D++ MR E NS++L++ +C ++G QI G VKSG+ +V+N
Sbjct: 142 EEVIDIYKGMRGEGVGCNENSMSLVI--SSCGLLKDESLGRQIIGQVVKSGLESKLAVEN 199
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
S++ M G+ + +F ++++RD SWN + + Y+ G + + + M+
Sbjct: 200 SLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV 259
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQL 302
N T++ ++S + G G+H LV+K GF V + +LL YA G+ + +
Sbjct: 260 -NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 318
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
F+++ K I+ ++M+ F+ +G ++A+ L M + + + + L AC
Sbjct: 319 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 378
Query: 363 KLGRVVHGY-LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
+ GR++HG ++ LF + GN ++++MY + G +S +R V +MP +DV+AW +
Sbjct: 379 EKGRILHGLVVVSGLFYNQIIGN-----ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNA 433
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
+I G+ +AL F M + N +T +S+LSAC G + E K ++
Sbjct: 434 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 493
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSR---IWGALLAASGVYGN 534
G E ++ ++ +CG + + + + D+R W A+LAA+ +G+
Sbjct: 494 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGL----DNRNIITWNAMLAANAHHGH 545
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 129/481 (26%), Positives = 227/481 (47%), Gaps = 15/481 (3%)
Query: 89 YVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTL 147
Y K + AR +FD+M R+ VSW +M++G + + F KM + ++P+S +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 148 IVMLQACCASTPL-NVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEIN 206
++ AC S + G Q+HG+ KSG+L D V ++L +Y G +F E+
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 207 KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGE 266
R+V SW L+ YS G+ V + M+ EG N +++LVIS+ + S G
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRG-EGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 267 GVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNG 325
+ V+K+G + ++ SL+ G +D + +F ++ + I+ ++ + + QNG
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 326 SFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNL 385
E+ +F M+ + LL ++ K GR +HG ++K F+ V
Sbjct: 241 HIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVV---- 296
Query: 386 HMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH 445
+ ++L MY G A VF +MP KD+I+W S++ F + G +AL M+
Sbjct: 297 CVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS 356
Query: 446 RMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKE 505
N VTF S L+AC +G +I + + G+ +V ++G+ G + E
Sbjct: 357 GKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 415
Query: 506 ALSIILKMVILPDSRIWGALLA--ASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVK 563
+ ++L+M D W AL+ A +K L + R +E ++ Y T++S +
Sbjct: 416 SRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMR---VEGVSSNYITVVSVLS 471
Query: 564 A 564
A
Sbjct: 472 A 472
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 159/356 (44%), Gaps = 35/356 (9%)
Query: 188 MYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
MY G + LF + R+ SWN ++S VG + +M L I+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDL-----GIK 55
Query: 248 TLTLVISAF-AKCGN----LSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQ 301
+ VI++ CG +G VH V K+G DV + T++L Y G + S +
Sbjct: 56 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 115
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+F E+ ++ ++ ++M G+ G E I +++ M+ E + ++ +C L
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
LGR + G ++K+ +E L +E S+++M GN+ A +FD+M +D I+W S
Sbjct: 176 ESLGRQIIGQVVKS----GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNS 231
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
+ + +G E+ + F+LM + NS T +LLS H KWG
Sbjct: 232 IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD----------HQKWGR 281
Query: 482 GI-----EPALDHHTC----MVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
GI + D C ++ ++ G EA +++ K + D W +L+A+
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEA-NLVFKQMPTKDLISWNSLMAS 336
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 301 bits (771), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 198/600 (33%), Positives = 312/600 (52%), Gaps = 27/600 (4%)
Query: 5 PN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRAL--SSMRADAV 61
PN + ++W + + + SAL FK+MR GV + T V A SM +A
Sbjct: 312 PNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEA- 370
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVF---DLMLHRDVVSWTSMIA 118
H + G LD +I Y K I + +VF D + +++V+ MI
Sbjct: 371 --SQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMIT 426
Query: 119 GYISERHVSVACDLFNKMRVE---LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGV 175
+ + A LF +M E + SV ++ + C LN+G Q+HGY +KSG+
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDC-----LNLGKQVHGYTLKSGL 481
Query: 176 LMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINE 235
++D +V +S+ +Y+ GS EE LF I +D A W +IS ++ G + GL +E
Sbjct: 482 VLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSE 541
Query: 236 MQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCG 294
M +G S + TL V++ + +L +G+ +H ++ G + L ++L++ Y+KCG
Sbjct: 542 MLD-DGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
L ++ Q++ + ++ +++SG+ Q+G + LF+ M + ++L
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 355 ACANLGALKLGRVVHGYLMK-NLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV 413
A A LG VH Y+ K L P G +S+L MY + G+I F ++
Sbjct: 661 AAALSDESSLGAQVHAYITKIGLCTEPSVG-----SSLLTMYSKFGSIDDCCKAFSQING 715
Query: 414 KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKI 473
D+IAWT++I + HG EAL+ +NLM E +P+ VTF+ +LSACSH GLV E
Sbjct: 716 PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFH 775
Query: 474 YYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
SM +GIEP H+ CMVD GR G ++EA S I M I PD+ +WG LLAA ++G
Sbjct: 776 LNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHG 835
Query: 534 NKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
LG+ A++ +ELEP +AG + LSN+ A G W+EVEE R+ M ++K+PGWS +
Sbjct: 836 EVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 148/564 (26%), Positives = 274/564 (48%), Gaps = 27/564 (4%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N WN I + + + F +M D++T+ V A +S+ +GK+
Sbjct: 215 NVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLE-KLRFGKVV 273
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
I+ G + D++ C ++D Y KC + A VF + + VVSWT M++GY
Sbjct: 274 QARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDA 332
Query: 127 SVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
A ++F +MR +E N+ T+ ++ AC + + +Q+H + KSG +D SV ++
Sbjct: 333 FSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAAL 392
Query: 186 LRMYADKGSTEEVELLF---SEINKRDVASWNILISFYSMVGDMMRVAGLINEM--QSLE 240
+ MY+ G + E +F +I ++++ N++I+ +S + L M + L
Sbjct: 393 ISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDIS 299
+++ +L V+ C NL G+ VH +K+G D+ + +SL Y+KCG L+ S
Sbjct: 451 TDEFSVCSLLSVL----DCLNL--GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEES 504
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+LF+ I FK +M+SGF + G EAI LF +M + +L C++
Sbjct: 505 YKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSH 564
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
+L G+ +HGY ++ ++ + + ++++NMY + G++ AR V+DR+P D ++
Sbjct: 565 PSLPRGKEIHGYTLR----AGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSC 620
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMK 478
+S+I G+ HG + F M+ +S S+L A + S S G +++ Y K
Sbjct: 621 SSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITK 680
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG--NKT 536
G EP++ + ++ ++ + G + + + PD W AL+A+ +G N+
Sbjct: 681 IGLCTEPSVG--SSLLTMYSKFGSIDDCCK-AFSQINGPDLIAWTALIASYAQHGKANEA 737
Query: 537 LGEYTAQRLLELEPDNAGYHTLLS 560
L Y + +PD + +LS
Sbjct: 738 LQVYNLMKEKGFKPDKVTFVGVLS 761
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 221/476 (46%), Gaps = 42/476 (8%)
Query: 75 LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFN 134
L D++ +++ +Y + A ++FD + DVVS MI+GY R + F+
Sbjct: 80 LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 135 KMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKG 193
KM + E N ++ ++ AC A + + +K G V+++++ +++
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 194 STEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM----QSLEGHSWNIETL 249
E+ +F + +V WN +I+ + V L +EM Q + ++++
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYS---- 255
Query: 250 TLVISAFAKCGNLSK---GEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREI 306
S A C +L K G+ V VIK G D + T+++D YAKCG + ++++F I
Sbjct: 256 ----SVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRI 311
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
S ++ M+SG+ ++ A+ +F++M+ + I +++ AC +
Sbjct: 312 PNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEAS 371
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSI----LNMYIRGGNISSARAVF---DRMPVKDVIAW 419
VH ++ K+ F ++++S+ ++MY + G+I + VF D + ++++
Sbjct: 372 QVHAWVFKSGF--------YLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-- 421
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSA--CSHSGLVSEGCKIYYSM 477
MI F +A++ F M++ ++ + + SLLS C + G G Y++
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHG----YTL 477
Query: 478 KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
K G ++ L + + L+ +CG ++E+ + + + D+ W ++++ YG
Sbjct: 478 KSGLVLD--LTVGSSLFTLYSKCGSLEESYK-LFQGIPFKDNACWASMISGFNEYG 530
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 301 bits (771), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 301/554 (54%), Gaps = 47/554 (8%)
Query: 102 FDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELE-PNSVTLIVMLQACCASTPL 160
F + V++W S+I + + S A F +MR P+ +L++C L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 161 NVGTQIHGYAVKSGVLMDWSVKNSVLRMYAD----------------------------- 191
G +HG+ V+ G+ D N+++ MYA
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 192 KGST-------EEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQS--LEGH 242
K T + V +F + ++DV S+N +I+ Y+ G ++ EM + L+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQ 301
S+ TL+ V+ F++ ++ KG+ +H VI+ G DV + +SL+D YAK +++ S +
Sbjct: 242 SF---TLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+F ++ + I+ ++++G++QNG + EA+ LF+QM + + +++ ACA+L
Sbjct: 299 VFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLAT 358
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
L LG+ +HGY+++ F N+ + +++++MY + GNI +AR +FDRM V D ++WT+
Sbjct: 359 LHLGKQLHGYVLRGGFGS----NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTA 414
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
+I G HG G EA+ F M ++PN V F+++L+ACSH GLV E + SM +
Sbjct: 415 IIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 474
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYT 541
G+ L+H+ + DL GR G ++EA + I KM + P +W LL++ V+ N L E
Sbjct: 475 GLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKV 534
Query: 542 AQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYG 601
A+++ ++ +N G + L+ N+ AS GRW E+ +LR M +K L+KKP S IE+K ++G
Sbjct: 535 AEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHG 594
Query: 602 FLSGDITHPEAEEI 615
F+SGD +HP ++I
Sbjct: 595 FVSGDRSHPSMDKI 608
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 186/390 (47%), Gaps = 40/390 (10%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHC 68
+AW IR D F AL++F +MR G D FP V ++ + M D +G+ H
Sbjct: 71 LAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT-MMMDLRFGESVHG 129
Query: 69 VAIQMGLDLDLYFCNTMIDFYVKCWCIGC------------------------------- 97
+++G+D DLY N +++ Y K +G
Sbjct: 130 FIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMP 189
Query: 98 -----ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVML 151
RRVF++M +DVVS+ ++IAGY A + +M +L+P+S TL +L
Sbjct: 190 FGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVL 249
Query: 152 QACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVA 211
+ G +IHGY ++ G+ D + +S++ MYA E+ E +FS + RD
Sbjct: 250 PIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGI 309
Query: 212 SWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCL 271
SWN L++ Y G L +M + + + + VI A A L G+ +H
Sbjct: 310 SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAV-AFSSVIPACAHLATLHLGKQLHGY 368
Query: 272 VIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEA 330
V++ GF ++ + ++L+D Y+KCG + + ++F ++ ++ A++ G +G EA
Sbjct: 369 VLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEA 428
Query: 331 IALFQQMQAEDLVIVPEIWRNLLDACANLG 360
++LF++M+ + + + +L AC+++G
Sbjct: 429 VSLFEEMKRQGVKPNQVAFVAVLTACSHVG 458
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 142/295 (48%), Gaps = 5/295 (1%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+ +++N I + G + AL ++M + D+FT V S D + GK
Sbjct: 205 KDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY-VDVIKGKE 263
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H I+ G+D D+Y ++++D Y K I + RVF + RD +SW S++AGY+
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGR 323
Query: 126 VSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
+ A LF +M +++P +V ++ AC L++G Q+HGY ++ G + + ++
Sbjct: 324 YNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASA 383
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
++ MY+ G+ + +F +N D SW +I +++ G L EM+ +G
Sbjct: 384 LVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR-QGVKP 442
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKT-GFSDDVLQ-TSLLDFYAKCGKLD 297
N V++A + G + + G + K G + ++ ++ D + GKL+
Sbjct: 443 NQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 145/336 (43%), Gaps = 46/336 (13%)
Query: 263 SKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFI 322
S+ + +H I+T + ++ Y L ++ LF+ + + +++ F
Sbjct: 22 SQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 323 QNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK-----NLF 377
F +A+A F +M+A ++ ++L +C + L+ G VHG++++ +L+
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLY 141
Query: 378 NGPVEGNLHMETSILNMYIRGGN---------------------------ISSARAVFDR 410
G N++ + + I GN I S R VF+
Sbjct: 142 TGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEV 201
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
MP KDV+++ ++I G+ G +AL+ M ++P+S T S+L S V +G
Sbjct: 202 MPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG 261
Query: 471 CKIYYSMKWGFGIEPALDHH----TCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALL 526
+I+ G+ I +D + +VD++ + ++++ + ++ D W +L+
Sbjct: 262 KEIH-----GYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRL-YCRDGISWNSLV 315
Query: 527 AA---SGVYGNKTLGEYTAQRLLELEPDNAGYHTLL 559
A +G Y N+ L + +++P + +++
Sbjct: 316 AGYVQNGRY-NEALRLFRQMVTAKVKPGAVAFSSVI 350
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 195/620 (31%), Positives = 318/620 (51%), Gaps = 16/620 (2%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N +++ I + GQ A+ + KM Q + D F F + +A +S +D GK
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS-SSDVGLGKQL 190
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H I++ L N +I YV+ + A RVF + +D++SW+S+IAG+ +
Sbjct: 191 HAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGF---SQL 247
Query: 127 SVACDLFNKMRVEL-----EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
+ + ++ L PN L+AC + + G+QIHG +KS + +
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIA 307
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
S+ MYA G +F +I + D ASWN++I+ + G + ++M+S G
Sbjct: 308 GCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRS-SG 366
Query: 242 HSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISV 300
+ +L ++ A K LS+G +H +IK GF +D + SLL Y C L
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 301 QLFREIHFKS-YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
LF + + ++ +++ +Q+ +E + LF+ M + NLL C +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
+LKLG VH Y +K P + ++ +++MY + G++ AR +FD M +DV++W
Sbjct: 487 SSLKLGSQVHCYSLKTGL-APEQ---FIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSW 542
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKW 479
+++I G+ GFG EAL F M ++PN VTF+ +L+ACSH GLV EG K+Y +M+
Sbjct: 543 STLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQT 602
Query: 480 GFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGE 539
GI P +H +C+VDL R G + EA I +M + PD +W LL+A GN L +
Sbjct: 603 EHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQ 662
Query: 540 YTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVS 599
A+ +L+++P N+ H LL ++ AS+G W LR M + D+KK PG S IE++
Sbjct: 663 KAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKI 722
Query: 600 YGFLSGDITHPEAEEIYAAL 619
+ F + DI HPE ++IY L
Sbjct: 723 HIFFAEDIFHPERDDIYTVL 742
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 134/519 (25%), Positives = 240/519 (46%), Gaps = 22/519 (4%)
Query: 52 ALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVV 111
A SS R+ A G+ H + D N ++ Y KC + AR VFD M R++V
Sbjct: 76 ACSSSRSLA-QGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLV 134
Query: 112 SWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYA 170
S+TS+I GY + A L+ KM E L P+ +++AC +S+ + +G Q+H
Sbjct: 135 SYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQV 194
Query: 171 VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVA 230
+K +N+++ MY + +F I +D+ SW+ +I+ +S +G
Sbjct: 195 IKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEAL 254
Query: 231 GLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDF 289
+ EM S N + A + G +H L IK+ + + + SL D
Sbjct: 255 SHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDM 314
Query: 290 YAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW 349
YA+CG L+ + ++F +I + +++G NG EA+++F QM++ +
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 350 RNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF- 408
R+LL A AL G +H Y++K F +L + S+L MY ++ +F
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGF----LADLTVCNSLLTMYTFCSDLYCCFNLFE 430
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
D D ++W +++ H E L+ F LM+ +P+ +T +LL C +
Sbjct: 431 DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLK 490
Query: 469 EGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSR---IWGA 524
G +++ YS+K G E + + ++D++ +CG + +A I M D+R W
Sbjct: 491 LGSQVHCYSLKTGLAPEQFIKNG--LIDMYAKCGSLGQARRIFDSM----DNRDVVSWST 544
Query: 525 LL---AASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLS 560
L+ A SG +G + L + + +EP++ + +L+
Sbjct: 545 LIVGYAQSG-FGEEALILFKEMKSAGIEPNHVTFVGVLT 582
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 164/324 (50%), Gaps = 22/324 (6%)
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFR 304
+ T +I A + +L++G +H ++ + D +L +L Y KCG L + ++F
Sbjct: 67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 305 EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKL 364
+ ++ ++ ++++G+ QNG EAI L+ +M EDLV + +++ ACA+ + L
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 365 GRVVHGYLMKNLFNGPVEGNLHM--ETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
G+ +H ++K +E + H+ + +++ MY+R +S A VF +P+KD+I+W+S+
Sbjct: 187 GKQLHAQVIK------LESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 423 IEGFGSHGFGFEALKYFNLMMEHRM-QPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
I GF GF FEAL + M+ + PN F S L ACS G +I+ G
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIH-----GL 295
Query: 482 GIEPALDHHT----CMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLA--ASGVYGNK 535
I+ L + + D++ RCG + A + + PD+ W ++A A+ Y ++
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARR-VFDQIERPDTASWNVIIAGLANNGYADE 354
Query: 536 TLGEYTAQRLLELEPDNAGYHTLL 559
+ ++ R PD +LL
Sbjct: 355 AVSVFSQMRSSGFIPDAISLRSLL 378
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 171/339 (50%), Gaps = 8/339 (2%)
Query: 146 TLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI 205
T I ++ AC +S L G +IH + + S D + N +L MY GS + +F +
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 206 NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG 265
+R++ S+ +I+ YS G L +M E + +I A A ++ G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQ-EDLVPDQFAFGSIIKACASSSDVGLG 187
Query: 266 EGVHCLVIKTGFSDDVL-QTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQN 324
+ +H VIK S ++ Q +L+ Y + ++ + ++F I K I+ ++++GF Q
Sbjct: 188 KQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQL 247
Query: 325 GSFMEAIALFQQMQAEDLVIVPE-IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEG 383
G EA++ ++M + + E I+ + L AC++L G +HG +K+ + G
Sbjct: 248 GFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS----ELAG 303
Query: 384 NLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM 443
N S+ +MY R G ++SAR VFD++ D +W +I G ++G+ EA+ F+ M
Sbjct: 304 NAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMR 363
Query: 444 EHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGF 481
P++++ SLL A + +S+G +I+ Y +KWGF
Sbjct: 364 SSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGF 402
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 181/418 (43%), Gaps = 46/418 (11%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY 62
E P+ T +WN+ I + G A+S F +MR G D + + A + A +
Sbjct: 332 ERPD-TASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALS-Q 389
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVF-DLMLHRDVVSWTSMIAGYI 121
G H I+ G DL CN+++ Y C + C +F D + D VSW +++ +
Sbjct: 390 GMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACL 449
Query: 122 SERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
LF M V E EP+ +T+ +L+ C + L +G+Q+H Y++K+G+ +
Sbjct: 450 QHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQF 509
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
+KN ++ MYA GS + +F ++ RDV SW+ LI Y+ G L EM+S
Sbjct: 510 IKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKS-A 568
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHC-LVIKTGFSDDVLQTS-LLDFYAKCGKLDI 298
G N T V++A + G + +G ++ + + G S S ++D A+ G+L+
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLN- 627
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
EA +M+ E V+V W+ LL AC
Sbjct: 628 ------------------------------EAERFIDEMKLEPDVVV---WKTLLSACKT 654
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
G + L + ++K P H+ + +M+ GN +A + M DV
Sbjct: 655 QGNVHLAQKAAENILK---IDPFNSTAHV--LLCSMHASSGNWENAALLRSSMKKHDV 707
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 284/537 (52%), Gaps = 38/537 (7%)
Query: 95 IGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQA 153
+ AR+VFD + R+V+ MI Y++ +F M + P+ T +L+A
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 154 CCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASW 213
C S + +G +IHG A K G+ V N ++ MY G E L+ E+++RDV SW
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 214 NILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVI 273
N L+ Y+ + EM+S++ S + T+ ++ A +
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVK-ISHDAGTMASLLPA-----------------V 251
Query: 274 KTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIAL 333
+++V+ D + K GK KS ++ M+ +++N +EA+ L
Sbjct: 252 SNTTTENVMYVK--DMFFKMGK-------------KSLVSWNVMIGVYMKNAMPVEAVEL 296
Query: 334 FQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN 393
+ +M+A+ ++L AC + AL LG+ +HGY+ + + NL +E ++++
Sbjct: 297 YSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERK----KLIPNLLLENALID 352
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
MY + G + AR VF+ M +DV++WT+MI +G G G +A+ F+ + + + P+S+
Sbjct: 353 MYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIA 412
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
F++ L+ACSH+GL+ EG + M + I P L+H CMVDL GR G VKEA I M
Sbjct: 413 FVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDM 472
Query: 514 VILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVE 573
+ P+ R+WGALL A V+ + +G A +L +L P+ +GY+ LLSN+ A AGRW EV
Sbjct: 473 SMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVT 532
Query: 574 ELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
+R M K LKK PG S +EV + + FL GD +HP+++EIY L L + ++ G
Sbjct: 533 NIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELG 589
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 171/362 (47%), Gaps = 37/362 (10%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N + N+ IR++V+ G + + F M V D +TFP V +A S V G+
Sbjct: 104 NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSC-SGTIVIGRKI 162
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H A ++GL L+ N ++ Y KC + AR V D M RDVVSW S++ GY +
Sbjct: 163 HGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRF 222
Query: 127 SVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
A ++ +M V++ ++ T+ +L A +T NV
Sbjct: 223 DDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV----------------------- 259
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
MY V+ +F ++ K+ + SWN++I Y + L + M++ +G +
Sbjct: 260 --MY--------VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEA-DGFEPD 308
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFR 304
++T V+ A LS G+ +H + + + +L+ +L+D YAKCG L+ + +F
Sbjct: 309 AVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFE 368
Query: 305 EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKL 364
+ + ++ AM+S + +G +A+ALF ++Q LV + L AC++ G L+
Sbjct: 369 NMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEE 428
Query: 365 GR 366
GR
Sbjct: 429 GR 430
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 10/261 (3%)
Query: 282 LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAED 341
L L+ YA + + ++F EI ++ I + M+ ++ NG + E + +F M +
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 342 LVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNI 401
+ + +L AC+ G + +GR +HG K + L + +++MY + G +
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATK----VGLSSTLFVGNGLVSMYGKCGFL 191
Query: 402 SSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
S AR V D M +DV++W S++ G+ + +AL+ M ++ ++ T SLL A
Sbjct: 192 SEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAV 251
Query: 462 SHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPD 518
S++ +E M + G + +L M+ ++ + M EA+ + +M PD
Sbjct: 252 SNT--TTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPD 308
Query: 519 SRIWGALLAASGVYGNKTLGE 539
+ ++L A G +LG+
Sbjct: 309 AVSITSVLPACGDTSALSLGK 329
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 384 NLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM 443
N + ++ Y +++SAR VFD +P ++VI MI + ++GF E +K F M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 444 EHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMV 503
++P+ TF +L ACS SG + G KI+ S G+ L +V ++G+CG +
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT-KVGLSSTLFVGNGLVSMYGKCGFL 191
Query: 504 KEALSIILKMVILPDSRIWGALL 526
EA ++L + D W +L+
Sbjct: 192 SEA-RLVLDEMSRRDVVSWNSLV 213
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 300/538 (55%), Gaps = 11/538 (2%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCA 156
AR +FD M RDVV+WT+MI GY S + + A + F++M + PN TL +L++C
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 157 STPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE-LLFSEINKRDVASWNI 215
L G +HG VK G+ V N+++ MYA T E L+F +I ++ +W
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTT 183
Query: 216 LISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT 275
LI+ ++ +GD + + +M LE +T+ + A A +++ G+ +H VIK
Sbjct: 184 LITGFTHLGDGIGGLKMYKQML-LENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKR 242
Query: 276 GFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALF 334
GF ++ + S+LD Y +CG L + F E+ K IT ++S ++ S EA+ +F
Sbjct: 243 GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMF 301
Query: 335 QQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNM 394
Q+ +++ V + +L+ ACAN+ AL G+ +HG + + FN VE + ++++M
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVE----LANALIDM 357
Query: 395 YIRGGNISSARAVFDRM-PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
Y + GNI ++ VF + +++++WTSM+ G+GSHG+G EA++ F+ M+ ++P+ +
Sbjct: 358 YAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIV 417
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
F+++LSAC H+GLV +G K + M+ +GI P D + C+VDL GR G + EA ++ +M
Sbjct: 418 FMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERM 477
Query: 514 VILPDSRIWGALLAASGVYG-NKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEV 572
PD WGA+L A + N + A++++EL+P G + +LS + A+ G+W +
Sbjct: 478 PFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDF 537
Query: 573 EELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
+R+ M KK+ G S I V+ + F D P A +Y+ L L T++ G
Sbjct: 538 ARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAG 595
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 211/436 (48%), Gaps = 16/436 (3%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P+ + +AW I + A F +M + G + FT V ++ +M+ A
Sbjct: 69 DEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLA 128
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCW-CIGCARRVFDLMLHRDVVSWTSMIAG 119
YG + H V +++G++ LY N M++ Y C + A +F + ++ V+WT++I G
Sbjct: 129 -YGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITG 187
Query: 120 YISERHVSVACDLFNKM---RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
+ ++ +M E+ P +T+ V A S + G QIH +K G
Sbjct: 188 FTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDS--VTTGKQIHASVIKRGFQ 245
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
+ V NS+L +Y G E + F E+ +D+ +WN LIS D +
Sbjct: 246 SNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELER-SDSSEALLMFQRF 304
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGK 295
+S +G N T T +++A A L+ G+ +H + + GF+ +V L +L+D YAKCG
Sbjct: 305 ES-QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGN 363
Query: 296 LDISVQLFREI-HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
+ S ++F EI ++ ++ +MM G+ +G EA+ LF +M + + ++ +L
Sbjct: 364 IPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLS 423
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
AC + G ++ G + + +M++ + + + + ++++ R G I A + +RMP K
Sbjct: 424 ACRHAGLVEKG-LKYFNVMESEYG--INPDRDIYNCVVDLLGRAGKIGEAYELVERMPFK 480
Query: 415 -DVIAWTSMIEGFGSH 429
D W +++ +H
Sbjct: 481 PDESTWGAILGACKAH 496
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 173/347 (49%), Gaps = 9/347 (2%)
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
Y +KG EE LF E+ RDV +W +I+ Y+ R +EM +G S N T
Sbjct: 55 YFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVK-QGTSPNEFT 113
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCG-KLDISVQLFREI 306
L+ V+ + L+ G VH +V+K G + + ++++ YA C ++ + +FR+I
Sbjct: 114 LSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDI 173
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
K+ +T +++GF G + + +++QM E+ + P + A A++ ++ G+
Sbjct: 174 KVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGK 233
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF 426
+H ++K F + NL + SIL++Y R G +S A+ F M KD+I W ++I
Sbjct: 234 QIHASVIKRGF----QSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL 289
Query: 427 GSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPA 486
EAL F PN TF SL++AC++ ++ G +++ + + G
Sbjct: 290 -ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI-FRRGFNKN 347
Query: 487 LDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
++ ++D++ +CG + ++ + ++V + W +++ G +G
Sbjct: 348 VELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHG 394
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 92/180 (51%), Gaps = 2/180 (1%)
Query: 387 METSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHR 446
+ T+++ Y G + AR++FD MP +DV+AWT+MI G+ S + A + F+ M++
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 447 MQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEA 506
PN T S+L +C + +++ G + + + G+E +L M++++ C + EA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGA-LVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 507 LSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASA 566
+I + + + + W L+ G+ G +++L LE + + V+ASA
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQML-LENAEVTPYCITIAVRASA 224
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 178/583 (30%), Positives = 305/583 (52%), Gaps = 17/583 (2%)
Query: 38 GVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGC 97
G+ D+F +++ A + ++ ++ + +GL + +I I
Sbjct: 17 GIHSDSFYASLIDSATHKAQLKQIHARL-----LVLGLQFSGFLITKLIHASSSFGDITF 71
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCA 156
AR+VFD + + W ++I GY H A +++ M++ + P+S T +L+AC
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 157 STPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFS--EINKRDVASWN 214
+ L +G +H + G D V+N ++ +YA +F + +R + SW
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191
Query: 215 ILISFYSMVGDMMRVAGLINEMQSLE-GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVI 273
++S Y+ G+ M + ++M+ ++ W L V++AF +L +G +H V+
Sbjct: 192 AIVSAYAQNGEPMEALEIFSQMRKMDVKPDW--VALVSVLNAFTCLQDLKQGRSIHASVV 249
Query: 274 KTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIA 332
K G + L SL YAKCG++ + LF ++ + I AM+SG+ +NG EAI
Sbjct: 250 KMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAID 309
Query: 333 LFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSIL 392
+F +M +D+ + + ACA +G+L+ R ++ Y+ ++ + ++ + ++++
Sbjct: 310 MFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY----RDDVFISSALI 365
Query: 393 NMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSV 452
+M+ + G++ AR VFDR +DV+ W++MI G+G HG EA+ + M + PN V
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDV 425
Query: 453 TFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILK 512
TFL LL AC+HSG+V EG + M I P H+ C++DL GR G + +A +I
Sbjct: 426 TFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKC 484
Query: 513 MVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEV 572
M + P +WGALL+A + + LGEY AQ+L ++P N G++ LSN+ A+A W+ V
Sbjct: 485 MPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRV 544
Query: 573 EELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEI 615
E+R M EK L K G S +EV+G F GD +HP EEI
Sbjct: 545 AEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEI 587
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 209/424 (49%), Gaps = 11/424 (2%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN IR + F AL + M+ V D+FTFP + +A S + + G+ H
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGL-SHLQMGRFVHAQV 145
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFD--LMLHRDVVSWTSMIAGYISERHVSV 128
++G D D++ N +I Y KC +G AR VF+ + R +VSWT++++ Y
Sbjct: 146 FRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPME 205
Query: 129 ACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLR 187
A ++F++MR ++++P+ V L+ +L A L G IH VK G+ ++ + S+
Sbjct: 206 ALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNT 265
Query: 188 MYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
MYA G ++LF ++ ++ WN +IS Y+ G + +EM + + I
Sbjct: 266 MYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTI- 324
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREI 306
++T ISA A+ G+L + ++ V ++ + DDV + ++L+D +AKCG ++ + +F
Sbjct: 325 SITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRT 384
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
+ + AM+ G+ +G EAI+L++ M+ + + LL AC + G ++ G
Sbjct: 385 LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG- 443
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD-VIAWTSMIEG 425
+ + + + ++++ R G++ A V MPV+ V W +++
Sbjct: 444 ---WWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
Query: 426 FGSH 429
H
Sbjct: 501 CKKH 504
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 176/409 (43%), Gaps = 49/409 (11%)
Query: 5 PNNTM-AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
P T+ +W + + G+ AL F +MR+M V D V A + ++ D G
Sbjct: 183 PERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQ-DLKQG 241
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
+ H ++MGL+++ ++ Y KC + A+ +FD M +++ W +MI+GY
Sbjct: 242 RSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 124 RHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
+ A D+F++M ++ P+++++ + AC L ++ Y +S D +
Sbjct: 302 GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS 361
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
++++ M+A GS E L+F RDV W+ +I Y + G L M+ H
Sbjct: 362 SALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVH 421
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQL 302
++ L L+++ C H +++ G+ F+ + I+ Q
Sbjct: 422 PNDVTFLGLLMA----CN--------HSGMVREGWW----------FFNRMADHKINPQ- 458
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
+ H+ I L + G +A + + M + V V W LL AC +
Sbjct: 459 --QQHYACVIDL------LGRAGHLDQAYEVIKCMPVQPGVTV---WGALLSACKKHRHV 507
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
+LG Y + LF+ ++ S Y++ N+ +A ++DR+
Sbjct: 508 ELGE----YAAQQLFS--------IDPSNTGHYVQLSNLYAAARLWDRV 544
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 192/574 (33%), Positives = 300/574 (52%), Gaps = 14/574 (2%)
Query: 54 SSMRADAVYGKMTHCVAIQ-MGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVS 112
SSMR G++ H ++ + + N +I+ Y K AR V L R+VVS
Sbjct: 20 SSMR----LGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVS 75
Query: 113 WTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAV 171
WTS+I+G H S A F +MR E + PN T +A + G QIH AV
Sbjct: 76 WTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 172 KSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAG 231
K G ++D V S MY ++ LF EI +R++ +WN IS G
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFY 290
E + ++GH +I T ++A + +L+ G +H LV+++GF DV + L+DFY
Sbjct: 196 AFIEFRRIDGHPNSI-TFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Query: 291 AKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR 350
KC ++ S +F E+ K+ ++ ++++ ++QN +A L+ + + + + +
Sbjct: 255 GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMIS 314
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
++L ACA + L+LGR +H + +K VE + + +++++MY + G I + FD
Sbjct: 315 SVLSACAGMAGLELGRSIHAHAVKAC----VERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRM--QPNSVTFLSLLSACSHSGLVS 468
MP K+++ S+I G+ G AL F M PN +TF+SLLSACS +G V
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
G KI+ SM+ +GIEP +H++C+VD+ GR GMV+ A I KM I P +WGAL A
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNA 490
Query: 529 SGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKP 588
++G LG A+ L +L+P ++G H LLSN A+AGRW E +R E+ +KK
Sbjct: 491 CRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGA 550
Query: 589 GWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTL 622
G+S I VK + F + D +H +EI L L
Sbjct: 551 GYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKL 584
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 211/431 (48%), Gaps = 14/431 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++W I G F +AL F +MR+ GV + FTFP +A++S+R V GK
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL-PVTGKQI 130
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H +A++ G LD++ + D Y K AR++FD + R++ +W + I+ +++
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
A + F + R++ PNS+T L AC LN+G Q+HG ++SG D SV N +
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFY--SMVGDMMRVAGLINEMQSLEGHS 243
+ Y E++F+E+ ++ SW L++ Y + + V L + +E
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQL 302
+ I + V+SA A L G +H +K + + ++L+D Y KCG ++ S Q
Sbjct: 311 FMISS---VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 367
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLG 360
F E+ K+ +T +++ G+ G A+ALF++M P + +LL AC+ G
Sbjct: 368 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 427
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA-W 419
A++ G + M++ + +E + I++M R G + A +MP++ I+ W
Sbjct: 428 AVENGMKIFDS-MRSTYG--IEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 420 TSMIEGFGSHG 430
++ HG
Sbjct: 485 GALQNACRMHG 495
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 155/343 (45%), Gaps = 15/343 (4%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY---G 63
N WN I V G+ A+ F + R++ ++ TF A S D ++ G
Sbjct: 173 NLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS----DWLHLNLG 228
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
H + ++ G D D+ CN +IDFY KC I + +F M ++ VSW S++A Y+
Sbjct: 229 MQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQN 288
Query: 124 RHVSVACDLFNKMRVEL-EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
A L+ + R ++ E + + +L AC L +G IH +AVK+ V V
Sbjct: 289 HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVG 348
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE-G 241
++++ MY G E+ E F E+ ++++ + N LI Y+ G + L EM G
Sbjct: 349 SALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCG 408
Query: 242 HSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT-GFSDDVLQTS-LLDFYAKCGKLDIS 299
+ N T ++SA ++ G + G + + T G S ++D + G ++ +
Sbjct: 409 PTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDL 342
+ +++ + I++ G +QN M + AE+L
Sbjct: 469 YEFIKKMPIQPTISVW----GALQNACRMHGKPQLGLLAAENL 507
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
LL + +++LGRVVH ++K L + P + ++NMY + + SAR V
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPP---FLANYLINMYSKLDHPESARLVLRLT 68
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
P ++V++WTS+I G +G AL F M + PN TF A + L G
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 472 KIY 474
+I+
Sbjct: 129 QIH 131
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 299 bits (766), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 185/626 (29%), Positives = 315/626 (50%), Gaps = 8/626 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ + +N I G A+ FK+M G+ D+ T + A S+ G+
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA-DGTLFRGQQL 411
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H ++G + +++ Y KC I A F +VV W M+ Y +
Sbjct: 412 HAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDL 471
Query: 127 SVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
+ +F +M++E + PN T +L+ C L +G QIH +K+ ++ V + +
Sbjct: 472 RNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVL 531
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ MYA G + + +DV SW +I+ Y+ + +M G +
Sbjct: 532 IDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLD-RGIRSD 590
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFR 304
LT +SA A L +G+ +H +GFS D+ Q +L+ Y++CGK++ S F
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFE 650
Query: 305 EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKL 364
+ I A++SGF Q+G+ EA+ +F +M E + + + + A + +K
Sbjct: 651 QTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQ 710
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
G+ VH + K ++ E + ++++MY + G+IS A F + K+ ++W ++I
Sbjct: 711 GKQVHAVITKTGYDSETE----VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 766
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
+ HGFG EAL F+ M+ ++PN VT + +LSACSH GLV +G + SM +G+
Sbjct: 767 AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 826
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
P +H+ C+VD+ R G++ A I +M I PD+ +W LL+A V+ N +GE+ A
Sbjct: 827 PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHH 886
Query: 545 LLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLS 604
LLELEP+++ + LLSN+ A + +W+ + R++M EK +KK+PG S IEVK + F
Sbjct: 887 LLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 946
Query: 605 GDITHPEAEEIYAALCTLSRVTQDFG 630
GD HP A+EI+ L++ + G
Sbjct: 947 GDQNHPLADEIHEYFQDLTKRASEIG 972
Score = 205 bits (521), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 156/575 (27%), Positives = 268/575 (46%), Gaps = 15/575 (2%)
Query: 1 MEEEPNNTM-AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRAL--SSMR 57
+E P T+ WN I+ F +M V + TF V A S+
Sbjct: 143 FDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVA 202
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
D V + H + GL CN +ID Y + + ARRVFD + +D SW +MI
Sbjct: 203 FDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMI 260
Query: 118 AGYISERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
+G + A LF M V + P +L AC L +G Q+HG +K G
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
D V N+++ +Y G+ E +FS +++RD ++N LI+ S G + L M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGK 295
L+G + TL ++ A + G L +G+ +H K GF S++ ++ +LL+ YAKC
Sbjct: 381 H-LDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 296 LDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDA 355
++ ++ F E ++ + M+ + + +F+QMQ E++V + ++L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 356 CANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD 415
C LG L+LG +H ++K F + N ++ + +++MY + G + +A + R KD
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD 555
Query: 416 VIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYY 475
V++WT+MI G+ + F +AL F M++ ++ + V + +SAC+ + EG +I +
Sbjct: 556 VVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-H 614
Query: 476 SMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNK 535
+ G L +V L+ RCG ++E+ + + D+ W AL++ GN
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNN 673
Query: 536 TLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWN 570
R+ DN + T S VKA++ N
Sbjct: 674 EEALRVFVRMNREGIDNNNF-TFGSAVKAASETAN 707
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/510 (26%), Positives = 240/510 (47%), Gaps = 12/510 (2%)
Query: 27 ALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMI 86
A+ F M +G+ + F V A + + + G+ H + +++G D Y CN ++
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI-GEQLHGLVLKLGFSSDTYVCNALV 330
Query: 87 DFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSV 145
Y + A +F M RD V++ ++I G + A +LF +M ++ LEP+S
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 146 TLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI 205
TL ++ AC A L G Q+H Y K G + ++ ++L +YA E F E
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 206 NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG 265
+V WN+++ Y ++ D+ + +MQ +E N T ++ + G+L G
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ-IEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 266 EGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQN 324
E +H +IKT F + S L+D YAK GKLD + + K ++ M++G+ Q
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQY 569
Query: 325 GSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGN 384
+A+ F+QM + N + ACA L ALK G+ +H + F+ +
Sbjct: 570 NFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS----SD 625
Query: 385 LHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMME 444
L + +++ +Y R G I + F++ D IAW +++ GF G EAL+ F M
Sbjct: 626 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 445 HRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM-KWGFGIEPALDHHTCMVDLFGRCGMV 503
+ N+ TF S + A S + + +G +++ + K G+ E + ++ ++ +CG +
Sbjct: 686 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEV--CNALISMYAKCGSI 743
Query: 504 KEALSIILKMVILPDSRIWGALLAASGVYG 533
+A L+ V + W A++ A +G
Sbjct: 744 SDAEKQFLE-VSTKNEVSWNAIINAYSKHG 772
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 196/426 (46%), Gaps = 8/426 (1%)
Query: 1 MEEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E E N + WN+ + + L ++ F++M+ + + +T+P + + + D
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRL-GDL 506
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
G+ H I+ L+ Y C+ +ID Y K + A + +DVVSWT+MIAGY
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 121 ISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
A F +M + + V L + AC L G QIH A SG D
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDL 626
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
+N+++ +Y+ G EE L F + D +WN L+S + G+ + M
Sbjct: 627 PFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR- 685
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDI 298
EG N T + A ++ N+ +G+ VH ++ KTG+ S+ + +L+ YAKCG +
Sbjct: 686 EGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISD 745
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
+ + F E+ K+ ++ A+++ + ++G EA+ F QM ++ +L AC++
Sbjct: 746 AEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSH 805
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVI 417
+G + G + P + +++M R G +S A+ MP+K D +
Sbjct: 806 IGLVDKGIAYFESMNSEYGLSPKPEHY---VCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 862
Query: 418 AWTSMI 423
W +++
Sbjct: 863 VWRTLL 868
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/474 (24%), Positives = 234/474 (49%), Gaps = 29/474 (6%)
Query: 99 RRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE------LEPNSVTLIVMLQ 152
R VF + S+ + I+ YISE + F + R++ + PN TL +L+
Sbjct: 40 RTVFPTLCGTRRASFAA-ISVYISED------ESFQEKRIDSVENRGIRPNHQTLKWLLE 92
Query: 153 ACCAST-PLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVA 211
C + L+ G ++H +K G+ + + + Y KG +F E+ +R +
Sbjct: 93 GCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIF 152
Query: 212 SWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG--EGVH 269
+WN +I + + V GL M S E + N T + V+ A + G+++ E +H
Sbjct: 153 TWNKMIKELASRNLIGEVFGLFVRMVS-ENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIH 210
Query: 270 CLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
++ G D V+ L+D Y++ G +D++ ++F + K + + AM+SG +N
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 329 EAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
EAI LF M ++ P + ++L AC + +L++G +HG ++K F+ + ++
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS----DTYVC 326
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ 448
+++++Y GN+ SA +F M +D + + ++I G G+G +A++ F M ++
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEAL 507
P+S T SL+ ACS G + G +++ Y+ K GF ++ +++L+ +C ++ AL
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIE--GALLNLYAKCADIETAL 444
Query: 508 SIILKMVILPDSRIWGALLAASGVYGN--KTLGEYTAQRLLELEPDNAGYHTLL 559
L+ + + +W +L A G+ + + + ++ E+ P+ Y ++L
Sbjct: 445 DYFLETEV-ENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 229/513 (44%), Gaps = 21/513 (4%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G+ H +++GLD + + DFY+ + A +VFD M R + +W MI S
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 123 ERHVSVACDLFNKMRVE-LEPNSVTLIVMLQAC-CASTPLNVGTQIHGYAVKSGVLMDWS 180
+ LF +M E + PN T +L+AC S +V QIH + G+
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTV 223
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V N ++ +Y+ G + +F + +D +SW +IS S L +M L
Sbjct: 224 VCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVL- 282
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDIS 299
G + V+SA K +L GE +H LV+K GFS D + +L+ Y G L +
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+F + + +T +++G Q G +A+ LF++M + L +L+ AC+
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSAD 402
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
G L G+ +H Y K F N +E ++LN+Y + +I +A F V++V+ W
Sbjct: 403 GTLFRGQQLHAYTTKLGF----ASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLW 458
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS-MK 478
M+ +G + + F M + PN T+ S+L C G + G +I+ +K
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 479 WGFGIEPALDHHTC--MVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
F L+ + C ++D++ + G + A I+++ D W ++A Y
Sbjct: 519 TNF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFA-GKDVVSWTTMIAGYTQYNFDD 573
Query: 537 LGEYTAQRLLE--LEPDNAGYHTLLSNVKASAG 567
T +++L+ + D G L + V A AG
Sbjct: 574 KALTTFRQMLDRGIRSDEVG---LTNAVSACAG 603
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 193/623 (30%), Positives = 318/623 (51%), Gaps = 57/623 (9%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
NT++WN I + G A + F +M+ G+ + +T V R +S+ + G+
Sbjct: 89 NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSL-VLLLRGEQI 147
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLML-HRDVVSWTSMIAGYISERH 125
H I+ G DLD+ N ++ Y +C I A +F+ M ++ V+WTSM+ GY
Sbjct: 148 HGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGF 207
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A + F +R E + N T +L AC + + VG Q+H VKSG + V+++
Sbjct: 208 AFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSA 267
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG--H 242
++ MYA E L + DV SWN SM+ +R GLI E S+ G H
Sbjct: 268 LIDMYAKCREMESARALLEGMEVDDVVSWN------SMIVGCVR-QGLIGEALSMFGRMH 320
Query: 243 SWNIETLTLVISAFAKCGNLSKGE-----GVHCLVIKTGFSD-DVLQTSLLDFYAKCGKL 296
+++ I + C LS+ E HCL++KTG++ ++ +L+D YAK G +
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIM 380
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC 356
D ++++F + K I+ A+++G NGS+ EA+ LF M+ + + ++L A
Sbjct: 381 DSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSAS 440
Query: 357 ANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
A L L+ G+ VHG +K+ F +L + S++ MY + G++ A +F+ M ++D+
Sbjct: 441 AELTLLEFGQQVHGNYIKSGF----PSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDL 496
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
I WT +I G+ +G +A +YF+ S
Sbjct: 497 ITWTCLIVGYAKNGLLEDAQRYFD-----------------------------------S 521
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
M+ +GI P +H+ CM+DLFGR G + ++ +M + PD+ +W A+LAAS +GN
Sbjct: 522 MRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIE 581
Query: 537 LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVK 596
GE A+ L+ELEP+NA + LSN+ ++AGR +E +RR M +++ K+PG S +E K
Sbjct: 582 NGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEK 641
Query: 597 GVSYGFLSGDITHPEAEEIYAAL 619
G + F+S D HP EIY+ +
Sbjct: 642 GKVHSFMSEDRRHPRMVEIYSKV 664
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 212/483 (43%), Gaps = 48/483 (9%)
Query: 1 MEEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
ME E NN + W + + G A+ F+ +R+ G + +TFP V A +S+ A
Sbjct: 186 MEGEKNN-VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACR 244
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
V G HC ++ G ++Y + +ID Y KC + AR + + M DVVSW SMI G
Sbjct: 245 V-GVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGC 303
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCAS-TPLNVGTQIHGYAVKSGVLMD 178
+ + + A +F +M +++ + T+ +L S T + + + H VK+G
Sbjct: 304 VRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATY 363
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQS 238
V N+++ MYA +G + +F + ++DV SW L++ + G L M+
Sbjct: 364 KLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMR- 422
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLD 297
+ G + + V+SA A+ L G+ VH IK+GF + + SL+ Y KCG L+
Sbjct: 423 VGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLE 482
Query: 298 ISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA 357
+ +F + + IT ++ G+ +NG +A F M
Sbjct: 483 DANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM-------------------- 522
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DV 416
R V+G + GP +++++ R G+ + +M V+ D
Sbjct: 523 --------RTVYG-----ITPGP-----EHYACMIDLFGRSGDFVKVEQLLHQMEVEPDA 564
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQP-NSVTFLSLLSACSHSGLVSEGCKIYY 475
W +++ HG + +ME ++P N+V ++ L + S +G E +
Sbjct: 565 TVWKAILAASRKHGNIENGERAAKTLME--LEPNNAVPYVQLSNMYSAAGRQDEAANVRR 622
Query: 476 SMK 478
MK
Sbjct: 623 LMK 625
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 131/250 (52%), Gaps = 9/250 (3%)
Query: 279 DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ 338
D+ +++ Y+ +L + +LFR K+ I+ A++SG+ ++GS +EA LF +MQ
Sbjct: 58 DEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQ 117
Query: 339 AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRG 398
++ + ++L C +L L G +HG+ +K F+ V ++ +L MY +
Sbjct: 118 SDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDV----NVVNGLLAMYAQC 173
Query: 399 GNISSARAVFDRMP-VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSL 457
IS A +F+ M K+ + WTSM+ G+ +GF F+A++ F + Q N TF S+
Sbjct: 174 KRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSV 233
Query: 458 LSACSHSGLVSEGCKIYYSM-KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVIL 516
L+AC+ G +++ + K GF + + ++D++ +C ++ A +++ M +
Sbjct: 234 LTACASVSACRVGVQVHCCIVKSGFKTNIYV--QSALIDMYAKCREMESARALLEGMEV- 290
Query: 517 PDSRIWGALL 526
D W +++
Sbjct: 291 DDVVSWNSMI 300
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
Query: 359 LGAL-KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVI 417
LG L K GRV + +F+ E + +++ Y +S A +F PVK+ I
Sbjct: 35 LGDLSKSGRVDEA---RQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTI 91
Query: 418 AWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YS 476
+W ++I G+ G EA F M ++PN T S+L C+ L+ G +I+ ++
Sbjct: 92 SWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHT 151
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
+K GF ++ ++ ++ ++ +C + EA + M ++ W ++L
Sbjct: 152 IKTGFDLD--VNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTG 201
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 196/644 (30%), Positives = 332/644 (51%), Gaps = 44/644 (6%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNR---ALSSMRADAVY 62
N+++W+ I V AL FK+M+++ + V R ALS +R
Sbjct: 244 KNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR----L 299
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G H A++ D +D Y KC + A+ +FD + + S+ +MI GY
Sbjct: 300 GGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQ 359
Query: 123 ERHVSVACDLFNK-MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
E H A LF++ M L + ++L + +AC L+ G QI+G A+KS + +D V
Sbjct: 360 EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCV 419
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM--QSL 239
N+ + MY + E +F E+ +RD SWN +I+ + G L M +
Sbjct: 420 ANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRI 479
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLD- 297
E + ++ + G+L G +H ++K+G S+ + SL+D Y+KCG ++
Sbjct: 480 EPDEFTFGSILKACTG----GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEE 535
Query: 298 ---ISVQLFR------------EIHFKSY----ITLGAMMSGFIQNGSFMEAIALFQQMQ 338
I + F+ ++H K ++ +++SG++ +A LF +M
Sbjct: 536 AEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM 595
Query: 339 AEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYI 396
++ I P+ + +LD CANL + LG+ +H ++K ++ ++++ +++++MY
Sbjct: 596 --EMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK----ELQSDVYICSTLVDMYS 649
Query: 397 RGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLS 456
+ G++ +R +F++ +D + W +MI G+ HG G EA++ F M+ ++PN VTF+S
Sbjct: 650 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 709
Query: 457 LLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVIL 516
+L AC+H GL+ +G + +Y MK +G++P L H++ MVD+ G+ G VK AL +I +M
Sbjct: 710 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE 769
Query: 517 PDSRIWGALLAASGVYGNKT-LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEEL 575
D IW LL ++ N + E LL L+P ++ +TLLSNV A AG W +V +L
Sbjct: 770 ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 829
Query: 576 RREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
RR M LKK+PG S +E+K + FL GD HP EEIY L
Sbjct: 830 RRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEEL 873
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 138/584 (23%), Positives = 271/584 (46%), Gaps = 36/584 (6%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ ++WN + ++ G+ ++ F M + G+ D TF ++ + S + D G
Sbjct: 144 DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLE-DTSLGMQI 202
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + +++G D D+ + ++D Y K + RVF + ++ VSW+++IAG + +
Sbjct: 203 HGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLL 262
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
S+A F +M +V + +L++C A + L +G Q+H +A+KS D V+ +
Sbjct: 263 SLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTAT 322
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
L MYA + ++ ++LF + S+N +I+ YS + L + + S G ++
Sbjct: 323 LDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMS-SGLGFD 381
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFR 304
+L+ V A A LS+G ++ L IK+ S DV + + +D Y KC L + ++F
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 305 EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKL 364
E+ + ++ A+++ QNG E + LF M + + ++L AC G+L
Sbjct: 442 EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGY 500
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV----FDRMPVKDV---- 416
G +H ++K+ + N + S+++MY + G I A + F R V
Sbjct: 501 GMEIHSSIVKS----GMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 556
Query: 417 ------------IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHS 464
++W S+I G+ +A F MME + P+ T+ ++L C++
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANL 616
Query: 465 GLVSEGCKIYYSMKWGFGIEPALDHHTC--MVDLFGRCGMVKEALSIILKMVILPDSRIW 522
G +I+ + E D + C +VD++ +CG + ++ ++ + + D W
Sbjct: 617 ASAGLGKQIHAQV---IKKELQSDVYICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTW 672
Query: 523 GALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASA 566
A++ +G +R++ LE + T +S ++A A
Sbjct: 673 NAMICGYAHHGKGEEAIQLFERMI-LENIKPNHVTFISILRACA 715
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/498 (25%), Positives = 231/498 (46%), Gaps = 57/498 (11%)
Query: 104 LMLHRDVVSWTSMIAGYISERHV---SVACDLFNKMRVELEPNSVTLIVMLQACCASTPL 160
L + R VVS+ + IS R V S D N++ ++ + + C L
Sbjct: 8 LHMTRSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVN---SVSTTNFSFVFKECAKQGAL 64
Query: 161 NVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFY 220
+G Q H + + SG V N +L++Y + ++F ++ RDV SWN +I+ Y
Sbjct: 65 ELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGY 124
Query: 221 SMVGDMMRVAGLINEMQSLEGHSWN--------------------------IE----TLT 250
S DM + N M + SWN IE T
Sbjct: 125 SKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFA 184
Query: 251 LVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFK 309
+++ + + S G +H +V++ G DV+ S LLD YAK + S+++F+ I K
Sbjct: 185 IILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEK 244
Query: 310 SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVH 369
+ ++ A+++G +QN A+ F++MQ + + I+ ++L +CA L L+LG +H
Sbjct: 245 NSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLH 304
Query: 370 GYLMKNLF--NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFG 427
+ +K+ F +G V T+ L+MY + N+ A+ +FD + ++ +MI G+
Sbjct: 305 AHALKSDFAADGIV------RTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 428 SHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPAL 487
GF+AL F+ +M + + ++ + AC+ +SEG +IY G I+ +L
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY-----GLAIKSSL 413
Query: 488 DHHTCM----VDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN--KTLGEYT 541
C+ +D++G+C + EA + +M D+ W A++AA G +TL +
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMR-RRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 542 AQRLLELEPDNAGYHTLL 559
+ +EPD + ++L
Sbjct: 473 SMLRSRIEPDEFTFGSIL 490
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 213/431 (49%), Gaps = 13/431 (3%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVELE 141
N MI+ Y K + A F++M RDVVSW SM++GY+ + ++F M R +E
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 177
Query: 142 PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELL 201
+ T ++L+ C ++G QIHG V+ G D +++L MYA E +
Sbjct: 178 FDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRV 237
Query: 202 FSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE-GHSWNIETLTLVISAFAKCG 260
F I +++ SW+ +I+ + EMQ + G S +I V+ + A
Sbjct: 238 FQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSI--YASVLRSCAALS 295
Query: 261 NLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMS 319
L G +H +K+ F +D +++T+ LD YAKC + + LF + + AM++
Sbjct: 296 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMIT 355
Query: 320 GFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNG 379
G+ Q +A+ LF ++ + L + ACA + L G ++G +K+
Sbjct: 356 GYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKS---- 411
Query: 380 PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYF 439
+ ++ + + ++MY + ++ A VFD M +D ++W ++I +G G+E L F
Sbjct: 412 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLF 471
Query: 440 NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM-KWGFGIEPALDHHTCMVDLFG 498
M+ R++P+ TF S+L AC+ G + G +I+ S+ K G ++ ++D++
Sbjct: 472 VSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVG--CSLIDMYS 528
Query: 499 RCGMVKEALSI 509
+CGM++EA I
Sbjct: 529 KCGMIEEAEKI 539
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 139/332 (41%), Gaps = 26/332 (7%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E + ++WN I H G+ + L F M + + D FTF + +A +
Sbjct: 442 EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG--GSLG 499
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRD------------ 109
YG H ++ G+ + ++ID Y KC I A ++ R
Sbjct: 500 YGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKM 559
Query: 110 --------VVSWTSMIAGYISERHVSVACDLFNK-MRVELEPNSVTLIVMLQACCASTPL 160
VSW S+I+GY+ + A LF + M + + P+ T +L C
Sbjct: 560 HNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASA 619
Query: 161 NVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFY 220
+G QIH +K + D + ++++ MY+ G + L+F + +RD +WN +I Y
Sbjct: 620 GLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGY 679
Query: 221 SMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG-EGVHCLVIKTGFSD 279
+ G L M LE N T ++ A A G + KG E + + G
Sbjct: 680 AHHGKGEEAIQLFERM-ILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDP 738
Query: 280 DVLQTS-LLDFYAKCGKLDISVQLFREIHFKS 310
+ S ++D K GK+ +++L RE+ F++
Sbjct: 739 QLPHYSNMVDILGKSGKVKRALELIREMPFEA 770
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/509 (33%), Positives = 272/509 (53%), Gaps = 37/509 (7%)
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
+ + + +L+A + L G ++HG A K L D V+ + MYA G +F
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 203 SEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNL 262
E++ RDV +WN +I Y G + L EM+ + L ++SA + GN+
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEM-ILCNIVSACGRTGNM 228
Query: 263 SKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGF 321
++ +I+ D L T+L+ YA G +D++ + FR++ ++ AM+SG+
Sbjct: 229 RYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGY 288
Query: 322 IQNGSFMEAIALFQQMQAEDLV-----------------------------IVPEIWR-- 350
+ G +A +F Q + +DLV I P++
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMF 348
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
+++ ACANLG L + VH + N +E L + +++NMY + G + + R VF++
Sbjct: 349 SVISACANLGILDKAKWVHSCIHVN----GLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
MP ++V++W+SMI HG +AL F M + ++PN VTF+ +L CSHSGLV EG
Sbjct: 405 MPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEG 464
Query: 471 CKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASG 530
KI+ SM + I P L+H+ CMVDLFGR +++EAL +I M + + IWG+L++A
Sbjct: 465 KKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACR 524
Query: 531 VYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGW 590
++G LG++ A+R+LELEPD+ G L+SN+ A RW +V +RR M EK++ K+ G
Sbjct: 525 IHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGL 584
Query: 591 SCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
S I+ G S+ FL GD H ++ EIYA L
Sbjct: 585 SRIDQNGKSHEFLIGDKRHKQSNEIYAKL 613
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/460 (23%), Positives = 214/460 (46%), Gaps = 39/460 (8%)
Query: 5 PNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGK 64
P ++ +N +R + + + ++++R +G D F+F + +A+S + A G
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSA-LFEGM 131
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H VA ++ D + +D Y C I AR VFD M HRDVV+W +MI Y
Sbjct: 132 ELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFG 191
Query: 125 HVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
V A LF +M+ + P+ + L ++ AC + + I+ + +++ V MD +
Sbjct: 192 LVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 184 SVLRMYADK-------------------------------GSTEEVELLFSEINKRDVAS 212
+++ MYA G ++ +++F + K+D+
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 213 WNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLV 272
W +IS Y + D + A + E G ++ ++ VISA A G L K + VH +
Sbjct: 312 WTTMISAY-VESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCI 370
Query: 273 IKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAI 331
G ++ + +L++ YAKCG LD + +F ++ ++ ++ +M++ +G +A+
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430
Query: 332 ALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSI 391
+LF +M+ E++ + +L C++ G ++ G+ + M + +N + L +
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS-MTDEYN--ITPKLEHYGCM 487
Query: 392 LNMYIRGGNISSARAVFDRMPV-KDVIAWTSMIEGFGSHG 430
++++ R + A V + MPV +V+ W S++ HG
Sbjct: 488 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/655 (29%), Positives = 334/655 (50%), Gaps = 54/655 (8%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV--YGK 64
+ ++WN I + A +F M + + T V +SM + G+
Sbjct: 188 DVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGR 247
Query: 65 MTHCVAIQMG-LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
H +Q L ++ CN+++ FY++ I A +F M +D+VSW +IAGY S
Sbjct: 248 QIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASN 307
Query: 124 RHVSVACDLFNKM--RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVK-SGVLMDWS 180
A LF+ + + ++ P+SVT+I +L C T L G +IH Y ++ S +L D S
Sbjct: 308 CEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTS 367
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V N+++ YA G T FS ++ +D+ SWN ++ ++ D + +N + L
Sbjct: 368 VGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFA---DSPKQFQFLNLLHHLL 424
Query: 241 GHSWNIETLTLVISAFAKCGN---LSKGEGVHCLVIKTGFSDD----VLQTSLLDFYAKC 293
+ ++++T ++S C N + K + VH +K G D L +LLD YAKC
Sbjct: 425 NEAITLDSVT-ILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKC 483
Query: 294 GKLDISVQLFREI-HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR-- 350
G ++ + ++F + ++ ++ +++SG++ +GS +A LF +M DL + R
Sbjct: 484 GNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIY 543
Query: 351 -----------------------------NLLDACANLGALKLGRVVHGYLMKNLFNGPV 381
NLL CA L +L L R HGY+++
Sbjct: 544 AESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL---- 599
Query: 382 EGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNL 441
G++ ++ ++L++Y + G++ A +VF +D++ +T+M+ G+ HG G EAL ++
Sbjct: 600 -GDIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSH 658
Query: 442 MMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCG 501
M E ++P+ V ++L+AC H+GL+ +G +IY S++ G++P ++ + C VDL R G
Sbjct: 659 MTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGG 718
Query: 502 MVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSN 561
+ +A S + +M + P++ IWG LL A Y LG A LL+ E D+ G H L+SN
Sbjct: 719 RLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISN 778
Query: 562 VKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIY 616
+ A+ +W V ELR M +K++KK G S +EV G F+SGD +HP + I+
Sbjct: 779 MYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIF 833
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 129/517 (24%), Positives = 237/517 (45%), Gaps = 45/517 (8%)
Query: 21 LGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLY 80
+G + F+ + G H F V +A +S+ +D G+ H ++G
Sbjct: 1 MGPLRQFVQNFRLLSGFGTDHRVFLDVV--KACASV-SDLTSGRALHGCVFKLGHIACSE 57
Query: 81 FCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC-----DLFNK 135
++++ Y KC + +++F M D V W ++ G +SV+C F
Sbjct: 58 VSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTG------LSVSCGRETMRFFKA 111
Query: 136 MRV--ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKG 193
M E +P+SVT ++L C G +H Y +K+G+ D V N+++ MYA G
Sbjct: 112 MHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFG 171
Query: 194 ST-EEVELLFSEINKRDVASWNILISFYS---MVGDMMRVAGLINEMQSLEGHSWNIETL 249
+ F I +DV SWN +I+ +S M+ D R L+ + + E + I +
Sbjct: 172 FIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLK-EPTEPNYATIANV 230
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQT------SLLDFYAKCGKLDISVQLF 303
V ++ K G +H V++ + LQT SL+ FY + G+++ + LF
Sbjct: 231 LPVCASMDKNIACRSGRQIHSYVVQRSW----LQTHVFVCNSLVSFYLRVGRIEEAASLF 286
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM-QAEDLVIVPEIWRNLLDACANLGAL 362
+ K ++ +++G+ N + +A LF + D+ ++L CA L L
Sbjct: 287 TRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDL 346
Query: 363 KLGRVVHGYLMKN--LFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWT 420
G+ +H Y++++ L GN ++++ Y R G+ S+A F M KD+I+W
Sbjct: 347 ASGKEIHSYILRHSYLLEDTSVGN-----ALISFYARFGDTSAAYWAFSLMSTKDIISWN 401
Query: 421 SMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKW 479
++++ F F+ L + ++ + +SVT LSLL C + + + +++ YS+K
Sbjct: 402 AILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKA 461
Query: 480 GF---GIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
G EP L + ++D + +CG V+ A I L +
Sbjct: 462 GLLHDEEEPKLGN--ALLDAYAKCGNVEYAHKIFLGL 496
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 11/171 (6%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFT----FPVVNRALSSMR 57
E + W+L +R + + + A+ F++++ G+ +T T PV + L+S+
Sbjct: 527 EMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQ-LASLH 585
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
+ H I+ GL D+ T++D Y KC + A VF RD+V +T+M+
Sbjct: 586 ----LVRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMV 640
Query: 118 AGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIH 167
AGY A +++ M ++P+ V + ML ACC + + G QI+
Sbjct: 641 AGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIY 691
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 191/583 (32%), Positives = 316/583 (54%), Gaps = 27/583 (4%)
Query: 63 GKMTHCVAIQMGL-DLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
G+ H I GL D + N +++ Y KC I ARRVF M +D VSW SMI G
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLD 391
Query: 122 SERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
A + + MR ++ P S TLI L +C + +G QIHG ++K G+ ++ S
Sbjct: 392 QNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS 451
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMR--------VAGL 232
V N+++ +YA+ G E +FS + + D SWN S++G + R V
Sbjct: 452 VSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN------SIIGALARSERSLPEAVVCF 505
Query: 233 INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYA 291
+N ++ G N T + V+SA + G+ +H L +K +D+ + +L+ Y
Sbjct: 506 LNAQRA--GQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYG 563
Query: 292 KCGKLDISVQLF-REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR 350
KCG++D ++F R + +T +M+SG+I N +A+ L M + ++
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYA 623
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
+L A A++ L+ G VH ++ +E ++ + +++++MY + G + A F+
Sbjct: 624 TVLSAFASVATLERGMEVHACSVR----ACLESDVVVGSALVDMYSKCGRLDYALRFFNT 679
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM-MEHRMQPNSVTFLSLLSACSHSGLVSE 469
MPV++ +W SMI G+ HG G EALK F M ++ + P+ VTF+ +LSACSH+GL+ E
Sbjct: 680 MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Query: 470 GCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAAS 529
G K + SM +G+ P ++H +CM D+ GR G + + I KM + P+ IW +L A
Sbjct: 740 GFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799
Query: 530 -GVYGNKT-LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKK 587
G K LG+ A+ L +LEP+NA + LL N+ A+ GRW ++ + R++M + D+KK+
Sbjct: 800 CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKE 859
Query: 588 PGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
G+S + +K + F++GD +HP+A+ IY L L+R +D G
Sbjct: 860 AGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAG 902
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 222/468 (47%), Gaps = 23/468 (4%)
Query: 75 LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE-RHVSVACDLF 133
LD D+Y CN +I+ Y++ AR+VFD M R+ VSW +++GY H L
Sbjct: 32 LDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLR 91
Query: 134 NKMRVELEPNSVTLIVMLQAC--CASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYAD 191
+ ++ + N + +L+AC S + G QIHG K +D V N ++ MY
Sbjct: 92 DMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWK 151
Query: 192 -KGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLT 250
GS F +I ++ SWN +IS YS GD + + MQ +
Sbjct: 152 CIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGS 211
Query: 251 LVISAFAKC-GNLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHF 308
LV +A + ++ E + C + K+G D+ S L+ +AK G L + ++F ++
Sbjct: 212 LVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMET 271
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD-----ACANLGALK 363
++ +TL +M G ++ EA LF M + + + PE + LL + A LK
Sbjct: 272 RNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFPEYSLAEEVGLK 330
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
GR VHG+++ G V+ + + ++NMY + G+I+ AR VF M KD ++W SMI
Sbjct: 331 KGREVHGHVIT---TGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMI 387
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFG 482
G +G EA++ + M H + P S T +S LS+C+ G +I+ S+K G
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK--LG 445
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILP--DSRIWGALLAA 528
I+ + ++ L+ G + E I M P D W +++ A
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSM---PEHDQVSWNSIIGA 490
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 149/588 (25%), Positives = 270/588 (45%), Gaps = 49/588 (8%)
Query: 2 EEEP-NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P N ++W + + G+ AL + M + G+ + + F V RA + +
Sbjct: 60 DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVG 119
Query: 61 V-YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKC-WCIGCARRVFDLMLHRDVVSWTSMIA 118
+ +G+ H + ++ +D N +I Y KC +G A F + ++ VSW S+I+
Sbjct: 120 ILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIIS 179
Query: 119 GYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVG--TQIHGYAVKSGV 175
Y A +F+ M+ + P T ++ C+ T +V QI KSG+
Sbjct: 180 VYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGL 239
Query: 176 LMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAG---- 231
L D V + ++ +A GS +F+++ R+ + N L MVG + + G
Sbjct: 240 LTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGL-----MVGLVRQKWGEEAT 294
Query: 232 -LINEMQSLEGHSWNIETLTLVISAF-----AKCGNLSKGEGVHCLVIKTGFSDDV--LQ 283
L +M S+ S E+ +++S+F A+ L KG VH VI TG D + +
Sbjct: 295 KLFMDMNSMIDVS--PESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIG 352
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
L++ YAKCG + + ++F + K ++ +M++G QNG F+EA+ ++ M+ D++
Sbjct: 353 NGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDIL 412
Query: 344 IVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
+ L +CA+L KLG+ +HG +K ++ N+ + +++ +Y G ++
Sbjct: 413 PGSFTLISSLSSCASLKWAKLGQQIHGESLKL----GIDLNVSVSNALMTLYAETGYLNE 468
Query: 404 ARAVFDRMPVKDVIAWTSMIEGFGSHGFGF-EALKYFNLMMEHRMQPNSVTFLSLLSACS 462
R +F MP D ++W S+I EA+ F + N +TF S+LSA S
Sbjct: 469 CRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVS 528
Query: 463 HSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI 521
G +I+ ++K E ++ ++ +G+CG + I +M D+
Sbjct: 529 SLSFGELGKQIHGLALKNNIADEATTEN--ALIACYGKCGEMDGCEKIFSRMAERRDNVT 586
Query: 522 WGALLAASGVYGNKTLGE---------YTAQRLLELEPDNAGYHTLLS 560
W +++ SG N+ L + T QRL D+ Y T+LS
Sbjct: 587 WNSMI--SGYIHNELLAKALDLVWFMLQTGQRL-----DSFMYATVLS 627
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 211/424 (49%), Gaps = 11/424 (2%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
++++WN I G F A+ +K MR+ + +FT + +S++ A G+
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKW-AKLGQQ 436
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI-SER 124
H ++++G+DL++ N ++ Y + + R++F M D VSW S+I SER
Sbjct: 437 IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSER 496
Query: 125 HVSVACDLF-NKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
+ A F N R + N +T +L A + + +G QIHG A+K+ + + + +N
Sbjct: 497 SLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTEN 556
Query: 184 SVLRMYADKGSTEEVELLFSEI-NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
+++ Y G + E +FS + +RD +WN +IS Y + + L+ M G
Sbjct: 557 ALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQ-TGQ 615
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQ 301
+ V+SAFA L +G VH ++ SD V+ ++L+D Y+KCG+LD +++
Sbjct: 616 RLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALR 675
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI-WRNLLDACANLG 360
F + ++ + +M+SG+ ++G EA+ LF+ M+ + + + +L AC++ G
Sbjct: 676 FFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAG 735
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAW 419
L+ G H M + + + + + + ++ R G + ++MP+K +V+ W
Sbjct: 736 LLEEG-FKHFESMSDSYG--LAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIW 792
Query: 420 TSMI 423
+++
Sbjct: 793 RTVL 796
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/574 (21%), Positives = 259/574 (45%), Gaps = 28/574 (4%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTF-PVVNRALSSMRADAVY 62
E N+++WN I + G SA F M+ G +TF +V A S D
Sbjct: 167 EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRL 226
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
+ C + GL DL+ + ++ + K + AR+VF+ M R+ V+ ++ G +
Sbjct: 227 LEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVR 286
Query: 123 ERHVSVACDLFNKMRVELEPNSVTLIVMLQ-----ACCASTPLNVGTQIHGYAVKSGVLM 177
++ A LF M ++ + + +++L + L G ++HG+ + +G L+
Sbjct: 287 QKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTG-LV 345
Query: 178 DW--SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINE 235
D+ + N ++ MYA GS + +F + +D SWN +I+ G + +
Sbjct: 346 DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEA---VER 402
Query: 236 MQSLEGHSWNIETLTLVISAFAKCGNL---SKGEGVHCLVIKTGFSDDV-LQTSLLDFYA 291
+S+ H + TL IS+ + C +L G+ +H +K G +V + +L+ YA
Sbjct: 403 YKSMRRHDILPGSFTL-ISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYA 461
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQN-GSFMEAIALFQQMQAEDLVIVPEIWR 350
+ G L+ ++F + ++ +++ ++ S EA+ F Q + +
Sbjct: 462 ETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFS 521
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
++L A ++L +LG+ +HG +KN + E +++ Y + G + +F R
Sbjct: 522 SVLSAVSSLSFGELGKQIHGLALKN----NIADEATTENALIACYGKCGEMDGCEKIFSR 577
Query: 411 MP-VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSE 469
M +D + W SMI G+ + +AL M++ + +S + ++LSA + +
Sbjct: 578 MAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLER 637
Query: 470 GCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAAS 529
G ++ ++ +E + + +VD++ +CG + AL M + +S W ++++
Sbjct: 638 GMEV-HACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPV-RNSYSWNSMISGY 695
Query: 530 GVYGN--KTLGEYTAQRLL-ELEPDNAGYHTLLS 560
+G + L + +L + PD+ + +LS
Sbjct: 696 ARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/419 (20%), Positives = 190/419 (45%), Gaps = 20/419 (4%)
Query: 166 IHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGD 225
H K+ + D + N+++ Y + G + +F E+ R+ SW ++S YS G+
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 226 MMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSK--GEGVHCLVIKTGFS-DDVL 282
+ +M EG N V+ A + G++ G +H L+ K ++ D V+
Sbjct: 83 HKEALVFLRDMVK-EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVV 141
Query: 283 QTSLLDFYAKC-GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAED 341
L+ Y KC G + ++ F +I K+ ++ +++S + Q G A +F MQ +
Sbjct: 142 SNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDG 201
Query: 342 LVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNI 401
+ +L+ +L + R++ +M + + +L + + +++ + + G++
Sbjct: 202 SRPTEYTFGSLVTTACSLTEPDV-RLLE-QIMCTIQKSGLLTDLFVGSGLVSAFAKSGSL 259
Query: 402 SSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
S AR VF++M ++ + ++ G +G EA K F + M + + +++ LLS+
Sbjct: 260 SYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLF-MDMNSMIDVSPESYVILLSSF 318
Query: 462 SHSGLVSE-----GCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVIL 516
L E G +++ + ++ + +V+++ +CG + +A + M
Sbjct: 319 PEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTD- 377
Query: 517 PDSRIWGALLAASGVYGN--KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAG-RWNEV 572
DS W +++ G + + Y + R ++ P G TL+S++ + A +W ++
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP---GSFTLISSLSSCASLKWAKL 433
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
+G R H L KN ++ ++++ +++N Y+ G+ SAR VFD MP+++ ++
Sbjct: 14 VGHRGAARFFHSRLYKN----RLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVS 69
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
W ++ G+ +G EAL + M++ + N F+S+L AC G V
Sbjct: 70 WACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 197/626 (31%), Positives = 333/626 (53%), Gaps = 25/626 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV-YGKM 65
+ ++W+ + + + G+ A+ F + ++G+ + + + V RA S+ +D V G++
Sbjct: 130 DVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSN--SDFVGVGRV 187
Query: 66 THCVAIQMG-LDLDLYFCNTMIDFYVKCW-CIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
T ++ G + D+ ++ID +VK A +VFD M +VV+WT MI +
Sbjct: 188 TLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 124 RHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
A F M + E + TL + AC L++G Q+H +A++SG++ D V+
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305
Query: 183 NSVLRMYAD---KGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVA-GLINEMQS 238
S++ MYA GS ++ +F + V SW LI+ Y ++ A L +EM +
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 239 LEGHSWNIETLTLVIS-AFAKCGNLSK---GEGVHCLVIKTGF-SDDVLQTSLLDFYAKC 293
+GH +E S AF CGNLS G+ V K G S+ + S++ + K
Sbjct: 366 -QGH---VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKS 421
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLL 353
+++ + + F + K+ ++ + G +N +F +A L ++ +L + + +LL
Sbjct: 422 DRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLL 481
Query: 354 DACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV 413
AN+G+++ G +H ++K + N + ++++MY + G+I +A VF+ M
Sbjct: 482 SGVANVGSIRKGEQIHSQVVK----LGLSCNQPVCNALISMYSKCGSIDTASRVFNFMEN 537
Query: 414 KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKI 473
++VI+WTSMI GF HGF L+ FN M+E ++PN VT++++LSACSH GLVSEG +
Sbjct: 538 RNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRH 597
Query: 474 YYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
+ SM I+P ++H+ CMVDL R G++ +A I M D +W L A V+
Sbjct: 598 FNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHS 657
Query: 534 NKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
N LG+ A+++LEL+P+ + LSN+ A AG+W E E+RR+M E++L K+ G S I
Sbjct: 658 NTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWI 717
Query: 594 EVKGVSYGFLSGDITHPEAEEIYAAL 619
EV + F GD HP A +IY L
Sbjct: 718 EVGDKIHKFYVGDTAHPNAHQIYDEL 743
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 143/563 (25%), Positives = 273/563 (48%), Gaps = 29/563 (5%)
Query: 15 IRTHVDLGQFHSALSTFKKMRQMGV-PHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQM 73
I H++ G A+S M + G+ P D+ TF + ++ R D GK+ H I+
Sbjct: 33 ILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRAR-DFRLGKLVHARLIEF 91
Query: 74 GLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLH---RDVVSWTSMIAGYISERHVSVAC 130
++ D N++I Y K A VF+ M RDVVSW++M+A Y + A
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 131 DLFNK-MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL-MDWSVKNSVLRM 188
+F + + + L PN +++AC S + VG G+ +K+G D V S++ M
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDM 211
Query: 189 YAD-KGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
+ + S E +F ++++ +V +W ++I+ +G +M L G +
Sbjct: 212 FVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM-VLSGFESDKF 270
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKC---GKLDISVQLFR 304
TL+ V SA A+ NLS G+ +H I++G DDV + SL+D YAKC G +D ++F
Sbjct: 271 TLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV-ECSLVDMYAKCSADGSVDDCRKVFD 329
Query: 305 EIHFKSYITLGAMMSGFIQNGSF-MEAIALFQQMQAEDLVIVPEI-WRNLLDACANLGAL 362
+ S ++ A+++G+++N + EAI LF +M + V + + AC NL
Sbjct: 330 RMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDP 389
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
++G+ V G F + N + S+++M+++ + A+ F+ + K+++++ +
Sbjct: 390 RVGKQVLG----QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 423 IEGFGSHGFGFE-ALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS-MKWG 480
++G FE A K + + E + ++ TF SLLS ++ G + +G +I+ +K G
Sbjct: 446 LDG-TCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 481 FGI-EPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGE 539
+P + ++ ++ +CG + A S + + + W +++ +G
Sbjct: 505 LSCNQPVCN---ALISMYSKCGSIDTA-SRVFNFMENRNVISWTSMITGFAKHGFAIRVL 560
Query: 540 YTAQRLLE--LEPDNAGYHTLLS 560
T +++E ++P+ Y +LS
Sbjct: 561 ETFNQMIEEGVKPNEVTYVAILS 583
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 295 bits (754), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 191/544 (35%), Positives = 295/544 (54%), Gaps = 18/544 (3%)
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLM--LHRDVVSWTSMIAG 119
+ + H I G + ++ +++ + Y++ + A F+ + R+ SW ++++G
Sbjct: 22 HTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSG 81
Query: 120 YISERHV--SVACDLFNKMRVELEP-NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
Y + S L+N+MR + +S L+ ++AC L G IHG A+K+G+
Sbjct: 82 YSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLD 141
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
D V S++ MYA G+ E + +F EI R+ W +L+ Y V L M
Sbjct: 142 KDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLM 201
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNL---SKGEGVHCLVIKTGFSD--DVLQTSLLDFYA 291
+ G + + TL ++ A CGN+ G+ VH + I+ F D D LQ S++D Y
Sbjct: 202 RD-TGLALDALTLICLVKA---CGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYV 257
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
KC LD + +LF ++ + ++SGF + +EA LF+QM E ++
Sbjct: 258 KCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAA 317
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
+L +C++LG+L+ G+ VHGY+++N +E + TS ++MY R GNI AR VFD M
Sbjct: 318 ILVSCSSLGSLRHGKSVHGYMIRN----GIEMDAVNFTSFIDMYARCGNIQMARTVFDMM 373
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
P ++VI+W+SMI FG +G EAL F+ M + PNSVTF+SLLSACSHSG V EG
Sbjct: 374 PERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGW 433
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGV 531
K + SM +G+ P +H+ CMVDL GR G + EA S I M + P + WGALL+A +
Sbjct: 434 KQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRI 493
Query: 532 YGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
+ L A++LL +EP+ + + LLSN+ A AG W V +RR+M K +K G S
Sbjct: 494 HKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQS 553
Query: 592 CIEV 595
EV
Sbjct: 554 ATEV 557
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 138/269 (51%), Gaps = 27/269 (10%)
Query: 252 VISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHF-- 308
+++ ++ L+ + VH VI GF D+ VL +SL + Y + +LD + F I
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 309 KSYITLGAMMSGFIQNGS--FMEAIALFQQMQAE-------DLVIVPEIWRNLLDACANL 359
++ + ++SG+ ++ + + + + L+ +M+ +LV + AC L
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA-------IKACVGL 122
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
G L+ G ++HG MKN ++ + ++ S++ MY + G + SA+ VFD +PV++ + W
Sbjct: 123 GLLENGILIHGLAMKN----GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLW 178
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSH--SGLVSEGCKIYYSM 477
+++G+ + E + F LM + + +++T + L+ AC + +G V + C S+
Sbjct: 179 GVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGK-CVHGVSI 237
Query: 478 KWGFGIEPALDHHTCMVDLFGRCGMVKEA 506
+ F I+ + ++D++ +C ++ A
Sbjct: 238 RRSF-IDQSDYLQASIIDMYVKCRLLDNA 265
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 4/215 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N + W I + A F++M + + + T + + SS+ +GK
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSL-GSLRHGKSV 334
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H I+ G+++D + ID Y +C I AR VFD+M R+V+SW+SMI +
Sbjct: 335 HGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLF 394
Query: 127 SVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVG-TQIHGYAVKSGVLMDWSVKNS 184
A D F+KM+ + + PNSVT + +L AC S + G Q GV+ +
Sbjct: 395 EEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC 454
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVAS-WNILIS 218
++ + G E + + + +AS W L+S
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 188/628 (29%), Positives = 327/628 (52%), Gaps = 35/628 (5%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMG-----VPHDTFTFPVVNRALSSMRADAV 61
N ++WN IR D G + +M + +P D T V + R +
Sbjct: 252 NLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP-DVATLVTVLPVCAREREIGL 310
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
GK H A+++ LD +L N ++D Y KC CI A+ +F + +++VVSW +M+ G+
Sbjct: 311 -GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFS 369
Query: 122 SERHVSVACDLFNKMRV---ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
+E D+ +M +++ + VT++ + C + L ++H Y++K + +
Sbjct: 370 AEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYN 429
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGD---------MMRV 229
V N+ + YA GS + +F I + V SWN LI ++ D M++
Sbjct: 430 ELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKI 489
Query: 230 AGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLD 288
+GL+ + S+ + +L +SA +K +L G+ VH +I+ D+ + S+L
Sbjct: 490 SGLLPD-------SFTVCSL---LSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLS 539
Query: 289 FYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI 348
Y CG+L LF + KS ++ +++G++QNG A+ +F+QM + +
Sbjct: 540 LYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 599
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
+ AC+ L +L+LGR H Y +K+L +E + + S+++MY + G+I+ + VF
Sbjct: 600 MMPVFGACSLLPSLRLGREAHAYALKHL----LEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
+ + K +W +MI G+G HG EA+K F M P+ +TFL +L+AC+HSGL+
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIIL-KMVILPDSRIWGALLA 527
EG + MK FG++P L H+ C++D+ GR G + +AL ++ +M D IW +LL+
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Query: 528 ASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKK 587
+ ++ N +GE A +L ELEP+ + LLSN+ A G+W +V ++R+ M+E L+K
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Query: 588 PGWSCIEVKGVSYGFLSGDITHPEAEEI 615
G S IE+ + F+ G+ EEI
Sbjct: 836 AGCSWIELNRKVFSFVVGERFLDGFEEI 863
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 188/418 (44%), Gaps = 13/418 (3%)
Query: 54 SSMRADAVYGKMTH-CVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVS 112
S R D G+ H V+ L D C +I Y C +R VFD + +++
Sbjct: 94 SGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQ 153
Query: 113 WTSMIAGYISERHVSVACDLFNKM--RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYA 170
W ++I+ Y + F +M +L P+ T +++AC + + +G +HG
Sbjct: 154 WNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLV 213
Query: 171 VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVA 230
VK+G++ D V N+++ Y G + LF + +R++ SWN +I +S G
Sbjct: 214 VKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESF 273
Query: 231 GLINEMQSLEGHSW---NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSL 286
L+ EM G ++ TL V+ A+ + G+GVH +K + VL +L
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 287 LDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQA--EDLVI 344
+D Y+KCG + + +F+ + K+ ++ M+ GF G + +QM A ED+
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKA 393
Query: 345 VPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSA 404
N + C + L + +H Y +K F V L + + + Y + G++S A
Sbjct: 394 DEVTILNAVPVCFHESFLPSLKELHCYSLKQEF---VYNEL-VANAFVASYAKCGSLSYA 449
Query: 405 RAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
+ VF + K V +W ++I G +L M + P+S T SLLSACS
Sbjct: 450 QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 182/626 (29%), Positives = 323/626 (51%), Gaps = 13/626 (2%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALST---FKKMRQMGVPHDTFTFPVVNRALSSMRADAVY 62
+ ++WN I + G S+ + F++MR + + +T + +A SS+++ V
Sbjct: 78 KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTV- 136
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G+ H + ++M D+Y +++ Y K + +VF M R+ +W++M++GY +
Sbjct: 137 GRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYAT 196
Query: 123 ERHVSVACDLFNKMRVELEPNS---VTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
V A +FN E E S +L + A+ + +G QIH +K+G+L
Sbjct: 197 RGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFV 256
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
++ N+++ MY+ S E +F R+ +W+ +++ YS G+ + L + M S
Sbjct: 257 ALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS- 315
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDI 298
G + T+ V++A + L +G+ +H ++K GF + T+ L+D YAK G L
Sbjct: 316 AGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLAD 375
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
+ + F + + +++SG++QN EA+ L+++M+ ++ ++L AC++
Sbjct: 376 ARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSS 435
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
L L+LG+ VHG+ +K+ F V + +++ MY + G++ VF R P KDV++
Sbjct: 436 LATLELGKQVHGHTIKHGFGLEVP----IGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
W +MI G +G G EAL+ F M+ M+P+ VTF++++SACSH G V G + M
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
G++P +DH+ CMVDL R G +KEA I I +W LL+A +G LG
Sbjct: 552 DQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611
Query: 539 EYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGV 598
Y ++L+ L + + LS + + GR +VE + + M + K+ G S IE+K
Sbjct: 612 VYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQ 671
Query: 599 SYGFLSGDITHPEAEEIYAALCTLSR 624
+ F+ GD HP EE +C +SR
Sbjct: 672 YHVFVVGDTMHPMIEETKDLVCLVSR 697
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 140/515 (27%), Positives = 262/515 (50%), Gaps = 16/515 (3%)
Query: 55 SMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWT 114
S + + V G+ H I+ G + N +++FY KC + A +F+ ++ +DVVSW
Sbjct: 25 SQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWN 84
Query: 115 SMIAGYISERHVS---VACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYA 170
S+I GY +S LF +MR + + PN+ TL + +A + VG Q H
Sbjct: 85 SLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALV 144
Query: 171 VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVA 230
VK D V S++ MY G E+ +F+ + +R+ +W+ ++S Y+ G +
Sbjct: 145 VKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAI 204
Query: 231 GLINE-MQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLD 288
+ N ++ E S + T V+S+ A + G +HC+ IK G V L +L+
Sbjct: 205 KVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 289 FYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI 348
Y+KC L+ + ++F ++ IT AM++G+ QNG +EA+ LF +M + +
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
+L+AC+++ L+ G+ +H +L+K F E +L T++++MY + G ++ AR F
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGF----ERHLFATTALVDMYAKAGCLADARKGF 380
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
D + +DV WTS+I G+ + EAL + M + PN T S+L ACS +
Sbjct: 381 DCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLE 440
Query: 469 EGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLA 527
G +++ +++K GFG+E + + + ++ +CG +++ +++ + D W A+++
Sbjct: 441 LGKQVHGHTIKHGFGLEVPIG--SALSTMYSKCGSLEDG-NLVFRRTPNKDVVSWNAMIS 497
Query: 528 --ASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLS 560
+ G++ L + +EPD+ + ++S
Sbjct: 498 GLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIIS 532
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 181/376 (48%), Gaps = 12/376 (3%)
Query: 137 RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTE 196
+ EL P++ TL+ L L G +HG +++G N ++ YA G
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 197 EVELLFSEINKRDVASWNILISFYSMVGDM---MRVAGLINEMQSLEGHSWNIETLTLVI 253
+ +F+ I +DV SWN LI+ YS G + V L EM++ + N TL +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILP-NAYTLAGIF 125
Query: 254 SAFAKCGNLSKGEGVHCLVIK-TGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYI 312
A + + + G H LV+K + F D + TSL+ Y K G ++ +++F + ++
Sbjct: 126 KAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTY 185
Query: 313 TLGAMMSGFIQNGSFMEAIALFQQM--QAEDLVIVPEIWRNLLDACANLGALKLGRVVHG 370
T M+SG+ G EAI +F + E+ ++ +L + A + LGR +H
Sbjct: 186 TWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHC 245
Query: 371 YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHG 430
+KN G V + +++ MY + +++ A +FD ++ I W++M+ G+ +G
Sbjct: 246 ITIKNGLLGFVA----LSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNG 301
Query: 431 FGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH 490
EA+K F+ M ++P+ T + +L+ACS + EG K +S G E L
Sbjct: 302 ESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEG-KQLHSFLLKLGFERHLFAT 360
Query: 491 TCMVDLFGRCGMVKEA 506
T +VD++ + G + +A
Sbjct: 361 TALVDMYAKAGCLADA 376
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 184/617 (29%), Positives = 307/617 (49%), Gaps = 10/617 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQM--GVPHDTFTFPVVNRALSSMRADAVYGK 64
+ ++W I+ +V AL F MR + V DT VV +A ++ YG+
Sbjct: 70 DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACG-QSSNIAYGE 128
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H A++ L +Y ++++D Y + I + RVF M R+ V+WT++I G +
Sbjct: 129 SLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAG 188
Query: 125 HVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
F++M R E ++ T + L+AC + G IH + + G + V N
Sbjct: 189 RYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVAN 248
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
S+ MY + G ++ LF +++RDV SW LI Y +G ++ +M++ +
Sbjct: 249 SLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPP 308
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQL 302
N +T + SA A L GE +HC V+ G +D + + S++ Y+ CG L + L
Sbjct: 309 -NEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL 367
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
F+ + + I+ ++ G+ Q G E F M+ +LL N+ +
Sbjct: 368 FQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI 427
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
+ GR VH + F +E N + +S++NMY + G+I A +F D+++ T+M
Sbjct: 428 EGGRQVHALAL--CFG--LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAM 483
Query: 423 IEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
I G+ HG EA+ F ++ +P+SVTF+S+L+AC+HSG + G + M+ +
Sbjct: 484 INGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYN 543
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTA 542
+ PA +H+ CMVDL R G + +A +I +M D +W LL A G+ G A
Sbjct: 544 MRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAA 603
Query: 543 QRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGF 602
+R+LEL+P A L+N+ +S G E +R+ M K + K+PGWS I++K F
Sbjct: 604 ERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAF 663
Query: 603 LSGDITHPEAEEIYAAL 619
+SGD HP++E+IY L
Sbjct: 664 VSGDRFHPQSEDIYNIL 680
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 140/526 (26%), Positives = 250/526 (47%), Gaps = 48/526 (9%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRV---ELEPNSVTLIVMLQAC 154
AR+VFD M H D+VSWTS+I Y++ + A LF+ MRV + P++ L V+L+AC
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 155 CASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWN 214
S+ + G +H YAVK+ +L V +S+L MY G ++ +FSE+ R+ +W
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 215 ILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIK 274
+I+ G +EM E S + T + + A A + G+ +H VI
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEELS-DTYTFAIALKACAGLRQVKYGKAIHTHVIV 237
Query: 275 TGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIAL 333
GF + + SL Y +CG++ + LF + + ++ +++ + + G ++A+
Sbjct: 238 RGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVET 297
Query: 334 FQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN 393
F +M+ + + + ++ ACA+L L G +H N+ + + +L + S++
Sbjct: 298 FIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHC----NVLSLGLNDSLSVSNSMMK 353
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
MY GN+ SA +F M +D+I+W+++I G+ GFG E KYF+ M + +P
Sbjct: 354 MYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSII--- 510
SLLS + ++ EG + +++ FG+E + +++++ +CG +KEA I
Sbjct: 414 LASLLSVSGNMAVI-EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGET 472
Query: 511 -------------------------------LKMVILPDSRIWGALLAASGVYGNKTLGE 539
LK+ PDS + ++L A G LG
Sbjct: 473 DRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGF 532
Query: 540 Y---TAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEK 582
+ Q + P Y ++ ++ AGR ++ E++ EMS K
Sbjct: 533 HYFNMMQETYNMRPAKEHYGCMV-DLLCRAGRLSDAEKMINEMSWK 577
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 120/271 (44%), Gaps = 10/271 (3%)
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRN 351
G L + Q+F ++ ++ +++ ++ + EA+ LF M+ D + P+ +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
+L AC + G +H Y +K + ++++ +S+L+MY R G I + VF M
Sbjct: 114 VLKACGQSSNIAYGESLHAYAVKT----SLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
P ++ + WT++I G G E L YF+ M ++ TF L AC+ V G
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYG- 228
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGV 531
K ++ G L + ++ CG +++ L + M D W +L+ A
Sbjct: 229 KAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKR 287
Query: 532 YGN--KTLGEYTAQRLLELEPDNAGYHTLLS 560
G K + + R ++ P+ + ++ S
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFS 318
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 84/165 (50%), Gaps = 16/165 (9%)
Query: 375 NLFNGPVEGNLHM----------ETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
+L PVE N+ S L I GN+ +AR VFD+MP D+++WTS+I+
Sbjct: 20 SLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIK 79
Query: 425 GFGSHGFGFEALKYFNLM--MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGF 481
+ + EAL F+ M ++H + P++ +L AC S ++ G ++ Y++K
Sbjct: 80 RYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVK--T 137
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALL 526
+ ++ + ++D++ R G + ++ + +M ++ W A++
Sbjct: 138 SLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP-FRNAVTWTAII 181
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 171/557 (30%), Positives = 300/557 (53%), Gaps = 11/557 (1%)
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H +++G D + + +I+ Y C + AR VF+ +L +D+V W +++ Y+ +
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 127 SVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
+ L + MR+ PN+ T L+A + +HG +K+ ++D V +
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
L++Y G + +F+E+ K DV W+ +I+ + G L M+ N
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVP-N 347
Query: 246 IETLTLVIS--AFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQL 302
TL+ +++ A KC L GE +H LV+K GF D+ + +L+D YAKC K+D +V+L
Sbjct: 348 EFTLSSILNGCAIGKCSGL--GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
F E+ K+ ++ ++ G+ G +A ++F++ + + + + L ACA+L ++
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
LG VHG +K V + S+++MY + G+I A++VF+ M DV +W ++
Sbjct: 466 DLGVQVHGLAIKTNNAKKVA----VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521
Query: 423 IEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
I G+ +HG G +AL+ ++M + +PN +TFL +LS CS++GL+ +G + + SM G
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTA 542
IEP L+H+TCMV L GR G + +A+ +I + P IW A+L+AS N+ +A
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSA 641
Query: 543 QRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGF 602
+ +L++ P + + L+SN+ A A +W V +R+ M E +KK+PG S IE +G + F
Sbjct: 642 EEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYF 701
Query: 603 LSGDITHPEAEEIYAAL 619
G HP+ + I L
Sbjct: 702 SVGLSDHPDMKLINGML 718
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 234/497 (47%), Gaps = 17/497 (3%)
Query: 57 RADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSM 116
+ D + K HC ++ G LDL+ N +++ YVK A +FD M R+ VS+ ++
Sbjct: 62 KNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTL 121
Query: 117 IAGYISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
GY + + + L + EL P+ T L+ + + +H VK G
Sbjct: 122 AQGYACQDPIGLYSRLHREGH-ELNPHVFT--SFLKLFVSLDKAEICPWLHSPIVKLGYD 178
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
+ V +++ Y+ GS + +F I +D+ W ++S Y G L++ M
Sbjct: 179 SNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGK 295
+ + G N T + A G +GVH ++KT + D + LL Y + G
Sbjct: 239 R-MAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGD 297
Query: 296 LDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDA 355
+ + ++F E+ + M++ F QNG EA+ LF +M+ +V ++L+
Sbjct: 298 MSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNG 357
Query: 356 CANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD 415
CA LG +HG ++K F + ++++ +++++Y + + +A +F + K+
Sbjct: 358 CAIGKCSGLGEQLHGLVVKVGF----DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKN 413
Query: 416 VIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY- 474
++W ++I G+ + G G +A F + +++ VTF S L AC+ + G +++
Sbjct: 414 EVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHG 473
Query: 475 YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN 534
++K + A+ + ++D++ +CG +K A S+ +M + D W AL++ +G
Sbjct: 474 LAIKTNNAKKVAVSNS--LIDMYAKCGDIKFAQSVFNEMETI-DVASWNALISGYSTHG- 529
Query: 535 KTLGEYTAQRLLELEPD 551
LG A R+L++ D
Sbjct: 530 --LGR-QALRILDIMKD 543
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 192/423 (45%), Gaps = 10/423 (2%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ + W + +V+ G F +L MR G + +TF +A + A + K
Sbjct: 211 DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA-FDFAKGV 269
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H ++ LD ++ Y + + A +VF+ M DVV W+ MIA +
Sbjct: 270 HGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFC 329
Query: 127 SVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
+ A DLF +MR + PN TL +L C +G Q+HG VK G +D V N++
Sbjct: 330 NEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNAL 389
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ +YA + LF+E++ ++ SWN +I Y +G+ + + E +L
Sbjct: 390 IDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE--ALRNQVSV 447
Query: 246 IE-TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLF 303
E T + + A A ++ G VH L IKT + V + SL+D YAKCG + + +F
Sbjct: 448 TEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVF 507
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
E+ + A++SG+ +G +A+ + M+ D + +L C+N G +
Sbjct: 508 NEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLID 567
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSM 422
G+ +++ + +E L T ++ + R G + A + + +P + V+ W +M
Sbjct: 568 QGQECFESMIR---DHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAM 624
Query: 423 IEG 425
+
Sbjct: 625 LSA 627
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 161/323 (49%), Gaps = 6/323 (1%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E N+ + W+ I G + A+ F +MR+ V + FT + + + +
Sbjct: 307 EMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGL 366
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
G+ H + +++G DLD+Y N +ID Y KC + A ++F + ++ VSW ++I GY
Sbjct: 367 -GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYE 425
Query: 122 SERHVSVACDLFNK-MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ A +F + +R ++ VT L AC + +++G Q+HG A+K+ +
Sbjct: 426 NLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVA 485
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V NS++ MYA G + + +F+E+ DVASWN LIS YS G + +++ M+ +
Sbjct: 486 VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRD 545
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ--TSLLDFYAKCGKLDI 298
N T V+S + G + +G+ +I+ + L+ T ++ + G+LD
Sbjct: 546 CKP-NGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 299 SVQLFREIHFKSYITL-GAMMSG 320
+++L I ++ + + AM+S
Sbjct: 605 AMKLIEGIPYEPSVMIWRAMLSA 627
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 167/367 (45%), Gaps = 15/367 (4%)
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
ML+ C IH +K G +D N +L Y G ++ LF E+ +R+
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
S+ L Y+ + GL + + EGH N T + F +H
Sbjct: 115 NVSFVTLAQGYACQDPI----GLYSRLHR-EGHELNPHVFTSFLKLFVSLDKAEICPWLH 169
Query: 270 CLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
++K G+ S+ + +L++ Y+ CG +D + +F I K + ++S +++NG F
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE 229
Query: 329 EAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFN-GPVEGNLHM 387
+++ L M+ + + L A LGA + VHG ++K + P G
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG---- 285
Query: 388 ETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRM 447
+L +Y + G++S A VF+ MP DV+ W+ MI F +GF EA+ F M E +
Sbjct: 286 -VGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV 344
Query: 448 QPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEA 506
PN T S+L+ C+ G +++ +K GF ++ + + ++D++ +C + A
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSN--ALIDVYAKCEKMDTA 402
Query: 507 LSIILKM 513
+ + ++
Sbjct: 403 VKLFAEL 409
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 198/656 (30%), Positives = 321/656 (48%), Gaps = 104/656 (15%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLML---------------- 106
++ HC I+ GL +Y N +++ Y K AR++FD M
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 107 ---------------HRDVVSWTSMIAGY--ISERHVSVACDLFNKMRVELEPNSVTLIV 149
RD VSWT+MI GY I + H ++ + + ++ +EP TL
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRV-MGDMVKEGIEPTQFTLTN 151
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
+L + A+ + G ++H + VK G+ + SV NS+L MYA G + +F + RD
Sbjct: 152 VLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRD 211
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE---------------------- 247
++SWN +I+ + VG M +M + +WN
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 248 ---------TLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLD 297
TL V+SA A L G+ +H ++ TGF ++ +L+ Y++CG ++
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 298 ISVQLFREIHFKS------------YITLG---------------------AMMSGFIQN 324
+ +L + K YI LG AM+ G+ Q+
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 325 GSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGN 384
GS+ EAI LF+ M +L ++L +L G+ +HG +K+ G + +
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS---GEIY-S 447
Query: 385 LHMETSILNMYIRGGNISSARAVFDRMPV-KDVIAWTSMIEGFGSHGFGFEALKYFNLMM 443
+ + +++ MY + GNI+SA FD + +D ++WTSMI HG EAL+ F M+
Sbjct: 448 VSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETML 507
Query: 444 EHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMV 503
++P+ +T++ + SAC+H+GLV++G + + MK I P L H+ CMVDLFGR G++
Sbjct: 508 MEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 504 KEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVK 563
+EA I KM I PD WG+LL+A V+ N LG+ A+RLL LEP+N+G ++ L+N+
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLY 627
Query: 564 ASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
++ G+W E ++R+ M + +KK+ G+S IEVK + F D THPE EIY +
Sbjct: 628 SACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTM 683
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 232/546 (42%), Gaps = 81/546 (14%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
++++W I + ++GQ+H A+ M + G+ FT V ++++ R GK
Sbjct: 110 DSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMET-GKKV 168
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY------ 120
H +++GL ++ N++++ Y KC A+ VFD M+ RD+ SW +MIA +
Sbjct: 169 HSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQM 228
Query: 121 ---------ISERHVSV----------------ACDLFNKMRVE--LEPNSVTLIVMLQA 153
++ER + A D+F+KM + L P+ TL +L A
Sbjct: 229 DLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSA 288
Query: 154 CCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTE----------------- 196
C L +G QIH + V +G + V N+++ MY+ G E
Sbjct: 289 CANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIE 348
Query: 197 ----------------EVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
+ + +F + RDV +W +I Y G L M
Sbjct: 349 GFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVG-G 407
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDIS 299
G N TL ++S + +LS G+ +H +K+G V + +L+ YAK G + +
Sbjct: 408 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 467
Query: 300 VQLFREIHF-KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
+ F I + ++ +M+ Q+G EA+ LF+ M E L + + AC +
Sbjct: 468 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 527
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVI 417
G + GR +MK++ + L +++++ R G + A+ ++MP++ DV+
Sbjct: 528 AGLVNQGRQYFD-MMKDV--DKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 418 AWTSMIEGFGSH---GFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
W S++ H G A + L++E +L SAC G E KI
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERL-LLLEPENSGAYSALANLYSAC---GKWEEAAKIR 640
Query: 475 YSMKWG 480
SMK G
Sbjct: 641 KSMKDG 646
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 140/331 (42%), Gaps = 75/331 (22%)
Query: 249 LTLVISAFAKCGNLSKG----EGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLF 303
L L + K N S G + VHC VIK+G V L +L++ Y+K G + +LF
Sbjct: 13 LELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLF 72
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV-------------------- 343
E+ ++ + ++S + + G F Q+ D V
Sbjct: 73 DEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIR 132
Query: 344 ---------IVPEIW--RNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSIL 392
I P + N+L + A ++ G+ VH +++K + GN+ + S+L
Sbjct: 133 VMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKL----GLRGNVSVSNSLL 188
Query: 393 NMYIRGGNISSARAVFDRMPV-------------------------------KDVIAWTS 421
NMY + G+ A+ VFDRM V +D++ W S
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNS 248
Query: 422 MIEGFGSHGFGFEALKYFNLMM-EHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKW 479
MI GF G+ AL F+ M+ + + P+ T S+LSAC++ + G +I+ + +
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTT 308
Query: 480 GFGIEPALDHHTCMVDLFGRCGMVKEALSII 510
GF I + ++ ++ RCG V+ A +I
Sbjct: 309 GFDISGIV--LNALISMYSRCGGVETARRLI 337
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 77/164 (46%), Gaps = 3/164 (1%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
+ + +AW I + G + A++ F+ M G +++T + SS+ + +G
Sbjct: 374 KDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLAS-LSHG 432
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLM-LHRDVVSWTSMIAGYIS 122
K H A++ G + N +I Y K I A R FDL+ RD VSWTSMI
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 123 ERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQ 165
H A +LF M +E L P+ +T + + AC + +N G Q
Sbjct: 493 HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ 536
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 284/522 (54%), Gaps = 36/522 (6%)
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
+P + T ++Q C + L G ++H + SG + + N +LRMYA GS +
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARK 141
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW---------------- 244
+F E+ RD+ SWN++++ Y+ VG + L +EM + +SW
Sbjct: 142 VFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEA 201
Query: 245 ---------------NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLD 288
NI T+++ ++A A + +G+ +H +++ G SD+VL +SL+D
Sbjct: 202 LVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMD 261
Query: 289 FYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI 348
Y KCG +D + +F +I K ++ +M+ + ++ + E +LF ++
Sbjct: 262 MYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYT 321
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
+ +L+ACA+L +LG+ VHGY+ + F+ P +S+++MY + GNI SA+ V
Sbjct: 322 FAGVLNACADLTTEELGKQVHGYMTRVGFD-PYS---FASSSLVDMYTKCGNIESAKHVV 377
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
D P D+++WTS+I G +G EALKYF+L+++ +P+ VTF+++LSAC+H+GLV
Sbjct: 378 DGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVE 437
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
+G + +YS+ + DH+TC+VDL R G ++ S+I +M + P +W ++L
Sbjct: 438 KGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGG 497
Query: 529 SGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKP 588
YGN L E AQ L ++EP+N + ++N+ A+AG+W E ++R+ M E + K+P
Sbjct: 498 CSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRP 557
Query: 589 GWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
G S E+K + F++ D +HP +I L L + ++ G
Sbjct: 558 GSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEG 599
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 184/414 (44%), Gaps = 27/414 (6%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
DL N M++ Y + + AR++FD M +D SWT+M+ GY+ + A L++ M+
Sbjct: 150 DLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQ 209
Query: 138 --VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGST 195
PN T+ + + A A + G +IHG+ V++G+ D + +S++ MY G
Sbjct: 210 RVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCI 269
Query: 196 EEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISA 255
+E +F +I ++DV SW +I Y L +E+ N T V++A
Sbjct: 270 DEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG-SCERPNEYTFAGVLNA 328
Query: 256 FAKCGNLSKGEGVHCLVIKTGFSD-DVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITL 314
A G+ VH + + GF +SL+D Y KCG ++ + + ++
Sbjct: 329 CADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSW 388
Query: 315 GAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
+++ G QNG EA+ F + + N+L AC + G ++ G
Sbjct: 389 TSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGL-------- 440
Query: 375 NLFNGPVEGNLHMETS-----ILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGS 428
F E + TS ++++ R G ++V MP+K W S++ G +
Sbjct: 441 EFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCST 500
Query: 429 HG---FGFEALKYFNLMMEHRMQP-NSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
+G EA + +++P N VT++++ + + +G E K+ M+
Sbjct: 501 YGNIDLAEEAAQEL-----FKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQ 549
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 154/351 (43%), Gaps = 19/351 (5%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPH---DTFTFPVVNRALSSMRADAVY 62
++ +W + +V Q AL + M++ VP+ + FT + A ++++
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQR--VPNSRPNIFTVSIAVAAAAAVKC-IRR 236
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
GK H ++ GLD D ++++D Y KC CI AR +FD ++ +DVVSWTSMI Y
Sbjct: 237 GKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFK 296
Query: 123 ERHVSVACDLFNKMRVELE-PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
LF+++ E PN T +L AC T +G Q+HGY + G
Sbjct: 297 SSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG---DMMRVAGLINEMQS 238
+S++ MY G+ E + + K D+ SW LI + G + ++ L+ + +
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKG-EGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKL 296
H T V+SA G + KG E + + K S T L+D A+ G+
Sbjct: 417 KPDHV----TFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE 347
+ + E+ K L A + G S I L ++ E I PE
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLG---GCSTYGNIDLAEEAAQELFKIEPE 520
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 306/561 (54%), Gaps = 29/561 (5%)
Query: 76 DLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNK 135
D ++ N ++ Y+K I AR+VFDLM R+VVSWT+++ GY+ V VA LF K
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 136 MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGST 195
M E N V+ VML ++ +++ D + S++ +G
Sbjct: 136 MP---EKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRV 188
Query: 196 EEVELLFSEINKRDVASWNILISFY---SMVGDMMRVAGLINEMQSLEGHSWNIETLTLV 252
+E +F E+++R V +W +++ Y + V D ++ ++ E + SW T +
Sbjct: 189 DEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV---SW-----TSM 240
Query: 253 ISAFAKCGNLSKGEGV-HCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSY 311
+ + + G + E + + +K + + + + L + G++ + ++F + ++
Sbjct: 241 LMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGL----GQKGEIAKARRVFDSMKERND 296
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
+ ++ +NG +EA+ LF MQ + + ++L CA+L +L G+ VH
Sbjct: 297 ASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQ 356
Query: 372 LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGF 431
L++ F+ ++++ + ++ MYI+ G + ++ +FDR P KD+I W S+I G+ SHG
Sbjct: 357 LVRCQFDV----DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGL 412
Query: 432 GFEALKYF-NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH 490
G EALK F + + +PN VTF++ LSACS++G+V EG KIY SM+ FG++P H+
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHY 472
Query: 491 TCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEP 550
CMVD+ GR G EA+ +I M + PD+ +WG+LL A + + E+ A++L+E+EP
Sbjct: 473 ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEP 532
Query: 551 DNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDI-TH 609
+N+G + LLSN+ AS GRW +V ELR+ M + ++K PG S EV+ + F G I +H
Sbjct: 533 ENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSH 592
Query: 610 PEAEEIYAALCTLSRVTQDFG 630
PE E I L L + ++ G
Sbjct: 593 PEQESILKILDELDGLLREAG 613
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 177/426 (41%), Gaps = 23/426 (5%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++W ++ +V G+ A S F KM + ++T ++ DA
Sbjct: 109 NVVSWTALVKGYVHNGKVDVAESLFWKMPEKN--KVSWTVMLIGFLQDGRIDDA------ 160
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
C +M D D +MI K + AR +FD M R V++WT+M+ GY V
Sbjct: 161 -CKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRV 219
Query: 127 SVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVL 186
A +F+ M E V+ ML + + ++ V+ N+++
Sbjct: 220 DDARKIFDVMP---EKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVI----ACNAMI 272
Query: 187 RMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
KG + +F + +R+ ASW +I + G + L MQ +G
Sbjct: 273 SGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK-QGVRPTF 331
Query: 247 ETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFRE 305
TL ++S A +L G+ VH +++ F DV S L+ Y KCG+L S +F
Sbjct: 332 PTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDR 391
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI-WRNLLDACANLGALKL 364
K I +++SG+ +G EA+ +F +M E+ + L AC+ G ++
Sbjct: 392 FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEE 451
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMI 423
G ++ + P+ + +++M R G + A + D M V+ D W S++
Sbjct: 452 GLKIYESMESVFGVKPITAHY---ACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLL 508
Query: 424 EGFGSH 429
+H
Sbjct: 509 GACRTH 514
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 20/173 (11%)
Query: 350 RNLLDACANLGALKLGRVVHGYLM-------KNLFNGPVEGNLHMETSILNMYIRGGNIS 402
R L D+C + +V GY + LF+ + N+ +++ Y++ G I
Sbjct: 37 RKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEID 96
Query: 403 SARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
AR VFD MP ++V++WT++++G+ +G A F M E N V++ +L
Sbjct: 97 EARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFL 152
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDH--HTCMVDLFGRCGMVKEALSIILKM 513
G + + CK+Y + P D+ T M+ + G V EA I +M
Sbjct: 153 QDGRIDDACKLYEMI-------PDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 102/219 (46%), Gaps = 21/219 (9%)
Query: 291 AKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR 350
++ GK+ + +LF KS + +M++G+ N +A LF +M +++ W
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNII----SWN 83
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
L+ G +K G + + +F+ E N+ T+++ Y+ G + A ++F +
Sbjct: 84 GLVS-----GYMKNGEIDEA---RKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
MP K+ ++WT M+ GF G +A K + ++ + +++ S++ G V E
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDK----DNIARTSMIHGLCKEGRVDEA 191
Query: 471 CKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSI 509
+I+ M E ++ T MV +G+ V +A I
Sbjct: 192 REIFDEMS-----ERSVITWTTMVTGYGQNNRVDDARKI 225
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 107/235 (45%), Gaps = 34/235 (14%)
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV-----IVPEIWRNLLDA 355
+LF E+ ++ I+ ++SG+++NG EA +F M ++V + + +D
Sbjct: 69 KLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDV 128
Query: 356 CANL-----------------GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRG 398
+L G L+ GR+ + + P + N+ TS+++ +
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMI--PDKDNI-ARTSMIHGLCKE 185
Query: 399 GNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLL 458
G + AR +FD M + VI WT+M+ G+G + +A K F++M E V++ S+L
Sbjct: 186 GRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSML 241
Query: 459 SACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+G + + +++ M ++P + + M+ G+ G + +A + M
Sbjct: 242 MGYVQNGRIEDAEELFEVMP----VKPVIACNA-MISGLGQKGEIAKARRVFDSM 291
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 357 ANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
AN+ L R+ + + LF+ ++ S++ Y AR +FD MP +++
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
I+W ++ G+ +G EA K F+LM E N V++ +L+ H+G V +++
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWK 135
Query: 477 M 477
M
Sbjct: 136 M 136
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 182/632 (28%), Positives = 324/632 (51%), Gaps = 24/632 (3%)
Query: 5 PNNTM-AWNLTIRTHVDLGQFHSALSTFKKM---RQMGVP-HDTFT--FPVVNRALSSMR 57
P+ T+ W + + + F A F++M +P H TFT P N A+
Sbjct: 106 PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNA 165
Query: 58 ADAVYGKMTHCVAIQMGLDLD--LYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTS 115
V H A+++G D + L N ++ Y + + A +F+ + +D V++ +
Sbjct: 166 VGQV-----HAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNT 220
Query: 116 MIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG 174
+I GY + + + LF KMR +P+ T +L+A +G Q+H +V +G
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTG 280
Query: 175 VLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLIN 234
D SV N +L Y+ E +LF E+ + D S+N++IS YS
Sbjct: 281 FSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFR 340
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ--TSLLDFYAK 292
EMQ + N T+ +S A +L G +HC + +D +L SL+D YAK
Sbjct: 341 EMQCMGFDRRNFPFATM-LSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAK 398
Query: 293 CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL 352
C + + +F+ + ++ ++ A++SG++Q G + LF +M+ +L + +
Sbjct: 399 CEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATV 458
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP 412
L A A+ +L LG+ +H +++++ G +E N+ + +++MY + G+I A VF+ MP
Sbjct: 459 LKASASFASLLLGKQLHAFIIRS---GNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMP 514
Query: 413 VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCK 472
++ ++W ++I +G G A+ F M+E +QP+SV+ L +L+ACSH G V +G +
Sbjct: 515 DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE 574
Query: 473 IYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVY 532
+ +M +GI P H+ CM+DL GR G EA ++ +M PD +W ++L A ++
Sbjct: 575 YFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIH 634
Query: 533 GNKTLGEYTAQRLLELEP-DNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
N++L E A++L +E +A + +SN+ A+AG W +V ++++ M E+ +KK P +S
Sbjct: 635 KNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYS 694
Query: 592 CIEVKGVSYGFLSGDITHPEAEEIYAALCTLS 623
+EV + F S D THP +EI + L+
Sbjct: 695 WVEVNHKIHVFSSNDQTHPNGDEIVRKINELT 726
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 236/505 (46%), Gaps = 28/505 (5%)
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
A VY +M H + NTMI +VK + AR +FD M R VV+WT ++
Sbjct: 67 ARKVYDEMPHKNTVST---------NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILM 117
Query: 118 AGYISERHVSVACDLFNKMRVELE---PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG 174
Y H A LF +M P+ VT +L C + P N Q+H +AVK G
Sbjct: 118 GWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLG 177
Query: 175 VLMD--WSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGL 232
+ +V N +L+ Y + + +LF EI ++D ++N LI+ Y G L
Sbjct: 178 FDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHL 237
Query: 233 INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYA 291
+M+ GH + T + V+ A + + G+ +H L + TGFS D + +LDFY+
Sbjct: 238 FLKMRQ-SGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYS 296
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
K ++ + LF E+ +++ ++S + Q + ++ F++MQ +
Sbjct: 297 KHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFAT 356
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
+L ANL +L++GR +H + + LH+ S+++MY + A +F +
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALL----ATADSILHVGNSLVDMYAKCEMFEEAELIFKSL 412
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
P + ++WT++I G+ G LK F M ++ + TF ++L A + + G
Sbjct: 413 PQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI--WGALLAAS 529
+++ + +E + +VD++ +CG +K+A+ + +M PD W AL++A
Sbjct: 473 QLHAFIIRSGNLENVFS-GSGLVDMYAKCGSIKDAVQVFEEM---PDRNAVSWNALISAH 528
Query: 530 GVYGNKTLGEYTAQRLLE--LEPDN 552
G+ +++E L+PD+
Sbjct: 529 ADNGDGEAAIGAFAKMIESGLQPDS 553
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 289 bits (739), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 173/602 (28%), Positives = 319/602 (52%), Gaps = 13/602 (2%)
Query: 23 QFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLD-LDLYF 81
+ + A ++M + GV ++++ + A +R+ + +G++ H ++MG++ +
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLS-HGRLLH-DRMRMGIENPSVLL 120
Query: 82 CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELE 141
N ++ Y +C + A ++FD M + VS T+MI+ Y + + A LF+ M +
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180
Query: 142 -PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
P S +L++ L+ G QIH + +++G+ + S++ ++ MY G +
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 201 LFSEIN-KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKC 259
+F ++ K+ VA +++ Y+ G L ++ + EG W+ ++V+ A A
Sbjct: 241 VFDQMAVKKPVACTGLMVG-YTQAGRARDALKLFVDLVT-EGVEWDSFVFSVVLKACASL 298
Query: 260 GNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
L+ G+ +H V K G +V + T L+DFY KC + + + F+EI + ++ A++
Sbjct: 299 EELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAII 358
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEI-WRNLLDACANLGALKLGRVVHGYLMKNLF 377
SG+ Q F EA+ F+ +++++ I+ + ++ AC+ L +G VH +K
Sbjct: 359 SGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK 437
G G E++++ MY + G + A VF+ M D++AWT+ I G +G EAL+
Sbjct: 419 IGSQYG----ESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALR 474
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLF 497
F M+ M+PNSVTF+++L+ACSH+GLV +G +M + + P +DH+ CM+D++
Sbjct: 475 LFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIY 534
Query: 498 GRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHT 557
R G++ EAL + M PD+ W L+ + N LGE + L +L+P++ +
Sbjct: 535 ARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYV 594
Query: 558 LLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYA 617
L N+ AG+W E E+ + M+E+ LKK+ S I+ KG + F+ GD HP+ +EIY
Sbjct: 595 LPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYE 654
Query: 618 AL 619
L
Sbjct: 655 KL 656
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 10/298 (3%)
Query: 18 HVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDL 77
+ G+ AL F + GV D+F F VV +A +S+ + GK H ++GL+
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE-ELNLGKQIHACVAKLGLES 318
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
++ ++DFY+KC A R F + + VSW+++I+GY A F +R
Sbjct: 319 EVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLR 378
Query: 138 VELEP--NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGST 195
+ NS T + QAC N+G Q+H A+K ++ +++++ MY+ G
Sbjct: 379 SKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCL 438
Query: 196 EEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISA 255
++ +F ++ D+ +W IS ++ G+ L +M S G N T V++A
Sbjct: 439 DDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSC-GMKPNSVTFIAVLTA 497
Query: 256 FAKCGNLSKGEGVHCL---VIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFK 309
+ G + +G+ HCL + K + + ++D YA+ G LD +++ + + F+
Sbjct: 498 CSHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFE 553
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 14/223 (6%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVP-HDTFTFPVVNRALSSMRADAVY 62
EPN+ ++W+ I + + QF A+ TFK +R ++FT+ + +A S + AD
Sbjct: 348 EPND-VSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVL-ADCNI 405
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G H AI+ L Y + +I Y KC C+ A VF+ M + D+V+WT+ I+G+
Sbjct: 406 GGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAY 465
Query: 123 ERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVG-----TQIHGYAVKSGVL 176
+ S A LF KM ++PNSVT I +L AC + + G T + Y V +
Sbjct: 466 YGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTI- 524
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEIN-KRDVASWNILIS 218
+ ++ +YA G +E + + D SW +S
Sbjct: 525 ---DHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLS 564
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 288 bits (737), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 292/550 (53%), Gaps = 23/550 (4%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
+++ N ++ Y K I AR++FD + D VS+ ++I+GY R A LF +MR
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 138 -VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTE 196
+ E + TL ++ ACC +++ Q+H ++V G SV N+ + Y+ G
Sbjct: 133 KLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLR 190
Query: 197 EVELLFSEINK-RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISA 255
E +F +++ RD SWN +I Y + + L EM +G ++ TL V++A
Sbjct: 191 EAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEM-IFKGFKIDMFTLASVLNA 249
Query: 256 FAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLD---ISVQLFREIHFKSY 311
+L G H +IK GF + + + L+DFY+KCG D S ++F+EI
Sbjct: 250 LTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDL 309
Query: 312 ITLGAMMSGFIQNGSFME-AIALFQQMQ-----AEDLVIVPEIWRNLLDACANLGALKLG 365
+ M+SG+ N E A+ F+QMQ +D V + AC+NL +
Sbjct: 310 VVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVC-----VTSACSNLSSPSQC 364
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
+ +HG +K+ + + +++++Y + GN+ AR VFDRMP + +++ MI+G
Sbjct: 365 KQIHGLAIKSHIPS---NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421
Query: 426 FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEP 485
+ HG G EAL + M++ + PN +TF+++LSAC+H G V EG + + +MK F IEP
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481
Query: 486 ALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRL 545
+H++CM+DL GR G ++EA I M P S W ALL A + N L E A L
Sbjct: 482 EAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANEL 541
Query: 546 LELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSG 605
+ ++P A + +L+N+ A A +W E+ +R+ M K ++KKPG S IEVK + F++
Sbjct: 542 MVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAE 601
Query: 606 DITHPEAEEI 615
D +HP E+
Sbjct: 602 DWSHPMIREV 611
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 124/468 (26%), Positives = 214/468 (45%), Gaps = 19/468 (4%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P +T+++N I + D + +A+ FK+MR++G D FT + A R D
Sbjct: 98 DEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD-RVDL 156
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLH-RDVVSWTSMIAG 119
+ K HC ++ G D N + +Y K + A VF M RD VSW SMI
Sbjct: 157 I--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVA 214
Query: 120 YISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
Y + + A L+ +M + + + TL +L A + L G Q HG +K+G +
Sbjct: 215 YGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQN 274
Query: 179 WSVKNSVLRMYADKGSTE---EVELLFSEINKRDVASWNILISFYSMVGDMMRVA-GLIN 234
V + ++ Y+ G + + E +F EI D+ WN +IS YSM ++ A
Sbjct: 275 SHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFR 334
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVL--QTSLLDFYAK 292
+MQ + GH + + V SA + + S+ + +H L IK+ + + +L+ Y K
Sbjct: 335 QMQRI-GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYK 393
Query: 293 CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL 352
G L + +F + + ++ M+ G+ Q+G EA+ L+Q+M + + +
Sbjct: 394 SGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAV 453
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP 412
L ACA+ G + G+ MK F +E + ++++ R G + A D MP
Sbjct: 454 LSACAHCGKVDEGQEYFN-TMKETFK--IEPEAEHYSCMIDLLGRAGKLEEAERFIDAMP 510
Query: 413 VKD-VIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
K +AW +++ H A + N +M MQP + T +L+
Sbjct: 511 YKPGSVAWAALLGACRKHKNMALAERAANELMV--MQPLAATPYVMLA 556
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 143/347 (41%), Gaps = 39/347 (11%)
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQL 302
W +T ++ +L G+ +H L +K+ S L ++ Y+KCG+L +
Sbjct: 6 WKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAA 65
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
F + + ++ + ++ A LF ++ D V + DA A+
Sbjct: 66 FYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAM 125
Query: 363 -------KLGRVVHGY--------------LMKNLFNGPVEGNLHMETSILNMYI----R 397
KLG V G+ L+K L V G +S+ N ++ +
Sbjct: 126 VLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSK 185
Query: 398 GGNISSARAVFDRM-PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLS 456
GG + A +VF M ++D ++W SMI +G H G +AL + M+ + + T S
Sbjct: 186 GGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLAS 245
Query: 457 LLSACSHSGLVSEGCKIYYSM-KWGFGIEPALDHHTCMVDLFGRCGMVKEALS--IILKM 513
+L+A + + G + + + K GF + + ++D + +CG + +
Sbjct: 246 VLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVG--SGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 514 VILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELE-----PDNAGY 555
++ PD +W ++ SG N+ L E + +++ PD+ +
Sbjct: 304 ILSPDLVVWNTMI--SGYSMNEELSEEAVKSFRQMQRIGHRPDDCSF 348
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/552 (31%), Positives = 288/552 (52%), Gaps = 12/552 (2%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEP 142
N+++ Y KC + A ++FD M RDV+S + G++ R L +M
Sbjct: 94 NSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGF 153
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
+ TL ++L C V IH A+ SG + SV N ++ Y G + +F
Sbjct: 154 DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213
Query: 203 SEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG-- 260
++ R+V + +IS ++ + + GL + SL +SA A C
Sbjct: 214 DGMSHRNVITLTAVIS--GLIENELHEDGL--RLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 261 -NLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
+ +G+ +H L+ K G ++ ++++L+D Y+KCG ++ + +F +++ ++
Sbjct: 270 QRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVIL 329
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFN 378
G QNGS EAI F +M + I + +L +L LG+ +H ++K F+
Sbjct: 330 VGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFS 389
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKY 438
G N + ++NMY + G+++ ++ VF RMP ++ ++W SMI F HG G ALK
Sbjct: 390 G----NTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKL 445
Query: 439 FNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFG 498
+ M ++P VTFLSLL ACSH GL+ +G ++ MK GIEP +H+TC++D+ G
Sbjct: 446 YEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLG 505
Query: 499 RCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTL 558
R G++KEA S I + + PD +IW ALL A +G+ +GEY A++L + PD++ H L
Sbjct: 506 RAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHIL 565
Query: 559 LSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAA 618
++N+ +S G+W E + + M + K+ G S IE++ ++ F+ D HP+AE IY
Sbjct: 566 IANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYDV 625
Query: 619 LCTLSRVTQDFG 630
L L V D G
Sbjct: 626 LSGLFPVMVDEG 637
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 188/371 (50%), Gaps = 9/371 (2%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
KM H +AI G D ++ N +I Y KC C R VFD M HR+V++ T++I+G I
Sbjct: 175 KMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIEN 234
Query: 124 RHVSVACDLFNKMRVEL-EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
LF+ MR L PNSVT + L AC S + G QIH K G+ + ++
Sbjct: 235 ELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIE 294
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG-DMMRVAGLINEMQSLEG 241
++++ MY+ GS E+ +F + D S +++ + G + + I +Q+
Sbjct: 295 SALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVE 354
Query: 242 HSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISV 300
N+ + L +S +L G+ +H LVIK FS + + L++ Y+KCG L S
Sbjct: 355 IDANVVSAVLGVSFIDN--SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
+FR + ++Y++ +M++ F ++G + A+ L+++M ++ + +LL AC+++G
Sbjct: 413 TVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVG 472
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAW 419
+ GR + MK + +E T I++M R G + A++ D +P+K D W
Sbjct: 473 LIDKGRELLNE-MKEVHG--IEPRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIW 529
Query: 420 TSMIEGFGSHG 430
+++ HG
Sbjct: 530 QALLGACSFHG 540
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 121/236 (51%), Gaps = 20/236 (8%)
Query: 281 VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAE 340
V+ SLL YAKCGKL +++LF E+ + I+ + GF++N L ++M
Sbjct: 91 VVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGS 150
Query: 341 ------DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVE-GNLHMETSILN 393
L IV L C + +++H + + ++ + GN ++
Sbjct: 151 GGFDHATLTIV-------LSVCDTPEFCLVTKMIHALAILSGYDKEISVGN-----KLIT 198
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
Y + G S R VFD M ++VI T++I G + + L+ F+LM + PNSVT
Sbjct: 199 SYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVT 258
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSI 509
+LS L+ACS S + EG +I +++ W +GIE L + ++D++ +CG +++A +I
Sbjct: 259 YLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDAWTI 313
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 195/407 (47%), Gaps = 18/407 (4%)
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V NS+L +YA G + LF E+ RDV S NI+ FY + + +G + + L
Sbjct: 92 VWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIV--FYGFLRNRETESGFVLLKRMLG 149
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDIS 299
++ TLT+V+S + +H L I +G+ ++ + L+ Y KCG
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+F + ++ ITL A++SG I+N + + LF M+ + + + L AC+
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGS 269
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
+ G+ +H L K +E L +E+++++MY + G+I A +F+ D ++
Sbjct: 270 QRIVEGQQIHALLWKY----GIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSM 325
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMK 478
T ++ G +G EA+++F M++ ++ ++ ++L + G +++ +K
Sbjct: 326 TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK 385
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI--WGALLAASGVYGN-- 534
F +++ +++++ +CG + ++ ++ +M P W +++AA +G+
Sbjct: 386 RKFSGNTFVNNG--LINMYSKCGDLTDSQTVFRRM---PKRNYVSWNSMIAAFARHGHGL 440
Query: 535 KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSE 581
L Y LE++P + + +LL + + G ++ EL EM E
Sbjct: 441 AALKLYEEMTTLEVKPTDVTFLSLL-HACSHVGLIDKGRELLNEMKE 486
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 170/438 (38%), Gaps = 53/438 (12%)
Query: 27 ALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMI 86
L F MR+ G+ H + A S V G+ H + + G++ +L + ++
Sbjct: 240 GLRLFSLMRR-GLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALM 298
Query: 87 DFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR---VELEPN 143
D Y KC I A +F+ D VS T ++ G A F +M VE++ N
Sbjct: 299 DMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDAN 358
Query: 144 SVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFS 203
V+ + L L +G Q+H +K + V N ++ MY+ G + + +F
Sbjct: 359 VVSAV--LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFR 416
Query: 204 EINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLS 263
+ KR+ SWN +I+ ++ G + L EM +LE ++ L+L + A + G +
Sbjct: 417 RMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSL-LHACSHVGLID 475
Query: 264 KGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQ 323
KG LL+ + ++ R H+ I + +
Sbjct: 476 KGR------------------ELLNEMKEVHGIEP-----RTEHYTCIIDMLGRAGLLKE 512
Query: 324 NGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFN-GPVE 382
SF++++ L + IW+ LL AC+ G ++G Y + LF P
Sbjct: 513 AKSFIDSLPLKPDCK---------IWQALLGACSFHGDTEVGE----YAAEQLFQTAPDS 559
Query: 383 GNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
+ H+ I N+Y G RM V T + H K + +
Sbjct: 560 SSAHI--LIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEH-------KTHSFV 610
Query: 443 MEHRMQPNSVTFLSLLSA 460
+E ++ P + +LS
Sbjct: 611 VEDKLHPQAEAIYDVLSG 628
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 16/213 (7%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYF 81
G A+ F +M Q GV D V +S + GK H + I+ + +
Sbjct: 336 GSEEEAIQFFIRMLQAGVEIDANVVSAV-LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFV 394
Query: 82 CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVEL 140
N +I+ Y KC + ++ VF M R+ VSW SMIA + H A L+ +M +E+
Sbjct: 395 NNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEV 454
Query: 141 EPNSVTLIVMLQACC-------ASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKG 193
+P VT + +L AC LN ++HG ++ ++ M G
Sbjct: 455 KPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRT------EHYTCIIDMLGRAG 508
Query: 194 STEEVELLFSEIN-KRDVASWNILISFYSMVGD 225
+E + + K D W L+ S GD
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGD 541
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 332/625 (53%), Gaps = 35/625 (5%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY--GK 64
+ ++WN TI + D Q AL+ +M+ GV D FT+ ALS + G
Sbjct: 141 DVVSWN-TILSGFDDNQI--ALNFVVRMKSAGVVFDAFTYST---ALSFCVGSEGFLLGL 194
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
++ GL+ DL N+ I Y + ARRVFD M +D++SW S+++G E
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG 254
Query: 125 HVSV-ACDLF-NKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
A +F + MR +E + V+ ++ CC T L + QIHG +K G V
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
N ++ Y+ G E V+ +F ++++R+V SW +IS S D + + +N +G
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--SNKDDAVSI--FLN--MRFDGV 368
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQ 301
N T +I+A + +G +H L IKTGF S+ + S + YAK L+ + +
Sbjct: 369 YPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKK 428
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR--NLLDACANL 359
F +I F+ I+ AM+SGF QNG EA+ +F AE + P + ++L+A A
Sbjct: 429 AFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM---PNEYTFGSVLNAIAFA 485
Query: 360 G--ALKLGRVVHGYLMKNLFNG-PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
++K G+ H +L+K N PV + +++L+MY + GNI + VF+ M K+
Sbjct: 486 EDISVKQGQRCHAHLLKLGLNSCPV-----VSSALLDMYAKRGNIDESEKVFNEMSQKNQ 540
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
WTS+I + SHG + F+ M++ + P+ VTFLS+L+AC+ G+V +G +I+
Sbjct: 541 FVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNM 600
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
M + +EP+ +H++CMVD+ GR G +KEA ++ ++ P + ++L + ++GN
Sbjct: 601 MIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVK 660
Query: 537 LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVK 596
+G A+ +E++P+ +G + + N+ A W++ E+R+ M +K++ K+ G+S I+V
Sbjct: 661 MGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVG 720
Query: 597 GVS-----YGFLSGDITHPEAEEIY 616
GF SGD +HP+++EIY
Sbjct: 721 DTEGSLTMQGFSSGDKSHPKSDEIY 745
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 132/538 (24%), Positives = 250/538 (46%), Gaps = 25/538 (4%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
+ N T + N +I + ALS FK+ Q+G + AL + R D G
Sbjct: 36 QRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDLKRG 95
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
H + G + N ++ Y K A +F+ ++ DVVSW ++++G+
Sbjct: 96 CQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN 155
Query: 124 RHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
+ +A + +M+ + ++ T L C S +G Q+ VK+G+ D V
Sbjct: 156 Q---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVG 212
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
NS + MY+ GS +F E++ +D+ SWN L+S S G A +I EG
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGV 272
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTS--LLDFYAKCGKLDISV 300
+ + T VI+ +L +H L IK G+ + +L+ L+ Y+KCG L+
Sbjct: 273 ELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY-ESLLEVGNILMSRYSKCGVLEAVK 331
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
+F ++ ++ ++ M+S +A+++F M+ + + + L++A
Sbjct: 332 SVFHQMSERNVVSWTTMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 386
Query: 361 ALKLGRVVHGYLMKNLF-NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
+K G +HG +K F + P GN S + +Y + + A+ F+ + +++I+W
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGN-----SFITLYAKFEALEDAKKAFEDITFREIISW 441
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS--EGCKIY-YS 476
+MI GF +GF EALK F L PN TF S+L+A + + +S +G + + +
Sbjct: 442 NAMISGFAQNGFSHEALKMF-LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN 534
+K G P + + ++D++ + G + E+ + +M + +W ++++A +G+
Sbjct: 501 LKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGD 555
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 187/642 (29%), Positives = 313/642 (48%), Gaps = 87/642 (13%)
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H ++ G D Y +I Y C A V + + S++S+I +
Sbjct: 37 AHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKL 96
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
+ + +F++M L P+S L + + C + VG QIH + SG+ MD V+ S
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGS 156
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
+ MY G + +F ++ +DV + + L+ Y+ G + V +++EM+S G
Sbjct: 157 MFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES-SGIEA 215
Query: 245 NIETLTLVISAFAKCGN-----------------------------------LSKGEGVH 269
NI + ++S F + G L+ G +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 270 CLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHF------KSYIT--------- 313
VIK G D + ++++D Y K G + + LF + +YIT
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 314 --------------------LGAMMSGFIQNGSFMEAIALFQQMQAEDL----VIVPEIW 349
++++G QNG +EA+ LF++MQ + V +P
Sbjct: 336 KALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP--- 392
Query: 350 RNLLDACANLGALKLGRVVHGYLMK-NLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
++L AC N+ AL GR HG+ ++ +L + N+H+ +++++MY + G I+ ++ VF
Sbjct: 393 -SMLPACGNIAALGHGRSTHGFAVRVHLLD-----NVHVGSALIDMYAKCGRINLSQIVF 446
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
+ MP K+++ W S++ GF HG E + F +M R++P+ ++F SLLSAC GL
Sbjct: 447 NMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTD 506
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
EG K + M +GI+P L+H++CMV+L GR G ++EA +I +M PDS +WGALL +
Sbjct: 507 EGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
Query: 529 SGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKP 588
+ N L E A++L LEP+N G + LLSN+ A+ G W EV+ +R +M LKK P
Sbjct: 567 CRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNP 626
Query: 589 GWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
G S I+VK Y L+GD +HP+ ++I + +S+ + G
Sbjct: 627 GCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSG 668
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 198/477 (41%), Gaps = 94/477 (19%)
Query: 164 TQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMV 223
TQ H +KSG D + ++ Y++ + +L+ I + S++ LI +
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKA 94
Query: 224 GDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSK---GEGVHCLVIKTGFS-D 279
+ G+ + M S H I ++ + F C LS G+ +HC+ +G D
Sbjct: 95 KLFTQSIGVFSRMFS---HGL-IPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 280 DVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAM---------------------- 317
+Q S+ Y +CG++ + ++F + K +T A+
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 318 -------------MSGFIQNGSFMEAIALFQQMQ----AEDLVIVPEIWRNLLDACANLG 360
+SGF ++G EA+ +FQ++ D V V + ++ D+
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDS----E 266
Query: 361 ALKLGRVVHGYLMKNLF----------------NGPVEGNLH-------METSILNMYI- 396
L +GR++HGY++K +G V G + ME + N YI
Sbjct: 267 MLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYIT 326
Query: 397 ---RGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQP 449
R G + A +F+ + +V++WTS+I G +G EAL+ F M ++P
Sbjct: 327 GLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKP 386
Query: 450 NSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH----TCMVDLFGRCGMVKE 505
N VT S+L AC + + G + GF + L + + ++D++ +CG +
Sbjct: 387 NHVTIPSMLPACGNIAALGHGRSTH-----GFAVRVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 506 ALSIILKMVILPDSRIWGALLAASGVYG--NKTLGEYTAQRLLELEPDNAGYHTLLS 560
+ I+ M+ + W +L+ ++G + + + + L+PD + +LLS
Sbjct: 442 S-QIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 156/364 (42%), Gaps = 53/364 (14%)
Query: 264 KGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFI 322
K H ++K+G +D + L+ Y+ + + + + I + + +++
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 323 QNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVE 382
+ F ++I +F +M + L+ + NL CA L A K+G+ +H + +G ++
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCV---SCVSG-LD 148
Query: 383 GNLHMETSILNMYIRGGNISSARAVFDRMPVKDV-------------------------- 416
+ ++ S+ +MY+R G + AR VFDRM KDV
Sbjct: 149 MDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEM 208
Query: 417 ---------IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
++W ++ GF G+ EA+ F + P+ VT S+L + S ++
Sbjct: 209 ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEML 268
Query: 468 SEGCKIYYSMKWGFGIEPALDHHTC----MVDLFGRCGMVKEALSIILKMVILPDSRIWG 523
+ G I+ G+ I+ L C M+D++G+ G V +S+ + ++ ++ +
Sbjct: 269 NMGRLIH-----GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMM-EAGVCN 322
Query: 524 ALLAASGVYG--NKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSE 581
A + G +K L + + +E + + ++++ A G+ E EL REM
Sbjct: 323 AYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGC-AQNGKDIEALELFREMQV 381
Query: 582 KDLK 585
+K
Sbjct: 382 AGVK 385
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++W I G+ AL F++M+ GV + T P + A ++ A +G+ T
Sbjct: 352 NVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALG-HGRST 410
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H A+++ L +++ + +ID Y KC I ++ VF++M +++V W S++ G+
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 127 SVACDLFNK-MRVELEPNSVTLIVMLQAC 154
+F MR L+P+ ++ +L AC
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSAC 499
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/499 (31%), Positives = 283/499 (56%), Gaps = 12/499 (2%)
Query: 139 ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEV 198
E P+ T +++ C + L+ ++H + + +G D + ++ MY+D GS +
Sbjct: 72 ESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYA 131
Query: 199 ELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISA--F 256
+F + KR + WN L ++ G V GL +M + G + T T V+ A
Sbjct: 132 RKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRI-GVESDRFTYTYVLKACVA 190
Query: 257 AKC--GNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYIT 313
++C +L KG+ +H + + G+S V + T+L+D YA+ G +D + +F + ++ ++
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 314 LGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHGY 371
AM++ + +NG EA+ F++M E P ++L ACA+L AL+ G+++HGY
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 372 LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGF 431
+++ ++ L + ++++ MY R G + + VFDRM +DV++W S+I +G HG+
Sbjct: 311 ILRR----GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGY 366
Query: 432 GFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHT 491
G +A++ F M+ + P VTF+S+L ACSH GLV EG +++ +M GI+P ++H+
Sbjct: 367 GKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYA 426
Query: 492 CMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPD 551
CMVDL GR + EA ++ M P ++WG+LL + ++GN L E ++RL LEP
Sbjct: 427 CMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPK 486
Query: 552 NAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPE 611
NAG + LL+++ A A W+EV+ +++ + + L+K PG +EV+ Y F+S D +P
Sbjct: 487 NAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPL 546
Query: 612 AEEIYAALCTLSRVTQDFG 630
E+I+A L L+ ++ G
Sbjct: 547 MEQIHAFLVKLAEDMKEKG 565
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 189/451 (41%), Gaps = 63/451 (13%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY---GKMTH 67
WN R G L + KM ++GV D FT+ V +A + + GK H
Sbjct: 146 WNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIH 205
Query: 68 CVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVS 127
+ G +Y T++D Y + C+ A VF M R+VVSW++MIA Y
Sbjct: 206 AHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAF 265
Query: 128 VACDLFNKMRVELE---PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A F +M E + PNSVT++ +LQAC + L G IHGY ++ G+ V ++
Sbjct: 266 EALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISA 325
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
++ MY G E + +F ++ RDV SWN LIS Y + G + + EM + G S
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLA-NGASP 384
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTS------LLDFYAKCGKLDI 298
T V+ A + G + +G+ + +T + D ++ ++D + +LD
Sbjct: 385 TPVTFVSVLGACSHEGLVEEGK----RLFETMWRDHGIKPQIEHYACMVDLLGRANRLD- 439
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
EA + Q M+ E P++W +LL +C
Sbjct: 440 ------------------------------EAAKMVQDMRTEP---GPKVWGSLLGSCRI 466
Query: 359 LGALKLG----RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
G ++L R + KN N + +++ E + + R + R + ++P +
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGL-QKLPGR 525
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEH 445
W + + F ++ FN +ME
Sbjct: 526 ---CWMEVRRKM----YSFVSVDEFNPLMEQ 549
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 144/301 (47%), Gaps = 9/301 (2%)
Query: 74 GLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLF 133
G D D + +I Y + AR+VFD R + W ++ H L+
Sbjct: 107 GSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLY 166
Query: 134 NKM-RVELEPNSVTLIVMLQACCAS----TPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
KM R+ +E + T +L+AC AS L G +IH + + G + +++ M
Sbjct: 167 WKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDM 226
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINE-MQSLEGHSWNIE 247
YA G + +F + R+V SW+ +I+ Y+ G E M+ + S N
Sbjct: 227 YARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSV 286
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ--TSLLDFYAKCGKLDISVQLFRE 305
T+ V+ A A L +G+ +H +++ G D +L ++L+ Y +CGKL++ ++F
Sbjct: 287 TMVSVLQACASLAALEQGKLIHGYILRRGL-DSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
+H + ++ +++S + +G +AI +F++M A P + ++L AC++ G ++ G
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 366 R 366
+
Sbjct: 406 K 406
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 4/152 (2%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQ--MGVPHDTFTFPVVNRALSSMRADAVYG 63
N ++W+ I + G+ AL TF++M + ++ T V +A +S+ A G
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL-AALEQG 304
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K+ H ++ GLD L + ++ Y +C + +RVFD M RDVVSW S+I+ Y
Sbjct: 305 KLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVH 364
Query: 124 RHVSVACDLFNKMRVE-LEPNSVTLIVMLQAC 154
+ A +F +M P VT + +L AC
Sbjct: 365 GYGKKAIQIFEEMLANGASPTPVTFVSVLGAC 396
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/473 (34%), Positives = 260/473 (54%), Gaps = 17/473 (3%)
Query: 149 VMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR 208
+L+ C L G +H + ++S D + N++L MYA GS EE +F ++ +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 209 DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV 268
D +W LIS YS N+M G+S N TL+ VI A A G +
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRF-GYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 269 HCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSF 327
H +K GF +V + ++LLD Y + G +D + +F + ++ ++ A+++G +
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGT 243
Query: 328 MEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKN-----LFNGPVE 382
+A+ LFQ M + + +L AC++ G L+ G+ VH Y++K+ F G
Sbjct: 244 EKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAG--- 300
Query: 383 GNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
++L+MY + G+I AR +FDR+ +DV++W S++ + HGFG EA+ +F M
Sbjct: 301 ------NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGM 502
++PN ++FLS+L+ACSHSGL+ EG Y MK GI P H+ +VDL GR G
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGD 413
Query: 503 VKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNV 562
+ AL I +M I P + IW ALL A ++ N LG Y A+ + EL+PD+ G H +L N+
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 563 KASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEI 615
AS GRWN+ +R++M E +KK+P S +E++ + F++ D HP+ EEI
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEI 526
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 185/373 (49%), Gaps = 10/373 (2%)
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+ G++ H +Q D+ NT+++ Y KC + AR+VF+ M RD V+WT++I+GY
Sbjct: 77 IQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGY 136
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
A FN+M R PN TL +++A A G Q+HG+ VK G +
Sbjct: 137 SQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNV 196
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
V +++L +Y G ++ +L+F + R+ SWN LI+ ++ + L M
Sbjct: 197 HVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLR- 255
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDI 298
+G + + + A + G L +G+ VH +IK+G +LLD YAK G +
Sbjct: 256 DGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHD 315
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
+ ++F + + ++ ++++ + Q+G EA+ F++M+ + + ++L AC++
Sbjct: 316 ARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSH 375
Query: 359 LGALKLGRVVHGY-LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVI 417
G L G H Y LMK +G V H T ++++ R G+++ A + MP++
Sbjct: 376 SGLLDEG--WHYYELMKK--DGIVPEAWHYVT-VVDLLGRAGDLNRALRFIEEMPIEPTA 430
Query: 418 A-WTSMIEGFGSH 429
A W +++ H
Sbjct: 431 AIWKALLNACRMH 443
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 171/406 (42%), Gaps = 45/406 (11%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHC 68
+ W I + + AL F +M + G + FT V +A ++ R G H
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC-GHQLHG 185
Query: 69 VAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSV 128
++ G D +++ + ++D Y + + A+ VFD + R+ VSW ++IAG+
Sbjct: 186 FCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEK 245
Query: 129 ACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLR 187
A +LF M R P+ + + AC ++ L G +H Y +KSG + N++L
Sbjct: 246 ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLD 305
Query: 188 MYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
MYA GS + +F + KRDV SWN L++ Y+ G EM+ + I
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEIS 365
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREI 306
L+ V++A + G L +G + L+ K G + +++D + G L+
Sbjct: 366 FLS-VLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN--------- 415
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
A+ ++M E IW+ LL+AC +LG
Sbjct: 416 ----------------------RALRFIEEMPIEP---TAAIWKALLNACRMHKNTELG- 449
Query: 367 VVHGYLMKNLFN-GPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
Y +++F P + H+ + N+Y GG + A V +M
Sbjct: 450 ---AYAAEHVFELDPDDPGPHV--ILYNIYASGGRWNDAARVRKKM 490
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 14/185 (7%)
Query: 347 EIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARA 406
+ LL C L GR+VH ++++++F ++ M ++LNMY + G++ AR
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQSIF----RHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 407 VFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGL 466
VF++MP +D + WT++I G+ H +AL +FN M+ PN T S++ A +
Sbjct: 117 VFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERR 176
Query: 467 VSEGCKIYYSMKWGFGIEPALDHH----TCMVDLFGRCGMVKEALSIILKMVILPDSRIW 522
G +++ GF ++ D + + ++DL+ R G++ +A ++ + + W
Sbjct: 177 GCCGHQLH-----GFCVKCGFDSNVHVGSALLDLYTRYGLMDDA-QLVFDALESRNDVSW 230
Query: 523 GALLA 527
AL+A
Sbjct: 231 NALIA 235
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 170/496 (34%), Positives = 276/496 (55%), Gaps = 16/496 (3%)
Query: 133 FNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY--- 189
F++ V L P I +LQ S+ + QIH ++++ GV + + L Y
Sbjct: 4 FSETSVLLLPMVEKCINLLQTYGVSSITKL-RQIHAFSIRHGVSISDAELGKHLIFYLVS 62
Query: 190 -ADKGSTEEVELLFSEINKR-DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
+FS+I K +V WN LI Y+ +G+ + L EM+ +
Sbjct: 63 LPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTH 122
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREI 306
T +I A ++ GE +H +VI++GF + +Q SLL YA CG + + ++F ++
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR--NLLDACANLGALKL 364
K + ++++GF +NG EA+AL+ +M ++ I P+ + +LL ACA +GAL L
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKG--IKPDGFTIVSLLSACAKIGALTL 240
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
G+ VH Y++K + NLH +L++Y R G + A+ +FD M K+ ++WTS+I
Sbjct: 241 GKRVHVYMIKV----GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIV 296
Query: 425 GFGSHGFGFEALKYFNLMMEHR-MQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGI 483
G +GFG EA++ F M + P +TF+ +L ACSH G+V EG + + M+ + I
Sbjct: 297 GLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKI 356
Query: 484 EPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQ 543
EP ++H CMVDL R G VK+A I M + P+ IW LL A V+G+ L E+
Sbjct: 357 EPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARI 416
Query: 544 RLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFL 603
++L+LEP+++G + LLSN+ AS RW++V+++R++M +KK PG S +EV + FL
Sbjct: 417 QILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFL 476
Query: 604 SGDITHPEAEEIYAAL 619
GD +HP+++ IYA L
Sbjct: 477 MGDKSHPQSDAIYAKL 492
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 168/360 (46%), Gaps = 35/360 (9%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMG-VPHDTFTFPVVNRALSSMRADAV 61
E+P N WN IR + ++G SA S +++MR G V DT T+P + +A+++M AD
Sbjct: 80 EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM-ADVR 138
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
G+ H V I+ G +Y N+++ Y C + A +VFD M +D+V+W S+I G+
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
A L+ +M + ++P+ T++ +L AC L +G ++H Y +K G+ +
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
N +L +YA G EE + LF E+ ++ SW LI ++ G L M+S E
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISV 300
G T ++ A + CG ++K GF Y + + + +
Sbjct: 319 GLLPCEITFVGILYACSHCG-----------MVKEGFE-----------YFRRMREEYKI 356
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
+ E HF G M+ + G +A + M + V+ IWR LL AC G
Sbjct: 357 EPRIE-HF------GCMVDLLARAGQVKKAYEYIKSMPMQPNVV---IWRTLLGACTVHG 406
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 282 bits (721), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 165/471 (35%), Positives = 261/471 (55%), Gaps = 10/471 (2%)
Query: 165 QIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG 224
Q+H + + +G S+ ++ + + LLF + D +N +I S +
Sbjct: 27 QVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLR 86
Query: 225 DMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQ 283
+ M S N T T VI + A L G+GVHC + +GF D +Q
Sbjct: 87 LPLHCVAYYRRMLSSNVSPSNY-TFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQ 145
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
+L+ FY+KCG ++ + Q+F + KS + +++SGF QNG EAI +F QM+
Sbjct: 146 AALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFE 205
Query: 344 IVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
+ +LL ACA GA+ LG VH Y++ ++ N+ + T+++N+Y R G++
Sbjct: 206 PDSATFVSLLSACAQTGAVSLGSWVHQYIISE----GLDLNVKLGTALINLYSRCGDVGK 261
Query: 404 ARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ-PNSVTFLSLLSACS 462
AR VFD+M +V AWT+MI +G+HG+G +A++ FN M + PN+VTF+++LSAC+
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSR-- 520
H+GLV EG +Y M + + P ++HH CMVD+ GR G + EA I ++ +
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAP 381
Query: 521 -IWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREM 579
+W A+L A ++ N LG A+RL+ LEPDN G+H +LSN+ A +G+ +EV +R M
Sbjct: 382 ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGM 441
Query: 580 SEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
+L+K+ G+S IEV+ +Y F GD +H E EIY L TL ++ G
Sbjct: 442 MRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIG 492
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 150/335 (44%), Gaps = 41/335 (12%)
Query: 28 LSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMID 87
++ +++M V +TF V ++ + + A + GK HC A+ G LD Y ++
Sbjct: 92 VAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI-GKGVHCHAVVSGFGLDTYVQAALVT 150
Query: 88 FYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVT 146
FY KC + AR+VFD M + +V+W S+++G+ A +F +MR EP+S T
Sbjct: 151 FYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSAT 210
Query: 147 LIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEIN 206
+ +L AC + +++G+ +H Y + G+ ++ + +++ +Y+ G + +F ++
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 207 KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGE 266
+ +VA+W +IS Y G + L N+M+ G N T V+SA A G + +G
Sbjct: 271 ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGR 330
Query: 267 GVHCLVIKT-----GFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGF 321
V+ + K+ G V ++D + G LD
Sbjct: 331 SVYKRMTKSYRLIPGVEHHV---CMVDMLGRAGFLD------------------------ 363
Query: 322 IQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC 356
EA Q+ A P +W +L AC
Sbjct: 364 -------EAYKFIHQLDATGKATAPALWTAMLGAC 391
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 3/167 (1%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHC 68
+AWN + G A+ F +MR+ G D+ TF + A + A ++ G H
Sbjct: 174 VAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSL-GSWVHQ 232
Query: 69 VAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSV 128
I GLDL++ +I+ Y +C +G AR VFD M +V +WT+MI+ Y + +
Sbjct: 233 YIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQ 292
Query: 129 ACDLFNKMRVELE--PNSVTLIVMLQACCASTPLNVGTQIHGYAVKS 173
A +LFNKM + PN+VT + +L AC + + G ++ KS
Sbjct: 293 AVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKS 339
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 281 bits (720), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 175/586 (29%), Positives = 305/586 (52%), Gaps = 38/586 (6%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
+L+ N ++ Y K I F+ + RD V+W +I GY V A +N M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 138 VELEPN--SVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGST 195
+ N VTL+ ML+ ++ +++G QIHG +K G V + +L MYA+ G
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 196 EEVELLFSEINKRDVASWNILIS--------------FYSMVGDMMRVAGLIN------- 234
+ + +F ++ R+ +N L+ F M D + A +I
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGL 250
Query: 235 ---------EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQT 284
EM+ ++G + V+ A G +++G+ +H +I+T F D + + +
Sbjct: 251 AKEAIECFREMK-VQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 285 SLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVI 344
+L+D Y KC L + +F + K+ ++ AM+ G+ Q G EA+ +F MQ +
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 345 VPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSA 404
+ ACAN+ +L+ G HG K + +G + + + S++ +Y + G+I +
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHG---KAITSGLIH-YVTVSNSLVTLYGKCGDIDDS 425
Query: 405 RAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHS 464
+F+ M V+D ++WT+M+ + G E ++ F+ M++H ++P+ VT ++SACS +
Sbjct: 426 TRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRA 485
Query: 465 GLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGA 524
GLV +G + + M +GI P++ H++CM+DLF R G ++EA+ I M PD+ W
Sbjct: 486 GLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTT 545
Query: 525 LLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDL 584
LL+A GN +G++ A+ L+EL+P + +TLLS++ AS G+W+ V +LRR M EK++
Sbjct: 546 LLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
Query: 585 KKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
KK+PG S I+ KG + F + D + P ++IYA L L+ D G
Sbjct: 606 KKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNG 651
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 222/481 (46%), Gaps = 84/481 (17%)
Query: 166 IHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGD 225
IHG +++ + + N+++ YA S+ +F I + ++ SWN L+ YS G
Sbjct: 28 IHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGL 87
Query: 226 MMRVAGLINEMQSLEGHSWNI----ETLTLVISAFAKC---------------------- 259
+ + ++ +G +WN+ +L+ ++ A K
Sbjct: 88 ISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLK 147
Query: 260 -----GNLSKGEGVHCLVIKTGFS-----------------------------DD---VL 282
G++S G+ +H VIK GF DD V+
Sbjct: 148 LSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVM 207
Query: 283 QTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDL 342
SL+ CG ++ ++QLFR + K ++ AM+ G QNG EAI F++M+ + L
Sbjct: 208 YNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGL 266
Query: 343 VIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNIS 402
+ + ++L AC LGA+ G+ +H +++ F + ++++ +++++MY + +
Sbjct: 267 KMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNF----QDHIYVGSALIDMYCKCKCLH 322
Query: 403 SARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
A+ VFDRM K+V++WT+M+ G+G G EA+K F M + P+ T +SAC+
Sbjct: 323 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACA 382
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHH----TCMVDLFGRCGMVKEALSIILKMVILPD 518
+ + EG + + G I L H+ +V L+G+CG + ++ + +M + D
Sbjct: 383 NVSSLEEGSQFH-----GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR-D 436
Query: 519 SRIWGALLAASGVYGN--KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELR 576
+ W A+++A +G +T+ + L+PD L+ V ++ R VE+ +
Sbjct: 437 AVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDG----VTLTGVISACSRAGLVEKGQ 492
Query: 577 R 577
R
Sbjct: 493 R 493
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 169/363 (46%), Gaps = 39/363 (10%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
++++W I+ G A+ F++M+ G+ D + F V A + A GK
Sbjct: 234 DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGA-INEGKQI 292
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H I+ +Y + +ID Y KC C+ A+ VFD M ++VVSWT+M+ GY
Sbjct: 293 HACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRA 352
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
A +F M R ++P+ TL + AC + L G+Q HG A+ SG++ +V NS+
Sbjct: 353 EEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSL 412
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ +Y G ++ LF+E+N RD SW ++S Y+ G + L ++M G +
Sbjct: 413 VTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ-HGLKPD 471
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVI-KTGFSDDVLQTS-LLDFYAKCGKLDISVQLF 303
TLT VISA ++ G + KG+ L+ + G + S ++D +++ G+L+ +++
Sbjct: 472 GVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFI 531
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
+ F +AI W LL AC N G L+
Sbjct: 532 NGMPFPP------------------DAIG----------------WTTLLSACRNKGNLE 557
Query: 364 LGR 366
+G+
Sbjct: 558 IGK 560
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 193/463 (41%), Gaps = 38/463 (8%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
E+ P+ + + WN+ I + G +A+ + M + + T + LSS
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVF------------DLM--- 105
GK H I++G + L + ++ Y CI A++VF LM
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 106 ---------------LHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIV 149
+ +D VSW +MI G A + F +M+V+ L+ +
Sbjct: 216 LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
+L AC +N G QIH +++ V ++++ MY + +F + +++
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
V SW ++ Y G + +MQ G + TL ISA A +L +G H
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQR-SGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 270 CLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
I +G V + SL+ Y KCG +D S +LF E++ + ++ AM+S + Q G +
Sbjct: 395 GKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAV 454
Query: 329 EAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
E I LF +M L ++ AC+ G ++ G+ + P G+
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHY--- 511
Query: 389 TSILNMYIRGGNISSARAVFDRMPV-KDVIAWTSMIEGFGSHG 430
+ +++++ R G + A + MP D I WT+++ + G
Sbjct: 512 SCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 24/254 (9%)
Query: 345 VPEIWRNLLDACANLGALKLGRVVHGY-LMKN------LFNGPVEGNLHMETSILNMYIR 397
V I N++ A +VH Y LMK+ +F+ + NL ++L Y +
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84
Query: 398 GGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM-EHRMQPNSVTFLS 456
G IS + F+++P +D + W +IEG+ G A+K +N MM + VT ++
Sbjct: 85 AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT 144
Query: 457 LLSACSHSGLVSEGCKIYYS-MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIIL---- 511
+L S +G VS G +I+ +K GF E L + ++ ++ G + +A +
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGF--ESYLLVGSPLLYMYANVGCISDAKKVFYGLDD 202
Query: 512 KMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNE 571
+ ++ +S + G LLA + E Q +E D+ + ++ + A G E
Sbjct: 203 RNTVMYNS-LMGGLLACGMI-------EDALQLFRGMEKDSVSWAAMIKGL-AQNGLAKE 253
Query: 572 VEELRREMSEKDLK 585
E REM + LK
Sbjct: 254 AIECFREMKVQGLK 267
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/628 (29%), Positives = 327/628 (52%), Gaps = 11/628 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+T++W + I + V ++ AL + +M + GVP + FTF + A S + + +GK
Sbjct: 189 DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLE--FGKTI 246
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H I G+ L++ +++DFY + + A RV + +DV WTS+++G++
Sbjct: 247 HSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRA 306
Query: 127 SVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
A F +MR + L+PN+ T +L C A L+ G QIH +K G V N++
Sbjct: 307 KEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNAL 366
Query: 186 LRMYADKGSTE-EVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
+ MY ++E E +F + +V SW LI G + GL+ EM E
Sbjct: 367 VDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEP- 425
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLF 303
N+ TL+ V+ A +K ++ + +H +++ + V+ SL+D YA K+D + +
Sbjct: 426 NVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVI 485
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
R + + IT ++++ F + G A+++ M + + + + A ANLGAL+
Sbjct: 486 RSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALE 545
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
G+ +H Y +K+ F+G + S+++MY + G++ A+ VF+ + DV++W ++
Sbjct: 546 TGKHLHCYSVKSGFSGAAS----VLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLV 601
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGI 483
G S+GF AL F M +P+SVTFL LLSACS+ L G + + MK + I
Sbjct: 602 SGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNI 661
Query: 484 EPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQ 543
EP ++H+ +V + GR G ++EA ++ M + P++ I+ LL A GN +LGE A
Sbjct: 662 EPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMAN 721
Query: 544 RLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFL 603
+ L L P + + LL+++ +G+ ++ R M+EK L KK G S +EV+G + F+
Sbjct: 722 KGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFV 781
Query: 604 SGDITHPEAEE-IYAALCTLSRVTQDFG 630
S D+T + IYA + ++ + FG
Sbjct: 782 SEDVTRVDKTNGIYAEIESIKEEIKRFG 809
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 141/570 (24%), Positives = 263/570 (46%), Gaps = 20/570 (3%)
Query: 10 AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCV 69
AW + I +F SALS F++M G + FTF V R+ + +R D YG H
Sbjct: 91 AWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLR-DISYGGRVHGS 149
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA 129
I+ G + + +++ D Y KC A +F + + D +SWT MI+ + R A
Sbjct: 150 VIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREA 209
Query: 130 CDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
+++M + + PN T + +L A + L G IH + G+ ++ +K S++
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGA-SSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDF 268
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
Y+ E+ + + ++DV W ++S + G EM+SL G N T
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSL-GLQPNNFT 327
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISV-QLFREI 306
+ ++S + +L G+ +H IK GF D + +L+D Y KC ++ ++F +
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
+ ++ ++ G + +G + L +M ++ +L AC+ L ++
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF 426
+H YL++ V+G + + S+++ Y + A V M +D I +TS++ F
Sbjct: 448 EIHAYLLRR----HVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRF 503
Query: 427 GSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGF-GIE 484
G AL N M ++ + ++ +SA ++ G + G ++ YS+K GF G
Sbjct: 504 NELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAA 563
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLA--ASGVYGNKTLGEYTA 542
L+ +VD++ +CG +++A + + + PD W L++ AS + + L +
Sbjct: 564 SVLN---SLVDMYSKCGSLEDAKK-VFEEIATPDVVSWNGLVSGLASNGFISSALSAFEE 619
Query: 543 QRLLELEPDNAGYHTLLSNVKASAGRWNEV 572
R+ E EPD+ + LLS S GR ++
Sbjct: 620 MRMKETEPDSVTFLILLS--ACSNGRLTDL 647
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 204/405 (50%), Gaps = 13/405 (3%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G HC I+ GL +L CN ++ Y+K I AR++FD M HR V +WT MI+ +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 123 ERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
+ + A LF +M PN T ++++C ++ G ++HG +K+G + V
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVV 161
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMM-RVAGLINEMQSLE 240
+S+ +Y+ G +E LFS + D SW ++IS S+VG R A
Sbjct: 162 GSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS--SLVGARKWREALQFYSEMVKA 219
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDIS 299
G N T ++ A + G L G+ +H +I G + VL+TSL+DFY++ K++ +
Sbjct: 220 GVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDA 278
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
V++ + +++SGF++N EA+ F +M++ L + +L C+ +
Sbjct: 279 VRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAV 338
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR--GGNISSARAVFDRMPVKDVI 417
+L G+ +H +K F E + + ++++MY++ + ++R VF M +V+
Sbjct: 339 RSLDFGKQIHSQTIKVGF----EDSTDVGNALVDMYMKCSASEVEASR-VFGAMVSPNVV 393
Query: 418 AWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
+WT++I G HGF + M++ ++PN VT +L ACS
Sbjct: 394 SWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 178/373 (47%), Gaps = 8/373 (2%)
Query: 155 CASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWN 214
C S +G IH +K G+L + + N++L +Y LF E++ R V +W
Sbjct: 34 CESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWT 93
Query: 215 ILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIK 274
++IS ++ + L EM + H N T + V+ + A ++S G VH VIK
Sbjct: 94 VMISAFTKSQEFASALSLFEEMMASGTHP-NEFTFSSVVRSCAGLRDISYGGRVHGSVIK 152
Query: 275 TGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIAL 333
TGF + V+ +SL D Y+KCG+ + +LF + I+ M+S + + EA+
Sbjct: 153 TGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQF 212
Query: 334 FQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN 393
+ +M + + LL A + LG L+ G+ +H N+ + N+ ++TS+++
Sbjct: 213 YSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHS----NIIVRGIPLNVVLKTSLVD 267
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
Y + + A V + +DV WTS++ GF + EA+ F M +QPN+ T
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+ ++LS CS + G +I +S G E + D +VD++ +C + S +
Sbjct: 328 YSAILSLCSAVRSLDFGKQI-HSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGA 386
Query: 514 VILPDSRIWGALL 526
++ P+ W L+
Sbjct: 387 MVSPNVVSWTTLI 399
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 156/319 (48%), Gaps = 10/319 (3%)
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLF 303
N++ + I +F + + G +HC VIK G +++ L +LL Y K + + +LF
Sbjct: 22 NLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLF 81
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
E+ ++ M+S F ++ F A++LF++M A + +++ +CA L +
Sbjct: 82 DEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDIS 141
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
G VHG ++K F EGN + +S+ ++Y + G A +F + D I+WT MI
Sbjct: 142 YGGRVHGSVIKTGF----EGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGI 483
EAL++++ M++ + PN TF+ LL A S GL E K +S GI
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL--EFGKTIHSNIIVRGI 255
Query: 484 EPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA--SGVYGNKTLGEYT 541
+ T +VD + + +++A+ +L D +W ++++ + + +G +
Sbjct: 256 PLNVVLKTSLVDFYSQFSKMEDAVR-VLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFL 314
Query: 542 AQRLLELEPDNAGYHTLLS 560
R L L+P+N Y +LS
Sbjct: 315 EMRSLGLQPNNFTYSAILS 333
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/557 (32%), Positives = 289/557 (51%), Gaps = 48/557 (8%)
Query: 63 GKMTHCVAIQMGLDL-DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
GK V + G+ + ++ C++M+ Y K I AR +FD M R+V++WT+MI GY
Sbjct: 191 GKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYF 250
Query: 122 SERHVSVACDLFNKMRVE--LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
LF +MR E ++ NS TL VM +AC G+QIHG + + D
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL 310
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
+ NS++ MY+ G E + +F + +D SWN LI+ GL+ Q
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLIT------------GLVQRKQIS 358
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDIS 299
E + L K D V T ++ ++ G++
Sbjct: 359 EAYE---------------------------LFEKMPGKDMVSWTDMIKGFSGKGEISKC 391
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
V+LF + K IT AM+S F+ NG + EA+ F +M +++ + ++L A A+L
Sbjct: 392 VELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL 451
Query: 360 GALKLGRVVHGYLMK-NLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
L G +HG ++K N+ N +L ++ S+++MY + GN + A +F + ++++
Sbjct: 452 ADLIEGLQIHGRVVKMNIVN-----DLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVS 506
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
+ +MI G+ +GFG +ALK F+++ +PN VTFL+LLSAC H G V G K + SMK
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
+ IEP DH+ CMVDL GR G++ +A ++I M P S +WG+LL+AS + L
Sbjct: 567 SSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLA 626
Query: 539 EYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGV 598
E A++L+ELEPD+A + +LS + + G+ + + + K +KK PG S I +KG
Sbjct: 627 ELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGE 686
Query: 599 SYGFLSGDITHPEAEEI 615
+ FL+GD + EEI
Sbjct: 687 VHNFLAGDESQLNLEEI 703
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 184/426 (43%), Gaps = 46/426 (10%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMG-VPHDTFTFPVVNRALSSMRADAVYGKM 65
N + W I + G F F +MRQ G V ++ T V+ +A G
Sbjct: 238 NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDF-VRYREGSQ 296
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H + +M L+ DL+ N+++ Y K +G A+ VF +M ++D VSW S+I G + +
Sbjct: 297 IHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQ 356
Query: 126 VSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
+S A +LF KM ++ W+ +
Sbjct: 357 ISEAYELFEKM-----------------------------------PGKDMVSWT---DM 378
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
++ ++ KG + LF + ++D +W +IS + G ++M E N
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCP-N 437
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFR 304
T + V+SA A +L +G +H V+K +D+ +Q SL+ Y KCG + + ++F
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS 497
Query: 305 EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKL 364
I + ++ M+SG+ NG +A+ LF +++ + LL AC ++G + L
Sbjct: 498 CISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDL 557
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA-WTSMI 423
G + MK+ +N +E ++++ R G + A + MP K W S++
Sbjct: 558 GW-KYFKSMKSSYN--IEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLL 614
Query: 424 EGFGSH 429
+H
Sbjct: 615 SASKTH 620
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 182/406 (44%), Gaps = 62/406 (15%)
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
NS + +A G+ +E E +F +++ R + SW +IS Y+ G M + + +EM
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQL 302
S+N ++ + KC +L K + C + + + V +++ + + G+ D + L
Sbjct: 114 SYNAMITAMIKN---KC-DLGKAYELFCDIPE---KNAVSYATMITGFVRAGRFDEAEFL 166
Query: 303 FRE--IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
+ E + F+ + ++SG+++ G + EA+ +FQ M +++V +C+++
Sbjct: 167 YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVV-----------SCSSM- 214
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWT 420
VHGY + G I AR++FDRM ++VI WT
Sbjct: 215 -------VHGY------------------------CKMGRIVDARSLFDRMTERNVITWT 243
Query: 421 SMIEGFGSHGFGFEALKYF-NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKW 479
+MI+G+ GF + F + E ++ NS T + AC EG +I + +
Sbjct: 244 AMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI-HGLVS 302
Query: 480 GFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGE 539
+E L ++ ++ + G + EA + + ++ DS W +L+ +G+ K + E
Sbjct: 303 RMPLEFDLFLGNSLMSMYSKLGYMGEAKA-VFGVMKNKDSVSWNSLI--TGLVQRKQISE 359
Query: 540 YTAQRLLELEP--DNAGYHTLLSNVKASAGRWNEVEELRREMSEKD 583
A L E P D + ++ + G ++ EL M EKD
Sbjct: 360 --AYELFEKMPGKDMVSWTDMIKGF-SGKGEISKCVELFGMMPEKD 402
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 1 MEEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
M E+ N T W I V G + AL F KM Q V +++TF V A +S+ AD
Sbjct: 398 MPEKDNIT--WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASL-ADL 454
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+ G H ++M + DL N+++ Y KC A ++F + ++VS+ +MI+GY
Sbjct: 455 IEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGY 514
Query: 121 ISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQAC 154
A LF+ + EPN VT + +L AC
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSAC 549
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 287/546 (52%), Gaps = 10/546 (1%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
D Y N++I+ YVKC AR++FDLM R+VVSW +M+ GY + LF M
Sbjct: 68 DAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMF 127
Query: 138 V--ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGST 195
E PN V+ ++C S + G Q HG +K G++ V+N+++ MY+
Sbjct: 128 FSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGN 187
Query: 196 EEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISA 255
E + ++ D++ ++ +S Y G ++ + + E WN T +
Sbjct: 188 GEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTAN-EDFVWNNLTYLSSLRL 246
Query: 256 FAKCGNLSKGEGVHCLVIKTGFSDDVLQT-SLLDFYAKCGKLDISVQLFREIHFKSYITL 314
F+ +L+ VH +++ GF+ +V +L++ Y KCGK+ + ++F + H ++
Sbjct: 247 FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLN 306
Query: 315 GAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
+M + Q+ SF EA+ LF +M +++ + LL++ A L LK G ++HG ++K
Sbjct: 307 TTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLK 366
Query: 375 NLF-NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGF 433
+ + N + GN +++NMY + G+I AR F M +D++ W +MI G HG G
Sbjct: 367 SGYRNHVMVGN-----ALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGR 421
Query: 434 EALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCM 493
EAL+ F+ M+ PN +TF+ +L ACSH G V +G + + F ++P + H+TC+
Sbjct: 422 EALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCI 481
Query: 494 VDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNA 553
V L + GM K+A + I D W LL A V N LG+ A+ +E P+++
Sbjct: 482 VGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDS 541
Query: 554 GYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAE 613
G + LLSN+ A + W V ++R M+ + +KK+PG S I ++ ++ FL+ D HPE
Sbjct: 542 GVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEIT 601
Query: 614 EIYAAL 619
IYA +
Sbjct: 602 LIYAKV 607
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 190/424 (44%), Gaps = 11/424 (2%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMG--VPHDTFTFPVVNRALSSMRADAVYGK 64
N ++W ++ + + G L FK M G P++ V +S R + GK
Sbjct: 99 NVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEE--GK 156
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H ++ GL + NT++ Y C G A RV D + + D+ ++S ++GY+
Sbjct: 157 QFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECG 216
Query: 125 HVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
D+ K E N++T + L+ LN+ Q+H V+ G +
Sbjct: 217 AFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACG 276
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
+++ MY G + +F + + +++ ++ Y L ++M + E
Sbjct: 277 ALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPP 336
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVL-QTSLLDFYAKCGKLDISVQL 302
N T +++++ A+ L +G+ +H LV+K+G+ + V+ +L++ YAK G ++ + +
Sbjct: 337 -NEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKA 395
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
F + F+ +T M+SG +G EA+ F +M + + +L AC+++G +
Sbjct: 396 FSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFV 455
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTS 421
+ G LMK V+ ++ T I+ + + G A P++ DV+AW +
Sbjct: 456 EQGLHYFNQLMKKF---DVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRT 512
Query: 422 MIEG 425
++
Sbjct: 513 LLNA 516
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
LL CAN L++G +H +L+ + E + S++N+Y++ AR +FD M
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQI-NSLINLYVKCRETVRARKLFDLM 95
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLM-MEHRMQPNSVTFLSLLSACSHSGLVSEG 470
P ++V++W +M++G+ + GF FE LK F M +PN + +CS+SG + EG
Sbjct: 96 PERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEG 155
Query: 471 CKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSII 510
K ++ +G+ +V ++ C EA+ ++
Sbjct: 156 -KQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVL 194
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 279 bits (713), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 184/625 (29%), Positives = 318/625 (50%), Gaps = 39/625 (6%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P+ N +AWN + +V G+ A+ F MR+ GV T A ++M
Sbjct: 232 DEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANM-GGV 290
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
GK +H +AI G++LD ++++FY K I A VFD M +DVV+W +I+GY
Sbjct: 291 EEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGY 350
Query: 121 ISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
+ + V A + MR+E L+ + VTL ++ A + L +G ++ Y ++ D
Sbjct: 351 VQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDI 410
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
+ ++V+ MYA GS + + +F ++D+ WN L++ Y+ G L MQ L
Sbjct: 411 VLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ-L 469
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDIS 299
EG N+ T L+I + + G + + + D+
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAK------------------------------DMF 499
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+Q+ + I+ MM+G +QNG EAI ++MQ L L ACA+L
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHL 559
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAW 419
+L +GR +HGY+++NL + + + +ETS+++MY + G+I+ A VF ++
Sbjct: 560 ASLHIGRTIHGYIIRNLQHSSL---VSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS 616
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKW 479
+MI + +G EA+ + + ++P+++T ++LSAC+H+G +++ +I+ +
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 480 GFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGE 539
++P L+H+ MVDL G ++AL +I +M PD+R+ +L+A+ L +
Sbjct: 677 KRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVD 736
Query: 540 YTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVS 599
Y +++LLE EP+N+G + +SN A G W+EV ++R M K LKKKPG S I++ G
Sbjct: 737 YLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEE 796
Query: 600 --YGFLSGDITHPEAEEIYAALCTL 622
+ F++ D TH EI L L
Sbjct: 797 GVHVFVANDKTHTRINEIQMMLALL 821
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 132/462 (28%), Positives = 223/462 (48%), Gaps = 16/462 (3%)
Query: 59 DAVYGKMTHCVAIQMGLDLDLYFCNTMID-----FYVKCWCIGCARRVFDLMLHRDVVSW 113
D GK H ++ G D Y N I+ FY KC + A +F + R+V SW
Sbjct: 85 DLSTGKQIHARILKNG---DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSW 141
Query: 114 TSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVK 172
++I A F +M E+ P++ + + +AC A G +HGY VK
Sbjct: 142 AAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVK 201
Query: 173 SGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGL 232
SG+ V +S+ MY G ++ +F EI R+ +WN L+ Y G L
Sbjct: 202 SGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRL 261
Query: 233 INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYA 291
++M+ +G T++ +SA A G + +G+ H + I G D++L TSLL+FY
Sbjct: 262 FSDMRK-QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYC 320
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
K G ++ + +F + K +T ++SG++Q G +AI + Q M+ E L
Sbjct: 321 KVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
L+ A A LKLG+ V Y +++ F E ++ + +++++MY + G+I A+ VFD
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSF----ESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
KD+I W +++ + G EAL+ F M + PN +T+ ++ + +G V E
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
++ M+ GI P L T M++ + G +EA+ + KM
Sbjct: 497 DMFLQMQ-SSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 203/417 (48%), Gaps = 31/417 (7%)
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLR-----MYADKGSTEEVELLFSE 204
+LQ C L+ G QIH +K+G D+ +N + YA + E E+LFS+
Sbjct: 76 ILQGCVYERDLSTGKQIHARILKNG---DFYARNEYIETKLVIFYAKCDALEIAEVLFSK 132
Query: 205 INKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAK-CGNLS 263
+ R+V SW +I +G + L+ ++ LE I V+ K CG L
Sbjct: 133 LRVRNVFSWAAIIGVKCRIG--LCEGALMGFVEMLENE---IFPDNFVVPNVCKACGALK 187
Query: 264 ---KGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMS 319
G GVH V+K+G D V + +SL D Y KCG LD + ++F EI ++ + A+M
Sbjct: 188 WSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMV 247
Query: 320 GFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNG 379
G++QNG EAI LF M+ + + L A AN+G ++ G+ H + NG
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA---IVNG 304
Query: 380 PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYF 439
N+ + TS+LN Y + G I A VFDRM KDV+ W +I G+ G +A+
Sbjct: 305 MELDNI-LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 440 NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFG 498
LM +++ + VT +L+SA + + + G ++ Y ++ F E + + ++D++
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSF--ESDIVLASTVMDMYA 421
Query: 499 RCGMVKEALSIILKMVILPDSRIWGALLAA---SGVYGNKTLGEYTAQRLLELEPDN 552
+CG + +A + + D +W LLAA SG+ G Y Q LE P N
Sbjct: 422 KCGSIVDAKK-VFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ--LEGVPPN 475
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 12/262 (4%)
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
+ H S + +S +NG EA++L +M +L I PEI+ +L C L
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
G+ +H ++KN N ++ET ++ Y + + A +F ++ V++V +W ++I
Sbjct: 88 TGKQIHARILKN--GDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAII 145
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFG 482
G AL F M+E+ + P++ ++ AC G ++ Y +K G
Sbjct: 146 GVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVK--SG 203
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSR--IWGALLAASGVYGN--KTLG 538
+E + + + D++G+CG++ +A + + +PD W AL+ G + +
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDE---IPDRNAVAWNALMVGYVQNGKNEEAIR 260
Query: 539 EYTAQRLLELEPDNAGYHTLLS 560
++ R +EP T LS
Sbjct: 261 LFSDMRKQGVEPTRVTVSTCLS 282
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 178/553 (32%), Positives = 298/553 (53%), Gaps = 17/553 (3%)
Query: 85 MIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPN 143
++D +KC I AR+VFD M R +V+W S+IA I R A +++ M + P+
Sbjct: 105 LVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPD 164
Query: 144 SVTLIVMLQACCASTPLNVGTQIHGYAVKSGV-LMDWSVKNSVLRMYADKGSTEEVELLF 202
TL + +A + + HG AV G+ + + V ++++ MY G T E +L+
Sbjct: 165 EYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVL 224
Query: 203 SEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNL 262
+ ++DV LI YS G+ M + +++IS CGNL
Sbjct: 225 DRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS----CGNL 280
Query: 263 S---KGEGVHCLVIKTGFSDDVL-QTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
G+ +H L++K+GF + QTSLL Y +C +D S+++F+ I + + ++ +++
Sbjct: 281 KDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLI 340
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFN 378
SG +QNG A+ F++M + + + L C+NL + GR +HG + K F
Sbjct: 341 SGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGF- 399
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKY 438
+ + + + ++++Y + G AR VFD + DVI+ +MI + +GFG EAL
Sbjct: 400 ---DRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 439 FNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFG 498
F M+ +QPN VT LS+L AC++S LV EGC+++ S + I DH+ CMVDL G
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLG 515
Query: 499 RCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTL 558
R G ++EA ++ VI PD +W LL+A V+ + E +++LE+EP + G L
Sbjct: 516 RAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLIL 574
Query: 559 LSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDI-THPEAEEIYA 617
+SN+ AS G+WN V E++ +M + LKK P S +E+ ++ F++GD+ +HP +E+I
Sbjct: 575 MSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILE 634
Query: 618 ALCTLSRVTQDFG 630
L L + ++D G
Sbjct: 635 NLEELIKKSKDLG 647
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 197/432 (45%), Gaps = 25/432 (5%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHC 68
+ WN I + + A+ ++ M V D +T V +A S + + + +H
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEK-EAQRSHG 189
Query: 69 VAIQMGLDL-DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVS 127
+A+ +GL++ +++ + ++D YVK A+ V D + +DVV T++I GY + +
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 128 VACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVL 186
A F M VE ++PN T +L +C + G IHG VKSG + + S+L
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 187 RMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
MY ++ +F I + SW LIS +V + LI E + + S
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEYPNQVSWTSLIS--GLVQNGREEMALI-EFRKMMRDSIKP 366
Query: 247 ETLTLVISAFAKCGNLS---KGEGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQL 302
+ TL SA C NL+ +G +H +V K GF D S L+D Y KCG D++ +
Sbjct: 367 NSFTLS-SALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLV 425
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM-----QAEDLVIVPEIWRNLLDACA 357
F + I+L M+ + QNG EA+ LF++M Q D+ ++ ++L AC
Sbjct: 426 FDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVL-----SVLLACN 480
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVI 417
N ++ G + K+ + N H ++++ R G + A + + D++
Sbjct: 481 NSRLVEEGCELFDSFRKDKI---MLTNDHY-ACMVDLLGRAGRLEEAEMLTTEVINPDLV 536
Query: 418 AWTSMIEGFGSH 429
W +++ H
Sbjct: 537 LWRTLLSACKVH 548
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 137/261 (52%), Gaps = 5/261 (1%)
Query: 268 VHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSF 327
+ ++K+GF ++ + L+D KCG +D + Q+F + + +T ++++ I++
Sbjct: 87 IQAHMLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRS 146
Query: 328 MEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHM 387
EA+ +++ M +++ ++ A ++L K + HG + G N+ +
Sbjct: 147 KEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLA---VILGLEVSNVFV 203
Query: 388 ETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRM 447
+++++MY++ G A+ V DR+ KDV+ T++I G+ G EA+K F M+ ++
Sbjct: 204 GSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKV 263
Query: 448 QPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEAL 507
QPN T+ S+L +C + + G K+ + + G E AL T ++ ++ RC +V ++L
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNG-KLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSL 322
Query: 508 SIILKMVILPDSRIWGALLAA 528
+ K + P+ W +L++
Sbjct: 323 R-VFKCIEYPNQVSWTSLISG 342
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E N ++W I V G+ AL F+KM + + ++FT R S++ A G
Sbjct: 329 EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNL-AMFEEG 387
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
+ H + + G D D Y + +ID Y KC C AR VFD + DV+S +MI Y
Sbjct: 388 RQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQN 447
Query: 124 RHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
A DLF +M + L+PN VT++ +L AC S + G ++ K +++
Sbjct: 448 GFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY 507
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILIS 218
++ + G EE E+L +E+ D+ W L+S
Sbjct: 508 ACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLS 543
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 103/222 (46%), Gaps = 10/222 (4%)
Query: 341 DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGN 400
D + + LL C + ++ + + +++K+ F + G + +++ ++ G+
Sbjct: 60 DTLTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEISG-----SKLVDASLKCGD 114
Query: 401 ISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSA 460
I AR VFD M + ++ W S+I H EA++ + LM+ + + P+ T S+ A
Sbjct: 115 IDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA 174
Query: 461 CSHSGLVSEGCKIYYSMKWGFGIEPA-LDHHTCMVDLFGRCGMVKEALSIILKMVILPDS 519
S L E + + + G+E + + + +VD++ + G +EA ++L V D
Sbjct: 175 FSDLSLEKEAQR-SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREA-KLVLDRVEEKDV 232
Query: 520 RIWGALLAASGVYGNKTLGEYTAQRLL--ELEPDNAGYHTLL 559
+ AL+ G T Q +L +++P+ Y ++L
Sbjct: 233 VLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVL 274
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 162/488 (33%), Positives = 276/488 (56%), Gaps = 10/488 (2%)
Query: 136 MRVELEPNSVTLIVMLQACCA-STPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGS 194
+R P++ + +L++C + S P++ G Q+H + K G + V +++ MY G
Sbjct: 45 LRSGSSPDAFSFPFILKSCASLSLPVS-GQQLHCHVTKGGCETEPFVLTALISMYCKCGL 103
Query: 195 TEEVELLFSEINKRDVAS--WNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLV 252
+ +F E + S +N LIS Y+ + A + M+ G S + T+ +
Sbjct: 104 VADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKE-TGVSVDSVTMLGL 162
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSY 311
+ L G +H +K G +V + S + Y KCG ++ +LF E+ K
Sbjct: 163 VPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGL 222
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
IT A++SG+ QNG + + L++QM++ + P ++L +CA+LGA K+G V G
Sbjct: 223 ITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEV-GK 281
Query: 372 LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGF 431
L+++ NG V N+ + + ++MY R GN++ ARAVFD MPVK +++WT+MI +G HG
Sbjct: 282 LVES--NGFVP-NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGM 338
Query: 432 GFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHT 491
G L F+ M++ ++P+ F+ +LSACSHSGL +G +++ +MK + +EP +H++
Sbjct: 339 GEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYS 398
Query: 492 CMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPD 551
C+VDL GR G + EA+ I M + PD +WGALL A ++ N + E +++E EP+
Sbjct: 399 CLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPN 458
Query: 552 NAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPE 611
N GY+ L+SN+ + + + +R M E+ +KKPG+S +E KG + FL+GD +H +
Sbjct: 459 NIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQ 518
Query: 612 AEEIYAAL 619
EE++ L
Sbjct: 519 TEEVHRML 526
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/461 (26%), Positives = 216/461 (46%), Gaps = 20/461 (4%)
Query: 8 TMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTH 67
+ WN+ +R F ++S ++ M + G D F+FP + ++ +S+ V G+ H
Sbjct: 18 STPWNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSL-PVSGQQLH 76
Query: 68 CVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVS--WTSMIAGYISERH 125
C + G + + + +I Y KC + AR+VF+ +S + ++I+GY +
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 126 VSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
V+ A +F +M+ + +SVT++ ++ C L +G +HG VK G+ + +V NS
Sbjct: 137 VTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNS 196
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
+ MY GS E LF E+ + + +WN +IS YS G V L +M+S G
Sbjct: 197 FITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS-SGVCP 255
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLF 303
+ TL V+S+ A G G V LV GF +V + + + YA+CG L + +F
Sbjct: 256 DPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVF 315
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG--- 360
+ KS ++ AM+ + +G + LF M + ++ +L AC++ G
Sbjct: 316 DIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTD 375
Query: 361 -ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIA 418
L+L R MK + +E + ++++ R G + A + MPV+ D
Sbjct: 376 KGLELFRA-----MKREYK--LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAV 428
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
W +++ H A F ++E +PN++ + L+S
Sbjct: 429 WGALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMS 467
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 124/268 (46%), Gaps = 6/268 (2%)
Query: 2 EEEPNNT---MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRA 58
EE P ++ + +N I + + A F++M++ GV D+ T + L ++
Sbjct: 112 EENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGL-VPLCTVPE 170
Query: 59 DAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIA 118
G+ H ++ GLD ++ N+ I Y+KC + RR+FD M + +++W ++I+
Sbjct: 171 YLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVIS 230
Query: 119 GYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM 177
GY +L+ +M+ + P+ TL+ +L +C +G ++ +G +
Sbjct: 231 GYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP 290
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
+ V N+ + MYA G+ + +F + + + SW +I Y M G M + ++ +
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHG-MGEIGLMLFDDM 349
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKG 265
G + +V+SA + G KG
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKG 377
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 158/540 (29%), Positives = 295/540 (54%), Gaps = 14/540 (2%)
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWC-IGCARRVFDLMLHRDVVSWTSMIAG 119
++G H ++ GL+ D N+++ Y K + RRVFD +D +SWTSM++G
Sbjct: 78 IHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSG 137
Query: 120 YISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
Y++ + A ++F +M L+ N TL ++AC + +G HG + G +
Sbjct: 138 YVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWN 197
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQS 238
+ +++ +Y + +F E+ + DV W ++S +S GL M
Sbjct: 198 HFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHR 257
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLD 297
+G + T V++A L +G+ +H +I G S+ V+++SLLD Y KCG +
Sbjct: 258 GKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVR 317
Query: 298 ISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA 357
+ Q+F + K+ ++ A++ G+ QNG +AI +F++M+ +DL + +L ACA
Sbjct: 318 EARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYC----FGTVLKACA 373
Query: 358 NLGALKLGRVVHG-YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
L A++LG+ +HG Y+ + F GN+ +E++++++Y + G I SA V+ +M ++++
Sbjct: 374 GLAAVRLGKEIHGQYVRRGCF-----GNVIVESALIDLYGKSGCIDSASRVYSKMSIRNM 428
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
I W +M+ +G G EA+ +FN M++ ++P+ ++F+++L+AC H+G+V EG +
Sbjct: 429 ITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVL 488
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
M +GI+P +H++CM+DL GR G+ +EA +++ + D+ +WG LL + +
Sbjct: 489 MAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADAS 548
Query: 537 -LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEV 595
+ E A+R++ELEP + LLSN+ + GR + +R+ M + + K G S I+
Sbjct: 549 RVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWIDA 608
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/387 (28%), Positives = 190/387 (49%), Gaps = 24/387 (6%)
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKG-STEEVELLFSEINKR 208
+LQ C G Q H + VKSG+ D +V NS+L +Y G E +F +
Sbjct: 67 LLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVK 126
Query: 209 DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV 268
D SW ++S Y + ++ + EM S G N TL+ + A ++ G + G
Sbjct: 127 DAISWTSMMSGYVTGKEHVKALEVFVEMVSF-GLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 269 HCLVIKTGFSDDVLQTSLLDFYAKCGKLDISV-QLFREIHFKSYITLGAMMSGFIQNGSF 327
H +VI GF + +S L + + + ++F E+ I A++S F +N +
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 245
Query: 328 MEAIALFQQM-QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLH 386
EA+ LF M + + LV + +L AC NL LK G+ +HG L+ N + N+
Sbjct: 246 EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITN----GIGSNVV 301
Query: 387 METSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHR 446
+E+S+L+MY + G++ AR VF+ M K+ ++W++++ G+ +G +A++ F M E
Sbjct: 302 VESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKD 361
Query: 447 MQPNSVTFLSLLSACSHSGLVSEGCKIY--YSMKWGFG---IEPALDHHTCMVDLFGRCG 501
+ F ++L AC+ V G +I+ Y + FG +E AL +DL+G+ G
Sbjct: 362 L----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESAL------IDLYGKSG 411
Query: 502 MVKEALSIILKMVILPDSRIWGALLAA 528
+ A + KM I + W A+L+A
Sbjct: 412 CIDSASRVYSKMSI-RNMITWNAMLSA 437
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 192/413 (46%), Gaps = 12/413 (2%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+ ++W + +V + AL F +M G+ + FT +A S + + G+
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSEL-GEVRLGRC 184
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H V I G + + + +T+ Y ARRVFD M DV+ WT++++ +
Sbjct: 185 FHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDL 244
Query: 126 VSVACDLFNKMR--VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
A LF M L P+ T +L AC L G +IHG + +G+ + V++
Sbjct: 245 YEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVES 304
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
S+L MY GS E +F+ ++K++ SW+ L+ Y G+ + + EM+ + +
Sbjct: 305 SLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYC 364
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLDISVQL 302
+ V+ A A + G+ +H ++ G F + +++++L+D Y K G +D + ++
Sbjct: 365 FGT-----VLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRV 419
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
+ ++ ++ IT AM+S QNG EA++ F M + + + +L AC + G +
Sbjct: 420 YSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMV 479
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD 415
GR + K+ P G H + ++++ R G A + +R ++
Sbjct: 480 DEGRNYFVLMAKSYGIKP--GTEHY-SCMIDLLGRAGLFEEAENLLERAECRN 529
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 278 bits (711), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 193/652 (29%), Positives = 323/652 (49%), Gaps = 64/652 (9%)
Query: 27 ALSTFKKMRQMGVPH---------DTFTFPVVNRALSSMRADAV--YGKMTHCVAIQMGL 75
+L + + R +PH T +F + N LS + + + K I GL
Sbjct: 22 SLYSHSQRRTRSLPHHRDKPINWNSTHSFVLHNPLLSLLEKCKLLLHLKQIQAQMIINGL 81
Query: 76 DLDLYFCNTMIDFYVKCWCIGCARRVFDLML-------HRDVVSWTSMIAGYISERHVSV 128
LD + + +I F C R D + + ++ SW I G+ +
Sbjct: 82 ILDPFASSRLIAF-----CALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKE 136
Query: 129 ACDLFNKMR----VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
+ L+ +M E P+ T V+ + C ++G I G+ +K + + V N+
Sbjct: 137 SFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNA 196
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
+ M+A G E +F E RD+ SWN LI+ Y +G+ + + M+S EG
Sbjct: 197 SIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES-EGVKP 255
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTG--------------FSD----------- 279
+ T+ ++S+ + G+L++G+ + V + G FS
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIF 315
Query: 280 DVLQ-------TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIA 332
D L+ T+++ YA+CG LD+S +LF ++ K + AM+ G +Q +A+A
Sbjct: 316 DNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALA 375
Query: 333 LFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSIL 392
LFQ+MQ + + L AC+ LGAL +G +H Y+ K + N+ + TS++
Sbjct: 376 LFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKY----SLSLNVALGTSLV 431
Query: 393 NMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSV 452
+MY + GNIS A +VF + ++ + +T++I G HG A+ YFN M++ + P+ +
Sbjct: 432 DMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEI 491
Query: 453 TFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILK 512
TF+ LLSAC H G++ G + MK F + P L H++ MVDL GR G+++EA ++
Sbjct: 492 TFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 513 MVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEV 572
M + D+ +WGALL ++GN LGE A++LLEL+P ++G + LL + A W +
Sbjct: 552 MPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDA 611
Query: 573 EELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSR 624
+ RR M+E+ ++K PG S IEV G+ F+ D + PE+E+IY L L R
Sbjct: 612 KRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYDRLHCLGR 663
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 219/465 (47%), Gaps = 44/465 (9%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPH---DTFTFPVVNRALSSMRADA 60
E N +WN+TIR + + +K+M + G D FT+PV+ + + +R +
Sbjct: 114 ENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSS 173
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+ G M +++ L+L + N I + C + AR+VFD RD+VSW +I GY
Sbjct: 174 L-GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGY 232
Query: 121 ISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
A ++ M E ++P+ VT+I ++ +C LN G + + Y ++G+ M
Sbjct: 233 KKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTI 292
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
+ N+++ M++ G E +F + KR + SW +IS Y+ G + L ++M+
Sbjct: 293 PLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK 352
Query: 240 EGHSWNI----------------------------ETLTLV--ISAFAKCGNLSKGEGVH 269
+ WN + +T++ +SA ++ G L G +H
Sbjct: 353 DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIH 412
Query: 270 CLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
+ K S +V L TSL+D YAKCG + ++ +F I ++ +T A++ G +G
Sbjct: 413 RYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDAS 472
Query: 329 EAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLH 386
AI+ F +M D I P+ + LL AC + G ++ GR MK+ FN + L
Sbjct: 473 TAISYFNEMI--DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQ-MKSRFN--LNPQLK 527
Query: 387 METSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGSHG 430
+ ++++ R G + A + + MP++ D W +++ G HG
Sbjct: 528 HYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHG 572
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 167/530 (31%), Positives = 277/530 (52%), Gaps = 20/530 (3%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEP 142
N ++ Y+K I AR VF+LM R+VVSWT+M+ GY+ E V A LF +M E
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP---ER 139
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
N V+ VM ++ +++ V+ ++ + R +G +E L+F
Sbjct: 140 NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCR----EGRVDEARLIF 195
Query: 203 SEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNL 262
E+ +R+V +W +I+ Y + L M SW T ++ + G +
Sbjct: 196 DEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSW-----TSMLLGYTLSGRI 250
Query: 263 SKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFI 322
E ++ + +++ + + G++ + ++F + + T M+ +
Sbjct: 251 EDAEEFFEVM---PMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYE 307
Query: 323 QNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVE 382
+ G +EA+ LF QMQ + + ++L CA L +L+ GR VH +L++ F+ V
Sbjct: 308 RKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDV- 366
Query: 383 GNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
++ + ++ MY++ G + A+ VFDR KD+I W S+I G+ SHG G EALK F+ M
Sbjct: 367 ---YVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEM 423
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGM 502
PN VT +++L+ACS++G + EG +I+ SM+ F + P ++H++C VD+ GR G
Sbjct: 424 PSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQ 483
Query: 503 VKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNV 562
V +A+ +I M I PD+ +WGALL A + L E A++L E EPDNAG + LLS++
Sbjct: 484 VDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSI 543
Query: 563 KASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDI-THPE 611
AS +W +V +R+ M ++ K PG S IEV + F G I HPE
Sbjct: 544 NASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPE 593
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 4/251 (1%)
Query: 82 CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-L 140
CN MI + + I ARRVFDLM RD +W MI Y + A DLF +M+ + +
Sbjct: 268 CNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGV 327
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
P+ +LI +L C L G Q+H + V+ D V + ++ MY G + +L
Sbjct: 328 RPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKL 387
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+F + +D+ WN +IS Y+ G + +EM S G N TL +++A + G
Sbjct: 388 VFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS-SGTMPNKVTLIAILTACSYAG 446
Query: 261 NLSKG-EGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
L +G E + K + V S +D + G++D +++L + K T+ +
Sbjct: 447 KLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGAL 506
Query: 319 SGFIQNGSFME 329
G + S ++
Sbjct: 507 LGACKTHSRLD 517
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 168/388 (43%), Gaps = 56/388 (14%)
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFY---------------------- 220
NS++ Y G +E LF E+++R+V SWN L+S Y
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 221 ---SMVGDMMRVAGLINEMQSL--EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT 275
+MV M+ G++ E +SL N + T++ G + K ++ ++
Sbjct: 112 SWTAMVKGYMQ-EGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMM--- 167
Query: 276 GFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQ 335
D V T+++ + G++D + +F E+ ++ +T M++G+ QN A LF+
Sbjct: 168 PVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFE 227
Query: 336 QMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMY 395
M + V W ++L LG GR+ + P++ + I+ +
Sbjct: 228 VMPEKTEV----SWTSML-----LGYTLSGRIEDAEEFFEVM--PMKPVIACNAMIVG-F 275
Query: 396 IRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFL 455
G IS AR VFD M +D W MI+ + GF EAL F M + ++P+ + +
Sbjct: 276 GEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLI 335
Query: 456 SLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH----TCMVDLFGRCGMVKEALSIIL 511
S+LS C+ + G +++ + + D + ++ ++ +CG + +A ++
Sbjct: 336 SILSVCATLASLQYGRQVHAHL-----VRCQFDDDVYVASVLMTMYVKCGELVKA-KLVF 389
Query: 512 KMVILPDSRIWGALLAASGVYGNKTLGE 539
D +W ++++ Y + LGE
Sbjct: 390 DRFSSKDIIMWNSIISG---YASHGLGE 414
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 1 MEEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALS--SMRA 58
ME+ N T W I+ + G AL F +M++ GV +FP + LS + A
Sbjct: 291 MEDRDNAT--WRGMIKAYERKGFELEALDLFAQMQKQGVRP---SFPSLISILSVCATLA 345
Query: 59 DAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIA 118
YG+ H ++ D D+Y + ++ YVKC + A+ VFD +D++ W S+I+
Sbjct: 346 SLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIIS 405
Query: 119 GYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQI 166
GY S A +F++M PN VTLI +L AC + L G +I
Sbjct: 406 GYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 125/314 (39%), Gaps = 32/314 (10%)
Query: 193 GSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLV 252
G E F + + + SWN ++S Y G L +EM SWN +
Sbjct: 31 GKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN-----GL 85
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYI 312
+S + K + + V L+ + V T+++ Y + G + + LF + ++ +
Sbjct: 86 VSGYIKNRMIVEARNVFELMPERNV---VSWTAMVKGYMQEGMVGEAESLFWRMPERNEV 142
Query: 313 TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI------------WRNLLDACANLG 360
+ M G I +G +A L+ M +D+V + R + D
Sbjct: 143 SWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 361 ALKLGRVVHGYLMKN-------LFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV 413
+ ++ GY N LF E TS+L Y G I A F+ MP+
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPM 262
Query: 414 KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKI 473
K VIA +MI GFG G +A + F+LM + ++ T+ ++ A G E +
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLMEDR----DNATWRGMIKAYERKGFELEALDL 318
Query: 474 YYSMKWGFGIEPAL 487
+ M+ G+ P+
Sbjct: 319 FAQMQ-KQGVRPSF 331
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 135/308 (43%), Gaps = 42/308 (13%)
Query: 291 AKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV------- 343
++ GK++ + + F + FK+ + +++SG+ NG EA LF +M ++V
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 344 ------IVPEIWRNLLDACANLGALKLGRVVHGYLM-------KNLFNGPVEGNLHMETS 390
++ E RN+ + + +V GY+ ++LF E N T
Sbjct: 88 GYIKNRMIVEA-RNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTV 146
Query: 391 ILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPN 450
+ I G I AR ++D MPVKDV+A T+MI G G EA F+ M E N
Sbjct: 147 MFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRER----N 202
Query: 451 SVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSII 510
VT+ ++++ + V K++ M E T M+ + G +++A
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMP-----EKTEVSWTSMLLGYTLSGRIEDAEEFF 257
Query: 511 LKMVILPDSRIWGALLAASGVYGNKTLGEYT-AQRLLEL--EPDNAGYHTLLSNVKASAG 567
M + P + + + G +GE + A+R+ +L + DNA + + +KA
Sbjct: 258 EVMPMKP------VIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGM---IKAYER 308
Query: 568 RWNEVEEL 575
+ E+E L
Sbjct: 309 KGFELEAL 316
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 300/568 (52%), Gaps = 11/568 (1%)
Query: 55 SMRADAVYGKMTHCVAIQMG-LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSW 113
+ R D V G+ H ++ G LD ++++ Y KC + A VF RDV +
Sbjct: 71 AQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGY 129
Query: 114 TSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVK 172
++I+G++ A + + +MR + P+ T +L+ A +V ++HG A K
Sbjct: 130 NALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV-KKVHGLAFK 188
Query: 173 SGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVAS-WNILISFYSMVGDMMRVAG 231
G D V + ++ Y+ S E+ + +F E+ RD + WN L++ YS +
Sbjct: 189 LGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALL 248
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFY 290
+ ++M+ EG + T+T V+SAF G++ G +H L +KTG SD V+ +L+D Y
Sbjct: 249 VFSKMRE-EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMY 307
Query: 291 AKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI-- 348
K L+ + +F + + T +++ G +ALF++M I P+I
Sbjct: 308 GKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSG--IRPDIVT 365
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
+L C L +L+ GR +HGY++ + N + S+++MY++ G++ AR VF
Sbjct: 366 LTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVF 425
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
D M VKD +W MI G+G G AL F+ M ++P+ +TF+ LL ACSHSG ++
Sbjct: 426 DSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLN 485
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
EG M+ + I P DH+ C++D+ GR ++EA + + I + +W ++L++
Sbjct: 486 EGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSS 545
Query: 529 SGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKP 588
++GNK L +RL ELEP++ G + L+SNV AG++ EV ++R M ++++KK P
Sbjct: 546 CRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTP 605
Query: 589 GWSCIEVKGVSYGFLSGDITHPEAEEIY 616
G S I +K + F +G+ THPE + I+
Sbjct: 606 GCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 197/432 (45%), Gaps = 14/432 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ +N I V G A+ T+++MR G+ D +TFP + + +M V K
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDV--KKV 182
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR-DVVSWTSMIAGYISERH 125
H +A ++G D D Y + ++ Y K + A++VFD + R D V W +++ GY
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A +F+KMR E + + T+ +L A S ++ G IHG AVK+G D V N+
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
++ MY EE +F +++RD+ +WN ++ + GD L M G
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML-CSGIRP 361
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-----SDDVLQTSLLDFYAKCGKLDIS 299
+I TLT V+ + +L +G +H +I +G S++ + SL+D Y KCG L +
Sbjct: 362 DIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDA 421
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+F + K + M++G+ A+ +F M + + LL AC++
Sbjct: 422 RMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHS 481
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD-VIA 418
G L GR M+ ++N + +++M R + A + P+ D +
Sbjct: 482 GFLNEGRNFLAQ-METVYN--ILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVV 538
Query: 419 WTSMIEGFGSHG 430
W S++ HG
Sbjct: 539 WRSILSSCRLHG 550
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 212/478 (44%), Gaps = 28/478 (5%)
Query: 110 VVSWTSMIAGYISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGY 169
+ S S ++G I E N R E N T I LQ C G QIHG+
Sbjct: 37 LASLYSTVSGQIEE----------NPKRYE-HHNVATCIATLQRCAQRKDYVSGQQIHGF 85
Query: 170 AVKSGVLMDWS-VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMR 228
V+ G L D S++ MYA G L+F ++RDV +N LIS + + G +
Sbjct: 86 MVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERDVFGYNALISGFVVNGSPLD 144
Query: 229 VAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLL 287
EM++ G + T ++ + LS + VH L K GF SD + + L+
Sbjct: 145 AMETYREMRA-NGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYVGSGLV 202
Query: 288 DFYAKCGKLDISVQLFREIHFKSYITL-GAMMSGFIQNGSFMEAIALFQQMQAEDLVIVP 346
Y+K ++ + ++F E+ + L A+++G+ Q F +A+ +F +M+ E + +
Sbjct: 203 TSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSR 262
Query: 347 EIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARA 406
++L A G + GR +HG +K ++ + ++++MY + + A +
Sbjct: 263 HTITSVLSAFTVSGDIDNGRSIHGLAVKT----GSGSDIVVSNALIDMYGKSKWLEEANS 318
Query: 407 VFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGL 466
+F+ M +D+ W S++ G L F M+ ++P+ VT ++L C
Sbjct: 319 IFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLAS 378
Query: 467 VSEGCKIY-YSMKWGFGIEPALDH--HTCMVDLFGRCGMVKEALSIILKMVILPDSRIWG 523
+ +G +I+ Y + G + + H ++D++ +CG +++A + M + DS W
Sbjct: 379 LRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRV-KDSASWN 437
Query: 524 ALLAASGVY--GNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREM 579
++ GV G L ++ ++PD + LL S G NE +M
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHS-GFLNEGRNFLAQM 494
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 10/226 (4%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
+ ++++ WN + + + +F AL F KMR+ GV T V A ++ D G
Sbjct: 223 DRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAF-TVSGDIDNG 281
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSM--IAGYI 121
+ H +A++ G D+ N +ID Y K + A +F+ M RD+ +W S+ + Y
Sbjct: 282 RSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYC 341
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ ++A LF +M + P+ VTL +L C L G +IHGY + SG+L S
Sbjct: 342 GDHDGTLA--LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKS 399
Query: 181 ----VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSM 222
+ NS++ MY G + ++F + +D ASWNI+I+ Y +
Sbjct: 400 SNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGV 445
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 284/510 (55%), Gaps = 52/510 (10%)
Query: 148 IVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGS-TEEVELL----- 201
+ +LQ+C + + L + IHG+ +++ ++ D V + +L + D + + LL
Sbjct: 16 LALLQSCSSFSDLKI---IHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYG 72
Query: 202 -FSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW--NIETLTLVISAFAK 258
FS+I ++ +N+LI +S + + G +M L+ W NI T +I A ++
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQM--LKSRIWPDNI-TFPFLIKASSE 129
Query: 259 CGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYA-------------------------- 291
+ GE H +++ GF +DV ++ SL+ YA
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 292 -----KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVP 346
KCG ++ + ++F E+ ++ T M++G+ +N F +AI LF+ M+ E +V
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 347 EIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARA 406
+ +++ +CA+LGAL+ G + Y++K+ + NL + T++++M+ R G+I A
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKS----HMTVNLILGTALVDMFWRCGDIEKAIH 305
Query: 407 VFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGL 466
VF+ +P D ++W+S+I+G HG +A+ YF+ M+ P VTF ++LSACSH GL
Sbjct: 306 VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGL 365
Query: 467 VSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALL 526
V +G +IY +MK GIEP L+H+ C+VD+ GR G + EA + ILKM + P++ I GALL
Sbjct: 366 VEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
Query: 527 AASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKK 586
A +Y N + E L++++P+++GY+ LLSN+ A AG+W+++E LR M EK +KK
Sbjct: 426 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485
Query: 587 KPGWSCIEVKGVSYGFLSG-DITHPEAEEI 615
PGWS IE+ G F G D HPE +I
Sbjct: 486 PPGWSLIEIDGKINKFTMGDDQKHPEMGKI 515
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 151/347 (43%), Gaps = 37/347 (10%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N +NL IR + A + +M + + D TFP + +A S M V G+ T
Sbjct: 81 NLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV-GEQT 139
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H ++ G D+Y N+++ Y C I A R+F M RDVVSWTSM+AGY V
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMV 199
Query: 127 SVACDLFNKM--------------------------------RVELEPNSVTLIVMLQAC 154
A ++F++M R + N ++ ++ +C
Sbjct: 200 ENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSC 259
Query: 155 CASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWN 214
L G + + Y VKS + ++ + +++ M+ G E+ +F + + D SW+
Sbjct: 260 AHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWS 319
Query: 215 ILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIK 274
+I ++ G + ++M SL G T T V+SA + G + KG ++ + K
Sbjct: 320 SIIKGLAVHGHAHKAMHYFSQMISL-GFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKK 378
Query: 275 TGFSDDVLQT--SLLDFYAKCGKLDISVQLFREIHFK-SYITLGAMM 318
+ L+ ++D + GKL + ++H K + LGA++
Sbjct: 379 DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALL 425
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/482 (32%), Positives = 267/482 (55%), Gaps = 6/482 (1%)
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
+LQ C + + HG ++ + D ++ N ++ Y+ G E +F + +R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ SWN +I Y+ + EM++ EG ++ T++ V+SA + + + +H
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRN-EGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 270 CLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
CL +KT ++ + T+LLD YAKCG + +VQ+F + KS +T +M++G++QN ++
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 329 EAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
EA+ L+++ Q L +++ AC+NL AL G+ +H + K+ F N+ +
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGS----NVFVA 301
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ 448
+S ++MY + G++ + +F + K++ W ++I GF H E + F M + M
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALS 508
PN VTF SLLS C H+GLV EG + + M+ +G+ P + H++CMVD+ GR G++ EA
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 509 IILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGR 568
+I + P + IWG+LLA+ VY N L E A++L ELEP+NAG H LLSN+ A+ +
Sbjct: 422 LIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQ 481
Query: 569 WNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQD 628
W E+ + R+ + + D+KK G S I++K + F G+ HP EI + L L +
Sbjct: 482 WEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRK 541
Query: 629 FG 630
FG
Sbjct: 542 FG 543
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 189/373 (50%), Gaps = 16/373 (4%)
Query: 56 MRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTS 115
M A A +GK+ I++ L+ D+ N +I+ Y KC + AR+VFD ML R +VSW +
Sbjct: 78 MEAKACHGKI-----IRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 132
Query: 116 MIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG 174
MI Y R S A D+F +MR E + + T+ +L AC + ++H +VK+
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 175 VLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLIN 234
+ ++ V ++L +YA G ++ +F + + +W+ +++ Y + L
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 235 EMQ--SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYA 291
Q SLE + + TL+ VI A + L +G+ +H ++ K+GF +V + +S +D YA
Sbjct: 253 RAQRMSLEQNQF---TLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYA 309
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
KCG L S +F E+ K+ ++SGF ++ E + LF++MQ + + + +
Sbjct: 310 KCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSS 369
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
LL C + G ++ GR LM+ + + N+ + ++++ R G +S A + +
Sbjct: 370 LLSVCGHTGLVEEGRRFFK-LMRTTYG--LSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Query: 412 PVKDVIA-WTSMI 423
P + W S++
Sbjct: 427 PFDPTASIWGSLL 439
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 150/303 (49%), Gaps = 5/303 (1%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHC 68
++WN I + AL F +MR G FT V A + DA+ K HC
Sbjct: 128 VSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA-CGVNCDALECKKLHC 186
Query: 69 VAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSV 128
++++ +DL+LY ++D Y KC I A +VF+ M + V+W+SM+AGY+ ++
Sbjct: 187 LSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEE 246
Query: 129 ACDLFNK-MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLR 187
A L+ + R+ LE N TL ++ AC L G Q+H KSG + V +S +
Sbjct: 247 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVD 306
Query: 188 MYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
MYA GS E ++FSE+ ++++ WN +IS ++ V L +MQ +G N
Sbjct: 307 MYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ-DGMHPNEV 365
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKT-GFSDDVLQTS-LLDFYAKCGKLDISVQLFRE 305
T + ++S G + +G L+ T G S +V+ S ++D + G L + +L +
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 306 IHF 308
I F
Sbjct: 426 IPF 428
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 2/152 (1%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
+ +++ W+ + +V + AL +++ ++M + + FT V A S++ A + G
Sbjct: 224 QDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNL-AALIEG 282
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K H V + G +++ ++ +D Y KC + + +F + +++ W ++I+G+
Sbjct: 283 KQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKH 342
Query: 124 RHVSVACDLFNKMRVE-LEPNSVTLIVMLQAC 154
LF KM+ + + PN VT +L C
Sbjct: 343 ARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 374
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 181/599 (30%), Positives = 308/599 (51%), Gaps = 15/599 (2%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDT---FTFPVVNRALSSMR 57
+E P+ + +AW I HV G+ L KM G D T +A S++
Sbjct: 185 DEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLG 244
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
A G+ H A++ GL + ++M FY K A F + D+ SWTS+I
Sbjct: 245 A-LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSII 303
Query: 118 AGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
A + + D+F +M+ + + P+ V + ++ + G HG+ ++
Sbjct: 304 ASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFS 363
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKR-DVASWNILISFYSMVGDMMRVAGLINE 235
+D +V NS+L MY E LF I++ + +WN ++ Y + ++ L +
Sbjct: 364 LDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRK 423
Query: 236 MQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCG 294
+Q+L G + + T VIS+ + G + G+ +HC V+KT + + SL+D Y K G
Sbjct: 424 IQNL-GIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMG 482
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
L ++ ++F E + IT AM++ ++ +AIALF +M +E+ LL
Sbjct: 483 DLTVAWRMFCEAD-TNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLM 541
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
AC N G+L+ G+++H Y+ + E NL + ++++MY + G++ +R +FD K
Sbjct: 542 ACVNTGSLERGQMIHRYITET----EHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQK 597
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
D + W MI G+G HG A+ F+ M E ++P TFL+LLSAC+H+GLV +G K++
Sbjct: 598 DAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF 657
Query: 475 YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN 534
M + ++P L H++C+VDL R G ++EA S ++ M PD IWG LL++ +G
Sbjct: 658 LKMHQ-YDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGE 716
Query: 535 KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
+G A+R + +P N GY+ +L+N+ ++AG+W E E R M E + K+ G S +
Sbjct: 717 FEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 182 bits (461), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 151/593 (25%), Positives = 287/593 (48%), Gaps = 20/593 (3%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN I+ H G + +L F M G D FT P+V A + + V G H +
Sbjct: 93 WNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHV-GTFVHGLV 151
Query: 71 IQMG-LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI----SERH 125
++ G D + + + FY KC + A VFD M RDVV+WT++I+G++ SE
Sbjct: 152 LKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGG 211
Query: 126 VSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
+ C + + +PN TL QAC L G +HG+AVK+G+ V++S+
Sbjct: 212 LGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
Y+ G+ E L F E+ D+ SW +I+ + GDM + EMQ+ H
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDG 331
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFR 304
+ ++ +I+ K + +G+ H VI+ FS D + SLL Y K L ++ +LF
Sbjct: 332 V-VISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFC 390
Query: 305 EIHFK-SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
I + + M+ G+ + ++ I LF+++Q + I +++ +C+++GA+
Sbjct: 391 RISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVL 450
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
LG+ +H Y++K ++ + + S++++Y + G+++ A +F +VI W +MI
Sbjct: 451 LGKSLHCYVVKT----SLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMI 505
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGI 483
+ +A+ F+ M+ +P+S+T ++LL AC ++G + G I+ +
Sbjct: 506 ASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITET-EH 564
Query: 484 EPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN--KTLGEYT 541
E L ++D++ +CG ++++ + D+ W +++ G++G+ + +
Sbjct: 565 EMNLSLSAALIDMYAKCGHLEKSRE-LFDAGNQKDAVCWNVMISGYGMHGDVESAIALFD 623
Query: 542 AQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKK-PGWSCI 593
+++P + LLS AG + ++L +M + D+K +SC+
Sbjct: 624 QMEESDVKPTGPTFLALLSAC-THAGLVEQGKKLFLKMHQYDVKPNLKHYSCL 675
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 224/467 (47%), Gaps = 19/467 (4%)
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE-RHVSVA 129
I GL +++ + +I Y + RVF L+ RD+ W S+I + S +
Sbjct: 51 ITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSL 110
Query: 130 CDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL-MDWSVKNSVLRM 188
C F+ + P+ T +++ AC +VGT +HG +K G + +V S +
Sbjct: 111 CFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYF 170
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL--EGHSWNI 246
Y+ G ++ L+F E+ RDV +W +IS + G+ G + +M S + N
Sbjct: 171 YSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNP 230
Query: 247 ETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFRE 305
TL A + G L +G +H +K G S +Q+S+ FY+K G + FRE
Sbjct: 231 RTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRE 290
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
+ + + ++++ ++G E+ +F +MQ + + + L++ + + G
Sbjct: 291 LGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG 350
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIE 424
+ HG+++++ F+ + + S+L+MY + +S A +F R+ + + AW +M++
Sbjct: 351 KAFHGFVIRHCFS----LDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGI 483
G+G + ++ F + ++ +S + S++S+CSH G V G ++ Y +K +
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 484 EPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI--WGALLAA 528
++ + ++DL+G+ G L++ +M D+ + W A++A+
Sbjct: 467 TISVVNS--LIDLYGKMG----DLTVAWRMFCEADTNVITWNAMIAS 507
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 162/359 (45%), Gaps = 19/359 (5%)
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V + ++ YA G +F + +RD+ WN +I + GD R M L
Sbjct: 61 VASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSML-LS 119
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSD--DVLQTSLLDFYAKCGKLDI 298
G S + T +V+SA A+ G VH LV+K G D + S + FY+KCG L
Sbjct: 120 GQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQD 179
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL---LDA 355
+ +F E+ + + A++SG +QNG + +M + + R L A
Sbjct: 180 ACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQA 239
Query: 356 CANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD 415
C+NLGALK GR +HG+ +KN + + +++S+ + Y + GN S A F + +D
Sbjct: 240 CSNLGALKEGRCLHGFAVKN----GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDED 295
Query: 416 VIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYY 475
+ +WTS+I G E+ F M M P+ V L++ LV +G K ++
Sbjct: 296 MFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG-KAFH 354
Query: 476 SMKWGFGIEP--ALDHHTC--MVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASG 530
GF I +LD C ++ ++ + ++ A + ++ + W +L G
Sbjct: 355 ----GFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYG 409
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 110/245 (44%), Gaps = 18/245 (7%)
Query: 271 LVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFME 329
L+I G S+++ S L+ YA GK ++S ++F + + +++ NG +
Sbjct: 49 LIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYAR 108
Query: 330 AIALFQQM----QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNL 385
++ F M Q+ D P + + ACA L +G VHG ++K+ G + N
Sbjct: 109 SLCFFFSMLLSGQSPDHFTAPMV----VSACAELLWFHVGTFVHGLVLKH---GGFDRNT 161
Query: 386 HMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH 445
+ S + Y + G + A VFD MP +DV+AWT++I G +G L Y M
Sbjct: 162 AVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSA 221
Query: 446 RM---QPNSVTFLSLLSACSHSGLVSEG-CKIYYSMKWGFGIEPALDHHTCMVDLFGRCG 501
+PN T ACS+ G + EG C +++K G + + M + + G
Sbjct: 222 GSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFV--QSSMFSFYSKSG 279
Query: 502 MVKEA 506
EA
Sbjct: 280 NPSEA 284
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/591 (30%), Positives = 301/591 (50%), Gaps = 26/591 (4%)
Query: 10 AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCV 69
+W + + G F L F MR V + +A + + D V G H
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV-GDLVKGIAIHDY 325
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA 129
A+Q GL D+ +++ Y KC + A ++F + RDVVSW++MIA Y A
Sbjct: 326 AVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEA 385
Query: 130 CDLF-NKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
LF + MR+ ++PN+VTL +LQ C +G IH YA+K+ + + +V+ M
Sbjct: 386 ISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISM 445
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
YA G F + +D ++N L Y+ +GD + + M+ L G + T
Sbjct: 446 YAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK-LHGVCPDSRT 504
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIH 307
+ ++ A C + ++G V+ +IK GF + + +L++ + KC L ++ LF +
Sbjct: 505 MVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCG 564
Query: 308 F-KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
F KS ++ MM+G++ +G EA+A F+QM+ E + N++ A A L AL++G
Sbjct: 565 FEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGM 624
Query: 367 VVHGYLMKNLF--NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
VH L++ F PV GN S+++MY + G I S+ F + K +++W +M+
Sbjct: 625 SVHSSLIQCGFCSQTPV-GN-----SLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLS 678
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
+ +HG A+ F M E+ ++P+SV+FLS+LSAC H+GLV EG +I+ M IE
Sbjct: 679 AYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIE 738
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
++H+ CMVDL G+ G+ EA+ ++ +M + +WGALL +S ++ N L +
Sbjct: 739 AEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQ 798
Query: 545 LLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEV 595
L++LEP N +++ R EV + R +KK P S IEV
Sbjct: 799 LVKLEPLNPSHYS-------QDRRLGEVNNVSR------IKKVPACSWIEV 836
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 153/576 (26%), Positives = 282/576 (48%), Gaps = 23/576 (3%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKM-RQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCV 69
WN IR + G AL F M + G+ D ++F +A + D G H +
Sbjct: 67 WNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAG-SMDFKKGLRIHDL 125
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA 129
+MGL+ D+Y +++ Y K + AR+VFD M +DVV+W +M++G S A
Sbjct: 126 IAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAA 185
Query: 130 CDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
LF+ MR ++ + V+L ++ A +V +HG +K G + +S + ++ M
Sbjct: 186 LLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS--SGLIDM 243
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
Y + E +F E+ ++D +SW +++ Y+ G V L + M++ + N
Sbjct: 244 YCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR-MNKVA 302
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIH 307
+ A A G+L KG +H ++ G DV + TSL+ Y+KCG+L+I+ QLF I
Sbjct: 303 AASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIE 362
Query: 308 FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRV 367
+ ++ AM++ + Q G EAI+LF+ M + ++L CA + A +LG+
Sbjct: 363 DRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKS 422
Query: 368 VHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFG 427
+H Y +K +E L T++++MY + G S A F+R+P+KD +A+ ++ +G+
Sbjct: 423 IHCYAIK----ADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYT 478
Query: 428 SHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS-MKWGFGIEPA 486
G +A + M H + P+S T + +L C+ + G +Y +K GF E
Sbjct: 479 QIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECH 538
Query: 487 LDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN--KTLGEYTAQR 544
+ H ++++F +C + A+ + K + W ++ ++G + + + +
Sbjct: 539 VAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMK 596
Query: 545 LLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMS 580
+ + +P+ T ++ V+A+A E+ LR MS
Sbjct: 597 VEKFQPNAV---TFVNIVRAAA----ELSALRVGMS 625
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 215/462 (46%), Gaps = 18/462 (3%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE--LEPNSVTLIVMLQACC 155
+R +FD + VV W SMI GY A F M E ++P+ + L+AC
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 156 ASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNI 215
S G +IH + G+ D + +++ MY +F +++ +DV +WN
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 216 LISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTL--VISAFAKCGNLSKGEGVHCLVI 273
++S + G L ++M+S +I+ ++L +I A +K +H LVI
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSC---CVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVI 228
Query: 274 KTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIAL 333
K GF + L+D Y C L + +F E+ K + G MM+ + NG F E + L
Sbjct: 229 KKGFI-FAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLEL 287
Query: 334 FQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN 393
F M+ D+ + + L A A +G L G +H Y ++ + G++ + TS+++
Sbjct: 288 FDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQ----GLIGDVSVATSLMS 343
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
MY + G + A +F + +DV++W++MI + G EA+ F MM ++PN+VT
Sbjct: 344 MYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403
Query: 454 FLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILK 512
S+L C+ G I+ Y++K IE L+ T ++ ++ +CG AL +
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKA--DIESELETATAVISMYAKCGRFSPALKAFER 461
Query: 513 MVILPDSRIWGALLAASGVYG--NKTLGEYTAQRLLELEPDN 552
+ I D+ + AL G NK Y +L + PD+
Sbjct: 462 LPI-KDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDS 502
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 128/273 (46%), Gaps = 14/273 (5%)
Query: 258 KCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
+C N VH +I +G L++ Y+ + D+S +F + + +M
Sbjct: 14 ECKNFRCLLQVHGSLIVSGLKP---HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSM 70
Query: 318 MSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL--LDACANLGALKLGRVVHGYLMKN 375
+ G+ + G EA+ F M +E+ I P+ + L ACA K G +H + +
Sbjct: 71 IRGYTRAGLHREALGFFGYM-SEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEM 129
Query: 376 LFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEA 435
+E ++++ T+++ MY + ++ SAR VFD+M VKDV+ W +M+ G +G A
Sbjct: 130 ----GLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAA 185
Query: 436 LKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVD 495
L F+ M + + V+ +L+ A S S+ C+ + + G A + ++D
Sbjct: 186 LLLFHDMRSCCVDIDHVSLYNLIPAVSKLE-KSDVCRCLHGLVIKKGFIFAFS--SGLID 242
Query: 496 LFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
++ C + A S + + V D WG ++AA
Sbjct: 243 MYCNCADLYAAES-VFEEVWRKDESSWGTMMAA 274
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 85/162 (52%), Gaps = 2/162 (1%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+T++WN+ + ++ GQ A++TF++M+ + TF + RA + + A V G
Sbjct: 567 KSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRV-GMS 625
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H IQ G N+++D Y KC I + + F + ++ +VSW +M++ Y +
Sbjct: 626 VHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGL 685
Query: 126 VSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQI 166
S A LF M+ EL+P+SV+ + +L AC + + G +I
Sbjct: 686 ASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/482 (33%), Positives = 268/482 (55%), Gaps = 9/482 (1%)
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
L+ N +LI +++C + + + +H VKS + + ++ Y G E
Sbjct: 30 LDANVSSLIAAVKSCVS---IELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAE 86
Query: 200 LLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE-GHSWNIETLTLVISAFAK 258
LF E+ +RD+ SWN LIS YS G + + +++ M E G N T +ISA
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 259 CGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
G+ +G +H LV+K G ++V + + +++Y K G L S +LF ++ K+ ++ M
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 318 MSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLF 377
+ +QNG + +A F + + +L +C ++G ++L + +HG +M
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM---- 262
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK 437
G GN + T++L++Y + G + + VF + D +AWT+M+ + +HGFG +A+K
Sbjct: 263 FGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIK 322
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLF 497
+F LM+ + + P+ VTF LL+ACSHSGLV EG + +M + I+P LDH++CMVDL
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 498 GRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHT 557
GR G++++A +I +M + P S +WGALL A VY + LG A+RL ELEP + +
Sbjct: 383 GRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYV 442
Query: 558 LLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYA 617
+LSN+ +++G W + +R M +K L + G S IE + F+ GD +HPE+E+I
Sbjct: 443 MLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQK 502
Query: 618 AL 619
L
Sbjct: 503 KL 504
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 168/355 (47%), Gaps = 8/355 (2%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
++ HC ++ + + ++ Y++ CA ++FD M RD+VSW S+I+GY
Sbjct: 51 RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 124 RHVSVACDLFNKM---RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
++ ++ ++M V PN VT + M+ AC G IHG +K GVL +
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVK 170
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V N+ + Y G LF +++ +++ SWN +I + G + N M
Sbjct: 171 VVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRV 229
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDIS 299
GH + T V+ + G + +G+H L++ GFS + + T+LLD Y+K G+L+ S
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+F EI + AM++ + +G +AI F+ M + + +LL+AC++
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
G ++ G+ + K P L + ++++ R G + A + MP++
Sbjct: 350 GLVEEGKHYFETMSKRYRIDP---RLDHYSCMVDLLGRSGLLQDAYGLIKEMPME 401
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 136/316 (43%), Gaps = 19/316 (6%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKM--RQMGVPHDTFTFPVVNRALSSMRAD 59
E + ++WN I + G +M ++G + TF SM +
Sbjct: 91 EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFL-------SMISA 143
Query: 60 AVYG------KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSW 113
VYG + H + ++ G+ ++ N I++Y K + + ++F+ + +++VSW
Sbjct: 144 CVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSW 203
Query: 114 TSMIAGYISERHVSVACDLFN-KMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVK 172
+MI ++ FN RV EP+ T + +L++C + + IHG +
Sbjct: 204 NTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 173 SGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGL 232
G + + ++L +Y+ G E+ +F EI D +W +++ Y+ G R A
Sbjct: 264 GGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHG-FGRDAIK 322
Query: 233 INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ--TSLLDFY 290
E+ G S + T T +++A + G + +G+ + K D L + ++D
Sbjct: 323 HFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLL 382
Query: 291 AKCGKLDISVQLFREI 306
+ G L + L +E+
Sbjct: 383 GRSGLLQDAYGLIKEM 398
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 287/526 (54%), Gaps = 43/526 (8%)
Query: 132 LFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYA 190
LF ++R + L P++ TL V+L++ + G ++HGYAVK+G+ D V NS++ MYA
Sbjct: 33 LFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYA 92
Query: 191 DKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLT 250
G E +F E+ +RDV SWN LIS Y G G+ M ++ T+
Sbjct: 93 SLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIV 152
Query: 251 LVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFK 309
+SA + NL GE ++ V+ T F V + +L+D + KCG LD + +F + K
Sbjct: 153 STLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDK 211
Query: 310 S----------YITLG---------------------AMMSGFIQNGSFMEAIALFQQMQ 338
+ Y++ G AMM+G++Q F EA+ LF+ MQ
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQ 271
Query: 339 AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRG 398
+ + +LL CA GAL+ G+ +HGY+ +N V + + T++++MY +
Sbjct: 272 TAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN----RVTVDKVVGTALVDMYAKC 327
Query: 399 GNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLL 458
G I +A VF + +D +WTS+I G +G AL + M ++ +++TF+++L
Sbjct: 328 GCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVL 387
Query: 459 SACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPD 518
+AC+H G V+EG KI++SM ++P +H +C++DL R G++ EA +I KM D
Sbjct: 388 TACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESD 447
Query: 519 SR---IWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEEL 575
++ +LL+A+ YGN + E A++L ++E ++ HTLL++V ASA RW +V +
Sbjct: 448 ETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNV 507
Query: 576 RREMSEKDLKKKPGWSCIEVKGVSYGFLSGD--ITHPEAEEIYAAL 619
RR+M + ++K PG S IE+ GV + F+ GD ++HP+ +EI + L
Sbjct: 508 RRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 199/436 (45%), Gaps = 38/436 (8%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHC 68
+ +N +++ D F L+ F ++R G+ D FT PVV +++ +R + G+ H
Sbjct: 12 LMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRK-VIEGEKVHG 70
Query: 69 VAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSV 128
A++ GL+ D Y N+++ Y I +VFD M RDVVSW +I+ Y+
Sbjct: 71 YAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED 130
Query: 129 ACDLFNKMRVE--LEPNSVTLIVMLQACCASTPLNVGTQIHGYAV--------------- 171
A +F +M E L+ + T++ L AC A L +G +I+ + V
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVD 190
Query: 172 ---KSGVL----------MDWSVK--NSVLRMYADKGSTEEVELLFSEINKRDVASWNIL 216
K G L D +VK S++ Y G +E +LF +DV W +
Sbjct: 191 MFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAM 250
Query: 217 ISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG 276
++ Y L MQ+ N L +++ A+ G L +G+ +H + +
Sbjct: 251 MNGYVQFNRFDEALELFRCMQTAGIRPDNF-VLVSLLTGCAQTGALEQGKWIHGYINENR 309
Query: 277 FS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQ 335
+ D V+ T+L+D YAKCG ++ ++++F EI + + +++ G NG A+ L+
Sbjct: 310 VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 336 QMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMY 395
+M+ + + + +L AC + G + GR + + M N V+ + ++++
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRKIF-HSMTERHN--VQPKSEHCSCLIDLL 426
Query: 396 IRGGNISSARAVFDRM 411
R G + A + D+M
Sbjct: 427 CRAGLLDEAEELIDKM 442
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 173/410 (42%), Gaps = 72/410 (17%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQ-MGVPHDTFTFPVVNRALSSMRAD 59
+E P + ++WN I ++V G+F A+ FK+M Q + D T A S+++
Sbjct: 105 DEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNL 164
Query: 60 AVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
+ ++ V + ++ + N ++D + KC C+ AR VFD M ++V WTSM+ G
Sbjct: 165 EIGERIYRFVVTE--FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFG 222
Query: 120 YISERHVSVACDLFNKMRVE--------------------------------LEPNSVTL 147
Y+S + A LF + V+ + P++ L
Sbjct: 223 YVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVL 282
Query: 148 IVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINK 207
+ +L C + L G IHGY ++ V +D V +++ MYA G E +F EI +
Sbjct: 283 VSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKE 342
Query: 208 RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
RD ASW LI +M G R L EM+++ G + T V++A G +++G
Sbjct: 343 RDTASWTSLIYGLAMNGMSGRALDLYYEMENV-GVRLDAITFVAVLTACNHGGFVAEGRK 401
Query: 268 V-HCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNG 325
+ H + + S L+D + G LD
Sbjct: 402 IFHSMTERHNVQPKSEHCSCLIDLLCRAGLLD---------------------------- 433
Query: 326 SFMEAIALFQQMQAE-DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
EA L +M+ E D +VP ++ +LL A N G +K+ V L K
Sbjct: 434 ---EAEELIDKMRGESDETLVP-VYCSLLSAARNYGNVKIAERVAEKLEK 479
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/478 (31%), Positives = 263/478 (55%), Gaps = 8/478 (1%)
Query: 149 VMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR 208
+L AC L G ++H + +K+ L ++ +L Y E+ + E+ ++
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 209 DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV 268
+V SW +IS YS G + EM +G N T V+++ + L G+ +
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKP-NEFTFATVLTSCIRASGLGLGKQI 175
Query: 269 HCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSF 327
H L++K + + + +SLLD YAK G++ + ++F + + ++ A+++G+ Q G
Sbjct: 176 HGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLD 235
Query: 328 MEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHM 387
EA+ +F ++ +E + + +LL A + L L G+ H ++++ P L
Sbjct: 236 EEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRREL--PFYAVL-- 291
Query: 388 ETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM-EHR 446
+ S+++MY + GN+S AR +FD MP + I+W +M+ G+ HG G E L+ F LM E R
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKR 351
Query: 447 MQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWG-FGIEPALDHHTCMVDLFGRCGMVKE 505
++P++VT L++LS CSH + G I+ M G +G +P +H+ C+VD+ GR G + E
Sbjct: 352 VKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDE 411
Query: 506 ALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKAS 565
A I +M P + + G+LL A V+ + +GE +RL+E+EP+NAG + +LSN+ AS
Sbjct: 412 AFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYAS 471
Query: 566 AGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLS 623
AGRW +V +R M +K + K+PG S I+ + + F + D THP EE+ A + +S
Sbjct: 472 AGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEIS 529
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/360 (31%), Positives = 176/360 (48%), Gaps = 16/360 (4%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G+ H I+ Y ++ FY KC C+ AR+V D M ++VVSWT+MI+ Y
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQ 130
Query: 123 ERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
H S A +F +M R + +PN T +L +C ++ L +G QIHG VK V
Sbjct: 131 TGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFV 190
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
+S+L MYA G +E +F + +RDV S +I+ Y+ +G + + + S EG
Sbjct: 191 GSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHS-EG 249
Query: 242 HSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISV 300
S N T +++A + L G+ HC V++ VLQ SL+D Y+KCG L +
Sbjct: 250 MSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAR 309
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
+LF + ++ I+ AM+ G+ ++G E + LF+ M+ E V + LL A L
Sbjct: 310 RLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV--TLL---AVLS 364
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETS------ILNMYIRGGNISSARAVFDRMPVK 414
GR+ L N+F+G V G + I++M R G I A RMP K
Sbjct: 365 GCSHGRMEDTGL--NIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 7/259 (2%)
Query: 1 MEEEP-NNTMAWNLTIRTHVDLGQFHSALSTFKK-MRQMGVPHDTFTFPVVNRALSSMRA 58
++E P N ++W I + G AL+ F + MR G P++ FTF V S +RA
Sbjct: 110 LDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNE-FTFATV--LTSCIRA 166
Query: 59 DAV-YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
+ GK H + ++ D ++ ++++D Y K I AR +F+ + RDVVS T++I
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
Query: 118 AGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
AGY A ++F+++ E + PN VT +L A L+ G Q H + ++ +
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
++NS++ MY+ G+ LF + +R SWN ++ YS G V L M
Sbjct: 287 FYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLM 346
Query: 237 QSLEGHSWNIETLTLVISA 255
+ + + TL V+S
Sbjct: 347 RDEKRVKPDAVTLLAVLSG 365
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 3/154 (1%)
Query: 15 IRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMG 74
I + LG AL F ++ G+ + T+ + ALS + A +GK HC ++
Sbjct: 226 IAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGL-ALLDHGKQAHCHVLRRE 284
Query: 75 LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFN 134
L N++ID Y KC + ARR+FD M R +SW +M+ GY +LF
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 135 KMRVE--LEPNSVTLIVMLQACCASTPLNVGTQI 166
MR E ++P++VTL+ +L C + G I
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 378
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 173/562 (30%), Positives = 279/562 (49%), Gaps = 79/562 (14%)
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H I+ D D + +I + A VF + + +V +T+MI G++S
Sbjct: 49 HAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRS 108
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
+ L+++M + P++ + +L+AC L V +IH +K G
Sbjct: 109 ADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGF---------- 154
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
GS+ V L EI Y G+++ + +EM
Sbjct: 155 -------GSSRSVGLKMMEI--------------YGKSGELVNAKKMFDEMPD------- 186
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFRE 305
D V T +++ Y++CG + +++LF++
Sbjct: 187 --------------------------------RDHVAATVMINCYSECGFIKEALELFQD 214
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
+ K + AM+ G ++N +A+ LF++MQ E++ +L AC++LGAL+LG
Sbjct: 215 VKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELG 274
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
R VH ++ N +E + + +++NMY R G+I+ AR VF M KDVI++ +MI G
Sbjct: 275 RWVHSFVE----NQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISG 330
Query: 426 FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEP 485
HG EA+ F M+ +PN VT ++LL+ACSH GL+ G +++ SMK F +EP
Sbjct: 331 LAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEP 390
Query: 486 ALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRL 545
++H+ C+VDL GR G ++EA I + I PD + G LL+A ++GN LGE A+RL
Sbjct: 391 QIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRL 450
Query: 546 LELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSG 605
E E ++G + LLSN+ AS+G+W E E+R M + ++K+PG S IEV + FL G
Sbjct: 451 FESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVG 510
Query: 606 DITHPEAEEIYAALCTLSRVTQ 627
DI HP E IY L L+R+ +
Sbjct: 511 DIAHPHKEAIYQRLQELNRILR 532
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 123/294 (41%), Gaps = 41/294 (13%)
Query: 252 VISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQT-SLLDFYAKCGKLDISVQLFREIHFKS 310
+IS C N++ +H +I+T D L+ + +D + +F + +
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPN 91
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHG 370
AM+ GF+ +G + ++L+ +M ++ + ++L AC LK+ R +H
Sbjct: 92 VYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHA 147
Query: 371 YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP------------------ 412
++K F L M + +Y + G + +A+ +FD MP
Sbjct: 148 QVLKLGFGSSRSVGLKM----MEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 413 -------------VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
+KD + WT+MI+G + +AL+ F M + N T + +LS
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 460 ACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
ACS G + G + +S +E + +++++ RCG + EA + M
Sbjct: 264 ACSDLGALELG-RWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVM 316
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 2/161 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+T+ W I V + + AL F++M+ V + FT V A S + A + G+
Sbjct: 219 DTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALEL-GRWV 277
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H ++L + N +I+ Y +C I ARRVF +M +DV+S+ +MI+G
Sbjct: 278 HSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGAS 337
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQI 166
A + F M PN VTL+ +L AC L++G ++
Sbjct: 338 VEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEV 378
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/509 (30%), Positives = 273/509 (53%), Gaps = 44/509 (8%)
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDV 210
LQ C + L +H + VK G++ + N+++ +Y G+ +F E+ RD
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 211 ASWNILISFYS---MVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
+W +++ + + G + V + L + + ++ A A G++ G
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDF---VFSALVKACANLGSIDHGRQ 126
Query: 268 VHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDIS--------------------------- 299
VHC I + ++ D+V+++SL+D YAKCG L+ +
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGR 186
Query: 300 ----VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIV-PEIWRNLLD 354
++LFR + K+ + A++SGF+Q+G +EA ++F +M+ E + I+ P + +++
Sbjct: 187 KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVG 246
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
ACANL A GR VHG ++ F+ V + ++++MY + ++ +A+ +F RM +
Sbjct: 247 ACANLAASIAGRQVHGLVIALGFDSCV----FISNALIDMYAKCSDVIAAKDIFSRMRHR 302
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
DV++WTS+I G HG +AL ++ M+ H ++PN VTF+ L+ ACSH G V +G +++
Sbjct: 303 DVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELF 362
Query: 475 YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN 534
SM +GI P+L H+TC++DL GR G++ EA ++I M PD W ALL+A G
Sbjct: 363 QSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGR 422
Query: 535 KTLGEYTAQRLL-ELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
+G A L+ + + + LLSN+ ASA W +V E RR++ E +++K PG S +
Sbjct: 423 GQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSV 482
Query: 594 EVKGVSYGFLSGDITHPEAEEIYAALCTL 622
EV+ + F +G+ +HP E+I+ L L
Sbjct: 483 EVRKETEVFYAGETSHPLKEDIFRLLKKL 511
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVP-HDTFTFPVVNRALSSMRADAVYGK 64
N +W I V G+ A S F +MR+ V D + A +++ A ++ G+
Sbjct: 200 KNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAA-SIAGR 258
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H + I +G D ++ N +ID Y KC + A+ +F M HRDVVSWTS+I G
Sbjct: 259 QVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHG 318
Query: 125 HVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
A L++ M ++PN VT + ++ AC +VG G + + D+ ++
Sbjct: 319 QAEKALALYDDMVSHGVKPNEVTFVGLIYACS-----HVGFVEKGRELFQSMTKDYGIRP 373
Query: 184 S------VLRMYADKGSTEEVELLFSEIN-KRDVASWNILIS 218
S +L + G +E E L + D +W L+S
Sbjct: 374 SLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLS 415
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 133/323 (41%), Gaps = 44/323 (13%)
Query: 42 DTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRV 101
D F F + +A +++ +G+ HC I D ++++D Y KC + A+ V
Sbjct: 104 DDFVFSALVKACANL-GSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 102 FDLMLHRDVVSWTSMIAGYISERHVSVACDL----------------------------- 132
FD + ++ +SWT+M++GY A +L
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 133 --FNKMRVE----LEPNSVTLIVMLQACCASTPLNV-GTQIHGYAVKSGVLMDWSVKNSV 185
F +MR E L+P ++ IV CA+ ++ G Q+HG + G + N++
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIV---GACANLAASIAGRQVHGLVIALGFDSCVFISNAL 279
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ MYA + +FS + RDV SW LI + G + L ++M S G N
Sbjct: 280 IDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVS-HGVKPN 338
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ--TSLLDFYAKCGKLDISVQLF 303
T +I A + G + KG + + K LQ T LLD + G LD + L
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 304 REIHF-KSYITLGAMMSGFIQNG 325
+ F T A++S + G
Sbjct: 399 HTMPFPPDEPTWAALLSACKRQG 421
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 191/648 (29%), Positives = 304/648 (46%), Gaps = 76/648 (11%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E P N ++W + + D G+ A+ F +M + V + R +A V
Sbjct: 132 REMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQV 191
Query: 62 YGKMTHCVAIQMGLDLDLYFCN----------------------TMIDFYVKCWCIGCAR 99
+ M + + Y N +M+ Y + + A
Sbjct: 192 FDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAY 251
Query: 100 RVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELE---PNSVTLIVMLQAC-- 154
R+F M R++VSWT+MI+G+ A LF +M+ +++ PN TLI + AC
Sbjct: 252 RLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGG 311
Query: 155 CASTPLNVGTQIHGYAVKSG---VLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVA 211
+G Q+H + +G V D + S++ MYA
Sbjct: 312 LGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYAS-------------------- 351
Query: 212 SWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCL 271
+GLI QSL S+++++ ++I+ + K G+L + E +
Sbjct: 352 ------------------SGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFER 393
Query: 272 VIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAI 331
V D V TS++D Y + G + + LF+++H K +T M+SG +QN F EA
Sbjct: 394 V--KSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAA 451
Query: 332 ALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSI 391
+L M L + + LL + L G+ +H + K + +L ++ S+
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKT--TACYDPDLILQNSL 509
Query: 392 LNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNS 451
++MY + G I A +F +M KD ++W SMI G HG +AL F M++ +PNS
Sbjct: 510 VSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNS 569
Query: 452 VTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIIL 511
VTFL +LSACSHSGL++ G +++ +MK + I+P +DH+ M+DL GR G +KEA I
Sbjct: 570 VTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFIS 629
Query: 512 KMVILPDSRIWGALLAASGV----YGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAG 567
+ PD ++GALL G+ + + E A RLLEL+P NA H L NV A G
Sbjct: 630 ALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLG 689
Query: 568 RWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEI 615
R + +E+R+EM K +KK PG S + V G + FLSGD + EA ++
Sbjct: 690 RHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAAQM 737
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 219/511 (42%), Gaps = 113/511 (22%)
Query: 81 FCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVEL 140
+ +++ Y K + AR +F++M R++V+ +M+ GY+ R ++ A LF E+
Sbjct: 79 YWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFR----EM 134
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
N V+ VML A C D G +E+
Sbjct: 135 PKNVVSWTVMLTALC-----------------------------------DDGRSEDAVE 159
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
LF E+ +R+V SWN L++ GDM + + + M S + SWN +I + +
Sbjct: 160 LFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNA-----MIKGYIEND 214
Query: 261 NLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSG 320
+ E L + V TS++ Y + G + + +LF E+ ++ ++ AM+SG
Sbjct: 215 GM---EEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISG 271
Query: 321 FIQNGSFMEAIALFQQMQAEDLVIVP--EIWRNLLDACANLGA--LKLGRVVHGYLMKNL 376
F N + EA+ LF +M+ + + P E +L AC LG +LG +H ++ N
Sbjct: 272 FAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNG 331
Query: 377 F-----NGPVEGNL-HMETS----------------------ILNMYIRGGNISSARAVF 408
+ +G + +L HM S I+N Y++ G++ A +F
Sbjct: 332 WETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLF 391
Query: 409 DRMP-VKDVIAWTSMIEGF-----GSHGFGF--------------------------EAL 436
+R+ + D ++WTSMI+G+ S FG EA
Sbjct: 392 ERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAA 451
Query: 437 KYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM-KWGFGIEPALDHHTCMVD 495
+ M+ ++P + T+ LLS+ + + +G I+ + K +P L +V
Sbjct: 452 SLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVS 511
Query: 496 LFGRCGMVKEALSIILKMVILPDSRIWGALL 526
++ +CG +++A I KMV D+ W +++
Sbjct: 512 MYAKCGAIEDAYEIFAKMV-QKDTVSWNSMI 541
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 172/637 (27%), Positives = 328/637 (51%), Gaps = 20/637 (3%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P ++++WN I + G+ A F M++ G D ++F + + ++S++
Sbjct: 59 DEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFD 118
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+ G+ H + I+ G + ++Y ++++D Y KC + A F + + VSW ++IAG+
Sbjct: 119 L-GEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
Query: 121 ISERHVSVACDLFN--KMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
+ R + A L +M+ + ++ T +L N+ Q+H +K G+ +
Sbjct: 178 VQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHE 237
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEIN-KRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
++ N+++ YAD GS + + +F + +D+ SWN +I+ +S L +MQ
Sbjct: 238 ITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQ 297
Query: 238 SLEGHSW---NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQT-SLLDFYAK- 292
W +I T T ++SA + + G+ +H +VIK G T +L+ Y +
Sbjct: 298 ----RHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQF 353
Query: 293 -CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
G ++ ++ LF + K I+ ++++GF Q G +A+ F +++ ++ + +
Sbjct: 354 PTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSA 413
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
LL +C++L L+LG+ +H K+ F N + +S++ MY + G I SAR F ++
Sbjct: 414 LLRSCSDLATLQLGQQIHALATKSGF----VSNEFVISSLIVMYSKCGIIESARKCFQQI 469
Query: 412 PVK-DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
K +AW +MI G+ HG G +L F+ M ++ + VTF ++L+ACSH+GL+ EG
Sbjct: 470 SSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG 529
Query: 471 CKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASG 530
++ M+ + I+P ++H+ VDL GR G+V +A +I M + PD + L
Sbjct: 530 LELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCR 589
Query: 531 VYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGW 590
G + A LLE+EP++ + LS++ + +W E +++ M E+ +KK PGW
Sbjct: 590 ACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGW 649
Query: 591 SCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQ 627
S IE++ F + D ++P ++IY + L++ Q
Sbjct: 650 SWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 232/475 (48%), Gaps = 12/475 (2%)
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
+THC AI+ G D+Y N ++D Y+K +G A +FD M RD VSW +MI+GY S
Sbjct: 21 LTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCG 80
Query: 125 HVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
+ A LF M R + + + +L+ + ++G Q+HG +K G + V +
Sbjct: 81 KLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGS 140
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
S++ MYA E+ F EI++ + SWN LI+ + V D+ L+ M+ +
Sbjct: 141 SLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVT 200
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQL 302
+ T +++ + + VH V+K G ++ + +++ YA CG + + ++
Sbjct: 201 MDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRV 260
Query: 303 FREI-HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
F + K I+ +M++GF ++ A LF QMQ + + LL AC+
Sbjct: 261 FDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEH 320
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR--GGNISSARAVFDRMPVKDVIAW 419
G+ +HG ++K +E ++++MYI+ G + A ++F+ + KD+I+W
Sbjct: 321 QIFGKSLHGMVIKK----GLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISW 376
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMK 478
S+I GF G +A+K+F+ + ++ + F +LL +CS + G +I+ + K
Sbjct: 377 NSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATK 436
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
GF + + ++ ++ +CG+++ A ++ + W A++ +G
Sbjct: 437 SGFVSNEFV--ISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/481 (31%), Positives = 266/481 (55%), Gaps = 11/481 (2%)
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
+S T +++ C ++ ++ G I + +G + N ++ MY + LF
Sbjct: 60 DSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLF 119
Query: 203 SEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNL 262
++ +R+V SW +IS YS + L+ M + N+ T + V+ + C +
Sbjct: 120 DQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR-DNVRPNVYTYSSVLRS---CNGM 175
Query: 263 SKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGF 321
S +HC +IK G DV ++++L+D +AK G+ + ++ +F E+ I +++ GF
Sbjct: 176 SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 235
Query: 322 IQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPV 381
QN A+ LF++M+ + ++L AC L L+LG H +++K
Sbjct: 236 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK------Y 289
Query: 382 EGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNL 441
+ +L + ++++MY + G++ A VF++M +DVI W++MI G +G+ EALK F
Sbjct: 290 DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFER 349
Query: 442 MMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCG 501
M +PN +T + +L ACSH+GL+ +G + SMK +GI+P +H+ CM+DL G+ G
Sbjct: 350 MKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAG 409
Query: 502 MVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSN 561
+ +A+ ++ +M PD+ W LL A V N L EY A++++ L+P++AG +TLLSN
Sbjct: 410 KLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSN 469
Query: 562 VKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCT 621
+ A++ +W+ VEE+R M ++ +KK+PG S IEV + F+ GD +HP+ E+ L
Sbjct: 470 IYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQ 529
Query: 622 L 622
L
Sbjct: 530 L 530
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 179/393 (45%), Gaps = 61/393 (15%)
Query: 79 LYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-R 137
++ N +I+ YVK + A ++FD M R+V+SWT+MI+ Y + A +L M R
Sbjct: 96 MFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLR 155
Query: 138 VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEE 197
+ PN T +L++C + + + +H +K G+ D V+++++ ++A G E+
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPED 212
Query: 198 VELLFSEINKRDVASWNILISFYSM---------VGDMMRVAGLINEMQSLEGHSWNIET 248
+F E+ D WN +I ++ + M+ AG I E T
Sbjct: 213 ALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA----------T 262
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHF 308
LT V+ A L G H ++K D +L +L+D Y KCG L+ ++++F ++
Sbjct: 263 LTSVLRACTGLALLELGMQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDALRVFNQMKE 321
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVV 368
+ IT M+SG QNG EA+ LF++M++ +L AC++ G L+ G
Sbjct: 322 RDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGW-- 379
Query: 369 HGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGS 428
Y R S + ++ PV++ + MI+ G
Sbjct: 380 -------------------------YYFR-----SMKKLYGIDPVRE--HYGCMIDLLGK 407
Query: 429 HGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
G +A+K N E +P++VT+ +LL AC
Sbjct: 408 AGKLDDAVKLLN---EMECEPDAVTWRTLLGAC 437
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 12/304 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++W I + AL M + V + +T+ V R+ + M +D +M
Sbjct: 126 NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM-SDV---RML 181
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
HC I+ GL+ D++ + +ID + K A VFD M+ D + W S+I G+
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
VA +LF +M R TL +L+AC L +G Q H + VK D + N++
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNAL 299
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ MY GS E+ +F+++ +RDV +W+ +IS + G L M+S G N
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS-SGTKPN 358
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQT---SLLDFYAKCGKLDISVQL 302
T+ V+ A + G L G + +K + D ++ ++D K GKLD +V+L
Sbjct: 359 YITIVGVLFACSHAGLLEDG-WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKL 417
Query: 303 FREI 306
E+
Sbjct: 418 LNEM 421
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/577 (30%), Positives = 282/577 (48%), Gaps = 71/577 (12%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
D Y N ++ + K + ARR+F+ M +DVV+ S++ GYI + A LF ++
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL- 181
Query: 138 VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV---------LRM 188
+++TL +L+AC L G QIH + GV D + +S+ LRM
Sbjct: 182 -NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRM 240
Query: 189 ----------------------YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDM 226
YA+ G E LF + R V WN +IS Y
Sbjct: 241 ASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMK 300
Query: 227 MRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTS 285
M L NEM++ + TL VI+A G L G+ +HC K G DD V+ ++
Sbjct: 301 MEALVLFNEMRNETRE--DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVAST 358
Query: 286 LLDFYAKCG-------------------------------KLDISVQLFREIHFKSYITL 314
LLD Y+KCG ++D + ++F I KS I+
Sbjct: 359 LLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISW 418
Query: 315 GAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
+M +GF QNG +E + F QM DL +++ ACA++ +L+LG V +
Sbjct: 419 NSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFA---R 475
Query: 375 NLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFE 434
G ++ + + +S++++Y + G + R VFD M D + W SMI G+ ++G GFE
Sbjct: 476 ATIVG-LDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFE 534
Query: 435 ALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMV 494
A+ F M ++P +TF+ +L+AC++ GLV EG K++ SMK G P +H +CMV
Sbjct: 535 AIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMV 594
Query: 495 DLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAG 554
DL R G V+EA++++ +M D +W ++L G K +G+ A++++ELEP+N+
Sbjct: 595 DLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSV 654
Query: 555 YHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
+ LS + A++G W +R+ M E ++ K PG S
Sbjct: 655 AYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSS 691
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 182/427 (42%), Gaps = 85/427 (19%)
Query: 116 MIAGYISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGV 175
MI Y S ++ M V+ V L LQ+C + + Q +G +K G
Sbjct: 1 MILKYNSSYRFYLSSSFLQAMEVDCRRYYVRL---LQSCSSRNRETLWRQTNGLLLKKGF 57
Query: 176 LMDWS-VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLIN 234
L V N +L+MY+ G LF E+ R+ SWN +I Y G+ +
Sbjct: 58 LSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFD 117
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCG 294
M +G+SWN+ V+S FAK G LS
Sbjct: 118 MMPERDGYSWNV-----VVSGFAKAGELS------------------------------- 141
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ-AEDLVIVPEIWRNLL 353
++ +LF + K +TL +++ G+I NG EA+ LF+++ + D + + + L
Sbjct: 142 ---VARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTV----L 194
Query: 354 DACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGN------------- 400
ACA L ALK G+ +H ++ G VE + M +S++N+Y + G+
Sbjct: 195 KACAELEALKCGKQIHAQILI----GGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIRE 250
Query: 401 ------------------ISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
++ +R +FDR + VI W SMI G+ ++ EAL FN
Sbjct: 251 PDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFN-E 309
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGM 502
M + + +S T ++++AC G + G K + FG+ + + ++D++ +CG
Sbjct: 310 MRNETREDSRTLAAVINACIGLGFLETG-KQMHCHACKFGLIDDIVVASTLLDMYSKCGS 368
Query: 503 VKEALSI 509
EA +
Sbjct: 369 PMEACKL 375
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 149/350 (42%), Gaps = 38/350 (10%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN I ++ AL F +MR V+N + + GK HC A
Sbjct: 287 WNSMISGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLET--GKQMHCHA 344
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWC-------------------------------IGCAR 99
+ GL D+ +T++D Y KC I A+
Sbjct: 345 CKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAK 404
Query: 100 RVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCAST 158
RVF+ + ++ ++SW SM G+ + F++M +++L + V+L ++ AC + +
Sbjct: 405 RVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASIS 464
Query: 159 PLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILIS 218
L +G Q+ A G+ D V +S++ +Y G E +F + K D WN +IS
Sbjct: 465 SLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMIS 524
Query: 219 FYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV-HCLVIKTGF 277
Y+ G L +M S+ G T +V++A CG + +G + + + GF
Sbjct: 525 GYATNGQGFEAIDLFKKM-SVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGF 583
Query: 278 SDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITL-GAMMSGFIQNG 325
D S ++D A+ G ++ ++ L E+ F ++ +++ G + NG
Sbjct: 584 VPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 3/204 (1%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E + ++WN G L F +M ++ +P D + V A +S+ + + G
Sbjct: 411 ENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLEL-G 469
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
+ A +GLD D +++ID Y KC + RRVFD M+ D V W SMI+GY +
Sbjct: 470 EQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATN 529
Query: 124 RHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQI-HGYAVKSGVLMDWSV 181
A DLF KM V + P +T +V+L AC + G ++ V G + D
Sbjct: 530 GQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEH 589
Query: 182 KNSVLRMYADKGSTEEVELLFSEI 205
+ ++ + A G EE L E+
Sbjct: 590 FSCMVDLLARAGYVEEAINLVEEM 613
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 107/248 (43%), Gaps = 36/248 (14%)
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
LL +C++ L R +G L+K F + + + +L MY R G + AR +FD M
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSI---VIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMME----------------------HRM-- 447
P ++ +W +MIEG+ + G +L++F++M E R+
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 448 ---QPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF-GIEPALDHHTCMVDLFGRCGMV 503
+ + VT SLL +G E +++ + + I C +CG
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCG-- 206
Query: 504 KEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVK 563
K+ + IL + DS++ +L+ G+ + Y +++ EPD+ L+S
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQI--REPDDHSLSALISGY- 263
Query: 564 ASAGRWNE 571
A+ GR NE
Sbjct: 264 ANCGRVNE 271
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/548 (29%), Positives = 275/548 (50%), Gaps = 54/548 (9%)
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCW-----CIGCARRVFDLMLHRDVVSWTSMIAGYI 121
H + I+ G+D D YF +I + C + ARR+ D + +++ GY
Sbjct: 25 HGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYS 81
Query: 122 S--ERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
E H SVA + + + P+S + +++A L G Q+H A+K G+
Sbjct: 82 ESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHL 141
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
V +++ MY G E +F E+++ ++ +WN +I+ D+ + ++M
Sbjct: 142 FVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVR 201
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDIS 299
SWN+ +L Y K G+L+ +
Sbjct: 202 NHTSWNV---------------------------------------MLAGYIKAGELESA 222
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
++F E+ + ++ M+ G NGSF E+ F+++Q + +L AC+
Sbjct: 223 KRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQS 282
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD-VIA 418
G+ + G+++HG++ K ++ V N ++++MY R GN+ AR VF+ M K +++
Sbjct: 283 GSFEFGKILHGFVEKAGYSWIVSVN----NALIDMYSRCGNVPMARLVFEGMQEKRCIVS 338
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
WTSMI G HG G EA++ FN M + + P+ ++F+SLL ACSH+GL+ EG + MK
Sbjct: 339 WTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMK 398
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
+ IEP ++H+ CMVDL+GR G +++A I +M I P + +W LL A +GN L
Sbjct: 399 RVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELA 458
Query: 539 EYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGV 598
E QRL EL+P+N+G LLSN A+AG+W +V +R+ M + +KK WS +EV
Sbjct: 459 EQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKT 518
Query: 599 SYGFLSGD 606
Y F +G+
Sbjct: 519 MYKFTAGE 526
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 203/431 (47%), Gaps = 48/431 (11%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMG-VPHDTFTFPVVNRALSSMRADAVY 62
EP+ M +N +R + + + H++++ F +M + G V D+F+F V +A+ + R+
Sbjct: 67 EPDAFM-FNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRT- 124
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G HC A++ GL+ L+ T+I Y C C+ AR+VFD M ++V+W ++I
Sbjct: 125 GFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFR 184
Query: 123 ERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
V+ A ++F+KM V N + VML
Sbjct: 185 GNDVAGAREIFDKMLVR---NHTSWNVMLAG----------------------------- 212
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
Y G E + +FSE+ RD SW+ +I + G E+Q G
Sbjct: 213 ------YIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQR-AGM 265
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQ 301
S N +LT V+SA ++ G+ G+ +H V K G+S V + +L+D Y++CG + ++
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 302 LFREIHFKSYI-TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
+F + K I + +M++G +G EA+ LF +M A + + +LL AC++ G
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV-IAW 419
++ G MK +++ +E + ++++Y R G + A +MP+ I W
Sbjct: 386 LIEEGEDYFSE-MKRVYH--IEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVW 442
Query: 420 TSMIEGFGSHG 430
+++ SHG
Sbjct: 443 RTLLGACSSHG 453
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/564 (28%), Positives = 295/564 (52%), Gaps = 17/564 (3%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K H I+ L DL+ +I C A RVF+ + +V S+I +
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 124 RHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
A +F++M R L ++ T +L+AC + L V +H + K G+ D V
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVP 155
Query: 183 NSVLRMYADKGS--TEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
N+++ Y+ G + LF ++++RD SWN ++ G++ L +EM +
Sbjct: 156 NALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD 215
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISV 300
SWN ++ +A+C +SK L K + V ++++ Y+K G ++++
Sbjct: 216 LISWNT-----MLDGYARCREMSKA---FELFEKMPERNTVSWSTMVMGYSKAGDMEMAR 267
Query: 301 QLFREIHF--KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
+F ++ K+ +T +++G+ + G EA L QM A L ++L AC
Sbjct: 268 VMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTE 327
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
G L LG +H L ++ N ++ ++L+MY + GN+ A VF+ +P KD+++
Sbjct: 328 SGLLSLGMRIHSILKRSNLGS----NAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS 383
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
W +M+ G G HG G EA++ F+ M ++P+ VTF+++L +C+H+GL+ EG +YSM+
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSME 443
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
+ + P ++H+ C+VDL GR G +KEA+ ++ M + P+ IWGALL A ++ +
Sbjct: 444 KVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIA 503
Query: 539 EYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGV 598
+ L++L+P + G ++LLSN+ A+A W V ++R +M ++K G S +E++
Sbjct: 504 KEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDG 563
Query: 599 SYGFLSGDITHPEAEEIYAALCTL 622
+ F D +HP++++IY L +L
Sbjct: 564 IHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 210/427 (49%), Gaps = 19/427 (4%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY 62
+EPN + N IR H Q + A F +M++ G+ D FT+P + +A S V
Sbjct: 78 QEPNVHLC-NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVV 136
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGC--ARRVFDLMLHRDVVSWTSMIAGY 120
KM H ++GL D+Y N +ID Y +C +G A ++F+ M RD VSW SM+ G
Sbjct: 137 -KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGL 195
Query: 121 ISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ + A LF++M + + ++ ML ++ ++ + + WS
Sbjct: 196 VKAGELRDARRLFDEMP---QRDLISWNTMLDGYARCREMSKAFELFEKMPERNTV-SWS 251
Query: 181 VKNSVLRMYADKGSTEEVELLFSE--INKRDVASWNILISFYSMVGDMMRVAGLINEMQS 238
+++ Y+ G E ++F + + ++V +W I+I+ Y+ G + L+++M +
Sbjct: 252 ---TMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVA 308
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLD 297
G ++ + +++A + G LS G +H ++ ++ S+ + +LLD YAKCG L
Sbjct: 309 -SGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLK 367
Query: 298 ISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA 357
+ +F +I K ++ M+ G +G EAI LF +M+ E + + +L +C
Sbjct: 368 KAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCN 427
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DV 416
+ G + G + + Y M+ +++ + + ++++ R G + A V MP++ +V
Sbjct: 428 HAGLIDEG-IDYFYSMEKVYD--LVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNV 484
Query: 417 IAWTSMI 423
+ W +++
Sbjct: 485 VIWGALL 491
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 129/294 (43%), Gaps = 41/294 (13%)
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSY 311
+ KC NL++ + +H +I+ +D+ + L+ + C + +++V++F ++ +
Sbjct: 23 LQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
+++ QN +A +F +MQ L + LL AC+ L + +++H +
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 372 LMK-----------------------------NLFNGPVEGNLHMETSILNMYIRGGNIS 402
+ K LF E + S+L ++ G +
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 403 SARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
AR +FD MP +D+I+W +M++G+ +A + F M E N+V++ +++ S
Sbjct: 203 DARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYS 258
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALD--HHTCMVDLFGRCGMVKEALSIILKMV 514
+G + ++ M PA + T ++ + G++KEA ++ +MV
Sbjct: 259 KAGDMEMARVMFDKMPL-----PAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/531 (30%), Positives = 268/531 (50%), Gaps = 53/531 (9%)
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTE--- 196
LE N + LQ C L QIH +K+G++ D L S++
Sbjct: 10 LEHNLYETMSCLQRCSKQEELK---QIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLP 66
Query: 197 EVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM--QSLEGHSWNIETLTLVIS 254
+++F ++ D WN++I +S + R L M S +++ +L
Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSL----- 121
Query: 255 AFAKCGNLSKGE---GVHCLVIKTGFS--------------------------------D 279
C NLS E +H + K G+ D
Sbjct: 122 -LKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD 180
Query: 280 DVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQA 339
DV S++ Y K GK+DI++ LFR++ K+ I+ M+SG++Q EA+ LF +MQ
Sbjct: 181 DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQN 240
Query: 340 EDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGG 399
D+ N L ACA LGAL+ G+ +H YL K + + + +++MY + G
Sbjct: 241 SDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKT----RIRMDSVLGCVLIDMYAKCG 296
Query: 400 NISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
+ A VF + K V AWT++I G+ HG G EA+ F M + ++PN +TF ++L+
Sbjct: 297 EMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLT 356
Query: 460 ACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDS 519
ACS++GLV EG I+YSM+ + ++P ++H+ C+VDL GR G++ EA I +M + P++
Sbjct: 357 ACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNA 416
Query: 520 RIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREM 579
IWGALL A ++ N LGE + L+ ++P + G + +N+ A +W++ E RR M
Sbjct: 417 VIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLM 476
Query: 580 SEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
E+ + K PG S I ++G ++ FL+GD +HPE E+I + + R ++ G
Sbjct: 477 KEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENG 527
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 45/353 (12%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+T WNL IR + +L +++M PH+ +TFP + +A S++ A ++
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQI- 137
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H ++G + D+Y N++I+ Y A +FD + D VSW S+I GY+ +
Sbjct: 138 HAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKM 197
Query: 127 SVACDLFNKM--------------------------------RVELEPNSVTLIVMLQAC 154
+A LF KM ++EP++V+L L AC
Sbjct: 198 DIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSAC 257
Query: 155 CASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWN 214
L G IH Y K+ + MD + ++ MYA G EE +F I K+ V +W
Sbjct: 258 AQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 317
Query: 215 ILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIK 274
LIS Y+ G EMQ + G N+ T T V++A + G + +G+ L+
Sbjct: 318 ALISGYAYHGHGREAISKFMEMQKM-GIKPNVITFTAVLTACSYTGLVEEGK----LIFY 372
Query: 275 TGFSDDVLQTS------LLDFYAKCGKLDISVQLFREIHFK-SYITLGAMMSG 320
+ D L+ + ++D + G LD + + +E+ K + + GA++
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 175/595 (29%), Positives = 289/595 (48%), Gaps = 52/595 (8%)
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + + D + + +I FY + A VFD + R+ S+ +++ Y S
Sbjct: 45 HARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMY 104
Query: 127 SVACDLFNK-------MRVELEPNSVTLIVMLQACCASTPLNVGT---QIHGYAVKSGVL 176
A LF P+S+++ +L+A +G+ Q+HG+ ++ G
Sbjct: 105 FDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFD 164
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
D V N ++ Y + E +F E+++RDV SWN +IS YS G + M
Sbjct: 165 SDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM 224
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSK---GEGVHCLVIKTGFSDDV-LQTSLLDFYAK 292
+ N T VIS F CG S G VH +I+ D+ L +++ FYAK
Sbjct: 225 LACSDFKPNGVT---VISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAK 281
Query: 293 CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDL----VIVPEI 348
CG LD + LF E+ K +T GA++SG++ +G EA+ALF +M++ L ++ +
Sbjct: 282 CGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGL 341
Query: 349 WRN---------------------------LLDACANLGALKLGRVVHGYLMKNLFNGPV 381
+N LL + LK G+ +H + ++N
Sbjct: 342 MQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN----GA 397
Query: 382 EGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNL 441
+ N+++ TSI++ Y + G + A+ VFD + +IAWT++I + HG A F+
Sbjct: 398 DNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQ 457
Query: 442 MMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCG 501
M +P+ VT ++LSA +HSG I+ SM + IEP ++H+ CMV + R G
Sbjct: 458 MQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAG 517
Query: 502 MVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSN 561
+ +A+ I KM I P +++WGALL + V G+ + + RL E+EP+N G +T+++N
Sbjct: 518 KLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMAN 577
Query: 562 VKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIY 616
+ AGRW E E +R +M LKK PG S IE + F++ D + ++E+Y
Sbjct: 578 LYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMY 632
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 193/403 (47%), Gaps = 49/403 (12%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
+ H I+ G D D++ N MI +Y KC I AR+VFD M RDVVSW SMI+GY
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQ 210
Query: 123 ERHVSVACDLFNKMRV--ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
++ M + +PN VT+I + QAC S+ L G ++H +++ + MD S
Sbjct: 211 SGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLS 270
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
+ N+V+ YA GS + LF E++++D ++ +IS Y G + L +EM+S+
Sbjct: 271 LCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG 330
Query: 241 GHSWNIETLTL--------VISAFA---KCG-------------------NLSKGEGVHC 270
+WN L VI++F +CG NL G+ +H
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 271 LVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFME 329
I+ G +++ + TS++D YAK G L + ++F +S I A+++ + +G
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDS 450
Query: 330 AIALFQQMQ-----AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGN 384
A +LF QMQ +D+ + +L A A+ G + + + ++ +E
Sbjct: 451 ACSLFDQMQCLGTKPDDVTLTA-----VLSAFAHSGDSDMAQHIFDSMLTKY---DIEPG 502
Query: 385 LHMETSILNMYIRGGNISSARAVFDRMPVKDVIA--WTSMIEG 425
+ ++++ R G +S A +MP+ D IA W +++ G
Sbjct: 503 VEHYACMVSVLSRAGKLSDAMEFISKMPI-DPIAKVWGALLNG 544
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/444 (24%), Positives = 181/444 (40%), Gaps = 74/444 (16%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMG--VPHDTFTFPVVNRALSSMRAD 59
E + ++WN I + G F +K M P+ V S +D
Sbjct: 192 EMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQS--SD 249
Query: 60 AVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
++G H I+ + +DL CN +I FY KC + AR +FD M +D V++ ++I+G
Sbjct: 250 LIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISG 309
Query: 120 YISERHVSVACDLFNKM--------------------------------RVELEPNSVTL 147
Y++ V A LF++M R PN+VTL
Sbjct: 310 YMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTL 369
Query: 148 IVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINK 207
+L + S+ L G +IH +A+++G + V S++ YA G + +F
Sbjct: 370 SSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKD 429
Query: 208 RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
R + +W +I+ Y++ GD L ++MQ L G + TLT V+SAFA G+ +
Sbjct: 430 RSLIAWTAIITAYAVHGDSDSACSLFDQMQCL-GTKPDDVTLTAVLSAFAHSGDSDMAQH 488
Query: 268 VHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSF 327
+ F + K DI E + Y M+S + G
Sbjct: 489 I--------------------FDSMLTKYDI------EPGVEHY---ACMVSVLSRAGKL 519
Query: 328 MEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHM 387
+A+ +M + + ++W LL+ + LG L++ R + LF E N
Sbjct: 520 SDAMEFISKMPIDP---IAKVWGALLNGASVLGDLEIAR----FACDRLFEMEPE-NTGN 571
Query: 388 ETSILNMYIRGGNISSARAVFDRM 411
T + N+Y + G A V ++M
Sbjct: 572 YTIMANLYTQAGRWEEAEMVRNKM 595
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 200/451 (44%), Gaps = 62/451 (13%)
Query: 159 PLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILIS 218
PL+V Q+H V + D + + ++ Y + + +F EI R+ S+N L+
Sbjct: 38 PLHV-LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLI 96
Query: 219 FYS---MVGDMMR--VAGLINEMQSLEGHSWNIETLTLVISAFAKCGNL---SKGEGVHC 270
Y+ M D ++ + + S + + +++ V+ A + C + S VH
Sbjct: 97 AYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHG 156
Query: 271 LVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFME 329
VI+ GF DV + ++ +Y KC ++ + ++F E+ + ++ +M+SG+ Q+GSF +
Sbjct: 157 FVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFED 216
Query: 330 AIALFQQMQA-EDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
+++ M A D ++ AC L G VH +++N ++ +L +
Sbjct: 217 CKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN----HIQMDLSLC 272
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYF--------- 439
+++ Y + G++ ARA+FD M KD + + ++I G+ +HG EA+ F
Sbjct: 273 NAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLS 332
Query: 440 --NLMMEHRMQ--------------------PNSVTFLSLLSACSHSGLVSEGCKIYYSM 477
N M+ MQ PN+VT SLL + ++S + G +I+
Sbjct: 333 TWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIH--- 389
Query: 478 KWGFGIEPALDHH----TCMVDLFGRCGMVKEALSIILKMVILPDSRI--WGALLAASGV 531
F I D++ T ++D + + G + A + D + W A++ A V
Sbjct: 390 --AFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN---CKDRSLIAWTAIITAYAV 444
Query: 532 YG--NKTLGEYTAQRLLELEPDNAGYHTLLS 560
+G + + + L +PD+ +LS
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDDVTLTAVLS 475
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 124/274 (45%), Gaps = 14/274 (5%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN I + +++F++M + G +T T + +L+ ++ GK H A
Sbjct: 334 WNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLT-YSSNLKGGKEIHAFA 392
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
I+ G D ++Y ++ID Y K + A+RVFD R +++WT++I Y AC
Sbjct: 393 IRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSAC 452
Query: 131 DLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHG-----YAVKSGVLMDWSVKNS 184
LF++M+ + +P+ VTL +L A S ++ I Y ++ GV ++ S
Sbjct: 453 SLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGV-EHYACMVS 511
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVAS-WNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
VL + G + S++ +A W L++ S++GD+ + + +E
Sbjct: 512 VL---SRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPE- 567
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF 277
N T++ + + + G + E V + + G
Sbjct: 568 -NTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGL 600
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 221/359 (61%), Gaps = 10/359 (2%)
Query: 265 GEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQ 323
GE +H +VI++GF + +Q SLL YA CG + + ++F ++ K + ++++GF +
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 324 NGSFMEAIALFQQMQAEDLVIVPEIWR--NLLDACANLGALKLGRVVHGYLMKNLFNGPV 381
NG EA+AL+ +M ++ I P+ + +LL ACA +GAL LG+ VH Y++K +
Sbjct: 67 NGKPEEALALYTEMNSKG--IKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV----GL 120
Query: 382 EGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNL 441
NLH +L++Y R G + A+ +FD M K+ ++WTS+I G +GFG EA++ F
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 442 MMEHR-MQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRC 500
M + P +TF+ +L ACSH G+V EG + + M+ + IEP ++H CMVDL R
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 240
Query: 501 GMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLS 560
G VK+A I M + P+ IW LL A V+G+ L E+ ++L+LEP+++G + LLS
Sbjct: 241 GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLS 300
Query: 561 NVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
N+ AS RW++V+++R++M +KK PG S +EV + FL GD +HP+++ IYA L
Sbjct: 301 NMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKL 359
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 156/303 (51%), Gaps = 9/303 (2%)
Query: 160 LNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISF 219
+ +G IH ++SG V+NS+L +YA+ G +F ++ ++D+ +WN +I+
Sbjct: 4 VRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVING 63
Query: 220 YSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSD 279
++ G L EM S +G + T+ ++SA AK G L+ G+ VH +IK G +
Sbjct: 64 FAENGKPEEALALYTEMNS-KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 122
Query: 280 DVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ 338
++ ++ LLD YA+CG+++ + LF E+ K+ ++ +++ G NG EAI LF+ M+
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 339 AEDLVIVPEI-WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR 397
+ + ++ EI + +L AC++ G +K G Y + +E + ++++ R
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEG---FEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 398 GGNISSARAVFDRMPVK-DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLS 456
G + A MP++ +V+ W +++ HG L F + +++PN
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDS--DLAEFARIQILQLEPNHSGDYV 297
Query: 457 LLS 459
LLS
Sbjct: 298 LLS 300
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 134/304 (44%), Gaps = 33/304 (10%)
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
AD G+ H V I+ G +Y N+++ Y C + A +VFD M +D+V+W S+I
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 118 AGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
G+ A L+ +M + ++P+ T++ +L AC L +G ++H Y +K G+
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
+ N +L +YA G EE + LF E+ ++ SW LI ++ G L M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKL 296
+S EG T ++ A + CG ++K GF Y + +
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCG-----------MVKEGFE-----------YFRRMRE 219
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC 356
+ ++ E HF G M+ + G +A + M + V+ IWR LL AC
Sbjct: 220 EYKIEPRIE-HF------GCMVDLLARAGQVKKAYEYIKSMPMQPNVV---IWRTLLGAC 269
Query: 357 ANLG 360
G
Sbjct: 270 TVHG 273
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+ +AWN I + G+ AL+ + +M G+ D FT + A + + A GK
Sbjct: 52 KDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA-LTLGKR 110
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H I++GL +L+ N ++D Y +C + A+ +FD M+ ++ VSWTS+I G
Sbjct: 111 VHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGF 170
Query: 126 VSVACDLFNKMRVE--LEPNSVTLIVMLQAC 154
A +LF M L P +T + +L AC
Sbjct: 171 GKEAIELFKYMESTEGLLPCEITFVGILYAC 201
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 261 bits (667), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 280/544 (51%), Gaps = 53/544 (9%)
Query: 76 DLDLYF-CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE-RHVSVACDLF 133
D D F N +I V+ I A RVF M ++ ++W S++ G + + A LF
Sbjct: 57 DQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLF 116
Query: 134 NKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKG 193
+++ EP++ + +ML +C Y
Sbjct: 117 DEIP---EPDTFSYNIML-SC----------------------------------YVRNV 138
Query: 194 STEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVI 253
+ E+ + F + +D ASWN +I+ Y+ G+M + L M SWN +I
Sbjct: 139 NFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA-----MI 193
Query: 254 SAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHF-KSYI 312
S + +CG+L K + G V T+++ Y K K++++ +F+++ K+ +
Sbjct: 194 SGYIECGDLEKASHFFKVAPVRGV---VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 313 TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYL 372
T AM+SG+++N + + LF+ M E + + L C+ L AL+LGR +H +
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 373 MKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFG 432
K+ V TS+++MY + G + A +F+ M KDV+AW +MI G+ HG
Sbjct: 311 SKSTLCNDVTA----LTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366
Query: 433 FEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTC 492
+AL F M++++++P+ +TF+++L AC+H+GLV+ G + SM + +EP DH+TC
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTC 426
Query: 493 MVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDN 552
MVDL GR G ++EAL +I M P + ++G LL A V+ N L E+ A++LL+L N
Sbjct: 427 MVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQN 486
Query: 553 AGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEA 612
A + L+N+ AS RW +V +R+ M E ++ K PG+S IE++ + F S D HPE
Sbjct: 487 AAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPEL 546
Query: 613 EEIY 616
+ I+
Sbjct: 547 DSIH 550
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 79/158 (50%), Gaps = 2/158 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N + WN I +V+ + L F+ M + G+ ++ S + A + G+
Sbjct: 248 NLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL-GRQI 306
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + + L D+ ++I Y KC +G A ++F++M +DVV+W +MI+GY +
Sbjct: 307 HQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVG 163
A LF +M ++ P+ +T + +L AC + +N+G
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 162/512 (31%), Positives = 264/512 (51%), Gaps = 56/512 (10%)
Query: 164 TQIHGYAVKSGVLMDWSVKNSVLRMYADKG----STEEVELLFSEINKRDVASWNILISF 219
+QIH +KSG + D +LR A + +F+++ +R+ SWN +I
Sbjct: 40 SQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRG 99
Query: 220 YSMVGD--MMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF 277
+S + + L EM S E N T V+ A AK G + +G+ +H L +K GF
Sbjct: 100 FSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 278 SDD----------------------------------------------VLQTSLLDFYA 291
D VL ++D Y
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
+ G + LF ++ +S ++ M+SG+ NG F +A+ +F++M+ D+ +
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
+L A + LG+L+LG +H Y + + + + +++++MY + G I A VF+R+
Sbjct: 280 VLPAISRLGSLELGEWLHLYAE----DSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERL 335
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
P ++VI W++MI GF HG +A+ F M + ++P+ V +++LL+ACSH GLV EG
Sbjct: 336 PRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGR 395
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGV 531
+ + M G+EP ++H+ CMVDL GR G++ EA IL M I PD IW ALL A +
Sbjct: 396 RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRM 455
Query: 532 YGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
GN +G+ A L+++ P ++G + LSN+ AS G W+EV E+R M EKD++K PG S
Sbjct: 456 QGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCS 515
Query: 592 CIEVKGVSYGFLSGDITHPEAEEIYAALCTLS 623
I++ GV + F+ D +HP+A+EI + L +S
Sbjct: 516 LIDIDGVLHEFVVEDDSHPKAKEINSMLVEIS 547
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 199/433 (45%), Gaps = 58/433 (13%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYI--SERHVSVACDLFNKMRVE--LEPNSVTLIVMLQA 153
A ++F+ M R+ SW ++I G+ E +A LF +M + +EPN T +L+A
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 154 CCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY------------------------ 189
C + + G QIHG A+K G D V ++++RMY
Sbjct: 138 CAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 197
Query: 190 -ADK--------------------GSTEEVELLFSEINKRDVASWNILISFYSMVGDMMR 228
D+ G + +LF ++ +R V SWN +IS YS+ G
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKD 257
Query: 229 VAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLL 287
+ EM+ + N TL V+ A ++ G+L GE +H +G DDVL ++L+
Sbjct: 258 AVEVFREMKKGDIRP-NYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALI 316
Query: 288 DFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE 347
D Y+KCG ++ ++ +F + ++ IT AM++GF +G +AI F +M+ +
Sbjct: 317 DMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDV 376
Query: 348 IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
+ NLL AC++ G ++ GR Y + + +E + ++++ R G + A
Sbjct: 377 AYINLLTACSHGGLVEEGR---RYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF 433
Query: 408 FDRMPVK-DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQP-NSVTFLSLLSACSHSG 465
MP+K D + W +++ G + N++M+ M P +S +++L + + G
Sbjct: 434 ILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMD--MVPHDSGAYVALSNMYASQG 491
Query: 466 LVSEGCKIYYSMK 478
SE ++ MK
Sbjct: 492 NWSEVSEMRLRMK 504
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 153/344 (44%), Gaps = 43/344 (12%)
Query: 76 DLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNK 135
D ++ N MID Y++ AR +FD M R VVSW +MI+GY A ++F +
Sbjct: 205 DGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFRE 264
Query: 136 MRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGS 194
M+ ++ PN VTL+ +L A L +G +H YA SG+ +D + ++++ MY+ G
Sbjct: 265 MKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGI 324
Query: 195 TEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVIS 254
E+ +F + + +V +W+ +I+ +++ G +M+ ++ + L ++
Sbjct: 325 IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINL-LT 383
Query: 255 AFAKCGNLSKGEGVHCLVIKTGFSDDVLQ--TSLLDFYAKCGKLDISVQLFREIHFKSYI 312
A + G + +G ++ + ++ ++D + G LD +
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEA------------- 430
Query: 313 TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYL 372
E L ++ +D+ IW+ LL AC G +++G+ V L
Sbjct: 431 ----------------EEFILNMPIKPDDV-----IWKALLGACRMQGNVEMGKRVANIL 469
Query: 373 MKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
M + P + ++ S NMY GN S + RM KD+
Sbjct: 470 MDMV---PHDSGAYVALS--NMYASQGNWSEVSEMRLRMKEKDI 508
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 2/149 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ ++WN I + G F A+ F++M++ + + T V A+S + G+
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRL-GSLELGEWL 296
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H A G+ +D + +ID Y KC I A VF+ + +V++W++MI G+
Sbjct: 297 HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQA 356
Query: 127 SVACDLFNKMR-VELEPNSVTLIVMLQAC 154
A D F KMR + P+ V I +L AC
Sbjct: 357 GDAIDCFCKMRQAGVRPSDVAYINLLTAC 385
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 178/592 (30%), Positives = 302/592 (51%), Gaps = 53/592 (8%)
Query: 42 DTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRV 101
+ FTFP + ++ + + D V G++ H ++ G +D++ ++ Y+K + A +V
Sbjct: 30 NKFTFPPLLKSCAKL-GDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 102 FDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEP-NSVTLIVMLQACCASTPL 160
D M R + S + ++G + A +F RV NSVT+ +L C +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 161 NVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFY 220
G Q+H A+KSG M+ V S++ MY+ G +F ++ + V ++N IS
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 221 SMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-D 279
G M V + N M+ N T I+A A NL G +H LV+K F +
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 280 DVLQTSLLDFYAKC--------------------------------GKLDISVQLFREIH 307
++ T+L+D Y+KC G+ + +V+LF ++
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 308 FKSY----ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI--WRNLLDACANLGA 361
+ T +++SGF Q G +EA F++M + +V+VP + +LL AC+++
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS--VVMVPSLKCLTSLLSACSDIWT 383
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM--PVKDVIAW 419
LK G+ +HG+++K E ++ + TS+++MY++ G S AR +FDR KD + W
Sbjct: 384 LKNGKEIHGHVIK----AAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFW 439
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKW 479
MI G+G HG A++ F L+ E +++P+ TF ++LSACSH G V +G +I+ M+
Sbjct: 440 NVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQE 499
Query: 480 GFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGE 539
+G +P+ +H CM+DL GR G ++EA +I +M S +LL + + + LGE
Sbjct: 500 EYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGE 558
Query: 540 YTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
A +L ELEP+N +LS++ A+ RW +VE +R+ + +K L K PG S
Sbjct: 559 EAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 208/479 (43%), Gaps = 88/479 (18%)
Query: 142 PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELL 201
PN T +L++C + G +H VK+G +D +++ MY + +
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 202 FSEINKRDVASWNILIS----------FYSMVGDMMRVAGLINEMQSLEGHSWNIETLTL 251
E+ +R +AS N +S + M GD RV+G + M S+
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGD-ARVSG--SGMNSVT----------- 134
Query: 252 VISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKS 310
V S CG++ G +HCL +K+GF +V + TSL+ Y++CG+ ++ ++F ++ KS
Sbjct: 135 VASVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKS 194
Query: 311 YITLGAMMSGFIQNG------SFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKL 364
+T A +SG ++NG S + F + D+ V N + ACA+L L+
Sbjct: 195 VVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFV-----NAITACASLLNLQY 249
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR--------------------------- 397
GR +HG +MK F + + T++++MY +
Sbjct: 250 GRQLHGLVMKKEF----QFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVI 305
Query: 398 -----GGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ 448
G +A +F+++ + D W S+I GF G EA K+F M+ M
Sbjct: 306 SGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV 365
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH----TCMVDLFGRCGMVK 504
P+ SLLSACS + G +I+ G I+ A + T ++D++ +CG+
Sbjct: 366 PSLKCLTSLLSACSDIWTLKNGKEIH-----GHVIKAAAERDIFVLTSLIDMYMKCGLSS 420
Query: 505 EALSIILKMVILP-DSRIWGALLAASGVYG--NKTLGEYTAQRLLELEPDNAGYHTLLS 560
A I + P D W +++ G +G + + R ++EP A + +LS
Sbjct: 421 WARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLS 479
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 173/348 (49%), Gaps = 31/348 (8%)
Query: 228 RVAGLINEMQSLE---GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ- 283
RV+ L+ SL+ HS N T ++ + AK G++ +G +H V+KTGF DV
Sbjct: 10 RVSNLVTGGTSLDVILSHSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTA 69
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
T+L+ Y K ++ ++++ E+ + ++ A +SG ++NG +A +F +
Sbjct: 70 TALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSG 129
Query: 344 IVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
+ ++L C G ++ G +H MK+ F E +++ TS+++MY R G
Sbjct: 130 MNSVTVASVLGGC---GDIEGGMQLHCLAMKSGF----EMEVYVGTSLVSMYSRCGEWVL 182
Query: 404 ARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMME-HRMQPNSVTFLSLLSACS 462
A +F+++P K V+ + + I G +G FNLM + +PN VTF++ ++AC+
Sbjct: 183 AARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA 242
Query: 463 HSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSR- 520
+ G +++ MK F E + T ++D++ +C K A + + L D+R
Sbjct: 243 SLLNLQYGRQLHGLVMKKEFQFETMVG--TALIDMYSKCRCWKSAYIVFTE---LKDTRN 297
Query: 521 --IWGALLAASGVYGNKTLGEYTAQRLLE------LEPDNAGYHTLLS 560
W ++++ + G TA L E L+PD+A +++L+S
Sbjct: 298 LISWNSVISGMMINGQHE----TAVELFEKLDSEGLKPDSATWNSLIS 341
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 282/549 (51%), Gaps = 18/549 (3%)
Query: 85 MIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEPNS 144
MI Y + + A +FD M RDVVSW SMI+G + ++ A LF++M E +
Sbjct: 72 MITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP---ERSV 128
Query: 145 VTLIVMLQACCASTPLNVGTQI-HGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFS 203
V+ M+ C S ++ ++ + VK D + NS++ Y G ++ LF
Sbjct: 129 VSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNSMVHGYLQFGKVDDALKLFK 183
Query: 204 EINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLS 263
++ ++V SW +I L M S + T VI+A A
Sbjct: 184 QMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTS-RPFTCVITACANAPAFH 242
Query: 264 KGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFI 322
G VH L+IK GF ++ + SL+ FYA C ++ S ++F E + A++SG+
Sbjct: 243 MGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS 302
Query: 323 QNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVE 382
N +A+++F M ++ + + L++C+ LG L G+ +HG +K +E
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVK----LGLE 358
Query: 383 GNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
+ + S++ MY GN++ A +VF ++ K +++W S+I G HG G A F M
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG-IEPALDHHTCMVDLFGRCG 501
+ +P+ +TF LLSACSH G + +G K++Y M G I+ + H+TCMVD+ GRCG
Sbjct: 419 IRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCG 478
Query: 502 MVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSN 561
+KEA +I +MV+ P+ +W ALL+A ++ + GE A + L+ ++ + LLSN
Sbjct: 479 KLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSN 538
Query: 562 VKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCT 621
+ ASAGRW+ V +LR +M + + KKPG S + ++G + F SGD P IY L
Sbjct: 539 IYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEF 596
Query: 622 LSRVTQDFG 630
L ++ G
Sbjct: 597 LREKLKELG 605
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 208/484 (42%), Gaps = 69/484 (14%)
Query: 2 EEEP-NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P + ++WN I V+ G ++A+ F +M + V T +VN S + D
Sbjct: 90 DEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWT---AMVNGCFRSGKVD- 145
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+ QM + D N+M+ Y++ + A ++F M ++V+SWT+MI G
Sbjct: 146 ----QAERLFYQMPVK-DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGL 200
Query: 121 ISERHVSVACDLF-NKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
A DLF N +R ++ S ++ AC + ++G Q+HG +K G L +
Sbjct: 201 DQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEE 260
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSM----------VGDMMRV 229
V S++ YA+ + +F E VA W L+S YS+ M+R
Sbjct: 261 YVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRN 320
Query: 230 AGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLD 288
+ L N+ T +++ + G L G+ +H + +K G +D + SL+
Sbjct: 321 SILPNQ-----------STFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVV 369
Query: 289 FYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI 348
Y+ G ++ +V +F +I KS ++ +++ G Q+G A +F QM +
Sbjct: 370 MYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEIT 429
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
+ LL AC++ G L+ GR + Y+ + ++ + T ++++ R G + A +
Sbjct: 430 FTGLLSACSHCGFLEKGRKLFYYMSSGI--NHIDRKIQHYTCMVDILGRCGKLKEAEELI 487
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
+RM VK PN + +L+LLSAC V
Sbjct: 488 ERMVVK----------------------------------PNEMVWLALLSACRMHSDVD 513
Query: 469 EGCK 472
G K
Sbjct: 514 RGEK 517
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 186/427 (43%), Gaps = 44/427 (10%)
Query: 166 IHGYAVKS-GVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG 224
IHG +S V +++ + ++ + +E +F+++ V+ + +I+ Y+
Sbjct: 21 IHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSN 80
Query: 225 DMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLS--------------------- 263
++ L +EM + SWN +IS +CG+++
Sbjct: 81 RLVDALNLFDEMPVRDVVSWNS-----MISGCVECGDMNTAVKLFDEMPERSVVSWTAMV 135
Query: 264 -------KGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGA 316
K + L + D S++ Y + GK+D +++LF+++ K+ I+
Sbjct: 136 NGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTT 195
Query: 317 MMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNL 376
M+ G QN EA+ LF+ M + + ++ ACAN A +G VHG ++K
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLG 255
Query: 377 FNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEAL 436
F ++ S++ Y I +R VFD + V WT+++ G+ + +AL
Sbjct: 256 F----LYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDAL 311
Query: 437 KYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDL 496
F+ M+ + + PN TF S L++CS G + G K + + G+E +V +
Sbjct: 312 SIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG-KEMHGVAVKLGLETDAFVGNSLVVM 370
Query: 497 FGRCGMVKEALSIILKMVILPDSRI-WGALLAASGVYGNKTLGEYTAQRLLEL--EPDNA 553
+ G V +A+S+ +K I S + W +++ +G +++ L EPD
Sbjct: 371 YSDSGNVNDAVSVFIK--IFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEI 428
Query: 554 GYHTLLS 560
+ LLS
Sbjct: 429 TFTGLLS 435
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 258 bits (660), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 150/435 (34%), Positives = 247/435 (56%), Gaps = 22/435 (5%)
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAG---LINEMQSLEGHSWNIETLTLVISAFA 257
+F I WN LI + D+ R L +M S + T V+ A A
Sbjct: 105 VFDSIENHSSFMWNTLIR--ACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACA 162
Query: 258 KCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGA 316
S+G+ VHC ++K GF DV + L+ Y CG LD++ ++F E+ +S ++ +
Sbjct: 163 YIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNS 222
Query: 317 MMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW--RNLLDACANLGALKLGRVVHGYLMK 374
M+ ++ G + A+ LF++MQ P+ + +++L ACA LG+L LG H +L++
Sbjct: 223 MIDALVRFGEYDSALQLFREMQRS---FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLR 279
Query: 375 NLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFE 434
+ V ++ ++ S++ MY + G++ A VF M +D+ +W +MI GF +HG E
Sbjct: 280 KC-DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEE 338
Query: 435 ALKYFNLMMEHR--MQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTC 492
A+ +F+ M++ R ++PNSVTF+ LL AC+H G V++G + + M + IEPAL+H+ C
Sbjct: 339 AMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGC 398
Query: 493 MVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT-LGEYTAQRLLELEPD 551
+VDL R G + EA+ +++ M + PD+ IW +LL A G L E A+ ++ + D
Sbjct: 399 IVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKED 458
Query: 552 N-------AGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLS 604
N +G + LLS V ASA RWN+V +R+ MSE ++K+PG S IE+ G+S+ F +
Sbjct: 459 NESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFA 518
Query: 605 GDITHPEAEEIYAAL 619
GD +HP+ ++IY L
Sbjct: 519 GDTSHPQTKQIYQQL 533
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/366 (28%), Positives = 162/366 (44%), Gaps = 43/366 (11%)
Query: 4 EPNNTMAWNLTIRTHV-DLGQFHSALSTFKKMRQMG-VPHDTFTFPVVNRALSSMRADAV 61
E +++ WN IR D+ + A ++KM + G D TFP V +A + + +
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS- 168
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
GK HC ++ G D+Y N +I Y C C+ AR+VFD M R +VSW SMI +
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 122 SERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKS---GVLMD 178
A LF +M+ EP+ T+ +L AC L++GT H + ++ V MD
Sbjct: 229 RFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM-Q 237
VKNS++ MY GS E +F + KRD+ASWN +I ++ G + M
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQT--SLLDFYAKCGK 295
E N T ++ A G ++KG ++++ + L+ ++D A+ G
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAG- 407
Query: 296 LDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDA 355
YIT EAI + M + + IWR+LLDA
Sbjct: 408 ---------------YIT---------------EAIDMVMSMPMKPDAV---IWRSLLDA 434
Query: 356 CANLGA 361
C GA
Sbjct: 435 CCKKGA 440
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 21/230 (9%)
Query: 2 EEEPNNTM-AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P ++ +WN I V G++ SAL F++M++ P D +T V A + + + +
Sbjct: 210 DEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP-DGYTMQSVLSACAGLGSLS 268
Query: 61 VYGKMTHCVAIQ---MGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
+ G H ++ + + +D+ N++I+ Y KC + A +VF M RD+ SW +MI
Sbjct: 269 L-GTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMI 327
Query: 118 AGYISERHVSVACDLFNKM---RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG 174
G+ + A + F++M R + PNSVT + +L AC +N G Q V+
Sbjct: 328 LGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVR-- 385
Query: 175 VLMDWSVKNS------VLRMYADKGS-TEEVELLFSEINKRDVASWNILI 217
D+ ++ + ++ + A G TE ++++ S K D W L+
Sbjct: 386 ---DYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 160/463 (34%), Positives = 258/463 (55%), Gaps = 20/463 (4%)
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
P+ T + +AC + + G QIHG K G D V+NS++ Y G +
Sbjct: 102 FSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNAC 161
Query: 200 LLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKC 259
+F E+ RDV SW +I+ ++ G ++M N+ T V+ + +
Sbjct: 162 KVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDV----EPNLATYVCVLVSSGRV 217
Query: 260 GNLSKGEGVHCLVIKTGFSDDVLQT--SLLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
G LS G+G+H L++K S L+T +L+D Y KC +L ++++F E+ K ++ +M
Sbjct: 218 GCLSLGKGIHGLILKRA-SLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSM 276
Query: 318 MSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKN 375
+SG + EAI LF MQ I P+ I ++L ACA+LGA+ GR VH Y++
Sbjct: 277 ISGLVHCERSKEAIDLFSLMQTSS-GIKPDGHILTSVLSACASLGAVDHGRWVHEYIL-- 333
Query: 376 LFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEA 435
++ + H+ T+I++MY + G I +A +F+ + K+V W +++ G HG G E+
Sbjct: 334 --TAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLES 391
Query: 436 LKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK-WGFGIEPALDHHTCMV 494
L+YF M++ +PN VTFL+ L+AC H+GLV EG + ++ MK + + P L+H+ CM+
Sbjct: 392 LRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMI 451
Query: 495 DLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRL---LELEPD 551
DL R G++ EAL ++ M + PD RI GA+L+A G TL E + L L++E +
Sbjct: 452 DLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRG--TLMELPKEILDSFLDIEFE 509
Query: 552 NAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIE 594
++G + LLSN+ A+ RW++V +RR M K + K PG S IE
Sbjct: 510 DSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 116/414 (28%), Positives = 194/414 (46%), Gaps = 16/414 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRA---LSSMRADAVYG 63
++ ++N + ++ + + +K G D FTFP V +A S +R G
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIRE----G 125
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K H + +MG D+Y N+++ FY C A +VF M RDVVSWT +I G+
Sbjct: 126 KQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRT 185
Query: 124 RHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
A D F+KM ++EPN T + +L + L++G IHG +K L+ N
Sbjct: 186 GLYKEALDTFSKM--DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
+++ MY + +F E+ K+D SWN +IS L + MQ+ G
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQL 302
+ LT V+SA A G + G VH ++ G D + T+++D YAKCG ++ ++++
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL--LDACANLG 360
F I K+ T A++ G +G +E++ F++M L P + L L+AC + G
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV--KLGFKPNLVTFLAALNACCHTG 421
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
+ GR + +N + L ++++ R G + A + MPVK
Sbjct: 422 LVDEGRRYFHKMKSREYN--LFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVK 473
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 258 bits (660), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 166/571 (29%), Positives = 285/571 (49%), Gaps = 7/571 (1%)
Query: 51 RALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDV 110
+ L S+ + K H I L D + N ++ + + +F ++
Sbjct: 17 KTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNI 76
Query: 111 VSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGY 169
+ S+I G+++ DLF +R L + T ++L+AC ++ +G +H
Sbjct: 77 FLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSL 136
Query: 170 AVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRV 229
VK G D + S+L +Y+ G + LF EI R V +W L S Y+ G
Sbjct: 137 VVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREA 196
Query: 230 AGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLD 288
L +M + G + + V+SA G+L GE + + + + ++T+L++
Sbjct: 197 IDLFKKMVEM-GVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVN 255
Query: 289 FYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI 348
YAKCGK++ + +F + K +T M+ G+ N E I LF QM E+L
Sbjct: 256 LYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFS 315
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
L +CA+LGAL LG + ++ F NL M ++++MY + G ++ VF
Sbjct: 316 IVGFLSSCASLGALDLGEWGISLIDRHEF----LTNLFMANALIDMYAKCGAMARGFEVF 371
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
M KD++ + I G +G + F + + P+ TFL LL C H+GL+
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQ 431
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
+G + + ++ + ++ ++H+ CMVDL+GR GM+ +A +I M + P++ +WGALL+
Sbjct: 432 DGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Query: 529 SGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKP 588
+ + L E + L+ LEP NAG + LSN+ + GRW+E E+R M++K +KK P
Sbjct: 492 CRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIP 551
Query: 589 GWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
G+S IE++G + FL+ D +HP +++IYA L
Sbjct: 552 GYSWIELEGKVHEFLADDKSHPLSDKIYAKL 582
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 207/431 (48%), Gaps = 26/431 (6%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N +N I V+ FH L F +R+ G+ FTFP+V +A + + + G
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKL-GIDL 133
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + ++ G + D+ +++ Y + A ++FD + R VV+WT++ +GY +
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRH 193
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
A DLF KM + ++P+S ++ +L AC L+ G I Y + + + V+ ++
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTL 253
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ +YA G E+ +F + ++D+ +W+ +I Y+ + G+ +Q L+ +
Sbjct: 254 VNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYA--SNSFPKEGIELFLQMLQ-ENLK 310
Query: 246 IETLTLV--ISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQL 302
+ ++V +S+ A G L GE L+ + F ++ + +L+D YAKCG + ++
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEV 370
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLG 360
F+E+ K + + A +SG +NG + A+F Q E L I P+ + LL C + G
Sbjct: 371 FKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG--QTEKLGISPDGSTFLGLLCGCVHAG 428
Query: 361 ALKLGRVVHGYLMKNLFNG-----PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK- 414
++ G FN ++ + +++++ R G + A + MP++
Sbjct: 429 LIQDGL--------RFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRP 480
Query: 415 DVIAWTSMIEG 425
+ I W +++ G
Sbjct: 481 NAIVWGALLSG 491
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 254/468 (54%), Gaps = 12/468 (2%)
Query: 165 QIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL---LFSEINKRDVASWNILISFYS 221
QIH +++ ++ + V + L A ++ +FS+ ++ N +I +S
Sbjct: 29 QIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAFS 88
Query: 222 MVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDD 280
+ L ++ N + + + K G+L G +H + GF SD
Sbjct: 89 LSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDS 148
Query: 281 VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAE 340
+L T+L+D Y+ C + ++F EI + ++ + S +++N + + LF +M+ +
Sbjct: 149 LLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKND 208
Query: 341 -DLVIVPEIWRNLL--DACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR 397
D + P+ LL ACANLGAL G+ VH ++ +N + G L++ ++++MY R
Sbjct: 209 VDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN----GLSGALNLSNTLVSMYSR 264
Query: 398 GGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSL 457
G++ A VF M ++V++WT++I G +GFG EA++ FN M++ + P T L
Sbjct: 265 CGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGL 324
Query: 458 LSACSHSGLVSEGCKIYYSMKWG-FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVIL 516
LSACSHSGLV+EG + M+ G F I+P L H+ C+VDL GR ++ +A S+I M +
Sbjct: 325 LSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMK 384
Query: 517 PDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELR 576
PDS IW LL A V+G+ LGE L+EL+ + AG + LL N ++ G+W +V ELR
Sbjct: 385 PDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELR 444
Query: 577 REMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSR 624
M EK + KPG S IE++G + F+ D++HP EEIY L +++
Sbjct: 445 SLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQ 492
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 152/337 (45%), Gaps = 8/337 (2%)
Query: 100 RVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR--VELEPNSVTLIVMLQACCAS 157
RVF L+ + +MI + + LF +R L N ++ L+ C S
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 158 TPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILI 217
L G QIHG G L D + +++ +Y+ ++ + +F EI KRD SWN+L
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 218 SFYSMVGDMMRVAGLINEMQSLEGHSWNIETLT--LVISAFAKCGNLSKGEGVHCLVIKT 275
S Y V L ++M++ + +T L + A A G L G+ VH + +
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN 246
Query: 276 GFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALF 334
G S + L +L+ Y++CG +D + Q+F + ++ ++ A++SG NG EAI F
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAF 306
Query: 335 QQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNM 394
+M + + LL AC++ G + G + + F ++ NLH ++++
Sbjct: 307 NEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFK--IKPNLHHYGCVVDL 364
Query: 395 YIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGSHG 430
R + A ++ M +K D W +++ HG
Sbjct: 365 LGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHG 401
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 146/323 (45%), Gaps = 40/323 (12%)
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
D + G H G D T++D Y C A +VFD + RD VSW +
Sbjct: 127 GDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLF 186
Query: 118 AGYISERHVSVACDLFNKMRVELE----PNSVTLIVMLQACCASTPLNVGTQIHGYAVKS 173
+ Y+ + LF+KM+ +++ P+ VT ++ LQAC L+ G Q+H + ++
Sbjct: 187 SCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDEN 246
Query: 174 GVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLI 233
G+ ++ N+++ MY+ GS ++ +F + +R+V SW LIS +M G
Sbjct: 247 GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAF 306
Query: 234 NEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKC 293
NEM G S +TLT ++SA + G +++G F D + +
Sbjct: 307 NEMLKF-GISPEEQTLTGLLSACSHSGLVAEG---------MMFFDRM----------RS 346
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRN 351
G+ I L H+ G ++ + +A +L + M+ + P+ IWR
Sbjct: 347 GEFKIKPNLH---HY------GCVVDLLGRARLLDKAYSLIKSMEMK-----PDSTIWRT 392
Query: 352 LLDACANLGALKLGRVVHGYLMK 374
LL AC G ++LG V +L++
Sbjct: 393 LLGACRVHGDVELGERVISHLIE 415
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 274/535 (51%), Gaps = 10/535 (1%)
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
+ H +I G +L + +ID Y+K + AR++FD + RDVVSWT+MI+ +
Sbjct: 33 LIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCG 92
Query: 125 HVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
+ A LF +M R +++ N T +L++C L G QIHG K + V++
Sbjct: 93 YHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRS 152
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
++L +YA G EE L F + +RD+ SWN +I Y+ L M + EG
Sbjct: 153 ALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLT-EGKK 211
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQL 302
+ T ++ A L +H L IK GF L SL++ Y KCG L + +L
Sbjct: 212 PDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKL 271
Query: 303 FREIHFKSYITLGAMMSGFIQ-NGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+ ++ A+++GF Q N +A +F+ M + + ++L C + +
Sbjct: 272 HEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIAS 331
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
+ +GR +HG+ +K+ + ++ + S+++MY + G I A F+ M KDV +WTS
Sbjct: 332 VTIGRQIHGFALKS---SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTS 388
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
+I G+G HG +A+ +N M R++PN VTFLSLLSACSH+G G KIY +M
Sbjct: 389 LIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKH 448
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKM--VILPDSRIWGALLAASGVYGNKTLGE 539
GIE +H +C++D+ R G ++EA ++I ++ S WGA L A +GN L +
Sbjct: 449 GIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSK 508
Query: 540 YTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEK-DLKKKPGWSCI 593
A +LL +EP + L++V A+ G W+ R+ M E K PG+S +
Sbjct: 509 VAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 189/416 (45%), Gaps = 29/416 (6%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ ++W I G AL FK+M + V + FT+ V ++ + G
Sbjct: 77 DVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGC-LKEGMQI 135
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + +L + ++ Y +C + AR FD M RD+VSW +MI GY +
Sbjct: 136 HGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACA 195
Query: 127 SVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
+ LF M E +P+ T +L+A L + +++HG A+K G ++ S+
Sbjct: 196 DTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSL 255
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYS-----------MVGDMMRVAGLIN 234
+ Y GS L KRD+ S LI+ +S + DM+R+ ++
Sbjct: 256 VNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMD 315
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG--FSDDVLQTSLLDFYAK 292
E+ + ++ + + A +++ G +H +K+ D L SL+D YAK
Sbjct: 316 EVV--------VSSMLKICTTIA---SVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAK 364
Query: 293 CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL 352
G+++ +V F E+ K + ++++G+ ++G+F +AI L+ +M+ E + + +L
Sbjct: 365 SGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSL 424
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
L AC++ G +LG ++ ++ +E + I++M R G + A A+
Sbjct: 425 LSACSHTGQTELGWKIYDTMIN---KHGIEAREEHLSCIIDMLARSGYLEEAYALI 477
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 269/542 (49%), Gaps = 37/542 (6%)
Query: 95 IGCARRVFDLMLHRDVVSWT-SMIAGYISERHVSVACDLFNKMRVE--LEPNSVTLIVML 151
IG AR++FD RD + SMI Y+ R + L+ +R E P++ T +
Sbjct: 26 IGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLT 85
Query: 152 QACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVA 211
++C S + G Q+H + G D V V+ MYA G F E+ R
Sbjct: 86 KSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEV 145
Query: 212 SWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG-----E 266
SW LIS Y G++ + L ++M H ++ ++ F K G+++ E
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMP----HVKDVVIYNAMMDGFVKSGDMTSARRLFDE 201
Query: 267 GVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGS 326
H VI T+++ Y +D + +LF + ++ ++ M+ G+ QN
Sbjct: 202 MTHKTVIT--------WTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQ 253
Query: 327 FMEAIALFQQMQA------EDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
E I LFQ+MQA +D+ I+ ++L A ++ GAL LG H ++ + +
Sbjct: 254 PQEGIRLFQEMQATTSLDPDDVTIL-----SVLPAISDTGALSLGEWCHCFVQRKKLDKK 308
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFN 440
V+ + T+IL+MY + G I A+ +FD MP K V +W +MI G+ +G AL F
Sbjct: 309 VK----VCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFV 364
Query: 441 LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRC 500
MM +P+ +T L++++AC+H GLV EG K ++ M+ G+ ++H+ CMVDL GR
Sbjct: 365 TMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMR-EMGLNAKIEHYGCMVDLLGRA 422
Query: 501 GMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLS 560
G +KEA +I M P+ I + L+A G Y + E ++ +ELEP N G + LL
Sbjct: 423 GSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLR 482
Query: 561 NVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALC 620
N+ A+ RW++ ++ M + KK+ G S IE+ + F+SGD THP I+ L
Sbjct: 483 NLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLG 542
Query: 621 TL 622
L
Sbjct: 543 DL 544
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 212/494 (42%), Gaps = 65/494 (13%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMR-QMGVPHDTFTFPVVNRALS-SMRADAV 61
+ +++ N I+ +++ Q+ + + ++ +R + D FTF + ++ S SM V
Sbjct: 38 QRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSM---CV 94
Query: 62 Y-GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
Y G H + G D+Y ++D Y K +GCAR FD M HR VSWT++I+GY
Sbjct: 95 YQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGY 154
Query: 121 ISERHVSVACDLFNKMRVELEPNSVTLIV---MLQACCASTPLNVGTQIHGYAVKSGVLM 177
I + +A LF++M P+ +++ M+ S + ++ V+
Sbjct: 155 IRCGELDLASKLFDQM-----PHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVIT 209
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
W+ +++ Y + + LF + +R++ SWN +I Y L EMQ
Sbjct: 210 -WT---TMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQ 265
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKL 296
+ + T+ V+ A + G LS GE HC V + V + T++LD Y+KCG++
Sbjct: 266 ATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEI 325
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLD 354
+ + ++F E+ K + AM+ G+ NG+ A+ LF M E+ P+ ++
Sbjct: 326 EKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE---KPDEITMLAVIT 382
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
AC + G ++ GR + + N +E ++++ R G++ A + MP
Sbjct: 383 ACNHGGLVEEGRKWFHVMREMGLNAKIEHY----GCMVDLLGRAGSLKEAEDLITNMP-- 436
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
+PN + S LSAC + +I
Sbjct: 437 --------------------------------FEPNGIILSSFLSACGQYKDIERAERI- 463
Query: 475 YSMKWGFGIEPALD 488
+K +EP D
Sbjct: 464 --LKKAVELEPQND 475
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 254 bits (650), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 189/704 (26%), Positives = 325/704 (46%), Gaps = 122/704 (17%)
Query: 40 PHDTFTFPVVNRALSSMR------------ADAVYGKMTHCVAIQMGLDLDLYFCNTMID 87
P+ + NR +++R A AV+G + I G + N +ID
Sbjct: 3 PNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNI-----ITFGFQPRAHILNRLID 57
Query: 88 FYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA------------------ 129
Y K + AR++FD + D ++ T+M++GY + +++A
Sbjct: 58 VYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYN 117
Query: 130 ---------------CDLFNKMRVE-LEPNSVTLIVMLQACC-ASTPLNVGTQIHGYAVK 172
+LF KM+ E +P++ T +L + Q H A+K
Sbjct: 118 AMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALK 177
Query: 173 SGVLMDWSVKNSVLRMYADKGSTEEV----ELLFSEINKRDVASWNILISFYSMVG---- 224
SG SV N+++ +Y+ S+ + +F EI ++D SW +++ Y G
Sbjct: 178 SGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDL 237
Query: 225 ---------DMMR-------VAGLINE---MQSLE--------GHSWNIETLTLVISAFA 257
D M+ ++G +N ++LE G + T VI A A
Sbjct: 238 GEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACA 297
Query: 258 KCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
G L G+ VH V++ SL+ Y KCGK D + +F ++ K ++ A+
Sbjct: 298 TAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNAL 357
Query: 318 MSGFIQNGSFMEAIALFQQMQAED----LVIVPEIWRN---------------------- 351
+SG++ +G EA +F++M+ ++ ++++ + N
Sbjct: 358 LSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCD 417
Query: 352 -----LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARA 406
+ +CA LGA G+ H L+K F+ +L +++ MY + G + AR
Sbjct: 418 YAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDS----SLSAGNALITMYAKCGVVEEARQ 473
Query: 407 VFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGL 466
VF MP D ++W ++I G HG G EA+ + M++ ++P+ +T L++L+ACSH+GL
Sbjct: 474 VFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGL 533
Query: 467 VSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALL 526
V +G K + SM+ + I P DH+ ++DL R G +A S+I + P + IW ALL
Sbjct: 534 VDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALL 593
Query: 527 AASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKK 586
+ V+GN LG A +L L P++ G + LLSN+ A+ G+W EV +R+ M ++ +KK
Sbjct: 594 SGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKK 653
Query: 587 KPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
+ S IE++ + FL D +HPEAE +Y L L + + G
Sbjct: 654 EVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLG 697
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/512 (23%), Positives = 210/512 (41%), Gaps = 77/512 (15%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+T+ +N I +SA++ F KM+ G D FTF V L+ + D
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWC----IGCARRVFDLMLHRDVVSWTSMIAGYIS 122
H A++ G N ++ Y KC + AR+VFD +L +D SWT+M+ GY+
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVK 231
Query: 123 ERHVSVACDLFNKMRVEL---------------------------------EPNSVTLIV 149
+ + +L M + E + T
Sbjct: 232 NGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPS 291
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
+++AC + L +G Q+H Y ++ + NS++ +Y G +E +F ++ +D
Sbjct: 292 VIRACATAGLLQLGKQVHAYVLRREDF-SFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI------------ETLTL------ 251
+ SWN L+S Y G + + EM+ SW I E L L
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 252 ------------VISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDI 298
I + A G G+ H ++K GF + +L+ YAKCG ++
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
+ Q+FR + ++ A+++ Q+G EA+ ++++M + + +L AC++
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH 530
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
G + GR M+ ++ P + + ++++ R G S A +V + +P K
Sbjct: 531 AGLVDQGRKYFDS-METVYRIPPGADHY--ARLIDLLCRSGKFSDAESVIESLPFKPTAE 587
Query: 419 -WTSMIEGFGSHG---FG-FEALKYFNLMMEH 445
W +++ G HG G A K F L+ EH
Sbjct: 588 IWEALLSGCRVHGNMELGIIAADKLFGLIPEH 619
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 265/526 (50%), Gaps = 23/526 (4%)
Query: 85 MIDFYVKC---WCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVEL 140
+IDF C + AR VF+ + V W SMI GY + + A + +M R
Sbjct: 44 LIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGY 103
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
P+ T +L+AC + G+ +HG+ VK+G ++ V +L MY G
Sbjct: 104 SPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLR 163
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+F +I + +V +W LIS + EMQS G N + ++ A +C
Sbjct: 164 VFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQS-NGVKANETIMVDLLVACGRCK 222
Query: 261 NLSKGEGVHCLVIKTGFS---------DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSY 311
++ G+ H + GF + +L TSL+D YAKCG L + LF + ++
Sbjct: 223 DIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTL 282
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVH 369
++ ++++G+ QNG EA+ +F M DL I P+ + +++ A G +LG+ +H
Sbjct: 283 VSWNSIITGYSQNGDAEEALCMFLDML--DLGIAPDKVTFLSVIRASMIQGCSQLGQSIH 340
Query: 370 GYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSH 429
Y+ K F + + +++NMY + G+ SA+ F+ + KD IAWT +I G SH
Sbjct: 341 AYVSKTGF----VKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 430 GFGFEALKYFNLMMEH-RMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALD 488
G G EAL F M E P+ +T+L +L ACSH GLV EG + + M+ G+EP ++
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVE 456
Query: 489 HHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLEL 548
H+ CMVD+ R G +EA ++ M + P+ IWGALL ++ N L + + E
Sbjct: 457 HYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEP 516
Query: 549 EPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIE 594
E +G + LLSN+ A AGRW +V+ +R M K + K G S +E
Sbjct: 517 EELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 206/431 (47%), Gaps = 17/431 (3%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN IR + + AL +++M + G D FTFP V +A S +R D +G H
Sbjct: 75 WNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLR-DIQFGSCVHGFV 133
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
++ G ++++Y ++ Y+ C + RVF+ + +VV+W S+I+G+++ S A
Sbjct: 134 VKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAI 193
Query: 131 DLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYA--------VKSGVLMDWSV 181
+ F +M+ ++ N ++ +L AC + G HG+ +S V + +
Sbjct: 194 EAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGFNVIL 253
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
S++ MYA G LF + +R + SWN +I+ YS GD + +M L G
Sbjct: 254 ATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDL-G 312
Query: 242 HSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISV 300
+ + T VI A G G+ +H V KTGF D + +L++ YAK G + +
Sbjct: 313 IAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAK 372
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI-WRNLLDACANL 359
+ F ++ K I ++ G +G EA+++FQ+MQ + I + +L AC+++
Sbjct: 373 KAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHI 432
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIA 418
G ++ G+ M++L +E + ++++ R G A + MPVK +V
Sbjct: 433 GLVEEGQRYFAE-MRDLHG--LEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNI 489
Query: 419 WTSMIEGFGSH 429
W +++ G H
Sbjct: 490 WGALLNGCDIH 500
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 71/153 (46%), Gaps = 4/153 (2%)
Query: 5 PNNTM-AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
P T+ +WN I + G AL F M +G+ D TF V RA S ++ + G
Sbjct: 278 PERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRA-SMIQGCSQLG 336
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
+ H + G D +++ Y K A++ F+ + +D ++WT +I G S
Sbjct: 337 QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 124 RHVSVACDLFNKMRVE--LEPNSVTLIVMLQAC 154
H + A +F +M+ + P+ +T + +L AC
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYAC 429
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 172/663 (25%), Positives = 318/663 (47%), Gaps = 84/663 (12%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVP-HDTFTFPVVNRALSSMRADA 60
E + +AWN + ++ G + A+ F++M+ G +D+ ++ + S +
Sbjct: 48 EMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQ--VCSNKEGF 105
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR------------ 108
G+ H +++GL+ ++ CN++I Y + + +R+VF+ M R
Sbjct: 106 AEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSY 165
Query: 109 -----------------------DVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNS 144
D+V+W S+++GY S+ A + +M++ L+P++
Sbjct: 166 TKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPST 225
Query: 145 VTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSE 204
++ +LQA L +G IHGY +++ + D V+ +++ MY G ++F
Sbjct: 226 SSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDM 285
Query: 205 INKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSK 264
++ +++ +WN L+S S + L+ M+
Sbjct: 286 MDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEK-------------------------- 319
Query: 265 GEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFK----SYITLGAMMSG 320
EG+ D + SL YA GK + ++ + ++ K + ++ A+ SG
Sbjct: 320 -EGIK--------PDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSG 370
Query: 321 FIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY-LMKNLFNG 379
+NG+F A+ +F +MQ E + LL L L G+ VHG+ L KNL
Sbjct: 371 CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI-- 428
Query: 380 PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYF 439
+ ++ T++++MY + G++ SA +F + K + +W M+ G+ G G E + F
Sbjct: 429 ---CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 440 NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGR 499
++M+E M+P+++TF S+LS C +SGLV EG K + M+ +GI P ++H +CMVDL GR
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 500 CGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLL 559
G + EA I M + PD+ IWGA L++ ++ + L E +RL LEP N+ + ++
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605
Query: 560 SNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
N+ ++ RW +VE +R M ++ + WS I++ + F + THP+ +IY L
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFEL 665
Query: 620 CTL 622
L
Sbjct: 666 YKL 668
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 236/549 (42%), Gaps = 88/549 (16%)
Query: 63 GKMTHCVAIQMGLD-LDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
G H I+ GLD D + + FY +C +G A ++FD M RD ++W ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ A +LF +M+ + T++ +LQ C G QIHGY ++ G+ + S
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ--- 237
+ NS++ MY+ G E +F+ + R+++SWN ++S Y+ +G + GL++EM+
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 238 -------------------------------SLEGHSWNIETLTLVISAFAKCGNLSKGE 266
+ G + +++ ++ A A+ G+L G+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 267 GVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNG 325
+H +++ DV ++T+L+D Y K G L + +F + K+ + +++SG
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 326 SFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNL 385
+A AL +M+ E + W +L A LG + V G MK P
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGK-MKEKGVAP----- 359
Query: 386 HMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH 445
+V++WT++ G +G ALK F M E
Sbjct: 360 -----------------------------NVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 446 RMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPAL--DHH--TCMVDLFGRCG 501
+ PN+ T +LL L+ G +++ GF + L D + T +VD++G+ G
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVH-----GFCLRKNLICDAYVATALVDMYGKSG 445
Query: 502 MVKEALSII--LKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE--LEPDNAGYHT 557
++ A+ I +K L W +L ++G G +LE +EPD + +
Sbjct: 446 DLQSAIEIFWGIKNKSLAS---WNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502
Query: 558 LLSNVKASA 566
+LS K S
Sbjct: 503 VLSVCKNSG 511
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 183/589 (31%), Positives = 288/589 (48%), Gaps = 27/589 (4%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E +T+ WN I + G A F M Q G T +VN + V
Sbjct: 110 EMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATT--LVNLLPFCGQCGFV 167
Query: 62 -YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
G+ H VA + GL+LD N +I FY KC +G A +F M + VSW +MI Y
Sbjct: 168 SQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAY 227
Query: 121 ----ISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
+ E ++V ++F K VE+ P VT+I +L A + PL H VK G++
Sbjct: 228 SQSGLQEEAITVFKNMFEK-NVEISP--VTIINLLSAHVSHEPL------HCLVVKCGMV 278
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
D SV S++ Y+ G E L++ + + ++S Y+ GDM ++
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 237 QSLEGHSWNIETLTLV--ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKC 293
+ L I+ + LV + K ++ G +H IK+G L + L+ Y+K
Sbjct: 339 RQL---CMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKF 395
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW-RNL 352
++ + LF ++ I+ +++SG +Q+G A +F QM ++ I +L
Sbjct: 396 DDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 455
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP 412
L C+ L L LG+ +HGY ++N F E + T++++MY + GN A +VF +
Sbjct: 456 LAGCSQLCCLNLGKELHGYTLRNNF----ENENFVCTALIDMYAKCGNEVQAESVFKSIK 511
Query: 413 VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCK 472
W SMI G+ G AL + M E ++P+ +TFL +LSAC+H G V EG
Sbjct: 512 APCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKI 571
Query: 473 IYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVY 532
+ +M FGI P L H+ MV L GR + EAL +I KM I PDS +WGALL+A ++
Sbjct: 572 CFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIH 631
Query: 533 GNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSE 581
+GEY A+++ L+ N G + L+SN+ A+ W++V +R M +
Sbjct: 632 RELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKD 680
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 142/575 (24%), Positives = 271/575 (47%), Gaps = 52/575 (9%)
Query: 15 IRTHVDLGQFHSALST-------------FKKMRQMGVPHDTFTFPVVNRALSS------ 55
I + DL FHS L + F+ + + + + FT + +A ++
Sbjct: 7 ITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFK 66
Query: 56 MRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTS 115
++ + V +T + GLD +Y ++++ Y+K C+ A+ +FD M RD V W +
Sbjct: 67 LQVEQVQTHLT-----KSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 121
Query: 116 MIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG 174
+I GY + A LF M + P++ TL+ +L C ++ G +HG A KSG
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 175 VLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLIN 234
+ +D VKN+++ Y+ E+LF E+ + SWN +I YS G +
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 241
Query: 235 EMQSLEGHSWNIE----TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDF 289
M N+E T+ ++SA E +HCLV+K G +D+ + TSL+
Sbjct: 242 NM-----FEKNVEISPVTIINLLSAHV------SHEPLHCLVVKCGMVNDISVVTSLVCA 290
Query: 290 YAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW 349
Y++CG L + +L+ S + L +++S + + G A+ F + + + I
Sbjct: 291 YSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVAL 350
Query: 350 RNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFD 409
+L C + +G +HGY +K +G L + ++ MY + ++ + +F+
Sbjct: 351 VGILHGCKKSSHIDIGMSLHGYAIK---SGLCTKTL-VVNGLITMYSKFDDVETVLFLFE 406
Query: 410 RMPVKDVIAWTSMIEGFGSHGFGFEALKYFN-LMMEHRMQPNSVTFLSLLSACSHSGLVS 468
++ +I+W S+I G G A + F+ +M+ + P+++T SLL+ CS ++
Sbjct: 407 QLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLN 466
Query: 469 EGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLA 527
G +++ Y+++ F E + T ++D++ +CG +A S + K + P + W ++++
Sbjct: 467 LGKELHGYTLRNNFENENFV--CTALIDMYAKCGNEVQAES-VFKSIKAPCTATWNSMIS 523
Query: 528 ASGVYG--NKTLGEYTAQRLLELEPDNAGYHTLLS 560
+ G ++ L Y R L+PD + +LS
Sbjct: 524 GYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLS 558
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/503 (32%), Positives = 268/503 (53%), Gaps = 19/503 (3%)
Query: 136 MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADK--- 192
M + P + ++ L +S P + +IH +++G +S KNS+L +
Sbjct: 1 MLAKQTPLTKQMLSELLRASSSKPKQL-KKIHAIVLRTG----FSEKNSLLTQLLENLVV 55
Query: 193 -GSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTL 251
G +F E++K + WN L Y L +M+ L G + T
Sbjct: 56 IGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDL-GVRPDEFTYPF 114
Query: 252 VISAFAKCGNLSKGEGVHCLVIKTGFSD-DVLQTSLLDFYAKCGKLDISVQLFREIHFKS 310
V+ A ++ G+ S G +H V+K GF ++ T L+ Y K G+L + LF + K
Sbjct: 115 VVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKD 174
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHG 370
+ A ++ +Q G+ A+ F +M A+ + ++L AC LG+L++G ++
Sbjct: 175 LVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYD 234
Query: 371 YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHG 430
K ++ N+ +E + L+M+++ GN +AR +F+ M ++V++W++MI G+ +G
Sbjct: 235 RARKE----EIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNG 290
Query: 431 FGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM---KWGFGIEPAL 487
EAL F M ++PN VTFL +LSACSH+GLV+EG K Y+S+ +EP
Sbjct: 291 DSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEG-KRYFSLMVQSNDKNLEPRK 349
Query: 488 DHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE 547
+H+ CMVDL GR G+++EA I KM + PD+ IWGALL A V+ + LG+ A L+E
Sbjct: 350 EHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVE 409
Query: 548 LEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDI 607
PD YH LLSN+ A+AG+W+ V+++R +M + KK +S +E +G + F GD
Sbjct: 410 TAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDK 469
Query: 608 THPEAEEIYAALCTLSRVTQDFG 630
+HP+++ IY L + + + G
Sbjct: 470 SHPQSKAIYEKLDEILKKIRKMG 492
Score = 129 bits (323), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 125/490 (25%), Positives = 223/490 (45%), Gaps = 58/490 (11%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN + +V +L +KKMR +GV D FT+P V +A+S + D G H
Sbjct: 77 WNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQL-GDFSCGFALHAHV 135
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
++ G ++ Y+K + A +F+ M +D+V+W + +A + + ++A
Sbjct: 136 VKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIAL 195
Query: 131 DLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY 189
+ FNKM + ++ +S T++ ML AC L +G +I+ A K + + V+N+ L M+
Sbjct: 196 EYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMH 255
Query: 190 ADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETL 249
G+TE +LF E+ +R+V SW+ +I Y+M GD L MQ+ EG N T
Sbjct: 256 LKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQN-EGLRPNYVTF 314
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFK 309
V+SA + G +++G+ L++++ +D L+ R+ H+
Sbjct: 315 LGVLSACSHAGLVNEGKRYFSLMVQS--NDKNLEP-------------------RKEHYA 353
Query: 310 SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRV 367
+ L ++G EA ++M E P+ IW LL ACA + LG+
Sbjct: 354 CMVDLLG------RSGLLEEAYEFIKKMPVE-----PDTGIWGALLGACAVHRDMILGQK 402
Query: 368 VHGYLMKNLFNGPVEGNLHMETSILNMYIRGGN---ISSARAVFDRMPVKDVIAWTSM-I 423
V L++ P G+ H+ S N+Y G + R+ ++ K V A++S+
Sbjct: 403 VADVLVE---TAPDIGSYHVLLS--NIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEF 457
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSV--TFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
EG + +FN + Q ++ +L G V + C +++ ++
Sbjct: 458 EG---------KIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEME- 507
Query: 482 GIEPALDHHT 491
E +L HH+
Sbjct: 508 EKECSLSHHS 517
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 171/390 (43%), Gaps = 9/390 (2%)
Query: 47 PVVNRALSSM-RADAVYGKM---THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVF 102
P+ + LS + RA + K H + ++ G +++ V + AR+VF
Sbjct: 7 PLTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVF 66
Query: 103 DLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLN 161
D M + W ++ GY+ + + L+ KMR + + P+ T +++A +
Sbjct: 67 DEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFS 126
Query: 162 VGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYS 221
G +H + VK G V ++ MY G E LF + +D+ +WN ++
Sbjct: 127 CGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCV 186
Query: 222 MVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV 281
G+ N+M + + ++ T+ ++SA + G+L GE ++ K ++
Sbjct: 187 QTGNSAIALEYFNKMCA-DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNI 245
Query: 282 L-QTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAE 340
+ + + LD + KCG + + LF E+ ++ ++ M+ G+ NG EA+ LF MQ E
Sbjct: 246 IVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE 305
Query: 341 DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGN 400
L + +L AC++ G + G+ LM + +E ++++ R G
Sbjct: 306 GLRPNYVTFLGVLSACSHAGLVNEGKRYFS-LMVQSNDKNLEPRKEHYACMVDLLGRSGL 364
Query: 401 ISSARAVFDRMPVK-DVIAWTSMIEGFGSH 429
+ A +MPV+ D W +++ H
Sbjct: 365 LEEAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 2/169 (1%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+ +AWN + V G AL F KM V D+FT + A + + + G+
Sbjct: 173 KDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEI-GEE 231
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
+ A + +D ++ N +D ++KC AR +F+ M R+VVSW++MI GY
Sbjct: 232 IYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGD 291
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKS 173
A LF M+ E L PN VT + +L AC + +N G + V+S
Sbjct: 292 SREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 251 bits (642), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 178/609 (29%), Positives = 281/609 (46%), Gaps = 77/609 (12%)
Query: 95 IGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRV-ELEPNSVTLIVMLQA 153
I AR+VFD M D V+W +M+ Y A LF ++R + +P+ + +L
Sbjct: 20 IASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILST 79
Query: 154 CCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGST------------------ 195
C + + G +I ++SG V NS++ MY T
Sbjct: 80 CASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEV 139
Query: 196 ------------EEVEL---LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
E+ E +F E+ KR +WNI+IS ++ G + L EM E
Sbjct: 140 TWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESE 199
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDIS 299
+L+ + A N+ G VH +++K G+S V + S+L FY K G D +
Sbjct: 200 FKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDA 259
Query: 300 VQLFREIHF-------------------------------KSYITLGAMMSGFIQNGSFM 328
++ I K+ +T M++G+ +NG
Sbjct: 260 MRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGE 319
Query: 329 EAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
+A+ F +M + + +L AC+ L L G+++HG L+ F +G ++
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGF----QGYAYVG 375
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ 448
+++N+Y + G+I A F + KD+++W +M+ FG HG +ALK ++ M+ ++
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIK 435
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALS 508
P++VTF+ LL+ CSHSGLV EGC I+ SM + I +DH TCM+D+FGR G + EA
Sbjct: 436 PDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKD 495
Query: 509 IILKMVIL----PDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKA 564
+ L ++ W LL A + + LG ++ L EP LLSN+
Sbjct: 496 LATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYC 555
Query: 565 SAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLS- 623
S GRW E E++RREM E+ +KK PG S IEV F+ GD +HP EE+ L L
Sbjct: 556 STGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEELSETLNCLQH 615
Query: 624 --RVTQDFG 630
R + FG
Sbjct: 616 EMRNPETFG 624
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 199/466 (42%), Gaps = 72/466 (15%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+T+AWN + ++ LG A++ F ++R D ++F + +S+ + +G+
Sbjct: 34 DTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASL-GNVKFGRKI 92
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLML--HRDVVSWTSMIAGYISER 124
+ I+ G L N++ID Y KC A +VF M R+ V+W S++ Y++
Sbjct: 93 QSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAE 152
Query: 125 HVSVACDLFNKM--RV------------------------------ELEPNSVTLIVMLQ 152
A D+F +M RV E +P+ T ++
Sbjct: 153 QFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMN 212
Query: 153 ACCA-STPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGS----------------- 194
AC A S+ + G +H +K+G KNSVL Y GS
Sbjct: 213 ACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQV 272
Query: 195 --------------TEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
TE+ +F ++++ +W +I+ Y GD + EM
Sbjct: 273 SWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMK-S 331
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSD-DVLQTSLLDFYAKCGKLDIS 299
G + V+ A + L G+ +H +I GF + +L++ YAKCG + +
Sbjct: 332 GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEA 391
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+ F +I K ++ M+ F +G +A+ L+ M A + + LL C++
Sbjct: 392 DRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHS 451
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSAR 405
G ++ G ++ ++K+ + P+E + H+ T +++M+ RGG+++ A+
Sbjct: 452 GLVEEGCMIFESMVKD-YRIPLEVD-HV-TCMIDMFGRGGHLAEAK 494
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 90/200 (45%), Gaps = 9/200 (4%)
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ 448
TS + + G I+SAR VFD MP D +AW +M+ + G EA+ F + +
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALS 508
P+ +F ++LS C+ G V G KI S+ G +L + ++D++G+C A
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 509 IILKMVILPDSR---IWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKAS 565
+ M DSR W +LL A Y N E +E+ A ++ + A
Sbjct: 127 VFRDMCC--DSRNEVTWCSLLFA---YMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAH 181
Query: 566 AGRWNEVEELRREMSEKDLK 585
G+ L +EM E + K
Sbjct: 182 CGKLESCLSLFKEMLESEFK 201
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
TS + AK G++ + Q+F + + M++ + + G EAIALF Q++ D
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 344 IVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNG--PVEGNL---------------- 385
+ +L CA+LG +K GR + ++++ F PV +L
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 386 --------HMET---SILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFE 434
E S+L Y+ +A VF MP + AW MI G G
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 435 ALKYFNLMMEHRMQPNSVTFLSLLSACS 462
L F M+E +P+ TF SL++ACS
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACS 215
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 182/606 (30%), Positives = 304/606 (50%), Gaps = 41/606 (6%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E ++ WN I + G +++ F++M ++GV HD F F + D +G
Sbjct: 151 ERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLD--FG 208
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDL--MLHRDVVSWTSMI---A 118
K H + I+ G + N +I Y C + A VF+ + RD V++ +I A
Sbjct: 209 KQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLA 268
Query: 119 GYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQAC-CASTPLNVGTQIHGYAVKSGVL 176
G+ + + V F KM L P +T + ++ +C CA+ +G Q+HG A+K+G
Sbjct: 269 GFKRDESLLV----FRKMLEASLRPTDLTFVSVMGSCSCAA----MGHQVHGLAIKTGYE 320
Query: 177 MDWSVKNSVLRMYA---DKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLI 233
V N+ + MY+ D G+ +V F + ++D+ +WN +IS Y+ +
Sbjct: 321 KYTLVSNATMTMYSSFEDFGAAHKV---FESLEEKDLVTWNTMISSYNQAKLGKSAMSVY 377
Query: 234 NEMQSLEGHSWNIETLTLVI-SAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYA 291
M H ++ S A +L E V +IK G S + + +L+ Y+
Sbjct: 378 KRM-----HIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYS 432
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW-- 349
K G+++ + LF K+ I+ A++SGF NG E + F + ++ I+P+ +
Sbjct: 433 KNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTL 492
Query: 350 RNLLDACANLGALKLGRVVHGYLMKN-LFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
LL C + +L LG H Y++++ F + GN +++NMY + G I ++ VF
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGN-----ALINMYSQCGTIQNSLEVF 547
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM-EHRMQPNSVTFLSLLSACSHSGLV 467
++M KDV++W S+I + HG G A+ + M E ++ P++ TF ++LSACSH+GLV
Sbjct: 548 NQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLV 607
Query: 468 SEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSI--ILKMVILPDSRIWGAL 525
EG +I+ SM G+ +DH +C+VDL GR G + EA S+ I + I +W AL
Sbjct: 608 EEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWAL 667
Query: 526 LAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLK 585
+A +G+ LG+ A+ L+E E D+ + LSN+ A AG W E EE RR ++
Sbjct: 668 FSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAM 727
Query: 586 KKPGWS 591
K+ G S
Sbjct: 728 KQRGCS 733
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 143/600 (23%), Positives = 266/600 (44%), Gaps = 62/600 (10%)
Query: 6 NNTMAWNLTIRTH--VDLGQFHSALSTFKKM-RQMGVPHDTFTFPVVNRALSSMRADAVY 62
N+T NL R G+ +AL F + R + D ++ + +R D ++
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLR-DTIF 75
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFY--------------------VKCWC-------- 94
G HC AI+ GL + NT++ Y V W
Sbjct: 76 GGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFK 135
Query: 95 ---IGCARRVFDLMLHRDVVS-WTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIV 149
I A VFD M RD V+ W +MI G + + +LF +M ++ + +
Sbjct: 136 LGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFAT 195
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSE--INK 207
+L C + L+ G Q+H +K+G + SV N+++ MY + + L+F E +
Sbjct: 196 ILSMCDYGS-LDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAV 254
Query: 208 RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
RD ++N++I + R L+ + LE S LT V S C + G
Sbjct: 255 RDQVTFNVVI---DGLAGFKRDESLLVFRKMLEA-SLRPTDLTFV-SVMGSCSCAAMGHQ 309
Query: 268 VHCLVIKTGFSDDVL-QTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGS 326
VH L IKTG+ L + + Y+ + ++F + K +T M+S + Q
Sbjct: 310 VHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKL 369
Query: 327 FMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLH 386
A++++++M + + +LL +L L++ V ++K + +E
Sbjct: 370 GKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEM---VQACIIKFGLSSKIE---- 422
Query: 387 METSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH- 445
+ ++++ Y + G I A +F+R K++I+W ++I GF +GF FE L+ F+ ++E
Sbjct: 423 ISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Query: 446 -RMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMV 503
R+ P++ T +LLS C + + G + + Y ++ G E + + +++++ +CG +
Sbjct: 483 VRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGN--ALINMYSQCGTI 540
Query: 504 KEALSIILKMVILPDSRIWGALLAASGVYG---NKTLGEYTAQRLLELEPDNAGYHTLLS 560
+ +L + +M D W +L++A +G N T Q ++ PD A + +LS
Sbjct: 541 QNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLS 599
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 160/550 (29%), Positives = 273/550 (49%), Gaps = 53/550 (9%)
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWC---IGCARRVFDLMLHRDVVSWTSMIAGYISERHVS 127
I+ L+ D C M F C + A M +V + ++ G+++ H
Sbjct: 797 IKTSLNQD---CRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPI 853
Query: 128 VACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVL 186
+ +L+ +M R + P+S T +++A ++ Q H + K G ++ +++
Sbjct: 854 RSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIW--KFGFGFHVKIQTTLI 911
Query: 187 RMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
Y+ G E +F E+ +RD +W ++S Y V DM L N+M N
Sbjct: 912 DFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSE-----KNE 966
Query: 247 ETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREI 306
T +I+ + GNL + E LF ++
Sbjct: 967 ATSNCLINGYMGLGNLEQAES----------------------------------LFNQM 992
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
K I+ M+ G+ QN + EAIA+F +M E ++ ++ ACA+LG L++G+
Sbjct: 993 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 1052
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF 426
VH Y ++N F ++++ +++++MY + G++ A VF +P K++ W S+IEG
Sbjct: 1053 EVHMYTLQNGF----VLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGL 1108
Query: 427 GSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPA 486
+HGF EALK F M ++PN+VTF+S+ +AC+H+GLV EG +IY SM + I
Sbjct: 1109 AAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSN 1168
Query: 487 LDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLL 546
++H+ MV LF + G++ EAL +I M P++ IWGALL ++ N + E +L+
Sbjct: 1169 VEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLM 1228
Query: 547 ELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKK-PGWSCIEVKGVSYGFLSG 605
LEP N+GY+ LL ++ A RW +V E+R M E ++K PG S I + + F +
Sbjct: 1229 VLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAA 1288
Query: 606 DITHPEAEEI 615
D +H ++E+
Sbjct: 1289 DKSHSASDEV 1298
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/443 (23%), Positives = 193/443 (43%), Gaps = 48/443 (10%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY 62
+EPN +N + V +L + +M + V ++T+ + +A S + +
Sbjct: 832 QEPN-VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFA---SRF 887
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G+ + G + T+IDFY I AR+VFD M RD ++WT+M++ Y
Sbjct: 888 GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR 947
Query: 123 ERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
+ A L N+M E N T
Sbjct: 948 VLDMDSANSLANQMS---EKNEAT-----------------------------------S 969
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
N ++ Y G+ E+ E LF+++ +D+ SW +I YS + +M EG
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMME-EGI 1028
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQ 301
+ T++ VISA A G L G+ VH ++ GF DV + ++L+D Y+KCG L+ ++
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+F + K+ +++ G +G EA+ +F +M+ E + + ++ AC + G
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWT 420
+ GR ++ ++ + + N+ +++++ + G I A + M + + + W
Sbjct: 1149 VDEGRRIYRSMIDDY---SIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWG 1205
Query: 421 SMIEGFGSHGFGFEALKYFNLMM 443
++++G H A FN +M
Sbjct: 1206 ALLDGCRIHKNLVIAEIAFNKLM 1228
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 123/296 (41%), Gaps = 27/296 (9%)
Query: 258 KCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGA 316
+C E +IKT + D L + +LD++V ++ + A
Sbjct: 782 QCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNA 841
Query: 317 MMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNL 376
+ GF+ + ++ L+ +M + + + +L+ A + A + G + ++ K
Sbjct: 842 LFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASS--FASRFGESLQAHIWKFG 899
Query: 377 FNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEAL 436
F V+ ++T++++ Y G I AR VFD MP +D IAWT+M+ + +
Sbjct: 900 FGFHVK----IQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRR----VLDM 951
Query: 437 KYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALD--HHTCMV 494
N + + N T L++ G + + ++ M P D T M+
Sbjct: 952 DSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM-------PVKDIISWTTMI 1004
Query: 495 DLFGRCGMVKEALSIILKMV---ILPDSRIWGALLAASGVYGNKTLGE----YTAQ 543
+ + +EA+++ KM+ I+PD +++A G +G+ YT Q
Sbjct: 1005 KGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQ 1060
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 286/557 (51%), Gaps = 17/557 (3%)
Query: 47 PVVNRALSSMRA--DAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDL 104
P + ++ +R+ D V H ++ GLD D + + ++ F I A +F+
Sbjct: 26 PQCQKLINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFS-SVLDIRYASSIFEH 84
Query: 105 MLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVG 163
+ + ++ + +MI GY A +FN++R + L + + I L++C +++G
Sbjct: 85 VSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIG 144
Query: 164 TQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR-DVASWNILISFYSM 222
+HG A++SG ++ ++N+++ Y G + +F E+ + D +++ L++ Y
Sbjct: 145 EGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQ 204
Query: 223 VGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV- 281
V L M+ E N+ TL +SA + G+LS E H L IK G D+
Sbjct: 205 VSKKALALDLFRIMRKSE-VVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLH 263
Query: 282 LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAED 341
L T+L+ Y K G + + ++F K +T M+ + + G E + L +QM+ E
Sbjct: 264 LITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEK 323
Query: 342 LVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNI 401
+ + LL +CA A +GR V L + + + + T++++MY + G +
Sbjct: 324 MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEE----RIALDAILGTALVDMYAKVGLL 379
Query: 402 SSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH--RMQPNSVTFLSLLS 459
A +F+RM KDV +WT+MI G+G+HG EA+ FN M E +++PN +TFL +L+
Sbjct: 380 EKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLN 439
Query: 460 ACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDS 519
ACSH GLV EG + + M + P ++H+ C+VDL GR G ++EA +I + I DS
Sbjct: 440 ACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDS 499
Query: 520 RIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREM 579
W ALLAA VYGN LGE RL E+ + LL+ A AG N + L E+
Sbjct: 500 TAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAG--NPEKSLDNEL 557
Query: 580 SEKDLKKKPGWSCIEVK 596
++ +K+ G+S IE++
Sbjct: 558 NKG--RKEAGYSAIEIE 572
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 154/469 (32%), Positives = 255/469 (54%), Gaps = 18/469 (3%)
Query: 167 HGYAVKSGVLMDWSVK------NSVLRMYADKGSTEEVELLFSEI--NKRDVASWNILIS 218
H Y + ++D S K NS++R + E+ + I + D+ N ++
Sbjct: 53 HKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVN 112
Query: 219 F--YSMVGDMMRVAGL-INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT 275
F + G MR GL ++ M G + T +IS +A+ G L + H +
Sbjct: 113 FLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCL---DSCHKVFNSI 169
Query: 276 GFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQ 335
D V +T+++ A+CG + + +LF + + I AM+SG+ Q G EA+ +F
Sbjct: 170 PCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFH 229
Query: 336 QMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMY 395
MQ E + + ++L AC LGAL GR H Y+ +N ++ + + T+++++Y
Sbjct: 230 LMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERN----KIKITVRLATTLVDLY 285
Query: 396 IRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFL 455
+ G++ A VF M K+V W+S + G +GFG + L+ F+LM + + PN+VTF+
Sbjct: 286 AKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFV 345
Query: 456 SLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVI 515
S+L CS G V EG + + SM+ FGIEP L+H+ C+VDL+ R G +++A+SII +M +
Sbjct: 346 SVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
Query: 516 LPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEEL 575
P + +W +LL AS +Y N LG ++++LELE N G + LLSN+ A + W+ V +
Sbjct: 406 KPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHV 465
Query: 576 RREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSR 624
R+ M K ++K+PG S +EV G + F GD +HP+ +I A +SR
Sbjct: 466 RQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISR 514
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 152/345 (44%), Gaps = 40/345 (11%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMG--VPHDTFTFPVVNRALSSMRADAV 61
E A N IR H + ++++ G + D +T + +A + +R
Sbjct: 67 EKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWC----------IGC-------------- 97
G H + I+ G D D + +I Y + C I C
Sbjct: 127 -GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACA 185
Query: 98 -------ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIV 149
AR++F+ M RD ++W +MI+GY A ++F+ M++E ++ N V +I
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
+L AC L+ G H Y ++ + + + +++ +YA G E+ +F + +++
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
V +W+ ++ +M G + L + M+ +G + N T V+ + G + +G+ H
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQ-DGVTPNAVTFVSVLRGCSVVGFVDEGQR-H 363
Query: 270 CLVIKTGFS-DDVLQT--SLLDFYAKCGKLDISVQLFREIHFKSY 311
++ F + L+ L+D YA+ G+L+ +V + +++ K +
Sbjct: 364 FDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPH 408
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 248 bits (633), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 276/533 (51%), Gaps = 44/533 (8%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
GK HC+A+++G DL+ N++++ Y K + A +F M +VVSW MI G+
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 123 ERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
E + + +MR +PN VT I +L AC S + G +I
Sbjct: 328 EYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRI--------------- 372
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
FS I + V++WN ++S YS +MQ +
Sbjct: 373 --------------------FSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ-FQN 411
Query: 242 HSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISV 300
+ TL++++S+ A+ L G+ +H +VI+T S + + + L+ Y++C K++IS
Sbjct: 412 LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISE 471
Query: 301 QLFRE-IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI-WRNLLDACAN 358
+F + I+ +M+SGF N +A+ LF++M ++ E + +L +C+
Sbjct: 472 CIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSR 531
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
L +L GR HG ++K+ G V + +ET++ +MY + G I SAR FD + K+ +
Sbjct: 532 LCSLLHGRQFHGLVVKS---GYVSDSF-VETALTDMYCKCGEIDSARQFFDAVLRKNTVI 587
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
W MI G+G +G G EA+ + M+ +P+ +TF+S+L+ACSHSGLV G +I SM+
Sbjct: 588 WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQ 647
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
GIEP LDH+ C+VD GR G +++A + S +W LL++ V+G+ +L
Sbjct: 648 RIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLA 707
Query: 539 EYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
A++L+ L+P ++ + LLSN +S +W++ L+ M++ + K PG S
Sbjct: 708 RRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 144/571 (25%), Positives = 261/571 (45%), Gaps = 61/571 (10%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ ++WN I V G AL +K+M G FT V A S + D V+G
Sbjct: 102 DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKV-LDGVFGMRC 160
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKC-WCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H VA++ GLD +++ N ++ Y KC + + RVF+ + + VS+T++I G E
Sbjct: 161 HGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENK 220
Query: 126 VSVACDLFNKM-RVELEPNSVTLIVML------QACCASTPL---NVGTQIHGYAVKSGV 175
V A +F M ++ +SV L +L + C + + + +G QIH A++ G
Sbjct: 221 VLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGF 280
Query: 176 LMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINE 235
D + NS+L +YA EL+F+E+ + +V SWNI+I G E
Sbjct: 281 GGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMI------------VGFGQE 328
Query: 236 MQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCG 294
+S + ++E LT + +GF ++V S+L + G
Sbjct: 329 YRSDK----SVEFLTRMRD--------------------SGFQPNEVTCISVLGACFRSG 364
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
++ ++F I S AM+SG+ + EAI+ F+QMQ ++L +L
Sbjct: 365 DVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILS 424
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR-MPV 413
+CA L L+ G+ +HG +++ + N H+ + ++ +Y + + +FD +
Sbjct: 425 SCARLRFLEGGKQIHGVVIRT----EISKNSHIVSGLIAVYSECEKMEISECIFDDCINE 480
Query: 414 KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHR-MQPNSVTFLSLLSACSHSGLVSEGCK 472
D+ W SMI GF + +AL F M + + PN +F ++LS+CS + G +
Sbjct: 481 LDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQ 540
Query: 473 IY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASG- 530
+ +K G+ + ++ T + D++ +CG + A V+ ++ IW ++ G
Sbjct: 541 FHGLVVKSGYVSDSFVE--TALTDMYCKCGEIDSARQ-FFDAVLRKNTVIWNEMIHGYGH 597
Query: 531 -VYGNKTLGEYTAQRLLELEPDNAGYHTLLS 560
G++ +G Y +PD + ++L+
Sbjct: 598 NGRGDEAVGLYRKMISSGEKPDGITFVSVLT 628
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 191/410 (46%), Gaps = 53/410 (12%)
Query: 163 GTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSM 222
G IHG+ V+ G+ D + N +L +Y + G + +F E++ RDV SWN ++F
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 223 VGDMMRVAGLINEMQSLEGHSWNIE------------------------------TLTLV 252
VGD+ + + M + SWN TL V
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKL-DISVQLFREIHFKS 310
+SA +K + G H + +KTG ++ + +LL YAKCG + D V++F + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLL------DACANLGAL-- 362
++ A++ G + +EA+ +F+ M + + + N+L + C +L +
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 363 -KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
+LG+ +H ++ F G+LH+ S+L +Y + +++ A +F MP +V++W
Sbjct: 265 NELGKQIHCLALRLGFG----GDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNI 320
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
MI GFG +++++ M + QPN VT +S+L AC SG V G +I+ S+
Sbjct: 321 MIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP--- 377
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGALLAA 528
+P++ M+ + +EA+S +M + PD +L++
Sbjct: 378 --QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 192/454 (42%), Gaps = 81/454 (17%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKC--------------------W-------C- 94
GK+ H ++MG+ D Y CN ++D Y++C W C
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 95 ---IGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVM 150
+G A VFD M RDVVSW +MI+ + + A ++ +M + P+ TL +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL-LFSEINKRD 209
L AC G + HG AVK+G+ + V N++L MYA G + + +F +++ +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPN 204
Query: 210 VASWNILISFYSMVGDMMRVAGLINEM--QSLEGHSWNIETLTLVISAFAKCGNLSK--- 264
S+ +I + ++ + M + ++ S + + + + C +LS+
Sbjct: 205 EVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYG 264
Query: 265 ---GEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSG 320
G+ +HCL ++ GF D+ L SLL+ YAK ++ + +F E+ + ++ M+ G
Sbjct: 265 NELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVG 324
Query: 321 FIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
F Q +++ +M+ ++L AC
Sbjct: 325 FGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGAC------------------------ 360
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFN 440
R G++ + R +F +P V AW +M+ G+ ++ EA+ F
Sbjct: 361 ---------------FRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFR 405
Query: 441 LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
M ++P+ T +LS+C+ + G +I+
Sbjct: 406 QMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIH 439
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 115/259 (44%), Gaps = 5/259 (1%)
Query: 10 AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCV 69
AWN + + + + A+S F++M+ + D T V+ + + +R GK H V
Sbjct: 383 AWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRF-LEGGKQIHGV 441
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR-DVVSWTSMIAGYISERHVSV 128
I+ + + + + +I Y +C + + +FD ++ D+ W SMI+G+ +
Sbjct: 442 VIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTK 501
Query: 129 ACDLFNKMR--VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVL 186
A LF +M L PN + +L +C L G Q HG VKSG + D V+ ++
Sbjct: 502 ALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALT 561
Query: 187 RMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
MY G + F + +++ WN +I Y G GL +M S G +
Sbjct: 562 DMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMIS-SGEKPDG 620
Query: 247 ETLTLVISAFAKCGNLSKG 265
T V++A + G + G
Sbjct: 621 ITFVSVLTACSHSGLVETG 639
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 241/421 (57%), Gaps = 7/421 (1%)
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+F I+ +N +I Y V NEM G+ + T ++ A +
Sbjct: 88 IFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQ-RGNEPDNFTYPCLLKACTRLK 146
Query: 261 NLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMS 319
++ +G+ +H V K G DV +Q SL++ Y +CG++++S +F ++ K+ + +M+S
Sbjct: 147 SIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVS 206
Query: 320 GFIQNGSFMEAIALFQQMQAEDLVIVPEIWR-NLLDACANLGALKLGRVVHGYLMKNLFN 378
G + E + LF+ M +E + E + L ACAN GAL LG +HG+L++N+
Sbjct: 207 ARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI-- 264
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKY 438
E N+ ++TS+++MY++ G + A +F +M ++ + +++MI G HG G AL+
Sbjct: 265 --SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRM 322
Query: 439 FNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFG 498
F+ M++ ++P+ V ++S+L+ACSHSGLV EG +++ M +EP +H+ C+VDL G
Sbjct: 323 FSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLG 382
Query: 499 RCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTL 558
R G+++EAL I + I + IW L+ V N LG+ AQ LL+L N G + L
Sbjct: 383 RAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLL 442
Query: 559 LSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAA 618
+SN+ + W++V R E++ K LK+ PG+S +E+KG ++ F+S D +HP+ +EIY
Sbjct: 443 ISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKM 502
Query: 619 L 619
L
Sbjct: 503 L 503
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 155/314 (49%), Gaps = 6/314 (1%)
Query: 113 WTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAV 171
+ +MI GY++ A +N+M + EP++ T +L+AC + G QIHG
Sbjct: 100 FNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVF 159
Query: 172 KSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAG 231
K G+ D V+NS++ MY G E +F ++ + ASW+ ++S + +G
Sbjct: 160 KLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLL 219
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT-GFSDDVLQTSLLDFY 290
L M S + + A A G L+ G +H +++ + ++QTSL+D Y
Sbjct: 220 LFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMY 279
Query: 291 AKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR 350
KCG LD ++ +F+++ ++ +T AM+SG +G A+ +F +M E L ++
Sbjct: 280 VKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYV 339
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
++L+AC++ G +K GR V ++K G VE ++++ R G + A
Sbjct: 340 SVLNACSHSGLVKEGRRVFAEMLK---EGKVEPTAEHYGCLVDLLGRAGLLEEALETIQS 396
Query: 411 MPV-KDVIAWTSMI 423
+P+ K+ + W + +
Sbjct: 397 IPIEKNDVIWRTFL 410
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 176/395 (44%), Gaps = 45/395 (11%)
Query: 8 TMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTH 67
T +N IR +V++ F AL + +M Q G D FT+P + +A + +++ GK H
Sbjct: 97 TFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKS-IREGKQIH 155
Query: 68 CVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVS 127
++GL+ D++ N++I+ Y +C + + VF+ + + SW+SM++ S
Sbjct: 156 GQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWS 215
Query: 128 VACDLFNKMRVE--LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
LF M E L+ ++ L AC + LN+G IHG+ +++ ++ V+ S+
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ MY G ++ +F ++ KR+ +++ +IS ++ G+ + ++M EG +
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIK-EGLEPD 334
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ--TSLLDFYAKCGKLDISVQLF 303
V++A + G + +G V ++K G + + L+D + G L+
Sbjct: 335 HVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLE------ 388
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
EA+ Q + E + IWR L C ++
Sbjct: 389 -------------------------EALETIQSIPIEKNDV---IWRTFLSQCRVRQNIE 420
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRG 398
LG++ L+K + P + L I N+Y +G
Sbjct: 421 LGQIAAQELLKLSSHNPGDYLL-----ISNLYSQG 450
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 174/626 (27%), Positives = 318/626 (50%), Gaps = 76/626 (12%)
Query: 50 NRALSSMRA----DAVYGKMTHCVAIQM-GLDLDLYFCNTMIDFYVKCWCIG--C----- 97
+RALS +R+ +V+ + ++Q+ L +Y ++ W IG C
Sbjct: 3 SRALSRLRSYYKRSSVFPSSDNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKI 62
Query: 98 --ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEPNSVTLIVMLQACC 155
AR++FD + RDVV+WT +I GYI + A +LF+ RV+ N VT M+
Sbjct: 63 AEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD--RVDSRKNVVTWTAMVSGYL 120
Query: 156 ASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNI 215
S L++ + + V+ W N+++ YA G ++ LF E+ +R++ SWN
Sbjct: 121 RSKQLSIAEMLFQEMPERNVV-SW---NTMIDGYAQSGRIDKALELFDEMPERNIVSWNS 176
Query: 216 LISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV-HCLVIK 274
++ G + L M + SW T ++ AK G + + + C+ +
Sbjct: 177 MVKALVQRGRIDEAMNLFERMPRRDVVSW-----TAMVDGLAKNGKVDEARRLFDCMPER 231
Query: 275 TGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALF 334
S + + T YA+ ++D + QLF+ + + + + M++GFI+N +A LF
Sbjct: 232 NIISWNAMITG----YAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLF 287
Query: 335 QQMQAEDLV------------------------------IVPEI--WRNLLDACANLGAL 362
+M ++++ + P + + ++L AC++L L
Sbjct: 288 DRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV--KDVIAWT 420
G+ +H + K++ + N + +++LNMY + G + +AR +FD V +D+I+W
Sbjct: 348 VEGQQIHQLISKSVH----QKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWN 403
Query: 421 SMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWG 480
SMI + HG G EA++ +N M +H +P++VT+L+LL ACSH+GLV +G + + +
Sbjct: 404 SMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRD 463
Query: 481 FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI----WGALLAASGVYGNKT 536
+ +H+TC+VDL GR G +K+ + + D+R+ +GA+L+A V+ +
Sbjct: 464 ESLPLREEHYTCLVDLCGRAGRLKD----VTNFINCDDARLSRSFYGAILSACNVHNEVS 519
Query: 537 LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVK 596
+ + +++LE D+AG + L+SN+ A+ G+ E E+R +M EK LKK+PG S ++V
Sbjct: 520 IAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVG 579
Query: 597 GVSYGFLSGDITHPEAEEIYAALCTL 622
++ F+ GD +HP+ E + + L L
Sbjct: 580 KQNHLFVVGDKSHPQFEALDSILSDL 605
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 112/266 (42%), Gaps = 44/266 (16%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++WN ++ V G+ A++ F++M + D ++ + L+ ++
Sbjct: 170 NIVSWNSMVKALVQRGRIDEAMNLFERMPR----RDVVSWTAMVDGLAKNGKVDEARRLF 225
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
C+ + ++ N MI Y + I A ++F +M RD SW +MI G+I R +
Sbjct: 226 DCMP-----ERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREM 280
Query: 127 SVACDLFNKMRVE---------------------------------LEPNSVTLIVMLQA 153
+ AC LF++M + ++PN T + +L A
Sbjct: 281 NKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Query: 154 CCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSE--INKRDVA 211
C L G QIH KS + V +++L MY+ G +F + +RD+
Sbjct: 341 CSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLI 400
Query: 212 SWNILISFYSMVGDMMRVAGLINEMQ 237
SWN +I+ Y+ G + N+M+
Sbjct: 401 SWNSMIAVYAHHGHGKEAIEMYNQMR 426
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 172/649 (26%), Positives = 304/649 (46%), Gaps = 47/649 (7%)
Query: 22 GQFHSALSTFK--KMRQMGVPHDTFTFPVVNRALSS---MRADAVYGKMTHCVAIQMGLD 76
G H A TF +++ D LS+ +RA + G H I G++
Sbjct: 17 GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRA-FLAGVQVHAHCISSGVE 75
Query: 77 LDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM 136
++ FY A+ + + + W +IA Y + +M
Sbjct: 76 YHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRM 135
Query: 137 RVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGST 195
+ + P++ T +L+AC + + G +HG S V N+++ MY +
Sbjct: 136 VSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNM 195
Query: 196 EEVELLFSEINKRDVASWNILISFYS---------------------------------- 221
LF + +RD SWN +I+ Y+
Sbjct: 196 GIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGC 255
Query: 222 -MVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSD- 279
G+ + GLI+ M++ S + + + + A + G + G+ +H L I + +
Sbjct: 256 LQTGNYVGALGLISRMRNFPT-SLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGI 314
Query: 280 DVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQA 339
D ++ +L+ Y+KC L ++ +FR+ S T +++SG+ Q EA L ++M
Sbjct: 315 DNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLV 374
Query: 340 EDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGG 399
++L CA + L+ G+ H Y+++ + + S++++Y + G
Sbjct: 375 AGFQPNSITLASILPLCARIANLQHGKEFHCYILRR---KCFKDYTMLWNSLVDVYAKSG 431
Query: 400 NISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
I +A+ V D M +D + +TS+I+G+G+ G G AL F M ++P+ VT +++LS
Sbjct: 432 KIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLS 491
Query: 460 ACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDS 519
ACSHS LV EG +++ M+ +GI P L H +CMVDL+GR G + +A II M P
Sbjct: 492 ACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSG 551
Query: 520 RIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREM 579
W LL A ++GN +G++ A++LLE++P+N GY+ L++N+ A+AG W+++ E+R M
Sbjct: 552 ATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIM 611
Query: 580 SEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQD 628
+ +KK PG + I+ F GD + PEA Y L L+++ +D
Sbjct: 612 RDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKD 660
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 209/463 (45%), Gaps = 44/463 (9%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ + WN+ I ++ F ++ +K+M G+ D FT+P V +A D +G++
Sbjct: 108 HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGET-LDVAFGRVV 166
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H LY CN +I Y + +G ARR+FD M RD VSW ++I Y SE
Sbjct: 167 HGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMW 226
Query: 127 SVACDLFNKM---------------------------------RVELEPNS---VTLIVM 150
S A +LF+KM R+ P S V +I+
Sbjct: 227 SEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIG 286
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDV 210
L+AC + +G +IHG A+ S +V+N+++ MY+ ++F + + +
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 211 ASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHC 270
+WN +IS Y+ + + L+ EM + G N TL ++ A+ NL G+ HC
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREML-VAGFQPNSITLASILPLCARIANLQHGKEFHC 405
Query: 271 LVIKTG-FSD-DVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
+++ F D +L SL+D YAK GK+ + Q+ + + +T +++ G+ G
Sbjct: 406 YILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGG 465
Query: 329 EAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
A+ALF++M + +L AC++ + G + MK + L
Sbjct: 466 VALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERL---FMKMQCEYGIRPCLQHF 522
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIA-WTSMIEGFGSHG 430
+ ++++Y R G ++ A+ + MP K A W +++ HG
Sbjct: 523 SCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHG 565
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 223/381 (58%), Gaps = 9/381 (2%)
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISV 300
G ++ +T +I + CG L + ++ D + +LL Y K G++D +
Sbjct: 146 GFDSSVHVVTGLIQMYFSCGGLGDARKMFDEML---VKDVNVWNALLAGYGKVGEMDEAR 202
Query: 301 QLFREIH--FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
L + ++ ++ ++SG+ ++G EAI +FQ+M E++ +L ACA+
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
LG+L+LG + Y+ N V N ++++MY + GNI+ A VF+ + ++V+
Sbjct: 263 LGSLELGERICSYVDHRGMNRAVSLN----NAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
WT++I G +HG G EAL FN M++ ++PN VTF+++LSACSH G V G +++ SM+
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
+GI P ++H+ CM+DL GR G ++EA +I M ++ IWG+LLAAS V+ + LG
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438
Query: 539 EYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGV 598
E L++LEP+N+G + LL+N+ ++ GRW+E +R M +KK G S IEV+
Sbjct: 439 ERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
Query: 599 SYGFLSGDITHPEAEEIYAAL 619
Y F+SGD+THP+ E I+ L
Sbjct: 499 VYKFISGDLTHPQVERIHEIL 519
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 191/424 (45%), Gaps = 46/424 (10%)
Query: 7 NTMAWNLTIR--THVDLGQFHS-ALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
NT N IR + +D HS A++ ++K+ + DTFTFP V + ++ +D +G
Sbjct: 77 NTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLK-IAVRVSDVWFG 135
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDV------------- 110
+ H + G D ++ +I Y C +G AR++FD ML +DV
Sbjct: 136 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKV 195
Query: 111 --------------------VSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIV 149
VSWT +I+GY S A ++F +M +E +EP+ VTL+
Sbjct: 196 GEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLA 255
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
+L AC L +G +I Y G+ S+ N+V+ MYA G+ + +F +N+R+
Sbjct: 256 VLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERN 315
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV- 268
V +W +I+ + G + N M G N T ++SA + G + G+ +
Sbjct: 316 VVTWTTIIAGLATHGHGAEALAMFNRMVK-AGVRPNDVTFIAILSACSHVGWVDLGKRLF 374
Query: 269 HCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSF 327
+ + K G ++ ++D + GKL + ++ + + FK+ A+ + +
Sbjct: 375 NSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKAN---AAIWGSLLAASNV 431
Query: 328 MEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHM 387
+ L ++ +E + + P N + ANL + LGR +M+N+ G +
Sbjct: 432 HHDLELGERALSELIKLEPNNSGNYM-LLANLYS-NLGRWDESRMMRNMMKGIGVKKMAG 489
Query: 388 ETSI 391
E+SI
Sbjct: 490 ESSI 493
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/572 (28%), Positives = 273/572 (47%), Gaps = 83/572 (14%)
Query: 53 LSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVS 112
L +++ + K+ + I GL + M+DF K + A R+F+ + + +V
Sbjct: 17 LQRVKSRNEWKKINASIIIH-GLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFL 75
Query: 113 WTSMIAGYISERHVSVACDLF----NKMRVELE-PNSVTLIVMLQACCASTPLNVGTQIH 167
+ S+I Y H S+ CD+ +R E P+ T M ++C + +G Q+H
Sbjct: 76 YNSIIRAYT---HNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVH 132
Query: 168 GYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMM 227
G+ K G + V + N LI Y D++
Sbjct: 133 GHLCKFG-------------------------------PRFHVVTENALIDMYMKFDDLV 161
Query: 228 RVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLL 287
+ +EM + SWN SLL
Sbjct: 162 DAHKVFDEMYERDVISWN---------------------------------------SLL 182
Query: 288 DFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE 347
YA+ G++ + LF + K+ ++ AM+SG+ G ++EA+ F++MQ +
Sbjct: 183 SGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 348 IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
++L +CA LG+L+LG+ +H Y + F + +++ MY + G IS A +
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGF----LKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 408 FDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
F +M KDVI+W++MI G+ HG A++ FN M +++PN +TFL LLSACSH G+
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMW 358
Query: 468 SEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLA 527
EG + + M+ + IEP ++H+ C++D+ R G ++ A+ I M + PDS+IWG+LL+
Sbjct: 359 QEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLS 418
Query: 528 ASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKK 587
+ GN + L+ELEP++ G + LL+N+ A G+W +V LR+ + +++KK
Sbjct: 419 SCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKT 478
Query: 588 PGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
PG S IEV + F+SGD + P EI L
Sbjct: 479 PGGSLIEVNNIVQEFVSGDNSKPFWTEISIVL 510
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 177/389 (45%), Gaps = 46/389 (11%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKM--RQMGVPHDTFTFPVVNRALSSMRADAVYGK 64
N +N IR + + + +K++ + +P D FTFP + ++ +S+ GK
Sbjct: 72 NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP-DRFTFPFMFKSCASL-GSCYLGK 129
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY---- 120
H + G + N +ID Y+K + A +VFD M RDV+SW S+++GY
Sbjct: 130 QVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLG 189
Query: 121 ----------------------ISERHVSVAC-----DLFNKMRVE-LEPNSVTLIVMLQ 152
+ + + C D F +M++ +EP+ ++LI +L
Sbjct: 190 QMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 153 ACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVAS 212
+C L +G IH YA + G L V N+++ MY+ G + LF ++ +DV S
Sbjct: 250 SCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS 309
Query: 213 WNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLV 272
W+ +IS Y+ G+ NEMQ + I L L +SA + G +G ++
Sbjct: 310 WSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGL-LSACSHVGMWQEGLRYFDMM 368
Query: 273 IKTGFSDDVLQ--TSLLDFYAKCGKLDISVQLFREIHFKSYITL-GAMMSGFIQNGSFME 329
+ + ++ L+D A+ GKL+ +V++ + + K + G+++S G+
Sbjct: 369 RQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDV 428
Query: 330 AIALFQ---QMQAEDL---VIVPEIWRNL 352
A+ +++ ED+ V++ I+ +L
Sbjct: 429 ALVAMDHLVELEPEDMGNYVLLANIYADL 457
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 158/536 (29%), Positives = 268/536 (50%), Gaps = 16/536 (2%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI-- 121
K H ++ G+ L+ N ++ Y K A ++FD M R++V+W +I G I
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 122 ----SERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM 177
+ R C L + ++ + V+ + +++ C ST + G Q+H VK G+
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLES 175
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
S++ Y G E +F + RD+ WN L+S Y + G + GL+ M
Sbjct: 176 SCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMG 235
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKL 296
S + + + + T S+ + +G+ +H ++ K + D+ + T+LL+ YAK L
Sbjct: 236 S-DKNRFRGDYFTF--SSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHL 292
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC 356
+ + F + ++ ++ AM+ GF QNG EA+ LF QM E+L + ++L +C
Sbjct: 293 SDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSC 352
Query: 357 ANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV 416
A A+ + V + K G + L + S+++ Y R GN+S A F + D+
Sbjct: 353 AKFSAIWEIKQVQAMVTKK---GSADF-LSVANSLISSYSRNGNLSEALLCFHSIREPDL 408
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
++WTS+I SHGF E+L+ F M++ ++QP+ +TFL +LSACSH GLV EG + +
Sbjct: 409 VSWTSVIGALASHGFAEESLQMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKR 467
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
M + IE +H+TC++DL GR G + EA ++ M P + A ++ +
Sbjct: 468 MTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRE 527
Query: 537 LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELR-REMSEKDLKKKPGWS 591
++ A++LLE+EP +++LSN S G WN+ LR RE K PG S
Sbjct: 528 SMKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCS 583
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 1/148 (0%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++WN I G+ A+ F +M + D TF V + + A ++
Sbjct: 306 NVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQ 365
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
V + D L N++I Y + + A F + D+VSWTS+I S
Sbjct: 366 AMVTKKGSADF-LSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFA 424
Query: 127 SVACDLFNKMRVELEPNSVTLIVMLQAC 154
+ +F M +L+P+ +T + +L AC
Sbjct: 425 EESLQMFESMLQKLQPDKITFLEVLSAC 452
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 152/482 (31%), Positives = 250/482 (51%), Gaps = 13/482 (2%)
Query: 128 VACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVL 186
A L+ +M+ L+P+ T + AC + VG +H K G+ D + +S++
Sbjct: 115 AALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLI 174
Query: 187 RMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
MYA G LF EI +RD SWN +IS YS G L +M+ EG +
Sbjct: 175 MMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEE-EGFEPDE 233
Query: 247 ETLTLVISAFAKCGNLSKGEGVHCLVI--KTGFSDDVLQTSLLDFYAKCGKLDISVQLFR 304
TL ++ A + G+L G + + I K G S L + L+ Y KCG LD + ++F
Sbjct: 234 RTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLST-FLGSKLISMYGKCGDLDSARRVFN 292
Query: 305 EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKL 364
++ K + AM++ + QNG EA LF +M+ + +L AC ++GAL+L
Sbjct: 293 QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALEL 352
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
G+ + + + ++ N+++ T +++MY + G + A VF+ MPVK+ W +MI
Sbjct: 353 GKQIETHASEL----SLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMIT 408
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
+ G EAL F+ M + P+ +TF+ +LSAC H+GLV +GC+ ++ M FG+
Sbjct: 409 AYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLV 465
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
P ++H+T ++DL R GM+ EA + + PD + A+L A + + E +
Sbjct: 466 PKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRM 525
Query: 545 LLEL-EPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFL 603
L+E+ E NAG + + SNV A W+E ++R M ++ + K PG S IE++G FL
Sbjct: 526 LMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFL 585
Query: 604 SG 605
+G
Sbjct: 586 AG 587
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 209/418 (50%), Gaps = 18/418 (4%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFH-SALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
EEPN+ ++N IR + H +ALS +++M+ G+ D FT+ V A + + V
Sbjct: 92 EEPNH-YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGV 150
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
G+ H ++GL+ D++ +++I Y KC +G AR++FD + RD VSW SMI+GY
Sbjct: 151 -GRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYS 209
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ A DLF KM E EP+ TL+ ML AC L G + A+ + +
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
+ + ++ MY G + +F+++ K+D +W +I+ YS G L EM+
Sbjct: 270 LGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKT- 328
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDIS 299
G S + TL+ V+SA G L G+ + + ++ + T L+D Y KCG+++ +
Sbjct: 329 GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEA 388
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ--AEDLVIVPEIWRNLLDACA 357
+++F + K+ T AM++ + G EA+ LF +M D+ + +L AC
Sbjct: 389 LRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFI-----GVLSACV 443
Query: 358 NLGALKLG-RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
+ G + G R H M ++F G V H T+I+++ R G + A +R P K
Sbjct: 444 HAGLVHQGCRYFHE--MSSMF-GLVPKIEHY-TNIIDLLSRAGMLDEAWEFMERFPGK 497
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 241 bits (616), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 166/540 (30%), Positives = 262/540 (48%), Gaps = 31/540 (5%)
Query: 63 GKMTHCVAIQMGLD-LDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
G+ H ++M + L N++ID Y KC A +F HRD+VSW SMI+ +
Sbjct: 412 GRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFS 471
Query: 122 SERHVSVACDLFNKMRVELEPNSV---TLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
A +LF ++ E + T++ +L +C +S L G +H + K G L
Sbjct: 472 QNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDL-- 529
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQS 238
++ LR+ SE RD+ SWN +IS + G + M
Sbjct: 530 ---TSAFLRLET-----------MSET--RDLTSWNSVISGCASSGHHLESLRAFQAMSR 573
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLD 297
++ TL ISA G + +G H L IK+ D LQ +L+ Y +C ++
Sbjct: 574 EGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIE 633
Query: 298 ISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA 357
+V++F I + + ++S QN + E LF+ ++ E I + LL A
Sbjct: 634 SAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLKLEPNEIT---FVGLLSAST 690
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVI 417
LG+ G H +L++ F + N + ++++MY G + + VF V +
Sbjct: 691 QLGSTSYGMQAHCHLIRRGF----QANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSIS 746
Query: 418 AWTSMIEGFGSHGFGFEALKYFN-LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
AW S+I G HG G +A++ F L M+PN +F+SLLSACSHSG + EG Y
Sbjct: 747 AWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQ 806
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
M+ FG++P +H +VD+ GR G ++EA I + + +WGALL+A +G+
Sbjct: 807 MEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTK 866
Query: 537 LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVK 596
LG+ A+ L E+EPDNA Y+ L+N G W E LR+ + + LKK PG+S I+V+
Sbjct: 867 LGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 159/576 (27%), Positives = 275/576 (47%), Gaps = 52/576 (9%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E + + + WN I G++ +A+ F +M G D+ T + ALSS+
Sbjct: 147 ELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSR- 205
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
M HC+AI+ GL D CN +++ Y K + A VF M HRD+VSW +++ +
Sbjct: 206 KCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCL 265
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW- 179
+ H + F M E ++VT ++ AC + L +G +HG +KSG +
Sbjct: 266 ANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAH 325
Query: 180 -SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQS 238
SV NS++ MY+ G TE E +F E+ RDV S N +++ ++ G G++N+MQS
Sbjct: 326 VSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQS 385
Query: 239 LEGHSWNIETLTLVISAFAKCGNLS---KGEGVHCLVIKTGFSDDVLQ--TSLLDFYAKC 293
++ +I T V+S + CG+LS +G VH ++ L+ S++D Y KC
Sbjct: 386 VDKIQPDIAT---VVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKC 442
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAE------DLVIVPE 347
G + LF+ + ++ +M+S F QNG +A LF+++ +E L V
Sbjct: 443 GLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLA 502
Query: 348 IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
I L +C + +L G+ VH +L K G+++SA
Sbjct: 503 I----LTSCDSSDSLIFGKSVHCWLQKL-----------------------GDLTSAFLR 535
Query: 408 FDRMP-VKDVIAWTSMIEGFGSHGFGFEALKYFNLM-MEHRMQPNSVTFLSLLSACSHSG 465
+ M +D+ +W S+I G S G E+L+ F M E +++ + +T L +SA + G
Sbjct: 536 LETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLG 595
Query: 466 LVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGAL 525
LV +G + ++ + E ++ ++GRC ++ A+ + ++ P+ W +
Sbjct: 596 LVLQG-RCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVK-VFGLISDPNLCSWNCV 653
Query: 526 LAASGVYGNKTLGE-YTAQRLLELEPDNAGYHTLLS 560
++A + NK E + R L+LEP+ + LLS
Sbjct: 654 ISA--LSQNKAGREVFQLFRNLKLEPNEITFVGLLS 687
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 207/417 (49%), Gaps = 13/417 (3%)
Query: 56 MRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTS 115
MR + + HC A++ GL DL + ++ FY + + + +FD + +DV+ W S
Sbjct: 99 MRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNS 158
Query: 116 MIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG 174
MI A LF +M E +S TL++ A + + +H A+++G
Sbjct: 159 MITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETG 218
Query: 175 VLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLIN 234
++ D S+ N+++ +YA + E +F+ + RD+ SWN +++ G +
Sbjct: 219 LVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFK 278
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV---LQTSLLDFYA 291
M G + T + VISA + L+ GE +H LVIK+G+S + + S++ Y+
Sbjct: 279 SMTG-SGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYS 337
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR- 350
KCG + + +F E+ + I+ A+++GF NG F EA + QMQ+ D I P+I
Sbjct: 338 KCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVD-KIQPDIATV 396
Query: 351 -NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFD 409
++ C +L + GR VHGY ++ L + S+++MY + G + A +F
Sbjct: 397 VSITSICGDLSFSREGRAVHGYTVRMEMQSRA---LEVINSVIDMYGKCGLTTQAELLFK 453
Query: 410 RMPVKDVIAWTSMIEGFGSHGFGFEALKYFN-LMMEHRMQPNSV-TFLSLLSACSHS 464
+D+++W SMI F +GF +A F ++ E+ S+ T L++L++C S
Sbjct: 454 TTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 186/374 (49%), Gaps = 8/374 (2%)
Query: 158 TPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILI 217
T +H +A+K G+L D + + +L Y G LF E+ ++DV WN +I
Sbjct: 101 TETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMI 160
Query: 218 SFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF 277
+ + G + GL EM +G+ ++ TL L SA + K +HCL I+TG
Sbjct: 161 TALNQNGRYIAAVGLFIEMIH-KGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGL 219
Query: 278 -SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQ 336
D L +L++ YAK L + +F + + ++ +M+ + NG +++ F+
Sbjct: 220 VGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKS 279
Query: 337 MQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYI 396
M + ++ AC+++ L LG +HG ++K+ ++ E ++ + SI++MY
Sbjct: 280 MTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSP--EAHVSVGNSIISMYS 337
Query: 397 RGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMME-HRMQPNSVTFL 455
+ G+ +A VF+ + +DVI+ +++ GF ++G EA N M ++QP+ T +
Sbjct: 338 KCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVV 397
Query: 456 SLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV 514
S+ S C EG ++ Y+++ AL+ ++D++G+CG+ +A ++ K
Sbjct: 398 SITSICGDLSFSREGRAVHGYTVRMEMQ-SRALEVINSVIDMYGKCGLTTQA-ELLFKTT 455
Query: 515 ILPDSRIWGALLAA 528
D W ++++A
Sbjct: 456 THRDLVSWNSMISA 469
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 145/291 (49%), Gaps = 10/291 (3%)
Query: 268 VHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGS 326
VHC +K G D+ +S LL FY + G+L S LF E+ K I +M++ QNG
Sbjct: 109 VHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGR 168
Query: 327 FMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLH 386
++ A+ LF +M + A ++L + ++H ++ G V G+
Sbjct: 169 YIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIET---GLV-GDSS 224
Query: 387 METSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHR 446
+ +++N+Y +G N+SSA VF M +D+++W +++ ++G ++L+YF M
Sbjct: 225 LCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSG 284
Query: 447 MQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKE 505
+ ++VTF ++SACS ++ G ++ +K G+ E + ++ ++ +CG E
Sbjct: 285 QEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDT-E 343
Query: 506 ALSIILKMVILPDSRIWGALL---AASGVYGNKTLGEYTAQRLLELEPDNA 553
A + + ++ D A+L AA+G++ Q + +++PD A
Sbjct: 344 AAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIA 394
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 6/159 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N +WN I L Q + F+ R + + + TF + A S+ YG
Sbjct: 646 NLCSWNCVISA---LSQNKAGREVFQLFRNLKLEPNEITFVGLLSA-STQLGSTSYGMQA 701
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
HC I+ G + + ++D Y C + +VF + +W S+I+ +
Sbjct: 702 HCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMG 761
Query: 127 SVACDLFNKM--RVELEPNSVTLIVMLQACCASTPLNVG 163
A +LF ++ E+EPN + I +L AC S ++ G
Sbjct: 762 EKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEG 800
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/457 (30%), Positives = 236/457 (51%), Gaps = 14/457 (3%)
Query: 173 SGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGL 232
SG + + + RM A+K F N+R + + + G + GL
Sbjct: 44 SGSMFSGNATTILRRMLAEKRIGR-----FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL 98
Query: 233 INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYA 291
+ G ET +++ + +KG+ +H + GF+ ++ L+ LL YA
Sbjct: 99 LWS----SGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYA 154
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
G L + LFR + + I AM+SG++Q G E + ++ M+ +V + +
Sbjct: 155 LSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFAS 214
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
+ AC+ L L+ G+ H ++K ++ N+ +++++++MY + + S VFD++
Sbjct: 215 VFRACSALDRLEHGKRAHAVMIKRC----IKSNIIVDSALVDMYFKCSSFSDGHRVFDQL 270
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
++VI WTS+I G+G HG E LK F M E +PN VTFL +L+AC+H GLV +G
Sbjct: 271 STRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGW 330
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGV 531
+ +YSMK +GIEP H+ MVD GR G ++EA ++K +WG+LL A +
Sbjct: 331 EHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 532 YGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
+GN L E A + LEL+P N G + + +N AS G ++RR+M +KK PG+S
Sbjct: 391 HGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYS 450
Query: 592 CIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQD 628
IE++G + F+ D +H +E+IY + ++ D
Sbjct: 451 QIELQGEVHRFMKDDTSHRLSEKIYKKVHEMTSFFMD 487
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 5/169 (2%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV-YGK 64
+ + WN I +V G L + MRQ + D +TF V RA S++ D + +GK
Sbjct: 172 RDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL--DRLEHGK 229
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H V I+ + ++ + ++D Y KC RVFD + R+V++WTS+I+GY
Sbjct: 230 RAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHG 289
Query: 125 HVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVK 172
VS F KM+ E PN VT +V+L AC ++ G + H Y++K
Sbjct: 290 KVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMK 337
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 10/296 (3%)
Query: 138 VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEE 197
+++EP T V+LQ C G +IH G ++ +K +L +YA G +
Sbjct: 104 LQVEPE--TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQT 161
Query: 198 VELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE-TLTLVISAF 256
+LF + RD+ WN +IS Y G + GL + + T V A
Sbjct: 162 AGILFRSLKIRDLIPWNAMISGYVQKG--LEQEGLFIYYDMRQNRIVPDQYTFASVFRAC 219
Query: 257 AKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLG 315
+ L G+ H ++IK S+ ++ ++L+D Y KC ++F ++ ++ IT
Sbjct: 220 SALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWT 279
Query: 316 AMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKN 375
+++SG+ +G E + F++M+ E P + +L AC + G + G H Y MK
Sbjct: 280 SLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG-WEHFYSMKR 338
Query: 376 LFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD-VIAWTSMIEGFGSHG 430
+ EG + ++++ R G + A + P K+ W S++ HG
Sbjct: 339 DYGIEPEGQHY--AAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 94/210 (44%), Gaps = 2/210 (0%)
Query: 57 RADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSM 116
R + GK H +G L+ Y ++ Y + A +F + RD++ W +M
Sbjct: 121 RKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAM 180
Query: 117 IAGYISERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGV 175
I+GY+ + ++ MR + P+ T + +AC A L G + H +K +
Sbjct: 181 ISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCI 240
Query: 176 LMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINE 235
+ V ++++ MY S + +F +++ R+V +W LIS Y G + V +
Sbjct: 241 KSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEK 300
Query: 236 MQSLEGHSWNIETLTLVISAFAKCGNLSKG 265
M+ EG N T +V++A G + KG
Sbjct: 301 MKE-EGCRPNPVTFLVVLTACNHGGLVDKG 329
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 224/377 (59%), Gaps = 14/377 (3%)
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFK 309
T +++ ++ CG+L + V +G D S+++ YAK G +D + +LF E+ +
Sbjct: 101 TSLLNMYSSCGDLRSAQRV---FDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPER 157
Query: 310 SYITLGAMMSGFIQNGSFMEAIALFQQMQ---AEDLVIVPEIW--RNLLDACANLGALKL 364
+ I+ +++G++ G + EA+ LF++MQ + + P + +L AC LGAL+
Sbjct: 158 NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQ 217
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM-PVKDVIAWTSMI 423
G+ VH Y+ K VE ++ + T++++MY + G++ A+ VF+ + KDV A+++MI
Sbjct: 218 GKWVHAYIDKY----HVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMI 273
Query: 424 EGFGSHGFGFEALKYFNLMM-EHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
+G E + F+ M + PNSVTF+ +L AC H GL++EG + M FG
Sbjct: 274 CCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFG 333
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTA 542
I P++ H+ CMVDL+GR G++KEA S I M + PD IWG+LL+ S + G+ E
Sbjct: 334 ITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGAL 393
Query: 543 QRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGF 602
+RL+EL+P N+G + LLSNV A GRW EV+ +R EM K + K PG S +EV+GV + F
Sbjct: 394 KRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEF 453
Query: 603 LSGDITHPEAEEIYAAL 619
+ GD + E+E IYA L
Sbjct: 454 VVGDESQQESERIYAML 470
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/447 (24%), Positives = 188/447 (42%), Gaps = 79/447 (17%)
Query: 11 WNLTIRT---HVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTH 67
WN+ IR +V Q HS +S + +MR V D TFP + + + G+ TH
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHN-PLHLPLGQRTH 85
Query: 68 CVAIQMGLDLDLYF----------C---------------------NTMIDFYVKCWCIG 96
+ GLD D + C N++++ Y K I
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 97 CARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE------LEPNSVTLIVM 150
AR++FD M R+V+SW+ +I GY+ A DLF +M++ + PN T+ +
Sbjct: 146 DARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTV 205
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI-NKRD 209
L AC L G +H Y K V +D + +++ MYA GS E + +F+ + +K+D
Sbjct: 206 LSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKD 265
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
V +++ +I +M G L +EM + + + N T ++ A G +++G+
Sbjct: 266 VKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYF 325
Query: 270 CLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFME 329
++I+ +F + S+Q + G M+ + ++G E
Sbjct: 326 KMMIE-------------EF-----GITPSIQHY-----------GCMVDLYGRSGLIKE 356
Query: 330 AIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMET 389
A + M E V+ IW +LL LG +K G L + + P+ ++
Sbjct: 357 AESFIASMPMEPDVL---IWGSLLSGSRMLGDIK---TCEGALKRLIELDPMNSGAYVLL 410
Query: 390 SILNMYIRGGNISSARAVFDRMPVKDV 416
S N+Y + G + + M VK +
Sbjct: 411 S--NVYAKTGRWMEVKCIRHEMEVKGI 435
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 123/269 (45%), Gaps = 13/269 (4%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFP---VVNRALSSM-R 57
E N ++W+ I +V G++ AL F++M Q+ P++ F P ++ LS+ R
Sbjct: 153 EMPERNVISWSCLINGYVMCGKYKEALDLFREM-QLPKPNEAFVRPNEFTMSTVLSACGR 211
Query: 58 ADAV-YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFD-LMLHRDVVSWTS 115
A+ GK H + +++D+ +ID Y KC + A+RVF+ L +DV ++++
Sbjct: 212 LGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSA 271
Query: 116 MIAGYISERHVSVACDLFNKMRV--ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKS 173
MI LF++M + PNSVT + +L AC +N G ++
Sbjct: 272 MICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEE 331
Query: 174 -GVLMDWSVKNSVLRMYADKGSTEEVELLFSEIN-KRDVASWNILISFYSMVGDMMRVAG 231
G+ ++ +Y G +E E + + + DV W L+S M+GD+ G
Sbjct: 332 FGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEG 391
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCG 260
+ + L+ N L+ + +AK G
Sbjct: 392 ALKRLIELD--PMNSGAYVLLSNVYAKTG 418
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 43/219 (19%)
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNM----------------- 394
LL + N L LG+ H ++ LF ++ + + TS+LNM
Sbjct: 68 LLPSFHNPLHLPLGQRTHAQIL--LFG--LDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS 123
Query: 395 --------------YIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFN 440
Y + G I AR +FD MP ++VI+W+ +I G+ G EAL F
Sbjct: 124 GSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFR 183
Query: 441 LMM-----EHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMV 494
M E ++PN T ++LSAC G + +G ++ Y K+ I+ L T ++
Sbjct: 184 EMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLG--TALI 241
Query: 495 DLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
D++ +CG ++ A + + D + + A++ +YG
Sbjct: 242 DMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 256/489 (52%), Gaps = 38/489 (7%)
Query: 165 QIHGYAVKSGVLMDWSVKNSVLRMY-ADKGSTEEVELLFSEINKRDVASWNILISFYSMV 223
QIH +K+G++ D + VL A L+F+ IN ++ WN +I +S
Sbjct: 43 QIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRS 102
Query: 224 G-DMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-V 281
M ++ I+ + S T V A+ + G G +H +VIK G DD
Sbjct: 103 SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSF 162
Query: 282 LQTSLLDFY-------------------------------AKCGKLDISVQLFREIHFKS 310
++ ++L Y AKCG +D + LF E+ ++
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN 222
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHG 370
++ +M+SGF++NG F +A+ +F++MQ +D+ +LL+ACA LGA + GR +H
Sbjct: 223 GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHE 282
Query: 371 YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHG 430
Y+++N F E N + T++++MY + G I VF+ P K + W SMI G ++G
Sbjct: 283 YIVRNRF----ELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNG 338
Query: 431 FGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH 490
F A+ F+ + ++P+SV+F+ +L+AC+HSG V + + MK + IEP++ H+
Sbjct: 339 FEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHY 398
Query: 491 TCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEP 550
T MV++ G G+++EA ++I M + D+ IW +LL+A GN + + A+ L +L+P
Sbjct: 399 TLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDP 458
Query: 551 DNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHP 610
D + LLSN AS G + E E R M E+ ++K+ G S IEV + F+S THP
Sbjct: 459 DETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHP 518
Query: 611 EAEEIYAAL 619
++ EIY+ L
Sbjct: 519 KSAEIYSLL 527
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 174/366 (47%), Gaps = 52/366 (14%)
Query: 258 KCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDF-YAKCGKLDISVQLFREIHFKSYITLG 315
+C + + + +H +IKTG SD V + +L F A ++ + +F I+ K+
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWN 93
Query: 316 AMMSGFIQNGSFME-AIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYL 372
++ GF ++ SF E AI++F M + P+ + ++ A LG + GR +HG +
Sbjct: 94 TIIRGFSRS-SFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMV 152
Query: 373 MKNLFNGPVEGNLHMETSILNMYI-------------------------------RGGNI 401
+K +E + + ++L+MY+ + G I
Sbjct: 153 IKE----GLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLI 208
Query: 402 SSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
A+ +FD MP ++ ++W SMI GF +G +AL F M E ++P+ T +SLL+AC
Sbjct: 209 DQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNAC 268
Query: 462 SHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSR 520
++ G +G I+ Y ++ F + + T ++D++ +CG ++E L++ P +
Sbjct: 269 AYLGASEQGRWIHEYIVRNRFELNSIV--VTALIDMYCKCGCIEEGLNVF---ECAPKKQ 323
Query: 521 I--WGALL--AASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELR 576
+ W +++ A+ + + + ++ LEPD+ + +L+ A +G + +E
Sbjct: 324 LSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC-AHSGEVHRADEFF 382
Query: 577 REMSEK 582
R M EK
Sbjct: 383 RLMKEK 388
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 167/396 (42%), Gaps = 39/396 (9%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWC-IGCARRVFDLMLHRDVVSWTSMIAGYIS 122
K H I+ GL D + ++ F + A VF + H++ W ++I G+
Sbjct: 42 KQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSR 101
Query: 123 ERHVSVACDLFNKM---RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
+A +F M ++P +T + +A G Q+HG +K G+ D
Sbjct: 102 SSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDS 161
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
++N++L MY G E +F + DV +WN +I ++ G + + L +EM
Sbjct: 162 FIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR 221
Query: 240 EGHSWNIE------------------------------TLTLVISAFAKCGNLSKGEGVH 269
G SWN T+ +++A A G +G +H
Sbjct: 222 NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIH 281
Query: 270 CLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
+++ F + ++ T+L+D Y KCG ++ + +F K +M+ G NG
Sbjct: 282 EYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEE 341
Query: 329 EAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
A+ LF +++ L + +L ACA+ G + LMK + +E ++
Sbjct: 342 RAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF-RLMKEKYM--IEPSIKHY 398
Query: 389 TSILNMYIRGGNISSARAVFDRMPV-KDVIAWTSMI 423
T ++N+ G + A A+ MPV +D + W+S++
Sbjct: 399 TLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 160/403 (39%), Gaps = 68/403 (16%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKM--RQMGVPHDTFTFPVVNRALSSMRADAVYG 63
N WN IR A+S F M V T+P V +A + A G
Sbjct: 87 KNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL-GQARDG 145
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWT--------- 114
+ H + I+ GL+ D + NTM+ YV C C+ A R+F M+ DVV+W
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 115 ----------------------SMIAGYISERHVSVACDLFNKMR-VELEPNSVTLIVML 151
SMI+G++ A D+F +M+ +++P+ T++ +L
Sbjct: 206 GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 152 QACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVA 211
AC G IH Y V++ ++ V +++ MY G EE +F K+ ++
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 212 SWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCL 271
WN +I + G R L +E++ G + + V++A A G + + + L
Sbjct: 326 CWNSMILGLANNGFEERAMDLFSELER-SGLEPDSVSFIGVLTACAHSGEVHRADEFFRL 384
Query: 272 VIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAI 331
+ + + E K Y + ++ G G EA
Sbjct: 385 MKE--------------------------KYMIEPSIKHYTLMVNVLGG---AGLLEEAE 415
Query: 332 ALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
AL + M E+ + IW +LL AC +G +++ + L K
Sbjct: 416 ALIKNMPVEEDTV---IWSSLLSACRKIGNVEMAKRAAKCLKK 455
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 7/230 (3%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P N ++WN I V G+F AL F++M++ V D FT + A + + A
Sbjct: 216 DEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASE 275
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
G+ H ++ +L+ +ID Y KC CI VF+ + + W SMI G
Sbjct: 276 -QGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGL 334
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
+ A DLF+++ R LEP+SV+ I +L AC S ++ + +K +++
Sbjct: 335 ANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFF-RLMKEKYMIEP 393
Query: 180 SVKNSVL--RMYADKGSTEEVELLFSEIN-KRDVASWNILISFYSMVGDM 226
S+K+ L + G EE E L + + D W+ L+S +G++
Sbjct: 394 SIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNV 443
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 177/626 (28%), Positives = 296/626 (47%), Gaps = 104/626 (16%)
Query: 59 DAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCAR------------------- 99
D G+ HC ++ GLD + Y CN++++ Y KC + A
Sbjct: 56 DVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVD 115
Query: 100 ------------RVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR-VELEPNSVT 146
++FD+M R VS+T++I GY S A +LF +MR + + N VT
Sbjct: 116 GYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVT 175
Query: 147 LIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEIN 206
L ++ AC + + A+K + V ++L MY ++ LF E+
Sbjct: 176 LATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP 235
Query: 207 KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI------------ETLTL--- 251
+R++ +WN++++ YS G + + L +++ + SW E L
Sbjct: 236 ERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTE 295
Query: 252 ---------------VISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGK 295
++SA A+ SKG +H ++K GF D LQ +++ FYA
Sbjct: 296 MLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSND 355
Query: 296 LDISVQLFREIHFKSYI-TLGAMMSGFIQNGSFMEAIALFQQMQAEDLV----------- 343
+ +++Q F E K +I + A+++GF++NG +A +F Q +D+
Sbjct: 356 IKLALQQF-EASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQ 414
Query: 344 -IVPEIWRNL--------------------LDACANLGALKLGRVVHGYLMKNLFNGPVE 382
+ P++ +L A ++LG+L+ G+ H YL N P
Sbjct: 415 SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL--NFSTIPPN 472
Query: 383 GNLHMETSILNMYIRGGNISSARAVFDR---MPVKDVIAWTSMIEGFGSHGFGFEALKYF 439
NL +I++MY + G+I +A +F + + + W ++I G +HG AL +
Sbjct: 473 DNL--TAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLY 530
Query: 440 NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGR 499
+ + ++PNS+TF+ +LSAC H+GLV G + SMK GIEP + H+ CMVDL G+
Sbjct: 531 SDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGK 590
Query: 500 CGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLL 559
G ++EA +I KM + D IWG LL+AS +GN + E A L ++P + G +L
Sbjct: 591 AGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVML 650
Query: 560 SNVKASAGRWNEVEELRREMSEKDLK 585
SNV A AGRW +V +R EM +D++
Sbjct: 651 SNVYADAGRWEDVALVREEMRTRDVE 676
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/493 (22%), Positives = 216/493 (43%), Gaps = 78/493 (15%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG-KMTH 67
+++ I+ + Q+ A+ F++MR +G+ + T V A S + ++ +M
Sbjct: 139 VSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHL--GGIWDCRMLQ 196
Query: 68 CVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVS 127
+AI++ L+ ++ ++ Y C C+ AR++FD M R++V+W M+ GY +
Sbjct: 197 SLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIE 256
Query: 128 VACDLFNK--------------------------------MRVELEPNSVTLIVMLQACC 155
A +LF++ +R ++P+ V ++ +L A
Sbjct: 257 QAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASA 316
Query: 156 ASTPLNVGTQIHGYAVKSGV-------------------------LMDWSVK------NS 184
S + G Q+HG VK G + SVK N+
Sbjct: 317 RSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNA 376
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
++ + G E+ +F + + +D+ SWN +IS Y+ L EM S
Sbjct: 377 LIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKP 436
Query: 245 NIETLTLVISAFAKCGNLSKGEGVH-CLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLF 303
+ T+ V SA + G+L +G+ H L T +D L +++D YAKCG ++ ++ +F
Sbjct: 437 DAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIF 496
Query: 304 REIHFKSYITLG---AMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACAN 358
+ S T+ A++ G +G A+ L+ +Q+ L I P + +L AC +
Sbjct: 497 HQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQS--LPIKPNSITFVGVLSACCH 554
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVI 417
G ++LG+ Y + +E ++ ++++ + G + A+ + +MPVK DV+
Sbjct: 555 AGLVELGKT---YFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVM 611
Query: 418 AWTSMIEGFGSHG 430
W ++ +HG
Sbjct: 612 IWGMLLSASRTHG 624
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 217/510 (42%), Gaps = 97/510 (19%)
Query: 146 TLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI 205
L+ L +C +S + G QIH +KSG+ + + NSVL MYA + E +F +
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 206 NKRDVASWNILISFY-------------------SMVGDMMRVAG------------LIN 234
K D AS+NI++ Y S V + G L
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKC 293
EM++L G N TL VISA + G + + L IK V + T+LL Y C
Sbjct: 163 EMRNL-GIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLC 221
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAED------------ 341
L + +LF E+ ++ +T M++G+ + G +A LF Q+ +D
Sbjct: 222 LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCL 281
Query: 342 --------LVIVPEIWR-----------NLLDACANLGALKLGRVVHGYLMKNLFN---- 378
LV E+ R +LL A A G +HG ++K F+
Sbjct: 282 RKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDF 341
Query: 379 -----------------------GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD 415
V+ ++ +++ +++ G + AR VFD+ KD
Sbjct: 342 LQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKD 401
Query: 416 VIAWTSMIEGFGSHGFGFEALKYFNLMM-EHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
+ +W +MI G+ AL F M+ +++P+++T +S+ SA S G + EG + +
Sbjct: 402 IFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH 461
Query: 475 YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI--WGALLAASGVY 532
+ + I P + ++D++ +CG ++ AL+I + + S I W A++ S +
Sbjct: 462 DYLNFS-TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
Query: 533 GNKTLG--EYTAQRLLELEPDNAGYHTLLS 560
G+ L Y+ + L ++P++ + +LS
Sbjct: 521 GHAKLALDLYSDLQSLPIKPNSITFVGVLS 550
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 142/298 (47%), Gaps = 63/298 (21%)
Query: 247 ETLTLVISAFAKCG---NLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKC--------- 293
+T ++SA C +++ G +HC V+K+G S+ + S+L+ YAKC
Sbjct: 39 DTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESV 98
Query: 294 ----GKLDIS------------------VQLFREIHFKSYITLGAMMSGFIQNGSFMEAI 331
KLD + ++LF + +S ++ ++ G+ QN + EA+
Sbjct: 99 FRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAM 158
Query: 332 ALFQQMQAEDLVIVPEIWRNLLDACANLG-----------ALKL---GRV------VHGY 371
LF++M+ +++ ++ AC++LG A+KL GRV +H Y
Sbjct: 159 ELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMY 218
Query: 372 LM-------KNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
+ + LF+ E NL +LN Y + G I A +FD++ KD+++W +MI+
Sbjct: 219 CLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMID 278
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM-KWGF 481
G EAL Y+ M+ M+P+ V + LLSA + S S+G +++ ++ K GF
Sbjct: 279 GCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGF 336
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 265/515 (51%), Gaps = 20/515 (3%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQ--FHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRAD 59
E +N +WN +R V G+ + LSTF +MR++GV + ++ V ++ + A
Sbjct: 171 ESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASA- 229
Query: 60 AVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
G TH +AI+ GL ++ +++D Y KC +G ARRVFD ++ RD+V W +MIAG
Sbjct: 230 LRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAG 289
Query: 120 YISERHVSVACDLFNKMRVE--LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM 177
+ A LF M E + PNSV L +L L +G ++H + +KS +
Sbjct: 290 LAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYV 349
Query: 178 DWS-VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
+ V + ++ +Y G +F +R+ SW L+S Y+ G + I M
Sbjct: 350 EQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWM 409
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGK 295
Q EG ++ T+ V+ A+ + +G+ +HC +K F +V L TSL+ Y+KCG
Sbjct: 410 QQ-EGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 296 LDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM----QAEDLVIVPEIWRN 351
+ ++LF + ++ AM+ +++N I +F+ M D V + +
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRV--- 525
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
L C++L ALKLG+ +HG+++K F E + I+ MY + G++ SA FD +
Sbjct: 526 -LTVCSDLKALKLGKELHGHILKKEF----ESIPFVSARIIKMYGKCGDLRSANFSFDAV 580
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
VK + WT++IE +G + +A+ F M+ PN+ TF ++LS CS +G V E
Sbjct: 581 AVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAY 640
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEA 506
+ + M + ++P+ +H++ +++L RCG V+EA
Sbjct: 641 RFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 243/514 (47%), Gaps = 22/514 (4%)
Query: 27 ALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMI 86
AL+ + Q G+P + TF + A R ++GK H GL+ + + ++
Sbjct: 95 ALTILDYLEQRGIPVNATTFSALLEACVR-RKSLLHGKQVHVHIRINGLESNEFLRTKLV 153
Query: 87 DFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI--SERHVSVACDLFNKMR-VELEPN 143
Y C + A++VFD +V SW +++ G + ++ F +MR + ++ N
Sbjct: 154 HMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLN 213
Query: 144 SVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFS 203
+L + ++ ++ L G + H A+K+G+ +K S++ MY G +F
Sbjct: 214 VYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFD 273
Query: 204 EINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLS 263
EI +RD+ W +I+ + GL M S E N LT ++ L
Sbjct: 274 EIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALK 333
Query: 264 KGEGVHCLVIKTG--FSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGF 321
G+ VH V+K+ + + L+D Y KCG + ++F ++ I+ A+MSG+
Sbjct: 334 LGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGY 393
Query: 322 IQNGSFMEAIALFQQMQAE----DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLF 377
NG F +A+ MQ E D+V + + L CA L A+K G+ +H Y +KNLF
Sbjct: 394 AANGRFDQALRSIVWMQQEGFRPDVVTIATV----LPVCAELRAIKQGKEIHCYALKNLF 449
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK 437
N+ + TS++ MY + G +FDR+ ++V AWT+MI+ + + ++
Sbjct: 450 ----LPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIE 505
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDL 496
F LM+ + +P+SVT +L+ CS + G +++ + +K F P + ++ +
Sbjct: 506 VFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSAR--IIKM 563
Query: 497 FGRCGMVKEALSIILKMVILPDSRIWGALLAASG 530
+G+CG ++ A + V + S W A++ A G
Sbjct: 564 YGKCGDLRSA-NFSFDAVAVKGSLTWTAIIEAYG 596
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 210/407 (51%), Gaps = 25/407 (6%)
Query: 105 MLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEP-NSVTLIVMLQACCASTPLNVG 163
++HRD I + + ++ VA + + + P N+ T +L+AC L G
Sbjct: 78 IIHRD-------IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 164 TQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMV 223
Q+H + +G+ + ++ ++ MY GS ++ + +F E +V SWN L+ +
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 224 GD--MMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV 281
G V EM+ L G N+ +L+ V +FA L +G H L IK G + V
Sbjct: 191 GKKRYQDVLSTFTEMREL-GVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSV 249
Query: 282 -LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAE 340
L+TSL+D Y KCGK+ ++ ++F EI + + GAM++G N EA+ LF+ M +E
Sbjct: 250 FLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISE 309
Query: 341 DLVIVPE--IWRNLLDACANLGALKLGRVVHGYLM--KNLFNGPVEGNLHMETSILNMYI 396
+ I P I +L ++ ALKLG+ VH +++ KN P + + ++++Y
Sbjct: 310 E-KIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPF-----VHSGLIDLYC 363
Query: 397 RGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLS 456
+ G+++S R VF ++ I+WT+++ G+ ++G +AL+ M + +P+ VT +
Sbjct: 364 KCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIAT 423
Query: 457 LLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGM 502
+L C+ + +G +I+ Y++K F P + T ++ ++ +CG+
Sbjct: 424 VLPVCAELRAIKQGKEIHCYALKNLF--LPNVSLVTSLMVMYSKCGV 468
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 149/481 (30%), Positives = 254/481 (52%), Gaps = 13/481 (2%)
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYAD---KGSTEEVE 199
N+ I+++ C + L QI YA+KS + D S ++ + + S
Sbjct: 28 NTQNPILLISKCNSLREL---MQIQAYAIKSHI-EDVSFVAKLINFCTESPTESSMSYAR 83
Query: 200 LLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKC 259
LF +++ D+ +N + YS + + V L E+ +G + T ++ A A
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILE-DGILPDNYTFPSLLKACAVA 142
Query: 260 GNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
L +G +HCL +K G D+V + +L++ Y +C +D + +F I + AM+
Sbjct: 143 KALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMI 202
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFN 378
+G+ + EA++LF++MQ + L ++L +CA LG+L LG+ +H Y K+ F
Sbjct: 203 TGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFC 262
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKY 438
V+ N T++++M+ + G++ A ++F++M KD AW++MI + +HG +++
Sbjct: 263 KYVKVN----TALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 439 FNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFG 498
F M +QP+ +TFL LL+ACSH+G V EG K + M FGI P++ H+ MVDL
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 499 RCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTL 558
R G +++A I K+ I P +W LLAA + N L E ++R+ EL+ + G + +
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVI 438
Query: 559 LSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAA 618
LSN+ A +W V+ LR+ M ++ K PG S IEV V + F SGD +++ A
Sbjct: 439 LSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRA 498
Query: 619 L 619
L
Sbjct: 499 L 499
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 172/359 (47%), Gaps = 10/359 (2%)
Query: 78 DLYFCNTMIDFYVKCWC---IGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFN 134
D+ F +I+F + + AR +F+ M D+V + SM GY + LF
Sbjct: 59 DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFV 118
Query: 135 KMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKG 193
++ + + P++ T +L+AC + L G Q+H ++K G+ + V +++ MY +
Sbjct: 119 EILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECE 178
Query: 194 STEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVI 253
+ +F I + V +N +I+ Y+ L EMQ I TL V+
Sbjct: 179 DVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEI-TLLSVL 237
Query: 254 SAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYI 312
S+ A G+L G+ +H K F V + T+L+D +AKCG LD +V +F ++ +K
Sbjct: 238 SSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQ 297
Query: 313 TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYL 372
AM+ + +G +++ +F++M++E++ + LL+AC++ G ++ GR +
Sbjct: 298 AWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQM 357
Query: 373 MKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV-IAWTSMIEGFGSHG 430
+ G V H S++++ R GN+ A D++P+ + W ++ SH
Sbjct: 358 VSKF--GIVPSIKHY-GSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHN 413
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 161/342 (47%), Gaps = 35/342 (10%)
Query: 28 LSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMID 87
S F ++ + G+ D +TFP + +A + +A G+ HC+++++GLD ++Y C T+I+
Sbjct: 114 FSLFVEILEDGILPDNYTFPSLLKACAVAKA-LEEGRQLHCLSMKLGLDDNVYVCPTLIN 172
Query: 88 FYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVT 146
Y +C + AR VFD ++ VV + +MI GY + A LF +M+ + L+PN +T
Sbjct: 173 MYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEIT 232
Query: 147 LIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEIN 206
L+ +L +C L++G IH YA K V +++ M+A GS ++ +F ++
Sbjct: 233 LLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMR 292
Query: 207 KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGE 266
+D +W+ +I Y+ G + + M+S I L L ++A + G + +G
Sbjct: 293 YKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGL-LNACSHTGRVEEG- 350
Query: 267 GVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGS 326
+ FS V + ++ K Y G+M+ + G+
Sbjct: 351 -------RKYFSQMVSKFGIVP------------------SIKHY---GSMVDLLSRAGN 382
Query: 327 FMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVV 368
+A ++ + P +WR LL AC++ L L V
Sbjct: 383 LEDAYEFIDKLP---ISPTPMLWRILLAACSSHNNLDLAEKV 421
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 250/480 (52%), Gaps = 44/480 (9%)
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDV 210
LQ S G +IH +K+G D ++ +L ++ G +F E+ K +
Sbjct: 41 LQEHINSPAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTL 100
Query: 211 ASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNL-----SKG 265
+++N +IS Y G + + L+ M S G + TL++V+ A G+ S
Sbjct: 101 SAYNYMISGYLKHGLVKELLLLVQRM-SYSGEKADGYTLSMVLKASNSRGSTMILPRSLC 159
Query: 266 EGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQN 324
VH +IK DDVL T+L+D Y K GKL+ + +F + ++ + +M+SG++
Sbjct: 160 RLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQ 219
Query: 325 GSFMEAIALFQQMQAEDLVIV------------------------------PEI--WRNL 352
G +A +F + +D+V+ P I + ++
Sbjct: 220 GFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASV 279
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP 412
+ AC+ L + ++G+ VH +MK+ V ++ M +S+L+MY + G I+ AR VFD+M
Sbjct: 280 IGACSVLTSHEVGQQVHAQIMKS----GVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQ 335
Query: 413 VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCK 472
K+V +WTSMI+G+G +G EAL+ F M E R++PN VTFL LSACSHSGLV +G +
Sbjct: 336 EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYE 395
Query: 473 IYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVY 532
I+ SM+ + ++P ++H+ C+VDL GR G + +A M PDS IW ALL++ ++
Sbjct: 396 IFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLH 455
Query: 533 GNKTLGEYTAQRLLELEPDN-AGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
GN L A L +L D G + LSNV AS +W+ V ++R M + + K G S
Sbjct: 456 GNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 187/410 (45%), Gaps = 48/410 (11%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
GK H I+ G DL ++ ++KC C+ AR+VFD + + ++ MI+GY+
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 123 ERHVSVACDLFNKMRVELEP-NSVTLIVMLQACCA--ST---PLNVGTQIHGYAVKSGV- 175
V L +M E + TL ++L+A + ST P ++ +H +K V
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 176 --------LMDWSVKN----------------------SVLRMYADKGSTEEVELLFSEI 205
L+D VK+ S++ Y ++G E+ E +F+
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 206 NKRDVASWNILISFYSMVGDMM-RVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSK 264
+D+ +N ++ +S G+ R + MQ H NI T VI A + +
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHP-NISTFASVIGACSVLTSHEV 291
Query: 265 GEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQ 323
G+ VH ++K+G ++ + +SLLD YAKCG ++ + ++F ++ K+ + +M+ G+ +
Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGK 351
Query: 324 NGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPV 381
NG+ EA+ LF +M+ + I P + L AC++ G + G + + ++ P
Sbjct: 352 NGNPEEALELFTRMK--EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKP- 408
Query: 382 EGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGSHG 430
+ I+++ R G+++ A MP + D W +++ HG
Sbjct: 409 --KMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHG 456
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 184/463 (39%), Gaps = 80/463 (17%)
Query: 2 EEEPNNTM-AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P T+ A+N I ++ G L ++M G D +T +V +A +S +
Sbjct: 93 DELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTM 152
Query: 61 VYGK----MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSM 116
+ + + H I+ ++LD ++D YVK + AR VF+ M +VV TSM
Sbjct: 153 ILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSM 212
Query: 117 IAGYISERHVSVACDLFNKMRVE---------------------------------LEPN 143
I+GY+++ V A ++FN +V+ PN
Sbjct: 213 ISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPN 272
Query: 144 SVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFS 203
T ++ AC T VG Q+H +KSGV + +S+L MYA G + +F
Sbjct: 273 ISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFD 332
Query: 204 EINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLS 263
++ +++V SW +I Y G+ L M+ N T +SA + G +
Sbjct: 333 QMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEP-NYVTFLGALSACSHSGLVD 391
Query: 264 KGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQ 323
KG ++ ++ D+ K K++ H+ + L
Sbjct: 392 KGY-------------EIFESMQRDYSMK-PKME---------HYACIVDLMGRAGDL-- 426
Query: 324 NGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEG 383
N +F A A+ ++ + +IW LL +C G ++L + L K N
Sbjct: 427 NKAFEFARAMPERPDS-------DIWAALLSSCNLHGNVELASIAASELFK--LNADKRP 477
Query: 384 NLHMETSILNMYIRG---GNISSARAVFDRMPVKDVI--AWTS 421
++ S N+Y N+S R V R + I +WTS
Sbjct: 478 GAYLALS--NVYASNDKWDNVSKIREVMKRRRISKTIGRSWTS 518
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 239 bits (609), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 269/528 (50%), Gaps = 36/528 (6%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEP 142
NT+I Y K + A +F M +VVSW +I+G++ + L R L
Sbjct: 177 NTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVL 236
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
+ L L+AC L +G Q+H VKSG+ ++++ MY++ GS +F
Sbjct: 237 DGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVF 296
Query: 203 SEIN---KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW---NIETLTLVISAF 256
+ VA WN ++S + LINE E W I L ++
Sbjct: 297 HQEKLAVNSSVAVWNSMLSGF-----------LINEEN--EAALWLLLQIYQSDLCFDSY 343
Query: 257 AKCG---------NLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREI 306
G NL G VH LV+ +G+ D ++ + L+D +A G + + +LF +
Sbjct: 344 TLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL 403
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
K I ++ G +++G A LF+++ L I N+L C++L +L G+
Sbjct: 404 PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGK 463
Query: 367 VVHGYLMKNLFNG-PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
+HG +K + PV T++++MY++ G I + +FD M +DV++WT +I G
Sbjct: 464 QIHGLCIKKGYESEPVTA-----TALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVG 518
Query: 426 FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEP 485
FG +G EA +YF+ M+ ++PN VTFL LLSAC HSGL+ E +MK +G+EP
Sbjct: 519 FGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEP 578
Query: 486 ALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRL 545
L+H+ C+VDL G+ G+ +EA +I KM + PD IW +LL A G + N L A++L
Sbjct: 579 YLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKL 638
Query: 546 LELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
L+ PD+ +T LSN A+ G W+++ ++ RE ++K K+ G S I
Sbjct: 639 LKGFPDDPSVYTSLSNAYATLGMWDQLSKV-REAAKKLGAKESGMSWI 685
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 237/542 (43%), Gaps = 45/542 (8%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G+ I+ G+ +++ N +I YV + A +VFD M R++V+WT+M++GY S
Sbjct: 24 GESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTS 83
Query: 123 ERHVSVACDLFNKM--RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ + A +L+ +M E N +L+AC + +G ++ K + D
Sbjct: 84 DGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVV 143
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
+ NSV+ MY G E F EI + SWN LIS Y G M L + M
Sbjct: 144 LMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPN 203
Query: 241 GHSWN--------------IETLT------LVISAFA-KC--------GNLSKGEGVHCL 271
SWN +E L LV+ FA C G L+ G+ +HC
Sbjct: 204 VVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCC 263
Query: 272 VIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHF---KSYITLGAMMSGFIQNGSF 327
V+K+G S L+D Y+ CG L + +F + S +M+SGF+ N
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 328 MEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHM 387
A+ L Q+ DL L C N L+LG VH ++ + + E + +
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY----ELDYIV 379
Query: 388 ETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRM 447
+ +++++ GNI A +F R+P KD+IA++ +I G GF A F +++ +
Sbjct: 380 GSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGL 439
Query: 448 QPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEA 506
+ ++L CS + G +I+ +K G+ EP T +VD++ +CG +
Sbjct: 440 DADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT--ATALVDMYVKCGEIDNG 497
Query: 507 LSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE--LEPDNAGYHTLLSNVKA 564
+ ++ ++ D W ++ G G +++ +EP+ + LLS +
Sbjct: 498 V-VLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRH 556
Query: 565 SA 566
S
Sbjct: 557 SG 558
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 186/437 (42%), Gaps = 44/437 (10%)
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDV 210
L+ C G I + +K G+ + + N+V+ MY D + +F E+++R++
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 211 ASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHC 270
+W ++S Y+ G + L M E + N + V+ A G++ G V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 271 LVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFME 329
+ K D VL S++D Y K G+L + F+EI S + ++SG+ + G E
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 330 AIALFQ------------------------------QMQAEDLVIVPEIWRNLLDACANL 359
A+ LF +MQ E LV+ L AC+
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFG 251
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF--DRMPVKDVI 417
G L +G+ +H ++K+ +E + +++++MY G++ A VF +++ V +
Sbjct: 252 GLLTMGKQLHCCVVKS----GLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV 307
Query: 418 A-WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
A W SM+ GF + AL + + + +S T L C + + G ++ +S
Sbjct: 308 AVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQV-HS 366
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI--WGALLAASGVYGN 534
+ G E + +VDL G +++A + + LP+ I + L+ G
Sbjct: 367 LVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHR---LPNKDIIAFSGLIRGCVKSGF 423
Query: 535 KTLGEYTAQRLLELEPD 551
+L Y + L++L D
Sbjct: 424 NSLAFYLFRELIKLGLD 440
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 5 PN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
PN + +A++ IR V G A F+++ ++G+ D F + + SS+ A +G
Sbjct: 404 PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSL-ASLGWG 462
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K H + I+ G + + ++D YVKC I +FD ML RDVVSWT +I G+
Sbjct: 463 KQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQN 522
Query: 124 RHVSVACDLFNKM-RVELEPNSVTLIVMLQAC 154
V A F+KM + +EPN VT + +L AC
Sbjct: 523 GRVEEAFRYFHKMINIGIEPNKVTFLGLLSAC 554
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 172/634 (27%), Positives = 313/634 (49%), Gaps = 37/634 (5%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
++++WN+ + +D G L F K+R G +T T +V A S+ D G+
Sbjct: 91 DSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFD---GEKI 147
Query: 67 HCVAIQMGLDLDLYFC------NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
H I+ G FC N+++ Y + AR++FD M RDV+SW+ +I Y
Sbjct: 148 HGYVIRSG------FCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSY 200
Query: 121 ISERHVSVACDLFNKM--RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGV-LM 177
+ + V LF +M + EP+ VT+ +L+AC ++VG +HG++++ G L
Sbjct: 201 VQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLA 260
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
D V NS++ MY+ + +F E R++ SWN +++ + R +
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV---HNQRYDEALEMFH 317
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKG---EGVHCLVIKTGF-SDDVLQTSLLDFYAKC 293
+ + ++ +T V+S C + + +H ++I+ G+ S++V +SL+D Y C
Sbjct: 318 LMVQEAVEVDEVT-VVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSC 376
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLL 353
+D + + + +K ++ M+SG G EAI++F M+ I +LL
Sbjct: 377 SLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITV---ISLL 433
Query: 354 DACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV 413
+AC+ L+ + HG ++ ++ + TSI++ Y + G I AR FD++
Sbjct: 434 NACSVSADLRTSKWAHGIAIRRSL---AINDISVGTSIVDAYAKCGAIEMARRTFDQITE 490
Query: 414 KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKI 473
K++I+WT +I + +G +AL F+ M + PN+VT+L+ LSAC+H GLV +G I
Sbjct: 491 KNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMI 550
Query: 474 YYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSII--LKMVILPDSRIWGALLAA-SG 530
+ SM +P+L H++C+VD+ R G + A+ +I L + + WGA+L+
Sbjct: 551 FKSMVEE-DHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRN 609
Query: 531 VYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGW 590
+ + +LELEP + + L S+ A+ W +V +RR + E+ ++ G+
Sbjct: 610 RFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGY 669
Query: 591 SCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSR 624
S + ++ FL+GD E+ + +L R
Sbjct: 670 SMVREGNLAKRFLAGDKLSQSDSELNDVVQSLHR 703
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 151/555 (27%), Positives = 259/555 (46%), Gaps = 57/555 (10%)
Query: 22 GQFHSALSTFKKMRQMGVP-HDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLY 80
G++ +S + ++++ GV +D F FP+V +A + + L+
Sbjct: 23 GKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSW--------------------LF 62
Query: 81 FCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRV-E 139
N++ DFY+KC + R FD M RD VSW ++ G + F+K+RV
Sbjct: 63 QGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWG 122
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
EPN+ TL++++ AC + G +IHGY ++SG SV+NS+L MYAD S
Sbjct: 123 FEPNTSTLVLVIHAC--RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSL-SAR 179
Query: 200 LLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKC 259
LF E+++RDV SW+++I Y + + L EM + T+T V+ A
Sbjct: 180 KLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVM 239
Query: 260 GNLSKGEGVHCLVIKTGF--SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
++ G VH I+ GF +D + SL+D Y+K +D + ++F E ++ ++ ++
Sbjct: 240 EDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSI 299
Query: 318 MSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLF 377
++GF+ N + EA+ +F M E + + +LL C + +HG +++ +
Sbjct: 300 LAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGY 359
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK 437
E N +S+++ Y + A V D M KDV++ ++MI G G EA+
Sbjct: 360 ----ESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE-------PALDHH 490
F M R PN++T +SLL+ACS S + + KW GI +
Sbjct: 416 IFCHM---RDTPNAITVISLLNACSVSADLR-------TSKWAHGIAIRRSLAINDISVG 465
Query: 491 TCMVDLFGRCG---MVKEALSIILKMVILPDSRIWGALLAASGVYG--NKTLGEYTAQRL 545
T +VD + +CG M + I + I+ W +++A + G +K L + +
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQITEKNIIS----WTVIISAYAINGLPDKALALFDEMKQ 521
Query: 546 LELEPDNAGYHTLLS 560
P+ Y LS
Sbjct: 522 KGYTPNAVTYLAALS 536
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 115/437 (26%), Positives = 213/437 (48%), Gaps = 27/437 (6%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKM-RQMGVPHDTFTFPVVNRALSSMRADA 60
E + ++W++ IR++V + L FK+M + D T V +A + M D
Sbjct: 184 EMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME-DI 242
Query: 61 VYGKMTHCVAIQMGLDL-DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
G+ H +I+ G DL D++ CN++ID Y K + + A RVFD R++VSW S++AG
Sbjct: 243 DVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAG 302
Query: 120 YISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQAC-CASTPLNVGTQIHGYAVKSGVLM 177
++ + A ++F+ M E +E + VT++ +L+ C PL + IHG ++ G
Sbjct: 303 FVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS-IHGVIIRRGYES 361
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
+ +S++ Y ++ + + +DV S + +IS + AG +E
Sbjct: 362 NEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAH-------AGRSDEAI 414
Query: 238 SLEGHSWNIETLTLVISAFAKC---GNLSKGEGVHCLVIKTGFS--DDVLQTSLLDFYAK 292
S+ H + VIS C +L + H + I+ + D + TS++D YAK
Sbjct: 415 SIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAK 474
Query: 293 CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL 352
CG ++++ + F +I K+ I+ ++S + NG +A+ALF +M+ + +
Sbjct: 475 CGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAA 534
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP 412
L AC + G +K G ++ K++ + +L + I++M R G I +A + +P
Sbjct: 535 LSACNHGGLVKKGLMI----FKSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNLP 590
Query: 413 VKDV----IAWTSMIEG 425
+DV AW +++ G
Sbjct: 591 -EDVKAGASAWGAILSG 606
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 168/571 (29%), Positives = 277/571 (48%), Gaps = 36/571 (6%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
++ N +I+ Y KC I AR+VFD M R+VVSWT++I GY+ + LF+ M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 138 VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYA---DKGS 194
PN TL +L +C G Q+HG A+K G+ V N+V+ MY D +
Sbjct: 155 SHCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAA 210
Query: 195 TEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVIS 254
E +F I +++ +WN +I+ + + G+ M S +G ++ TL + S
Sbjct: 211 AYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHS-DGVGFDRATLLNICS 269
Query: 255 AFAKCGNLSKGE------GVHCLVIKTGFSDDV--------LQTSLLDFYAKCGKLDISV 300
+ K +L E +H L +K+G + + +L+ Y C KL + +
Sbjct: 270 SLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEM 329
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
R+I + +++ F AI LF Q++ E L + ++L ACA L
Sbjct: 330 SHCRDI-----VAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLV 383
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWT 420
+ +H ++K G + + S+++ Y + G++ VFD M +DV++W
Sbjct: 384 TARHALSIHAQVIK----GGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWN 439
Query: 421 SMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWG 480
SM++ + HG L F M + P+S TF++LLSACSH+G V EG +I+ SM
Sbjct: 440 SMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEK 496
Query: 481 FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEY 540
P L+H+ C++D+ R EA +I +M + PD+ +W ALL + +GN LG+
Sbjct: 497 PETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKL 556
Query: 541 TAQRLLEL-EPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVS 599
A +L EL EP N+ + +SN+ + G +NE +EM ++K+P S E+
Sbjct: 557 AADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKV 616
Query: 600 YGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
+ F SG P+ E +Y L L ++ G
Sbjct: 617 HEFASGGRHRPDKEAVYRELKRLISWLKEMG 647
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 206/439 (46%), Gaps = 30/439 (6%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++W I +V G F M P++ FT V L+S R + GK
Sbjct: 126 NVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNE-FTLSSV---LTSCRYEP--GKQV 179
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARR---VFDLMLHRDVVSWTSMIAGYISE 123
H +A+++GL +Y N +I Y +C A VF+ + +++V+W SMIA +
Sbjct: 180 HGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCC 239
Query: 124 RHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPL------NVGTQIHGYAVKSGVL 176
A +F +M + + + TL+ + + S+ L Q+H VKSG++
Sbjct: 240 NLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLV 299
Query: 177 MDWSVKNSVLRMYAD--KGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLIN 234
V +++++Y++ + T+ +L + RD+ +WN +I+ ++ V D R L
Sbjct: 300 TQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFA-VYDPERAIHLFG 358
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKC 293
+++ E S + T + V+ A A +H VIK GF +D VL SL+ YAKC
Sbjct: 359 QLRQ-EKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKC 417
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLL 353
G LD+ +++F ++ + ++ +M+ + +G + +FQ+M D+ + LL
Sbjct: 418 GSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALL 474
Query: 354 DACANLGALKLGRVVHGYLMKNLFNGP-VEGNLHMETSILNMYIRGGNISSARAVFDRMP 412
AC++ G ++ G + +++F P L+ +++M R + A V +MP
Sbjct: 475 SACSHAGRVEEGLRI----FRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMP 530
Query: 413 V-KDVIAWTSMIEGFGSHG 430
+ D + W +++ HG
Sbjct: 531 MDPDAVVWIALLGSCRKHG 549
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 149/483 (30%), Positives = 253/483 (52%), Gaps = 44/483 (9%)
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
N+++ Y G ++F + +RDV SWN ++ Y+ G++ E + G
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRR-SGI 175
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQ 301
+N + +++A K L H V+ GF S+ VL S++D YAKCG+++ + +
Sbjct: 176 KFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKR 235
Query: 302 LFREIHFKS----------YITLG---------------------AMMSGFIQNGSFMEA 330
F E+ K Y LG A+++G+++ GS A
Sbjct: 236 CFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRA 295
Query: 331 IALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
+ LF++M A L + PE + + L A A++ +L+ G+ +HGY+++ V N +
Sbjct: 296 LDLFRKMIA--LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT----NVRPNAIVI 349
Query: 389 TSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRM 447
+S+++MY + G++ ++ VF K D + W +MI HG G +AL+ + M++ R+
Sbjct: 350 SSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRV 409
Query: 448 QPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEAL 507
QPN T + +L+ACSHSGLV EG + + SM GI P +H+ C++DL GR G KE +
Sbjct: 410 QPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELM 469
Query: 508 SIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAG 567
I +M PD IW A+L ++GN+ LG+ A L++L+P+++ + LLS++ A G
Sbjct: 470 RKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
Query: 568 RWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEA--EEIYAALCTLSRV 625
+W VE+LR M ++ + K+ S IE++ F D +H A EEIY L L+ V
Sbjct: 530 KWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAV 589
Query: 626 TQD 628
++
Sbjct: 590 IEE 592
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 144/326 (44%), Gaps = 43/326 (13%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
+LY N M+ YVK + AR VFD M RDVVSW +M+ GY + ++ A + + R
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 138 VE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTE 196
++ N + +L AC S L + Q HG + +G L + + S++ YA G E
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 197 EVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE--------- 247
+ F E+ +D+ W LIS Y+ +GDM L EM SW
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 248 ---------------------TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTS 285
T + + A A +L G+ +H +I+T + ++ +S
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISS 351
Query: 286 LLDFYAKCGKLDISVQLFREIHFK-SYITLGAMMSGFIQNGSFMEAIALFQQM-----QA 339
L+D Y+K G L+ S ++FR K + M+S Q+G +A+ + M Q
Sbjct: 352 LIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQP 411
Query: 340 EDLVIVPEIWRNLLDACANLGALKLG 365
+V +L+AC++ G ++ G
Sbjct: 412 NRTTLVV-----ILNACSHSGLVEEG 432
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/393 (21%), Positives = 167/393 (42%), Gaps = 69/393 (17%)
Query: 218 SFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGN---LSKGEGVHCLVIK 274
SF S ++ ++ ++SL + L+ S +CG+ L +G+ +H +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRL-PFDLLASLLQQCGDTKSLKQGKWIHRHLKI 74
Query: 275 TGFS--DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIA 332
TGF + +L L+ Y KCGK + ++F ++H ++ + M+SG++++G + A
Sbjct: 75 TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARV 134
Query: 333 LFQQMQAEDLV--------------------IVPEIWRN-----------LLDACANLGA 361
+F M D+V E R+ LL AC
Sbjct: 135 VFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQ 194
Query: 362 LKLGRVVHGYLM---------------------------KNLFNGPVEGNLHMETSILNM 394
L+L R HG ++ K F+ ++H+ T++++
Sbjct: 195 LQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISG 254
Query: 395 YIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTF 454
Y + G++ +A +F MP K+ ++WT++I G+ G G AL F M+ ++P TF
Sbjct: 255 YAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTF 314
Query: 455 LSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV 514
S L A + + G +I+ M + P + ++D++ + G ++ + +
Sbjct: 315 SSCLCASASIASLRHGKEIHGYM-IRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICD 373
Query: 515 ILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE 547
D W +++A +G LG + A R+L+
Sbjct: 374 DKHDCVFWNTMISALAQHG---LG-HKALRMLD 402
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 146/339 (43%), Gaps = 37/339 (10%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+ ++WN + + G H AL +K+ R+ G+ + F+F + A R + +
Sbjct: 142 RDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQL-NRQ 200
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTS---------- 115
H + G ++ ++ID Y KC + A+R FD M +D+ WT+
Sbjct: 201 AHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGD 260
Query: 116 ---------------------MIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQA 153
+IAGY+ + + A DLF KM + ++P T L A
Sbjct: 261 MEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCA 320
Query: 154 CCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI-NKRDVAS 212
+ L G +IHGY +++ V + V +S++ MY+ GS E E +F +K D
Sbjct: 321 SASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVF 380
Query: 213 WNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG-EGVHCL 271
WN +IS + G + ++++M N TL ++++A + G + +G +
Sbjct: 381 WNTMISALAQHGLGHKALRMLDDMIKFRVQP-NRTTLVVILNACSHSGLVEEGLRWFESM 439
Query: 272 VIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFK 309
++ G D + L+D + G ++ E+ F+
Sbjct: 440 TVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE 478
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 111/264 (42%), Gaps = 32/264 (12%)
Query: 316 AMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKN 375
+ +S +A++ + + + + + ++ +LL C + +LK G+ +H +L
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 376 LFN------------------GPVEG----------NLHMETSILNMYIRGGNISSARAV 407
F P++ NL+ ++++ Y++ G + AR V
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 408 FDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
FD MP +DV++W +M+ G+ G EAL ++ ++ N +F LL+AC S +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 468 SEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALL 526
+ + + GF L ++D + +CG ++ A +M + D IW L+
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLS--CSIIDAYAKCGQMESAKRCFDEMTV-KDIHIWTTLI 252
Query: 527 AASGVYGNKTLGEYTAQRLLELEP 550
+ G+ E + E P
Sbjct: 253 SGYAKLGDMEAAEKLFCEMPEKNP 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 102/228 (44%), Gaps = 5/228 (2%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E N ++W I +V G + AL F+KM +GV + FTF A +S+ A
Sbjct: 270 EMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASI-ASLR 328
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR-DVVSWTSMIAGY 120
+GK H I+ + + +++ID Y K + + RVF + + D V W +MI+
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISAL 388
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQ-IHGYAVKSGVLMD 178
A + + M + ++PN TL+V+L AC S + G + V+ G++ D
Sbjct: 389 AQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPD 448
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEIN-KRDVASWNILISFYSMVGD 225
++ + G +E+ E+ + D WN ++ + G+
Sbjct: 449 QEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGN 496
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 148/446 (33%), Positives = 236/446 (52%), Gaps = 20/446 (4%)
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
+V+R YA +G +E ++ + K ++ + S +++ G + ++ G
Sbjct: 119 AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFS------ALLKACGTMKDLNL--GRQ 170
Query: 244 WNIETLTLVISAFAKCGN-----LSKGEGVHCL--VIKTGFSDDVLQ-TSLLDFYAKCGK 295
++ +T L F GN K E + C V DV+ T L+ YA+ G
Sbjct: 171 FHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGN 230
Query: 296 LDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDA 355
++ + +LF + K + AM++GF QN EA+ F +M+ + + A
Sbjct: 231 MECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISA 290
Query: 356 CANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD 415
CA LGA K K+ ++ P + ++ + +++++MY + GN+ A VF M K+
Sbjct: 291 CAQLGASKYADRAVQIAQKSGYS-PSD-HVVIGSALIDMYSKCGNVEEAVNVFMSMNNKN 348
Query: 416 VIAWTSMIEGFGSHGFGFEALKYFNLMM-EHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
V ++SMI G +HG EAL F+ M+ + ++PN+VTF+ L ACSHSGLV +G +++
Sbjct: 349 VFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVF 408
Query: 475 YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN 534
SM FG++P DH+TCMVDL GR G ++EAL +I M + P +WGALL A ++ N
Sbjct: 409 DSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNN 468
Query: 535 KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS-CI 593
+ E A+ L ELEPD G + LLSNV ASAG W V +R+ + EK LKK P S +
Sbjct: 469 PEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVV 528
Query: 594 EVKGVSYGFLSGDITHPEAEEIYAAL 619
+ G + F G++ HP + +I L
Sbjct: 529 DKNGQMHKFFPGNLNHPMSNKIQDKL 554
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 139/293 (47%), Gaps = 31/293 (10%)
Query: 252 VISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCG-KLD-ISVQLFREIHF 308
+IS C NL++ + +H V++ G + T L+ K G +D + ++ + F
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQF 111
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVV 368
++ A++ G+ G F EAIA++ M+ E++ V + LL AC + L LGR
Sbjct: 112 RNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF 171
Query: 369 HGYLM---------------------------KNLFNGPVEGNLHMETSILNMYIRGGNI 401
H + +F+ E ++ T ++ Y R GN+
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 402 SSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
A +F+ +P KD++AWT+M+ GF + EAL+YF+ M + ++ + VT +SAC
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 462 SHSGLVSEGCK-IYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+ G + + + K G+ + + ++D++ +CG V+EA+++ + M
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSM 344
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 165/388 (42%), Gaps = 40/388 (10%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCI--GCARRVFDLMLHRDVVSWTSMIAGYI 121
K H ++ GLD Y +I K ARRV + + R+ WT++I GY
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 122 SERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
E A ++ MR E+ P S T +L+AC LN+G Q H +
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVY 185
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
V N+++ MY S + +F E+ +RDV SW LI+ Y+ VG+M A L + + +
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 241 GHSWNIE------------------------------TLTLVISAFAKCGNLSKGEGVHC 270
+W T+ ISA A+ G +
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 271 LVIKTGFSDD---VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSF 327
+ K+G+S V+ ++L+D Y+KCG ++ +V +F ++ K+ T +M+ G +G
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 328 MEAIALFQQMQAEDLVIVPEI-WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLH 386
EA+ LF M + + + + L AC++ G + GR V + + P +
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY- 424
Query: 387 METSILNMYIRGGNISSARAVFDRMPVK 414
T ++++ R G + A + M V+
Sbjct: 425 --TCMVDLLGRTGRLQEALELIKTMSVE 450
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 45/345 (13%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N W IR + G+F A++ + MR+ + +FTF + +A +M+ D G+
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMK-DLNLGRQF 171
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H ++ +Y NTMID YVKC I CAR+VFD M RDV+SWT +IA Y ++
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNM 231
Query: 127 SVACDLFNKM-----------------------------RVE---LEPNSVTLIVMLQAC 154
A +LF + R+E + + VT+ + AC
Sbjct: 232 ECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISAC 291
Query: 155 C---ASTPLNVGTQI---HGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR 208
AS + QI GY+ V+ + ++++ MY+ G+ EE +F +N +
Sbjct: 292 AQLGASKYADRAVQIAQKSGYSPSDHVV----IGSALIDMYSKCGNVEEAVNVFMSMNNK 347
Query: 209 DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV 268
+V +++ +I + G L + M + N T + A + G + +G V
Sbjct: 348 NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQV 407
Query: 269 HCLVIKTGFSDDVLQ--TSLLDFYAKCGKLDISVQLFREIHFKSY 311
+ +T T ++D + G+L +++L + + + +
Sbjct: 408 FDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPH 452
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 222/393 (56%), Gaps = 11/393 (2%)
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCG---NLSKGEGVHCLVIKTGFSDDV-LQTSLL 287
L + S++ W+ + L SA CG + G G HCL +K GF DV L +SL+
Sbjct: 104 LEDSSSSVKRDGWSFDAYGLS-SAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLV 162
Query: 288 DFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE 347
Y G+++ + ++F E+ ++ ++ AM+SGF Q + L+ +M+
Sbjct: 163 VLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDY 222
Query: 348 IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
+ LL AC GAL GR VH + L G ++ LH+ S+++MY + G++ A +
Sbjct: 223 TFTALLSACTGSGALGQGRSVH---CQTLHMG-LKSYLHISNSLISMYCKCGDLKDAFRI 278
Query: 408 FDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHR-MQPNSVTFLSLLSACSHSGL 466
FD+ KDV++W SMI G+ HG +A++ F LMM +P+++T+L +LS+C H+GL
Sbjct: 279 FDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGL 338
Query: 467 VSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALL 526
V EG K ++++ G++P L+H++C+VDL GR G+++EAL +I M + P+S IWG+LL
Sbjct: 339 VKEGRK-FFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Query: 527 AASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKK 586
+ V+G+ G A+ L LEPD A H L+N+ AS G W E +R+ M +K LK
Sbjct: 398 FSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKT 457
Query: 587 KPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
PG S IE+ + F + D ++ EI L
Sbjct: 458 NPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVL 490
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 2/256 (0%)
Query: 56 MRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTS 115
+ D G HC+A++ G D+Y ++++ Y + A +VF+ M R+VVSWT+
Sbjct: 132 LNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTA 191
Query: 116 MIAGYISERHVSVACDLFNKMRVEL-EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG 174
MI+G+ E V + L++KMR +PN T +L AC S L G +H + G
Sbjct: 192 MISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMG 251
Query: 175 VLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLIN 234
+ + NS++ MY G ++ +F + + +DV SWN +I+ Y+ G M+ L
Sbjct: 252 LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFE 311
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKC 293
M G + T V+S+ G + +G L+ + G ++ S L+D +
Sbjct: 312 LMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF 371
Query: 294 GKLDISVQLFREIHFK 309
G L +++L + K
Sbjct: 372 GLLQEALELIENMPMK 387
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 161/362 (44%), Gaps = 45/362 (12%)
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDV 210
+++C + G+ H A+K G + D + +S++ +Y D G E +F E+ +R+V
Sbjct: 127 VRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV 186
Query: 211 ASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHC 270
SW +IS ++ + L ++M+ N T T ++SA G L +G VHC
Sbjct: 187 VSWTAMISGFAQEWRVDICLKLYSKMRKSTSDP-NDYTFTALLSACTGSGALGQGRSVHC 245
Query: 271 LVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFME 329
+ G + + SL+ Y KCG L + ++F + K ++ +M++G+ Q+G M+
Sbjct: 246 QTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQ 305
Query: 330 AIALFQQMQAEDLVIVPEI-WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
AI LF+ M + I + +L +C + G +K GR FN E L E
Sbjct: 306 AIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR--------KFFNLMAEHGLKPE 357
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ 448
LN Y + +++ G G EAL+ L+ M+
Sbjct: 358 ---LNHY------------------------SCLVDLLGRFGLLQEALE---LIENMPMK 387
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEP-ALDHHTCMVDLFGRCGMVKEAL 507
PNSV + SLL +C G V G + + + +EP H + +L+ G KEA
Sbjct: 388 PNSVIWGSLLFSCRVHGDVWTGIR---AAEERLMLEPDCAATHVQLANLYASVGYWKEAA 444
Query: 508 SI 509
++
Sbjct: 445 TV 446
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 177/617 (28%), Positives = 292/617 (47%), Gaps = 51/617 (8%)
Query: 9 MAWNLTIRTHVDLG---------QFHS-ALSTFK-KMRQMGVPHDTFTFPVVNRALSSMR 57
M+ L+ R +++LG QF+ AL +K K+ +G T P V +A + +
Sbjct: 1 MSRALSSRLNLELGNKLKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQ 60
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
+ G HC+ ++ G D D N++I Y K R+VFD MLHRD VS+ S+I
Sbjct: 61 EPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSII 120
Query: 118 AGYISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCA--STPLNVGTQIHGYAVKSGV 175
+ + A L +M L+ L A C + V H V
Sbjct: 121 NSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHAL-----V 175
Query: 176 LMDWSVKNSVL------RMYADKGSTEEVELLFSEINKRDVASWNILIS------FYSMV 223
L+D ++ SVL MY +F ++ ++ SW +IS Y M
Sbjct: 176 LVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMG 235
Query: 224 GDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG----VHCLVIKTG-FS 278
D+ R MQ E N TL V+ A C L+ G +H + G +
Sbjct: 236 VDLFRA------MQR-ENLRPNRVTLLSVLPA---CVELNYGSSLVKEIHGFSFRHGCHA 285
Query: 279 DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ 338
D+ L + + Y +CG + +S LF + + +M+SG+ + G E + L QM+
Sbjct: 286 DERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMR 345
Query: 339 AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRG 398
E + ++ AC N L VH ++K F ++ + ++++MY +
Sbjct: 346 KEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMS----HILLGNALIDMYAKC 401
Query: 399 GNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLL 458
G++S+AR VF + KD+++W+SMI +G HG G EAL+ F M++ + + + FL++L
Sbjct: 402 GSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAIL 461
Query: 459 SACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPD 518
SAC+H+GLV E I ++ + + L+H+ C ++L GR G + +A + + M + P
Sbjct: 462 SACNHAGLVEEAQTI-FTQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPS 520
Query: 519 SRIWGALLAASGVYGN-KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRR 577
+RIW +LL+A +G G+ A L++ EPDN + LLS + +G ++ EE+RR
Sbjct: 521 ARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRR 580
Query: 578 EMSEKDLKKKPGWSCIE 594
M + L K G+S IE
Sbjct: 581 VMQRRKLNKCYGFSKIE 597
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 168/406 (41%), Gaps = 41/406 (10%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E N ++W I V + + F+ M++ + + T V A + +
Sbjct: 212 EVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLV 271
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K H + + G D + Y +C + +R +F+ RDVV W+SMI+GY
Sbjct: 272 KEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAET 331
Query: 124 RHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
S +L N+MR E +E NSVTL+ ++ AC ST L+ + +H +K G + +
Sbjct: 332 GDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLG 391
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
N+++ MYA GS +F E+ ++D+ SW+ +I+ Y + G + M GH
Sbjct: 392 NALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIK-GGH 450
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQL 302
+ ++SA G + + + + + + GK + V L
Sbjct: 451 EVDDMAFLAILSACNHAGLVEEAQTI---------------------FTQAGKYHMPVTL 489
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
H+ YI L G F + F+ + IW +LL AC G L
Sbjct: 490 ---EHYACYINLL---------GRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 363 KL-GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
+ G+++ LMK+ + P L + ++ GN +A V
Sbjct: 538 DVAGKIIANELMKSEPDNPANYVL-----LSKIHTESGNYHAAEEV 578
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 235 bits (599), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 142/477 (29%), Positives = 251/477 (52%), Gaps = 11/477 (2%)
Query: 147 LIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADK--GSTEEVELLFSE 204
++ MLQ C + L +IH + + +G+ S+ N +LR A GS +LLF
Sbjct: 8 IVRMLQGCNSMKKLR---KIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDH 64
Query: 205 INKRDVAS-WNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLS 263
+ S WN LI +S + N M ++ T + + + ++
Sbjct: 65 FDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIP 124
Query: 264 KGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFI 322
K +H VI++GF DD ++ TSL+ Y+ G ++I+ ++F E+ + ++ M+ F
Sbjct: 125 KCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFS 184
Query: 323 QNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVE 382
G +A++++++M E + LL +CA++ AL +G ++H + + E
Sbjct: 185 HVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH----RIACDIRCE 240
Query: 383 GNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
+ + ++++MY + G++ +A VF+ M +DV+ W SMI G+G HG G EA+ +F M
Sbjct: 241 SCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKM 300
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGM 502
+ ++PN++TFL LL CSH GLV EG + + M F + P + H+ CMVDL+GR G
Sbjct: 301 VASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQ 360
Query: 503 VKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNV 562
++ +L +I D +W LL + ++ N LGE ++L++LE NAG + L++++
Sbjct: 361 LENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSI 420
Query: 563 KASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
++A +R+ + DL+ PGWS IE+ + F+ D HPE+ IY+ L
Sbjct: 421 YSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSEL 477
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 155/315 (49%), Gaps = 8/315 (2%)
Query: 113 WTSMIAGYISERHVSVACDLFNKMRVEL--EPNSVTLIVMLQACCASTPLNVGTQIHGYA 170
W +I G+ + + +N+M + P+ T L++C + +IHG
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 171 VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVA 230
++SG L D V S++R Y+ GS E +F E+ RD+ SWN++I +S VG +
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 231 GLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDF 289
+ M + EG + TL ++S+ A L+ G +H + V + +L+D
Sbjct: 194 SMYKRMGN-EGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDM 252
Query: 290 YAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW 349
YAKCG L+ ++ +F + + +T +M+ G+ +G +EAI+ F++M A + +
Sbjct: 253 YAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITF 312
Query: 350 RNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNI-SSARAVF 408
LL C++ G +K G V H +M + F+ + N+ ++++Y R G + +S ++
Sbjct: 313 LGLLLGCSHQGLVKEG-VEHFEIMSSQFH--LTPNVKHYGCMVDLYGRAGQLENSLEMIY 369
Query: 409 DRMPVKDVIAWTSMI 423
+D + W +++
Sbjct: 370 ASSCHEDPVLWRTLL 384
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/466 (24%), Positives = 190/466 (40%), Gaps = 63/466 (13%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPH-DTFTFPVVNRALSSMRADA 60
+ +P+ T WN IR + +++ + +M V D FTF N AL S
Sbjct: 66 DSDPS-TSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTF---NFALKSCERIK 121
Query: 61 VYGKM--THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIA 118
K H I+ G D +++ Y + A +VFD M RD+VSW MI
Sbjct: 122 SIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMIC 181
Query: 119 GYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM 177
+ + A ++ +M E + +S TL+ +L +C + LN+G +H A
Sbjct: 182 CFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCES 241
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
V N+++ MYA GS E +F+ + KRDV +WN +I Y + G + +M
Sbjct: 242 CVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV 301
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGV-HCLVIKTGF--SDDVLQTS-LLDFYAKC 293
+ I L L++ + L K EGV H ++ + F + +V ++D Y +
Sbjct: 302 ASGVRPNAITFLGLLLGCSHQ--GLVK-EGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRA 358
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLL 353
G+L+ S+++ ++ ED P +WR LL
Sbjct: 359 GQLENSLEM------------------------------IYASSCHED----PVLWRTLL 384
Query: 354 DACANLGALKLGRVVHGYLMK-NLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP 412
+C L+LG V L++ FN G+ + TSI + +S R +
Sbjct: 385 GSCKIHRNLELGEVAMKKLVQLEAFNA---GDYVLMTSIYSAANDAQAFASMRKLIRSHD 441
Query: 413 VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLL 458
++ V W+ + G H F +++ +M P S S L
Sbjct: 442 LQTVPGWSWIEIGDQVHKF----------VVDDKMHPESAVIYSEL 477
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 234 bits (598), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 173/621 (27%), Positives = 293/621 (47%), Gaps = 69/621 (11%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ +AWN + + G+ A+ K+M + G+ T+ ++ + + GK
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQL------GK-- 297
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
C+ +D K G + DV +WT+MI+G I
Sbjct: 298 ---------------CDAAMDLMQKMETFG---------ITADVFTWTAMISGLIHNGMR 333
Query: 127 SVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
A D+F KM + + PN+VT++ + AC +N G+++H AVK G + D V NS+
Sbjct: 334 YQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSL 393
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ MY+ G E+ +F + +DV +WN +I+ Y G + L MQ N
Sbjct: 394 VDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP-N 452
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFRE 305
I T +IS + K G+ +GE +D + + K D VQ
Sbjct: 453 IITWNTMISGYIKNGD--EGEA-------------------MDLFQRMEK-DGKVQ---- 486
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
++ T +++G+IQNG EA+ LF++MQ + +LL ACANL K+
Sbjct: 487 ---RNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMV 543
Query: 366 RVVHGYLMKNLFNGPVEGNLH-METSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
R +HG +++ + +H ++ ++ + Y + G+I +R +F M KD+I W S+I
Sbjct: 544 REIHGCVLRRNLDA-----IHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIG 598
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
G+ HG AL FN M + PN T S++ A G V EG K++YS+ + I
Sbjct: 599 GYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHII 658
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
PAL+H + MV L+GR ++EAL I +M I ++ IW + L ++G+ + + A+
Sbjct: 659 PALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAEN 718
Query: 545 LLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLS 604
L LEP+N +++S + A + E + + LKK G S IEV+ + + F +
Sbjct: 719 LFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTT 778
Query: 605 GDITHPEAEEIYAALCTLSRV 625
GD + + +Y + +SR+
Sbjct: 779 GDQSKLCTDVLYPLVEKMSRL 799
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 206/468 (44%), Gaps = 42/468 (8%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFN-KM 136
D++ ++ Y KC CI AR+VFD M R++ +W++MI Y E LF M
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMM 173
Query: 137 RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTE 196
+ + P+ +LQ C + G IH +K G+ V NS+L +YA G +
Sbjct: 174 KDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELD 233
Query: 197 EVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAF 256
F + +RDV +WN ++ Y G L+ EM+ EG S + T ++I +
Sbjct: 234 FATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEK-EGISPGLVTWNILIGGY 292
Query: 257 AKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGA 316
+ G + +D K I+ +F T A
Sbjct: 293 NQLGKCD---------------------AAMDLMQKMETFGITADVF---------TWTA 322
Query: 317 MMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNL 376
M+SG I NG +A+ +F++M +V + + AC+ L + G VH +K
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 377 F-NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEA 435
F + + GN S+++MY + G + AR VFD + KDV W SMI G+ G+ +A
Sbjct: 383 FIDDVLVGN-----SLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 437
Query: 436 LKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVD 495
+ F M + ++PN +T+ +++S +G E ++ M+ ++ ++
Sbjct: 438 YELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIA 497
Query: 496 LFGRCGMVKEALSIILKMV---ILPDS-RIWGALLAASGVYGNKTLGE 539
+ + G EAL + KM +P+S I L A + + G K + E
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 323 QNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVE 382
+NGS +EA + + + + LL++C + G++ LGR++H LF P
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF--GLFTEP-- 113
Query: 383 GNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
++ +ET +L+MY + G I+ AR VFD M +++ W++MI + E K F LM
Sbjct: 114 -DVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGM 502
M+ + P+ F +L C++ G V G K+ +S+ G+ L ++ ++ +CG
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAG-KVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 503 VKEALSIILKMVILPDSRIWGALLAA 528
+ A +M D W ++L A
Sbjct: 232 LDFATKFFRRMR-ERDVIAWNSVLLA 256
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 174/614 (28%), Positives = 292/614 (47%), Gaps = 50/614 (8%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGV-PHDTFTFPVVN----RALSSMRA 58
E NT+ WN I +V + + A F M + V +T V+ R L R
Sbjct: 67 EARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARK 126
Query: 59 DAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIA 118
++ +M D + NTMI Y K IG A +F+ M R+ VSW++MI
Sbjct: 127 --LFDEMP---------SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMIT 175
Query: 119 GYISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGY--AVKSGVL 176
G+ V A LF KM V+ +S L ++ + L+ + G ++ SG
Sbjct: 176 GFCQNGEVDSAVVLFRKMPVK---DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGRE 232
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINK---------------RDVASWNILISFYS 221
N+++ Y +G E LF +I ++V SWN +I Y
Sbjct: 233 DLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYL 292
Query: 222 MVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV 281
VGD++ L ++M+ + SWN +I + ++S+ E L + D
Sbjct: 293 KVGDVVSARLLFDQMKDRDTISWNT-----MIDGYV---HVSRMEDAFALFSEMPNRDAH 344
Query: 282 LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAED 341
++ YA G ++++ F + K ++ ++++ + +N + EA+ LF +M E
Sbjct: 345 SWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEG 404
Query: 342 LVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNI 401
P +LL A L L+LG +H ++K + ++ + +++ MY R G I
Sbjct: 405 EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-----PDVPVHNALITMYSRCGEI 459
Query: 402 SSARAVFDRMPVK-DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSA 460
+R +FD M +K +VI W +MI G+ HG EAL F M + + P+ +TF+S+L+A
Sbjct: 460 MESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Query: 461 CSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSR 520
C+H+GLV E + SM + IEP ++H++ +V++ G +EA+ II M PD
Sbjct: 520 CAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKT 579
Query: 521 IWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMS 580
+WGALL A +Y N L A+ + LEP+++ + LL N+ A G W+E ++R M
Sbjct: 580 VWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNME 639
Query: 581 EKDLKKKPGWSCIE 594
K +KK+ G S ++
Sbjct: 640 SKRIKKERGSSWVD 653
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 204/472 (43%), Gaps = 41/472 (8%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEP 142
N ++ ++ I AR +F+ + R+ V+W +MI+GY+ R ++ A LF+ M
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
T+I +C L ++ + S W N+++ YA E LLF
Sbjct: 104 TWNTMISGYVSCGGIRFLEEARKLFD-EMPSRDSFSW---NTMISGYAKNRRIGEALLLF 159
Query: 203 SEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNL 262
++ +R+ SW+ +I+ + G++ L +M + L +++ K L
Sbjct: 160 EKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDS-----SPLCALVAGLIKNERL 214
Query: 263 SKGEGV--HCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQL---------------FR 304
S+ V + +G D V +L+ Y + G+++ + L FR
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFR 274
Query: 305 EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKL 364
E K+ ++ +M+ +++ G + A LF QM+ D + W ++D G + +
Sbjct: 275 ERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI----SWNTMID-----GYVHV 325
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
R+ + LF+ + H +++ Y GN+ AR F++ P K ++W S+I
Sbjct: 326 SRMEDAFA---LFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIA 382
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
+ + EA+ F M +P+ T SLLSA +GLV+ + +
Sbjct: 383 AYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAS--TGLVNLRLGMQMHQIVVKTVI 440
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKT 536
P + H ++ ++ RCG + E+ I +M + + W A++ +GN +
Sbjct: 441 PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNAS 492
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 190/454 (41%), Gaps = 72/454 (15%)
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
N L G E +F ++ R+ +WN +IS Y +M + L + M +
Sbjct: 44 NKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVV 103
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQL 302
+WN +IS + CG + E L + D +++ YAK ++ ++ L
Sbjct: 104 TWNT-----MISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLL 158
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAED----LVIVPEIWRN--LLDAC 356
F ++ ++ ++ AM++GF QNG A+ LF++M +D +V + +N L +A
Sbjct: 159 FEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAA 218
Query: 357 ---ANLGALKLGRVVHGYLMKNLF-----NGPVEG------------------------- 383
G+L GR Y L G VE
Sbjct: 219 WVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFC 278
Query: 384 -NLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
N+ S++ Y++ G++ SAR +FD+M +D I+W +MI+G+ +A F+ M
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEM 338
Query: 443 MEHRMQPN--SVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTC----MVDL 496
PN + ++ ++S + G V E + Y+ E + HT ++
Sbjct: 339 ------PNRDAHSWNMMVSGYASVGNV-ELARHYF--------EKTPEKHTVSWNSIIAA 383
Query: 497 FGRCGMVKEALSIILKMVI---LPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNA 553
+ + KEA+ + ++M I PD +LL+AS N LG Q +++ +
Sbjct: 384 YEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDV 443
Query: 554 GYHTLLSNVKASAGRWNEVEELRREMSEKDLKKK 587
H L + + G E+ E RR E LK++
Sbjct: 444 PVHNALITMYSRCG---EIMESRRIFDEMKLKRE 474
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 233 bits (593), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 148/473 (31%), Positives = 258/473 (54%), Gaps = 15/473 (3%)
Query: 163 GTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSM 222
G Q+HGY VKSG+ + V N+++ Y+ + F + ++ +W+ +IS ++
Sbjct: 34 GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ 93
Query: 223 VGDMMRVAGLINEMQSLEGHSWNIETLTLVI-SAFAKCGNLSK---GEGVHCLVIKTGFS 278
+ +M + N+ V+ SA C LS+ G VHCL +KTG+
Sbjct: 94 NELPWMSLEFLKKMMA-----GNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYD 148
Query: 279 DDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM 337
DV + +SL+D YAKCG++ + ++F E+ ++ +T MM G+ Q G EA+ LF++
Sbjct: 149 ADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEA 208
Query: 338 QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR 397
E+L + + +++ CAN L+LGR +HG +K+ + + + +S++++Y +
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSS----FDSSSFVGSSLVSLYSK 264
Query: 398 GGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSL 457
G A VF+ +PVK++ W +M++ + H + ++ F M M+PN +TFL++
Sbjct: 265 CGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNV 324
Query: 458 LSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILP 517
L+ACSH+GLV EG + Y+ IEP H+ +VD+ GR G ++EAL +I M I P
Sbjct: 325 LNACSHAGLVDEG-RYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDP 383
Query: 518 DSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRR 577
+WGALL + V+ N L + A ++ EL P ++G H LSN A+ GR+ + + R+
Sbjct: 384 TESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARK 443
Query: 578 EMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
+ ++ KK+ G S +E + + F +G+ H +++EIY L L + G
Sbjct: 444 LLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAG 496
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 179/397 (45%), Gaps = 13/397 (3%)
Query: 53 LSSMRADA-VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVV 111
LSS R + + G H ++ GL L N +I+FY K +RR F+ +
Sbjct: 23 LSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSST 82
Query: 112 SWTSMIAGYISERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYA 170
+W+S+I+ + ++ + KM L P+ L ++C + ++G +H +
Sbjct: 83 TWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLS 142
Query: 171 VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVA 230
+K+G D V +S++ MYA G +F E+ +R+V +W+ ++ Y+ +G+
Sbjct: 143 MKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEAL 202
Query: 231 GLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCL-VIKTGFSDDVLQTSLLDF 289
L E E + N + + VIS A L G +H L + + S + +SL+
Sbjct: 203 WLFKEAL-FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSL 261
Query: 290 YAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW 349
Y+KCG + + Q+F E+ K+ AM+ + Q+ + I LF++M+ + +
Sbjct: 262 YSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITF 321
Query: 350 RNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFD 409
N+L+AC++ G + GR Y + +E S+++M R G + A V
Sbjct: 322 LNVLNACSHAGLVDEGR----YYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 410 RMPVKDVIA-WTSMIEGFGSHG----FGFEALKYFNL 441
MP+ + W +++ H F A K F L
Sbjct: 378 NMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFEL 414
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 136/279 (48%), Gaps = 6/279 (2%)
Query: 27 ALSTFKKMRQMGVPHDTFTFPVVNRALSSM-RADAVYGKMTHCVAIQMGLDLDLYFCNTM 85
+L KKM + D P ++ + + R D G+ HC++++ G D D++ +++
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDI--GRSVHCLSMKTGYDADVFVGSSL 157
Query: 86 IDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNS 144
+D Y KC I AR++FD M R+VV+W+ M+ GY A LF + E L N
Sbjct: 158 VDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVND 217
Query: 145 VTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSE 204
+ ++ C ST L +G QIHG ++KS V +S++ +Y+ G E +F+E
Sbjct: 218 YSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNE 277
Query: 205 INKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSK 264
+ +++ WN ++ Y+ +V L M+ L G N T V++A + G + +
Sbjct: 278 VPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMK-LSGMKPNFITFLNVLNACSHAGLVDE 336
Query: 265 GEGVHCLVIKTGFSD-DVLQTSLLDFYAKCGKLDISVQL 302
G + ++ D SL+D + G+L ++++
Sbjct: 337 GRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEV 375
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 266/527 (50%), Gaps = 41/527 (7%)
Query: 99 RRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCAS 157
+R+ D SW ++ R D++ M + P+S + +L+AC
Sbjct: 58 KRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKM 117
Query: 158 TPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILI 217
+ G IH A+K+G+ V+ ++ +Y+ G E + F +I +++ SWN L+
Sbjct: 118 ENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLL 177
Query: 218 SFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSK------------- 264
Y G++ + +++ + SWN L+IS++AK G++
Sbjct: 178 HGYLESGELDEARRVFDKIPEKDAVSWN-----LIISSYAKKGDMGNACSLFSAMPLKSP 232
Query: 265 -------GEGVHCLVIKTG--FSDDVLQT------SLLDFYAKCGKLDISVQLFREIHFK 309
G V+C +K + D + Q +++ Y K G + + +LFR + K
Sbjct: 233 ASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKK 292
Query: 310 SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRV 367
+ AM++ + QNG +A+ LF QM + I P+ +++ A + LG G
Sbjct: 293 DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTW 352
Query: 368 VHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFG 427
V Y+ ++ ++ + + TS++++Y++GG+ + A +F + KD +++++MI G G
Sbjct: 353 VESYITEH----GIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCG 408
Query: 428 SHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPAL 487
+G EA F M+E ++ PN VTF LLSA SHSGLV EG K + SMK +EP+
Sbjct: 409 INGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSA 467
Query: 488 DHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE 547
DH+ MVD+ GR G ++EA +I M + P++ +WGALL ASG++ N GE ++
Sbjct: 468 DHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVK 527
Query: 548 LEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIE 594
LE D GY + L+ + +S GRW++ +R + EK L K G S +E
Sbjct: 528 LETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 196/458 (42%), Gaps = 46/458 (10%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+++ +W +R +F + + M G+P + V RA M + V GK
Sbjct: 67 HDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKME-NMVDGKP 125
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H A++ GL +Y ++ Y + I A++ FD + ++ VSW S++ GY+
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 126 VSVACDLFNKMRVELEPNSVTLIV--------MLQACC------ASTPLNVGTQIHGYA- 170
+ A +F+K+ E + S LI+ M AC +P + I GY
Sbjct: 186 LDEARRVFDKIP-EKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVN 244
Query: 171 -----VKSGVLMDWSVKNSV-----LRMYADKGSTEEVELLFSEINKRDVASWNILISFY 220
+ KN V + Y G + E LF ++K+D ++ +I+ Y
Sbjct: 245 CREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACY 304
Query: 221 SMVGDMMRVAGLINEMQSLEGHSW---NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF 277
+ G L +M LE +S+ + TL+ V+SA ++ GN S G V + + G
Sbjct: 305 TQNGKPKDALKLFAQM--LERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGI 362
Query: 278 S-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQ 336
DD+L TSL+D Y K G + ++F ++ K ++ AM+ G NG EA +LF
Sbjct: 363 KIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTA 422
Query: 337 MQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETS----IL 392
M + + + LL A ++ G V GY FN + NL ++
Sbjct: 423 MIEKKIPPNVVTFTGLLSAYSHSGL-----VQEGY---KCFNSMKDHNLEPSADHYGIMV 474
Query: 393 NMYIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGSH 429
+M R G + A + MP++ + W +++ G H
Sbjct: 475 DMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLH 512
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 232 bits (591), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 157/532 (29%), Positives = 264/532 (49%), Gaps = 16/532 (3%)
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + L D YF + FY + AR++FD+ R V W S+I Y
Sbjct: 28 HSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQF 87
Query: 127 SVACDLFNK-MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
+ LF++ +R + P++ T + + S IHG A+ SG+ D +++
Sbjct: 88 TTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAI 147
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
++ Y+ G E LF I D+A WN++I Y G + L N MQ GH N
Sbjct: 148 VKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQH-RGHQPN 206
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFR 304
T+ + S L VH +K S + +L++ Y++C + + +F
Sbjct: 207 CYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFN 266
Query: 305 EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM----QAEDLVIVPEIWRNLLDACANLG 360
I + ++++G+ + G+ EA+ LF ++ + D V+V + L +CA L
Sbjct: 267 SISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIV----LGSCAELS 322
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWT 420
G+ VH Y+++ +E ++ + +++++MY + G + A ++F +P K+++++
Sbjct: 323 DSVSGKEVHSYVIRL----GLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFN 378
Query: 421 SMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWG 480
S+I G G HGF A + F ++E + P+ +TF +LL C HSGL+++G +I+ MK
Sbjct: 379 SLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Query: 481 FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEY 540
FGIEP +H+ MV L G G ++EA ++ + DS I GALL+ V+ N L E
Sbjct: 439 FGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEV 498
Query: 541 TAQRLLEL-EPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
A+ + + E + Y +LSNV A GRW+EVE LR +SE K PG S
Sbjct: 499 VAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGIS 550
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 162/360 (45%), Gaps = 4/360 (1%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN IR + QF + LS F ++ + D FT+ + R S D + H +A
Sbjct: 74 WNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSE-SFDTKGLRCIHGIA 132
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
I GL D + ++ Y K I A ++F + D+ W MI GY
Sbjct: 133 IVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGI 192
Query: 131 DLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY 189
+LFN M+ +PN T++ + + L V +H + +K + V +++ MY
Sbjct: 193 NLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMY 252
Query: 190 ADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETL 249
+ +F+ I++ D+ + + LI+ YS G+ L E++ + G + +
Sbjct: 253 SRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELR-MSGKKPDCVLV 311
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHF 308
+V+ + A+ + G+ VH VI+ G D+ + ++L+D Y+KCG L ++ LF I
Sbjct: 312 AIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE 371
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVV 368
K+ ++ +++ G +G A F ++ L+ + LL C + G L G+ +
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 187/441 (42%), Gaps = 38/441 (8%)
Query: 158 TPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILI 217
T LN ++H + KS + D + R YA LF +R V WN +I
Sbjct: 20 TRLNT-QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSII 78
Query: 218 SFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF 277
Y+ V L +++ + N T + F++ + +H + I +G
Sbjct: 79 RAYAKAHQFTTVLSLFSQILRSDTRPDNF-TYACLARGFSESFDTKGLRCIHGIAIVSGL 137
Query: 278 S-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQ 336
D + ++++ Y+K G + + +LF I M+ G+ G + + I LF
Sbjct: 138 GFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNL 197
Query: 337 MQAEDLVIVPEIWRNLLDACANLGALKLGRV----------VHGYLMK-NLFNGPVEGNL 385
MQ R C + AL G + VH + +K NL + +
Sbjct: 198 MQH----------RGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINL-----DSHS 242
Query: 386 HMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH 445
++ +++NMY R I+SA +VF+ + D++A +S+I G+ G EAL F +
Sbjct: 243 YVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS 302
Query: 446 RMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKE 505
+P+ V +L +C+ G K +S G+E + + ++D++ +CG++K
Sbjct: 303 GKKPDCVLVAIVLGSCAELSDSVSG-KEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKC 361
Query: 506 ALSIILKMVILPDSRI--WGALLAASGVYGNKTLGEYTAQRLLE--LEPDNAGYHTLLSN 561
A+S+ +P+ I + +L+ G++G + +LE L PD + LL
Sbjct: 362 AMSLFAG---IPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCT 418
Query: 562 VKASAGRWNEVEELRREMSEK 582
+G N+ +E+ M +
Sbjct: 419 C-CHSGLLNKGQEIFERMKSE 438
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 163/596 (27%), Positives = 289/596 (48%), Gaps = 12/596 (2%)
Query: 20 DLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDL 79
D + L+T + TFT V + ++ D + G + I++G ++
Sbjct: 178 DFASYAFPLTTHMAFEYVKPNSSTFTSLV---QVCAVLEDVLMGSSLNSQIIKLGYSDNV 234
Query: 80 YFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE 139
+++ Y C + ARR+FD + +RD V+W +MI G + + F M +
Sbjct: 235 VVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS 294
Query: 140 -LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEV 198
++P T ++L C ++G IH + S L D + N++L MY G E
Sbjct: 295 GVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREA 354
Query: 199 ELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAK 258
+F I+ ++ SWN +IS S G + + + + + T + ISA A+
Sbjct: 355 FYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Query: 259 CGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
G+ +H V K G+ V + T+LL Y K + + + ++F + + + M
Sbjct: 415 PERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEM 474
Query: 318 MSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLF 377
+ G + G+ A+ F +M E +++ AC+++ L+ G V H ++ F
Sbjct: 475 IVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGF 534
Query: 378 NGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK 437
+ + + ++++MY + G +A +F D+ W SM+ + HG +AL
Sbjct: 535 DCV----MSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALS 590
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLF 497
+F ++E+ P++VT+LSLL+ACSH G +G ++ MK GI+ H++CMV+L
Sbjct: 591 FFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLV 649
Query: 498 GRCGMVKEALSIILKMVILPD-SRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYH 556
+ G+V EAL +I + + + +W LL+A N +G Y A+++L+L+P++ H
Sbjct: 650 SKAGLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATH 709
Query: 557 TLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYG-FLSGDITHPE 611
LLSN+ A GRW +V E+RR++ K PG S IEV + F SGD ++PE
Sbjct: 710 ILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/474 (23%), Positives = 223/474 (47%), Gaps = 24/474 (5%)
Query: 80 YFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM--- 136
Y N +I YV+C + AR+VFD M R++V+ + A + +VS+ L +++
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVF---EYVSMGSSLHSQIIKL 79
Query: 137 -------RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGV---LMDWSVKNSVL 186
+ L + +++ + + C + T L QIH + +G N+++
Sbjct: 80 GSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 187 RMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
MY GS E+ +F ++ R+V S+N L S YS D A + + E N
Sbjct: 140 SMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNS 199
Query: 247 ETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFRE 305
T T ++ A ++ G ++ +IK G+SD+ V+QTS+L Y+ CG L+ + ++F
Sbjct: 200 STFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDC 259
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
++ + + M+ G ++N + + F+ M + + +L+ C+ LG+ LG
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
+++H ++ + +L ++ ++L+MY G++ A VF R+ ++++W S+I G
Sbjct: 320 KLIHARIIVS----DSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 426 FGSHGFGFEA-LKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
+GFG +A L Y L+ +P+ TF + +SA + G K+ + G E
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHG-KLLHGQVTKLGYE 434
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
++ T ++ ++ + E+ + ++ D +W ++ GN L
Sbjct: 435 RSVFVGTTLLSMYFK-NREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELA 487
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 177/411 (43%), Gaps = 13/411 (3%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ +AWN I + + L F+ M GV FT+ +V S + + ++ GK+
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL-GKLI 322
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H I DL N ++D Y C + A VF + + ++VSW S+I+G SE
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG-CSENGF 381
Query: 127 SVACDLFNKMRVEL---EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
L + + + P+ T + A G +HG K G V
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGT 441
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
++L MY E + +F + +RDV W +I +S +G+ EM + S
Sbjct: 442 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS 501
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQT--SLLDFYAKCGKLDISVQ 301
+L+ VI A + L +GE HCL I+TGF D V+ +L+D Y K GK + +
Sbjct: 502 DGF-SLSSVIGACSDMAMLRQGEVFHCLAIRTGF-DCVMSVCGALVDMYGKNGKYETAET 559
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+F +M+ + Q+G +A++ F+Q+ + + +LL AC++ G+
Sbjct: 560 IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGS 619
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP 412
G+ +L + ++ + ++N+ + G + A + ++ P
Sbjct: 620 TLQGK----FLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSP 666
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 137/371 (36%), Positives = 212/371 (57%), Gaps = 14/371 (3%)
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIH 307
+ +S+ K +L G +H LV K GF+ + +QTSL+ FY+ G +D + Q+F E
Sbjct: 69 FAIKVSSAQKASSLD-GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETP 127
Query: 308 FKSYITL-GAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
K I L AM+S + +N + +EAI LF++M+AE + + I L ACA+LGA+++G
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF 426
++ +K + +L + S+LNMY++ G AR +FD KDV +TSMI G+
Sbjct: 188 EIYSRSIKR--KRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGY 245
Query: 427 GSHGFGFEALKYFNLM------MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWG 480
+G E+L+ F M + + PN VTF+ +L ACSHSGLV EG + + SM
Sbjct: 246 ALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMD 305
Query: 481 FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEY 540
+ ++P H CMVDLF R G +K+A I +M I P++ IW LL A ++GN LGE
Sbjct: 306 YNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEE 365
Query: 541 TAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSY 600
+R+ EL+ D+ G + LSN+ AS G W+E ++R + ++ + PG S IE+ +
Sbjct: 366 VQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM---PGKSWIELGSIIN 422
Query: 601 GFLSGDITHPE 611
F+SG + E
Sbjct: 423 EFVSGPDNNDE 433
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 198/441 (44%), Gaps = 60/441 (13%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFK-KMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
++ N T++ +++ G+ AL F+ + RQ D+F+ + S+ +A ++ G+
Sbjct: 27 KSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQ 86
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR-DVVSWTSMIAGYISER 124
H + ++G + + +++ FY + AR+VFD + ++V WT+MI+ Y
Sbjct: 87 IHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENE 146
Query: 125 HVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG--VLMDWSV 181
+ A +LF +M E +E + V + V L AC + +G +I+ ++K + MD ++
Sbjct: 147 NSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTL 206
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
+NS+L MY G TE+ LF E ++DV ++ +I Y++ G L +M++++
Sbjct: 207 RNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQ 266
Query: 242 HSWNIETLTLV--ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDIS 299
+ T V I C H +++ G ++ ++D+ K
Sbjct: 267 SQDTVITPNDVTFIGVLMACS--------HSGLVEEGKRH--FKSMIMDYNLKP------ 310
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
RE HF G M+ F ++G +A QM + + IWR LL AC+
Sbjct: 311 ----REAHF------GCMVDLFCRSGHLKDAHEFINQMPIKPNTV---IWRTLLGACSLH 357
Query: 360 GALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFD---------- 409
G ++LG V + + ++ + Y+ NI +++ ++D
Sbjct: 358 GNVELGEEVQRRIFE------------LDRDHVGDYVALSNIYASKGMWDEKSKMRDRVR 405
Query: 410 --RMPVKDVIAWTSMIEGFGS 428
RMP K I S+I F S
Sbjct: 406 KRRMPGKSWIELGSIINEFVS 426
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRA----D 59
E N + W I + + A+ FK+M + D V A + + A +
Sbjct: 128 EKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGE 187
Query: 60 AVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
+Y + + + L +DL N++++ YVK AR++FD + +DV ++TSMI G
Sbjct: 188 EIYSR---SIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFG 244
Query: 120 YISERHVSVACDLFNKMR-------VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVK 172
Y + +LF KM+ + PN VT I +L AC S + G + K
Sbjct: 245 YALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKR----HFK 300
Query: 173 SGVLMDWSVK 182
S ++MD+++K
Sbjct: 301 S-MIMDYNLK 309
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 239/435 (54%), Gaps = 15/435 (3%)
Query: 198 VELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFA 257
V+LL SEIN + ++L S + G ++ L G + T ++ +A
Sbjct: 119 VQLLSSEINPNEFTFSSLLKSCSTKSGKLIHTHVLKF------GLGIDPYVATGLVDVYA 172
Query: 258 KCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
K G++ + V + + V T+++ YAK G ++ + LF + + ++ M
Sbjct: 173 KGGDVVSAQKVFDRMPERSL---VSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVM 229
Query: 318 MSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR-NLLDACANLGALKLGRVVHGYLMKNL 376
+ G+ Q+G +A+ LFQ++ AE EI L AC+ +GAL+ GR +H ++
Sbjct: 230 IDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVK--- 286
Query: 377 FNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEAL 436
+ + N+ + T +++MY + G++ A VF+ P KD++AW +MI G+ HG+ +AL
Sbjct: 287 -SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDAL 345
Query: 437 KYFNLMME-HRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVD 495
+ FN M +QP +TF+ L AC+H+GLV+EG +I+ SM +GI+P ++H+ C+V
Sbjct: 346 RLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVS 405
Query: 496 LFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGY 555
L GR G +K A I M + DS +W ++L + ++G+ LG+ A+ L+ L N+G
Sbjct: 406 LLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGI 465
Query: 556 HTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEI 615
+ LLSN+ AS G + V ++R M EK + K+PG S IE++ + F +GD H +++EI
Sbjct: 466 YVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEI 525
Query: 616 YAALCTLSRVTQDFG 630
Y L +S + G
Sbjct: 526 YTMLRKISERIKSHG 540
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 38/257 (14%)
Query: 42 DTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVK---------- 91
+ FTF + ++ S+ GK+ H ++ GL +D Y ++D Y K
Sbjct: 129 NEFTFSSLLKSCSTKS-----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKV 183
Query: 92 -----------------CWC----IGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
C+ + AR +FD M RD+VSW MI GY + A
Sbjct: 184 FDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDAL 243
Query: 131 DLFNKMRVE--LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
LF K+ E +P+ +T++ L AC L G IH + S + ++ V ++ M
Sbjct: 244 MLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDM 303
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
Y+ GS EE L+F++ ++D+ +WN +I+ Y+M G L NEMQ + G T
Sbjct: 304 YSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDIT 363
Query: 249 LTLVISAFAKCGNLSKG 265
+ A A G +++G
Sbjct: 364 FIGTLQACAHAGLVNEG 380
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 4/163 (2%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPH-DTFTFPVVNRALSSMRADAVYGKM 65
+ ++WN+ I + G + AL F+K+ G P D T A S + A G+
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALET-GRW 280
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H + L++ C +ID Y KC + A VF+ +D+V+W +MIAGY +
Sbjct: 281 IHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGY 340
Query: 126 VSVACDLFNKMR--VELEPNSVTLIVMLQACCASTPLNVGTQI 166
A LFN+M+ L+P +T I LQAC + +N G +I
Sbjct: 341 SQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRI 383
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 170/552 (30%), Positives = 277/552 (50%), Gaps = 60/552 (10%)
Query: 109 DVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIH 167
+V + +MI+ S ++ L++ M R + P+ T + +++A S+ L+ QIH
Sbjct: 99 NVFVYNTMISAVSSSKNECFG--LYSSMIRHRVSPDRQTFLYLMKA---SSFLSEVKQIH 153
Query: 168 GYAVKSGVL-MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDM 226
+ + SG L + + NS+++ Y + G+ E +F+ + DV+S+N++I Y+ G
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFS 213
Query: 227 MRVAGLINEMQS--LEGHSWNIETLTLVISAFAKCGNLSK---GEGVHCLVIKTG---FS 278
+ L +M S +E + V+S CG+LS G+GVH + + G S
Sbjct: 214 LEALKLYFKMVSDGIEPDEYT------VLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSS 267
Query: 279 DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ 338
+ +L +LLD Y KC + ++ + F + K + M+ GF++ G A A+F QM
Sbjct: 268 NLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP 327
Query: 339 AEDLV---------------------------IVPEIWRN------LLDACANLGALKLG 365
DLV IV ++ + L+ AN G L G
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
R VHG +++ ++G+ + +++++MY + G I A VF KDV WTSMI G
Sbjct: 388 RWVHGLVIRL----QLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITG 443
Query: 426 FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEP 485
HG G +AL+ F M E + PN+VT L++L+ACSHSGLV EG ++ MK FG +P
Sbjct: 444 LAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDP 503
Query: 486 ALDHHTCMVDLFGRCGMVKEALSIIL-KMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
+H+ +VDL R G V+EA I+ KM + P +WG++L+A + E
Sbjct: 504 ETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTE 563
Query: 545 LLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGW-SCIEVKGVSYGFL 603
LL+LEP+ G + LLSN+ A+ GRW ++ R M + +KK G+ S + V+G+
Sbjct: 564 LLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVA 623
Query: 604 SGDITHPEAEEI 615
+ HP EI
Sbjct: 624 AEKQNHPRWTEI 635
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/389 (27%), Positives = 180/389 (46%), Gaps = 41/389 (10%)
Query: 64 KMTHCVAIQMG-LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
K HC I G L L Y N+++ FY++ G A +VF M H DV S+ MI GY
Sbjct: 150 KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK 209
Query: 123 ERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG------- 174
+ A L+ KM + +EP+ T++ +L C + + +G +HG+ + G
Sbjct: 210 QGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNL 269
Query: 175 ----VLMDWSVK----------------------NSVLRMYADKGSTEEVELLFSEINKR 208
L+D K N+++ + G E + +F ++ KR
Sbjct: 270 ILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR 329
Query: 209 DVASWNILISFYSMVG-DMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
D+ SWN L+ YS G D V L EM +E + T+ +IS A G LS G
Sbjct: 330 DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRW 389
Query: 268 VHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGS 326
VH LVI+ D L ++L+D Y KCG ++ + +F+ K +M++G +G+
Sbjct: 390 VHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGN 449
Query: 327 FMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLH 386
+A+ LF +MQ E + +L AC++ G ++ G V + MK+ F E +
Sbjct: 450 GQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNH-MKDKFGFDPETEHY 508
Query: 387 METSILNMYIRGGNISSARAVFD-RMPVK 414
S++++ R G + A+ + +MP++
Sbjct: 509 --GSLVDLLCRAGRVEEAKDIVQKKMPMR 535
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 151/362 (41%), Gaps = 83/362 (22%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPH---DTFTFPVVNRALS--SMRADAVYGKM 65
WN ++ +++LG F A F +M PH +F +V A S+ A +Y KM
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARM-----PHPDVSSFNVMIVGYAKQGFSLEALKLYFKM 223
Query: 66 T-------------------HCVAIQMGLDL-------------DLYFCNTMIDFYVKCW 93
H I++G + +L N ++D Y KC
Sbjct: 224 VSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCK 283
Query: 94 CIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA------------------------ 129
G A+R FD M +D+ SW +M+ G++ + A
Sbjct: 284 ESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSK 343
Query: 130 --CD------LFNKMRV--ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
CD LF +M + +++P+ VT++ ++ + L+ G +HG ++ + D
Sbjct: 344 KGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDA 403
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
+ ++++ MY G E ++F ++DVA W +I+ + G+ + L MQ
Sbjct: 404 FLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE- 462
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHC---LVIKTGFSDDVLQT-SLLDFYAKCGK 295
EG + N TL V++A + G + EG+H + K GF + SL+D + G+
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVE--EGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGR 520
Query: 296 LD 297
++
Sbjct: 521 VE 522
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 226 bits (577), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 248/522 (47%), Gaps = 85/522 (16%)
Query: 110 VVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACC--ASTPLNVGTQI 166
VSWTS I ++ A F+ M + +EPN +T I +L C S +G +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 167 HGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDM 226
HGYA K G +++ V +I YS G
Sbjct: 96 HGYACKLG------------------------------LDRNHVMVGTAIIGMYSKRGRF 125
Query: 227 MRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSL 286
+ + + M+ +WN ++
Sbjct: 126 KKARLVFDYMEDKNSVTWN---------------------------------------TM 146
Query: 287 LDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ----AEDL 342
+D Y + G++D + ++F ++ + I+ AM++GF++ G EA+ F++MQ D
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 343 VIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNIS 402
V + L+AC NLGAL G VH Y++ F + N+ + S++++Y R G +
Sbjct: 207 VAIIAA----LNACTNLGALSFGLWVHRYVLSQDF----KNNVRVSNSLIDLYCRCGCVE 258
Query: 403 SARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
AR VF M + V++W S+I GF ++G E+L YF M E +P++VTF L+ACS
Sbjct: 259 FARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACS 318
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIW 522
H GLV EG + + MK + I P ++H+ C+VDL+ R G +++AL ++ M + P+ +
Sbjct: 319 HVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVI 378
Query: 523 GALLAASGVYGNK-TLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSE 581
G+LLAA +GN L E + L +L + + +LSN+ A+ G+W ++RR+M
Sbjct: 379 GSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKG 438
Query: 582 KDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLS 623
LKK+PG+S IE+ + F++GD H E I L +S
Sbjct: 439 LGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYIREVLELIS 480
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 155/356 (43%), Gaps = 38/356 (10%)
Query: 8 TMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA-VYGKMT 66
T++W I G+ A F M GV + TF + + + G +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 67 HCVAIQMGLDLD----------------------LYF----------CNTMIDFYVKCWC 94
H A ++GLD + L F NTMID Y++
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 95 IGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQA 153
+ A ++FD M RD++SWT+MI G++ + + A F +M++ ++P+ V +I L A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 154 CCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASW 213
C L+ G +H Y + + V NS++ +Y G E +F + KR V SW
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 214 NILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG-EGVHCLV 272
N +I ++ G+ +MQ +G + T T ++A + G + +G +
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQE-KGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMK 334
Query: 273 IKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFK-SYITLGAMMSGFIQNGS 326
S + L+D Y++ G+L+ +++L + + K + + +G++++ +G+
Sbjct: 335 CDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGN 390
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 195/348 (56%), Gaps = 18/348 (5%)
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
T++L YA+ G + +V LF ++ + + A+++ QNG F+EA++LF++M E
Sbjct: 197 TAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINE--- 253
Query: 344 IVPEIWRN------LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR 397
P I N +L ACA G L+L + +H + + + ++ + S++++Y +
Sbjct: 254 --PSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRR----DLSSDVFVSNSLVDLYGK 307
Query: 398 GGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMME---HRMQPNSVTF 454
GN+ A +VF K + AW SMI F HG EA+ F MM+ + ++P+ +TF
Sbjct: 308 CGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITF 367
Query: 455 LSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV 514
+ LL+AC+H GLVS+G + M FGIEP ++H+ C++DL GR G EAL ++ M
Sbjct: 368 IGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMK 427
Query: 515 ILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEE 574
+ D IWG+LL A ++G+ L E + L+ L P+N GY +++N+ G W E
Sbjct: 428 MKADEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARR 487
Query: 575 LRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTL 622
R+ + ++ K PGWS IE+ + F S D +HPE EEIY L +L
Sbjct: 488 ARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 172/412 (41%), Gaps = 51/412 (12%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWC-IGCARRVFDLMLHRDVVSWTSMIAGYIS 122
K I GL + C ++ F C + AR +FD + + +++ Y S
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSS 100
Query: 123 ER--HVSVACDLFNKM--RVELEPNSVTLIVMLQAC-----CASTPLNVGTQI-----HG 168
H S A F M R PN ++L++ STPL V T + H
Sbjct: 101 SLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPL-VHTHLFKSGFHL 159
Query: 169 YAVKSGVLM------------------DWSVKNSV-----LRMYADKGSTEEVELLFSEI 205
Y V L+ + S +N V L YA G LF ++
Sbjct: 160 YVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDM 219
Query: 206 NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG 265
+RDV SWN +++ + G + L M + N T+ V+SA A+ G L
Sbjct: 220 PERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLA 279
Query: 266 EGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQN 324
+G+H + S DV + SL+D Y KCG L+ + +F+ KS +M++ F +
Sbjct: 280 KGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALH 339
Query: 325 GSFMEAIALFQQMQAEDLV-IVPE--IWRNLLDACANLGALKLGRVVHGY--LMKNLFNG 379
G EAIA+F++M ++ I P+ + LL+AC + G + GR GY LM N F
Sbjct: 340 GRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGR---GYFDLMTNRFG- 395
Query: 380 PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGSHG 430
+E + ++++ R G A V M +K D W S++ HG
Sbjct: 396 -IEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHG 446
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 106/200 (53%), Gaps = 8/200 (4%)
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF 426
V H L + LF+ E N+ T++L+ Y R G+IS+A A+F+ MP +DV +W +++
Sbjct: 175 VSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAAC 234
Query: 427 GSHGFGFEALKYFNLMM-EHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEP 485
+G EA+ F M+ E ++PN VT + +LSAC+ +G + + K ++ + +
Sbjct: 235 TQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL-QLAKGIHAFAYRRDLSS 293
Query: 486 ALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRL 545
+ +VDL+G+CG ++EA S + KM W +++ ++G + +
Sbjct: 294 DVFVSNSLVDLYGKCGNLEEA-SSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352
Query: 546 LEL-----EPDNAGYHTLLS 560
++L +PD+ + LL+
Sbjct: 353 MKLNINDIKPDHITFIGLLN 372
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 170/662 (25%), Positives = 297/662 (44%), Gaps = 110/662 (16%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G + H +I+ G L N +++ Y K + AR VFD ML R+V SW ++IA Y+
Sbjct: 7 GFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVK 66
Query: 123 ERHVSVACDLFN-------------------------------------KMRVELEPNSV 145
+V A +LF K + ++ +
Sbjct: 67 FNNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 146 TLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFS-- 203
T+ M++ T + G Q+HG VK+G +S++ MY+ G +EV +F+
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 204 ---------------------EINK-----------RDVASWNILISFYSMVGDMMRVAG 231
+I+K D SWN LI+ Y+ G
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK 246
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFY 290
+ M+ G W+ + V++ + +L G+ VH V+K G +S+ + + ++D Y
Sbjct: 247 MAVSMEE-NGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVY 305
Query: 291 AKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVI------ 344
KCG + + F + + +M+ G+ G +EA LF + ++LV+
Sbjct: 306 CKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFL 365
Query: 345 ----------VPEIWR----------------NLLDACANLGALKLGRVVHGYLMKNLFN 378
V E+ R ++L AC+ ++ G+ +HG+ ++
Sbjct: 366 GYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT--- 422
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKY 438
+ + + T+ ++MY + GN+ A +FD +D + + +MI G HG ++ ++
Sbjct: 423 -GILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQH 481
Query: 439 FNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFG 498
F M E +P+ +TF++LLSAC H GLV EG K + SM + I P H+TCM+DL+G
Sbjct: 482 FEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYG 541
Query: 499 RCGMVKEALSIILKM-VILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHT 557
+ + +A+ ++ + + D+ I GA L A N L + ++LL +E N +
Sbjct: 542 KAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYI 601
Query: 558 LLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYA 617
++N AS+GRW+E++ +R +M K+L+ G S + + F S DI+H E E IYA
Sbjct: 602 QIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYA 661
Query: 618 AL 619
L
Sbjct: 662 ML 663
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 168/378 (44%), Gaps = 43/378 (11%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E N+T++WN I + G AL M + G+ D +F V LSS+++ + G
Sbjct: 221 ELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKI-G 279
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKC------------WCIGC-------------- 97
K H ++ G + + + ++D Y KC + G
Sbjct: 280 KEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQ 339
Query: 98 -----ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVEL--EPNSVTLIVM 150
A+R+FD + +++V WT+M GY++ R +L P+S+ ++ +
Sbjct: 340 GKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSV 399
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDV 210
L AC + G +IHG+++++G+LMD + + + MY+ G+ E E +F +RD
Sbjct: 400 LGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDT 459
Query: 211 ASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHC 270
+N +I+ + G + +M G + T ++SA G + +GE
Sbjct: 460 VMYNAMIAGCAHHGHEAKSFQHFEDMTE-GGFKPDEITFMALLSACRHRGLVLEGEKYFK 518
Query: 271 LVIKT-GFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHF--KSYITLGAMMSGFIQNGS 326
+I+ S + T ++D Y K +LD +++L I K + LGA F+ S
Sbjct: 519 SMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGA----FLNACS 574
Query: 327 FMEAIALFQQMQAEDLVI 344
+ + L ++++ + LVI
Sbjct: 575 WNKNTELVKEVEEKLLVI 592
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 260/515 (50%), Gaps = 25/515 (4%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYIS----ERHVSVACDLFNKMRVELEPNSVTLIVMLQA 153
A +FD M RDVVSW +MI+G +S E + V F+ R E+ P T ++
Sbjct: 89 ALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRV---FFDMQRWEIRPTEFTFSILASL 145
Query: 154 CCASTPLNVGTQIHGYAVKSGV----LMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
T + G QIHG A+ SGV L+ W NSV+ MY G + +F + RD
Sbjct: 146 V---TCVRHGEQIHGNAICSGVSRYNLVVW---NSVMDMYRRLGVFDYALSVFLTMEDRD 199
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
V SWN LI S G+ M+ +E + T+++V+S + LSKG+
Sbjct: 200 VVSWNCLILSCSDSGNKEVALDQFWLMREMEIQP-DEYTVSMVVSICSDLRELSKGKQAL 258
Query: 270 CLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
L IK GF S+ ++ + +D ++KC +LD SV+LFRE+ + +M+ + +
Sbjct: 259 ALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGE 318
Query: 329 EAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
+A+ LF + + + ++L + N L G VH ++K F + + +
Sbjct: 319 DALRLFILAMTQSVRPDKFTFSSVLSS-MNAVMLDHGADVHSLVIKLGF----DLDTAVA 373
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFN-LMMEHRM 447
TS++ MY + G++ A VF + KD+I W ++I G + E+L FN L+M +
Sbjct: 374 TSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSL 433
Query: 448 QPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEAL 507
+P+ VT + +L AC ++G V+EG +I+ SM+ G+ P +H+ C+++L R GM+ EA
Sbjct: 434 KPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAK 493
Query: 508 SIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAG 567
I K+ P S IW +L AS G+ L E A+ +LE EP ++ + +L +
Sbjct: 494 DIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTW 553
Query: 568 RWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGF 602
RW +LR M+E LK G S I ++ + F
Sbjct: 554 RWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSF 588
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 189/419 (45%), Gaps = 17/419 (4%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E + ++WN I V G + F M++ + FTF ++ ++ +R
Sbjct: 95 EMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVR---- 150
Query: 62 YGKMTHCVAIQMGLD-LDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+G+ H AI G+ +L N+++D Y + A VF M RDVVSW +I
Sbjct: 151 HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSC 210
Query: 121 ISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
+ VA D F MR +E++P+ T+ +++ C L+ G Q +K G L +
Sbjct: 211 SDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNS 270
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYS--MVGDMMRVAGLINEMQ 237
V + + M++ ++ LF E+ K D N +I YS G+ ++ Q
Sbjct: 271 IVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQ 330
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKL 296
S+ + ++ ++A L G VH LVIK GF D + TSL++ Y K G +
Sbjct: 331 SVRPDKFTFSSVLSSMNAVM----LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSV 386
Query: 297 DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI-WRNLLDA 355
D+++ +F + K I ++ G +N +E++A+F Q+ + + +L A
Sbjct: 387 DLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVA 446
Query: 356 CANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
C G + G + + K +G GN H I+ + R G I+ A+ + D++P +
Sbjct: 447 CCYAGFVNEGIQIFSSMEKA--HGVNPGNEHY-ACIIELLCRVGMINEAKDIADKIPFE 502
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 141/342 (41%), Gaps = 64/342 (18%)
Query: 268 VHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGS 326
VH +++ GF L Y K G + ++QLF +I K+ IT + G +NG
Sbjct: 26 VHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGY 85
Query: 327 FMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG-------------------------- 360
A+ LF +M D+V W ++ + G
Sbjct: 86 LNNALDLFDEMPERDVV----SWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 361 ------ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
++ G +HG + +G NL + S+++MY R G A +VF M +
Sbjct: 142 LASLVTCVRHGEQIHG---NAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDR 198
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCK-I 473
DV++W +I G AL F LM E +QP+ T ++S CS +S+G + +
Sbjct: 199 DVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQAL 258
Query: 474 YYSMKWGFGIEPALDHHTCM---VDLFGRCGMVKEALSIILKMVILPDSRIWGALLAAS- 529
+K GF L + + +D+F +C + +++ + ++ W ++L S
Sbjct: 259 ALCIKMGF-----LSNSIVLGAGIDMFSKCNRLDDSVKLFREL------EKWDSVLCNSM 307
Query: 530 -GVYGNKTLGEYTAQRLLEL------EPDNAGYHTLLSNVKA 564
G Y GE A RL L PD + ++LS++ A
Sbjct: 308 IGSYSWHCCGE-DALRLFILAMTQSVRPDKFTFSSVLSSMNA 348
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 145/500 (29%), Positives = 247/500 (49%), Gaps = 23/500 (4%)
Query: 101 VFDLMLHRDVVSWTSMIAGYISE----RHVSVACDLFNKMRVEL-EPNSVTLIVMLQACC 155
VF+ + W +I GY ++ VS+ L MR L P+ T ++++ C
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSI---LMRMMRTGLARPDEYTFPLVMKVCS 121
Query: 156 ASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNI 215
+ + VG+ +HG ++ G D V S + Y +F E+ +R+ SW
Sbjct: 122 NNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTA 181
Query: 216 LISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT 275
L+ Y G++ + + M SWN ++ K G+L + + + K
Sbjct: 182 LVVAYVKSGELEEAKSMFDLMPERNLGSWNA-----LVDGLVKSGDLVNAKKLFDEMPKR 236
Query: 276 GFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQ 335
D + TS++D YAK G + + LF E A++ G+ QNG EA +F
Sbjct: 237 ---DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFS 293
Query: 336 QMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK--NLFNGPVEGNLHMETSILN 393
+M A+++ I L+ AC+ +G +L V YL + N F+ + ++ ++++
Sbjct: 294 EMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-----SHYVVPALID 348
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
M + G++ A +F+ MP +D++++ SM+EG HG G EA++ F M++ + P+ V
Sbjct: 349 MNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
F +L C S LV EG + + M+ + I + DH++C+V+L R G +KEA +I M
Sbjct: 409 FTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSM 468
Query: 514 VILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVE 573
+ WG+LL ++GN + E A+ L ELEP +AG + LLSN+ A+ RW +V
Sbjct: 469 PFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVA 528
Query: 574 ELRREMSEKDLKKKPGWSCI 593
LR +M+E + K G S I
Sbjct: 529 HLRDKMNENGITKICGRSWI 548
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 194/429 (45%), Gaps = 20/429 (4%)
Query: 8 TMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPH-DTFTFPVVNRALSSMRADAVYGKMT 66
T WN I+ + + F +S +M + G+ D +TFP+V + S+ G
Sbjct: 74 TYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSN-NGQVRVGSSV 132
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + +++G D D+ + +DFY KC + AR+VF M R+ VSWT+++ Y+ +
Sbjct: 133 HGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGEL 192
Query: 127 SVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVL 186
A +F+ M E N + ++ S L ++ K ++ S++
Sbjct: 193 EEAKSMFDLMP---ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDII----SYTSMI 245
Query: 187 RMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM--QSLEGHSW 244
YA G LF E DV +W+ LI Y+ G + +EM ++++ +
Sbjct: 246 DGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEF 305
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIK--TGFSDDVLQTSLLDFYAKCGKLDISVQL 302
+ ++SA ++ G E V + + FS + +L+D AKCG +D + +L
Sbjct: 306 ---IMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKL 362
Query: 303 FREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGAL 362
F E+ + ++ +MM G +G EAI LF++M E +V + +L C +
Sbjct: 363 FEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLV 422
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTS 421
+ G + + LM+ ++ + + + I+N+ R G + A + MP + AW S
Sbjct: 423 EEG-LRYFELMRKKYS--ILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGS 479
Query: 422 MIEGFGSHG 430
++ G HG
Sbjct: 480 LLGGCSLHG 488
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 223 bits (569), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 219/414 (52%), Gaps = 12/414 (2%)
Query: 211 ASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHC 270
++WN+L YS + + +EM+ G N T ++ A A L+ G +
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKR-RGIKPNKLTFPFLLKACASFLGLTAGRQIQV 137
Query: 271 LVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFME 329
V+K GF DV + +L+ Y C K + ++F E+ ++ ++ ++M+ ++NG
Sbjct: 138 EVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNL 197
Query: 330 AIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMET 389
F +M + LL AC G L LG++VH +M +E N + T
Sbjct: 198 VFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVR----ELELNCRLGT 251
Query: 390 SILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM-EHRMQ 448
++++MY + G + AR VF+RM K+V W++MI G +GF EAL+ F+ MM E ++
Sbjct: 252 ALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVR 311
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALS 508
PN VTFL +L ACSH+GLV +G K ++ M+ I+P + H+ MVD+ GR G + EA
Sbjct: 312 PNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYD 371
Query: 509 IILKMVILPDSRIWGALLAASGVY---GNKTLGEYTAQRLLELEPDNAGYHTLLSNVKAS 565
I KM PD+ +W LL+A ++ ++ +GE +RL+ELEP +G +++N A
Sbjct: 372 FIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAE 431
Query: 566 AGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
A W E E+RR M E +KK G SC+E+ G + F SG E IY L
Sbjct: 432 ARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYVSIYELL 485
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 149/349 (42%), Gaps = 36/349 (10%)
Query: 10 AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCV 69
WN+ R + ++ + +M++ G+ + TFP + +A +S G+
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLG-LTAGRQIQVE 138
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVA 129
++ G D D+Y N +I Y C AR+VFD M R+VVSW S++ + +++
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 130 CDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRM 188
+ F +M P+ T++V+L AC + L++G +H + + ++ + +++ M
Sbjct: 199 FECFCEMIGKRFCPDETTMVVLLSACGGN--LSLGKLVHSQVMVRELELNCRLGTALVDM 256
Query: 189 YADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
YA G E L+F + ++V +W+ +I + G L ++M N T
Sbjct: 257 YAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVT 316
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHF 308
GV C TG DD + ++ + K+ + IH+
Sbjct: 317 FL----------------GVLCACSHTGLVDDGYK-----YFHEMEKIHKIKPMM--IHY 353
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA 357
GAM+ + G EA ++M E +V WR LL AC+
Sbjct: 354 ------GAMVDILGRAGRLNEAYDFIKKMPFEPDAVV---WRTLLSACS 393
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 152/322 (47%), Gaps = 10/322 (3%)
Query: 112 SWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYA 170
+W + GY S + ++++M R ++PN +T +L+AC + L G QI
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 171 VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVA 230
+K G D V N+++ +Y T + +F E+ +R+V SWN +++ G + V
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVF 199
Query: 231 GLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDF 289
EM G + + T+V+ A GNLS G+ VH V+ + L T+L+D
Sbjct: 200 ECFCEMI---GKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELELNCRLGTALVDM 256
Query: 290 YAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI- 348
YAK G L+ + +F + K+ T AM+ G Q G EA+ LF +M E V +
Sbjct: 257 YAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVT 316
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
+ +L AC++ G + G + Y + ++ + +++++ R G ++ A
Sbjct: 317 FLGVLCACSHTGLVDDG---YKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFI 373
Query: 409 DRMPVK-DVIAWTSMIEGFGSH 429
+MP + D + W +++ H
Sbjct: 374 KKMPFEPDAVVWRTLLSACSIH 395
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 216/394 (54%), Gaps = 6/394 (1%)
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+F + R++ SWNI+I +S G + L M + TL L++ A +
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 261 NLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMS 319
G+ +H L +K GFS + +S L+ Y GKL + +LF ++ + + AM
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 320 GFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNG 379
G++Q G M +A+F++M + + +LL AC LGALK G+ VHG+ ++
Sbjct: 209 GYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCL 268
Query: 380 PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYF 439
L++ +I +MY++ + A VF M +DVI+W+S+I G+G G + K F
Sbjct: 269 ----GLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 440 NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGR 499
+ M++ ++PN+VTFL +LSAC+H GLV E +Y+ + + I P L H+ + D R
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACAHGGLV-EKSWLYFRLMQEYNIVPELKHYASVADCMSR 383
Query: 500 CGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLL 559
G+++EA + M + PD + GA+L+ VYGN +GE A+ L++L+P A Y+ L
Sbjct: 384 AGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKPRKASYYVTL 443
Query: 560 SNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
+ + ++AGR++E E LR+ M EK + K PG S I
Sbjct: 444 AGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 153/319 (47%), Gaps = 6/319 (1%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKM-RQMGVPHDTFTFPVVNRALSSMRADAVYGK 64
N +WN+ I G ++ F +M R+ V D FT P++ RA S+ R +A G
Sbjct: 96 RNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR-EAKSGD 154
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
+ H + +++G L+ + ++ YV + AR++FD M RD V +T+M GY+ +
Sbjct: 155 LIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQG 214
Query: 125 HVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
+ +F +M +SV ++ +L AC L G +HG+ ++ + ++ N
Sbjct: 215 EAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGN 274
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
++ MY + +F +++RDV SW+ LI Y + GD++ L +EM EG
Sbjct: 275 AITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLK-EGIE 333
Query: 244 WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQL 302
N T V+SA A G + K L+ + ++ S+ D ++ G L+ + +
Sbjct: 334 PNAVTFLGVLSACAHGGLVEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKF 393
Query: 303 FREIHFKS-YITLGAMMSG 320
++ K +GA++SG
Sbjct: 394 LEDMPVKPDEAVMGAVLSG 412
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 140/320 (43%), Gaps = 14/320 (4%)
Query: 101 VFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE--LEPNSVTLIVMLQACCAST 158
VF M +R++ SW +I + S + DLF +M E + P+ TL ++L+AC AS
Sbjct: 89 VFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASR 148
Query: 159 PLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILIS 218
G IH +K G V ++++ MY D G LF ++ RD + +
Sbjct: 149 EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFG 208
Query: 219 FYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT--- 275
Y G+ M + EM G + + + ++ A + G L G+ VH I+
Sbjct: 209 GYVQQGEAMLGLAMFREM-GYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSC 267
Query: 276 -GFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALF 334
G + L ++ D Y KC LD + +F + + I+ +++ G+ +G + + LF
Sbjct: 268 LGLN---LGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLF 324
Query: 335 QQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNM 394
+M E + + +L ACA+ G L ++ LM+ P L S+ +
Sbjct: 325 DEMLKEGIEPNAVTFLGVLSACAH-GGLVEKSWLYFRLMQEYNIVP---ELKHYASVADC 380
Query: 395 YIRGGNISSARAVFDRMPVK 414
R G + A + MPVK
Sbjct: 381 MSRAGLLEEAEKFLEDMPVK 400
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 244/444 (54%), Gaps = 23/444 (5%)
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
+L+ C + ++ G ++H + + + + ++R+YA G E +F ++KRD
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 210 VA--SWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
+ +WN LIS Y+ +G L +M +G + T V+ A G++ GE
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMAE-DGVKPDRFTFPRVLKACGGIGSVQIGEA 216
Query: 268 VHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGS 326
+H ++K GF DV + +L+ YAKCG + + +F I K Y++ +M++G++ +G
Sbjct: 217 IHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGL 276
Query: 327 FMEAIALFQQMQAE----DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVE 382
EA+ +F+ M D V + + +L + K GR +HG++++ +E
Sbjct: 277 LHEALDIFRLMVQNGIEPDKVAISSVLARVL-------SFKHGRQLHGWVIRR----GME 325
Query: 383 GNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
L + +++ +Y + G + A +FD+M +D ++W ++I +H LKYF M
Sbjct: 326 WELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQM 382
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGM 502
+P+ +TF+S+LS C+++G+V +G +++ M +GI+P ++H+ CMV+L+GR GM
Sbjct: 383 HRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGM 442
Query: 503 VKEALSIILK-MVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSN 561
++EA S+I++ M + +WGALL A ++GN +GE AQRL ELEPDN LL
Sbjct: 443 MEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIR 502
Query: 562 VKASAGRWNEVEELRREMSEKDLK 585
+ + A R +VE +R+ M ++ L+
Sbjct: 503 IYSKAKRAEDVERVRQMMVDRGLE 526
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 153/300 (51%), Gaps = 11/300 (3%)
Query: 1 MEEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
M + ++ AWN I + +LGQ+ A++ + +M + GV D FTFP V +A + +
Sbjct: 153 MSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQ 212
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+ G+ H ++ G D+Y N ++ Y KC I AR VFD++ H+D VSW SM+ GY
Sbjct: 213 I-GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGY 271
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
+ + A D+F M + +EP+ V + +L + G Q+HG+ ++ G+ +
Sbjct: 272 LHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLS---FKHGRQLHGWVIRRGMEWEL 328
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
SV N+++ +Y+ +G + +F ++ +RD SWN +IS +S + ++ +M
Sbjct: 329 SVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLK---YFEQMHRA 385
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ--TSLLDFYAKCGKLD 297
I T V+S A G + GE + L+ K D ++ +++ Y + G ++
Sbjct: 386 NAKPDGI-TFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 108/226 (47%), Gaps = 20/226 (8%)
Query: 346 PEIWRNLLDACANLGALKLGRVVH----GYLMKNLFNGPVEGNLHMETSILNMYIRGGNI 401
PEI+ +LL+ C +L A+ G VH YL++N NL + + ++ +Y G
Sbjct: 92 PEIFASLLETCYSLRAIDHGVRVHHLIPPYLLRN--------NLGISSKLVRLYASCGYA 143
Query: 402 SSARAVFDRMPVKD--VIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
A VFDRM +D AW S+I G+ G +A+ + M E ++P+ TF +L
Sbjct: 144 EVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLK 203
Query: 460 ACSHSGLVSEGCKIYYSM-KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPD 518
AC G V G I+ + K GFG + + +V ++ +CG + +A + + M+ D
Sbjct: 204 ACGGIGSVQIGEAIHRDLVKEGFGYDVYV--LNALVVMYAKCGDIVKARN-VFDMIPHKD 260
Query: 519 SRIWGALLAASGVYG--NKTLGEYTAQRLLELEPDNAGYHTLLSNV 562
W ++L +G ++ L + +EPD ++L+ V
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARV 306
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 221 bits (562), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 255/511 (49%), Gaps = 43/511 (8%)
Query: 149 VMLQACCASTPLNVGTQIHGYAVKSGVLMDWS--VKNSVLRMYADKGSTEEVELLFSEI- 205
++L+ C + L G ++H SG+ + N++ + YA G + LF EI
Sbjct: 11 LLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP 70
Query: 206 -NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSK 264
+++D W L+S +S G ++ L EM+ ++ + L AK +L
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCL-FGVCAKLEDLGF 129
Query: 265 GEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQ 323
+ H + +K G V + +L+D Y KCG + ++F E+ KS ++ ++ ++
Sbjct: 130 AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVK 189
Query: 324 NGSFMEAIALFQQMQAEDLV---------------------IVPEIWR-----------N 351
+F +M + V + ++R +
Sbjct: 190 WEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCS 249
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEG---NLHMETSILNMYIRGGNISSARAVF 408
+L ACA G L +GR VH Y +K E ++ + T++++MY + GNI S+ VF
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
M ++V+ W ++ G HG G + F M+ ++P+ +TF ++LSACSHSG+V
Sbjct: 310 RLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVD 368
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAA 528
EG + ++S+++ +G+EP +DH+ CMVDL GR G+++EA ++ +M + P+ + G+LL +
Sbjct: 369 EGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGS 427
Query: 529 SGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKP 588
V+G + E + L+++ P N Y L+SN+ + GR + + LR + ++ ++K P
Sbjct: 428 CSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIP 487
Query: 589 GWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
G S I V + F SGD +HP +EIY L
Sbjct: 488 GLSSIYVNDSVHRFSSGDRSHPRTKEIYLKL 518
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 175/398 (43%), Gaps = 55/398 (13%)
Query: 63 GKMTHCVAIQMGLDL--DLYFCNTMIDFYVKCWCIGCARRVFD--LMLHRDVVSWTSMIA 118
GK H V GL Y N + FY + A+++FD + +D V WT++++
Sbjct: 25 GKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLS 84
Query: 119 GYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM 177
+ + + LF +MR + +E + V+++ + C L Q HG AVK GVL
Sbjct: 85 SFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLT 144
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILIS--------------FYSM- 222
V N+++ MY G EV+ +F E+ ++ V SW +++ F+ M
Sbjct: 145 SVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMP 204
Query: 223 ----------------VGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGE 266
G V L+ EM GH N TL ++SA A+ GNL G
Sbjct: 205 ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGR 264
Query: 267 GVHCLVIK--------TGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
VH +K + D ++ T+L+D YAKCG +D S+ +FR + ++ +T A+
Sbjct: 265 WVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF 324
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLG-RVVHGYLMKN 375
SG +G I +F QM E + P+ + +L AC++ G + G R H
Sbjct: 325 SGLAMHGKGRMVIDMFPQMIRE---VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG 381
Query: 376 LFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV 413
L E + ++++ R G I A + MPV
Sbjct: 382 L-----EPKVDHYACMVDLLGRAGLIEEAEILMREMPV 414
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 128/300 (42%), Gaps = 43/300 (14%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+ + W + + G +++ F +MR+ V D + + + + D + +
Sbjct: 74 KDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLE-DLGFAQQ 132
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFD---------------------- 103
H VA++MG+ + CN ++D Y KC + +R+F+
Sbjct: 133 GHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG 192
Query: 104 ---------LMLHRDVVSWTSMIAGYISERHVSVACDLFNKM--RVELEPNSVTLIVMLQ 152
M R+ V+WT M+AGY+ +L +M R N VTL ML
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 153 ACCASTPLNVGTQIHGYAVKSGVLM-------DWSVKNSVLRMYADKGSTEEVELLFSEI 205
AC S L VG +H YA+K ++M D V +++ MYA G+ + +F +
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
Query: 206 NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG 265
KR+V +WN L S +M G V + +M + + T T V+SA + G + +G
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQM--IREVKPDDLTFTAVLSACSHSGIVDEG 370
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 209/374 (55%), Gaps = 11/374 (2%)
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREI 306
T + + A A+ S + +HC + + G S D +L T+LLD Y+K G L + +LF E+
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
+ + A+++G + EA+ L+++M+ E + L AC++LG +K G
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEG- 229
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP-VKDVIAWTSMIEG 425
+N+F+G N+ + + ++MY + G + A VF++ K V+ W +MI G
Sbjct: 230 -------ENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 426 FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEP 485
F HG AL+ F+ + ++ ++P+ V++L+ L+AC H+GLV G ++ +M G+E
Sbjct: 283 FAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVER 341
Query: 486 ALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRL 545
+ H+ C+VDL R G ++EA II M ++PD +W +LL AS +Y + + E ++ +
Sbjct: 342 NMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREI 401
Query: 546 LELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSG 605
E+ +N G LLSNV A+ GRW +V +R +M K +KK PG S IE KG + F +
Sbjct: 402 KEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNS 461
Query: 606 DITHPEAEEIYAAL 619
D +H + EIY +
Sbjct: 462 DKSHEQWREIYEKI 475
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 13/198 (6%)
Query: 43 TFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVF 102
+FT RAL S D + HC + GL D C T++D Y K + A ++F
Sbjct: 113 SFTLKACARALCSSAMDQL-----HCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 103 DLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLN 161
D M RDV SW ++IAG +S S A +L+ +M E + + VT++ L AC +
Sbjct: 168 DEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK 227
Query: 162 VGTQI-HGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEIN-KRDVASWNILISF 219
G I HGY+ + + V N+ + MY+ G ++ +F + K+ V +WN +I+
Sbjct: 228 EGENIFHGYSNDNVI-----VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITG 282
Query: 220 YSMVGDMMRVAGLINEMQ 237
+++ G+ R + ++++
Sbjct: 283 FAVHGEAHRALEIFDKLE 300
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 121/266 (45%), Gaps = 51/266 (19%)
Query: 198 VELLFSEINKRDVASWNIL----ISFYSMVGDMMRVAGLINEMQSLEGHSWNI------- 246
++ L +IN+R +++ ++L + YS GD++ L +EM + SWN
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 247 -----ETLTL---------------VISAFAKC---GNLSKGEGVHCLVIKTGFSDD--V 281
E + L V++A C G++ +GE + G+S+D +
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF-----HGYSNDNVI 242
Query: 282 LQTSLLDFYAKCGKLDISVQLFREIH-FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAE 340
+ + +D Y+KCG +D + Q+F + KS +T M++GF +G A+ +F ++ E
Sbjct: 243 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKL--E 300
Query: 341 DLVIVPEIWRNL--LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRG 398
D I P+ L L AC + G ++ G V N+ VE N+ ++++ R
Sbjct: 301 DNGIKPDDVSYLAALTACRHAGLVEYGLSV----FNNMACKGVERNMKHYGCVVDLLSRA 356
Query: 399 GNISSARAVFDRMP-VKDVIAWTSMI 423
G + A + M + D + W S++
Sbjct: 357 GRLREAHDIICSMSMIPDPVLWQSLL 382
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 147/506 (29%), Positives = 249/506 (49%), Gaps = 56/506 (11%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCA 156
A ++FD + DV ++ G L+ +M + P+ T +L+AC
Sbjct: 65 AHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSK 124
Query: 157 STPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNIL 216
+ G HG V+ G +++ VKN+++ +A+ G LF + K +W+ +
Sbjct: 125 LEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSM 184
Query: 217 ISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG 276
S Y+ G + L +EM + +WN+ +I+ CL
Sbjct: 185 TSGYAKRGKIDEAMRLFDEMPYKDQVAWNV-----MITG--------------CL----- 220
Query: 277 FSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQ 336
KC ++D + +LF K +T AM+SG++ G EA+ +F++
Sbjct: 221 ---------------KCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKE 265
Query: 337 M----QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSIL 392
M + D+V + +LL ACA LG L+ G+ +H Y+++ V ++++ T I
Sbjct: 266 MRDAGEHPDVVTI----LSLLSACAVLGDLETGKRLHIYILET---ASVSSSIYVGTPIW 318
Query: 393 N----MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ 448
N MY + G+I A VF + +D+ W ++I G H +++ F M ++
Sbjct: 319 NALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVW 377
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALS 508
PN VTF+ ++ ACSHSG V EG K + M+ + IEP + H+ CMVD+ GR G ++EA
Sbjct: 378 PNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFM 437
Query: 509 IILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGR 568
+ M I P++ +W LL A +YGN LG+Y ++LL + D +G + LLSN+ AS G+
Sbjct: 438 FVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQ 497
Query: 569 WNEVEELRREMSEKDLKKKPGWSCIE 594
W+ V+++R+ + +KK G S IE
Sbjct: 498 WDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 196/447 (43%), Gaps = 69/447 (15%)
Query: 12 NLTIRTHVDLGQFHS-----ALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+++I HV G S +S + +M + GV D +TF V +A S + + G
Sbjct: 76 DVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRS-NGFAF 134
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H ++ G L+ Y N +I F+ C +G A +FD V+W+SM +GY +
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 127 SVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVL 186
A LF++M + + V VM+ C ++ +
Sbjct: 195 DEAMRLFDEMPYK---DQVAWNVMITGCLKCKEMDSARE--------------------- 230
Query: 187 RMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
LF ++DV +WN +IS Y G G+ EM+ H ++
Sbjct: 231 --------------LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHP-DV 275
Query: 247 ETLTLVISAFAKCGNLSKGEGVHCLVIKTG------FSDDVLQTSLLDFYAKCGKLDISV 300
T+ ++SA A G+L G+ +H +++T + + +L+D YAKCG +D ++
Sbjct: 276 VTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAI 335
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN------LLD 354
++FR + + T ++ G + + +I +F++MQ ++W N ++
Sbjct: 336 EVFRGVKDRDLSTWNTLIVGLALHHA-EGSIEMFEEMQR------LKVWPNEVTFIGVIL 388
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
AC++ G + GR LM++++N +E N+ +++M R G + A + M ++
Sbjct: 389 ACSHSGRVDEGRKYFS-LMRDMYN--IEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIE 445
Query: 415 -DVIAWTSMIEGFGSHGFGFEALKYFN 440
+ I W +++ +G E KY N
Sbjct: 446 PNAIVWRTLLGACKIYG-NVELGKYAN 471
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/369 (25%), Positives = 163/369 (44%), Gaps = 52/369 (14%)
Query: 165 QIHGYAVKSGVLMDWSVKNSVL--RMYADKGSTEEVELLFSEINKRDVASWNILISFYSM 222
QIH V +G++ + SV ++ + G+ + LF EI K DV+ N ++ +
Sbjct: 30 QIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQ 89
Query: 223 VGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDV 281
+ L EM+ G S + T T V+ A +K S G H V++ GF ++
Sbjct: 90 SMKPEKTVSLYTEMEK-RGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEY 148
Query: 282 LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAED 341
++ +L+ F+A CG L I+ +LF + + +M SG+ + G EA+ LF +M +D
Sbjct: 149 VKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKD 208
Query: 342 LVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNI 401
V W ++ C ++ +
Sbjct: 209 QV----AWNVMITGC---------------------------------------LKCKEM 225
Query: 402 SSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
SAR +FDR KDV+ W +MI G+ + G+ EAL F M + P+ VT LSLLSAC
Sbjct: 226 DSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSAC 285
Query: 462 SHSGLVSEGCKIYYSMKWGFGIEPALDHHT----CMVDLFGRCGMVKEALSIILKMVILP 517
+ G + G +++ + + ++ T ++D++ +CG + A+ + + V
Sbjct: 286 AVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIE-VFRGVKDR 344
Query: 518 DSRIWGALL 526
D W L+
Sbjct: 345 DLSTWNTLI 353
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 153/352 (43%), Gaps = 51/352 (14%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELE- 141
N MI +KC + AR +FD +DVV+W +MI+GY++ + A +F +MR E
Sbjct: 213 NVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEH 272
Query: 142 PNSVTLIVMLQACCASTPLNVGTQIHGY-----AVKSGVLMDWSVKNSVLRMYADKGSTE 196
P+ VT++ +L AC L G ++H Y +V S + + + N+++ MYA GS +
Sbjct: 273 PDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSID 332
Query: 197 EVELLFSEINKRDVASWNILI---SFYSMVGDMMRVAGLINEMQSLEGHSWNIE-TLTLV 252
+F + RD+++WN LI + + G + + EMQ L+ W E T V
Sbjct: 333 RAIEVFRGVKDRDLSTWNTLIVGLALHHAEGSI----EMFEEMQRLK--VWPNEVTFIGV 386
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYI 312
I A + G + +G L + D Y E + K Y
Sbjct: 387 ILACSHSGRVDEGRKYFSL--------------MRDMYNI------------EPNIKHY- 419
Query: 313 TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYL 372
G M+ + G EA + M+ E IV WR LL AC G ++LG+ + L
Sbjct: 420 --GCMVDMLGRAGQLEEAFMFVESMKIEPNAIV---WRTLLGACKIYGNVELGKYANEKL 474
Query: 373 MKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE 424
+ G+ + ++I + + R +FD VK S+IE
Sbjct: 475 LS--MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTG-VSLIE 523
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+ + WN I +V+ G AL FK+MR G D T + A + + D GK
Sbjct: 238 KDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVL-GDLETGKR 296
Query: 66 TH-----CVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
H ++ + + N +ID Y KC I A VF + RD+ +W ++I G
Sbjct: 297 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVG- 355
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQ 165
++ H + ++F +M R+++ PN VT I ++ AC S ++ G +
Sbjct: 356 LALHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRK 401
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 140/340 (41%), Gaps = 29/340 (8%)
Query: 259 CGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKC---GKLDISVQLFREIHFKSYITLG 315
C N+ + +H ++ G ++ L + A G L + +LF EI
Sbjct: 22 CKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICN 81
Query: 316 AMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKN 375
++ G Q+ + ++L+ +M+ + + +L AC+ L G HG ++++
Sbjct: 82 HVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRH 141
Query: 376 LFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEA 435
F N +++ +++ + G++ A +FD +AW+SM G+ G EA
Sbjct: 142 GF----VLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 436 LKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG--IEPALDHHTCM 493
++ F+ M + V + +++ C CK S + F E + M
Sbjct: 198 MRLFDEM----PYKDQVAWNVMITGCLK-------CKEMDSARELFDRFTEKDVVTWNAM 246
Query: 494 VDLFGRCGMVKEALSIILKMVIL---PDSRIWGALLAASGVYGNKTLGEYTAQRLLELEP 550
+ + CG KEAL I +M PD +LL+A V G+ G+ +LE
Sbjct: 247 ISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETAS 306
Query: 551 DNAGYH------TLLSNVKASAGRWNEVEELRREMSEKDL 584
++ + L ++ A G + E+ R + ++DL
Sbjct: 307 VSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 165/623 (26%), Positives = 296/623 (47%), Gaps = 45/623 (7%)
Query: 14 TIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRA--DAVYGKMTHCVAI 71
+ R + GQ + A TF +R H+ F LS+ + V G+ H I
Sbjct: 52 SFRHCISHGQLYEAFRTFSLLRYQSGSHE-FVLYSSASLLSTCVGFNEFVPGQQLHAHCI 110
Query: 72 QMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACD 131
GL+ D ++ FY + A+ + + + W +I YI + +
Sbjct: 111 SSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVS 170
Query: 132 LFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYA 190
++ +M + + + T +++AC A G +HG S + V N+++ MY
Sbjct: 171 VYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYK 230
Query: 191 DKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM--QSLEGH--SWN- 245
G + LF +++RD SWN +I+ Y+ + L++ M +E +WN
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 246 -----------IETLTLVI------------------SAFAKCGNLSKGEGVHCLVIKT- 275
I L V+ A + G L G+ HCLVI++
Sbjct: 291 IAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSC 350
Query: 276 GFSDDV--LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIAL 333
FS D+ ++ SL+ Y++C L + +F+++ S T +++SGF N E L
Sbjct: 351 SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 334 FQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN 393
++M ++L A +G L+ G+ H Y+++ + L + S+++
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR---QSYKDCLILWNSLVD 467
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
MY + G I +A+ VFD M +D + +TS+I+G+G G G AL +F M ++P+ VT
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+++LSACSHS LV EG ++ M+ FGI L+H++CMVDL+ R G + +A I +
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Query: 514 VILPDSRIWGALLAASGVYGNKTLGEYTAQR-LLELEPDNAGYHTLLSNVKASAGRWNEV 572
P S + LL A ++GN +GE+ A + LLE +P++ G++ LL+++ A G W+++
Sbjct: 588 PYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKL 647
Query: 573 EELRREMSEKDLKKKPGWSCIEV 595
++ +S+ ++K ++ +E
Sbjct: 648 VTVKTLLSDLGVQKAHEFALMET 670
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 206/447 (46%), Gaps = 47/447 (10%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ + WN+ I +++ +F ++S +K+M G+ D FT+P V +A +++ D YG++
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL-LDFAYGRVV 206
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H +LY CN +I Y + + ARR+FD M RD VSW ++I Y SE +
Sbjct: 207 HGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 127 SVACDLFNKMRV------------------------------------ELEPNSVTLIVM 150
A L ++M + + SV +I
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVL---MDWSVKNSVLRMYADKGSTEEVELLFSEINK 207
L+AC L G H ++S +D +V+NS++ MY+ ++F ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 208 RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
+++WN +IS ++ + L+ EM L G N TL ++ FA+ GNL G+
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 268 VHCLVIKTGFSDD--VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNG 325
HC +++ D +L SL+D YAK G++ + ++F + + +T +++ G+ + G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 326 SFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNL 385
A+A F+ M + +L AC++ ++ G + M+++F + L
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK-MEHVFG--IRLRL 561
Query: 386 HMETSILNMYIRGGNISSARAVFDRMP 412
+ ++++Y R G + AR +F +P
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 219 bits (558), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 165/623 (26%), Positives = 296/623 (47%), Gaps = 45/623 (7%)
Query: 14 TIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRA--DAVYGKMTHCVAI 71
+ R + GQ + A TF +R H+ F LS+ + V G+ H I
Sbjct: 52 SFRHCISHGQLYEAFRTFSLLRYQSGSHE-FVLYSSASLLSTCVGFNEFVPGQQLHAHCI 110
Query: 72 QMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACD 131
GL+ D ++ FY + A+ + + + W +I YI + +
Sbjct: 111 SSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVS 170
Query: 132 LFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYA 190
++ +M + + + T +++AC A G +HG S + V N+++ MY
Sbjct: 171 VYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYK 230
Query: 191 DKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM--QSLEGH--SWN- 245
G + LF +++RD SWN +I+ Y+ + L++ M +E +WN
Sbjct: 231 RFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNT 290
Query: 246 -----------IETLTLVI------------------SAFAKCGNLSKGEGVHCLVIKT- 275
I L V+ A + G L G+ HCLVI++
Sbjct: 291 IAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSC 350
Query: 276 GFSDDV--LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIAL 333
FS D+ ++ SL+ Y++C L + +F+++ S T +++SGF N E L
Sbjct: 351 SFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFL 410
Query: 334 FQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN 393
++M ++L A +G L+ G+ H Y+++ + L + S+++
Sbjct: 411 LKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRR---QSYKDCLILWNSLVD 467
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
MY + G I +A+ VFD M +D + +TS+I+G+G G G AL +F M ++P+ VT
Sbjct: 468 MYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVT 527
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+++LSACSHS LV EG ++ M+ FGI L+H++CMVDL+ R G + +A I +
Sbjct: 528 MVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Query: 514 VILPDSRIWGALLAASGVYGNKTLGEYTAQR-LLELEPDNAGYHTLLSNVKASAGRWNEV 572
P S + LL A ++GN +GE+ A + LLE +P++ G++ LL+++ A G W+++
Sbjct: 588 PYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKL 647
Query: 573 EELRREMSEKDLKKKPGWSCIEV 595
++ +S+ ++K ++ +E
Sbjct: 648 VTVKTLLSDLGVQKAHEFALMET 670
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/447 (24%), Positives = 206/447 (46%), Gaps = 47/447 (10%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ + WN+ I +++ +F ++S +K+M G+ D FT+P V +A +++ D YG++
Sbjct: 148 HPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAAL-LDFAYGRVV 206
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H +LY CN +I Y + + ARR+FD M RD VSW ++I Y SE +
Sbjct: 207 HGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKL 266
Query: 127 SVACDLFNKMRV------------------------------------ELEPNSVTLIVM 150
A L ++M + + SV +I
Sbjct: 267 GEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVL---MDWSVKNSVLRMYADKGSTEEVELLFSEINK 207
L+AC L G H ++S +D +V+NS++ MY+ ++F ++
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDID-NVRNSLITMYSRCSDLRHAFIVFQQVEA 385
Query: 208 RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
+++WN +IS ++ + L+ EM L G N TL ++ FA+ GNL G+
Sbjct: 386 NSLSTWNSIISGFAYNERSEETSFLLKEML-LSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 268 VHCLVIKTGFSDD--VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNG 325
HC +++ D +L SL+D YAK G++ + ++F + + +T +++ G+ + G
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLG 504
Query: 326 SFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNL 385
A+A F+ M + +L AC++ ++ G + M+++F + L
Sbjct: 505 KGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTK-MEHVFG--IRLRL 561
Query: 386 HMETSILNMYIRGGNISSARAVFDRMP 412
+ ++++Y R G + AR +F +P
Sbjct: 562 EHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 218 bits (556), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 138/511 (27%), Positives = 258/511 (50%), Gaps = 16/511 (3%)
Query: 103 DLMLHRDVVSWTSMIAGYISERHVSVACDLFN--KMRVELEPNSVTLIVMLQACCASTPL 160
D + + V+ S I + A +LF ++R + T +++AC +
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 161 NVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFY 220
+++G+ + +G + + N +L M+ G + LF EI +R++ S+ +IS +
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 221 SMVGDMMRVAGLIN----EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG 276
G+ + L E+ E H T +++ A A G++ G+ +H +K G
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETH-----TFAVMLRASAGLGSIYVGKQLHVCALKLG 254
Query: 277 FSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQ 335
D+ + L+D Y+KCG ++ + F + K+ + +++G+ +G EA+ L
Sbjct: 255 VVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLY 314
Query: 336 QMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMY 395
M+ + I ++ L L+L + H L++N F + N T++++ Y
Sbjct: 315 DMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVAN----TALVDFY 370
Query: 396 IRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFL 455
+ G + +AR VFD++P K++I+W +++ G+ +HG G +A+K F M+ + PN VTFL
Sbjct: 371 SKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFL 430
Query: 456 SLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVI 515
++LSAC++SGL +G +I+ SM GI+P H+ CM++L GR G++ EA++ I + +
Sbjct: 431 AVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPL 490
Query: 516 LPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEEL 575
+W ALL A + N LG A++L + P+ G + ++ N+ S G+ E +
Sbjct: 491 KTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGV 550
Query: 576 RREMSEKDLKKKPGWSCIEVKGVSYGFLSGD 606
+ K L P + +EV ++ FLSGD
Sbjct: 551 LETLESKGLSMMPACTWVEVGDQTHSFLSGD 581
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 193/375 (51%), Gaps = 13/375 (3%)
Query: 53 LSSMR-ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVV 111
L S+R VYG M + G + + Y N ++ +VKC I ARR+FD + R++
Sbjct: 136 LKSIRCVKRVYGFM-----MSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLY 190
Query: 112 SWTSMIAGYISERHVSVACDLFNKMRVEL-EPNSVTLIVMLQACCASTPLNVGTQIHGYA 170
S+ S+I+G+++ + A +LF M EL + + T VML+A + VG Q+H A
Sbjct: 191 SYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCA 250
Query: 171 VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVA 230
+K GV+ + V ++ MY+ G E+ F + ++ +WN +I+ Y++ G
Sbjct: 251 LKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEAL 310
Query: 231 GLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDF 289
L+ +M+ G S + TL+++I K L + H +I+ GF S+ V T+L+DF
Sbjct: 311 CLLYDMRD-SGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDF 369
Query: 290 YAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW 349
Y+K G++D + +F ++ K+ I+ A+M G+ +G +A+ LF++M A ++ +
Sbjct: 370 YSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTF 429
Query: 350 RNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFD 409
+L ACA G + G + +L + +G +H ++ + R G + A A
Sbjct: 430 LAVLSACAYSGLSEQGWEI--FLSMSEVHGIKPRAMHY-ACMIELLGRDGLLDEAIAFIR 486
Query: 410 RMPVKDVI-AWTSMI 423
R P+K + W +++
Sbjct: 487 RAPLKTTVNMWAALL 501
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 174/411 (42%), Gaps = 44/411 (10%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N ++ I V+ G + A FK M + +T TF V+ RA + + + V GK
Sbjct: 188 NLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYV-GKQL 246
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H A+++G+ + + +ID Y KC I AR F+ M + V+W ++IAGY +
Sbjct: 247 HVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYS 306
Query: 127 SVA-CDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
A C L++ + + TL +M++ L + Q H +++G + ++
Sbjct: 307 EEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTAL 366
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ Y+ G + +F ++ ++++ SWN L+ Y+ G L +M + + N
Sbjct: 367 VDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA-ANVAPN 425
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFRE 305
T V+SA A G +G + L S ++ R
Sbjct: 426 HVTFLAVLSACAYSGLSEQGWEI------------FLSMS-----------EVHGIKPRA 462
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
+H+ I L ++G EAIA ++ + V +W LL+AC L+LG
Sbjct: 463 MHYACMIEL------LGRDGLLDEAIAFIRRAPLKTTV---NMWAALLNACRMQENLELG 513
Query: 366 RVVHGYLMKNLFN-GPVE-GNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
RVV + L+ GP + GN + NMY G + A V + + K
Sbjct: 514 RVV----AEKLYGMGPEKLGNY---VVMYNMYNSMGKTAEAAGVLETLESK 557
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 150/516 (29%), Positives = 251/516 (48%), Gaps = 89/516 (17%)
Query: 113 WTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAV 171
W +I G+ + R+ + ++ +M R L P+ +T ++++ + +G +H V
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 172 KSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAG 231
KSG ++W D+ N LI Y D
Sbjct: 136 KSG--LEW-----------------------------DLFICNTLIHMYGSFRDQASARK 164
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYA 291
L +EM +WN S+LD YA
Sbjct: 165 LFDEMPHKNLVTWN---------------------------------------SILDAYA 185
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQM------QAEDLVIV 345
K G + + +F E+ + +T +M+ G+++ G + +A+ +F QM +A ++ +V
Sbjct: 186 KSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMV 245
Query: 346 PEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSAR 405
+++ ACA+LGAL G+ VH Y++ + P+ + ++TS+++MY + G+I A
Sbjct: 246 -----SVICACAHLGALNRGKTVHRYILD--VHLPL--TVILQTSLIDMYAKCGSIGDAW 296
Query: 406 AVFDRMPVK--DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSH 463
+VF R VK D + W ++I G SHGF E+L+ F+ M E ++ P+ +TFL LL+ACSH
Sbjct: 297 SVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSH 356
Query: 464 SGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWG 523
GLV E + S+K G EP +H+ CMVD+ R G+VK+A I +M I P + G
Sbjct: 357 GGLVKEAWHFFKSLKES-GAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLG 415
Query: 524 ALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKD 583
ALL +GN L E ++L+EL+P N G + L+NV A ++ +R M +K
Sbjct: 416 ALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKG 475
Query: 584 LKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
+KK G S +++ G + F++ D TH +++IYA L
Sbjct: 476 VKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVL 511
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 162/340 (47%), Gaps = 41/340 (12%)
Query: 258 KCGNLSKGEGVHCLVIKTGFSDD---VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITL 314
+C ++S+ +H L+I G S++ V QT + G +D + + ++
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGW 76
Query: 315 GAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
++ GF + + ++I+++ QM L+ + L+ + + L KLG +H ++K
Sbjct: 77 NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVK 136
Query: 375 N---------------------------LFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
+ LF+ NL SIL+ Y + G++ SAR V
Sbjct: 137 SGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLV 196
Query: 408 FDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRM---QPNSVTFLSLLSACSHS 464
FD M +DV+ W+SMI+G+ G +AL+ F+ MM RM + N VT +S++ AC+H
Sbjct: 197 FDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMM--RMGSSKANEVTMVSVICACAHL 254
Query: 465 GLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILP-DSRIW 522
G ++ G ++ Y + + L T ++D++ +CG + +A S+ + + D+ +W
Sbjct: 255 GALNRGKTVHRYILDVHLPLTVIL--QTSLIDMYAKCGSIGDAWSVFYRASVKETDALMW 312
Query: 523 GALLAASGVYG--NKTLGEYTAQRLLELEPDNAGYHTLLS 560
A++ +G ++L + R +++PD + LL+
Sbjct: 313 NAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLA 352
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 124/272 (45%), Gaps = 38/272 (13%)
Query: 1 MEEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+ + PN WN IR + ++S + +M + G+ D T+P + ++ SS ++
Sbjct: 68 LSDPPN--YGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKS-SSRLSNR 124
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMI-------------------------------DFY 89
G HC ++ GL+ DL+ CNT+I D Y
Sbjct: 125 KLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY 184
Query: 90 VKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRV--ELEPNSVTL 147
K + AR VFD M RDVV+W+SMI GY+ + A ++F++M + N VT+
Sbjct: 185 AKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTM 244
Query: 148 IVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF--SEI 205
+ ++ AC LN G +H Y + + + ++ S++ MYA GS + +F + +
Sbjct: 245 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV 304
Query: 206 NKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
+ D WN +I + G + L ++M+
Sbjct: 305 KETDALMWNAIIGGLASHGFIRESLQLFHKMR 336
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 218 bits (554), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/470 (29%), Positives = 236/470 (50%), Gaps = 36/470 (7%)
Query: 186 LRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ MY+ G ++ + K++ S NILI+ Y GD++ + +EM + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 246 I------------------------------ETLTLVISAFAKCGNLSKGEGVHCLVIKT 275
TL V S A ++S G+ +H IK
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 276 GFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALF 334
G D V+ +SL Y + GKL + R + ++ + ++ G QNG + L+
Sbjct: 121 GLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY 180
Query: 335 QQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNM 394
+ M+ + +L +C++L G+ +H +K + + +S+++M
Sbjct: 181 KMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKI----GASSVVAVVSSLISM 236
Query: 395 YIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH-RMQPNSVT 453
Y + G + A F +D + W+SMI +G HG G EA++ FN M E M+ N V
Sbjct: 237 YSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVA 296
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
FL+LL ACSHSGL +G +++ M +G +P L H+TC+VDL GR G + +A +II M
Sbjct: 297 FLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSM 356
Query: 514 VILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVE 573
I D IW LL+A ++ N + + + +L+++P+++ + LL+NV ASA RW +V
Sbjct: 357 PIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVS 416
Query: 574 ELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLS 623
E+R+ M +K++KK+ G S E KG + F GD + +++EIY+ L L+
Sbjct: 417 EVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELT 466
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 189/406 (46%), Gaps = 19/406 (4%)
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
A AVYG+M + N +I+ YV+ + AR+VFD M R + +W +MI
Sbjct: 13 AVAVYGRMRK---------KNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 118 AGYISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
AG I LF +M + P+ TL + +++G QIHGY +K G+
Sbjct: 64 AGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLE 123
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
+D V +S+ MY G ++ E++ + R++ +WN LI + G V L +M
Sbjct: 124 LDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLY-KM 182
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGK 295
+ G N T V+S+ + +G+ +H IK G S + +SL+ Y+KCG
Sbjct: 183 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 242
Query: 296 LDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI-WRNLLD 354
L + + F E + + +M+S + +G EAI LF M + + + E+ + NLL
Sbjct: 243 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 302
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
AC++ G G + +++ P L T ++++ R G + A A+ MP+K
Sbjct: 303 ACSHSGLKDKGLELFDMMVEKYGFKP---GLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 359
Query: 415 -DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
D++ W +++ H A + F +++ + PN LL+
Sbjct: 360 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQ--IDPNDSACYVLLA 403
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 135/317 (42%), Gaps = 5/317 (1%)
Query: 2 EEEPNNTMA-WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P+ + WN I + LS F++M +G D +T V + +R+ +
Sbjct: 49 DEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVS 108
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+ G+ H I+ GL+LDL +++ Y++ + V M R++V+W ++I G
Sbjct: 109 I-GQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGN 167
Query: 121 ISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
L+ M++ PN +T + +L +C G QIH A+K G
Sbjct: 168 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV 227
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
+V +S++ MY+ G + FSE D W+ +IS Y G L N M
Sbjct: 228 AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 287
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKG-EGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLD 297
N ++ A + G KG E +V K GF + T ++D + G LD
Sbjct: 288 TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLD 347
Query: 298 ISVQLFREIHFKSYITL 314
+ + R + K+ I +
Sbjct: 348 QAEAIIRSMPIKTDIVI 364
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 248/478 (51%), Gaps = 43/478 (8%)
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
L+ NS TLI QA QIH V +G D S+ ++ Y K STE
Sbjct: 14 LQQNSKTLI---QA----------KQIHAQLVINGC-HDNSLFGKLIGHYCSKPSTESSS 59
Query: 200 -----LLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVIS 254
L+F D +N L+ S D +R+ SL N T V+
Sbjct: 60 KLAHLLVFPRFGHPDKFLFNTLLK-CSKPEDSIRIFANYASKSSL--LYLNERTFVFVLG 116
Query: 255 AFAKCGN---LSKGEGVHCLVIKTGF--SDDVLQTSLLDFYAKCGKLDISVQLFREIHFK 309
A A+ + L G VH +V K GF +++ T+LL FYAK G L + ++F E+ +
Sbjct: 117 ACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPER 176
Query: 310 SYITLGAMMSGFIQ-----NGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGAL 362
+ +T AM+ G+ N + +A+ LF++ + P +L A + G L
Sbjct: 177 TSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLL 236
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
++G +VHGY+ K F V+ + + T++++MY + G +++A +VF+ M VK+V WTSM
Sbjct: 237 EIGSLVHGYIEKLGFTPEVD--VFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSM 294
Query: 423 IEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
G +G G E N M E ++PN +TF SLLSA H GLV EG +++ SMK FG
Sbjct: 295 ATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFG 354
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTA 542
+ P ++H+ C+VDL G+ G ++EA IL M I PD+ + +L A +YG +GE
Sbjct: 355 VTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIG 414
Query: 543 QRLLELEPDNAGY-------HTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
+ LLE+E ++ + LSNV A G+W EVE+LR+EM E+ +K +PG+S +
Sbjct: 415 KALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 113/253 (44%), Gaps = 14/253 (5%)
Query: 63 GKMTHCVAIQMGLDLDLYFC-NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYI 121
G++ H + ++G + T++ FY K + AR+VFD M R V+W +MI GY
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 122 SER-----HVSVACDLFNKMRV---ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKS 173
S + + A LF + + P T++ +L A + L +G+ +HGY K
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 174 GVL--MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAG 231
G +D + +++ MY+ G +F + ++V +W + + ++ G
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG-EGVHCLVIKTGFSDDVLQTS-LLDF 289
L+N M G N T T ++SA+ G + +G E + + G + + ++D
Sbjct: 310 LLNRMAE-SGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDL 368
Query: 290 YAKCGKLDISVQL 302
K G++ + Q
Sbjct: 369 LGKAGRIQEAYQF 381
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 EEEPNNT-MAWNLTIR---THVDLGQFHS--ALSTFKKMRQMGV---PHDTFTFPVVNRA 52
+E P T + WN I +H D G ++ A+ F++ G P DT T V A
Sbjct: 171 DEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDT-TMVCVLSA 229
Query: 53 LSSMRADAVYGKMTHCVAIQMGL--DLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDV 110
+S + G + H ++G ++D++ ++D Y KC C+ A VF+LM ++V
Sbjct: 230 ISQTGLLEI-GSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNV 288
Query: 111 VSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQA 153
+WTSM G + +L N+M ++PN +T +L A
Sbjct: 289 FTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSA 332
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 168/637 (26%), Positives = 315/637 (49%), Gaps = 52/637 (8%)
Query: 27 ALSTFKKMRQMG-VPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTM 85
AL F +MR+ G V + +TF + A + ++ G H + ++ G ++ N++
Sbjct: 164 ALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL-GIQIHGLIVKSGFLNSVFVSNSL 222
Query: 86 IDFYVKCWCIGC--ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVE-LE 141
+ Y K C ++FD + RDV SW ++++ + E A DLF +M RVE
Sbjct: 223 MSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFG 282
Query: 142 PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELL 201
+S TL +L +C S+ L G ++HG A++ G++ + SV N+++ Y+ ++VE L
Sbjct: 283 VDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESL 342
Query: 202 FSEINKRDVASWNILISFY---SMVGDMMRVAGLINEMQSL-----------EGHSWNIE 247
+ + +D ++ +I+ Y MV + + + E ++ GH ++
Sbjct: 343 YEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGH--GLK 400
Query: 248 TLTL---------------VISAFAKCGNLSK---GEGVHCLVIKTGFS-DDVLQTSLLD 288
L L + SA CG +S+ E +H IK G + + +QT+LLD
Sbjct: 401 ALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLD 460
Query: 289 FYAKCGKLDISVQLFRE--IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVP 346
+C ++ + ++F + + S +++ G+ +NG +A++LF + E + +
Sbjct: 461 MCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLD 520
Query: 347 EIWRNL-LDACANLGALKLGRVVHGYLMK-NLFNGPVEGNLHMETSILNMYIRGGNISSA 404
E+ L L C LG ++G +H Y +K F+ GN S+++MY + + A
Sbjct: 521 EVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN-----SLISMYAKCCDSDDA 575
Query: 405 RAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC--S 462
+F+ M DVI+W S+I + G EAL ++ M E ++P+ +T ++SA +
Sbjct: 576 IKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYT 635
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIW 522
S +S ++ SMK + IEP +H+T V + G G+++EA I M + P+ +
Sbjct: 636 ESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVL 695
Query: 523 GALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEK 582
ALL + ++ N ++ + A+ +L +P+ + L SN+ +++G W+ E +R EM E+
Sbjct: 696 RALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRER 755
Query: 583 DLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAAL 619
+K P S I + + F + D +HP+ ++IY L
Sbjct: 756 GYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGL 792
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 136/513 (26%), Positives = 247/513 (48%), Gaps = 53/513 (10%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE--L 140
N +I Y+K A VF + VVS+T++I+G+ A +F +MR +
Sbjct: 118 NALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY-ADKGST-EEV 198
+PN T + +L AC + ++G QIHG VKSG L V NS++ +Y D GS+ ++V
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 199 ELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAK 258
LF EI +RDVASWN ++S G + L EM +EG + TL+ ++S+
Sbjct: 238 LKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTD 297
Query: 259 CGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAK------------------------- 292
L +G +H I+ G ++ + +L+ FY+K
Sbjct: 298 SSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEM 357
Query: 293 ------CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVP 346
G +D +V++F + K+ IT A+M+GF +NG ++A+ LF M + +
Sbjct: 358 ITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTD 417
Query: 347 EIWRNLLDACANLGALKLGRVVHGYLMK--NLFNGPVEGNLHMETSILNMYIRGGNISSA 404
+ +DAC + K+ +HG+ +K FN + +T++L+M R ++ A
Sbjct: 418 FSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCI------QTALLDMCTRCERMADA 471
Query: 405 RAVFDRMP--VKDVIAWTSMIEGFGSHGFGFEALKYFNLMM-EHRMQPNSVTFLSLLSAC 461
+FD+ P + A TS+I G+ +G +A+ F+ + E ++ + V+ +L+ C
Sbjct: 472 EEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Query: 462 SHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSR 520
G G +I+ Y++K G+ + +L + ++ ++ +C +A+ I M D
Sbjct: 532 GTLGFREMGYQIHCYALKAGYFSDISLGN--SLISMYAKCCDSDDAIKIFNTMR-EHDVI 588
Query: 521 IWGALLAASGVY--GNKTLGEYTAQRLLELEPD 551
W +L++ + G++ L ++ E++PD
Sbjct: 589 SWNSLISCYILQRNGDEALALWSRMNEKEIKPD 621
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 199/459 (43%), Gaps = 49/459 (10%)
Query: 2 EEEPNNTMA-WNLTIRTHVDLGQFHSALSTFKKM-RQMGVPHDTFTFPVVNRALSSMRAD 59
+E P +A WN + + V G+ H A F +M R G D+FT + LSS
Sbjct: 242 DEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL---LSSCTDS 298
Query: 60 AVY--GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
+V G+ H AI++GL +L N +I FY K W + ++++M+ +D V++T MI
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMI 358
Query: 118 AGYISERHVSVACDLF--------------------------------NKMRVELEPNSV 145
Y+S V A ++F + ++ +E
Sbjct: 359 TAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDF 418
Query: 146 TLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSE- 204
+L + AC + V QIHG+ +K G + ++ ++L M + E +F +
Sbjct: 419 SLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQW 478
Query: 205 -INKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLS 263
N + +I Y+ G + L + + + +LTL+++ G
Sbjct: 479 PSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFRE 538
Query: 264 KGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFI 322
G +HC +K G FSD L SL+ YAKC D ++++F + I+ +++S +I
Sbjct: 539 MGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYI 598
Query: 323 QNGSFMEAIALFQQMQAEDLVIVPEI--WRNLLDACANLGALKLGRVVHGYL-MKNLFNG 379
+ EA+AL+ +M ++ I P+I ++ A + KL +L MK +++
Sbjct: 599 LQRNGDEALALWSRMNEKE--IKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYD- 655
Query: 380 PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA 418
+E T+ + + G + A + MPV+ ++
Sbjct: 656 -IEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVS 693
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 109/224 (48%), Gaps = 12/224 (5%)
Query: 257 AKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGA 316
A+ ++ + VH +K L +L+ Y K G ++ +F + + ++ A
Sbjct: 91 AQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTA 150
Query: 317 MMSGFIQNGSFMEAIALFQQMQAEDLVIVPE-IWRNLLDACANLGALKLGRVVHGYLMKN 375
++SGF + +EA+ +F +M+ LV E + +L AC + LG +HG ++K+
Sbjct: 151 LISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS 210
Query: 376 LFNGPVEGNLHMETSILNMYIR--GGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGF 433
F V + S++++Y + G + +FD +P +DV +W +++ G
Sbjct: 211 GFLNSV----FVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSH 266
Query: 434 EALKYFNLMMEHRMQ---PNSVTFLSLLSACSHSGLVSEGCKIY 474
+A F M +R++ +S T +LLS+C+ S ++ G +++
Sbjct: 267 KAFDLFYEM--NRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELH 308
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 6/142 (4%)
Query: 334 FQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN 393
F + + ED+ V + + LL A +++ + VH +K E + ++++
Sbjct: 68 FDKEETEDIESVIDGFFYLLRLSAQYHDVEVTKAVHASFLK-----LREEKTRLGNALIS 122
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALK-YFNLMMEHRMQPNSV 452
Y++ G A VF + V+++T++I GF EALK +F + +QPN
Sbjct: 123 TYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEY 182
Query: 453 TFLSLLSACSHSGLVSEGCKIY 474
TF+++L+AC S G +I+
Sbjct: 183 TFVAILTACVRVSRFSLGIQIH 204
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 153/522 (29%), Positives = 253/522 (48%), Gaps = 11/522 (2%)
Query: 116 MIAGYISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGV 175
M G+I H++ A LF + T ++ ST +H +K G
Sbjct: 1 MKKGFIQNVHLAPATSLFVPQYKNDFFHLKTKAFLVHKLSESTNAAFTNLLHTLTLKLGF 60
Query: 176 LMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINE 235
D N ++ Y LF E+ + +V SW +IS Y+ +G + +
Sbjct: 61 ASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQK 120
Query: 236 MQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCG 294
M N T V A + G+ +H + +G + V+ +SL+D Y KC
Sbjct: 121 MHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCN 180
Query: 295 KLDISVQLFREI--HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWR 350
++ + ++F + + ++ ++ +M++ + QN EAI LF+ A +
Sbjct: 181 DVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLA 240
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
+++ AC++LG L+ G+V HG + + G E N + TS+L+MY + G++S A +F R
Sbjct: 241 SVISACSSLGRLQWGKVAHGLVTR----GGYESNTVVATSLLDMYAKCGSLSCAEKIFLR 296
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
+ VI++TSMI HG G A+K F+ M+ R+ PN VT L +L ACSHSGLV+EG
Sbjct: 297 IRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEG 356
Query: 471 CKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEA--LSIILKMVILPDSRIWGALLAA 528
+ M +G+ P H+TC+VD+ GR G V EA L+ +++ + +WGALL+A
Sbjct: 357 LEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSA 416
Query: 529 SGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKP 588
++G + ++RL++ + LSN A +G W + E LR EM K+
Sbjct: 417 GRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKER 476
Query: 589 GWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
S IE K Y F +GD++ E+ EI L L + ++ G
Sbjct: 477 ACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKERG 518
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 178/385 (46%), Gaps = 12/385 (3%)
Query: 55 SMRADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWT 114
S +A + + H + +++G D + N ++ YVK I AR++FD M +VVSWT
Sbjct: 40 SESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWT 99
Query: 115 SMIAGYISERHVSVACDLFNKMRVE--LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVK 172
S+I+GY A +F KM + + PN T + +AC A +G IH
Sbjct: 100 SVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEI 159
Query: 173 SGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI--NKRDVASWNILISFYSMVGDMMRVA 230
SG+ + V +S++ MY E +F + R+V SW +I+ Y+
Sbjct: 160 SGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAI 219
Query: 231 GLINEMQ-SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLD 288
L +L N L VISA + G L G+ H LV + G+ S+ V+ TSLLD
Sbjct: 220 ELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLD 279
Query: 289 FYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI 348
YAKCG L + ++F I S I+ +M+ ++G A+ LF +M A +
Sbjct: 280 MYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVT 339
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
+L AC++ G + G + + LM + G V + H T +++M R G + A +
Sbjct: 340 LLGVLHACSHSGLVNEG-LEYLSLMAEKY-GVVPDSRHY-TCVVDMLGRFGRVDEAYELA 396
Query: 409 DRMPV---KDVIAWTSMIEGFGSHG 430
+ V + + W +++ HG
Sbjct: 397 KTIEVGAEQGALLWGALLSAGRLHG 421
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 148/311 (47%), Gaps = 11/311 (3%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQ-MGVPHDTFTFPVVNRALSSMRADAVY 62
EPN ++W I + D+G+ +ALS F+KM + VP + +TF V +A S++ A++
Sbjct: 92 EPN-VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSAL-AESRI 149
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLML--HRDVVSWTSMIAGY 120
GK H GL ++ ++++D Y KC + ARRVFD M+ R+VVSWTSMI Y
Sbjct: 150 GKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAY 209
Query: 121 ISERHVSVACDLFNKMRVEL---EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM 177
A +LF L N L ++ AC + L G HG + G
Sbjct: 210 AQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYES 269
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
+ V S+L MYA GS E +F I V S+ +I + G L +EM
Sbjct: 270 NTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV 329
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKG-EGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGK 295
+ + N TL V+ A + G +++G E + + K G D T ++D + G+
Sbjct: 330 AGRINP-NYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGR 388
Query: 296 LDISVQLFREI 306
+D + +L + I
Sbjct: 389 VDEAYELAKTI 399
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 215 bits (547), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 154/606 (25%), Positives = 292/606 (48%), Gaps = 22/606 (3%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E + + +NL I + G A+ + +M G+ TFP V S+ +D +
Sbjct: 71 EMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSV----LSVCSDEL 126
Query: 62 Y---GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIA 118
+ G HC I +G +++ + ++ Y + A ++FD ML R++ ++
Sbjct: 127 FCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLR 186
Query: 119 GYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG-VL 176
+ +++ +M +E + N +T M++ C + G Q+H VKSG +
Sbjct: 187 CFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNI 246
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
+ V N ++ Y+ G F+ + ++DV SWN ++S + G ++ L ++M
Sbjct: 247 SNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKM 306
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVL--QTSLLDFYAKCG 294
Q G +I ++ ++ ++ G+ +HC V+K GF L Q++L+D Y KC
Sbjct: 307 Q-FWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCN 365
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAE----DLVIVPEIWR 350
++ S L++ + + ++M+ + G + I +F M E D V + + +
Sbjct: 366 GIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLK 425
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
L + + +L +VH +K+ + V + S+++ Y + G +R VFD
Sbjct: 426 AL--SLSLPESLHSCTLVHCCAIKSGYAADVA----VSCSLIDAYTKSGQNEVSRKVFDE 479
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
+ ++ TS+I G+ +G G + +K M + P+ VT LS+LS CSHSGLV EG
Sbjct: 480 LDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEG 539
Query: 471 CKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASG 530
I+ S++ +GI P + CMVDL GR G+V++A ++L+ D W +LL +
Sbjct: 540 ELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCR 599
Query: 531 VYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGW 590
++ N+T+G A+ L+ LEP+N + +S G + ++R + ++L ++ G+
Sbjct: 600 IHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIGY 659
Query: 591 SCIEVK 596
S + VK
Sbjct: 660 SSVVVK 665
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/435 (23%), Positives = 208/435 (47%), Gaps = 24/435 (5%)
Query: 79 LYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-R 137
+Y N ID +K + A FD M RDVV++ +I+G A +L+ +M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 138 VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEE 197
L ++ T +L C G Q+H + G + V+++++ +YA +
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 198 VELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFA 257
LF E+ R++A N+L+ + G+ R+ + M+ LEG + N T +I +
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRME-LEGVAKNGLTYCYMIRGCS 224
Query: 258 KCGNLSKGEGVHCLVIKTG--FSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLG 315
+ +G+ +H LV+K+G S+ + L+D+Y+ CG L S++ F + K I+
Sbjct: 225 HDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWN 284
Query: 316 AMMSGFIQNGSFMEAIALFQQMQ--AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLM 373
+++S GS ++++ LF +MQ + I P + + L+ C+ ++ G+ +H Y++
Sbjct: 285 SIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRP--FMSFLNFCSRNSDIQSGKQIHCYVL 342
Query: 374 KNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGF 433
K F+ +LH+++++++MY + I ++ ++ +P ++ S++ G
Sbjct: 343 KMGFD---VSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITK 399
Query: 434 EALKYFNLMMEHRMQPNSVTFLSLLSACS-------HSGLVSEGCKIYYSMKWGFGIEPA 486
+ ++ F LM++ + VT ++L A S HS + C I K G+ + A
Sbjct: 400 DIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAI----KSGYAADVA 455
Query: 487 LDHHTCMVDLFGRCG 501
+ ++D + + G
Sbjct: 456 VS--CSLIDAYTKSG 468
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 158/307 (51%), Gaps = 7/307 (2%)
Query: 202 FSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGN 261
F E++ RDV ++N+LIS S G +R L EM S G + T V+S +
Sbjct: 69 FDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSC-GLRESASTFPSVLSVCSDELF 127
Query: 262 LSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSG 320
+G VHC VI GF ++ ++++L+ YA +D++++LF E+ ++ ++
Sbjct: 128 CREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRC 187
Query: 321 FIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
F Q G ++ +M+ E + + ++ C++ + G+ +H ++K+ +N
Sbjct: 188 FCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWN-- 245
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFN 440
N+ + +++ Y G++S + F+ +P KDVI+W S++ +G ++L F+
Sbjct: 246 -ISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFS 304
Query: 441 LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGR 499
M +P+ F+S L+ CS + + G +I+ Y +K GF + +L + ++D++G+
Sbjct: 305 KMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDV-SSLHVQSALIDMYGK 363
Query: 500 CGMVKEA 506
C ++ +
Sbjct: 364 CNGIENS 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 396 IRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFL 455
I+ GN+ SA FD M V+DV+ + +I G +G A++ + M+ ++ ++ TF
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 456 SLLSACSHSGLVSEGCKIYYS-MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV 514
S+LS CS EG +++ + GFG + + +V L+ +V AL + +M+
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFV--RSALVGLYACLRLVDVALKLFDEML 174
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 113/252 (44%), Gaps = 13/252 (5%)
Query: 287 LDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVP 346
+D K G L + + F E+ + +T ++SG + G + AI L+ +M + L
Sbjct: 53 IDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESA 112
Query: 347 EIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARA 406
+ ++L C++ + G VH ++ F N+ + ++++ +Y + A
Sbjct: 113 STFPSVLSVCSDELFCREGIQVHCRVISLGFG----CNMFVRSALVGLYACLRLVDVALK 168
Query: 407 VFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ---PNSVTFLSLLSACSH 463
+FD M +++ ++ F G E+ + F + + ++ N +T+ ++ CSH
Sbjct: 169 LFDEMLDRNLAVCNLLLRCFCQTG---ESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 464 SGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIW 522
LV EG +++ +K G+ I + +VD + CG + ++ V D W
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANV-LVDYYSACGDLSGSMR-SFNAVPEKDVISW 283
Query: 523 GALLAASGVYGN 534
++++ YG+
Sbjct: 284 NSIVSVCADYGS 295
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 191/337 (56%), Gaps = 17/337 (5%)
Query: 265 GEGVHCLVIK---TGFSDDVLQTSLLDFYAKCGKLDISVQLF---REIHFKSYITLGAMM 318
G +H V+K D +Q +L+ FYA CGKL + LF RE ++ TL A
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 319 SGFIQNGSFMEAIALFQQMQAE--DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNL 376
+ + S E + LF +MQ +L +V L+ +CANLG G H Y++KN
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVRPNELSLVA-----LIKSCANLGEFVRGVWAHVYVLKN- 245
Query: 377 FNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEAL 436
+ N + TS++++Y + G +S AR VFD M +DV + +MI G HGFG E +
Sbjct: 246 ---NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGI 302
Query: 437 KYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDL 496
+ + ++ + P+S TF+ +SACSHSGLV EG +I+ SMK +GIEP ++H+ C+VDL
Sbjct: 303 ELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDL 362
Query: 497 FGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYH 556
GR G ++EA I KM + P++ +W + L +S +G+ GE + LL LE +N+G +
Sbjct: 363 LGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNY 422
Query: 557 TLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
LLSN+ A RW +VE+ R M + + K PG S +
Sbjct: 423 VLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 139/300 (46%), Gaps = 9/300 (3%)
Query: 23 QFHSALSTFKKM---RQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQM--GLDL 77
Q H A S + ++ R V + FT+P + +A +G+ H ++ ++
Sbjct: 89 QTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGRALHAHVLKFLEPVNH 148
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACD-LFNKM 136
D + ++ FY C + AR +F+ + D+ +W +++A Y + + + L M
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFM 208
Query: 137 RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTE 196
R+++ PN ++L+ ++++C G H Y +K+ + ++ V S++ +Y+ G
Sbjct: 209 RMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLS 268
Query: 197 EVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAF 256
+F E+++RDV+ +N +I ++ G L + S +G + T + ISA
Sbjct: 269 FARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLIS-QGLVPDSATFVVTISAC 327
Query: 257 AKCGNLSKGEGV-HCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITL 314
+ G + +G + + + G V L+D + G+L+ + + +++ K TL
Sbjct: 328 SHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATL 387
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/313 (20%), Positives = 140/313 (44%), Gaps = 15/313 (4%)
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYI 312
++ +KC +L + +H +I G S S L + L ++ + R+I S
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPSVF 72
Query: 313 TLGAMMSGFIQNGSFME---AIALFQQMQA--EDLVIVPEIWRNLLDACANLGAL--KLG 365
++S + N + + A +L+ Q+ + + V E L + A + G
Sbjct: 73 LYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHG 132
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
R +H +++K F PV + ++ +++ Y G + AR++F+R+ D+ W +++
Sbjct: 133 RALHAHVLK--FLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAA 190
Query: 426 FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIE 484
+ + + L M +++PN ++ ++L+ +C++ G G + Y +K +
Sbjct: 191 YANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLN 250
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
+ T ++DL+ +CG + A + +M D + A++ V+G G +
Sbjct: 251 QFVG--TSLIDLYSKCGCLSFARKVFDEMS-QRDVSCYNAMIRGLAVHGFGQEGIELYKS 307
Query: 545 LLE--LEPDNAGY 555
L+ L PD+A +
Sbjct: 308 LISQGLVPDSATF 320
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 147/503 (29%), Positives = 264/503 (52%), Gaps = 19/503 (3%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCA 156
A +FD + RD+ S S ++ ++ + + LF ++ R + +S T +L AC
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 157 STPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNIL 216
+ G Q+H +K G K +++ MY+ G + +F + ++D+ SWN L
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 217 ISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG 276
+S + G G+ M E + TL+ V+ A L +G+ VH +V+ TG
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYR-ERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 277 FSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKS-YITLGAMMSGFIQNGSFMEAIALFQ 335
VL T+++ FY+ G ++ +++++ ++ + + L +++SG I+N ++ EA L
Sbjct: 216 RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMS 275
Query: 336 QMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMY 395
+ + V+ L C++ L +G+ +H ++N F + + +++MY
Sbjct: 276 RQRPNVRVLSSS-----LAGCSDNSDLWIGKQIHCVALRNGF----VSDSKLCNGLMDMY 326
Query: 396 IRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHR--MQPNSVT 453
+ G I AR +F +P K V++WTSMI+ + +G G +AL+ F M E + PNSVT
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVT 386
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
FL ++SAC+H+GLV EG + + MK + + P +H+ C +D+ + G +E ++ +M
Sbjct: 387 FLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM 446
Query: 514 VILPDSR----IWGALLAASGVYGNKTLGEYTAQRLL-ELEPDNAGYHTLLSNVKASAGR 568
+ + IW A+L+A + + T GEY A+RL+ E P+NA + L+SN A+ G+
Sbjct: 447 MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGK 506
Query: 569 WNEVEELRREMSEKDLKKKPGWS 591
W+ VEELR ++ K L K G S
Sbjct: 507 WDVVEELRGKLKNKGLVKTAGHS 529
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 173/361 (47%), Gaps = 14/361 (3%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYF 81
G + L+ F ++ + + TF V A S + G+ H + I+ G +
Sbjct: 63 GNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPET-GRQVHALMIKQGAETGTIS 121
Query: 82 CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-RVEL 140
+ID Y K + + RVF+ + +D+VSW ++++G++ A +F M R +
Sbjct: 122 KTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERV 181
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV-KNSVLRMYADKGSTEEVE 199
E + TL +++ C + L G Q+H V +G D V +++ Y+ G E
Sbjct: 182 EISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG--RDLVVLGTAMISFYSSVGLINEAM 239
Query: 200 LLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKC 259
+++ +N V + ++++ S++ +R + N+ L+ ++ +
Sbjct: 240 KVYNSLN---VHTDEVMLN--SLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDN 294
Query: 260 GNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
+L G+ +HC+ ++ GF SD L L+D Y KCG++ + +FR I KS ++ +M+
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKNL 376
+ NG ++A+ +F++M E ++P + ++ ACA+ G +K G+ G +MK
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFG-MMKEK 413
Query: 377 F 377
+
Sbjct: 414 Y 414
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 8/265 (3%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E + ++WN + + G+ AL F M + V FT V + +S++ G
Sbjct: 146 EEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKI-LQQG 204
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFD-LMLHRDVVSWTSMIAGYIS 122
K H + + G DL + MI FY I A +V++ L +H D V S+I+G I
Sbjct: 205 KQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIR 263
Query: 123 ERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
R+ A L ++ R PN L L C ++ L +G QIH A+++G + D +
Sbjct: 264 NRNYKEAFLLMSRQR----PNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLC 319
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM-QSLEG 241
N ++ MY G + +F I + V SW +I Y++ GD ++ + EM + G
Sbjct: 320 NGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSG 379
Query: 242 HSWNIETLTLVISAFAKCGNLSKGE 266
N T +VISA A G + +G+
Sbjct: 380 VLPNSVTFLVVISACAHAGLVKEGK 404
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 172/359 (47%), Gaps = 25/359 (6%)
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
N VLR + + LF E+ +RD++S N +S + G+ L ++
Sbjct: 22 NLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHR-ASP 80
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQ 301
+ T T V+ A + G VH L+IK G + + +T+L+D Y+K G L SV+
Sbjct: 81 DLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVR 140
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+F + K ++ A++SGF++NG EA+ +F M E + I +++ CA+L
Sbjct: 141 VFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKI 200
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV-KDVIAWT 420
L+ G+ VH ++ + V G T++++ Y G I+ A V++ + V D +
Sbjct: 201 LQQGKQVHAMVVVTGRDLVVLG-----TAMISFYSSVGLINEAMKVYNSLNVHTDEVMLN 255
Query: 421 SMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKW 479
S+I G + EA ++ R +PN S L+ CS + + G +I+ +++
Sbjct: 256 SLISGCIRNRNYKEA-----FLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRN 310
Query: 480 GFGIEPALDHHTC--MVDLFGRCGMVKEALSIILKMVILPDSRI--WGALLAASGVYGN 534
GF D C ++D++G+CG + +A +I +P + W +++ A V G+
Sbjct: 311 GF----VSDSKLCNGLMDMYGKCGQIVQARTIFRA---IPSKSVVSWTSMIDAYAVNGD 362
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 36/260 (13%)
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMI 117
+D GK HCVA++ G D CN ++D Y KC I AR +F + + VVSWTSMI
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 118 AGYISERHVSVACDLFNKMRVE---LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG 174
Y A ++F +M E + PNSVT +V++ AC + + G + G +
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 175 VLMDWSVKN-SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLI 233
L+ + + + + G TEE+ + +V MM
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETEEI---------------------WRLVERMME----- 448
Query: 234 NEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV-HCLVIKTGFSDDVLQTSLLDFYAK 292
N+ QS+ W V+SA + +L++GE V L+ +TG + + + +FYA
Sbjct: 449 NDNQSIPCAIW-----VAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAA 503
Query: 293 CGKLDISVQLFREIHFKSYI 312
GK D+ +L ++ K +
Sbjct: 504 MGKWDVVEELRGKLKNKGLV 523
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 138/484 (28%), Positives = 231/484 (47%), Gaps = 47/484 (9%)
Query: 136 MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGST 195
+R+ ++P+ +T +L++ +G +H +K+ V D V+ S++ MYA G
Sbjct: 118 LRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQL 177
Query: 196 EEVELLFSE----INKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTL 251
+ +F E I K + WN+LI+ Y DM L M SW
Sbjct: 178 KHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSW------- 230
Query: 252 VISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSY 311
++L+ Y G+L+ + QLF + K+
Sbjct: 231 --------------------------------STLIKGYVDSGELNRAKQLFELMPEKNV 258
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
++ +++GF Q G + AI+ + +M + L +L AC+ GAL G +HGY
Sbjct: 259 VSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGY 318
Query: 372 LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGF 431
++ N ++ + + T++++MY + G + A VF M KD+++WT+MI+G+ HG
Sbjct: 319 ILDN----GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGR 374
Query: 432 GFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHT 491
+A++ F MM +P+ V FL++L+AC +S V G + SM+ + IEP L H+
Sbjct: 375 FHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYV 434
Query: 492 CMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPD 551
+VDL GR G + EA ++ M I PD W AL A + E +Q LLEL+P+
Sbjct: 435 LVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPE 494
Query: 552 NAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPE 611
G + L AS G +VE+ R + ++ ++ GWS IE+ G F +GD +H
Sbjct: 495 LCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKL 554
Query: 612 AEEI 615
+EI
Sbjct: 555 TQEI 558
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 188/432 (43%), Gaps = 49/432 (11%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E N N IR + +F S++ F M ++GV D TFP V ++ S + + G
Sbjct: 87 EERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWL-G 145
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVF----DLMLHRDVVSWTSMIAG 119
+ H ++ +D D + +++D Y K + A +VF D + ++ W +I G
Sbjct: 146 RALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLING 205
Query: 120 YISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
Y + + +A LF M E NS + W
Sbjct: 206 YCRAKDMHMATTLFRSMP---ERNSGS--------------------------------W 230
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
S ++++ Y D G + LF + +++V SW LI+ +S GD EM
Sbjct: 231 S---TLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLE- 286
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDI 298
+G N T+ V+SA +K G L G +H ++ G D + T+L+D YAKCG+LD
Sbjct: 287 KGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDC 346
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACAN 358
+ +F ++ K ++ AM+ G+ +G F +AI F+QM ++ +L AC N
Sbjct: 347 AATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLN 406
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVI 417
+ LG + + +E L ++++ R G ++ A + + MP+ D+
Sbjct: 407 SSEVDLGL---NFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLT 463
Query: 418 AWTSMIEGFGSH 429
W ++ +H
Sbjct: 464 TWAALYRACKAH 475
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 144/346 (41%), Gaps = 70/346 (20%)
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYI 312
IS C + + VH +++ G + L+ + D S+ +FR ++
Sbjct: 33 ISLIHACKDTASLRHVHAQILRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSEERNPF 92
Query: 313 TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHG 370
L A++ G +N F ++ F M L + P+ + +L + + LG LGR +H
Sbjct: 93 VLNALIRGLTENARFESSVRHFILMLR--LGVKPDRLTFPFVLKSNSKLGFRWLGRALHA 150
Query: 371 YLMKN----------------------------------------------LFNGPVEG- 383
+KN L NG
Sbjct: 151 ATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK 210
Query: 384 NLHMET---------------SILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGS 428
++HM T +++ Y+ G ++ A+ +F+ MP K+V++WT++I GF
Sbjct: 211 DMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQ 270
Query: 429 HGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPAL 487
G A+ + M+E ++PN T ++LSACS SG + G +I+ Y + G ++ A+
Sbjct: 271 TGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAI 330
Query: 488 DHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYG 533
T +VD++ +CG + A ++ M D W A++ V+G
Sbjct: 331 G--TALVDMYAKCGELDCAATVFSNMN-HKDILSWTAMIQGWAVHG 373
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 212 bits (540), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 204/417 (48%), Gaps = 43/417 (10%)
Query: 207 KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGE 266
+RD+ WN +IS Y +G+M+ L ++M + SWN
Sbjct: 87 ERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWN--------------------- 125
Query: 267 GVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGS 326
++L+ YA G ++ ++F ++ ++ + ++ G+ QNG
Sbjct: 126 ------------------TVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGR 167
Query: 327 FMEAIALFQQMQAEDLVIVPEIWRNL-LDACANLGALKLGRVVHGYLMKNLFNGPVEGNL 385
E + F++M E V+ + L L ACA LGA G+ VH Y +N + ++
Sbjct: 168 VSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYN---KVDV 224
Query: 386 HMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH 445
+++ ++++MY + G I A VF + +D+I+W +MI G +HG G EAL F+ M
Sbjct: 225 NVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNS 284
Query: 446 RMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKE 505
+ P+ VTF+ +L AC H GLV +G + SM F I P ++H C+VDL R G + +
Sbjct: 285 GISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQ 344
Query: 506 ALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKAS 565
A+ I KM + D+ IW LL AS VY +GE + L++LEP N +LSN+
Sbjct: 345 AVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGD 404
Query: 566 AGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTL 622
AGR+++ L+ M + KK+ G S IE F S HP EE+ L L
Sbjct: 405 AGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILREL 461
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 23/350 (6%)
Query: 83 NTMIDFYVKCW--CIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVEL 140
N M F + C I A +VF M+ ++VV WTSMI GY+ + + A F +L
Sbjct: 30 NQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYF-----DL 84
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGV----LMDWSVKNSVLRMYADKGSTE 196
P ++L S + +G + ++ + +M W N+VL YA+ G E
Sbjct: 85 SPER---DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSW---NTVLEGYANIGDME 138
Query: 197 EVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAF 256
E +F ++ +R+V SWN LI Y+ G + V G M N T+TLV+SA
Sbjct: 139 ACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSAC 198
Query: 257 AKCGNLSKGEGVHCLVIKTGFS--DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITL 314
AK G G+ VH G++ D ++ +L+D Y KCG ++I++++F+ I + I+
Sbjct: 199 AKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISW 258
Query: 315 GAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
M++G +G EA+ LF +M+ + + +L AC ++G ++ G +
Sbjct: 259 NTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT 318
Query: 375 NLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMI 423
+ P + ++++ R G ++ A ++MPVK D + W +++
Sbjct: 319 DFSIMP---EIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 3/164 (1%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
D+ NT+++ Y + RVFD M R+V SW +I GY VS F +M
Sbjct: 120 DVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMV 179
Query: 138 VE--LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGV-LMDWSVKNSVLRMYADKGS 194
E + PN T+ ++L AC + G +H Y G +D +VKN+++ MY G+
Sbjct: 180 DEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGA 239
Query: 195 TEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQS 238
E +F I +RD+ SWN +I+ + G L +EM++
Sbjct: 240 IEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKN 283
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 139/318 (43%), Gaps = 32/318 (10%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMG--VPHDTFTFPVVNRALSSMRADAVYGK 64
N +WN I+ + G+ L +FK+M G VP+D T +V A + + A +GK
Sbjct: 151 NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDA-TMTLVLSACAKLGA-FDFGK 208
Query: 65 MTHCVAIQMGLD-LDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
H +G + +D+ N +ID Y KC I A VF + RD++SW +MI G +
Sbjct: 209 WVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAH 268
Query: 124 RHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
H + A +LF++M+ + P+ VT + +L AC ++G G A + + D+S+
Sbjct: 269 GHGTEALNLFHEMKNSGISPDKVTFVGVLCAC-----KHMGLVEDGLAYFNSMFTDFSIM 323
Query: 183 NS------VLRMYADKGS-TEEVELLFSEINKRDVASWNILI---SFYSMVGDMMRVAGL 232
V+ + + G T+ VE + K D W L+ Y V D+ VA
Sbjct: 324 PEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKV-DIGEVA-- 380
Query: 233 INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV------LQTSL 286
+ E+ LE N ++ + + G + + TGF + L
Sbjct: 381 LEELIKLEPR--NPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGL 438
Query: 287 LDFYAKCGKLDISVQLFR 304
+ FY+ K + +L R
Sbjct: 439 VKFYSSGEKHPRTEELQR 456
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 127/268 (47%), Gaps = 20/268 (7%)
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
++F E+ K+ + +M++G++ N + A F D+V +W ++ G
Sbjct: 49 KVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIV----LWNTMIS-----G 99
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWT 420
+++G ++ ++LF+ ++ ++L Y G++ + VFD MP ++V +W
Sbjct: 100 YIEMGNMLEA---RSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWN 156
Query: 421 SMIEGFGSHGFGFEALKYFNLMM-EHRMQPNSVTFLSLLSACSHSGLVSEGCKIY-YSMK 478
+I+G+ +G E L F M+ E + PN T +LSAC+ G G ++ Y
Sbjct: 157 GLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGET 216
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGAL---LAASGVYGNK 535
G+ + ++ ++D++G+CG ++ A+ + K + D W + LAA G +G +
Sbjct: 217 LGYN-KVDVNVKNALIDMYGKCGAIEIAME-VFKGIKRRDLISWNTMINGLAAHG-HGTE 273
Query: 536 TLGEYTAQRLLELEPDNAGYHTLLSNVK 563
L + + + PD + +L K
Sbjct: 274 ALNLFHEMKNSGISPDKVTFVGVLCACK 301
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 209 bits (532), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 125/378 (33%), Positives = 211/378 (55%), Gaps = 10/378 (2%)
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFK 309
T +I+A+AK G L V + K D + +++ Y + G + +++LF + K
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSK---RDVPVWNAMITGYQRRGDMKAAMELFDSMPRK 177
Query: 310 SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR-NLLDACANLGALKLGRVV 368
+ + ++SGF QNG++ EA+ +F M+ + V I ++L ACANLG L++GR +
Sbjct: 178 NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRL 237
Query: 369 HGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM-PVKDVIAWTSMIEGFG 427
GY +N F N+++ + + MY + G I A+ +F+ + +++ +W SMI
Sbjct: 238 EGYARENGFFD----NIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLA 293
Query: 428 SHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPAL 487
+HG EAL F M+ +P++VTF+ LL AC H G+V +G +++ SM+ I P L
Sbjct: 294 THGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKL 353
Query: 488 DHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE 547
+H+ CM+DL GR G ++EA +I M + PD+ +WG LL A +GN + E ++ L +
Sbjct: 354 EHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFK 413
Query: 548 LEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVS-YGFLSGD 606
LEP N G ++SN+ A+ +W+ V +R+ M ++ + K G+S GV + F D
Sbjct: 414 LEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVED 473
Query: 607 ITHPEAEEIYAALCTLSR 624
+HP + EIY L + R
Sbjct: 474 KSHPRSYEIYQVLEEIFR 491
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 165/411 (40%), Gaps = 80/411 (19%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
++ H + G + D + C T+I Y K + CARRVFD M RDV W +MI GY
Sbjct: 102 RLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRR 161
Query: 124 RHVSVACDLFNKMRVE---------------------------------LEPNSVTLIVM 150
+ A +LF+ M + ++PN +T++ +
Sbjct: 162 GDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSV 221
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI-NKRD 209
L AC L +G ++ GYA ++G + V N+ + MY+ G + + LF E+ N+R+
Sbjct: 222 LPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRN 281
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ SWN SM+G SL H + E LTL FA+ L +GE
Sbjct: 282 LCSWN------SMIG-------------SLATHGKHDEALTL----FAQM--LREGEK-- 314
Query: 270 CLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYIT-----LGAMMSGFIQN 324
D V LL G + +LF+ + I+ G M+ +
Sbjct: 315 --------PDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRV 366
Query: 325 GSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGN 384
G EA L + M + +V W LL AC+ G +++ + L K P GN
Sbjct: 367 GKLQEAYDLIKTMPMKPDAVV---WGTLLGACSFHGNVEIAEIASEALFKLEPTNP--GN 421
Query: 385 LHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIE-GFGSHGFGFE 434
+ ++I + + R + + + ++ +E G H F E
Sbjct: 422 CVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVE 472
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 150/369 (40%), Gaps = 40/369 (10%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCA 156
AR++FD + + +I Y + L+N + + L P+ T + A +
Sbjct: 35 ARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASAS 94
Query: 157 STPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNIL 216
+ +H +SG D +++ YA G+ +F E++KRDV WN +
Sbjct: 95 FSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAM 154
Query: 217 ISFYSMVGDMMRVAGLINEMQSLEGHSW-------------------------------N 245
I+ Y GDM L + M SW N
Sbjct: 155 ITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPN 214
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFR 304
T+ V+ A A G L G + + GF D++ + + ++ Y+KCG +D++ +LF
Sbjct: 215 HITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFE 274
Query: 305 EI-HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
E+ + ++ + +M+ +G EA+ LF QM E + LL AC + G +
Sbjct: 275 ELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVV 334
Query: 364 LGRVVHGYLMKNLFN-GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTS 421
G+ L K++ + L ++++ R G + A + MP+K D + W +
Sbjct: 335 KGQ----ELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGT 390
Query: 422 MIEGFGSHG 430
++ HG
Sbjct: 391 LLGACSFHG 399
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 69/152 (45%), Gaps = 4/152 (2%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKM-RQMGVPHDTFTFPVVNRALSSMRADAVYGK 64
N +W I G + AL F M + V + T V A +++ + G+
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANL-GELEIGR 235
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVF-DLMLHRDVVSWTSMIAGYISE 123
A + G ++Y CN I+ Y KC I A+R+F +L R++ SW SMI +
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 124 RHVSVACDLFNKMRVELE-PNSVTLIVMLQAC 154
A LF +M E E P++VT + +L AC
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLAC 327
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 158/588 (26%), Positives = 273/588 (46%), Gaps = 47/588 (7%)
Query: 2 EEEP-NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
EE P + +WN I G F++M + GV +F V ++ + D
Sbjct: 120 EEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKS-CGLILDL 178
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+ HC ++ G ++ +++D Y KC + ARRVFD +++ VSW ++ Y
Sbjct: 179 RLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRY 238
Query: 121 ISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
+ A +F KM + + P + T+ ++ AC S L VG IH AVK V+ D
Sbjct: 239 LEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADT 298
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG---------DMMRVA 230
V SV MY E +F + +D+ SW +S Y+M G D+M
Sbjct: 299 VVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER 358
Query: 231 GLINEMQSLEG----HSW---------------NIETLTLV--ISAFAKCGNLSKGEGVH 269
+++ L G H W NI+ +TLV ++ + ++ G+ H
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAH 418
Query: 270 CLVIKTGFSDDVL-QTSLLDFYAKCGKLDISVQLFREI-HFKSYITLGAMMSGFIQNGSF 327
+ + G+ +V+ +LLD Y KCG L + FR++ + ++ A+++G + G
Sbjct: 419 GFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRS 478
Query: 328 MEAIALFQQMQAEDLVIVPEIWR--NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNL 385
+A++ F+ MQ E P + LL CAN+ AL LG+ +HG+L+++ + V
Sbjct: 479 EQALSFFEGMQVE---AKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVV--- 532
Query: 386 HMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH 445
+ ++++MY + A VF +D+I W S+I G +G E + F L+
Sbjct: 533 -IRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENE 591
Query: 446 RMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKE 505
++P+ VTFL +L AC G V G + + SM + I P ++H+ CM++L+ + G + +
Sbjct: 592 GVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQ 651
Query: 506 ALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE---LEP 550
+L M P ++ + A Y LG + A+RL+ L+P
Sbjct: 652 LEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLMNDHYLQP 699
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 220/485 (45%), Gaps = 48/485 (9%)
Query: 79 LYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-R 137
++ N I+ Y KC C+ AR +F+ M RD SW ++I +F +M R
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 138 VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEE 197
+ + +L++C L + Q+H VK G + ++ S++ +Y +
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 198 VELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFA 257
+F EI SWN+++ Y +G + +M L N T++ V+ A +
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLN-HTVSSVMLACS 274
Query: 258 KCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGA 316
+ L G+ +H + +K +D V+ TS+ D Y KC +L+ + ++F + K + +
Sbjct: 275 RSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTS 334
Query: 317 MMSGFIQNGSFMEAIALFQQMQAEDLVI-------------------------------- 344
MSG+ +G EA LF M ++V
Sbjct: 335 AMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENID 394
Query: 345 -VPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
V +W +L+ C+ + +++G+ HG++ ++ + + N+ + ++L+MY + G + S
Sbjct: 395 NVTLVW--ILNVCSGISDVQMGKQAHGFIYRHGY----DTNVIVANALLDMYGKCGTLQS 448
Query: 404 ARAVFDRMP-VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
A F +M ++D ++W +++ G G +AL +F M+ +P+ T +LL+ C+
Sbjct: 449 ANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFE-GMQVEAKPSKYTLATLLAGCA 507
Query: 463 HSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI 521
+ ++ G I+ + ++ G+ I+ + MVD++ +C A+ + K D +
Sbjct: 508 NIPALNLGKAIHGFLIRDGYKIDVVI--RGAMVDMYSKCRCFDYAIE-VFKEAATRDLIL 564
Query: 522 WGALL 526
W +++
Sbjct: 565 WNSII 569
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 202/455 (44%), Gaps = 42/455 (9%)
Query: 141 EPNSVTLIVMLQACCASTPLNV-GTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
EP S L L C+S L V ++ + V L + N + Y G ++
Sbjct: 57 EPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDAR 116
Query: 200 LLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKC 259
LF E+ +RD SWN +I+ + G V + M +G + V+ +
Sbjct: 117 ELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR-DGVRATETSFAGVLKSCGLI 175
Query: 260 GNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
+L +HC V+K G+S +V L+TS++D Y KC + + ++F EI S ++ ++
Sbjct: 176 LDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIV 235
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFN 378
+++ G EA+ +F +M ++ + +++ AC+ AL++G+V+H +K
Sbjct: 236 RRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKL--- 292
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKY 438
V + + TS+ +MY++ + SAR VFD+ KD+ +WTS + G+ G EA +
Sbjct: 293 -SVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREAREL 351
Query: 439 FNLMMEHRM-------------------------------QPNSVTFLSLLSACSHSGLV 467
F+LM E + ++VT + +L+ CS V
Sbjct: 352 FDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDV 411
Query: 468 SEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLA 527
G K + + G + + ++D++G+CG ++ A +M L D W ALL
Sbjct: 412 QMG-KQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLT 470
Query: 528 ASGVYGN--KTLGEYTAQRLLELEPDNAGYHTLLS 560
G + L + + +E +P TLL+
Sbjct: 471 GVARVGRSEQALSFFEGMQ-VEAKPSKYTLATLLA 504
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 142/529 (26%), Positives = 254/529 (48%), Gaps = 50/529 (9%)
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYV---KCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
+ H ++ GL D + + ++ F + + A + + + + + S+I Y
Sbjct: 56 QQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAY 115
Query: 121 ISERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
+ VA +F +M + + P+ + +L+AC A G QIHG +KSG++ D
Sbjct: 116 ANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDV 175
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
V+N+++ +Y G E + + RD SWN L+S Y G + L +EM+
Sbjct: 176 FVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEER 235
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDIS 299
SWN +IS +A G + + +
Sbjct: 236 NVESWN-----FMISGYAAAGLVKEAK--------------------------------- 257
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR--NLLDACA 357
++F + + ++ AM++ + G + E + +F +M +D P+ + ++L ACA
Sbjct: 258 -EVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM-LDDSTEKPDGFTLVSVLSACA 315
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVI 417
+LG+L G VH Y+ K+ +EG + T++++MY + G I A VF +DV
Sbjct: 316 SLGSLSQGEWVHVYIDKHGIE--IEG--FLATALVDMYSKCGKIDKALEVFRATSKRDVS 371
Query: 418 AWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM 477
W S+I HG G +AL+ F+ M+ +PN +TF+ +LSAC+H G++ + K++ M
Sbjct: 372 TWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMM 431
Query: 478 KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTL 537
+ +EP ++H+ CMVDL GR G ++EA ++ ++ S + +LL A +G
Sbjct: 432 SSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQ 491
Query: 538 GEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKK 586
E A RLLEL ++ + +SN+ AS GRW +V + RR M + + +
Sbjct: 492 AERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 205/447 (45%), Gaps = 44/447 (9%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N N IR + + AL+ F++M V D ++F V +A ++ G+
Sbjct: 104 NGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAF-CGFEEGRQI 162
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + I+ GL D++ NT+++ Y + AR+V D M RD VSW S+++ Y+ + V
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 127 SVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVL 186
A LF+ E+E +V W N ++
Sbjct: 223 DEARALFD----EMEERNVE-------------------------------SW---NFMI 244
Query: 187 RMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
YA G +E + +F + RDV SWN +++ Y+ VG V + N+M +
Sbjct: 245 SGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDG 304
Query: 247 ETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFRE 305
TL V+SA A G+LS+GE VH + K G + L T+L+D Y+KCGK+D ++++FR
Sbjct: 305 FTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA 364
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
+ T +++S +G +A+ +F +M E + +L AC ++G L
Sbjct: 365 TSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQA 424
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV-IAWTSMIE 424
R + +M +++ VE + ++++ R G I A + + +P + I S++
Sbjct: 425 RKLFE-MMSSVYR--VEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLG 481
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNS 451
G +A + N ++E ++ +S
Sbjct: 482 ACKRFGQLEQAERIANRLLELNLRDSS 508
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 200/359 (55%), Gaps = 5/359 (1%)
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREI 306
++++ + A +L G G+H ++K D V+ LL Y + G D + ++F +
Sbjct: 238 SISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM 297
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
++ +T +++S + E LF++MQ E + +L AC+ + AL G+
Sbjct: 298 SERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGK 357
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF 426
+H ++K+ + ++ + S+++MY + G + +R VFD M KD+ +W M+ +
Sbjct: 358 EIHAQILKS----KEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCY 413
Query: 427 GSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPA 486
+G E + F M+E + P+ +TF++LLS CS +GL G ++ MK F + PA
Sbjct: 414 AINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPA 473
Query: 487 LDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLL 546
L+H+ C+VD+ GR G +KEA+ +I M P + IWG+LL + ++GN ++GE A+ L
Sbjct: 474 LEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELF 533
Query: 547 ELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSG 605
LEP N G + ++SN+ A A W+ V+++R M ++ +KK+ G S ++VK F++G
Sbjct: 534 VLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAG 592
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 168/355 (47%), Gaps = 12/355 (3%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVS---WTSMIAGYISERHVSVACDLFNKMRVE 139
+ +I + C + AR++FD + +++ W +M GY A ++ M
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 140 -LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEV 198
+EP + ++ V L+AC L VG IH VK +D V N +L++Y + G ++
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 199 ELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ-SLEGHSWNIETLTLVISAFA 257
+F +++R+V +WN LIS S + + L +MQ + G SW TLT ++ A +
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSW--ATLTTILPACS 348
Query: 258 KCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGA 316
+ L G+ +H ++K+ DV L SL+D Y KCG+++ S ++F + K +
Sbjct: 349 RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 408
Query: 317 MMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNL 376
M++ + NG+ E I LF+ M + + LL C++ G + G + MK
Sbjct: 409 MLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFER-MKTE 467
Query: 377 FNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA-WTSMIEGFGSHG 430
F V L ++++ R G I A V + MP K + W S++ HG
Sbjct: 468 FR--VSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHG 520
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 165/394 (41%), Gaps = 37/394 (9%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYF 81
G AL + M + F+ V +A ++ D G+ H ++ +D
Sbjct: 215 GSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLK-DLRVGRGIHAQIVKRKEKVDQVV 273
Query: 82 CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELE 141
N ++ Y++ AR+VFD M R+VV+W S+I+ + V +LF KM+ E+
Sbjct: 274 YNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMI 333
Query: 142 PNS-VTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
S TL +L AC L G +IH +KS D + NS++ MY G E
Sbjct: 334 GFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRR 393
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+F + +D+ASWNI+++ Y++ G++ V L W IE S A
Sbjct: 394 VFDVMLTKDLASWNIMLNCYAINGNIEEVINLFE---------WMIE------SGVAP-- 436
Query: 261 NLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSG 320
+G+ + + +G SD L L + + K + V E H+ + +
Sbjct: 437 -----DGITFVALLSGCSDTGLTEYGLSLFERM-KTEFRVSPALE-HYACLVDILG---- 485
Query: 321 FIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
+ G EA+ + + M + IW +LL++C G + +G + L + P
Sbjct: 486 --RAGKIKEAVKVIETMPFKPSA---SIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNP 540
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
GN M ++I N+ R + + VK
Sbjct: 541 --GNYVMVSNIYADAKMWDNVDKIREMMKQRGVK 572
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 2/149 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N + WN I + H + F+KM++ + T + A S + A + GK
Sbjct: 301 NVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAA-LLTGKEI 359
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H ++ D+ N+++D Y KC + +RRVFD+ML +D+ SW M+ Y ++
Sbjct: 360 HAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNI 419
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQAC 154
+LF M + P+ +T + +L C
Sbjct: 420 EEVINLFEWMIESGVAPDGITFVALLSGC 448
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 214/385 (55%), Gaps = 14/385 (3%)
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTG--FSDDVLQTSLLDFYAKCGKLDISVQLFRE 305
T +I A K S G+ +HC V+K G SD +QT +L Y + L + ++F E
Sbjct: 118 TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDE 177
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWR--NLLDACANLGALK 363
I + +M+G+++ G E + +F++M I P+ + L ACA +GAL
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRG--IEPDEFSVTTALTACAQVGALA 235
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
G+ +H ++ K + +E ++ + T++++MY + G I +A VF+++ ++V +W ++I
Sbjct: 236 QGKWIHEFVKKKRW---IESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALI 292
Query: 424 EGFGSHGFGFEALKYFN-LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
G+ ++G+ +A + + E ++P+SV L +L+AC+H G + EG + +M+ +G
Sbjct: 293 GGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYG 352
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTA 542
I P +H++C+VDL R G + +AL +I KM + P + +WGALL + N LGE
Sbjct: 353 ITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAV 412
Query: 543 QRLLELEPDNAGYH----TLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGV 598
Q LL+LE N LSN+ S R E ++R + ++ ++K PGWS +EV G+
Sbjct: 413 QNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGI 472
Query: 599 SYGFLSGDITHPEAEEIYAALCTLS 623
F+SGD++HP +I+ + LS
Sbjct: 473 VTKFVSGDVSHPNLLQIHTLIHLLS 497
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 199/396 (50%), Gaps = 28/396 (7%)
Query: 53 LSSMRADAVYG-KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIG----CARRVFDLMLH 107
L+S R + V K TH + I GL + Y + ++ ++ + A +FD +
Sbjct: 16 LASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEI 75
Query: 108 RDVVSWTSMI--AGYISERHVSVACDLF--NKMRVELEPNSVTLIVMLQACCASTPLNVG 163
+ + +MI S+ H+ + L + ++ P+ +T ++ AC + +VG
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVG 135
Query: 164 TQIHGYAVKSGVLM-DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSM 222
QIH + VK+GV + D V+ VLR+Y + + +F EI + DV W++L++ Y
Sbjct: 136 KQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 223 VGDMMRVAGLINEM--QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF--S 278
G + EM + +E +++ T ++A A+ G L++G+ +H V K + S
Sbjct: 196 CGLGSEGLEVFKEMLVRGIEPDEFSVTT---ALTACAQVGALAQGKWIHEFVKKKRWIES 252
Query: 279 DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ 338
D + T+L+D YAKCG ++ +V++F ++ ++ + A++ G+ G +A +++
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 339 AEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKNL--FNGPVEGNLHMETSILNM 394
ED I P+ + +L ACA+ G L+ GR +++N+ G + H + I+++
Sbjct: 313 RED-GIKPDSVVLLGVLAACAHGGFLEEGRT----MLENMEARYGITPKHEHY-SCIVDL 366
Query: 395 YIRGGNISSARAVFDRMPVKDVIA-WTSMIEGFGSH 429
R G + A + ++MP+K + + W +++ G +H
Sbjct: 367 MCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 7/224 (3%)
Query: 1 MEEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRAD 59
+E P + + W++ + +V G L FK+M G+ D F+ A + + A
Sbjct: 175 FDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGAL 234
Query: 60 AVYGKMTH-CVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIA 118
A GK H V + ++ D++ ++D Y KC CI A VF+ + R+V SW ++I
Sbjct: 235 A-QGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIG 293
Query: 119 GYISERHVSVACDLFNKMRVE--LEPNSVTLIVMLQACCASTPLNVG-TQIHGYAVKSGV 175
GY + + A +++ E ++P+SV L+ +L AC L G T + + G+
Sbjct: 294 GYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGI 353
Query: 176 LMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVAS-WNILIS 218
+ ++ + G ++ L ++ + +AS W L++
Sbjct: 354 TPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLN 397
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 246/511 (48%), Gaps = 36/511 (7%)
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
G++ H + G+ ++ FYV+C + AR+VFD M RD+ MI
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 123 ERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
+ + D F +M + L+ ++ + +L+A G IH +K D +
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFI 154
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
+S++ MY+ G +FS++ ++D+ +N +IS Y+ L+ +M+ L G
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLL-G 213
Query: 242 HSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQ 301
++ T +IS F+ N K + L+ G+ DV
Sbjct: 214 IKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDV-------------------- 253
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
++ +++SG + N +A F+QM L LL AC L
Sbjct: 254 ----------VSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAY 303
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
+K G+ +HGY ++ G +E + + +++L+MY + G IS A +F + P K + + S
Sbjct: 304 MKHGKEIHGY---SVVTG-LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNS 359
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
MI + +HG +A++ F+ M + + +TF ++L+ACSH+GL G ++ M+ +
Sbjct: 360 MIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKY 419
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYT 541
I P L+H+ CMVDL GR G + EA +I M + PD +WGALLAA +GN L
Sbjct: 420 RIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIA 479
Query: 542 AQRLLELEPDNAGYHTLLSNVKASAGRWNEV 572
A+ L ELEP+N+G LL+++ A+AG W V
Sbjct: 480 AKHLAELEPENSGNGLLLTSLYANAGSWESV 510
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 193/413 (46%), Gaps = 41/413 (9%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYF 81
G + +L F++M + G+ D F P + +A ++ D +GKM HC+ ++ + D +
Sbjct: 96 GYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNL-LDREFGKMIHCLVLKFSYESDAFI 154
Query: 82 CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR-VEL 140
+++ID Y K +G AR+VF + +D+V + +MI+GY + A +L M+ + +
Sbjct: 155 VSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGI 214
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
+P+ +T + I G++ M ++ +E +EL
Sbjct: 215 KPDVITWNAL---------------ISGFS----------------HMRNEEKVSEILEL 243
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL-EGHSWNIETLTLVISAFAKC 259
+ + K DV SW +IS +V + Q L G N T+ ++ A
Sbjct: 244 MCLDGYKPDVVSWTSIIS--GLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTL 301
Query: 260 GNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
+ G+ +H + TG D ++++LLD Y KCG + ++ LFR+ K+ +T +M+
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMI 361
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFN 378
+ +G +A+ LF QM+A + + +L AC++ G LG+ + LM+N +
Sbjct: 362 FCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLF-LLMQNKYR 420
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIEGFGSHG 430
+ L ++++ R G + A + M ++ D+ W +++ +HG
Sbjct: 421 --IVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/346 (33%), Positives = 193/346 (55%), Gaps = 8/346 (2%)
Query: 286 LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQA-EDLVI 344
+++ K G+ ++ ++ R ++ IT M+ G+++N + EA+ + M + D+
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 345 VPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSA 404
+ + L ACA LG L + VH ++ + +E N + ++++++Y + G+I ++
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMI----DSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 405 RAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHS 464
R VF + DV W +MI GF +HG EA++ F+ M + P+S+TFL LL+ CSH
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 465 GLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGA 524
GL+ EG + + M F I+P L+H+ MVDL GR G VKEA +I M I PD IW +
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 525 LLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDL 584
LL++S Y N LGE Q L +G + LLSN+ +S +W +++R MS++ +
Sbjct: 340 LLSSSRTYKNPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 585 KKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSRVTQDFG 630
+K G S +E G+ + F +GD +H E + IY L L + T+ G
Sbjct: 397 RKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQG 442
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%), Gaps = 5/218 (2%)
Query: 208 RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEG 267
++V +WN++I Y + M S N + ++A A+ G+L +
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 268 VHCLVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGS 326
VH L+I +G + +L ++L+D YAKCG + S ++F + AM++GF +G
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 327 FMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLH 386
EAI +F +M+AE + + LL C++ G L+ G+ G LM F+ ++ L
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG-LMSRRFS--IQPKLE 303
Query: 387 METSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMI 423
+++++ R G + A + + MP++ DV+ W S++
Sbjct: 304 HYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQM-GVPHDTFTFPVVNRALSSMRADAVYGK 64
N + WNL I +V Q+ AL K M + + F+F A + + D + K
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL-GDLHHAK 185
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISER 124
H + I G++L+ + ++D Y KC IG +R VF + DV W +MI G+ +
Sbjct: 186 WVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHG 245
Query: 125 HVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHG 168
+ A +F++M E + P+S+T + +L C L G + G
Sbjct: 246 LATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFG 290
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 123/294 (41%), Gaps = 35/294 (11%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR--VEL 140
N +I+ +K G A++V ++V++W MI GY+ A M ++
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
+PN + L AC L+ +H + SG+ ++ + ++++ +YA G
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+F + + DV+ WN +I+ ++ G + +EM++ E S + T +++ + CG
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEA-EHVSPDSITFLGLLTTCSHCG 280
Query: 261 NLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSG 320
L +G+ L+ + S+Q E H+ GAM+
Sbjct: 281 LLEEGKEYFGLMSRR----------------------FSIQPKLE-HY------GAMVDL 311
Query: 321 FIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
+ G EA L + M E V+ IWR+LL + +LG + L K
Sbjct: 312 LGRAGRVKEAYELIESMPIEPDVV---IWRSLLSSSRTYKNPELGEIAIQNLSK 362
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/383 (31%), Positives = 210/383 (54%), Gaps = 10/383 (2%)
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTG--FSDDVLQTSLLDFYAKCGKLDISVQLFRE 305
T +I A K S G+ +HC V+K G SD +QT +L Y + L + ++F E
Sbjct: 118 TFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDE 177
Query: 306 IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
I + +M+G+++ G E + +F++M + L L ACA +GAL G
Sbjct: 178 IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQG 237
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEG 425
+ +H ++ K + +E ++ + T++++MY + G I +A VF ++ ++V +W ++I G
Sbjct: 238 KWIHEFVKKKSW---IESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGG 294
Query: 426 FGSHGFGFEALKYF-NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
+ ++G+ +A+ L E ++P+SV L +L+AC+H G + EG + +M+ + I
Sbjct: 295 YAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEIT 354
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
P +H++C+VDL R G + +AL++I KM + P + +WGALL + N LGE +
Sbjct: 355 PKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKN 414
Query: 545 LLELEPDNAGYH----TLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSY 600
LL+LE N LSN+ S R E ++R + ++ ++K PGWS +EV G
Sbjct: 415 LLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVT 474
Query: 601 GFLSGDITHPEAEEIYAALCTLS 623
F+SGD++HP +I+ + LS
Sbjct: 475 KFVSGDVSHPNLLQIHTVIHLLS 497
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 198/394 (50%), Gaps = 24/394 (6%)
Query: 53 LSSMRADAVYG-KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIG----CARRVFDLMLH 107
L+S R + V K TH + I GL + Y + ++ ++ + A +FD +
Sbjct: 16 LASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEI 75
Query: 108 RDVVSWTSMI--AGYISERHVSVACDLF--NKMRVELEPNSVTLIVMLQACCASTPLNVG 163
+ + +MI S+ H+ + L + ++ P+ +T ++ AC + +VG
Sbjct: 76 PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVG 135
Query: 164 TQIHGYAVKSGVLM-DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSM 222
QIH + VK+GV + D V+ VLR+Y + + +F EI + DV W++L++ Y
Sbjct: 136 KQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVR 195
Query: 223 VGDMMRVAGLINEM--QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF--S 278
G + EM + LE +++ T ++A A+ G L++G+ +H V K + S
Sbjct: 196 CGLGSEGLEVFREMLVKGLEPDEFSVTT---ALTACAQVGALAQGKWIHEFVKKKSWIES 252
Query: 279 DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ 338
D + T+L+D YAKCG ++ +V++F+++ ++ + A++ G+ G +A+ ++++
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLE 312
Query: 339 AEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYI 396
ED I P+ + +L ACA+ G L+ GR + + P + + I+++
Sbjct: 313 RED-GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHY---SCIVDLMC 368
Query: 397 RGGNISSARAVFDRMPVKDVIA-WTSMIEGFGSH 429
R G + A + ++MP+K + + W +++ G +H
Sbjct: 369 RAGRLDDALNLIEKMPMKPLASVWGALLNGCRTH 402
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 5/157 (3%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P + + W++ + +V G L F++M G+ D F+ A + + A A
Sbjct: 176 DEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALA 235
Query: 61 VYGKMTH-CVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
GK H V + ++ D++ ++D Y KC CI A VF + R+V SW ++I G
Sbjct: 236 -QGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGG 294
Query: 120 YISERHVSVACDLFNKMRVE--LEPNSVTLIVMLQAC 154
Y + + A ++ E ++P+SV L+ +L AC
Sbjct: 295 YAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAAC 331
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 240/500 (48%), Gaps = 47/500 (9%)
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
+ +L ++L+AC + G QIHG+ K+G+ D ++N ++ +Y G +F
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 203 SEINKRD---------------------------------VASWNILISFYSMVGDMMRV 229
+ KRD + SWN +IS Y+ D + +
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDI 239
Query: 230 AG-LINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLD 288
A L +M + SWN +I + K G + +G+ ++ + D V +++D
Sbjct: 240 ASKLFADMPEKDLISWNS-----MIDGYVKHGRIEDAKGLFDVMPR---RDVVTWATMID 291
Query: 289 FYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI 348
YAK G + + LF ++ + + +MM+G++QN MEA+ +F M+ E ++ +
Sbjct: 292 GYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDT 351
Query: 349 WRNL-LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
+ L A A LG L +H Y+++ F + G L ++++MY + G+I A V
Sbjct: 352 TLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY--LGGKL--GVALIDMYSKCGSIQHAMLV 407
Query: 408 FDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
F+ + K + W +MI G HG G A + ++P+ +TF+ +L+ACSHSGLV
Sbjct: 408 FEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLV 467
Query: 468 SEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLA 527
EG + M+ IEP L H+ CMVD+ R G ++ A ++I +M + P+ IW L
Sbjct: 468 KEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLT 527
Query: 528 ASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKK 587
A + GE A+ L+ N + LLSN+ AS G W +V +R M E+ ++K
Sbjct: 528 ACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKI 587
Query: 588 PGWSCIEVKGVSYGFLSGDI 607
PG S IE+ G + F I
Sbjct: 588 PGCSWIELDGRVHEFFVDSI 607
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 129/496 (26%), Positives = 228/496 (45%), Gaps = 52/496 (10%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E + WN I++H AL M + GV D F+ +V +A S R V G
Sbjct: 82 EVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACS--RLGFVKG 139
Query: 64 KMT-HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYIS 122
M H + GL DL+ N +I Y+KC C+G +R++FD M RD VS+ SMI GY+
Sbjct: 140 GMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVK 199
Query: 123 ERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTP-LNVGTQIHGYAVKSGVLMDWSV 181
+ A +LF+ M +E++ N ++ M+ ++ +++ +++ + L+ W
Sbjct: 200 CGLIVSARELFDLMPMEMK-NLISWNSMISGYAQTSDGVDIASKLFA-DMPEKDLISW-- 255
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
NS++ Y G E+ + LF + +RDV +W +I Y+ +G + L ++M +
Sbjct: 256 -NSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDV 314
Query: 242 HSWNI-------------------------------ETLTLVISAFAKCGNLSKGEGVHC 270
++N TL +V+ A A+ G LSK +H
Sbjct: 315 VAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHL 374
Query: 271 LVIKTGFS-DDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFME 329
+++ F L +L+D Y+KCG + ++ +F I KS AM+ G +G
Sbjct: 375 YIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGES 434
Query: 330 AIALFQQMQAEDLVIVPE--IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHM 387
A + +Q E L + P+ + +L+AC++ G +K G + + + +E L
Sbjct: 435 AFDML--LQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRR---KHKIEPRLQH 489
Query: 388 ETSILNMYIRGGNISSARAVFDRMPVK--DVIAWTSMIEGFGSHG-FGFEALKYFNLMME 444
++++ R G+I A+ + + MPV+ DVI W + + H F L +L+++
Sbjct: 490 YGCMVDILSRSGSIELAKNLIEEMPVEPNDVI-WRTFLTACSHHKEFETGELVAKHLILQ 548
Query: 445 HRMQPNSVTFLSLLSA 460
P+S LS + A
Sbjct: 549 AGYNPSSYVLLSNMYA 564
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/459 (24%), Positives = 215/459 (46%), Gaps = 55/459 (11%)
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
+E + + I +L +C S +N QIHG +K+G++ + ++ ++ +A +
Sbjct: 8 MECSISSTIHVLGSCKTSDDVN---QIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLAD 64
Query: 200 LL-----------FSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
FS D WN +I +S G R A L+ + G S + +
Sbjct: 65 FARCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSH-GKDPRQALLLLCLMLENGVSVDKFS 123
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLDISVQLFREIH 307
L+LV+ A ++ G + G +H + KTG +SD LQ L+ Y KCG L +S Q+F +
Sbjct: 124 LSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMP 183
Query: 308 FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG-----AL 362
+ ++ +M+ G+++ G + A LF M E ++ W +++ A A
Sbjct: 184 KRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLIS--WNSMISGYAQTSDGVDIAS 241
Query: 363 KL-----------------GRVVHGYL--MKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
KL G V HG + K LF+ ++ ++++ Y + G +
Sbjct: 242 KLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHH 301
Query: 404 ARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLM-MEHRMQPNSVTFLSLLSACS 462
A+ +FD+MP +DV+A+ SM+ G+ + + EAL+ F+ M E + P+ T + +L A +
Sbjct: 302 AKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIA 361
Query: 463 HSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI 521
G +S+ ++ Y ++ F + L ++D++ +CG ++ A+ ++ + +
Sbjct: 362 QLGRLSKAIDMHLYIVEKQFYLGGKLG--VALIDMYSKCGSIQHAM-LVFEGIENKSIDH 418
Query: 522 WGALLAASGVYGNKTLGEYTAQRLLELE-----PDNAGY 555
W A++ ++G LGE LL++E PD+ +
Sbjct: 419 WNAMIGGLAIHG---LGESAFDMLLQIERLSLKPDDITF 454
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 123/409 (30%), Positives = 200/409 (48%), Gaps = 38/409 (9%)
Query: 217 ISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG 276
+S Y+ G+ + L +M S + +L + + A G VH +K+
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 277 F-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQ 335
F S+ + +LLD Y KC + + +LF EI ++ + AM+S + G EA+ L++
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 336 QMQA-----------EDLVIVP-------EIWRNLLD---------------ACANLGAL 362
M + LV E +R +++ AC+ +GA
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSM 422
+L + +H Y +NL +E + +++ ++ Y R G+I + VFD M +DV+AW+S+
Sbjct: 199 RLIKEIHSYAFRNL----IEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSL 254
Query: 423 IEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
I + HG ALK F M ++ P+ + FL++L ACSH+GL E + M+ +G
Sbjct: 255 ISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYG 314
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTA 542
+ + DH++C+VD+ R G +EA +I M P ++ WGALL A YG L E A
Sbjct: 315 LRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAA 374
Query: 543 QRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
+ LL +EP+N + LL + S GR E E LR +M E +K PG S
Sbjct: 375 RELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 169/417 (40%), Gaps = 83/417 (19%)
Query: 15 IRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFP----VVNRALSSMRA--DAVYGKMTHC 68
+ ++ + G AL+ F +M H +F P V + AL S A V G H
Sbjct: 19 LSSYANQGNHEQALNLFLQM------HSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 69 VAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSV 128
+++ + + ++D Y KC + AR++FD + R+ V W +MI+ Y V
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 129 ACDLFNKMRV----------------------------------ELEPNSVTLIVMLQAC 154
A +L+ M V +PN +TL+ ++ AC
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 155 CASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWN 214
A + +IH YA ++ + +K+ ++ Y GS V+L+F + RDV +W+
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 215 ILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIK 274
LIS Y++ GD EM+ + +I L ++ + C +
Sbjct: 253 SLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKA----CSH------------- 295
Query: 275 TGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALF 334
G +D+ L Y K + D ++ ++ H+ + + + + G F EA +
Sbjct: 296 AGLADEAL------VYFKRMQGDYGLRASKD-HYSCLVDVLSRV------GRFEEAYKVI 342
Query: 335 QQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLM----KNLFNGPVEGNLHM 387
Q M + + W LL AC N G ++L + L+ +N N + G ++M
Sbjct: 343 QAMPEKP---TAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYM 396
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 131/288 (45%), Gaps = 50/288 (17%)
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAE-DLVIVPEIWRNLLDACANLGALKLGRVVHG 370
I+L +S + G+ +A+ LF QM + L + ++ L +CA LG VH
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 371 YLMK-NLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF--- 426
+ +K N + P G ++L+MY + ++S AR +FD +P ++ + W +MI +
Sbjct: 73 HSVKSNFLSNPFVG-----CALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127
Query: 427 ------------------------------GSHGFGFEALKYFNLMMEHRMQPNSVTFLS 456
G+ + A++++ M+E R +PN +T L+
Sbjct: 128 GKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLA 187
Query: 457 LLSACSHSG---LVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
L+SACS G L+ E +S + IEP + +V+ +GRCG + + ++
Sbjct: 188 LVSACSAIGAFRLIKE----IHSYAFRNLIEPHPQLKSGLVEAYGRCGSIV-YVQLVFDS 242
Query: 514 VILPDSRIWGALLAASGVYGN--KTLGEYTAQRLLELEPDNAGYHTLL 559
+ D W +L++A ++G+ L + L ++ PD+ + +L
Sbjct: 243 MEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVL 290
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/358 (20%), Positives = 146/358 (40%), Gaps = 41/358 (11%)
Query: 110 VVSWTSMIAGYISERHVSVACDLFNKMR--VELEPNSVTLIVMLQACCASTPLNVGTQIH 167
++S T ++ Y ++ + A +LF +M L ++ + L++C A+ +G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 168 GYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMM 227
++VKS L + V ++L MY S LF EI +R+ WN +IS Y+ G +
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 228 RVAGLINEMQSLEGHSW--------------------------------NIETLTLVISA 255
L M + S N+ TL ++SA
Sbjct: 132 EAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSA 191
Query: 256 FAKCGNLSKGEGVHCLVIKTGFSD-DVLQTSLLDFYAKCGKLDISVQL-FREIHFKSYIT 313
+ G + +H + L++ L++ Y +CG + + VQL F + + +
Sbjct: 192 CSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSI-VYVQLVFDSMEDRDVVA 250
Query: 314 LGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLM 373
+++S + +G A+ FQ+M+ + + N+L AC++ G V Y
Sbjct: 251 WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV---YFK 307
Query: 374 KNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVI-AWTSMIEGFGSHG 430
+ + + + + ++++ R G A V MP K W +++ ++G
Sbjct: 308 RMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYG 365
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 148/556 (26%), Positives = 259/556 (46%), Gaps = 38/556 (6%)
Query: 2 EEEPNNTM-AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
E+ P ++ WN + G + F+++ +MG +F V + +S ++ D
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVK-DL 231
Query: 61 VYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGY 120
K HC A + GLD ++ N++I Y KC A R+F D+VSW ++I
Sbjct: 232 DISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICAT 291
Query: 121 ISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
+ A LF M PN T + +L L+ G QIHG +K+G
Sbjct: 292 AKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGI 351
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFY---------SMVGDMMRV- 229
+ N+++ YA G+ E+ L F I +++ WN L+S Y S+ M+++
Sbjct: 352 VLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMG 411
Query: 230 -------------AGLINEMQSLE------GHSWNIETLTLVISAFAKCGNLSKGEGVHC 270
+ + E+Q L G+ N L+ ++ ++AK N + +
Sbjct: 412 FRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAK--NQLMNDALLL 469
Query: 271 LVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEA 330
L +G + V + Y++ G+ SV+L + ++ ++ ++ E
Sbjct: 470 LDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEV 529
Query: 331 IALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETS 390
I LF+ M ++ + ++L C+ L L LG +HG + K F+ + +
Sbjct: 530 IELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC---ADTFVCNV 586
Query: 391 ILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPN 450
+++MY + G+I S VF+ K++I WT++I G HG+G EAL+ F + +P+
Sbjct: 587 LIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPD 646
Query: 451 SVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSII 510
V+F+S+L+AC H G+V EG ++ MK +G+EP +DH+ C VDL R G +KEA +I
Sbjct: 647 RVSFISILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLI 705
Query: 511 LKMVILPDSRIWGALL 526
+M D+ +W L
Sbjct: 706 REMPFPADAPVWRTFL 721
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 196/418 (46%), Gaps = 16/418 (3%)
Query: 48 VVNRALSSMRADAVYG-KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLML 106
V +A S R A++ +T C + +Y CN +I Y K + A +VFD M
Sbjct: 21 VCRKAPSFARTKALHALSITLCSVLLQ----PVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 107 HRDVVSWTSMIAGYISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQ 165
R+ VS+ ++I GY V A +F++MR PN T+ +L CAS + GTQ
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS--CASLDVRAGTQ 134
Query: 166 IHGYAVKSGVLM-DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG 224
+HG ++K G+ M D V +L +Y E E +F ++ + + +WN ++S G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 225 DMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQ 283
+ E+ + G S + V+ + +L + +HC K G ++ +
Sbjct: 195 FLKECMFFFRELVRM-GASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVV 253
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
SL+ Y KCG ++ ++F++ ++ A++ ++ + ++A+ LF M
Sbjct: 254 NSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFS 313
Query: 344 IVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
+ ++L + + L GR +HG L+KN E + + ++++ Y + GN+
Sbjct: 314 PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKN----GCETGIVLGNALIDFYAKCGNLED 369
Query: 404 ARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
+R FD + K+++ W +++ G+ + G L F M++ +P TF + L +C
Sbjct: 370 SRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 101/220 (45%), Gaps = 10/220 (4%)
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
+++ Y K G++ ++ ++F ++ ++ ++ ++ G+ + G +A +F +M+ +
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 344 IVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
LL +CA+L ++ G +HG +K G + + T +L +Y R +
Sbjct: 113 PNQSTVSGLL-SCASLD-VRAGTQLHGLSLKY---GLFMADAFVGTCLLCLYGRLDLLEM 167
Query: 404 ARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS--AC 461
A VF+ MP K + W M+ G GF E + +F ++ +FL +L +C
Sbjct: 168 AEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSC 227
Query: 462 SHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCG 501
+S+ + K G++ + ++ +G+CG
Sbjct: 228 VKDLDISKQLHCSATKK---GLDCEISVVNSLISAYGKCG 264
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ 448
+I+++Y + G +S A VFD+MP ++ +++ ++I+G+ +G +A F+ M
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEAL 507
PN T LLS S V G +++ S+K+G + A TC++ L+GR +++ A
Sbjct: 113 PNQSTVSGLLSCASLD--VRAGTQLHGLSLKYGLFMADAF-VGTCLLCLYGRLDLLEMAE 169
Query: 508 SIILKM 513
+ M
Sbjct: 170 QVFEDM 175
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 190/345 (55%), Gaps = 3/345 (0%)
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREI 306
+L +VI A + + + G+ +H + ++ GF D+ ++ + Y K G+ + + ++F E
Sbjct: 119 SLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDEN 178
Query: 307 HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
+ + A++ G G EA+ +F M+ L ++ +C LG L L
Sbjct: 179 PERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAF 238
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGF 426
+H +++ + ++ M S+++MY + G + A +F+ M ++V++W+SMI G+
Sbjct: 239 QLHKCVLQA--KTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGY 296
Query: 427 GSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPA 486
++G EAL+ F M E ++PN +TF+ +LSAC H GLV EG + MK F +EP
Sbjct: 297 AANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPG 356
Query: 487 LDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLL 546
L H+ C+VDL R G +KEA ++ +M + P+ +WG L+ +G+ + E+ A ++
Sbjct: 357 LSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMV 416
Query: 547 ELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWS 591
ELEP N G + +L+NV A G W +VE +R+ M K + K P +S
Sbjct: 417 ELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKVAKIPAYS 461
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 156/318 (49%), Gaps = 9/318 (2%)
Query: 113 WTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAV 171
W +++ YI A ++ M R + P+ +L ++++A +G ++H AV
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 172 KSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAG 231
+ G + D ++ + +Y G E +F E +R + SWN +I + G
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF---SDDVLQTSLLD 288
+ +M+ G + T+ V ++ G+LS +H V++ SD ++ SL+D
Sbjct: 205 MFVDMKR-SGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 289 FYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI 348
Y KCG++D++ +F E+ ++ ++ +M+ G+ NG+ +EA+ F+QM+ +
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 349 WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
+ +L AC + G ++ G+ +MK+ F +E L I+++ R G + A+ V
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFA-MMKSEFE--LEPGLSHYGCIVDLLSRDGQLKEAKKVV 380
Query: 409 DRMPVK-DVIAWTSMIEG 425
+ MP+K +V+ W ++ G
Sbjct: 381 EEMPMKPNVMVWGCLMGG 398
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 146/319 (45%), Gaps = 14/319 (4%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA 70
WN +R+++ A+ + M + V D ++ P+V +A + D GK H VA
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIH-DFTLGKELHSVA 143
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVAC 130
+++G D + + I Y K AR+VFD R + SW ++I G + A
Sbjct: 144 VRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAV 203
Query: 131 DLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHG--YAVKSGVLMDWSVKNSVLR 187
++F M R LEP+ T++ + +C L++ Q+H K+ D + NS++
Sbjct: 204 EMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 188 MYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
MY G + +F E+ +R+V SW+ +I Y+ G+ + +M+ G N
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF-GVRPNKI 322
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLV-----IKTGFSDDVLQTSLLDFYAKCGKLDISVQL 302
T V+SA G + +G+ ++ ++ G S ++D ++ G+L + ++
Sbjct: 323 TFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSH---YGCIVDLLSRDGQLKEAKKV 379
Query: 303 FREIHFKSYITL-GAMMSG 320
E+ K + + G +M G
Sbjct: 380 VEEMPMKPNVMVWGCLMGG 398
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 9/265 (3%)
Query: 2 EEEPNNTM-AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P + +WN I G+ + A+ F M++ G+ D FT V + + +
Sbjct: 176 DENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLS 235
Query: 61 VYGKMTHCV-AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
+ ++ CV + D+ N++ID Y KC + A +F+ M R+VVSW+SMI G
Sbjct: 236 LAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVG 295
Query: 120 YISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
Y + + A + F +MR + PN +T + +L AC + G + + +KS ++
Sbjct: 296 YAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEG-KTYFAMMKSEFELE 354
Query: 179 WSVKN--SVLRMYADKGSTEEVELLFSEIN-KRDVASWNILISFYSMVGDMMRVAGLINE 235
+ + ++ + + G +E + + E+ K +V W L+ GD+ +
Sbjct: 355 PGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPY 414
Query: 236 MQSLEGHSWNIETLTLVISAFAKCG 260
M LE WN ++ + +A G
Sbjct: 415 MVELE--PWNDGVYVVLANVYALRG 437
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 145/496 (29%), Positives = 232/496 (46%), Gaps = 64/496 (12%)
Query: 142 PNSVTLIVMLQACCASTPLNV-GTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
P V LI L+AC P V G +H ++K GV D V +S++ MY G
Sbjct: 45 PGWVPLI--LRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARK 102
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+F E+ +R+VA+WN +I Y GD + +GL E+ N T +I + K
Sbjct: 103 VFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCR----NTVTWIEMIKGYGKRI 158
Query: 261 NLSKGEGVHCLVIKTGFSDDVLQ--TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMM 318
+ K L + F ++ + +L Y K++ + + F +I K+ MM
Sbjct: 159 EIEKARE---LFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMM 215
Query: 319 SGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL-------------------------- 352
SG+ + G EA A+F ++ A DLVI W L
Sbjct: 216 SGYFRIGDVHEARAIFYRVFARDLVI----WNTLIAGYAQNGYSDDAIDAFFNMQGEGYE 271
Query: 353 ---------LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
L ACA G L +GR VH + +E N + ++++MY + G++ +
Sbjct: 272 PDAVTVSSILSACAQSGRLDVGREVHSLINHR----GIELNQFVSNALIDMYAKCGDLEN 327
Query: 404 ARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSH 463
A +VF+ + V+ V SMI HG G EAL+ F+ M ++P+ +TF+++L+AC H
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVH 387
Query: 464 SGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWG 523
G + EG KI+ MK ++P + H C++ L GR G +KEA ++ +M + P+ + G
Sbjct: 388 GGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLG 446
Query: 524 ALLAASGVYGNKTLGEY------TAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRR 577
ALL A V+ + + E TA + +N + +SN+ A RW E LR
Sbjct: 447 ALLGACKVHMDTEMAEQVMKIIETAGSITNSYSEN--HLASISNLYAHTERWQTAEALRV 504
Query: 578 EMSEKDLKKKPGWSCI 593
EM ++ L+K PG S +
Sbjct: 505 EMEKRGLEKSPGLSSL 520
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/430 (26%), Positives = 193/430 (44%), Gaps = 38/430 (8%)
Query: 15 IRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMG 74
I+ H+ G AL + +R+ GV + P++ RA + + V GK+ H +I+ G
Sbjct: 18 IKNHISRGSPIQALVLYGGIRRRGVYFPGWV-PLILRACACVVPRVVLGKLLHSESIKFG 76
Query: 75 LDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFN 134
+ D+ +++I Y KC C+ AR+VFD M R+V +W +MI GY+S +A LF
Sbjct: 77 VCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFE 136
Query: 135 KMRVELEPNSVTLIVMLQACCASTPLNVGTQ-----------IHGYAVKSGVLM------ 177
++ V N+VT I M++ + + + ++V GV +
Sbjct: 137 EISV--CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKME 194
Query: 178 -------DWSVKNS-----VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGD 225
D KN+ ++ Y G E +F + RD+ WN LI+ Y+ G
Sbjct: 195 DARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGY 254
Query: 226 MMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQT 284
MQ EG+ + T++ ++SA A+ G L G VH L+ G + +
Sbjct: 255 SDDAIDAFFNMQG-EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSN 313
Query: 285 SLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVI 344
+L+D YAKCG L+ + +F I +S +M+S +G EA+ +F M++ DL
Sbjct: 314 ALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKP 373
Query: 345 VPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSA 404
+ +L AC + G L G + + V+ N+ ++++ R G + A
Sbjct: 374 DEITFIAVLTACVHGGFLMEGLKI----FSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEA 429
Query: 405 RAVFDRMPVK 414
+ M VK
Sbjct: 430 YRLVKEMHVK 439
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 245/540 (45%), Gaps = 62/540 (11%)
Query: 114 TSMIAGYISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKS 173
S I +++ R + L ++ + NS+T + Q+H + S
Sbjct: 4 ASSIRQFVTSRFIVPGTGLLKGFKLVEDSNSITHLF---------------QVHARLITS 48
Query: 174 GVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLI 233
G D S +L+ + G + ++ I K A N + Y + + G
Sbjct: 49 GNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCA--NPVFKAYLVSSSPKQALGFY 106
Query: 234 NEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVL--QTSLLDFYA 291
++ G + T +IS K + G+ H IK G D VL Q SL+ Y
Sbjct: 107 FDILRF-GFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG-CDQVLPVQNSLMHMYT 164
Query: 292 KCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV-------- 343
CG LD++ +LF EI + ++ ++++G ++NG + A LF +M ++++
Sbjct: 165 CCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISA 224
Query: 344 ------------IVPEIWRN-----------LLDACANLGALKLGRVVHGYLMKNLFNGP 380
+ E+ R LL+AC LK GR VH L++ N
Sbjct: 225 YLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSS 284
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFN 440
V ++T++++MY + + AR +FD + +++ + W MI HG L+ F
Sbjct: 285 VV----IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFE 340
Query: 441 LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRC 500
M+ ++P+ VTF+ +L C+ +GLVS+G Y M F I+P H CM +L+
Sbjct: 341 AMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSA 400
Query: 501 GM---VKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHT 557
G +EAL + + P+S W LL++S GN TLGE A+ L+E +P N Y+
Sbjct: 401 GFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYH 460
Query: 558 LLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYA 617
LL N+ + GRW +V +R + E+ + + PG +++K + +G G EAE+++
Sbjct: 461 LLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLG---CKEAEKVFT 517
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 128/285 (44%), Gaps = 46/285 (16%)
Query: 27 ALSTFKKMRQMGVPHDTFTF-PVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTM 85
AL + + + G D++TF +++ + D+ GKM H AI+ G D L N++
Sbjct: 102 ALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDS--GKMCHGQAIKHGCDQVLPVQNSL 159
Query: 86 IDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM--------- 136
+ Y C + A+++F + RD+VSW S+IAG + V A LF++M
Sbjct: 160 MHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWN 219
Query: 137 -----------------------RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKS 173
R + N TL+++L AC S L G +H +++
Sbjct: 220 IMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRT 279
Query: 174 GVLMDWSVKNSVLRMYADKGSTEEVEL---LFSEINKRDVASWNILISFYSMVGDMMRVA 230
+ + +++ MY G +EV L +F ++ R+ +WN++I + + G R
Sbjct: 280 FLNSSVVIDTALIDMY---GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHG---RPE 333
Query: 231 GLINEMQSLEGHSWNIETLTL--VISAFAKCGNLSKGEGVHCLVI 273
G + +++ + +T V+ A+ G +S+G+ + L++
Sbjct: 334 GGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMV 378
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 99/236 (41%), Gaps = 16/236 (6%)
Query: 1 MEEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRAD 59
+E P+ N ++WN+ I ++ ++S F++M + G + T ++ A A
Sbjct: 207 FDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR-SAR 265
Query: 60 AVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
G+ H I+ L+ + +ID Y KC +G ARR+FD + R+ V+W MI
Sbjct: 266 LKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILA 325
Query: 120 YISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHG-----YAVKS 173
+ +LF M L P+ VT + +L C + ++ G + + +K
Sbjct: 326 HCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKP 385
Query: 174 GVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDV----ASWNILISFYSMVGD 225
W + N +Y+ G EE E + DV W L+S G+
Sbjct: 386 NFGHQWCMAN----LYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGN 437
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 146/518 (28%), Positives = 248/518 (47%), Gaps = 27/518 (5%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG----KMTHCVAIQMGLDL 77
F S S FK +F V+ AL + + G K H +A++ D
Sbjct: 56 ASFDSGFSGFKGENVNQDDSSSFDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQ 115
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFN--- 134
+YF N +I V+ + AR+VFD M ++ V+WT+MI GY+ A LF
Sbjct: 116 VIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYV 175
Query: 135 KMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGS 194
K + N + +L C +G Q+HG VK GV + V++S++ YA G
Sbjct: 176 KHGIRF-TNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGE 233
Query: 195 TEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVIS 254
F + ++DV SW +IS S G ++ G+ M + W + V S
Sbjct: 234 LTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGML----NHWFLPNEFTVCS 289
Query: 255 AFAKCGN---LSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFKS 310
C L G VH LV+K DV + TSL+D YAKCG++ ++F + ++
Sbjct: 290 ILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN 349
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHG 370
+T ++++ + G EAI+LF+ M+ L+ ++L AC ++GAL LG+ +H
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 371 YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHG 430
++KN +E N+++ ++++ +Y + G A V ++P +DV++WT+MI G S G
Sbjct: 410 QIIKN----SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLG 465
Query: 431 FGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH 490
EAL + M++ ++PN T+ S L AC++S + G I+ K +
Sbjct: 466 HESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVF-VG 524
Query: 491 TCMVDLFGRCGMVKEALSIILKMVILPDSRI--WGALL 526
+ ++ ++ +CG V EA + M P+ + W A++
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDSM---PEKNLVSWKAMI 559
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 222/458 (48%), Gaps = 8/458 (1%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
NT+ W I ++ G A + F+ + G+ V L S RA+ G+
Sbjct: 146 KNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQ 205
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
H +++G+ +L ++++ FY +C + A R FD+M +DV+SWT++I+ + H
Sbjct: 206 VHGNMVKVGVG-NLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGH 264
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A +F M PN T+ +L+AC L G Q+H VK + D V S
Sbjct: 265 GIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTS 324
Query: 185 VLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW 244
++ MYA G + +F ++ R+ +W +I+ ++ G L M+ +
Sbjct: 325 LMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIAN 384
Query: 245 NIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLF 303
N+ T+ ++ A G L G+ +H +IK +V + ++L+ Y KCG+ + +
Sbjct: 385 NL-TVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVL 443
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
+++ + ++ AM+SG G EA+ ++M E + P + + L ACAN +L
Sbjct: 444 QQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLL 503
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMI 423
+GR +H KN N+ + +++++MY + G +S A VFD MP K++++W +MI
Sbjct: 504 IGRSIHSIAKKN----HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMI 559
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
G+ +GF EALK M + + F ++LS C
Sbjct: 560 MGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 176/358 (49%), Gaps = 4/358 (1%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
E + ++W I G A+ F M + FT + +A S +A +G
Sbjct: 245 EEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA-LRFG 303
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
+ H + ++ + D++ +++D Y KC I R+VFD M +R+ V+WTS+IA + E
Sbjct: 304 RQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHARE 363
Query: 124 RHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
A LF M R L N++T++ +L+AC + L +G ++H +K+ + + +
Sbjct: 364 GFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIG 423
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
++++ +Y G + + + ++ RDV SW +IS S +G + EM EG
Sbjct: 424 STLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ-EGV 482
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT-GFSDDVLQTSLLDFYAKCGKLDISVQ 301
N T + + A A +L G +H + K S+ + ++L+ YAKCG + + +
Sbjct: 483 EPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFR 542
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANL 359
+F + K+ ++ AM+ G+ +NG EA+ L +M+AE + I+ +L C ++
Sbjct: 543 VFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 136/269 (50%), Gaps = 11/269 (4%)
Query: 268 VHCLVIKTGFSDDVLQ--TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNG 325
+H + +K F D V+ +L+ + G L + ++F + K+ +T AM+ G+++ G
Sbjct: 104 IHAMALKC-FDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYG 162
Query: 326 SFMEAIALFQQMQAEDLVIVPE-IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGN 384
EA ALF+ + E ++ LL+ C+ +LGR VHG ++K GN
Sbjct: 163 LEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVK-----VGVGN 217
Query: 385 LHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMME 444
L +E+S++ Y + G ++SA FD M KDVI+WT++I G G +A+ F M+
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 445 HRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVK 504
H PN T S+L ACS + G ++ +S+ I+ + T ++D++ +CG +
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGEIS 336
Query: 505 EALSIILKMVILPDSRIWGALLAASGVYG 533
+ + M ++ W +++AA G
Sbjct: 337 DCRKVFDGMSN-RNTVTWTSIIAAHAREG 364
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 228/450 (50%), Gaps = 36/450 (8%)
Query: 165 QIHGYAVKSGVLM--DWSVK---NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISF 219
QIH + S L+ W K N+++R Y G + LF+ + V N+ +F
Sbjct: 32 QIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNL--TF 89
Query: 220 YSMV----GDMMRVAGLINEMQSLE-GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIK 274
S++ G+ Q+L+ G W+ T + + + G+L +
Sbjct: 90 PSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMF----- 144
Query: 275 TGFSDDVLQ------TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFM 328
DD+L SLLD + G++D + + F+ + ++ +++GF + G
Sbjct: 145 ----DDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHA 200
Query: 329 EAIALFQQM-QAEDLVIVPE--IWRNLLDACANL--GALKLGRVVHGYLMKNLFNGPVEG 383
+A+ +F +M Q E VI P + ++L +CAN G ++LG+ +HGY+M +
Sbjct: 201 KALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSK----EIIL 256
Query: 384 NLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMM 443
+ T++L+MY + G++ A +FD++ K V AW ++I S+G +AL+ F +M
Sbjct: 257 TTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMK 316
Query: 444 EHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMV 503
+ PN +T L++L+AC+ S LV G +++ S+ + I P +H+ C+VDL GR G++
Sbjct: 317 SSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLL 376
Query: 504 KEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVK 563
+A + I + PD+ + GALL A ++ N LG ++L+ L+P + G + LS
Sbjct: 377 VDAANFIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFN 436
Query: 564 ASAGRWNEVEELRREMSEKDLKKKPGWSCI 593
A W+E E++R+ M E ++K P +S +
Sbjct: 437 ALDSNWSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 41/286 (14%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFP-VVNRALSSMRADAVYGKMTHCV 69
+N IR+++ G++ ++L+ F M V + TFP ++ A SS YG H
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVS--YGVALHGQ 111
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLH---------------------- 107
A++ G D + + + FY + + +R++FD +L+
Sbjct: 112 ALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYA 171
Query: 108 ---------RDVVSWTSMIAGYISERHVSVACDLFNKM----RVELEPNSVTLIVMLQAC 154
DVVSWT++I G+ + + A +F +M R + PN T + +L +C
Sbjct: 172 FEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC 231
Query: 155 CA--STPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVAS 212
+ +G QIHGY + +++ ++ ++L MY G E +F +I + V +
Sbjct: 232 ANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCA 291
Query: 213 WNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAK 258
WN +IS + G + + M+S H I TL +++A A+
Sbjct: 292 WNAIISALASNGRPKQALEMFEMMKSSYVHPNGI-TLLAILTACAR 336
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 122/291 (41%), Gaps = 39/291 (13%)
Query: 113 WTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAV 171
+ ++I Y++ + LF M ++PN++T +++A C+S ++ G +HG A+
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 172 KSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI-------------------------- 205
K G L D V+ S +R Y + G E +F +I
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 206 -----NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
DV SW +I+ +S G + + EM E T V S + C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFV-SVLSSCA 232
Query: 261 NLSK-----GEGVHCLVI-KTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITL 314
N + G+ +H V+ K L T+LLD Y K G L++++ +F +I K
Sbjct: 233 NFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAW 292
Query: 315 GAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
A++S NG +A+ +F+ M++ + +L ACA + LG
Sbjct: 293 NAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLG 343
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 214/426 (50%), Gaps = 37/426 (8%)
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+FS I +V +N +I YS+VG + + M+S G + T ++ + +
Sbjct: 58 VFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKS-RGIWADEYTYAPLLKSCSSLS 116
Query: 261 NLSKGEGVHCLVIKTGFSD-DVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMS 319
+L G+ VH +I+TGF ++ +++ Y G++ + ++F E+ ++ + M+
Sbjct: 117 DLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIR 176
Query: 320 GFIQNGSFMEAIALFQQMQAEDLVI----------------VPEIWRNLLDA-------- 355
GF +G + LF+QM +V E++ ++D
Sbjct: 177 GFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEAT 236
Query: 356 -------CANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVF 408
A+LG L G+ +H + G + + + ++++ Y + G++ +A A+F
Sbjct: 237 VVTVLPISASLGVLDTGKWIHSTAESS---GLFKDFITVGNALVDFYCKSGDLEAATAIF 293
Query: 409 DRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH-RMQPNSVTFLSLLSACSHSGLV 467
+M ++V++W ++I G +G G + F+ M+E ++ PN TFL +L+ CS++G V
Sbjct: 294 RKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQV 353
Query: 468 SEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLA 527
G +++ M F +E +H+ MVDL R G + EA + M + ++ +WG+LL+
Sbjct: 354 ERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLS 413
Query: 528 ASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKK 587
A +G+ L E A L+++EP N+G + LLSN+ A GRW +VE++R M + L+K
Sbjct: 414 ACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKS 473
Query: 588 PGWSCI 593
G S I
Sbjct: 474 TGQSTI 479
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 161/373 (43%), Gaps = 48/373 (12%)
Query: 98 ARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCA 156
A RVF + + +V+ + +MI Y + F+ M+ + + T +L++C +
Sbjct: 55 ANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSS 114
Query: 157 STPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNIL 216
+ L G +HG +++G ++ V+ +Y G + + +F E+++R+V WN++
Sbjct: 115 LSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLM 174
Query: 217 ISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG 276
I + GD+ R L +M SWN +IS+ +KCG + + C +I G
Sbjct: 175 IRGFCDSGDVERGLHLFKQMSERSIVSWNS-----MISSLSKCGRDREALELFCEMIDQG 229
Query: 277 FSDD---------------VLQT----------------------SLLDFYAKCGKLDIS 299
F D VL T +L+DFY K G L+ +
Sbjct: 230 FDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAA 289
Query: 300 VQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE-IWRNLLDACAN 358
+FR++ ++ ++ ++SG NG I LF M E V E + +L C+
Sbjct: 290 TAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSY 349
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVI 417
G ++ G + G +M+ +E +++++ R G I+ A MPV +
Sbjct: 350 TGQVERGEELFGLMMERF---KLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAA 406
Query: 418 AWTSMIEGFGSHG 430
W S++ SHG
Sbjct: 407 MWGSLLSACRSHG 419
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 163/401 (40%), Gaps = 66/401 (16%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N + +N I+ + +G +LS F M+ G+ D +T+ + ++ SS+ +D +GK
Sbjct: 66 NVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSL-SDLRFGKCV 124
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H I+ G +++ Y +G A++VFD M R+VV W MI G+ V
Sbjct: 125 HGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDV 184
Query: 127 SVACDLFNKM---------------------RVELE-----------PNSVTLIVMLQAC 154
LF +M R LE P+ T++ +L
Sbjct: 185 ERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPIS 244
Query: 155 CASTPLNVGTQIHGYAVKSGVLMDW-SVKNSVLRMYADKGSTEEVELLFSEINKRDVASW 213
+ L+ G IH A SG+ D+ +V N+++ Y G E +F ++ +R+V SW
Sbjct: 245 ASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSW 304
Query: 214 NILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVI 273
N LIS ++ G L + M + N T V++ + G + +GE + L++
Sbjct: 305 NTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMM 364
Query: 274 KTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIAL 333
+ KL+ + + GAM+ ++G EA
Sbjct: 365 ER------------------FKLEARTEHY-----------GAMVDLMSRSGRITEAFKF 395
Query: 334 FQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMK 374
+ M +W +LL AC + G +KL V L+K
Sbjct: 396 LKNMPVN---ANAAMWGSLLSACRSHGDVKLAEVAAMELVK 433
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 31/283 (10%)
Query: 286 LLDFYAKCGKL---DISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDL 342
L F + CG L D + ++F I + + AM+ + G +E+++ F M++ +
Sbjct: 39 LAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGI 98
Query: 343 VIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFN--GPVE-GNLHMETS--------- 390
+ LL +C++L L+ G+ VHG L++ F+ G + G + + TS
Sbjct: 99 WADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQK 158
Query: 391 -----------ILNMYIRG----GNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEA 435
+ N+ IRG G++ +F +M + +++W SMI G EA
Sbjct: 159 VFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREA 218
Query: 436 LKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVD 495
L+ F M++ P+ T +++L + G++ G I+ + + + + +VD
Sbjct: 219 LELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVD 278
Query: 496 LFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLG 538
+ + G ++ A +I KM + W L++ S V G G
Sbjct: 279 FYCKSGDLEAATAIFRKMQ-RRNVVSWNTLISGSAVNGKGEFG 320
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 120/286 (41%), Gaps = 10/286 (3%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHC 68
++WN I + G+ AL F +M G D T V +S+ GK H
Sbjct: 200 VSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTV-LPISASLGVLDTGKWIHS 258
Query: 69 VAIQMGLDLD-LYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVS 127
A GL D + N ++DFY K + A +F M R+VVSW ++I+G
Sbjct: 259 TAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGE 318
Query: 128 VACDLFNKMRVE--LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK-NS 184
DLF+ M E + PN T + +L C + + G ++ G ++ L + +
Sbjct: 319 FGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGA 378
Query: 185 VLRMYADKGS-TEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE-GH 242
++ + + G TE + L + + A W L+S GD+ E+ +E G+
Sbjct: 379 MVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGN 438
Query: 243 SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLD 288
S N L+ + +A+ G E V L+ K Q+++ D
Sbjct: 439 SGN---YVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTICD 481
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/468 (27%), Positives = 228/468 (48%), Gaps = 54/468 (11%)
Query: 201 LFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE-----GHSWNIETLTLVISA 255
+F EI + DV IS +++G ++ + + Q+ + G N T VI +
Sbjct: 49 VFDEIPELDV------ISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 256 FAKCGNLSKGEGVHCLVIKTGFSDDVLQ-------------------------------- 283
++ G+ +HC +K G + +V
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
T+L+ Y K + + ++ LFR + +S +T A++ GF Q G EA+ F M E +V
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 344 IVPE-IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNIS 402
I E + + A +N+ + G+ +H +K F G N+ + S+++ Y + GN+
Sbjct: 223 IPNESTFPCAITAISNIASHGAGKSIHACAIK--FLGK-RFNVFVWNSLISFYSKCGNME 279
Query: 403 SARAVFDRMP--VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH-RMQPNSVTFLSLLS 459
+ F+++ +++++W SMI G+ +G G EA+ F M++ ++PN+VT L +L
Sbjct: 280 DSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLF 339
Query: 460 ACSHSGLVSEGCKIYYSMKWGFGIEP---ALDHHTCMVDLFGRCGMVKEALSIILKMVIL 516
AC+H+GL+ EG +Y++ +P L+H+ CMVD+ R G KEA +I M +
Sbjct: 340 ACNHAGLIQEG-YMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLD 398
Query: 517 PDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELR 576
P W ALL ++ NK L + A ++LEL+P + + +LSN ++ W V +R
Sbjct: 399 PGIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIR 458
Query: 577 REMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAALCTLSR 624
R+M E LK+ G S IEV+ F++ D + +E+Y L +S+
Sbjct: 459 RKMKETGLKRFTGCSWIEVRDQIRVFVNADKNNELKDEVYRMLALVSQ 506
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 166/386 (43%), Gaps = 65/386 (16%)
Query: 95 IGCARRVFDLMLHRDVVSWTSMIAGYISE-RHVSVACDLFNKMRVELEPNSVTLIVMLQA 153
I A +VFD + DV+S T++I ++ E RHV + + + + PN T ++ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 154 CCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYA----------------------- 190
S + +G Q+H YA+K G+ + V ++VL Y
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSI 162
Query: 191 --------DKGSTEEVELLFSEINKRDVASWNILISFYSMVG----------DMMRVAGL 232
K EE LF + +R V +WN +I +S G DM+R +
Sbjct: 163 TNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVV 222
Query: 233 INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIK-TGFSDDV-LQTSLLDFY 290
I N T I+A + + G+ +H IK G +V + SL+ FY
Sbjct: 223 IP----------NESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFY 272
Query: 291 AKCGKLDISVQLFREI--HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE- 347
+KCG ++ S+ F ++ ++ ++ +M+ G+ NG EA+A+F++M +D + P
Sbjct: 273 SKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM-VKDTNLRPNN 331
Query: 348 -IWRNLLDACANLGALKLGRVVHGYLMK--NLFNGPVEGNLHMETSILNMYIRGGNISSA 404
+L AC + G ++ G + Y K N ++ P L +++M R G A
Sbjct: 332 VTILGVLFACNHAGLIQEG---YMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEA 388
Query: 405 RAVFDRMPVKDVIA-WTSMIEGFGSH 429
+ MP+ I W +++ G H
Sbjct: 389 EELIKSMPLDPGIGFWKALLGGCQIH 414
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 115/246 (46%), Gaps = 37/246 (15%)
Query: 27 ALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNTMI 86
A FK++ +G+ + FTF V + ++ R D GK HC A++MGL +++ + ++
Sbjct: 77 ASQAFKRLLCLGIRPNEFTFGTVIGSSTTSR-DVKLGKQLHCYALKMGLASNVFVGSAVL 135
Query: 87 DFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM--RVELEPNS 144
+ YVK + ARR FD +VVS T++I+GY+ + A LF M R + N+
Sbjct: 136 NCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNA 195
Query: 145 V---------------TLIVMLQA----------CCASTPLN------VGTQIHGYAVKS 173
V T + ML+ CA T ++ G IH A+K
Sbjct: 196 VIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKF 255
Query: 174 -GVLMDWSVKNSVLRMYADKGSTEEVELLFSEI--NKRDVASWNILISFYSMVGDMMRVA 230
G + V NS++ Y+ G+ E+ L F+++ +R++ SWN +I Y+ G
Sbjct: 256 LGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAV 315
Query: 231 GLINEM 236
+ +M
Sbjct: 316 AMFEKM 321
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 80/153 (52%), Gaps = 9/153 (5%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGV--PHDTFTFPVVNRALSSMRADAVYGKMT 66
+ WN I G+ A++TF M + GV P+++ TFP A+S++ + GK
Sbjct: 191 VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNES-TFPCAITAISNIASHGA-GKSI 248
Query: 67 HCVAIQ-MGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLM--LHRDVVSWTSMIAGYISE 123
H AI+ +G +++ N++I FY KC + + F+ + R++VSW SMI GY
Sbjct: 249 HACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHN 308
Query: 124 RHVSVACDLFNKM--RVELEPNSVTLIVMLQAC 154
A +F KM L PN+VT++ +L AC
Sbjct: 309 GRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/355 (20%), Positives = 142/355 (40%), Gaps = 83/355 (23%)
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDACAN 358
++F EI I+ A++ F++ +EA F+++ L I P + ++ +
Sbjct: 48 KVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLC--LGIRPNEFTFGTVIGSSTT 105
Query: 359 LGALKLGRVVHGYLMK-----NLFNGPVEGNLHME----------------------TSI 391
+KLG+ +H Y +K N+F G N +++ T++
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 392 LNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYF-NLMMEHRMQPN 450
++ Y++ A ++F MP + V+ W ++I GF G EA+ F +++ E + PN
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 451 SVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSII 510
TF ++A S+ G I+ G + ++ + +CG ++++L
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAF 285
Query: 511 LKM------VILPDSRIWG----------------------------------------A 524
K+ ++ +S IWG
Sbjct: 286 NKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAG 345
Query: 525 LLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREM 579
L+ +Y NK + +Y LLELE ++ + ++ + +GR+ E EEL + M
Sbjct: 346 LIQEGYMYFNKAVNDYDDPNLLELE-----HYACMVDMLSRSGRFKEAEELIKSM 395
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 233/480 (48%), Gaps = 42/480 (8%)
Query: 25 HSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCNT 84
+ L +++ + G+ D F+FPVV +++ +G + + ++G D Y N
Sbjct: 88 NDVLRLYEQRSRCGIMPDAFSFPVV------IKSAGRFGILFQALVEKLGFFKDPYVRNV 141
Query: 85 MIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELEPNS 144
++D YVK + AR+VFD + R W MI+GY + AC LF+ M E +
Sbjct: 142 IMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMP---ENDV 198
Query: 145 VTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSE 204
V+ VM+ L + + V+ W N++L YA G TE+ LF++
Sbjct: 199 VSWTVMITGFAKVKDLENARKYFDRMPEKSVV-SW---NAMLSGYAQNGFTEDALRLFND 254
Query: 205 INKRDV----ASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCG 260
+ + V +W I+IS S D L+ + + N T ++ AKC
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDE-KRVRLNCFVKTALLDMHAKCR 313
Query: 261 NLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMS 319
++ + + G +++ +++ Y + G + + QLF + ++ ++ ++++
Sbjct: 314 DIQSARRIFN---ELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIA 370
Query: 320 GFIQNGSFMEAIALFQQM------QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLM 373
G+ NG AI F+ M + +++ ++ ++L AC ++ L+LG + Y+
Sbjct: 371 GYAHNGQAALAIEFFEDMIDYGDSKPDEVTMI-----SVLSACGHMADLELGDCIVDYIR 425
Query: 374 KNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGF 433
KN ++ N S++ MY RGGN+ A+ VFD M +DV+++ ++ F ++G G
Sbjct: 426 KN----QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGV 481
Query: 434 EALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCM 493
E L + M + ++P+ VT+ S+L+AC+ +GL+ EG +I+ S++ P DH+ CM
Sbjct: 482 ETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM 536
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 193/388 (49%), Gaps = 39/388 (10%)
Query: 165 QIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG 224
QIH +K + D + ++ + + G T+ L+F+++ +WN++I S V
Sbjct: 38 QIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLS-VN 96
Query: 225 DMMRVAGLINEMQSLEGHS-WNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVL- 282
R A L+ + + S ++ T VI A ++ G VH L IK GF +DV
Sbjct: 97 HKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFF 156
Query: 283 QTSLLDFYAKCGK-------------------------------LDISVQLFREIHFKSY 311
Q +L+D Y KCGK LD + +F ++ ++
Sbjct: 157 QNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV 216
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
++ AM++ +++N EA LF++MQ +D+ NLL A LG+L +GR VH Y
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 372 LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGF 431
KN F + + T++++MY + G++ AR VFD M K + W SMI G HG
Sbjct: 277 AHKNGF----VLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGC 332
Query: 432 GFEALKYFNLMMEH-RMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH 490
G EAL F M E ++P+++TF+ +LSAC+++G V +G + + M +GI P +H+
Sbjct: 333 GEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHN 392
Query: 491 TCMVDLFGRCGMVKEALSIILKMVILPD 518
CM+ L + V++A +++ M PD
Sbjct: 393 ACMIQLLEQALEVEKASNLVESMDSDPD 420
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 138/298 (46%), Gaps = 46/298 (15%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPH----DTFTFPVVNRAL---SSMRAD 59
+T WNL IR+ L H M + H D FTFP V +A SS+R
Sbjct: 82 STFTWNLMIRS---LSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIR-- 136
Query: 60 AVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFD-----------LMLH- 107
G H +AI+ G D++F NT++D Y KC R+VFD ML+
Sbjct: 137 --LGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYG 194
Query: 108 -------------------RDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTL 147
R+VVSWT+MI Y+ R A LF +M+V+ ++PN T+
Sbjct: 195 LVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTI 254
Query: 148 IVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINK 207
+ +LQA L++G +H YA K+G ++D + +++ MY+ GS ++ +F +
Sbjct: 255 VNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQG 314
Query: 208 RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG 265
+ +A+WN +I+ + G L EM+ + T V+SA A GN+ G
Sbjct: 315 KSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDG 372
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 144/314 (45%), Gaps = 51/314 (16%)
Query: 259 CGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAM 317
C N S+ + +H +IK ++D +L L+ + G+ + +F ++ S T M
Sbjct: 30 CSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLM 89
Query: 318 MSGFIQNGSFMEAIALFQQM----QAE-DLVIVPEIWRNLLDACANLGALKLGRVVHGYL 372
+ N EA+ LF M Q++ D P + + AC +++LG VHG
Sbjct: 90 IRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFV----IKACLASSSIRLGTQVHGLA 145
Query: 373 MK-NLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR--------------------- 410
+K FN ++ + +++++Y + G S R VFD+
Sbjct: 146 IKAGFFN-----DVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 411 ----------MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSA 460
MP+++V++WT+MI + + EA + F M ++PN T ++LL A
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 461 CSHSGLVSEGCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDS 519
+ G +S G ++ Y+ K GF ++ L T ++D++ +CG +++A + ++
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLG--TALIDMYSKCGSLQDARK-VFDVMQGKSL 317
Query: 520 RIWGALLAASGVYG 533
W +++ + GV+G
Sbjct: 318 ATWNSMITSLGVHG 331
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 184/381 (48%), Gaps = 44/381 (11%)
Query: 216 LISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT 275
L+ Y + G+M+ + +EM +WN+ +I+ G+ K C + K
Sbjct: 164 LVGMYLVGGNMIDAHKVFDEMPERNPVTWNV-----MITGLTNLGDFEKAL---CFLEKM 215
Query: 276 GFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQ 335
V T+++D YA+ K ++ LF S M A +
Sbjct: 216 PNRTVVSWTTIIDGYARVDKPKEAILLF----------------------SRMVACDAIK 253
Query: 336 QMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMY 395
+ L I+P +W NLG LK+ VH Y+ K G V ++ + S+++ Y
Sbjct: 254 PNEITILAILPAVW--------NLGDLKMCGSVHAYVGK---RGFVPCDIRVTNSLIDAY 302
Query: 396 IRGGNISSARAVFDRMP--VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
+ G I SA F +P K++++WT+MI F HG G EA+ F M ++PN VT
Sbjct: 303 AKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVT 362
Query: 454 FLSLLSACSHSGLVSEG-CKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILK 512
+S+L+ACSH GL E + + +M + I P + H+ C+VD+ R G ++EA I L+
Sbjct: 363 MISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALE 422
Query: 513 MVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEV 572
+ I + +W LL A VY + L E ++L+ELE + G + L+SN+ GR+ +
Sbjct: 423 IPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDA 482
Query: 573 EELRREMSEKDLKKKPGWSCI 593
+ R++M + + K PG S +
Sbjct: 483 QRFRKQMDVRGVAKLPGHSQV 503
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 11/225 (4%)
Query: 105 MLHRDVVSWTSMIAGYISERHVSVACDLFNKMRV--ELEPNSVTLIVMLQACCASTPLNV 162
M +R VVSWT++I GY A LF++M ++PN +T++ +L A L +
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 163 GTQIHGYAVKSG-VLMDWSVKNSVLRMYADKGSTEEVELLFSEI--NKRDVASWNILISF 219
+H Y K G V D V NS++ YA G + F EI ++++ SW +IS
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 220 YSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGV---HCLVIKTG 276
+++ G + +M+ L G N T+ V++A + G L++ E + + +V +
Sbjct: 335 FAIHGMGKEAVSMFKDMERL-GLKPNRVTMISVLNACSH-GGLAEEEFLEFFNTMVNEYK 392
Query: 277 FSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSG 320
+ DV L+D + G+L+ + ++ EI + + M+ G
Sbjct: 393 ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLG 437
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 7/236 (2%)
Query: 193 GSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLV 252
G E+ ++ R V SW +I Y+ V L + M + + N T+ +
Sbjct: 203 GDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAI 262
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGF--SDDVLQTSLLDFYAKCGKLDISVQLFREIH--F 308
+ A G+L VH V K GF D + SL+D YAKCG + + + F EI
Sbjct: 263 LPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGR 322
Query: 309 KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVV 368
K+ ++ M+S F +G EA+++F+ M+ L ++L+AC++ G + +
Sbjct: 323 KNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLE 382
Query: 369 HGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD-VIAWTSMI 423
M N + + ++ +++M R G + A + +P+++ + W ++
Sbjct: 383 FFNTMVNEYK--ITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLL 436
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 107/281 (38%), Gaps = 46/281 (16%)
Query: 2 EEEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAV 61
E N + WN+ I +LG F AL +KM V T R A +
Sbjct: 183 EMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILL 242
Query: 62 YGKMTHCVAIQMG--------------------------------LDLDLYFCNTMIDFY 89
+ +M C AI+ + D+ N++ID Y
Sbjct: 243 FSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAY 302
Query: 90 VKCWCIGCARRVFDLMLH--RDVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVT 146
KC CI A + F + + +++VSWT+MI+ + A +F M R+ L+PN VT
Sbjct: 303 AKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVT 362
Query: 147 LIVMLQACCASTPLN------VGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
+I +L AC T ++ Y + D ++ M KG EE E
Sbjct: 363 MISVLNACSHGGLAEEEFLEFFNTMVNEYKITP----DVKHYGCLVDMLRRKGRLEEAEK 418
Query: 201 LFSEINKRDVA-SWNILISFYSMVGDMMRVAGLINEMQSLE 240
+ EI + A W +L+ S+ D + ++ LE
Sbjct: 419 IALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELE 459
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 97/209 (46%), Gaps = 43/209 (20%)
Query: 382 EGNLHMETSILNMYIRGGNISSARAVFDRMPVKD-------------------------- 415
E +++++T+++ MY+ GGN+ A VFD MP ++
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEK 214
Query: 416 -----VIAWTSMIEGFGSHGFGFEALKYFNLMME-HRMQPNSVTFLSLLSACSHSGLVSE 469
V++WT++I+G+ EA+ F+ M+ ++PN +T L++L A + G +
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 470 GCKIY-YSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRI----WGA 524
++ Y K GF + + ++D + +CG ++ A ++ +P+ R W
Sbjct: 275 CGSVHAYVGKRGF-VPCDIRVTNSLIDAYAKCGCIQSAFKFFIE---IPNGRKNLVSWTT 330
Query: 525 LLAASGVY--GNKTLGEYTAQRLLELEPD 551
+++A ++ G + + + L L+P+
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPN 359
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 159 bits (403), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 134/567 (23%), Positives = 247/567 (43%), Gaps = 84/567 (14%)
Query: 56 MRADAVYGKMTHCVAI-----QMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDV 110
+R YG ++ C + + G + N+++ FY + A +VFD M DV
Sbjct: 62 LRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDV 121
Query: 111 VSWTSMIAGYI-SERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGY 169
+SW S+++GY+ S R C R ++ PN + L AC +G IH
Sbjct: 122 ISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSK 181
Query: 170 AVKSGVLM-DWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMR 228
VK G+ + V N ++ MY G ++ L+F + ++D SWN +++ S G +
Sbjct: 182 LVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLEL 241
Query: 229 VAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLD 288
++M + D V L+D
Sbjct: 242 GLWFFHQMPN---------------------------------------PDTVTYNELID 262
Query: 289 FYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDL------ 342
+ K G + + Q+ ++ + + +++G++ + EA F +M + +
Sbjct: 263 AFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYS 322
Query: 343 ---------VIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILN 393
+ W +L+ ACA+ KLG ++ + + +++++
Sbjct: 323 LSIVLAAVAALAVVPWGSLIHACAH----KLG---------------LDSRVVVASALID 363
Query: 394 MYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHR-MQPNSV 452
MY + G + A +F MP K++I W MI G+ +G EA+K FN + + R ++P+
Sbjct: 364 MYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRF 423
Query: 453 TFLSLLSACSHSGLVSEGCKIYYSMKWG-FGIEPALDHHTCMVDLFGRCGMVKEALSIIL 511
TFL+LL+ CSH + E Y+ M + I+P+++H ++ G+ G V +A +I
Sbjct: 424 TFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQ 483
Query: 512 KMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLEL-EPDNAGY-HTLLSNVKASAGRW 569
+ D W ALL A + + A +++EL + D Y + ++SN+ A RW
Sbjct: 484 EFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERW 543
Query: 570 NEVEELRREMSEKDLKKKPGWSCIEVK 596
EV ++R+ M E + K+ G S I+ +
Sbjct: 544 REVGQIRKIMRESGVLKEVGSSWIDSR 570
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 193/462 (41%), Gaps = 67/462 (14%)
Query: 112 SWTSMIAGYISERHVSV---ACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHG 168
SW++++ + V A +L N +P++ L+ +L+ +++ Q+HG
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGE---KPDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 169 YAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMR 228
Y K G + + + NS++R Y S E+ +F E+ DV SWN L+S Y G
Sbjct: 80 YVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQE 139
Query: 229 VAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD--VLQTSL 286
L E+ + N + T ++A A+ G +H ++K G V+ L
Sbjct: 140 GICLFLELHRSDVFP-NEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCL 198
Query: 287 LDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVP 346
+D Y KCG +D +V +F+ + K ++ A+++ +NG + F QM D V
Sbjct: 199 IDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYN 258
Query: 347 EIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARA 406
E L+DA +++ G+ ++A
Sbjct: 259 E----LIDA---------------------------------------FVKSGDFNNAFQ 275
Query: 407 VFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTF----LSLLSACS 462
V MP + +W +++ G+ + EA ++F +M + V F LS++ A
Sbjct: 276 VLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT-----KMHSSGVRFDEYSLSIVLAAV 330
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEA----LSIILKMVILPD 518
+ V + ++ G++ + + ++D++ +CGM+K A ++ K +I+ +
Sbjct: 331 AALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWN 390
Query: 519 SRIWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLS 560
I G + K + +R L+PD + LL+
Sbjct: 391 EMISGYARNGDSIEAIKLFNQLKQERF--LKPDRFTFLNLLA 430
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 160/362 (44%), Gaps = 46/362 (12%)
Query: 2 EEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADA 60
+E P+ + ++WN + +V G+F + F ++ + V + F+F A + +
Sbjct: 114 DEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSP 173
Query: 61 VYGKMTHCVAIQMGLDL-DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
+ G H +++GL+ ++ N +ID Y KC + A VF M +D VSW +++A
Sbjct: 174 L-GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVAS 232
Query: 120 YISERHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
+ + F++M P++VT ++ A S N Q+
Sbjct: 233 CSRNGKLELGLWFFHQMP---NPDTVTYNELIDAFVKSGDFNNAFQV------------- 276
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
S++ + +SWN +++ Y +M S
Sbjct: 277 ----------------------LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHS- 313
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDI 298
G ++ +L++V++A A + G +H K G S V+ ++L+D Y+KCG L
Sbjct: 314 SGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKH 373
Query: 299 SVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE--IWRNLLDAC 356
+ +F + K+ I M+SG+ +NG +EAI LF Q++ E + P+ + NLL C
Sbjct: 374 AELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERF-LKPDRFTFLNLLAVC 432
Query: 357 AN 358
++
Sbjct: 433 SH 434
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 14/275 (5%)
Query: 310 SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVH 369
S+ T+ ++ F G A+ L + D P + +LL N G + L R +H
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPD--ASPLV--HLLRVSGNYGYVSLCRQLH 78
Query: 370 GYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSH 429
GY+ K+ F N + S++ Y ++ A VFD MP DVI+W S++ G+
Sbjct: 79 GYVTKHGF----VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 430 GFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPA-LD 488
G E + F + + PN +F + L+AC+ L G I+ + G+E +
Sbjct: 135 GRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLV-KLGLEKGNVV 193
Query: 489 HHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLEL 548
C++D++G+CG + +A+ ++ + + D+ W A++A+ G LG + ++
Sbjct: 194 VGNCLIDMYGKCGFMDDAV-LVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM--P 250
Query: 549 EPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKD 583
PD Y+ L+ + +G +N ++ +M +
Sbjct: 251 NPDTVTYNELI-DAFVKSGDFNNAFQVLSDMPNPN 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 122/266 (45%), Gaps = 20/266 (7%)
Query: 1 MEEEPN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRAD 59
+ + PN N+ +WN + +V+ + A F KM GV D ++ +V A++++
Sbjct: 277 LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVV 336
Query: 60 AVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG 119
+G + H A ++GLD + + +ID Y KC + A +F M ++++ W MI+G
Sbjct: 337 P-WGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISG 395
Query: 120 YISERHVSVACDLFNKMRVE--LEPNSVTLIVMLQACC-ASTPLNV-----GTQIHGYAV 171
Y A LFN+++ E L+P+ T + +L C P+ V I+ Y +
Sbjct: 396 YARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRI 455
Query: 172 KSGVLMDWSVKN--SVLRMYADKGSTEEVELLFSEIN-KRDVASWNILISFYSMVGDMMR 228
K SV++ S++R +G + + + E D +W L+ S D+
Sbjct: 456 KP------SVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKA 509
Query: 229 VAGLINEMQSLEGHSWNIETLTLVIS 254
+ +M L G + E L +V+S
Sbjct: 510 AKTVAAKMIEL-GDADKDEYLYIVMS 534
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 181/391 (46%), Gaps = 53/391 (13%)
Query: 245 NIETLTLVISAFA--KCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQ 301
+ T V A A K G+L+ + +HC ++ G D+ +L+ Y+ +D ++Q
Sbjct: 114 DFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQ 173
Query: 302 LFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL--------- 352
LF E + +T ++ G ++ + A LF M DLV W +L
Sbjct: 174 LFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVS----WNSLISGYAQMNH 229
Query: 353 --------------------------LDACANLGALKLGRVVHGYL-MKNLFNGPVEGNL 385
L ACA G + G+ +H Y K LF +
Sbjct: 230 CREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFI-----DS 284
Query: 386 HMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEH 445
+ T +++ Y + G I +A +F+ K + W +MI G HG G + YF M+
Sbjct: 285 FLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSS 344
Query: 446 RMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKE 505
++P+ VTF+S+L CSHSGLV E ++ M+ + + + H+ CM DL GR G+++E
Sbjct: 345 GIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEE 404
Query: 506 ALSIILKMVILPDSR----IWGALLAASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSN 561
A +I +M +R W LL ++GN + E A R+ L P++ G + ++
Sbjct: 405 AAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVE 464
Query: 562 VKASAGRWNEVEELRREMS-EKDLKKKPGWS 591
+ A+A RW EV ++R + +K +KK G+S
Sbjct: 465 MYANAERWEEVVKVREIIDRDKKVKKNVGFS 495
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 110/236 (46%), Gaps = 36/236 (15%)
Query: 26 SALST---FKKMRQMGVPHDTFTFPVVNRALSSMR-ADAVYGKMTHCVAIQMGLDLDLYF 81
S+LS+ F +MR+ VP D TFP V +A ++ + D K HC A++ GL DL+
Sbjct: 95 SSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFT 154
Query: 82 CNTMIDFY-------------------------------VKCWCIGCARRVFDLMLHRDV 110
NT+I Y VK I AR +FD M RD+
Sbjct: 155 LNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDL 214
Query: 111 VSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGY 169
VSW S+I+GY H A LF++M + L+P++V ++ L AC S G IH Y
Sbjct: 215 VSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDY 274
Query: 170 AVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGD 225
+ + +D + ++ YA G + +F + + + +WN +I+ +M G+
Sbjct: 275 TKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGN 330
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 151/333 (45%), Gaps = 43/333 (12%)
Query: 137 RVELEPNSVTLIVMLQACCAST--PLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGS 194
R + P+ T + +AC A L + +H A++ G+L D N+++R+Y+
Sbjct: 108 RRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAP 167
Query: 195 TEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI-------- 246
+ LF E +RDV ++N+LI +++R L + M + SWN
Sbjct: 168 IDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQM 227
Query: 247 ----ETLTL------------------VISAFAKCGNLSKGEGVHCLVI-KTGFSDDVLQ 283
E + L +SA A+ G+ KG+ +H K F D L
Sbjct: 228 NHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLA 287
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
T L+DFYAKCG +D ++++F K+ T AM++G +G+ + F++M + +
Sbjct: 288 TGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIK 347
Query: 344 IVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
+ ++L C++ G + R + M++L++ V + + ++ R G I
Sbjct: 348 PDGVTFISVLVGCSHSGLVDEARNLFDQ-MRSLYD--VNREMKHYGCMADLLGRAGLIEE 404
Query: 404 ARAVFDRMPVKD------VIAWTSMIEGFGSHG 430
A + ++MP KD ++AW+ ++ G HG
Sbjct: 405 AAEMIEQMP-KDGGNREKLLAWSGLLGGCRIHG 436
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 2/152 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+ ++WN I + + A+ F +M +G+ D V + + D GK
Sbjct: 213 DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAI-VSTLSACAQSGDWQKGKAI 271
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H + L +D + ++DFY KC I A +F+L + + +W +MI G +
Sbjct: 272 HDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNG 331
Query: 127 SVACDLFNKMRVE-LEPNSVTLIVMLQACCAS 157
+ D F KM ++P+ VT I +L C S
Sbjct: 332 ELTVDYFRKMVSSGIKPDGVTFISVLVGCSHS 363
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 205/482 (42%), Gaps = 85/482 (17%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG--KMTHC 68
WN ++ +V G + +AL ++ MRQ G+ D + P++ RA R +G + H
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRAC---RYLGRFGLCRAFHT 182
Query: 69 VAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSV 128
IQ+GL +L+ N ++ Y K +G A +F M R+ +SW MI G+ E
Sbjct: 183 QVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCES 242
Query: 129 ACDLFNKM-RVELEPNSVT-----------------------------------LIVMLQ 152
A +F M R E +P+ VT L V
Sbjct: 243 AVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFS 302
Query: 153 ACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVAS 212
C L++ ++HGY +K G +N+++ +Y +G ++ E LF +I + + S
Sbjct: 303 VCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIES 362
Query: 213 WNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE------------------------- 247
WN LI+ + G + L +E++ + H N++
Sbjct: 363 WNSLITSFVDAGKLDEALSLFSELEEM-NHVCNVKANVVTWTSVIKGCNVQGRGDDSLEY 421
Query: 248 --------------TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVL-QTSLLDFYAK 292
T+ ++S A+ L+ G +H VI+T S+++L Q +L++ YAK
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAK 481
Query: 293 CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL 352
CG L +F I K I+ +++ G+ +G +A+++F +M + +
Sbjct: 482 CGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAV 541
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP 412
L AC++ G ++ GR + Y M F +E I+++ R G + A + MP
Sbjct: 542 LSACSHAGLVEKGREIF-YSMSKRFG--LEPQQEHYACIVDLLGRVGFLKEASEIVKNMP 598
Query: 413 VK 414
++
Sbjct: 599 ME 600
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 2/161 (1%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N + W I+ G+ +L F++M+ V ++ T + + + A + G+
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNL-GREI 456
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
H I+ + ++ N +++ Y KC + VF+ + +D++SW S+I GY
Sbjct: 457 HGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFA 516
Query: 127 SVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQI 166
A +F++M P+ + L+ +L AC + + G +I
Sbjct: 517 EKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREI 557
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 21/292 (7%)
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
L ++CANL +L+ + VH + +++ F G+ + +++M+ +I+ A+ VFD M
Sbjct: 242 LFESCANLKSLEHSKKVHDHFLQSKF----RGDPKLNNMVISMFGECSSITDAKRVFDHM 297
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
KD+ +W M+ + +G G +AL F M +H ++PN TFL++ AC+ G + E
Sbjct: 298 VDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAF 357
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGV 531
+ SMK GI P +H+ ++ + G+CG + EA I + P + W A+ + +
Sbjct: 358 LHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARL 417
Query: 532 YGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLK--KKPG 589
+G+ L +Y + +++++P A + + + S N V R + ++L K
Sbjct: 418 HGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILEFRNLTFYKDEA 477
Query: 590 WSCIEVKGVSY----GFLSGDITHPEAEE-----------IYAALCTLSRVT 626
KGV Y F+ DI E+ Y +CT R T
Sbjct: 478 KEMAAKKGVVYVPDTRFVLHDIDQEAKEQALLYHSERLAIAYGIICTPPRKT 529
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 19/305 (6%)
Query: 320 GFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNG 379
F ++G +A+ + + + V+ L C L+ + VHG + ++ +
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 380 PVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYF 439
+ N H+ +L MY G + A +VF++M K++ W +I F +GFG +A+ F
Sbjct: 288 DLSSN-HV---LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMF 343
Query: 440 NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGR 499
+ E P+ F + AC G V EG + SM +GI P+++ + +V+++
Sbjct: 344 SRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYAL 403
Query: 500 CGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPD--NAGYHT 557
G + EAL + +M + P+ +W L+ S V+GN LG+Y A+ + L+P N
Sbjct: 404 PGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRLNKQSRE 463
Query: 558 LLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYA 617
VKAS ++ ++ LKK+ G VK F +GD PE +E++
Sbjct: 464 GFIPVKAS------------DVEKESLKKRSGI-LHGVKSSMQEFRAGDTNLPENDELFQ 510
Query: 618 ALCTL 622
L L
Sbjct: 511 LLRNL 515
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 126/507 (24%), Positives = 216/507 (42%), Gaps = 74/507 (14%)
Query: 101 VFDLM----LHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACC 155
VFD M + R V S+T++I Y + +L ++M+ E + P+ +T ++ AC
Sbjct: 163 VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC- 221
Query: 156 ASTPLNVGTQIHGYA--VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINK----RD 209
A L+ + +A G+ D N++L A +G +E E++F +N D
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ +++ L+ + + + +V L+ EM S G +I + +++ A+AK G++ + GV
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMAS-GGSLPDITSYNVLLEAYAKSGSIKEAMGVF 340
Query: 270 CLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQN 324
+ G + + S LL+ + + G+ D QLF E+ + T ++ F +
Sbjct: 341 HQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEG 400
Query: 325 GSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGN 384
G F E + LF M E++ E + ++ AC +G
Sbjct: 401 GYFKEVVTLFHDMVEENIEPDMETYEGIIFACG------------------------KGG 436
Query: 385 LHMETSILNMYIRGGNISSARAVFDRMPVKDVI----AWTSMIEGFGSHGFGFEALKYFN 440
LH + AR + M D++ A+T +IE FG EAL FN
Sbjct: 437 LHED---------------ARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFN 481
Query: 441 LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRC 500
M E P+ TF SLL + + GLV E I S GI D ++ + +
Sbjct: 482 TMHEVGSNPSIETFHSLLYSFARGGLVKESEAI-LSRLVDSGIPRNRDTFNAQIEAYKQG 540
Query: 501 GMVKEALSIILKMVIL---PDSRIWGALLAASGVYGNKTLGEYTAQRLLELE-----PDN 552
G +EA+ + M PD R A+L+ VY L + ++ E++ P
Sbjct: 541 GKFEEAVKTYVDMEKSRCDPDERTLEAVLS---VYSFARLVDECREQFEEMKASDILPSI 597
Query: 553 AGYHTLLSNVKASAGRWNEVEELRREM 579
Y +L+ V RW++V EL EM
Sbjct: 598 MCYCMMLA-VYGKTERWDDVNELLEEM 623
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 50/254 (19%)
Query: 371 YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV----KDVIAWTSMIEGF 426
Y+ + ++ P N H+ T ++++ R G + VFD MP + V ++T++I +
Sbjct: 130 YMQRQIWCKP---NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 427 GSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG---------------- 470
G +G +L+ + M ++ P+ +T+ ++++AC+ GL EG
Sbjct: 187 GRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD 246
Query: 471 ----------CKI----------YYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSII 510
C I + +M G GI P L ++ +V+ FG+ +++ ++
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDG-GIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 511 LKMV---ILPDSRIWGALLAASGVYGN--KTLGEYTAQRLLELEPDNAGYHTLLSNVKAS 565
+M LPD + LL A G+ + +G + + P NA +++L N+
Sbjct: 306 GEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP-NANTYSVLLNLFGQ 364
Query: 566 AGRWNEVEELRREM 579
+GR+++V +L EM
Sbjct: 365 SGRYDDVRQLFLEM 378
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 222/493 (45%), Gaps = 45/493 (9%)
Query: 23 QFHSALSTFKKMRQMGVPHDTFTFPV-VN---RALSSMRADAVYGKMTHCVAIQMGLDLD 78
QF+ L K++ G+ H+ +T + +N R + A +V GK+ +++G + D
Sbjct: 103 QFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV-----MKLGYEPD 157
Query: 79 LYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYISERHVSVACDLFN 134
NT+I + A + D M+ DVV++ S++ G S+A DL
Sbjct: 158 TTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLR 217
Query: 135 KM-----RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMY 189
KM + ++ S + + + C +++ ++ +KS V+ NS++R
Sbjct: 218 KMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVV----TYNSLVRGL 273
Query: 190 ADKGSTEEVELLFSEINKRD----VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
G + LL ++ R+ V ++N+L+ + G + L EM + G S N
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMIT-RGISPN 332
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFR 304
I T ++ + LS+ + L+++ S D++ TSL+ Y ++D +++FR
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 305 EIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI--WRNLLDACAN 358
I + + +T ++ GF Q+G A LFQ+M + ++P++ + LLD +
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG--VLPDVMTYGILLDGLCD 450
Query: 359 LGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK---- 414
G KL + + + ++L ++ + M T+I+ +GG + A +F +P K
Sbjct: 451 NG--KLEKALE--IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKP 506
Query: 415 DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIY 474
+V+ +T MI G G EA M E PN T+ +L+ A G ++ K+
Sbjct: 507 NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLI 566
Query: 475 YSMK-WGFGIEPA 486
MK GF + +
Sbjct: 567 EEMKSCGFSADAS 579
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/376 (19%), Positives = 159/376 (42%), Gaps = 55/376 (14%)
Query: 201 LFSE-INKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE--GHSWNIETLTLVISAFA 257
LF E I R + S F+S + + +++ + LE G + NI TL ++I+ F
Sbjct: 75 LFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFC 134
Query: 258 KCGNLSKGEGVHCLVIKTGFSDD------------------------------------V 281
+C V V+K G+ D V
Sbjct: 135 RCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVV 194
Query: 282 LQTSLLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQNGSFMEAIALFQQM 337
S+++ + G +++ L R++ ++ T ++ ++G AI+LF++M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 338 QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR 397
+ + + + +L+ G G L+K++ + + N+ +L+++++
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDG----ALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 398 GGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
G + A ++ M + ++I + ++++G+ EA +LM+ ++ P+ VT
Sbjct: 311 EGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 454 FLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
F SL+ V +G K++ ++ + A+ ++ +V F + G +K A + +M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAV-TYSILVQGFCQSGKIKLAEELFQEM 429
Query: 514 V---ILPDSRIWGALL 526
V +LPD +G LL
Sbjct: 430 VSHGVLPDVMTYGILL 445
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 140/318 (44%), Gaps = 24/318 (7%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSS----MRADAV 61
++ + +N +R G+++ K M + + TF V+ A+ +
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMI 117
Y +M I G+ ++ NT++D Y + A + DLM+ D+V++TS+I
Sbjct: 321 YKEM-----ITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 118 AGYISERHVSVACDLF-NKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
GY + V +F N + L N+VT +++Q C S + + ++ V GVL
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
D +L D G E+ +F ++ K + ++ I Y+ + + M G + +
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQK---SKMDLGIVMYTTIIEGMCKGGKVEDA 492
Query: 237 QSL------EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTSLLDF 289
+L +G N+ T T++IS K G+LS+ + + + G + +D +L+
Sbjct: 493 WNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRA 552
Query: 290 YAKCGKLDISVQLFREIH 307
+ + G L S +L E+
Sbjct: 553 HLRDGDLTASAKLIEEMK 570
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 211/482 (43%), Gaps = 37/482 (7%)
Query: 23 QFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFC 82
QF+ AL F M + F + ++ M+ V + + I MG+ DLY C
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQI-MGVSHDLYTC 110
Query: 83 NTMIDFYVKCWCIGCAR--------RVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFN 134
N +++ C+C ++ L D+V++TS+I G+ + A + N
Sbjct: 111 NLLMN----CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVN 166
Query: 135 KM-RVELEPNSVTLIVMLQACCASTPLNVG----TQIHGYAVKSGVLMDWSVKNSVLRMY 189
+M + ++P+ V ++ + C + +N Q+ Y ++ V+M S+ N +
Sbjct: 167 QMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL---- 222
Query: 190 ADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
+ G + + L + KR DV ++N LI + G + L NEM + + N
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS-IAPN 281
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLDISVQLFR 304
I T T +I+ F G + + + L+ G F D V TSL++ + KC K+D ++++F
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 305 EIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
E+ K + IT ++ GF Q G A +F M + + + LL G
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNG 401
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV---- 416
+K ++ + K +G V N+ +L+ G + A VF+ M +++
Sbjct: 402 KVKKALMIFEDMQKREMDG-VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGI 460
Query: 417 IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
I +T +I+G G A+ F + ++PN VT+ +++S GL E ++
Sbjct: 461 ITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRK 520
Query: 477 MK 478
MK
Sbjct: 521 MK 522
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 156/380 (41%), Gaps = 54/380 (14%)
Query: 195 TEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE--GHSWNIETLTLV 252
E ++L + R + S +++ M + +IN L+ G S ++ T L+
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYI 312
++ F + ++K GF D+ +
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDI------------------------------V 143
Query: 313 TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI--WRNLLDA-CANLGALKLGRVVH 369
T ++++GF EA+++ QM ++ I P++ + ++D+ C N G V +
Sbjct: 144 TFTSLINGFCLGNRMEEAMSMVNQMV--EMGIKPDVVMYTTIIDSLCKN------GHVNY 195
Query: 370 GY-LMKNLFNGPVEGNLHMETSILNMYIRGGNISSA----RAVFDRMPVKDVIAWTSMIE 424
L + N + ++ M TS++N G A R + R DVI + ++I+
Sbjct: 196 ALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALID 255
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
F G +A + +N M+ + PN T+ SL++ G V E +++Y M+ G
Sbjct: 256 AFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK-GCF 314
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGALLAASGVYGNKTLGEYT 541
P + +T +++ F +C V +A+ I +M + ++ + L+ G G + +
Sbjct: 315 PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEV 374
Query: 542 AQRLLE--LEPDNAGYHTLL 559
++ + P+ Y+ LL
Sbjct: 375 FSHMVSRGVPPNIRTYNVLL 394
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 142/333 (42%), Gaps = 48/333 (14%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSS----MRADAVYGKMTHCVAIQMGLDL 77
G++ A S + M + + D TF + A + A+ +Y +M I+M +
Sbjct: 226 GRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM-----IRMSIAP 280
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYISERHVSVACDLF 133
+++ ++I+ + C+ AR++F LM + DVV++TS+I G+ + V A +F
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIF 340
Query: 134 NKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADK 192
+M + L N++T ++Q NV ++ + V GV + N +L
Sbjct: 341 YEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYN 400
Query: 193 GSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLV 252
G ++ ++F ++ KR+ ++G + NI T ++
Sbjct: 401 GKVKKALMIFEDMQKRE-----------------------------MDGVAPNIWTYNVL 431
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLL-DFYAKCGKLDISVQLFREIHFK-- 309
+ G L K V + K ++ +++ K GK+ +V LF + K
Sbjct: 432 LHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGV 491
Query: 310 --SYITLGAMMSGFIQNGSFMEAIALFQQMQAE 340
+ +T M+SG + G EA LF++M+ +
Sbjct: 492 KPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 145/304 (47%), Gaps = 28/304 (9%)
Query: 323 QNGSFMEAIALFQQMQAEDLVI-VPEI-WRNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
+ G +A+ + + + E V+ +P + W + C + AL+ +VVH ++ ++
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFW--IAQLCGDAQALQEAKVVHEFITSSV---- 211
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFN 440
++ SI+ MY G++ A VF+ MP +++ W +I F +G G +A+ F+
Sbjct: 212 GISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFS 271
Query: 441 LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRC 500
+ +P+ F + AC G ++EG + SM +GI P ++H+ +V +
Sbjct: 272 RFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEP 331
Query: 501 GMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPD--NAGYHTL 558
G + EAL + M P+ +W L+ S V+G+ LG+ + +L+ N
Sbjct: 332 GYLDEALRFVESME--PNVDLWETLMNLSRVHGDLILGDRCQDMVEQLDASRLNKESKAG 389
Query: 559 LSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIYAA 618
L VK+S +L +E ++ + K P + G+ Y +GDI+ PE E+Y A
Sbjct: 390 LVPVKSS--------DLVKEKLQR-MAKGPNY------GIRY-MAAGDISRPENRELYMA 433
Query: 619 LCTL 622
L +L
Sbjct: 434 LKSL 437
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/565 (19%), Positives = 247/565 (43%), Gaps = 76/565 (13%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPV-----VNRALSSMRADAVYGKM 65
+N + + +F +S ++M+ +G+ HD +T+ + R+ S+ A AV KM
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSL-ALAVLAKM 144
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLH----RDVVSWTSMIAGYI 121
+++G + D+ +++++ Y I A + D M+ D ++T++I G
Sbjct: 145 -----MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 122 SERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
S A L ++M + +P+ VT ++ C +++ + K + D
Sbjct: 200 LHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 259
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEM 236
+ N+++ ++ LF+E++ + DV +++ LIS G + L+++M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGK 295
+ + N+ T + +I AF K G L + E ++ +IK D+ +SL++ + +
Sbjct: 320 IERKINP-NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 296 LDISVQLFR----EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
LD + +F + F + +T ++ GF + E + LF++M LV
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLV-------- 430
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
GN T++++ + + + +A+ VF +M
Sbjct: 431 -------------------------------GNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Query: 412 PV----KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
+++ + +++G +G +A+ F + M+P+ T+ ++ +G V
Sbjct: 460 VSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKV 519
Query: 468 SEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGA 524
+G +++ ++ G+ P + + M+ F R G +EA S++ KM LP+S +
Sbjct: 520 EDGWELFCNLSLK-GVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 525 LLAASGVYGNKTLGEYTAQRLLELE 549
L+ A G++ E +A+ + E+
Sbjct: 579 LIRARLRDGDR---EASAELIKEMR 600
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 167/394 (42%), Gaps = 66/394 (16%)
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ +N L+S + + V L +MQ+L G S ++ T ++ I+ F + LS V
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTL-GISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 270 CLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQN 324
++K G+ D++ +SLL+ Y ++ +V L ++ Y T ++ G +
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 325 GSFMEAIALFQQMQAE----DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
EA+AL QM DLV + +++ G + L L+K + G
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVT----YGTVVNGLCKRGDIDLALS----LLKKMEKGK 253
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEAL 436
+E ++ + +I++ + ++ A +F M K DV ++S+I ++G +A
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313
Query: 437 KYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDL 496
+ + M+E ++ PN VTF +L+ A G + E K+Y M
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM------------------- 354
Query: 497 FGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELE------P 550
+K I PD + +L+ +G + L E A+ + EL P
Sbjct: 355 --------------IKRSIDPDIFTYSSLI--NGFCMHDRLDE--AKHMFELMISKDCFP 396
Query: 551 DNAGYHTLLSNVKASAGRWNEVEELRREMSEKDL 584
+ Y TL+ A R E EL REMS++ L
Sbjct: 397 NVVTYSTLIKGF-CKAKRVEEGMELFREMSQRGL 429
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 153/361 (42%), Gaps = 37/361 (10%)
Query: 244 WNIETL---TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISV 300
WN++ + V S F CG+ G +G ++L+ L D K+D +V
Sbjct: 16 WNLQGIGNPPTVPSFFNLCGS---GCWERSFASASGDYREILRNRLSDII----KVDDAV 68
Query: 301 QLFREI----HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDAC 356
LF ++ F S + ++S + F I+L +QMQ + + ++
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 357 ANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP---- 412
L L V +MK + E ++ +S+LN Y IS A A+ D+M
Sbjct: 129 CRRSQLSLALAVLAKMMKLGY----EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 413 VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCK 472
D +T++I G H EA+ + M++ QP+ VT+ ++++ G +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 473 IYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGALLAAS 529
+ M+ G IE + + ++D + + +AL++ +M I PD + +L++
Sbjct: 245 LLKKMEKG-KIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 530 GVYGNKTLGEYTAQRLL------ELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKD 583
YG + A RLL ++ P+ + L+ + G+ E E+L EM ++
Sbjct: 304 CNYGRWS----DASRLLSDMIERKINPNVVTFSALI-DAFVKEGKLVEAEKLYDEMIKRS 358
Query: 584 L 584
+
Sbjct: 359 I 359
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 196/456 (42%), Gaps = 62/456 (13%)
Query: 23 QFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVA-----IQMGLDL 77
+ A++ +M +MG DTFTF + L ++ K + VA +Q G
Sbjct: 168 RISDAVALVDQMVEMGYKPDTFTFTTLIHGL------FLHNKASEAVALVDQMVQRGCQP 221
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLM----LHRDVVSWTSMIAGYISERHVSVACDLF 133
DL T+++ K I A + + M + +VV + ++I RHV VA DLF
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLF 281
Query: 134 NKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADK 192
+M + + PN VT ++ C N G WS + +L
Sbjct: 282 TEMETKGIRPNVVTYNSLINCLC-----NYGR--------------WSDASRLLS----- 317
Query: 193 GSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLT-- 250
+L +IN +V ++N LI + G ++ L EM S + +T+T
Sbjct: 318 ------NMLEKKINP-NVVTFNALIDAFFKEGKLVEAEKLHEEMIQ---RSIDPDTITYN 367
Query: 251 LVISAFAKCGNLSKGEGV-HCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFK 309
L+I+ F L + + + +V K + +L++ + KC +++ V+LFRE+ +
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 310 ----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLG 365
+ +T ++ GF Q G A +F+QM + + + LL + G L
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 366 RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK-DVIAWTSMIE 424
V+ YL K+ +E N+ + +++ + G + A +F + +K DV+ + +MI
Sbjct: 488 LVIFKYLQKS----EMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMIS 543
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSA 460
G S EA F M E PNS T+ +L+ A
Sbjct: 544 GLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 148/337 (43%), Gaps = 34/337 (10%)
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ +N L+S + + V L +MQ+L G S ++ T ++ I+ F + LS V
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTL-GISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 270 CLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQN 324
++K G+ D++ +SLL+ Y ++ +V L ++ Y T ++ G +
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 325 GSFMEAIALFQQMQAE----DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
EA+AL QM DLV + +++ G + L L+ +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVT----YGTVVNGLCKRGDIDLAL----NLLNKMEAAR 253
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEAL 436
++ N+ + +I++ + ++ A +F M K +V+ + S+I ++G +A
Sbjct: 254 IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDAS 313
Query: 437 KYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDL 496
+ + M+E ++ PN VTF +L+ A G + E K++ M I+ ++D T +L
Sbjct: 314 RLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM-----IQRSIDPDTITYNL 368
Query: 497 F-------GRCGMVKEALSIILKMVILPDSRIWGALL 526
R K+ ++ LP+ + + L+
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
NT+ + I+ G SA FK+M VP D T+ ++ L S YGK+
Sbjct: 432 NTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCS------YGKLD 485
Query: 67 HCVAI-----QMGLDLDLYFCNTMIDFYVKCWCIGCARRVF-DLMLHRDVVSWTSMIAGY 120
+ I + ++L+++ NTMI+ K +G A +F L + DVV++ +MI+G
Sbjct: 486 TALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGL 545
Query: 121 ISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
S+R + A DLF KM+ + PNS T +++A ++ SG + D
Sbjct: 546 CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605
Query: 180 SVKNSVLRMYAD 191
S + V M D
Sbjct: 606 STISLVTNMLHD 617
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/499 (22%), Positives = 223/499 (44%), Gaps = 40/499 (8%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTF-PVVNRALSSMR-ADAV-- 61
+N +++ I Q AL+ KM ++G D T ++N R +DAV
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 62 YGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMI 117
G+M ++MG D + NT+I + A + D M+ + D+V++ ++
Sbjct: 174 VGQM-----VEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 118 AGYISERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
G + +A L KM ++EP V ++ A C +N + G+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGL 232
+ NS++R + G + L S++ +R +V +++ LI + G ++ L
Sbjct: 289 PNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 348
Query: 233 INEM--QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVI-KTGFSDDVLQTSLLDF 289
+EM +S++ +I T + +I+ F L + + + L+I K F + V +L+
Sbjct: 349 YDEMIKRSIDP---DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 290 YAKCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIV 345
+ K ++D ++LFRE+ + + +T ++ GF Q A +F+QM ++ ++
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDG--VL 463
Query: 346 PEI--WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
P+I + LLD N G ++ VV YL ++ +E +++ ++ + G +
Sbjct: 464 PDIMTYSILLDGLCNNGKVETALVVFEYLQRS----KMEPDIYTYNIMIEGMCKAGKVED 519
Query: 404 ARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
+F + +K +V+ +T+M+ GF G EA F M E P+S T+ +L+
Sbjct: 520 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIR 579
Query: 460 ACSHSGLVSEGCKIYYSMK 478
A G + ++ M+
Sbjct: 580 AHLRDGDKAASAELIREMR 598
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/481 (19%), Positives = 211/481 (43%), Gaps = 34/481 (7%)
Query: 21 LGQFHSALSTFKKMRQMGVPHDTFTFPVV-----NRALSSMRADAVYGKMTHCVAIQMGL 75
+ +F +S ++M+ +G+ H+ +T+ ++ R+ S+ A AV KM +++G
Sbjct: 94 MNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSL-ALAVLAKM-----MKLGY 147
Query: 76 DLDLYFCNTMIDFYVKCWCIGCARRVFDLML----HRDVVSWTSMIAGYISERHVSVACD 131
+ D+ N++++ + I A + M+ D ++ ++I G S A
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 132 LFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYA 190
L ++M V+ +P+ VT +++ C +++ + + + + N+++
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 191 DKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
+ + + LF+E++ + +V ++N LI G + L+++M + + N+
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINP-NV 326
Query: 247 ETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFR- 304
T + +I AF K G L + E ++ +IK D+ +SL++ + +LD + +F
Sbjct: 327 VTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFEL 386
Query: 305 ---EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+ F + +T ++ GF + E + LF++M LV + L+
Sbjct: 387 MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARE 446
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK----DVI 417
++V K + + V ++ + +L+ G + +A VF+ + D+
Sbjct: 447 CDNAQIV----FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIY 502
Query: 418 AWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM 477
+ MIEG G + F + ++PN VT+ +++S GL E ++ M
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREM 562
Query: 478 K 478
K
Sbjct: 563 K 563
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 102/500 (20%), Positives = 197/500 (39%), Gaps = 96/500 (19%)
Query: 173 SGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMR---V 229
SGV D+ K S+ R+ D + V L + R S S + M + V
Sbjct: 43 SGVRYDYR-KISINRL-NDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLV 100
Query: 230 AGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLD 288
L +MQ+L G S N+ T +++I+ F + LS V ++K G+ D++ SLL+
Sbjct: 101 ISLGEQMQNL-GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159
Query: 289 FYAKCGKLDISVQLFREIHFKSY------------------------------------- 311
+ ++ +V L ++ Y
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP 219
Query: 312 --ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK------ 363
+T G +++G + G A++L ++M+ + I+ ++DA N +
Sbjct: 220 DLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLF 279
Query: 364 -----------------LGRVVHGY--------LMKNLFNGPVEGNLHMETSILNMYIRG 398
L R + Y L+ ++ + N+ +++++ +++
Sbjct: 280 TEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Query: 399 GNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTF 454
G + A ++D M + D+ ++S+I GF H EA F LM+ PN VT+
Sbjct: 340 GKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 399
Query: 455 LSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV 514
+L+ + V EG +++ M G+ +T ++ F + A + +MV
Sbjct: 400 NTLIKGFCKAKRVDEGMELFREMSQR-GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 515 ---ILPDSRIWGALLAASGVYGNKTLG------EYTAQRLLELEPDNAGYHTLLSNVKAS 565
+LPD + LL G+ N + EY + ++EPD Y+ ++ +
Sbjct: 459 SDGVLPDIMTYSILL--DGLCNNGKVETALVVFEYLQRS--KMEPDIYTYNIMIEGM-CK 513
Query: 566 AGRWNEVEELRREMSEKDLK 585
AG+ + +L +S K +K
Sbjct: 514 AGKVEDGWDLFCSLSLKGVK 533
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 218/472 (46%), Gaps = 41/472 (8%)
Query: 21 LGQFHSALSTFKKMRQMGVPHDTFTFPVV-----NRALSSMRADAVYGKMTHCVAIQMGL 75
+ +F +S ++M+ +G+ H+ +T+ + R+ S+ A A+ GKM +++G
Sbjct: 88 MNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSL-ALAILGKM-----MKLGY 141
Query: 76 DLDLYFCNTMIDFYVKCWCIGCARRVFDLML----HRDVVSWTSMIAGYISERHVSVACD 131
+ N++++ + I A + D M+ D V++T+++ G S A
Sbjct: 142 GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVA 201
Query: 132 LFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYA 190
L +M V+ +P+ VT ++ C ++ + K + D + N+++
Sbjct: 202 LVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLC 261
Query: 191 DKGSTEEVELLFSEIN----KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH-SWN 245
++ LF+++ K DV ++N LIS G + L+++M LE + + +
Sbjct: 262 KYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM--LEKNINPD 319
Query: 246 IETLTLVISAFAKCGNLSKGEGVHCLVIKTG--FSDDVLQTSLLDFYAKCGKLDISVQLF 303
+ +I AF K G L + E ++ ++K+ F D V +L+ + K +++ +++F
Sbjct: 320 LVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF 379
Query: 304 REIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI--WRNLLDACA 357
RE+ + + +T ++ GF Q A +F+QM ++ + P+I + LLD
Sbjct: 380 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG--VHPDIMTYNILLDGLC 437
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK--- 414
N G ++ VV Y+ K ++ ++ T+++ + G + +F + +K
Sbjct: 438 NNGNVETALVVFEYMQKR----DMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVK 493
Query: 415 -DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSG 465
+V+ +T+M+ GF G EA F M E PNS T+ +L+ A G
Sbjct: 494 PNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 140/317 (44%), Gaps = 22/317 (6%)
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ ++ L+S + + V L +MQ+L G S N+ T ++ I+ F + LS +
Sbjct: 75 IVEFSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTYSIFINYFCRRSQLSLALAIL 133
Query: 270 CLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQN 324
++K G+ ++ SLL+ + ++ +V L ++ Y +T ++ G Q+
Sbjct: 134 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 193
Query: 325 GSFMEAIALFQQMQAE----DLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
EA+AL ++M + DLV + L AL L + + G
Sbjct: 194 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL--------LNKMEKGK 245
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEAL 436
+E ++ + +I++ + ++ A +F++M K DV + +I ++G +A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 437 KYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDL 496
+ + M+E + P+ V F +L+ A G + E K+Y M P + + ++
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 497 FGRCGMVKEALSIILKM 513
F + V+E + + +M
Sbjct: 366 FCKYKRVEEGMEVFREM 382
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 119/273 (43%), Gaps = 17/273 (6%)
Query: 322 IQNGSFMEAIALFQQM-QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGP 380
+Q+ +AI LF M ++ + E + LL A A + L + G M+NL
Sbjct: 51 LQDLKLDDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDL-VISLGEQMQNL---G 105
Query: 381 VEGNLHMETSILNMYIRGGNISSARAVFDRMPV----KDVIAWTSMIEGFGSHGFGFEAL 436
+ NL+ + +N + R +S A A+ +M ++ S++ GF EA+
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165
Query: 437 KYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDL 496
+ M+E QP++VTF +L+ SE + M G +P L + +++
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK-GCQPDLVTYGAVING 224
Query: 497 FGRCGMVKEALSIILKM---VILPDSRIWGALLAASGVYG--NKTLGEYTAQRLLELEPD 551
+ G AL+++ KM I D I+ ++ Y + + ++PD
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 552 NAGYHTLLSNVKASAGRWNEVEELRREMSEKDL 584
Y+ L+S + + GRW++ L +M EK++
Sbjct: 285 VFTYNPLISCL-CNYGRWSDASRLLSDMLEKNI 316
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 109/582 (18%), Positives = 239/582 (41%), Gaps = 58/582 (9%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG 63
+P+ T + L ++ + G H A TF++MR G+ + +Y
Sbjct: 306 KPSRT-EFGLMVKFYGRRGDMHRARETFERMRARGITPTS----------------RIYT 348
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
+ H A+ G D+D + C R++ + + +V+++ ++ G+
Sbjct: 349 SLIHAYAV--GRDMD--------------EALSCVRKMKEEGIEMSLVTYSVIVGGFSKA 392
Query: 124 RHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
H A F++ R+ N+ ++ A C + + + + G+ ++
Sbjct: 393 GHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIY 452
Query: 183 NSVLRMYADKGSTEEVELLFSEINK----RDVASWNILISFYSMVGDMMRVAGLINEMQS 238
++++ Y ++ ++F + + V ++ LI+ Y+ VG + + + M+
Sbjct: 453 HTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKE 512
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLD 297
EG N++T +++I+ F K + + V ++K G DV L +++ + G +D
Sbjct: 513 -EGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMD 571
Query: 298 ISVQLFREI----HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLL 353
++Q +E+ H + T ++ G+ ++G ++ +F M+ V + L+
Sbjct: 572 RAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLI 631
Query: 354 DACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV 413
+ ++ + V ++ + V N H T I+ Y G+ A F R+
Sbjct: 632 NGLVE--KRQMEKAVE--ILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Query: 414 K----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSE 469
+ D+ + ++++ G AL M + NS + L+ + G V E
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 747
Query: 470 GCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVIL---PDSRIWGALL 526
+ MK G++P + +T + + G + A I +M L P+ + + L+
Sbjct: 748 AADLIQQMK-KEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLI 806
Query: 527 A--ASGVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASA 566
A K L Y + + ++PD A YH LL+++ + A
Sbjct: 807 KGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRA 848
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 211/476 (44%), Gaps = 69/476 (14%)
Query: 110 VVSWTSMIAGYI-SERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIH 167
V+S+ +++ I S+R++S A ++F +M ++ PN T ++++ C + ++V +
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLF 228
Query: 168 GYAVKSGVLMDWSVKNSVLRMYADKGSTEE-VELLFSEINK---RDVASWNILISFYSMV 223
G L + N+++ Y ++ +LL S K ++ S+N++I+
Sbjct: 229 DKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 224 GDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ 283
G M V+ ++ EM G+S + T +I + K GN + +H +++ G + V+
Sbjct: 289 GRMKEVSFVLTEMNR-RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 284 -TSLLDFYAKCGKLDISVQLFREIHFKSYI----TLGAMMSGFIQNGSFMEAIALFQQMQ 338
TSL+ K G ++ +++ ++ + T ++ GF Q G EA + ++M
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 339 AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRG 398
D P + +N + G H T
Sbjct: 408 --DNGFSPSVVT--------------------------YNALING--HCVT--------- 428
Query: 399 GNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTF 454
G + A AV + M K DV+++++++ GF EAL+ M+E ++P+++T+
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 455 LSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV 514
SL+ E C +Y M G+ P +T +++ + G +++AL + +MV
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEM-LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 515 ---ILPDSRIWGALLAASGVYGNKTLGEYTAQRLL------ELEPDNAGYHTLLSN 561
+LPD + L+ +G+ NK A+RLL E P + YHTL+ N
Sbjct: 548 EKGVLPDVVTYSVLI--NGL--NKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 152/362 (41%), Gaps = 36/362 (9%)
Query: 243 SWNIETLTLVISAFAKCGNLS-------KGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGK 295
S N+ T ++I F GN+ K E CL + V +L+D Y K K
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL------PNVVTYNTLIDGYCKLRK 255
Query: 296 LDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
+D +L R + K + I+ +++G + G E + +M + +
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
L+ G V+H ++++ V TS+++ + GN++ A D+M
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSV----ITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 412 PVKDVI----AWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
V+ + +T++++GF G+ EA + M ++ P+ VT+ +L++ +G +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 468 SEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGA 524
+ + MK G+ P + ++ ++ F R V EAL + +MV I PD+ + +
Sbjct: 432 EDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 525 LLAASGVYGNKTLGE----YTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMS 580
L+ G + E Y + L PD Y T L N G + +L EM
Sbjct: 491 LI--QGFCEQRRTKEACDLYEEMLRVGLPPDEFTY-TALINAYCMEGDLEKALQLHNEMV 547
Query: 581 EK 582
EK
Sbjct: 548 EK 549
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 120/284 (42%), Gaps = 34/284 (11%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAI-----QMGLD 76
G + A ++M G T+ + + V GKM +A+ + GL
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNAL------INGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 77 LDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYISERHVSVACDL 132
D+ +T++ + + + + A RV M+ + D ++++S+I G+ +R ACDL
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 133 FNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYAD 191
+ +M RV L P+ T ++ A C L Q+H V+ GVL D + ++
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 192 KGSTEE-----VELLFSEINKRDVASWNIL-----ISFYSMVG--------DMMRVAGLI 233
+ T E ++L + E DV ++ I F S+V MM A +
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 234 NEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF 277
E + H + ++I + G++ K ++ ++K+GF
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGF 671
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 115/541 (21%), Positives = 240/541 (44%), Gaps = 73/541 (13%)
Query: 21 LGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMR----ADAVYGKMTHCVAIQMGLD 76
+ +F +S +KM +GV H+ +T+ ++ L A A+ GKM +++G
Sbjct: 78 MKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM-----MKLGYG 132
Query: 77 LDLYFCNTMIDFYVKCWCIGCARRVFDLML----HRDVVSWTSMIAGYISERHVSVACDL 132
+ N++++ + I A + D M+ D V++T+++ G S A L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 133 FNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYAD 191
+M V+ +P+ VT ++ C ++ + K + D + ++V+
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 192 KGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIE 247
++ LF+E++ + DV +++ LIS G + L+++M LE N
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM--LE-RKINPN 309
Query: 248 TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIH 307
+T SL+D +AK GKL + +LF E+
Sbjct: 310 VVTF--------------------------------NSLIDAFAKEGKLIEAEKLFDEMI 337
Query: 308 FKSY----ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
+S +T ++++GF + EA +F M ++D + + L++ G K
Sbjct: 338 QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN-----GFCK 392
Query: 364 LGRVVHGY-LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD-----VI 417
+VV G L +++ + GN T++++ + + + +A+ VF +M V D ++
Sbjct: 393 AKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM-VSDGVHPNIM 451
Query: 418 AWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM 477
+ ++++G +G +A+ F + + +M+P+ T+ + +G V +G ++ S+
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 478 KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGALLAASGVYGN 534
G++P + + M+ F + G+ +EA ++ +KM LPDS + L+ A G+
Sbjct: 512 SLK-GVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 535 K 535
K
Sbjct: 571 K 571
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 208/483 (43%), Gaps = 44/483 (9%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYG-K 64
+N +N+ I Q AL+ KM ++G T L+S+ +G +
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVT-------LNSLLNGFCHGNR 150
Query: 65 MTHCVA-----IQMGLDLDLYFCNTMIDFYVK----CWCIGCARRVFDLMLHRDVVSWTS 115
++ VA ++MG D T++ + + R+ D+V++ +
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 116 MIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG 174
+I G +A +L NKM + ++E + V ++ + C ++ + G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 175 VLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVA 230
+ D +S++ + G + L S++ +R +V ++N LI ++ G ++
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 231 GLINEM--QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVI-KTGFSDDVLQTSLL 287
L +EM +S++ NI T +I+ F L + + + L++ K D V +L+
Sbjct: 331 KLFDEMIQRSIDP---NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLI 387
Query: 288 DFYAKCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
+ + K K+ ++LFR++ + + +T ++ GF Q A +F+QM ++
Sbjct: 388 NGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG-- 445
Query: 344 IVPEI--WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNI 401
+ P I + LLD G L+ VV YL K+ +E +++ + + G +
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS----KMEPDIYTYNIMSEGMCKAGKV 501
Query: 402 SSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSL 457
+F + +K DVIA+ +MI GF G EA F M E P+S T+ +L
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 458 LSA 460
+ A
Sbjct: 562 IRA 564
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 159/363 (43%), Gaps = 31/363 (8%)
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE- 240
+N++L + D E V+L + R S S + M + +I+ + +E
Sbjct: 38 RNALLHLKLD----EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEI 93
Query: 241 -GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDI 298
G S N+ T ++I+ + LS + ++K G+ ++ SLL+ + ++
Sbjct: 94 LGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 153
Query: 299 SVQLFREIHFKSY----ITLGAMMSGFIQNGSFMEAIALFQQMQAE----DLVIVPEIWR 350
+V L ++ Y +T ++ G Q+ EA+AL ++M + DLV +
Sbjct: 154 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213
Query: 351 NLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDR 410
L AL L + + G +E ++ + +++++ + ++ A +F
Sbjct: 214 GLCKRGEPDLALNL--------LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTE 265
Query: 411 MPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGL 466
M K DV ++S+I ++G +A + + M+E ++ PN VTF SL+ A + G
Sbjct: 266 MDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK 325
Query: 467 VSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWG 523
+ E K++ M I+P + + +++ F + EA I MV LPD +
Sbjct: 326 LIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYN 384
Query: 524 ALL 526
L+
Sbjct: 385 TLI 387
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 201/496 (40%), Gaps = 70/496 (14%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
++ +++ + VD G A F+KM G+ + N L+ + D Y
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGL---VLSVDSCNVYLTRLSKDC-YKTA 228
Query: 66 THCVAI----QMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMI 117
T + ++G+ ++ N +I F + I A + LM + DV+S+++++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 118 AGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
GY + L M R L+PNS ++ C L + ++ G+L
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVA----SWNILISFYSMVGDMMRVAGL 232
D V +++ + +G F E++ RD+ ++ +IS + +GDM+ L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 233 INEM--QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDF 289
+EM + LE S T T +I+ + K G++ VH +I+ G S +V+ T+L+D
Sbjct: 409 FHEMFCKGLEPDSV---TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 290 YAKCGKLDISVQLFRE---IHFKSYI-TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIV 345
K G LD + +L E I + I T ++++G ++G+ EA+ L + +A L
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 346 PEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSAR 405
+ L+DA Y + G + A+
Sbjct: 526 TVTYTTLMDA---------------------------------------YCKSGEMDKAQ 546
Query: 406 AVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
+ M K ++ + ++ GF HG + K N M+ + PN+ TF SL+
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 462 SHSGLVSEGCKIYYSM 477
+ IY M
Sbjct: 607 CIRNNLKAATAIYKDM 622
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 155/357 (43%), Gaps = 16/357 (4%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+T+ + I G +A F +M + D T+ + + GK+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYIS 122
H + + GL+ D +I+ Y K + A RV + M+ +VV++T++I G
Sbjct: 410 HEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 123 ERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
E + A +L ++M ++ L+PN T ++ C S + ++ G +G+ D
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQ 237
+++ Y G ++ + + E+ + + ++N+L++ + + G + L+N M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKL 296
+ +G + N T ++ + NL ++ + G D +L+ + K +
Sbjct: 589 A-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 297 DISVQLFREIHFKSYI----TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW 349
+ LF+E+ K + T ++ GF++ F+EA +F QM+ E L EI+
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 157/363 (43%), Gaps = 63/363 (17%)
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLD-- 297
G WN+ + +VI + G + + + L+ G++ DV+ +++++ Y + G+LD
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 298 ---ISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
I V + + SYI G+++ + EA F +M + I+P+
Sbjct: 301 WKLIEVMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEAFSEMIRQG--ILPDT------ 351
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
VV+ T++++ + + G+I +A F M +
Sbjct: 352 ------------VVY-------------------TTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 415 D----VIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
D V+ +T++I GF G EA K F+ M ++P+SVTF L++ +G + +
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 471 CKIYYSMKWGFGIEPALDHHTCMVDLF---GRCGMVKEALSIILKMVILPDSRIWGALLA 527
+++ M G P + +T ++D G E L + K+ + P+ + +++
Sbjct: 441 FRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 528 ASGVYGN-----KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEK 582
GN K +GE+ A L D Y TL+ + +G ++ +E+ +EM K
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAA---GLNADTVTYTTLM-DAYCKSGEMDKAQEILKEMLGK 555
Query: 583 DLK 585
L+
Sbjct: 556 GLQ 558
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 201/496 (40%), Gaps = 70/496 (14%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
++ +++ + VD G A F+KM G+ + N L+ + D Y
Sbjct: 173 SDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGL---VLSVDSCNVYLTRLSKDC-YKTA 228
Query: 66 THCVAI----QMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMI 117
T + ++G+ ++ N +I F + I A + LM + DV+S+++++
Sbjct: 229 TAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVV 288
Query: 118 AGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL 176
GY + L M R L+PNS ++ C L + ++ G+L
Sbjct: 289 NGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVA----SWNILISFYSMVGDMMRVAGL 232
D V +++ + +G F E++ RD+ ++ +IS + +GDM+ L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 233 INEM--QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDF 289
+EM + LE S T T +I+ + K G++ VH +I+ G S +V+ T+L+D
Sbjct: 409 FHEMFCKGLEPDSV---TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 290 YAKCGKLDISVQLFRE---IHFKSYI-TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIV 345
K G LD + +L E I + I T ++++G ++G+ EA+ L + +A L
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 346 PEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSAR 405
+ L+DA Y + G + A+
Sbjct: 526 TVTYTTLMDA---------------------------------------YCKSGEMDKAQ 546
Query: 406 AVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSAC 461
+ M K ++ + ++ GF HG + K N M+ + PN+ TF SL+
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 462 SHSGLVSEGCKIYYSM 477
+ IY M
Sbjct: 607 CIRNNLKAATAIYKDM 622
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 155/357 (43%), Gaps = 16/357 (4%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
+T+ + I G +A F +M + D T+ + + GK+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYIS 122
H + + GL+ D +I+ Y K + A RV + M+ +VV++T++I G
Sbjct: 410 HEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 123 ERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSV 181
E + A +L ++M ++ L+PN T ++ C S + ++ G +G+ D
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 182 KNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQ 237
+++ Y G ++ + + E+ + + ++N+L++ + + G + L+N M
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKL 296
+ +G + N T ++ + NL ++ + G D +L+ + K +
Sbjct: 589 A-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 297 DISVQLFREIHFKSYI----TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW 349
+ LF+E+ K + T ++ GF++ F+EA +F QM+ E L EI+
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 157/363 (43%), Gaps = 63/363 (17%)
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLD-- 297
G WN+ + +VI + G + + + L+ G++ DV+ +++++ Y + G+LD
Sbjct: 241 GVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 298 ---ISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
I V + + SYI G+++ + EA F +M + I+P+
Sbjct: 301 WKLIEVMKRKGLKPNSYI-YGSIIGLLCRICKLAEAEEAFSEMIRQG--ILPDT------ 351
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
VV+ T++++ + + G+I +A F M +
Sbjct: 352 ------------VVY-------------------TTLIDGFCKRGDIRAASKFFYEMHSR 380
Query: 415 D----VIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
D V+ +T++I GF G EA K F+ M ++P+SVTF L++ +G + +
Sbjct: 381 DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDA 440
Query: 471 CKIYYSMKWGFGIEPALDHHTCMVDLF---GRCGMVKEALSIILKMVILPDSRIWGALLA 527
+++ M G P + +T ++D G E L + K+ + P+ + +++
Sbjct: 441 FRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 528 ASGVYGN-----KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEK 582
GN K +GE+ A L D Y TL+ + +G ++ +E+ +EM K
Sbjct: 500 GLCKSGNIEEAVKLVGEFEAA---GLNADTVTYTTLM-DAYCKSGEMDKAQEILKEMLGK 555
Query: 583 DLK 585
L+
Sbjct: 556 GLQ 558
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 144/322 (44%), Gaps = 27/322 (8%)
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
+T+ S IQ G++ EA+ + ++ + + L C AL+ RVVH
Sbjct: 86 VTIETFDSLCIQ-GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHEC 144
Query: 372 LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGF 431
++ P ++ +I+ MY ++ A VF+ MP + M+ F ++G+
Sbjct: 145 IIA--LVSPC--DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGY 200
Query: 432 GFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHT 491
G EA+ F E +PN F + S C+ +G V EG + +M +GI P+++H+
Sbjct: 201 GEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYH 260
Query: 492 CMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELEPD 551
+ + G + EAL+ + +M + P +W L+ S V+G+ LG+ A+ + +L+
Sbjct: 261 SVTKMLATSGHLDEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLDA- 319
Query: 552 NAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSY---GFLSGDIT 608
T L V +SAG L + +KK+P + Y F D +
Sbjct: 320 -----TRLDKV-SSAG-------LVATKASDFVKKEPS-----TRSEPYFYSTFRPVDSS 361
Query: 609 HPEAEEIYAALCTLSRVTQDFG 630
HP+ IY L +L ++ G
Sbjct: 362 HPQMNIIYETLMSLRSQLKEMG 383
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 239 LEGHSWNIETLTLVISAFAK-CGN---LSKGEGVH-CLVIKTGFSDDVLQTSLLDFYAKC 293
LE + ++ + L+ AK CG L VH C++ D + ++++ Y+ C
Sbjct: 110 LENKGYAMDLIRLL--GLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGC 167
Query: 294 GKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLL 353
+D ++++F E+ + TL MM F+ NG EAI LF + + E EI+ +
Sbjct: 168 CSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVF 227
Query: 354 DACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPV 413
C G +K G + + + P + H S+ M G++ A +RMP+
Sbjct: 228 STCTLTGDVKEGSLQFQAMYREYGIVPSMEHYH---SVTKMLATSGHLDEALNFVERMPM 284
Query: 414 K-DVIAWTSMIEGFGSHG 430
+ V W +++ HG
Sbjct: 285 EPSVDVWETLMNLSRVHG 302
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 109/540 (20%), Positives = 241/540 (44%), Gaps = 83/540 (15%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVV-----NRALSSMRADAVYGKM 65
+N + + +F +S +KM+++G+ H+ +T+ ++ R+ S+ A A+ GKM
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISL-ALALLGKM 146
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLML----HRDVVSWTSMIAGYI 121
+++G + + +++++ Y I A + D M+ D +++T++I G
Sbjct: 147 -----MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 122 SERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCA----STPLNVGTQIHGYAVKSGVL 176
S A L ++M + +PN VT V++ C N+ ++ +++ V+
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVV 261
Query: 177 MDWSVKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGL 232
+ +V +S+ + + + LF+E+ + +V +++ LIS + L
Sbjct: 262 IYSTVIDSLCKYRHEDDALN----LFTEMENKGVRPNVITYSSLISCLCNYERWSDASRL 317
Query: 233 INEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYA 291
+++M + + N+ T +I AF K G L + E ++ +IK D+ +SL++ +
Sbjct: 318 LSDMIERKINP-NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 292 KCGKLDISVQLFR----EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE 347
+LD + +F + F + +T +++GF + E + LF++M LV
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLV---- 432
Query: 348 IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
GN T++++ + + + +A+ V
Sbjct: 433 -----------------------------------GNTVTYTTLIHGFFQARDCDNAQMV 457
Query: 408 FDRMPVKD-----VIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
F +M V D ++ + ++++G +G +A+ F + +M+P T+ ++
Sbjct: 458 FKQM-VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDS 519
+G V +G ++ S+ G++P + + M+ F R G+ +EA ++ KM LPDS
Sbjct: 517 KAGKVEDGWDLFCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 110/478 (23%), Positives = 206/478 (43%), Gaps = 48/478 (10%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGK- 64
+N +N+ I Q AL+ KM ++G T LSS+ +GK
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT-------LSSLLNGYCHGKR 170
Query: 65 MTHCVA-----IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTS 115
++ VA ++MG D T+I A + D M+ R ++V++
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 116 MIAGYISERHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCA----STPLNVGTQIHGYA 170
++ G + +A +L NKM ++E N V ++ + C LN+ T++
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 171 VKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDM 226
V+ V+ +S++ + + L S++ +R +V ++N LI + G +
Sbjct: 291 VRPNVI----TYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 227 MRVAGLINEM--QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVI-KTGFSDDVLQ 283
+ L +EM +S++ +I T + +I+ F L + + + L+I K F + V
Sbjct: 347 VEAEKLYDEMIKRSIDP---DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY 403
Query: 284 TSLLDFYAKCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQA 339
+L++ + K ++D V+LFRE+ + + +T ++ GF Q A +F+QM +
Sbjct: 404 NTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 463
Query: 340 EDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGG 399
+ + + LLD G L+ VV YL ++ +E ++ ++ + G
Sbjct: 464 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS----KMEPTIYTYNIMIEGMCKAG 519
Query: 400 NISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVT 453
+ +F + +K DVI + +MI GF G EA F M E P+S T
Sbjct: 520 KVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 164/396 (41%), Gaps = 70/396 (17%)
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ +N L+S + + V L +MQ L G S N+ T ++I+ F + +S +
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALL 143
Query: 270 CLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQN 324
++K G+ ++ +SLL+ Y ++ +V L ++ Y IT ++ G +
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 325 GSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY--LMKNLFN---- 378
EA+AL +M + R G + G G L NL N
Sbjct: 204 NKASEAVALVDRM----------VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFE 434
+E N+ + +++++ + + A +F M K +VI ++S+I ++ +
Sbjct: 254 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD 313
Query: 435 ALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMV 494
A + + M+E ++ PN VTF +L+ A G + E K+Y M
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM----------------- 356
Query: 495 DLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLELE----- 549
+K I PD + +L+ +G + L E A+ + EL
Sbjct: 357 ----------------IKRSIDPDIFTYSSLI--NGFCMHDRLDE--AKHMFELMISKDC 396
Query: 550 -PDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDL 584
P+ Y+TL++ A R +E EL REMS++ L
Sbjct: 397 FPNVVTYNTLINGF-CKAKRIDEGVELFREMSQRGL 431
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 127/562 (22%), Positives = 226/562 (40%), Gaps = 65/562 (11%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYF 81
G+ A+ F+ M Q G P +T TF + L C ++ L L + F
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCL--------------CKNDEVTLALKMLF 632
Query: 82 CNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVELE 141
M+D +GC DV ++ ++I G + V A F++M+ +
Sbjct: 633 --KMMD-------MGCVP---------DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 674
Query: 142 PNSVTLIVMLQACCASTPLNVGTQI-----HGYAVKSGVLMDWSVKNSVLRMYADKGSTE 196
P+ VTL +L ++ + +I + A + L + S+L +
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVS 734
Query: 197 EVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE-GHSWNIETLTLVISA 255
E L + RD S + I YS + + A + E + + G + T L+I
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Query: 256 FAKCGNLSKGEGVHCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHF----KS 310
+ + + V V TG DV + LLD Y K GK+D +L++E+ +
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAE-DLVIVPEIWRNLLDACANLGALKLGRVVH 369
IT ++SG ++ G+ +A+ L+ + ++ D + L+D + G L
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRL------- 907
Query: 370 GYLMKNLFNGPVEGNLHMETSILNMYIRG----GNISSARAVFDRMPVK----DVIAWTS 421
Y K LF G ++ +I N+ I G G +A A+F RM + D+ ++
Sbjct: 908 -YEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 966
Query: 422 MIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGF 481
+++ G E L YF + E + P+ V + +++ S + E ++ MK
Sbjct: 967 LVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Query: 482 GIEPALDHHTCMVDLFGRCGMVKEALSI---ILKMVILPDSRIWGALLAASGVYGNKTLG 538
GI P L + ++ G GMV+EA I I + + P+ + AL+ + G
Sbjct: 1027 GITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHA 1086
Query: 539 EYTAQRLLE--LEPDNAGYHTL 558
Q ++ P+ Y L
Sbjct: 1087 YAVYQTMVTGGFSPNTGTYEQL 1108
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 111/558 (19%), Positives = 227/558 (40%), Gaps = 74/558 (13%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSM----RADAVYGKMTHCVAIQMGLDL 77
G+ F M++ + DT T+ + ++LS +A KM + G L
Sbjct: 132 GKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMR-----EFGFVL 186
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLML----HRDVVSWTSMIAGYISERHVSVACDLF 133
+ Y N +I +K A V+ M+ + +++S++ G R + L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 134 NKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD---WSVKNSVLRMY 189
+M + L+PN T + ++ + +N +I G D ++V L
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 190 ADKGSTEEV-ELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
+EV E + + +K D ++ L+ +S D+ V +EM+ +GH ++ T
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK-DGHVPDVVT 365
Query: 249 LTLVISAFAKCGNLS---------KGEGVH----------CLVIKTGFSDDVLQ------ 283
T+++ A K GN + +G+ C +++ DD L+
Sbjct: 366 FTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNME 425
Query: 284 -----------TSLLDFYAKCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFM 328
+D+Y K G +++ F ++ K + + A + + G
Sbjct: 426 SLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDR 485
Query: 329 EAIALFQQMQAEDLVIVPE-IWRNLLDACANLGALKLGRVVHGY-LMKNLFNGPVEGNLH 386
EA +F ++ D+ +VP+ + N++ C + K+G + L+ + E ++
Sbjct: 486 EAKQIFYGLK--DIGLVPDSVTYNMMMKCYS----KVGEIDEAIKLLSEMMENGCEPDVI 539
Query: 387 METSILNMYIRGGNISSARAVFDRMP----VKDVIAWTSMIEGFGSHGFGFEALKYFNLM 442
+ S++N + + A +F RM V+ + +++ G G +G EA++ F M
Sbjct: 540 VVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGM 502
++ PN++TF +L + V+ K+ + M G P + + ++ + G
Sbjct: 600 VQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM-MDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 503 VKEALSII--LKMVILPD 518
VKEA+ +K ++ PD
Sbjct: 659 VKEAMCFFHQMKKLVYPD 676
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/488 (20%), Positives = 201/488 (41%), Gaps = 43/488 (8%)
Query: 26 SALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLD-----LDLY 80
S + K+M +G+ + +TF + R L RA GK+ I +D D+
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLG--RA----GKINEAYEILKRMDDEGCGPDVV 294
Query: 81 FCNTMIDFYVKCWCIGCARRVFDLM---LHR-DVVSWTSMIAGYISERHVSVACDLFNKM 136
+ID + CA+ VF+ M H+ D V++ +++ + R + +++M
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 137 RVELE-PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS----VLRMYAD 191
+ P+ VT +++ A C + G+L + N+ +LR++
Sbjct: 355 EKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRL 414
Query: 192 KGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTL 251
+ E + S K ++ + I +Y GD + +M++ +G + NI
Sbjct: 415 DDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT-KGIAPNIVACNA 473
Query: 252 VISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFK- 309
+ + AK G + + + + G D V ++ Y+K G++D +++L E+
Sbjct: 474 SLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENG 533
Query: 310 ---SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGR 366
I + ++++ + EA +F +M+ L + LL A LG K G+
Sbjct: 534 CEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLL---AGLG--KNGK 588
Query: 367 VVHGYLMKNLFNGPVEGNLHMETSILNMYI----RGGNISSA-RAVFDRMP---VKDVIA 418
+ LF G V+ T N + ++ A + +F M V DV
Sbjct: 589 IQEAI---ELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFT 645
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
+ ++I G +G EA+ +F+ M+ + P+ VT +LL + L+ + KI +
Sbjct: 646 YNTIIFGLVKNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Query: 479 WGFGIEPA 486
+ +PA
Sbjct: 705 YNCADQPA 712
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 122/547 (22%), Positives = 234/547 (42%), Gaps = 68/547 (12%)
Query: 10 AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGK-MTHC 68
++N+ I Q AL+ KM ++G D T LSS+ +GK ++
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT-------LSSLLNGYCHGKRISEA 169
Query: 69 VAIQ-----MGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAG 119
VA+ M + NT+I A + D M+ R D+ ++ +++ G
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 120 YISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACC----ASTPLNVGTQIHGYAVKSG 174
+ +A L KM + ++E + V ++ A C + LN+ T++ ++
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 175 VLMDWSVKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVA 230
V+ NS++R + G + L S++ +R +V +++ LI + G ++
Sbjct: 290 VV----TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 231 GLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVI-KTGFSDDVLQTSLLDF 289
L +EM +I T + +I+ F L + + + L+I K F + V +L+
Sbjct: 346 KLYDEMIK-RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 290 YAKCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIV 345
+ K +++ ++LFRE+ + + +T ++ G Q G A +F++M ++ +
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG--VP 462
Query: 346 PEI--WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
P+I + LLD G L+ VV YL K+ +E +++ ++ + G +
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKS----KMEPDIYTYNIMIEGMCKAGKVED 518
Query: 404 ARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
+F + +K +VI +T+MI GF G EA F M E PNS T+ +L+
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIR 578
Query: 460 ACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDS 519
A G + ++ M+ CG V +A +I + + +L D
Sbjct: 579 ARLRDGDKAASAELIKEMR--------------------SCGFVGDASTISMVINMLHDG 618
Query: 520 RIWGALL 526
R+ + L
Sbjct: 619 RLEKSYL 625
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/455 (19%), Positives = 181/455 (39%), Gaps = 81/455 (17%)
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ +N L+S + + V L MQ+L S+++ + ++I+ F + L V
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYNILINCFCRRSQLPLALAVL 138
Query: 270 CLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSY----------------- 311
++K G+ D++ +SLL+ Y ++ +V L ++ Y
Sbjct: 139 GKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLH 198
Query: 312 ----------------------ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW 349
T G +++G + G A++L ++M+ + I+
Sbjct: 199 NKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 258
Query: 350 RNLLDACANLGALK-----------------------LGRVVHGY--------LMKNLFN 378
++DA N + L R + Y L+ ++
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 318
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFE 434
+ N+ +++++ +++ G + A ++D M + D+ ++S+I GF H E
Sbjct: 319 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 435 ALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMV 494
A F LM+ PN VT+ +L+ + V EG +++ M + + ++T +
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 495 DLF--GRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN--KTLGEYTAQRLLELEP 550
LF G C M ++ ++ + PD + LL YG K L + + ++EP
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 551 DNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLK 585
D Y+ ++ + AG+ + +L +S K +K
Sbjct: 499 DIYTYNIMIEGM-CKAGKVEDGWDLFCSLSLKGVK 532
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/551 (20%), Positives = 241/551 (43%), Gaps = 44/551 (7%)
Query: 6 NNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSM-------RA 58
+N ++L IRT+V + A F +R G T + N + S+ A
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGF---TVSIDACNALIGSLVRIGWVELA 219
Query: 59 DAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVK---CWCIGC-ARRVFDLMLHRDVVSWT 114
VY +++ G+ +++Y N M++ K +G +V + ++ D+V++
Sbjct: 220 WGVYQEISRS-----GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274
Query: 115 SMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKS 173
++I+ Y S+ + A +L N M + P T ++ C ++ ++S
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 174 GVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVAS----WNILISFYSMVGDMMRV 229
G+ D + S+L KG E E +FS++ RDV ++ ++S ++ G++ +
Sbjct: 335 GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKA 394
Query: 230 AGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLD 288
N ++ N+ T++I + + G +S + +++ G + DV+ ++L
Sbjct: 395 LMYFNSVKEAGLIPDNV-IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 289 FYAKCGKLDISVQLFREIH----FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVI 344
K L + +LF E+ F TL ++ G + G+ A+ LFQ+M+ + + +
Sbjct: 454 GLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 513
Query: 345 VPEIWRNLLDACANLGALKLGRVVHGYLM-KNLFNGPVEGNLHMETSILNMYIRGGNISS 403
+ LLD +G + + + ++ K + P+ ++ ++N G+++
Sbjct: 514 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI-----LVNALCSKGHLAE 568
Query: 404 ARAVFDRMPVKD----VIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLS 459
A V+D M K+ V+ SMI+G+ G + + M+ P+ +++ +L+
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628
Query: 460 ACSHSGLVSEGCKIYYSM-KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---I 515
+S+ + M + G+ P + + ++ F R +KEA ++ KM+ +
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688
Query: 516 LPDSRIWGALL 526
PD + ++
Sbjct: 689 NPDRSTYTCMI 699
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 157/392 (40%), Gaps = 70/392 (17%)
Query: 221 SMVGDMMRVA------GLINEMQSLEGHSWNIETLTLVISAFAKCGNLSK-GEGVHCLVI 273
+++G ++R+ G+ E+ S G N+ TL ++++A K G + K G + +
Sbjct: 205 ALIGSLVRIGWVELAWGVYQEI-SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQE 263
Query: 274 KTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQNGSFME 329
K + D V +L+ Y+ G ++ + +L + K + T +++G ++G +
Sbjct: 264 KGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYER 323
Query: 330 AIALFQQMQAEDLVIVPEIWRNLL-DACANLGALKLGRVVHGYLMKNLFNGPVEGNLHME 388
A +F +M L +R+LL +AC
Sbjct: 324 AKEVFAEMLRSGLSPDSTTYRSLLMEAC-------------------------------- 351
Query: 389 TSILNMYIRGGNISSARAVFDRMPVKDVIA----WTSMIEGFGSHGFGFEALKYFNLMME 444
+ G++ VF M +DV+ ++SM+ F G +AL YFN + E
Sbjct: 352 --------KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 445 HRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM-KWGFGIEPALDHHTCMVDLFGRC--G 501
+ P++V + L+ G++S + M + G A+D T L G C
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC----AMDVVTYNTILHGLCKRK 459
Query: 502 MVKEALSIILKMV---ILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE--LEPDNAGYH 556
M+ EA + +M + PDS L+ GN Q++ E + D Y+
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 557 TLLSNVKASAGRWNEVEELRREMSEKDLKKKP 588
TLL G + +E+ +M K++ P
Sbjct: 520 TLLDGF-GKVGDIDTAKEIWADMVSKEILPTP 550
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/524 (19%), Positives = 202/524 (38%), Gaps = 90/524 (17%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N + + I+T + +F A+ K+M++ G+ D F + + LS +
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR-------- 502
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHV 126
+D F M++ +K + ++ + I+GYI
Sbjct: 503 --------MDEARSFLVEMVENGLK----------------PNAFTYGAFISGYIEASEF 538
Query: 127 SVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSV 185
+ A +MR + PN V ++ C + + V G+L D +
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598
Query: 186 LRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQSLEG 241
+ ++ E +F E+ + DV S+ +LI+ +S +G+M + + + +EM EG
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE-EG 657
Query: 242 HSWNIETLTLVISAFAKCGNLSKG-EGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISV 300
+ N+ +++ F + G + K E + + +K + V +++D Y K G L
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL---- 713
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
EA LF +M+ + LV ++ L+D C L
Sbjct: 714 ---------------------------AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 361 ALKLGRVVHGYLMKNL------FNGPVE-----GNLHMETSILNMYIRGGNISSARAVFD 409
++ + G K FN + G ++T +LN + G FD
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS--------FD 798
Query: 410 RMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSE 469
R + + + MI+ G A + F+ M + P +T+ SLL+ G +E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858
Query: 470 GCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+ + GIEP ++ +++ F + GM +AL ++ +M
Sbjct: 859 MFPV-FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 119/603 (19%), Positives = 247/603 (40%), Gaps = 75/603 (12%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPV-VNRALSSMRADAVYGKMTHCV 69
+++ I + + A S +M +GV D T+ + ++ L ADA G + V
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVV----SWTSMIAGYISERH 125
+ G+++ Y + I K + A+ +FD M+ ++ ++ S+I GY E++
Sbjct: 340 S--HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 126 VSVACDLFNKMR---VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
V +L +M+ + + P + +V + C+S L+ I + SG + +
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVV--KGMCSSGDLDGAYNIVKEMIASGCRPNVVIY 455
Query: 183 NSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQS 238
++++ + + + E+ ++ D+ +N LI S M + EM
Sbjct: 456 TTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVE 515
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLD 297
G N T IS + + + + + + G + VL T L++ Y K GK+
Sbjct: 516 -NGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 298 ISVQLFREIHFKSYI----TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLL 353
+ +R + + + T +M+G +N +A +F++M+ + I P+++
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKG--IAPDVFS--- 629
Query: 354 DACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP- 412
+G L +N + + GN+ A ++FD M
Sbjct: 630 ---------------YGVL-------------------INGFSKLGNMQKASSIFDEMVE 655
Query: 413 ---VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSE 469
+VI + ++ GF G +A + + M + PN+VT+ +++ SG ++E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 470 GCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSII--LKMVILPDSRIWGALLA 527
+++ MK G+ P +T +VD R V+ A++I K + + AL+
Sbjct: 716 AFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 528 ASGVYGNKTLGEYTAQRLLE------LEPDNAGYHTLLSNVKASAGRWNEVEELRREMSE 581
+G L RL++ +P++ Y+ ++ + G +EL +M
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYL-CKEGNLEAAKELFHQMQN 833
Query: 582 KDL 584
+L
Sbjct: 834 ANL 836
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 111/502 (22%), Positives = 209/502 (41%), Gaps = 77/502 (15%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRA----DAVYGKMT 66
+N I V +F A + + M+ MG FT+ L ++ DA+ M
Sbjct: 47 YNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDME 106
Query: 67 HCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYIS 122
+G D++ N +D + +G A + F M+ R DVVS+T +I G
Sbjct: 107 -----TLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFR 161
Query: 123 ERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSG-VLMDWS 180
V+ A +++N M R + P++ ++ C + +++ ++ +KS V +
Sbjct: 162 AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTV 221
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINK----RDVASWNILISFYSMVGDMMRVAGLINEM 236
V N+++ + G E+ E L S ++K D+ ++N+L+++Y + R G++ EM
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 237 Q----SLEGHSWN-IETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYA 291
L+ +S+N + +S KC N E + GF D V ++L++ +
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKE-----MEPRGFCDVVSYSTLIETFC 336
Query: 292 KCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPE 347
+ + +LF E+ K + +T +++ F++ G+
Sbjct: 337 RASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN-------------------SS 377
Query: 348 IWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAV 407
+ + LLD LG L R+ + T+IL+ + GN+ A V
Sbjct: 378 VAKKLLDQMTELG-LSPDRIFY-------------------TTILDHLCKSGNVDKAYGV 417
Query: 408 FDRM----PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSH 463
F+ M D I++ S+I G G EA+K F M P+ +TF ++
Sbjct: 418 FNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIR 477
Query: 464 SGLVSEGCKIYYS-MKWGFGIE 484
+S K++ M GF ++
Sbjct: 478 GKKLSAAYKVWDQMMDKGFTLD 499
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 127/271 (46%), Gaps = 11/271 (4%)
Query: 79 LYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKM-- 136
+ F N ++ +V C + R++FD M HRD SW + G I A LF M
Sbjct: 123 ITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLK 182
Query: 137 ---RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVL--MDWSVKNSVLRMYAD 191
+ + S L +L+AC +G Q+H K G + D + S++R Y +
Sbjct: 183 HSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGE 242
Query: 192 KGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTL 251
E+ L+ +++ + +W ++ G+ V EM + G N+ +
Sbjct: 243 FRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGN-HGIKKNVSVFSN 301
Query: 252 VISAFAKCGNLSK-GEGVHCLVIKTGFSDDVL-QTSLLDFYAKCGKLDISVQLFREIHFK 309
V+ A + + + G+ VH IK GF D L + L++ Y K GK+ + ++F+ +
Sbjct: 302 VLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDE 361
Query: 310 SYITL-GAMMSGFIQNGSFMEAIALFQQMQA 339
+ ++ AM++ ++QNG ++EAI L QM+A
Sbjct: 362 TSVSCWNAMVASYMQNGIYIEAIKLLYQMKA 392
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 121/284 (42%), Gaps = 20/284 (7%)
Query: 165 QIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVG 224
Q+H +KS + + N +L M+ G + +F + RD SW I+ +G
Sbjct: 111 QVH--IMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMG 168
Query: 225 DMMRVAGLINEM--QSLEGH----SWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF- 277
D A L M S +G SW L V+ A A + G+ VH L K GF
Sbjct: 169 DYEDAAFLFVSMLKHSQKGAFKIPSW---ILGCVLKACAMIRDFELGKQVHALCHKLGFI 225
Query: 278 --SDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQ 335
D L SL+ FY + L+ + + ++ + + A ++ + G F E I F
Sbjct: 226 DEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFI 285
Query: 336 QMQAEDLVIVPEIWRNLLDACANLG-ALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNM 394
+M + ++ N+L AC+ + + G+ VH +K F E + + ++ M
Sbjct: 286 EMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGF----ESDCLIRCRLIEM 341
Query: 395 YIRGGNISSARAVFDRMPVKDVIA-WTSMIEGFGSHGFGFEALK 437
Y + G + A VF + ++ W +M+ + +G EA+K
Sbjct: 342 YGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIK 385
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 103/238 (43%), Gaps = 10/238 (4%)
Query: 10 AWNLTIRTHVDLGQFHSA----LSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKM 65
+W + +++G + A +S K ++ ++ V +A + +R D GK
Sbjct: 156 SWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIR-DFELGKQ 214
Query: 66 THCVAIQMGL--DLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAG-YIS 122
H + ++G + D Y ++I FY + C+ A V + + + V+W + + Y
Sbjct: 215 VHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYRE 274
Query: 123 ERHVSVACDLFNKMRVELEPNSVTLIVMLQACC-ASTPLNVGTQIHGYAVKSGVLMDWSV 181
V D ++ N +L+AC S G Q+H A+K G D +
Sbjct: 275 GEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLI 334
Query: 182 KNSVLRMYADKGSTEEVELLF-SEINKRDVASWNILISFYSMVGDMMRVAGLINEMQS 238
+ ++ MY G ++ E +F S ++ V+ WN +++ Y G + L+ +M++
Sbjct: 335 RCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGIYIEAIKLLYQMKA 392
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/454 (22%), Positives = 198/454 (43%), Gaps = 41/454 (9%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHRDVVS----WTSMIAGY----ISERHVSVACDLFN 134
+T+ Y+ C + A R M VV W S+I + + VS+ +++
Sbjct: 62 HTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSL---IYS 118
Query: 135 KM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKG 193
KM + P+ L V++ + C L+ + V S +D N+V+ + G
Sbjct: 119 KMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVISGLCEHG 175
Query: 194 STEEVELLFSEINK----RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETL 249
+E SE+ K D S+N LI + VG+ +R L++E+ L N+ T
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL-----NLITH 230
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIH- 307
T+++S++ NL E + ++ +GF DV+ +S+++ K GK+ L RE+
Sbjct: 231 TILLSSYY---NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEE 287
Query: 308 ---FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKL 364
+ +++T ++ + + A+AL+ QM + + ++ L+D G L+
Sbjct: 288 MSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLRE 347
Query: 365 GRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM----PVKDVIAWT 420
K L N+ T++++ + G++SSA + +M + +V+ ++
Sbjct: 348 AEKT----FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 421 SMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWG 480
SMI G+ G EA+ M + + PN T+ +++ +G ++ M+
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRL- 462
Query: 481 FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV 514
G+E +V+ R G +KE ++ MV
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMV 496
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 125/540 (23%), Positives = 247/540 (45%), Gaps = 60/540 (11%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSM-RADAVYGKM 65
+ A N+ I + +G+ A+S +R + DT T+ V L AD Y +
Sbjct: 128 DVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQFL 184
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERH 125
+ V +MG+ D NT+ID + K A+ + D + ++++ T +++ Y +
Sbjct: 185 SEMV--KMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHA 242
Query: 126 VSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVG---------TQIHGYAVKSGV 175
+ A + M + +P+ VT ++ C + G ++ V
Sbjct: 243 IEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTT 299
Query: 176 LMDWSVKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAG 231
L+D K ++ R L+S++ R D+ + +L+ GD +R A
Sbjct: 300 LVDSLFKANIYR---------HALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD-LREAE 349
Query: 232 LINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVI-KTGFSDDVLQTSLLDFY 290
+M + N+ T T ++ K G+LS E + ++ K+ + V +S+++ Y
Sbjct: 350 KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 409
Query: 291 AKCGKLDISVQLFREIHFKSYI----TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVP 346
K G L+ +V L R++ ++ + T G ++ G + G AI L ++M+ +I
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR----LIGV 465
Query: 347 EIWRNLLDACANLGALKLGRV--VHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSA 404
E +LDA N ++GR+ V G L+K++ + V + TS+++++ +GG+ +A
Sbjct: 466 EENNYILDALVN-HLKRIGRIKEVKG-LVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAA 523
Query: 405 RAVFDRMPVK----DVIAWTSMIEG---FGSHGFGFEALKYFNLMMEHRMQPNSVTFLSL 457
A + M + DV+++ +I G FG G + + M E ++P+ TF +
Sbjct: 524 LAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA----YKGMREKGIEPDIATFNIM 579
Query: 458 LSACSHSGLVSEGC-KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVIL 516
+++ G SEG K++ MK GI+P+L +V + G ++EA+ I+ +M+++
Sbjct: 580 MNSQRKQG-DSEGILKLWDKMK-SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLM 637
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 118/609 (19%), Positives = 241/609 (39%), Gaps = 64/609 (10%)
Query: 24 FHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLYFCN 83
+ AL+ + +M G+P D + V+ L D + T + ++ ++
Sbjct: 310 YRHALALYSQMVVRGIPVDLVVYTVLMDGLFKA-GDLREAEKTFKMLLEDNQVPNVVTYT 368
Query: 84 TMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYISERHVSVACDLFNKMRVE 139
++D K + A + ML + +VV+++SMI GY+ + + A L KM +
Sbjct: 369 ALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ 428
Query: 140 -LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEV 198
+ PN T ++ + + ++ GV + + ++++ G +EV
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEV 488
Query: 199 ELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVIS 254
+ L ++ + D ++ LI + GD EMQ G W++ + ++IS
Sbjct: 489 KGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQE-RGMPWDVVSYNVLIS 547
Query: 255 AFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHF----KS 310
K G + + K D +++ K G + ++L+ ++ S
Sbjct: 548 GMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPS 607
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHG 370
++ ++ +NG EAI + QM ++ +R LD + H
Sbjct: 608 LMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH- 666
Query: 371 YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK----DVIAWTSMIEGF 426
+ L + ++ + + +++ + G A V M + D + + S++ G+
Sbjct: 667 ---ETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGY 723
Query: 427 --GSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIE 484
GSH +AL +++MME + PN T+ +++ S +GL+ E K MK G+
Sbjct: 724 FVGSHVR--KALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK-SRGMR 780
Query: 485 PALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQR 544
P + ++ + G +K +++I +M+ A G
Sbjct: 781 PDDFTYNALISGQAKIGNMKGSMTIYCEMI-------------ADG-------------- 813
Query: 545 LLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGVSYGFLS 604
L P + Y+ L+S A+ G+ + EL +EM ++ + C + G L
Sbjct: 814 ---LVPKTSTYNVLISEF-ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG-----LC 864
Query: 605 GDITHPEAE 613
THP+ E
Sbjct: 865 KLCTHPDVE 873
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 120/265 (45%), Gaps = 30/265 (11%)
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
L C + AL+ RVVH + P++ + +++ MY + A VF+ M
Sbjct: 118 LAKLCGEVEALEEARVVHDCIT------PLDARSYH--TVIEMYSGCRSTDDALNVFNEM 169
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
P ++ W +MI +G G A+ F +E +P+ F ++ AC G ++EG
Sbjct: 170 PKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGL 229
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVILPDSRIWGALLAASGV 531
+ SM +G+ +++ + ++++ CG + EAL + +M + P +W L+ V
Sbjct: 230 LHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMNLCWV 289
Query: 532 YGNKTLGEYTAQRLLELEP------DNAGYHTLLSNVKASAGRWNEVEELRR-EMSEKDL 584
G LG+ A+ + +L+ NAG L KAS +++ELR +M D
Sbjct: 290 QGYLELGDRFAELIKKLDASRMSKESNAG----LVAAKASDSAMEKLKELRYCQMIRDDP 345
Query: 585 KKKPGWSCIEVKGVSYGFLSGDITH 609
KK+ + F +GD +H
Sbjct: 346 KKR-----------MHEFRAGDTSH 359
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/491 (20%), Positives = 213/491 (43%), Gaps = 34/491 (6%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVV-----NRALSSMRADAVYGKM 65
+N + + +F +S +KM+++G+ H+ +T+ ++ R+ S+ A A+ GKM
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISL-ALALLGKM 71
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLML----HRDVVSWTSMIAGYI 121
+++G + + +++++ Y I A + D M+ D +++T++I G
Sbjct: 72 -----MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 122 SERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
S A L ++M + +PN VT V++ C +++ + + + D
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEM 236
+ N+++ ++ LF E+ + +V +++ LIS G + L+++M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGK 295
+ + N+ T +I AF K G + E +H +IK D+ SL++ + +
Sbjct: 247 IE-KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 296 LDISVQLFR----EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
LD + Q+F + F T ++ GF ++ + LF++M LV +
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
L+ + G + V K + + V ++ + +L+ G + A VFD M
Sbjct: 366 LIQGLFHDGDCDNAQKV----FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 412 PVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
D+ +T+MIEG G + F + ++PN VT+ +++S L+
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 468 SEGCKIYYSMK 478
E + MK
Sbjct: 482 QEAYALLKKMK 492
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 143/335 (42%), Gaps = 30/335 (8%)
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ +N L+S + + V L +MQ L G S N+ T ++I+ F + +S +
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALL 68
Query: 270 CLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQN 324
++K G+ ++ +SLL+ Y ++ +V L ++ Y IT ++ G +
Sbjct: 69 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128
Query: 325 GSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY--LMKNLFN---- 378
EA+AL +M + R G + G G L NL N
Sbjct: 129 NKASEAVALVDRM----------VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFE 434
+E ++ + +I++ + ++ A +F M K +V+ ++S+I S+G +
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 435 ALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMV 494
A + + M+E ++ PN VTF +L+ A G E K++ M I+P + + ++
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM-IKRSIDPDIFTYNSLI 297
Query: 495 DLF---GRCGMVKEALSIILKMVILPDSRIWGALL 526
+ F R K+ ++ PD + L+
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLI 332
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/554 (20%), Positives = 233/554 (42%), Gaps = 74/554 (13%)
Query: 21 LGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLY 80
+ +F +S ++M+ +G+PH+ +T+ + + +C + L L L
Sbjct: 94 MNKFDVVISLGEQMQNLGIPHNHYTYSI----------------LINCFCRRSQLPLALA 137
Query: 81 FCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE- 139
M+ L ++V+ +S++ GY + +S A L ++M V
Sbjct: 138 VLGKMM----------------KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
+PN+VT ++ + + V G D V+ +G T +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT---D 238
Query: 200 LLFSEINKRD-------VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLV 252
L F+ +NK + V +N +I M L EM++ +G N+ T + +
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMET-KGIRPNVVTYSSL 297
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFK-- 309
IS G S + +I+ + DV ++L+D + K GKL + +L+ E+ +
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 310 --SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRV 367
S +T ++++GF + EA +F+ M ++ + L+ G K RV
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIK-----GFCKYKRV 412
Query: 368 VHGYLMKNLFNGPVEGNLHMETSILNMYIRG----GNISSARAVFDRMPVKD-----VIA 418
G +F + L T N+ I+G G+ A+ +F M V D ++
Sbjct: 413 EEGM---EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM-VSDGVPPNIMT 468
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
+ ++++G +G +A+ F + +M+P T+ ++ +G V +G ++ ++
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGALLAASGVYGNK 535
G++P + + M+ F R G +EA ++ +M LP+S + L+ A G++
Sbjct: 529 LK-GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 536 TLGEYTAQRLLELE 549
E +A+ + E+
Sbjct: 588 ---EASAELIKEMR 598
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/428 (17%), Positives = 172/428 (40%), Gaps = 46/428 (10%)
Query: 110 VVSWTSMIAGYISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHG 168
++ ++ +++ V L +M+ + + N T +++ C + L + + G
Sbjct: 81 IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 140
Query: 169 YAVKSGVLMDWSVKNSVLRMYADKGSTEE----VELLFSEINKRDVASWNILISFYSMVG 224
+K G + +S+L Y E V+ +F + + ++N LI +
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200
Query: 225 DMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQT 284
LI+ M + +G ++ T +V++ K G D L
Sbjct: 201 KASEAMALIDRMVA-KGCQPDLVTYGVVVNGLCKRG------------------DTDLAF 241
Query: 285 SLLDFYAKCGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVI 344
+LL+ + GKL+ V ++ I + G + +A+ LF++M+ + +
Sbjct: 242 NLLNKMEQ-GKLEPGVLIYNTI-----------IDGLCKYKHMDDALNLFKEMETKGIRP 289
Query: 345 VPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSA 404
+ +L+ N G L+ ++ + ++ +++++ +++ G + A
Sbjct: 290 NVVTYSSLISCLCNYGRWSDA----SRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 405 RAVFDRMPVKDV----IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSA 460
++D M + + + ++S+I GF H EA + F M+ P+ VT+ +L+
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 461 CSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLF--GRCGMVKEALSIILKMVILPD 518
V EG +++ M + + ++ + LF G C M +E ++ + P+
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 519 SRIWGALL 526
+ LL
Sbjct: 466 IMTYNTLL 473
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 119/507 (23%), Positives = 217/507 (42%), Gaps = 47/507 (9%)
Query: 109 DVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCA-STPLNVGTQI 166
DV S+TS+I+ + + A ++F KM + +P +T V+L TP N T +
Sbjct: 207 DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 167 HGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEIN----KRDVASWNILISFYSM 222
G+ D N+++ +E +F E+ D ++N L+ Y
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGK 326
Query: 223 VGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVL 282
++NEM L G S +I T +ISA+A+ G L + + + + G DV
Sbjct: 327 SHRPKEAMKVLNEM-VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVF 385
Query: 283 Q-TSLLDFYAKCGKLDISVQLFREIH----FKSYITLGAMMSGFIQNGSFMEAIALFQQM 337
T+LL + + GK++ ++ +F E+ + T A + + G F E + +F ++
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 338 QAEDLVIVPEI--WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMY 395
L P+I W LL A G + V G + G V T +++ Y
Sbjct: 446 NVCGLS--PDIVTWNTLL---AVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT-LISAY 499
Query: 396 IRGGNISSARAVFDRM----PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNS 451
R G+ A V+ RM D+ + +++ G ++ K M + R +PN
Sbjct: 500 SRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNE 559
Query: 452 VTFLSLLSACSHS---GLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKE--- 505
+T+ SLL A ++ GL+ + YS G IEP +V + +C ++ E
Sbjct: 560 LTYCSLLHAYANGKEIGLMHSLAEEVYS---GV-IEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 506 ALSIILKMVILPDSRIWGALLAASGVYGNKTLG-------EYTAQRLLELEPDNAGYHTL 558
A S + + PD ++++ +YG + + +Y +R P A Y++L
Sbjct: 616 AFSELKERGFSPDITTLNSMVS---IYGRRQMVAKANGVLDYMKER--GFTPSMATYNSL 670
Query: 559 LSNVKASAGRWNEVEELRREMSEKDLK 585
+ + + + + + EE+ RE+ K +K
Sbjct: 671 MY-MHSRSADFGKSEEILREILAKGIK 696
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 153/356 (42%), Gaps = 20/356 (5%)
Query: 172 KSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEIN----KRDVASWNILISFYSMVGDM- 226
+ G +D S++ +A+ G E +F ++ K + ++N++++ + +G
Sbjct: 201 EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW 260
Query: 227 MRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFS-DDVLQTS 285
++ L+ +M+S +G + + T +I+ + + V + GFS D V +
Sbjct: 261 NKITSLVEKMKS-DGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNA 319
Query: 286 LLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQNGSFMEAIALFQQMQAED 341
LLD Y K + ++++ E+ + +T +++S + ++G EA+ L QM +
Sbjct: 320 LLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 342 LVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNI 401
+ LL G ++ + + + N + N+ + + MY G
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSI----FEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 402 SSARAVFDRMPV----KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSL 457
+ +FD + V D++ W +++ FG +G E F M P TF +L
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTL 495
Query: 458 LSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+SA S G + +Y M G+ P L + ++ R GM +++ ++ +M
Sbjct: 496 ISAYSRCGSFEQAMTVYRRM-LDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM 550
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 129/598 (21%), Positives = 238/598 (39%), Gaps = 96/598 (16%)
Query: 22 GQFHSALSTFKKMRQMGV--PHDTFTFPVVNRALSSMRADAV--------YGKMTHCVAI 71
G AL F Q+GV P D+ + ++N + S R D + G +
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDS-VYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218
Query: 72 QMGLDLDLYFCN----TMIDFY-------VKCWCIGC--------------ARRVFDLML 106
G LD FC +DF+ + + C A R+ L+L
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVL 278
Query: 107 H----RDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLN 161
+VV++ ++I G+ + A DLF M +EP+ + ++ + L
Sbjct: 279 DCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 162 VGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEI----NKRDVASWNILI 217
+G ++ A+ GV +D V +S + +Y G +++ + +V ++ ILI
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 218 SFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF 277
G + G+ ++ G +I T + +I F KCGNL G ++ +IK G+
Sbjct: 399 KGLCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457
Query: 278 SDDV-LQTSLLDFYAKCG----KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIA 332
DV + L+D +K G + SV++ + + + +++ G+ + F EA+
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALK 517
Query: 333 LFQQMQA-------------------EDLV---IVPEIWRNLLDACAN---LGALKLGRV 367
+F+ M ED + P I L D + + V
Sbjct: 518 VFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 368 VHGYLMK--------NLFNGPVEGNLHMETSILNMYIRG----GNISSARAVFDRMPV-- 413
V L K FN +EG + + N I G + A +F+ + V
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 414 --KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
+ + T +I + A++ F++M E +PN+VT+ L+ S S +
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGALL 526
K++ M+ GI P++ ++ ++D + G V EA +I + + +LPD + L+
Sbjct: 698 KLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILI 754
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 171/375 (45%), Gaps = 48/375 (12%)
Query: 150 MLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD 209
+++ CC ++ +I Y+ + GV++ ++SV RM ++ V+L+ +K
Sbjct: 152 LMECCCRYGMVDKALEIFVYSTQLGVVIP---QDSVYRMLNSLIGSDRVDLIADHFDK-- 206
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ G+ E + H + ++ L F K G ++K H
Sbjct: 207 -----------------LCRGGI--EPSGVSAHGFVLDAL------FCK-GEVTKALDFH 240
Query: 270 CLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREI----HFKSYITLGAMMSGFIQNG 325
LV++ GF ++ + + +++++ +L + + +T +++GF + G
Sbjct: 241 RLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRG 300
Query: 326 SFMEAIALFQQMQAEDLVIVPEI--WRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEG 383
A LF+ M+ I P++ + L+D G L +G H + L G V+
Sbjct: 301 EMDRAFDLFKVMEQRG--IEPDLIAYSTLIDGYFKAGMLGMG---HKLFSQALHKG-VKL 354
Query: 384 NLHMETSILNMYIRGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYF 439
++ + +S +++Y++ G++++A V+ RM + +V+ +T +I+G G +EA +
Sbjct: 355 DVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMY 414
Query: 440 NLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGR 499
+++ M+P+ VT+ SL+ G + G +Y M G P + + +VD +
Sbjct: 415 GQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM-IKMGYPPDVVIYGVLVDGLSK 473
Query: 500 CGMVKEALSIILKMV 514
G++ A+ +KM+
Sbjct: 474 QGLMLHAMRFSVKML 488
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 155/370 (41%), Gaps = 58/370 (15%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHCV--AIQM---GLD 76
G S + ++ M +MG P D + V+ LS G M H + +++M +
Sbjct: 440 GNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQ------GLMLHAMRFSVKMLGQSIR 493
Query: 77 LDLYFCNTMIDFYVKCWCIGCARRVFDLM----LHRDVVSWTSMIAGYISERHVSVACDL 132
L++ N++ID + + A +VF LM + DV ++T++
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV---------------- 537
Query: 133 FNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADK 192
MRV +M A C +G Q+ ++ + D +V N V+ +
Sbjct: 538 ---MRVS---------IMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 585
Query: 193 GSTEEVELLFSEI----NKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIET 248
E+ F+ + + D+ ++N +I Y + + A I E+ + N T
Sbjct: 586 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE-AERIFELLKVTPFGPNTVT 644
Query: 249 LTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VLQTSLLDFYAKCGKLDISVQLFREIH 307
LT++I K ++ + ++ + G + V L+D+++K ++ S +LF E+
Sbjct: 645 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 704
Query: 308 FK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
K S ++ ++ G + G EA +F QA D ++P++ + A G K
Sbjct: 705 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFH--QAIDAKLLPDV---VAYAILIRGYCK 759
Query: 364 LGRVVHGYLM 373
+GR+V L+
Sbjct: 760 VGRLVEAALL 769
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 125/588 (21%), Positives = 231/588 (39%), Gaps = 126/588 (21%)
Query: 71 IQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLM----LHRDVVSWTSMIAGYISERHV 126
++ GLD D + ++I Y + + A +VF+ M R+ V++T +I G R +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 127 SVACDLFNKMRVE------------------------------------LEPNSVTLIVM 150
A DLF KM+ + ++PN T V+
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 151 LQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEE----VELLFSEIN 206
+ + C+ ++ G ++ G++ + N+++ Y +G E+ VEL+ S
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 207 KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSW-NIETLTLVISAFAKCGNLSKG 265
+ ++N LI Y ++ + G++N+M LE ++ T +I + GN
Sbjct: 425 SPNTRTYNELIKGYCK-SNVHKAMGVLNKM--LERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 266 EGVHCLVIKTGFSDD------------------------------------VLQTSLLDF 289
+ L+ G D V+ T+L+D
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 290 YAKCGKLDISVQLFREIHFKS----YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIV 345
Y K GK+D + + ++ K+ +T A++ G +G EA L ++M + +
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK--IGLQ 599
Query: 346 PEIWRNLLDACANLGALKLGRVVHGY-LMKNLFNGPVEGNLHMETSILNMYIRGGNISSA 404
P + D LK G H Y + + + + + H T+ + Y R G + A
Sbjct: 600 PTVST---DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 405 RAVFDRMP----VKDVIAWTSMIEGFGSHG---FGFEALKYFNLMMEHRMQPNSVTFLSL 457
+ +M D+ ++S+I+G+G G F F+ LK M + +P+ TFLSL
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR---MRDTGCEPSQHTFLSL 713
Query: 458 LSACSHSGLVSEGCKIYYSMKWG--FGIEPALDHHTCMVDLFGRCGMVKEALSIILKMVI 515
+ K MK+G G EP L + M++ V E L +++ +
Sbjct: 714 I-------------KHLLEMKYGKQKGSEPELCAMSNMMEF----DTVVELLEKMVEHSV 756
Query: 516 LPDSRIWGALLAASGVYGNKTLGEYT---AQRLLELEPDNAGYHTLLS 560
P+++ + L+ GN + E QR + P ++ LLS
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLS 804
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 176/415 (42%), Gaps = 57/415 (13%)
Query: 142 PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELL 201
PN T M+ C + Q V++G+ D+ S++ Y + + +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 202 FSEIN----KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFA 257
F+E+ +R+ ++ LI + + L +M+ E + T T++I +
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP-TVRTYTVLIKSL- 333
Query: 258 KCGNLSKGEGVHCL--VIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREIHFK----S 310
CG+ K E ++ + + +TG ++ T L+D K + + +L ++ K +
Sbjct: 334 -CGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPN 392
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHG 370
IT A+++G+ + G +A+ + + M++ L + L + G
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL---------------IKG 437
Query: 371 YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHG 430
Y + N+H +LN + +R + DV+ + S+I+G G
Sbjct: 438 Y---------CKSNVHKAMGVLN------------KMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 431 FGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHH 490
A + +LM + + P+ T+ S++ + S V E C ++ S++ G+ P + +
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK-GVNPNVVMY 535
Query: 491 TCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGAL---LAASGVYGNKTLGE 539
T ++D + + G V EA ++ KM+ LP+S + AL L A G TL E
Sbjct: 536 TALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/491 (20%), Positives = 211/491 (42%), Gaps = 34/491 (6%)
Query: 11 WNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVV-----NRALSSMRADAVYGKM 65
+N + + +F +S +KM+++ + H +T+ ++ R+ S+ A A+ GKM
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISL-ALALLGKM 146
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLML----HRDVVSWTSMIAGYI 121
+++G + + +++++ Y I A + D M+ D +++T++I G
Sbjct: 147 -----MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 201
Query: 122 SERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
S A L ++M + +PN VT V++ C ++ + + + D
Sbjct: 202 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV 261
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEM 236
+ N+++ ++ LF E+ + +V +++ LIS G + L+++M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGK 295
+ + N+ T +I AF K G + E ++ +IK D+ SL++ + +
Sbjct: 322 IE-KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 296 LDISVQLFR----EIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRN 351
LD + Q+F + F +T ++ GF ++ + LF++M LV +
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 352 LLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM 411
L+ + G + V K + + V ++ + +L+ G + A VFD M
Sbjct: 441 LIQGLFHDGDCDNAQKV----FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 496
Query: 412 PVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
D+ +T+MIEG G + F + ++PN VT+ +++S L+
Sbjct: 497 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 556
Query: 468 SEGCKIYYSMK 478
E + MK
Sbjct: 557 QEAYALLKKMK 567
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 141/335 (42%), Gaps = 30/335 (8%)
Query: 210 VASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVH 269
+ +N L+S + + V L +MQ LE + T ++I+ F + +S +
Sbjct: 85 IVEFNKLLSAIAKMKKFDVVISLGEKMQRLE-IVHGLYTYNILINCFCRRSQISLALALL 143
Query: 270 CLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQN 324
++K G+ ++ +SLL+ Y ++ +V L ++ Y IT ++ G +
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203
Query: 325 GSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY--LMKNLFN---- 378
EA+AL +M + R G + G G L NL N
Sbjct: 204 NKASEAVALVDRM----------VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Query: 379 GPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFE 434
+E ++ + +I++ + ++ A +F M K +V+ ++S+I S+G +
Sbjct: 254 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 313
Query: 435 ALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMV 494
A + + M+E ++ PN VTF +L+ A G E K+Y M I+P + + +V
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM-IKRSIDPDIFTYNSLV 372
Query: 495 DLF---GRCGMVKEALSIILKMVILPDSRIWGALL 526
+ F R K+ ++ PD + L+
Sbjct: 373 NGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLI 407
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 111/265 (41%), Gaps = 13/265 (4%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTF-PVVNRALSSMRADAVYGKM 65
N + +N I V G+F A + M + + D FT+ +VN R D
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYI 121
V+ D+ Y NT+I + K + +F M HR D V++T++I G
Sbjct: 389 EFMVSKDCFPDVVTY--NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ A +F +M + + P+ +T ++L C + L ++ Y KS + +D
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 181 VKNSVLRMYADKGSTEEVELLFSEIN----KRDVASWNILISFYSMVGDMMRVAGLINEM 236
+ +++ G ++ LF ++ K +V ++N +IS + L+ +M
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 237 QSLEGHSWNIETLTLVISAFAKCGN 261
+ +G N T +I A + G+
Sbjct: 567 KE-DGPLPNSGTYNTLIRAHLRDGD 590
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/420 (19%), Positives = 176/420 (41%), Gaps = 50/420 (11%)
Query: 212 SWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCL 271
++NILI+ + + L+ +M L G+ +I TL+ +++ + +S +
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKL-GYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 180
Query: 272 VIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGS 326
+++ G+ D + T+L+ K +V L + + + +T G +++G + G
Sbjct: 181 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGD 240
Query: 327 FMEAIALFQQMQAE----DLVIVPEIWRNL-----LDACANL------GALKLGRVVHG- 370
A+ L +M+A D+VI I +L +D NL ++ V +
Sbjct: 241 TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSS 300
Query: 371 ---------------YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK- 414
L+ ++ + NL ++++ +++ G A ++D M +
Sbjct: 301 LISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS 360
Query: 415 ---DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
D+ + S++ GF H +A + F M+ P+ VT+ +L+ S V +G
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLF--GRCGMVKEALSIILKMVILPDSRIWGALLAAS 529
+++ M + + + T + LF G C ++ ++ + PD + LL
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL--D 478
Query: 530 GVYGN----KTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLK 585
G+ N K L + + E++ D Y T++ + AG+ ++ +L +S K +K
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGM-CKAGKVDDGWDLFCSLSLKGVK 537
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 123/562 (21%), Positives = 222/562 (39%), Gaps = 74/562 (13%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N + +N I + LG +A FK+++ G TF + D V
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK-EGDFVASDRL 297
Query: 67 HCVAIQMGLDLDLYFCNTMIDF-YVKCWCIGCARRVFDLMLHR---DVVSWTSMIAGYIS 122
+ GL + ++F N +ID Y + + A + ++ + DV ++ +I
Sbjct: 298 LSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCK 357
Query: 123 ERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS- 180
E VA ++ + L PN+++ ++QA C S ++ +++ + G D
Sbjct: 358 EGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVT 417
Query: 181 ----VKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEM 236
+ V+ + D +V+L+ ++ D A +N+L+S G + L +EM
Sbjct: 418 YGILIHGLVVSGHMDDAVNMKVKLIDRGVSP-DAAIYNMLMSGLCKTGRFLPAKLLFSEM 476
Query: 237 --QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCG 294
+++ ++ TL I F + G+ + V L ++ G DV+ +
Sbjct: 477 LDRNILPDAYVYATL---IDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHN--------- 524
Query: 295 KLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
AM+ GF ++G EA+A +M E LV + ++D
Sbjct: 525 ---------------------AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIID 563
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
+ + Y+ KN + N+ TS++N + G+ A F M ++
Sbjct: 564 GYVKQQDMATAIKIFRYMEKN----KCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLR 619
Query: 415 D----VIAWTSMIEGFGSHGFGFE-ALKYFNLMMEHRMQPNSVTFLSLLSAC-------- 461
D V+ +T++I E A+ Y+ LMM ++ PN VTF LL
Sbjct: 620 DLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKV 679
Query: 462 ------SHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV- 514
S+ G S + ++ MK + A +++ +V L GMVK A KMV
Sbjct: 680 LAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVH-GMVKTACMFQDKMVK 738
Query: 515 --ILPDSRIWGALLAASGVYGN 534
PD + A+L V GN
Sbjct: 739 KGFSPDPVSFAAILHGFCVVGN 760
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 107/522 (20%), Positives = 211/522 (40%), Gaps = 84/522 (16%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISERHVSVACDLFNKMR 137
D+ CN+++ VK +G AR+V+D M CD + +
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEM------------------------CDRGDSV- 203
Query: 138 VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEE 197
++ + ++++ C + VG ++ G + + N+++ Y G E
Sbjct: 204 -----DNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIEN 258
Query: 198 VELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVI 253
L+F E+ + + ++ +I+ + GD + L++E++ G ++ L +I
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKE-RGLRVSVWFLNNII 317
Query: 254 SAFAKCG-NLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISVQLFREIHFKSYI 312
A + G + E + ++ D L++ K GK +++V E
Sbjct: 318 DAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDE------- 370
Query: 313 TLGAMMSGFIQNG-SFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
A G I N S+ I + + + D I LL A G K V +G
Sbjct: 371 ---ASKKGLIPNNLSYAPLIQAYCKSKEYD------IASKLLLQMAERGC-KPDIVTYGI 420
Query: 372 LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTSMIEGFGSHGF 431
L+ L V G HM+ ++ NM ++ + DR D + ++ G G
Sbjct: 421 LIHGLV---VSG--HMDDAV-NMKVK---------LIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 432 GFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHT 491
A F+ M++ + P++ + +L+ SG E K++ S+ G++ + HH
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF-SLSVEKGVKVDVVHHN 524
Query: 492 CMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGALLAASGVYGNKTLGEYTAQRLL-- 546
M+ F R GM+ EAL+ + +M ++PD + ++ G + + TA ++
Sbjct: 525 AMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTII--DGYVKQQDMA--TAIKIFRY 580
Query: 547 ----ELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDL 584
+ +P+ Y +L++ G + EE +EM +DL
Sbjct: 581 MEKNKCKPNVVTYTSLINGF-CCQGDFKMAEETFKEMQLRDL 621
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/452 (20%), Positives = 189/452 (41%), Gaps = 29/452 (6%)
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYISERHVSVACDLF 133
D+ C T+I + + A ++ +++ DV+++ MI+GY ++ A +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL 195
Query: 134 NKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKG 193
++M V P+ VT +L++ C S L ++ ++ D ++
Sbjct: 196 DRMSVS--PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 194 STEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETL 249
L E+ R DV ++N+L++ G + +N+M S G N+ T
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPS-SGCQPNVITH 312
Query: 250 TLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLL-DFYAKCGKLDISVQLFREIHF 308
+++ + G E + +++ GFS V+ ++L +F + G L ++ + ++
Sbjct: 313 NIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQ 372
Query: 309 ----KSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI--WRNLLDACANLGAL 362
+ ++ ++ GF + AI ++M + P+I + +L A G
Sbjct: 373 HGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG--CYPDIVTYNTMLTALCKDG-- 428
Query: 363 KLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDV----IA 418
K+ V ++ L + L ++++ + G A + D M KD+ I
Sbjct: 429 KVEDAVE--ILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486
Query: 419 WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
++S++ G G EA+K+F+ ++PN+VTF S++ S M
Sbjct: 487 YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM- 545
Query: 479 WGFGIEPALDHHTCMVDLFGRCGMVKEALSII 510
G +P +T +++ GM KEAL ++
Sbjct: 546 INRGCKPNETSYTILIEGLAYEGMAKEALELL 577
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 20/336 (5%)
Query: 183 NSVLRMYADKGSTEEVELLFSEINK----RDVASWNILISFYSMVGDMMRVAGLINEMQS 238
NS++ Y G + + F + K V S NILI+ +VG + L ++M
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLD 297
G + T ++ F G +S V ++ G S DV+ T LL + G +D
Sbjct: 286 -HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 298 ISVQLFREI-----HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL 352
+ + L +++ S I M+SG + G EA++LF QM+A+ L + +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM- 411
+ LG + +L + + + N ++L + G + AR++ D +
Sbjct: 405 IHGLCKLGKFDMAL----WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 412 ---PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
D++ + +I+G+ G EAL+ F +++E + P+ TF SL+ + ++
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVK 504
E KI +K +G+ P++ +T ++D + CG K
Sbjct: 521 EARKILDVIKL-YGLAPSVVSYTTLMDAYANCGNTK 555
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 201/460 (43%), Gaps = 47/460 (10%)
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
NSVL + + T+++ ++ EI ++ +++ ++V + R L + + L
Sbjct: 163 NSVLYHFRE---TDKMWDVYKEIKDKNEHTYS------TVVDGLCRQQKLEDAVLFLRTS 213
Query: 243 SW-----NIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-----FSDDVLQTSLLDFYAK 292
W ++ + ++S + K G + + C V+K G +S ++L L +
Sbjct: 214 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 293 CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL 352
L+++ + + +T + GF G A + + M + L + L
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSI-LNMYIRGGNISSARAVFDRM 411
L LG + +G V L+K++ + E N + S+ L+ + G I A ++F++M
Sbjct: 334 LCGQCQLGNIDMGLV----LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 412 PVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
D++A++ +I G G AL ++ M + R+ PNS T +LL G++
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 468 SEGCKIYYSM-KWGFGIEPALDHHTCMVDLFGRCGMVKEAL---SIILKMVILPDSRIWG 523
E + S+ G ++ L + ++D + + G ++EAL ++++ I P +
Sbjct: 450 LEARSLLDSLISSGETLDIVL--YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 524 ALLAASGVYGN-KTLGEYTAQRLLE------LEPDNAGYHTLLSNVKASAGRWNEVEELR 576
+L +YG KT A+++L+ L P Y TL+ + A+ G ++ELR
Sbjct: 508 SL-----IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSIDELR 561
Query: 577 REMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIY 616
REM + + + KG+ G+ + H E I+
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 129/596 (21%), Positives = 249/596 (41%), Gaps = 78/596 (13%)
Query: 19 VDLGQFHSALSTFKKMRQMGVPHDTFTFP-VVNRALSSMRADA--VYGKMTHCVAIQMGL 75
V G+ AL + +M V D FT VVN S D V+ K T +GL
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETES---SLGL 257
Query: 76 DLDLYFCNTMIDFYVKCWCIGCARRVFDLM----LHRDVVSWTSMIAGYISERHVSVACD 131
+L++ N++I+ Y + RV LM + R+VV++TS+I GY + + A
Sbjct: 258 ELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEH 317
Query: 132 LFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYA 190
+F ++ +L + V++ C + + ++H ++ GV + ++ NS++ Y
Sbjct: 318 VFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYC 377
Query: 191 DKGSTEEVELLFSEIN----KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNI 246
G E E +FS +N K D ++N L+ Y G + L ++M E +
Sbjct: 378 KSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVP-TV 436
Query: 247 ETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFRE 305
T +++ +++ G + +++K G +D++ ++LL+ K G + +++L+
Sbjct: 437 MTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWEN 496
Query: 306 IHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGA 361
+ + ITL M+SG + EA + +LD N+
Sbjct: 497 VLARGLLTDTITLNVMISGLCKMEKVNEA-------------------KEILD---NVNI 534
Query: 362 LKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIAWTS 421
+ V Y ++ + Y + GN+ A AV + M K +
Sbjct: 535 FRCKPAVQTY-----------------QALSHGYYKVGNLKEAFAVKEYMERKGIFPTIE 577
Query: 422 MIEGFGSHGFGFEAL-KYFNLMMEHR---MQPNSVTFLSLLSACSHSGLVSEGCKIYYSM 477
M S F + L K +L++E R + P T+ +L++ + G++ + + M
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 478 KWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV----ILPDSRIWGALLAASGVYG 533
GI ++ + + + R + EA ++ K+V +LP + L AS
Sbjct: 638 IEK-GITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTC 696
Query: 534 NKT------LGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKD 583
KT + T ++L L P+N Y+ ++ + AG+ + +L ++ D
Sbjct: 697 LKTQKIAESVENSTPKKL--LVPNNIVYNVAIAGL-CKAGKLEDARKLFSDLLSSD 749
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 150/336 (44%), Gaps = 20/336 (5%)
Query: 183 NSVLRMYADKGSTEEVELLFSEINK----RDVASWNILISFYSMVGDMMRVAGLINEMQS 238
NS++ Y G + + F + K V S NILI+ +VG + L ++M
Sbjct: 226 NSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 285
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLD 297
G + T ++ F G +S V ++ G S DV+ T LL + G +D
Sbjct: 286 -HGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 298 ISVQLFREI-----HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL 352
+ + L +++ S I M+SG + G EA++LF QM+A+ L + +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM- 411
+ LG + +L + + + N ++L + G + AR++ D +
Sbjct: 405 IHGLCKLGKFDMAL----WLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLI 460
Query: 412 ---PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVS 468
D++ + +I+G+ G EAL+ F +++E + P+ TF SL+ + ++
Sbjct: 461 SSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIA 520
Query: 469 EGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVK 504
E KI +K +G+ P++ +T ++D + CG K
Sbjct: 521 EARKILDVIKL-YGLAPSVVSYTTLMDAYANCGNTK 555
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 100/460 (21%), Positives = 201/460 (43%), Gaps = 47/460 (10%)
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGH 242
NSVL + + T+++ ++ EI ++ +++ ++V + R L + + L
Sbjct: 163 NSVLYHFRE---TDKMWDVYKEIKDKNEHTYS------TVVDGLCRQQKLEDAVLFLRTS 213
Query: 243 SW-----NIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-----FSDDVLQTSLLDFYAK 292
W ++ + ++S + K G + + C V+K G +S ++L L +
Sbjct: 214 EWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSI 273
Query: 293 CGKLDISVQLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNL 352
L+++ + + +T + GF G A + + M + L + L
Sbjct: 274 AEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 353 LDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSI-LNMYIRGGNISSARAVFDRM 411
L LG + +G V L+K++ + E N + S+ L+ + G I A ++F++M
Sbjct: 334 LCGQCQLGNIDMGLV----LLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQM 389
Query: 412 PVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLV 467
D++A++ +I G G AL ++ M + R+ PNS T +LL G++
Sbjct: 390 KADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML 449
Query: 468 SEGCKIYYSM-KWGFGIEPALDHHTCMVDLFGRCGMVKEAL---SIILKMVILPDSRIWG 523
E + S+ G ++ L + ++D + + G ++EAL ++++ I P +
Sbjct: 450 LEARSLLDSLISSGETLDIVL--YNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFN 507
Query: 524 ALLAASGVYGN-KTLGEYTAQRLLE------LEPDNAGYHTLLSNVKASAGRWNEVEELR 576
+L +YG KT A+++L+ L P Y TL+ + A+ G ++ELR
Sbjct: 508 SL-----IYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLM-DAYANCGNTKSIDELR 561
Query: 577 REMSEKDLKKKPGWSCIEVKGVSYGFLSGDITHPEAEEIY 616
REM + + + KG+ G+ + H E I+
Sbjct: 562 REMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 171/388 (44%), Gaps = 32/388 (8%)
Query: 109 DVVSWTSMIAGYISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIH 167
+VV++++ I + + +A F+ M R L PN VT ++ C + L V ++
Sbjct: 162 NVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLY 221
Query: 168 GYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVAS----WNILISFYSMV 223
+ + ++ +++ + KG + E ++S + + V + +I +
Sbjct: 222 KEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQR 281
Query: 224 GDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-VL 282
GD + +M + +G +I ++IS G L + + + K+ D V+
Sbjct: 282 GDSDNAMKFLAKMLN-QGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340
Query: 283 QTSLLDFYAKCGKLDISVQLFREIHFKSY----ITLGAMMSGFIQNGSFMEAIALFQQMQ 338
T++++ Y K G++ +V ++ ++ + + + L M+ G +NG EAI F +
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEK 400
Query: 339 AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNL----HMETSILNM 394
A D+ ++ L+DA K G + ++ LF+ E L M TS +
Sbjct: 401 ANDV-----MYTVLIDALC-----KEGDFIE---VERLFSKISEAGLVPDKFMYTSWIAG 447
Query: 395 YIRGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPN 450
+ GN+ A + RM + D++A+T++I G S G EA + F+ M+ + P+
Sbjct: 448 LCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPD 507
Query: 451 SVTFLSLLSACSHSGLVSEGCKIYYSMK 478
S F L+ A G ++ + M+
Sbjct: 508 SAVFDLLIRAYEKEGNMAAASDLLLDMQ 535
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 194/475 (40%), Gaps = 57/475 (12%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMTHC 68
+ W + I G+ A+ K+M+ MG+ D + + R + GK
Sbjct: 213 VTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC-GELDRGKALFD 271
Query: 69 VAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYISER 124
++ G NT+I + K + A +F+ M+ R +V ++T +I G
Sbjct: 272 EVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVG 331
Query: 125 HVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKN 183
A L N M + EPN+VT +++ C K G++ D
Sbjct: 332 KTKEALQLLNLMIEKDEEPNAVTYNIIINKLC----------------KDGLVAD----- 370
Query: 184 SVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHS 243
+ E VEL+ + D ++NIL+ GD+ + L+ M L+ S
Sbjct: 371 ----------AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM--LKDSS 418
Query: 244 W---NIETLTLVISAFAKCGNLSKGEGVHCLVI-KTGFSDDVLQTSLLDFYAKCGKLDIS 299
+ ++ + +I K L + ++ L++ K G D V LL+ K G ++ +
Sbjct: 419 YTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKA 478
Query: 300 VQLFREIHFKSYI----TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDA 355
++L+++I + T AM+ GF + G A L +M+ +L + LL +
Sbjct: 479 MELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSS 538
Query: 356 CANLGALKLG-RVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP-- 412
G+L R+ N F V N+ ++ S ++ G+I SA ++ M
Sbjct: 539 LCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGS-----LKAGDIKSAESLLVGMSRA 593
Query: 413 --VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSG 465
D+ ++ +I F G+ EA+ +F+ M++ +P++ S+L C G
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 164/396 (41%), Gaps = 50/396 (12%)
Query: 113 WTSMIAGYISERHVSVACDLFNKMRVELEPN--SVTLIVMLQACCASTP-LNVGTQIHGY 169
WTS A I R V L N N S T + C S P L +
Sbjct: 4 WTSAAAAEILRRDEHVVRKLLNPRVYSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQ 63
Query: 170 AVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDM--- 226
AV SG + ++ N + ++ + EL FS R + + I+F S+ G +
Sbjct: 64 AVDSGSSLAFAGNNLMAKLVRSRNH----ELAFSFY--RKMLETDTFINFVSLSGLLECY 117
Query: 227 --MRVAGLINEMQSL---EGHSWNIETLTLVISAFAKCGNLSKGEGVHCL--VIKTGFSD 279
MR G + +L G ++N+ +++ C NL G+ V L + +
Sbjct: 118 VQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGL--CRNLECGKAVSLLREMRRNSLMP 175
Query: 280 DVLQ-TSLLDFYAKCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALF 334
DV +++ + + +L+ +++L E+ S +T G ++ F + G EA+
Sbjct: 176 DVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFL 235
Query: 335 QQMQ----AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETS 390
++M+ DLV+ + R D G L G K LF+ +E
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDC----GELDRG--------KALFDEVLERGDSPCAI 283
Query: 391 ILNMYIRG----GNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLM 442
N IRG G + A +F+ M + +V +T +I+G G EAL+ NLM
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 443 MEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMK 478
+E +PN+VT+ +++ GLV++ +I MK
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 103/509 (20%), Positives = 211/509 (41%), Gaps = 30/509 (5%)
Query: 106 LHRDVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGT 164
L DV S+ ++I G+ + + A +L N+M+ + VT +++ A C + ++
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232
Query: 165 QIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSEINKRD----VASWNILISFY 220
G+ D V S++R + D G + + LF E+ +R ++N LI +
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292
Query: 221 SMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKG-EGVHCLVIKTGFSD 279
+G ++ A I E G N+ T T +I G + + ++ ++ K +
Sbjct: 293 CKLG-QLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 280 DVLQTSLLDFYAKCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALFQ 335
V +++ K G + +V++ + + IT ++ G G EA L
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 336 QMQAEDLVIVPEI--WRNLLDACANLGALKLGRVVHGYLMKNLFNGP-VEGNLHMETSIL 392
M + P++ + L+ L ++ L++ L G V N+ +L
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI-----LL 466
Query: 393 NMYIRGGNISSA----RAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQ 448
N ++ G+++ A + + D V++ +T+MI+GF G A M +Q
Sbjct: 467 NSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQ 526
Query: 449 PNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALS 508
P+ + LLS+ G + + +++ M+ P + M+D + G +K A S
Sbjct: 527 PSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF-PDVVSFNIMIDGSLKAGDIKSAES 585
Query: 509 IILKMV---ILPDSRIWGALLAASGVYG--NKTLGEYTAQRLLELEPDNAGYHTLLSNVK 563
+++ M + PD + L+ G ++ + + EPD ++L
Sbjct: 586 LLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC- 644
Query: 564 ASAGRWNEVEELRREMSEKDLKKKPGWSC 592
S G +++ EL +++ +KD+ +C
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTC 673
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/499 (20%), Positives = 214/499 (42%), Gaps = 65/499 (13%)
Query: 1 MEEE-PN-NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTF-TFPVVNRALSSMR 57
ME+E P+ N++ +++ I G+ AL +KKM +G+ F ++ L +
Sbjct: 365 MEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 58 ADAVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSW 113
+ + + GL +++ CNT++ + K A + M R +VVS+
Sbjct: 425 HEEALKLFDE--SFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSY 481
Query: 114 TSMIAGYISERHVSVACDLF-NKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVK 172
+++ G+ ++++ +A +F N + L+PN+ T +++ C + ++ +
Sbjct: 482 NNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541
Query: 173 SGVLMDWSVKNSVLRMYADKGSTEEV-ELLFSEINKRDVA----SWNILISFYSMVGDMM 227
S + ++ V +++ G T + ELL + I ++ + S+N +I + G+M
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Query: 228 RVAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSL 286
EM CGN G S +V+ TSL
Sbjct: 602 SAVAAYEEM----------------------CGN--------------GISPNVITYTSL 625
Query: 287 LDFYAKCGKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDL 342
++ K ++D ++++ E+ K GA++ GF + + A ALF ++ E L
Sbjct: 626 MNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGL 685
Query: 343 VIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNIS 402
I+ +L+ NLG + V L K + + +L T++++ ++ GN+
Sbjct: 686 NPSQPIYNSLISGFRNLGNM----VAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLI 741
Query: 403 SARAVFDRMP----VKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLL 458
A ++ M V D I +T ++ G G + +K F M ++ + PN + + +++
Sbjct: 742 LASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI 801
Query: 459 SACSHSGLVSEGCKIYYSM 477
+ G + E +++ M
Sbjct: 802 AGHYREGNLDEAFRLHDEM 820
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 121/609 (19%), Positives = 237/609 (38%), Gaps = 95/609 (15%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGV-PHDTFTFPVVNRALSSM--RADAVYG 63
N+ A+N + + Q A+ +M ++ V P FP VNR LS++ R
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPF----FPYVNRTLSALVQRNSLTEA 217
Query: 64 KMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDVVSWTSMIAGYISE 123
K + + +G+D D +V + M A E
Sbjct: 218 KELYSRMVAIGVDGD------------------------------NVTTQLLMRASLREE 247
Query: 124 RHVSVACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQI-HGYAVKSGVLMDWSVK 182
+ L + EP+S+ + +QACC + L + + K +
Sbjct: 248 KPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETY 307
Query: 183 NSVLRMYADKGSTEEV-----ELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQ 237
SV+ +G+ ++ E+L I+ VA+ + LI+ + D++ L ++M+
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATS-LITGHCKNNDLVSALVLFDKME 366
Query: 238 SLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQT-SLLDFYAKCGKL 296
EG S N T +++I F K G + K + + G + V +++ + K K
Sbjct: 367 K-EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKH 425
Query: 297 DISVQLFRE---IHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI--WRN 351
+ +++LF E + ++S + G EA L +M++ I P + + N
Sbjct: 426 EEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRG--IGPNVVSYNN 483
Query: 352 LLDACANLGALKLGRVV---------------HGYLMKNLFNGPVEGNL-----HMETS- 390
++ + L R+V + L+ F E N HM +S
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 391 ----------ILNMYIRGGNISSARAVFDRMPVK-----DVIAWTSMIEGFGSHGFGFEA 435
I+N + G S AR + M + +++ S+I+GF G A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 436 LKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVD 495
+ + M + + PN +T+ SL++ + + + ++ MK G++ + + ++D
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK-NKGVKLDIPAYGALID 662
Query: 496 LFGRCGMVKEA---LSIILKMVILPDSRIWGALLAASGVYGNKTLGEYTAQRLLE--LEP 550
F + ++ A S +L+ + P I+ +L++ GN +++L+ L
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 551 DNAGYHTLL 559
D Y TL+
Sbjct: 723 DLGTYTTLI 731
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 135/596 (22%), Positives = 236/596 (39%), Gaps = 134/596 (22%)
Query: 28 LSTFKKMRQMGVPHDTFTFPVVNRALSSMR----ADAVYGKMTHCVAIQMGLDLDLYFCN 83
L +F+KM + G +V + L R A AVY M I+ G+ + N
Sbjct: 188 LLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETM-----IEHGIMPTVITFN 242
Query: 84 TMIDFYVKCWCIGCARRVFDL---MLHRDV----VSWTSMIAGYISERHVSVACDLFNKM 136
TM+D C+ G RV + M R++ V++ +I G+ + A M
Sbjct: 243 TMLD---SCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299
Query: 137 RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD-WSVKNSVLR--MYA--- 190
R ++ A TP + I GY K G+ D W V + +L +Y
Sbjct: 300 R--------------RSGFAVTPYSFNPLIEGYC-KQGLFDDAWGVTDEMLNAGIYPTTS 344
Query: 191 ----------DKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
D G ++ L S + DV S+N L+ Y +G + + L +++++ +
Sbjct: 345 TYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGD 404
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCGKLDISV 300
H +I T +I + GNL EG L K +++
Sbjct: 405 IHP-SIVTYNTLIDGLCESGNL---EGAQRL-----------------------KEEMTT 437
Query: 301 QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLG 360
QL F IT ++ GF++NG+ A ++ +M + I P+ + A +G
Sbjct: 438 QLI----FPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG--IKPDGYAYTTRA---VG 488
Query: 361 ALKLGRVVHGYLMKNLFNGPVEGNLHM-ETSILNMYIRG----GNISSA----RAVFDRM 411
L+LG + L V + H + +I N+ I G GN+ A R +F
Sbjct: 489 ELRLGDSDKAF---RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVG 545
Query: 412 PVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGC 471
V D + +T++I G+ +G A ++ M+ R+ P+ +T+ L+ + +G + +
Sbjct: 546 LVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAF 605
Query: 472 KIYYSMKWGFGIEPALDHHTCMVDLFGRC--GMVKEALSIILKMVILPDSRIWGALLAAS 529
+ MK G+ P + H + L+G C G + EA + KM
Sbjct: 606 QYSTEMK-KRGVRPNVMTHNAL--LYGMCKAGNIDEAYRYLCKM-------------EEE 649
Query: 530 GVYGNKTLGEYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLK 585
G+ P N +T+L + +W EV +L +EM +K+++
Sbjct: 650 GI------------------PPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIE 687
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 140/345 (40%), Gaps = 21/345 (6%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTF-PVVNRALSSMRADAVYGKMTH 67
+ +N+ I G+ A MR+ G ++F P++ D +G
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWG---- 329
Query: 68 CVAIQMGLDLDLYFCNTMIDFYVKCWC----IGCARRVFDLMLHRDVVSWTSMIAGYISE 123
V +M L+ +Y + + Y+ C I AR + M DVVS+ +++ GYI
Sbjct: 330 -VTDEM-LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKM 387
Query: 124 RHVSVACDLFNKMRV-ELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVK 182
A LF+ +R ++ P+ VT ++ C S L ++ + D
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 183 NSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSM----VGDMMRVAGLINEMQS 238
++++ + G+ ++ E+ ++ + + ++ +GD + L EM +
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 239 LEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLD 297
+ H+ ++ + I K GNL K + + G D V T+++ Y + G+
Sbjct: 508 TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 298 ISVQLFREI----HFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ 338
++ L+ E+ + S IT ++ G + G +A +M+
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 158/400 (39%), Gaps = 70/400 (17%)
Query: 143 NSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLF 202
N + + + C++ + + G + D S + VL + E LLF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 203 SEINK----RDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAFAK 258
E+ + DV ++ I++ + G + + NEM+ + G + N+ T T +I A+ K
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV-GCTPNVVTYTALIHAYLK 565
Query: 259 CGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLDISVQLFR-----------EI 306
+S + ++ G + V ++L+D + K G+++ + Q+F ++
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 307 HFKSY---------ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACA 357
+FK Y +T GA++ GF ++ EA L M E ++ L+D
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 358 NLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM----PV 413
+G L + V + ++ F L+ +S+++ Y + A V +M
Sbjct: 686 KVGKLDEAQEVKTEMSEHGF----PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 414 KDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKI 473
+V+ +T MI+G G EA K +M E QPN VT+
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY------------------- 782
Query: 474 YYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
T M+D FG G ++ L ++ +M
Sbjct: 783 -----------------TAMIDGFGMIGKIETCLELLERM 805
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 137/330 (41%), Gaps = 29/330 (8%)
Query: 22 GQFHSALSTFKKMRQMGVPHDTFTF-PVVNRALSSMRADAVYGKMTHCVAIQMGLDLDLY 80
G++ A S ++M G DT T+ V+N ++ + + + + GL D+Y
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEE--MKRGGLVADVY 519
Query: 81 FCNTMIDFYVKCWCIGCARRVFDLMLH----RDVVSWTSMIAGYISERHVSVACDLFNKM 136
M+D + K I AR+ F+ M +VV++T++I Y+ + VS A +LF M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 137 RVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGST 195
E PN VT ++ C + + QI S + D + + Y D
Sbjct: 580 LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM---YFKQYDDNS-- 634
Query: 196 EEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISA 255
+ +V ++ L+ + + L++ M S+EG N +I
Sbjct: 635 ----------ERPNVVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDG 683
Query: 256 FAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKS---- 310
K G L + + V + + GF + +SL+D Y K + D++ ++ ++ S
Sbjct: 684 LCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPN 743
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAE 340
+ M+ G + G EA L Q M+ +
Sbjct: 744 VVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 110/530 (20%), Positives = 202/530 (38%), Gaps = 61/530 (11%)
Query: 12 NLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRA-LSSMRADAVYGKMTHCVA 70
N+ +R H G F AL +++ T+ + +A L + R D+ + H
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDS--ASLIH--- 258
Query: 71 IQMGLDLDLYFCNTMID-FYVKCWC-----IGCARRVFDLM----LHRDVVSWTSMIAGY 120
++ N +D F ++C+ +G R L+ D V +T +I+G
Sbjct: 259 ------REMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGL 312
Query: 121 ISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
A D N+MR PN VT +L C L ++ + G
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSP 372
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINK----RDVASWNILISFYSMVGDMMRV-AGLIN 234
+ NS++ Y G L ++ K +NILI S+ GD + L++
Sbjct: 373 KIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIG--SICGDKDSLNCDLLD 430
Query: 235 --EMQSLEGHSWNIETLTLVISAFAKC----GNLSKGEGVHCLVIKTGF-SDDVLQTSLL 287
E E + + + +S+F +C G K V +I GF D + +L
Sbjct: 431 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 490
Query: 288 DFYAKCGKLDISVQLFREIHFKSYI----TLGAMMSGFIQNGSFMEAIALFQQMQAEDLV 343
++ K++++ LF E+ + T M+ F + G +A F +M+ ++
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR--EVG 548
Query: 344 IVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISS 403
P + A L A K+ L + + + N+ +++++ + + G +
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYA--NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 404 ARAVFDRMPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSH 463
A +F+RM + M YF ++ +PN VT+ +LL
Sbjct: 607 ACQIFERMCGSKDVPDVDM---------------YFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 464 SGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
S V E K+ +M G EP + ++D + G + EA + +M
Sbjct: 652 SHRVEEARKLLDAMSME-GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 389 TSILNMYIRGGNISSARAVFDRMP----VKDVIAWTSMIEGFGSHGFGFEALKYFNLMME 444
+ +LN + A +F+ M V DV +T M++ F G +A K+FN M E
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 445 HRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVK 504
PN VT+ +L+ A + VS +++ +M G P + ++ ++D + G V+
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETM-LSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 505 EALSIILKMV-------------------ILPDSRIWGALLAASGVYGNKTLGEYTAQRL 545
+A I +M P+ +GALL G + + E A++L
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALL--DGFCKSHRVEE--ARKL 661
Query: 546 LE------LEPDNAGYHTLLSNVKASAGRWNEVEELRREMSE 581
L+ EP+ Y L+ + G+ +E +E++ EMSE
Sbjct: 662 LDAMSMEGCEPNQIVYDALIDGL-CKVGKLDEAQEVKTEMSE 702
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 166/386 (43%), Gaps = 25/386 (6%)
Query: 140 LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVE 199
+EP T ++ ++ ++ ++ + D N++++ Y G T++
Sbjct: 218 IEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAM 277
Query: 200 LLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISA 255
++ R D ++ +I D L EM +G +LVI
Sbjct: 278 EKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDE-KGIQVPPHAFSLVIGG 336
Query: 256 FAKCGNLSKGEGVHCLVIKTGFSDDV-LQTSLLDFYAKCGKLDISVQLFREI---HFK-S 310
K G L++G V +I+ G +V + T L+D YAK G ++ +++L + FK
Sbjct: 337 LCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPD 396
Query: 311 YITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHG 370
+T +++G +NG EA+ F + + L I + +L+D G K GRV
Sbjct: 397 VVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLID-----GLGKAGRVDEA 451
Query: 371 -YLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD-----VIAWTSMIE 424
L + + + + ++++ + + + A A+F RM ++ V +T ++
Sbjct: 452 ERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLS 511
Query: 425 GFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSM-KWGFGI 483
G EALK +++M++ + P + F +L + SG V+ CKI + G +
Sbjct: 512 GMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVIL 571
Query: 484 EPALDHHTCMVDLFGRCGMVKEALSI 509
+ A + M++ + G +KEA +
Sbjct: 572 DAACED---MINTLCKAGRIKEACKL 594
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 147/354 (41%), Gaps = 53/354 (14%)
Query: 3 EEPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVY 62
E P A N I++ LG L ++KM++ G+ +T+
Sbjct: 182 EFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTY---------------- 225
Query: 63 GKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLM----LHRDVVSWTSMIA 118
N +++ V + A RVF++M + D+V++ +MI
Sbjct: 226 --------------------NFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIK 265
Query: 119 GYISERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLM 177
GY A + M E + +T + M+QAC A + ++ + G+ +
Sbjct: 266 GYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQV 325
Query: 178 DWSVKNSVLRMYADKGSTEEVELLFSEI----NKRDVASWNILISFYSMVGDMMRVAGLI 233
+ V+ +G E +F + +K +VA + +LI Y+ G + L+
Sbjct: 326 PPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLL 385
Query: 234 NEMQSLEGHSWNIETLTLVISAFAKCGNLSKG-EGVHCLVIKTGFSDDVLQTSLLDFYAK 292
+ M EG ++ T ++V++ K G + + + H + + +SL+D K
Sbjct: 386 HRMID-EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGK 444
Query: 293 CGKLDISVQLFREIHFK-----SYITLGAMMSGFIQNGSFMEAIALFQQMQAED 341
G++D + +LF E+ K SY A++ F ++ EAIALF++M+ E+
Sbjct: 445 AGRVDEAERLFEEMSEKGCTRDSY-CYNALIDAFTKHRKVDEAIALFKRMEEEE 497
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 200/497 (40%), Gaps = 67/497 (13%)
Query: 15 IRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSS-----MRADAVYGKMTHCV 69
I + +G A+ +F +M++ D FT+ V+ R + M A AVY +M C
Sbjct: 134 ISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC- 192
Query: 70 AIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHRDV----VSWTSMIAGYISERH 125
+LY ++D K A+++FD M R + V++T +I+G
Sbjct: 193 ----NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGS 248
Query: 126 VSVACDLFNKMRVELE-PNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNS 184
A LF +M+ P+SV +L C + ++ K G ++ +S
Sbjct: 249 ADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSS 308
Query: 185 VLR-MYADKGSTEEVELLFSEINKR---DVASWNILISFYSMVGDMMRVAGLINEMQSLE 240
++ ++ + T+ EL + + K D+ + ILI S G + L++ M S +
Sbjct: 309 LIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPS-K 367
Query: 241 GHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKT-GFSDDVLQTSLLDFYAKCGKLDIS 299
G S + VI A G L +G + + +T F D T L+ + G + +
Sbjct: 368 GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREA 427
Query: 300 VQLFREIH----FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDA 355
++F EI S T A++ G ++G EA L +M+
Sbjct: 428 EEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME----------------- 470
Query: 356 CANLGALKLGRVVHGYLMKNLFNGPVEGNLHMET-----SILNMYIRGGNISSARAVFDR 410
+GR +L + GN +T SIL Y + + D
Sbjct: 471 --------VGRPASLFLRLS-----HSGNRSFDTMVESGSILKAYRDLAHFA------DT 511
Query: 411 MPVKDVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
D++++ +I GF G ALK N++ + P+SVT+ +L++ G E
Sbjct: 512 GSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEA 571
Query: 471 CKIYYSMKWGFGIEPAL 487
K++Y+ K F PA+
Sbjct: 572 FKLFYA-KDDFRHSPAV 587
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 149/363 (41%), Gaps = 34/363 (9%)
Query: 174 GVLMDWSVKNSVLRMYADKGSTEEVELLFSEIN----KRDVASWNILISFYSMVGDMMR- 228
GV +D ++ YA G E+ F + + DV ++N+++ MMR
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRV------MMRE 175
Query: 229 ------VAGLINEMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDD-V 281
+ NEM S N+ T +++ K G S + + + G S + V
Sbjct: 176 EVFFMLAFAVYNEMLKC-NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRV 234
Query: 282 LQTSLLDFYAKCGKLDISVQLFREIH----FKSYITLGAMMSGFIQNGSFMEAIALFQQM 337
T L+ + G D + +LF E+ + + A++ GF + G +EA L +
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 338 QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY-LMKNLFNGPVEGNLHMETSILNMYI 396
+ + V+ + +L+D G + R + L N+ ++ ++ + T ++
Sbjct: 295 EKDGFVLGLRGYSSLID-----GLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLS 349
Query: 397 RGGNISSARAVFDRMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSV 452
+ G I A + MP K D + ++I+ G E M E P++
Sbjct: 350 KAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDAC 409
Query: 453 TFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILK 512
T L+ + +GLV E +I+ ++ G P++ ++D + G +KEA ++ K
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKS-GCSPSVATFNALIDGLCKSGELKEARLLLHK 468
Query: 513 MVI 515
M +
Sbjct: 469 MEV 471
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 130/285 (45%), Gaps = 13/285 (4%)
Query: 304 REIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALK 363
R + + A+ S I G EAI F +M+ + LL A LG K
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLG--K 242
Query: 364 LGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMP----VKDVIAW 419
V + K++ + +++ + G++ +AR +F+ M V D + +
Sbjct: 243 TDDVKRFF--KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTY 300
Query: 420 TSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKW 479
SMI+GFG G + + +F M + +P+ +T+ +L++ G + G + Y MK
Sbjct: 301 NSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMK- 359
Query: 480 GFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGALLAASGVYGNKT 536
G G++P + ++ +VD F + GM+++A+ + M ++P+ + +L+ A+ GN +
Sbjct: 360 GNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 537 LGEYTAQRLLELEPD-NAGYHTLLSNVKASAGRWNEVEELRREMS 580
+L++ + N +T L + A R E EEL +M
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 107/511 (20%), Positives = 213/511 (41%), Gaps = 55/511 (10%)
Query: 19 VDLGQFHSALSTFKKMRQMGV-PHDTFTFPVVNRALSSMRADAVYGKMTHCVAIQMGLDL 77
+DLG A+ F KM++ V P +++R + D V K I G
Sbjct: 203 IDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV--KRFFKDMIGAGARP 260
Query: 78 DLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYISERHVSVACDLF 133
++ N MID K + AR +F+ M R D V++ SMI G+ + F
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 134 NKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADK 192
+M+ + EP+ +T ++ C L +G + + +G+ + ++++ + +
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 193 GSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLV 252
G ++ I FY DM RV + NE T T +
Sbjct: 381 GMMQQA------------------IKFYV---DMRRVGLVPNEY-----------TYTSL 408
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREIHFKSY 311
I A K GNLS + +++ G +V+ T+L+D ++ + +LF ++
Sbjct: 409 IDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGV 468
Query: 312 I----TLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRV 367
I + A++ GF++ + A+ L +++ + ++ + +L ++ +V
Sbjct: 469 IPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKV 528
Query: 368 VHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKD----VIAWTSMI 423
V M + ++ N + T++++ Y + GN + + D M D V+ + +I
Sbjct: 529 V----MNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 424 EGFGSHGFGFEALKYFN-LMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFG 482
+G + +A+ YFN + + +Q N+ F +++ V ++ M G
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQK-G 643
Query: 483 IEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
+ P +T ++D + G V EAL++ KM
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 169/421 (40%), Gaps = 43/421 (10%)
Query: 141 EPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVEL 200
P T +M+ C + + G++ D NS++ + G ++
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 201 LFSEIN----KRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVISAF 256
F E+ + DV ++N LI+ + G + EM+ G N+ + + ++ AF
Sbjct: 319 FFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG-NGLKPNVVSYSTLVDAF 377
Query: 257 AKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGKLDISVQLFREIHFK----SY 311
K G + + + + + G ++ TSL+D K G L + +L E+ +
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 312 ITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRVVHGY 371
+T A++ G EA LF +M ++P + A+ AL +HG+
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAG--VIPNL--------ASYNAL-----IHGF 482
Query: 372 -----------LMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVKDVIA-- 418
L+ L ++ +L + + + I +A+ V + M + A
Sbjct: 483 VKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANS 542
Query: 419 --WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYS 476
+T++++ + G E L + M E ++ VTF L+ + LVS+ +
Sbjct: 543 LIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNR 602
Query: 477 MKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKMV---ILPDSRIWGALLAASGVYG 533
+ FG++ T M+D + V+ A ++ +MV ++PD + +L+ + G
Sbjct: 603 ISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Query: 534 N 534
N
Sbjct: 663 N 663
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 187/480 (38%), Gaps = 97/480 (20%)
Query: 10 AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRAD-AVYGKMTHC 68
+NL R+ G A F+ M+ GV + NR L + + A GK+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN-------NRLLGFLVSSFAEKGKLHFA 157
Query: 69 VAIQMGLDLDLYFC----NTMIDFYVKCWCIGCARRVFDLMLH----RDVVSWTSMIAGY 120
A+ + ++ C N++++ VK + A ++FD L D ++ +I G
Sbjct: 158 TALLLQ-SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 121 ISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
A +L M EP+ VT ++Q C S LN +++ VKSG
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK-DVKSG----- 270
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
+ DV ++ +IS Y G M + L+++M L
Sbjct: 271 ------------------------SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLDI 298
+ N+ T +++ +AK G + E + +I G F D V TSL+D Y + G++
Sbjct: 307 GIYPTNV-TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 299 SVQLFREIH----FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
+L+ E++ F + T +++ ++A L Q+ ++D++ P ++ ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
+ + G ++ A + + M K
Sbjct: 426 G---------------------------------------FCKAGKVNEANVIVEEMEKK 446
Query: 415 ----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
D I +T +I G G FEA+ F+ M+ P+ +T SLLS +G+ E
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 143/344 (41%), Gaps = 28/344 (8%)
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINK----RDVASWNILISFYSMVGDMMRVAGLINEM 236
V NS+L E+ LF E + D ++NILI VG + L+ M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF---SDDVLQTSLLDFYAKC 293
G +I T +I F K L+K + +K+G D V TS++ Y K
Sbjct: 233 SGF-GCEPDIVTYNTLIQGFCKSNELNKASEMF-KDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 294 GKLDISVQLFREIH----FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI- 348
GK+ + L ++ + + +T ++ G+ + G + A + +M + P++
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS--FGCFPDVV 348
Query: 349 -WRNLLDACANLGALKLGRVVHGYLMKNLFNGP-VEGNLHMETSILNMYIRGGNISSARA 406
+ +L+D G ++G+V G+ + N + N + ++N + AR
Sbjct: 349 TFTSLID-----GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 407 VFDRMPVKDVIA----WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
+ ++ KD+I + +I+GF G EA M + + +P+ +TF L+
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHC 463
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEA 506
G + E I++ M G P + ++ + GM KEA
Sbjct: 464 MKGRMFEAVSIFHKM-VAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 147/369 (39%), Gaps = 62/369 (16%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSM----RADAVYGK 64
M N + T V L + A+ F + + +DT TF ++ R L + +A + G
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFD-----LMLHRDVVSWTSMIAG 119
M+ G + D+ NT+I + K + A +F + DVV++TSMI+G
Sbjct: 232 MS-----GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 120 YISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
Y + A L + M R+ + P +VT V++ + + +I G + G D
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLIN 234
S++ Y G + L+ E+N R + +++ILI+ +++ L+
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCG 294
++ S + +I F + ++D + K G
Sbjct: 407 QLASKD-------------------------------IIPQPF----MYNPVIDGFCKAG 431
Query: 295 KLDISVQLFREIHFKS----YITLGAMMSGFIQNGSFMEAIALFQQMQA----EDLVIVP 346
K++ + + E+ K IT ++ G G EA+++F +M A D + V
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 347 EIWRNLLDA 355
+ LL A
Sbjct: 492 SLLSCLLKA 500
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 187/480 (38%), Gaps = 97/480 (20%)
Query: 10 AWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRAD-AVYGKMTHC 68
+NL R+ G A F+ M+ GV + NR L + + A GK+
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPN-------NRLLGFLVSSFAEKGKLHFA 157
Query: 69 VAIQMGLDLDLYFC----NTMIDFYVKCWCIGCARRVFDLMLH----RDVVSWTSMIAGY 120
A+ + ++ C N++++ VK + A ++FD L D ++ +I G
Sbjct: 158 TALLLQ-SFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL 216
Query: 121 ISERHVSVACDLFNKMR-VELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDW 179
A +L M EP+ VT ++Q C S LN +++ VKSG
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK-DVKSG----- 270
Query: 180 SVKNSVLRMYADKGSTEEVELLFSEINKRDVASWNILISFYSMVGDMMRVAGLINEMQSL 239
+ DV ++ +IS Y G M + L+++M L
Sbjct: 271 ------------------------SVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRL 306
Query: 240 EGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKCGKLDI 298
+ N+ T +++ +AK G + E + +I G F D V TSL+D Y + G++
Sbjct: 307 GIYPTNV-TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Query: 299 SVQLFREIH----FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLD 354
+L+ E++ F + T +++ ++A L Q+ ++D++ P ++ ++D
Sbjct: 366 GFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVID 425
Query: 355 ACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRMPVK 414
+ + G ++ A + + M K
Sbjct: 426 G---------------------------------------FCKAGKVNEANVIVEEMEKK 446
Query: 415 ----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEG 470
D I +T +I G G FEA+ F+ M+ P+ +T SLLS +G+ E
Sbjct: 447 KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 143/344 (41%), Gaps = 28/344 (8%)
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINK----RDVASWNILISFYSMVGDMMRVAGLINEM 236
V NS+L E+ LF E + D ++NILI VG + L+ M
Sbjct: 173 VVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVM 232
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF---SDDVLQTSLLDFYAKC 293
G +I T +I F K L+K + +K+G D V TS++ Y K
Sbjct: 233 SGF-GCEPDIVTYNTLIQGFCKSNELNKASEMF-KDVKSGSVCSPDVVTYTSMISGYCKA 290
Query: 294 GKLDISVQLFREIH----FKSYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEI- 348
GK+ + L ++ + + +T ++ G+ + G + A + +M + P++
Sbjct: 291 GKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS--FGCFPDVV 348
Query: 349 -WRNLLDACANLGALKLGRVVHGYLMKNLFNGP-VEGNLHMETSILNMYIRGGNISSARA 406
+ +L+D G ++G+V G+ + N + N + ++N + AR
Sbjct: 349 TFTSLID-----GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARE 403
Query: 407 VFDRMPVKDVIA----WTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACS 462
+ ++ KD+I + +I+GF G EA M + + +P+ +TF L+
Sbjct: 404 LLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHC 463
Query: 463 HSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEA 506
G + E I++ M G P + ++ + GM KEA
Sbjct: 464 MKGRMFEAVSIFHKM-VAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 147/369 (39%), Gaps = 62/369 (16%)
Query: 9 MAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSM----RADAVYGK 64
M N + T V L + A+ F + + +DT TF ++ R L + +A + G
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 65 MTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFD-----LMLHRDVVSWTSMIAG 119
M+ G + D+ NT+I + K + A +F + DVV++TSMI+G
Sbjct: 232 MS-----GFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 120 YISERHVSVACDLFNKM-RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
Y + A L + M R+ + P +VT V++ + + +I G + G D
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPD 346
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLIN 234
S++ Y G + L+ E+N R + +++ILI+ +++ L+
Sbjct: 347 VVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLG 406
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQTSLLDFYAKCG 294
++ S + +I F + ++D + K G
Sbjct: 407 QLASKD-------------------------------IIPQPF----MYNPVIDGFCKAG 431
Query: 295 KLDISVQLFREIHFKS----YITLGAMMSGFIQNGSFMEAIALFQQMQA----EDLVIVP 346
K++ + + E+ K IT ++ G G EA+++F +M A D + V
Sbjct: 432 KVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVS 491
Query: 347 EIWRNLLDA 355
+ LL A
Sbjct: 492 SLLSCLLKA 500
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 106/469 (22%), Positives = 201/469 (42%), Gaps = 50/469 (10%)
Query: 27 ALSTFKKMRQMGVPH-------DTFTFPVVNRALSSM----RADAVYGKMT-HCVAIQM- 73
A S+++K+ + G+ + D FT V +R L S+ R +V KM + V I +
Sbjct: 47 AFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLF 106
Query: 74 ------GLDLDLYFCNTMIDFYVKCWCIG---CARRVF-----DLMLHRDVVSWTSMIAG 119
G+ L CN ++ C C+ C F L D+V++TS++ G
Sbjct: 107 EQMQILGIPPLLCTCNIVM----HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162
Query: 120 YISERHVSVACDLFNK-MRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMD 178
Y + A LF++ + + +PN VT +++ C + LN ++ +G +
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 179 WSVKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLIN 234
N+++ + G + L ++ KR +V ++ LI + VG +M L N
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 235 EMQSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTG-FSDDVLQTSLLDFYAKC 293
M + + ++ T +I+ G L + + L+ + G + ++V+ T+L+ + K
Sbjct: 283 VMIQMSVYP-DVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 294 GKLDISVQLFREIHFK----SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIW 349
+++ +++F E+ K + IT ++ G+ G A +F QM + +
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 350 RNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFD 409
LLD G ++ ++ Y+ K ++ N+ T I+ + G + A +F
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKR----EMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 410 RMPVK----DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTF 454
+ K +VI +T+MI GF G EA F M E PN +
Sbjct: 458 SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/441 (21%), Positives = 185/441 (41%), Gaps = 29/441 (6%)
Query: 196 EEVELLFSEINKRDVASWNILISFYSMVGDMMR---VAGLINEMQSLEGHSWNIETLTLV 252
+ ++L ++ R + S S++ M R V L +MQ L G + T +V
Sbjct: 66 DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL-GIPPLLCTCNIV 124
Query: 253 ISAFAKCGNLSKGEGVHCLVIKTGFSDDVLQ-TSLLDFYAKCGKLDISVQLFREI---HF 308
+ + ++K GF D++ TSLL+ Y +++ ++ LF +I F
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 309 K-SYITLGAMMSGFIQNGSFMEAIALFQQMQAEDLVIVPEIWRNLLDACANLGALKLGRV 367
K + +T ++ +N A+ LF QM + L+ +G + G
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIG--RWGDA 242
Query: 368 VHGYLMKNLFNGPVEGNLHMETSILNMYIRGGNISSARAVFDRM----PVKDVIAWTSMI 423
+L++++ +E N+ T++++ +++ G + A+ +++ M DV + S+I
Sbjct: 243 --AWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 424 EGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGI 483
G +G EA + F LM + PN V + +L+ S V +G KI+Y M G+
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK-GV 359
Query: 484 EPALDHHTCMVD---LFGRCGMVKEALSIILKMVILPDSRIWGALLAASGVYGN--KTLG 538
+T ++ L GR + +E + + PD R + LL G K L
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 539 EYTAQRLLELEPDNAGYHTLLSNVKASAGRWNEVEELRREMSEKDLKKKPGWSCIEVKGV 598
+ R E++ + Y ++ + G+ + +L + K +K + I +
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGM-CKLGKVEDAFDLFCSLFSKGMKP----NVITYTTM 474
Query: 599 SYGFLSGDITHPEAEEIYAAL 619
GF + H EA+ ++ +
Sbjct: 475 ISGFCRRGLIH-EADSLFKKM 494
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 163/368 (44%), Gaps = 38/368 (10%)
Query: 20 DLGQFHSALSTFKK----------MRQMGVPHDTFTFPVV----NRALSSMRADAVYGKM 65
D + SA+S KK M+ +G+PH+ T ++ R A + GKM
Sbjct: 83 DFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM 142
Query: 66 THCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLML----HRDVVSWTSMIAGYI 121
I++G + + ++++ + + + A +FD M+ +VV + ++I G
Sbjct: 143 -----IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 122 SERHVSVACDLFNKMRVE-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWS 180
+ V A DL N+M + + P+ VT ++ C+S + T++ K + D
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 181 VKNSVLRMYADKGSTEEVELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEM 236
N+++ +G E E + E+ +R D+ ++++LI M + + M
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 237 QSLEGHSWNIETLTLVISAFAKCGNLSKGEGVHCLVIKTGF-SDDVLQTSLLDFYAKCGK 295
S +G ++ T +++I+ + K + G + C + + G + V T L+ Y + GK
Sbjct: 318 VS-KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 296 LDISVQLFREIHF----KSYITLGAMMSGFIQNGSFMEAIALFQQMQAE----DLVIVPE 347
L+++ ++FR + F + IT ++ G NG +A+ + MQ D+V
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 348 IWRNLLDA 355
I R + A
Sbjct: 437 IIRGMCKA 444
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 101/257 (39%), Gaps = 49/257 (19%)
Query: 7 NTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSSMRADAVYGKMT 66
N + +N I Q +AL +M + G+ D T+ N +S + + + T
Sbjct: 185 NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY---NSLISGLCSSGRWSDAT 241
Query: 67 HCVAIQMGLDL--DLYFCNTMIDFYVKCWCIGCARRVFDLMLHR---------------- 108
V+ ++ D++ N +ID VK + A ++ M+ R
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 109 -----------------------DVVSWTSMIAGYISERHVSVACDLFNKMRVE-LEPNS 144
DVV+++ +I GY + V LF +M + N+
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 145 VTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEEVELLFSE 204
VT +++Q C + LNV +I V GV + N +L D G E+ ++ ++
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 205 INKR----DVASWNILI 217
+ K D+ ++NI+I
Sbjct: 422 MQKNGMDADIVTYNIII 438
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/503 (20%), Positives = 222/503 (44%), Gaps = 47/503 (9%)
Query: 4 EPNNTMAWNLTIRTHVDLGQFHSALSTFKKMRQMGVPHDTFTFPVVNRALSS----MRAD 59
+P T +N I + G+ + A + F +M + GVP DT TF + + A+
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAE 360
Query: 60 AVYGKMTHCVAIQMGLDLDLYFCNTMIDFYVKCWCIGCA----RRVFDLMLHRDVVSWTS 115
++ KM + G+ D N ++ + I A R++ + L D V+ +
Sbjct: 361 SLLKKME-----EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRA 415
Query: 116 MIAGYISERHVSVACDLFNKM---RVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVK 172
++ + V+ + +M + ++ +SV +I+ + +N G + A+
Sbjct: 416 VLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY-------VNEGLVVQAKALF 468
Query: 173 SGVLMDWSVKNS----VLRMYADKGSTEEVELLFS-----EINKRDVASWNILISFYSMV 223
+D + ++ V+ +YA+KG E E +F + DV +N++I Y
Sbjct: 469 ERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKA 528
Query: 224 GDMMRVAGLINEMQSLEGHSWNIE-TLTLVISAFAKCGNLSKGEGVHCLVIKTGFSDDV- 281
+ L M++ +G +W E T + A + + + + ++ +G
Sbjct: 529 KLHEKALSLFKGMKN-QG-TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCK 586
Query: 282 LQTSLLDFYAKCGKLDISVQLFREIHF----KSYITLGAMMSGFIQNGSFMEAIALFQQM 337
+++ Y + G L +V L+ + + + G++++GF ++G EAI F+ M
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 338 QAEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMETSILNMYIR 397
+ + + +L+ A + +G L+ R V+ MK+ GP ++ S+L++
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDK-MKDSEGGP---DVAASNSMLSLCAD 702
Query: 398 GGNISSARAVFDRMPVK---DVIAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTF 454
G +S A ++F+ + K DVI++ +M+ + G EA++ M E + + +F
Sbjct: 703 LGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSF 762
Query: 455 LSLLSACSHSGLVSEGCKIYYSM 477
+++ + G +SE C++++ M
Sbjct: 763 NQVMACYAADGQLSECCELFHEM 785
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 191/461 (41%), Gaps = 49/461 (10%)
Query: 83 NTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYISERHVSVACDLFNKMRV 138
NT+ID Y K + A +F ML D V++ +MI + H+S A L KM
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 139 E-LEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLRMYADKGSTEE 197
+ + P++ T ++L + + + + K G+ D +VL + + E
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 198 VELLFSEINKR----DVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWNIETLTLVI 253
VE + +E+++ D S +++ Y G +++ L Q + TL VI
Sbjct: 429 VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQL--DCVLSSTTLAAVI 486
Query: 254 SAFAKCGNLSKGEGV-HCLVIKTGFSDDVLQTS-LLDFYAKCGKLDISVQLFREIHFKSY 311
+A+ G + E V + +G +DVL+ + ++ Y K + ++ LF+
Sbjct: 487 DVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFK------- 539
Query: 312 ITLGAMMSGFIQNGSFMEAI---ALFQQMQAEDLVIVPE-IWRNLLDACANLGALKLGRV 367
G G++ + +LFQ + DLV + I +LD+ G +
Sbjct: 540 --------GMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 368 VHGYLMKNLFNGPVEGNLHMET-----------SILNMYIRGGNISSARAVFDRMPVKDV 416
+ Y+ L + V+ ME S++N + G + A F M V
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGV 651
Query: 417 ----IAWTSMIEGFGSHGFGFEALKYFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCK 472
I TS+I+ + G EA + ++ M + P+ S+LS C+ G+VSE
Sbjct: 652 QSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAES 711
Query: 473 IYYSMKWGFGIEPALDHHTCMVDLFGRCGMVKEALSIILKM 513
I+ +++ G + T M L+ GM+ EA+ + +M
Sbjct: 712 IFNALREK-GTCDVISFATMMY-LYKGMGMLDEAIEVAEEM 750
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 130/316 (41%), Gaps = 36/316 (11%)
Query: 228 RVAGLINEMQSLEGHSWNIETLTLVISAFAKCGN-----LSKGEGVHCLVIKTGFSDDVL 282
RV + QS + + N+ +V+ A + G L E H V+ T + +L
Sbjct: 127 RVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGML 186
Query: 283 QTSLLDFYAKCGKLDISV----QLFREIHFKSYITLGAMMSGFIQNGSFMEAIALFQQMQ 338
+D Y K G + ++ + + +HF +T+ ++ F +G F A F+
Sbjct: 187 ----VDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWC 242
Query: 339 AEDLVIVPEIWRNLLDACANLGALKLGRVVHGYLMKNLFNGPVEGNLHMET--------- 389
A + + + + + + L + + L K P+E +LH +
Sbjct: 243 AGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKP 302
Query: 390 -------SILNMYIRGGNISSARAVFDRM-----PVKDVIAWTSMIEGFGSHGFGFEALK 437
+++++Y + G ++ A +F M P+ D + + +MI G+HG EA
Sbjct: 303 RLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPI-DTVTFNTMIHTCGTHGHLSEAES 361
Query: 438 YFNLMMEHRMQPNSVTFLSLLSACSHSGLVSEGCKIYYSMKWGFGIEPALDHHTCMVDLF 497
M E + P++ T+ LLS + +G + E YY G+ P H ++ +
Sbjct: 362 LLKKMEEKGISPDTKTYNILLSLHADAGDI-EAALEYYRKIRKVGLFPDTVTHRAVLHIL 420
Query: 498 GRCGMVKEALSIILKM 513
+ MV E ++I +M
Sbjct: 421 CQRKMVAEVEAVIAEM 436
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 114/255 (44%), Gaps = 13/255 (5%)
Query: 15 IRTHVDLGQFHSALSTFKKMRQMGV-PHDTFTFPVVNR-ALSSMRADAV-YGKMTHCVAI 71
I ++V LG A+ ++ M + GV P++ ++N A S M +A+ Y +M
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMME---- 647
Query: 72 QMGLDLDLYFCNTMIDFYVKCWCIGCARRVFDLMLHR----DVVSWTSMIAGYISERHVS 127
+ G+ + ++I Y K C+ ARRV+D M DV + SM++ VS
Sbjct: 648 EHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVS 707
Query: 128 VACDLFNKMRVELEPNSVTLIVMLQACCASTPLNVGTQIHGYAVKSGVLMDWSVKNSVLR 187
A +FN +R + + ++ M+ L+ ++ +SG+L D + N V+
Sbjct: 708 EAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMA 767
Query: 188 MYADKGSTEEVELLFSE--INKRDVASWNILISFYSMVGDMMRVAGLINEMQSLEGHSWN 245
YA G E LF E + ++ + W + ++++ + ++++Q+ +
Sbjct: 768 CYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKP 827
Query: 246 IETLTLVISAFAKCG 260
+ T + + F+ G
Sbjct: 828 LATPAITATLFSAMG 842