Miyakogusa Predicted Gene
- Lj0g3v0262119.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0262119.1 Non Chatacterized Hit- tr|A9NVM4|A9NVM4_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,37.43,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL,NODE_38045_length_712_cov_569.435364.path1.1
(156 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48090.1 | Symbols: EDS1, ATEDS1 | alpha/beta-Hydrolases supe... 139 1e-33
AT3G48090.2 | Symbols: EDS1, ATEDS1 | alpha/beta-Hydrolases supe... 138 1e-33
AT3G48080.1 | Symbols: | alpha/beta-Hydrolases superfamily prot... 126 5e-30
AT3G52430.1 | Symbols: PAD4, ATPAD4 | alpha/beta-Hydrolases supe... 63 9e-11
AT5G14930.2 | Symbols: SAG101 | senescence-associated gene 101 |... 52 2e-07
>AT3G48090.1 | Symbols: EDS1, ATEDS1 | alpha/beta-Hydrolases
superfamily protein | chr3:17755553-17757692 REVERSE
LENGTH=623
Length = 623
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 98/175 (56%), Gaps = 29/175 (16%)
Query: 1 MLKRYELPDEFEGKLEWIQRGTSFRFLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYT 60
++K+ +LPDEFEG ++WI+ T +R LVEPLDIANY+RHLKNEDTGPYM R RP RY Y
Sbjct: 438 LMKKCQLPDEFEGDIDWIKLATRYRRLVEPLDIANYHRHLKNEDTGPYMKRGRPTRYIYA 497
Query: 61 QRWLEHAKRVPKEEISESTFWAEMEEL----------------------CSWIS----NK 94
QR EH P I+E FW ++ L C W
Sbjct: 498 QRGYEHYILKPNGMIAEDVFWNKVNGLNLGLQLEEIQETLKNSGSECGSCFWAEVEELKG 557
Query: 95 KPFEDVMERVLQLEQNLKKWTESDKGEL-KKEVFLKDPTFIKWWENLPQEHKAKS 148
KP+E+V RV LE L +W GE+ KE+FL+ TF KWW LP+ HK+ S
Sbjct: 558 KPYEEVEVRVKTLEGMLGEWITD--GEVDDKEIFLEGSTFRKWWITLPKNHKSHS 610
>AT3G48090.2 | Symbols: EDS1, ATEDS1 | alpha/beta-Hydrolases
superfamily protein | chr3:17755553-17757292 REVERSE
LENGTH=515
Length = 515
Score = 138 bits (348), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 98/175 (56%), Gaps = 29/175 (16%)
Query: 1 MLKRYELPDEFEGKLEWIQRGTSFRFLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYT 60
++K+ +LPDEFEG ++WI+ T +R LVEPLDIANY+RHLKNEDTGPYM R RP RY Y
Sbjct: 330 LMKKCQLPDEFEGDIDWIKLATRYRRLVEPLDIANYHRHLKNEDTGPYMKRGRPTRYIYA 389
Query: 61 QRWLEHAKRVPKEEISESTFWAEMEEL----------------------CSWIS----NK 94
QR EH P I+E FW ++ L C W
Sbjct: 390 QRGYEHYILKPNGMIAEDVFWNKVNGLNLGLQLEEIQETLKNSGSECGSCFWAEVEELKG 449
Query: 95 KPFEDVMERVLQLEQNLKKWTESDKGEL-KKEVFLKDPTFIKWWENLPQEHKAKS 148
KP+E+V RV LE L +W GE+ KE+FL+ TF KWW LP+ HK+ S
Sbjct: 450 KPYEEVEVRVKTLEGMLGEWITD--GEVDDKEIFLEGSTFRKWWITLPKNHKSHS 502
>AT3G48080.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:17753104-17755145 REVERSE LENGTH=629
Length = 629
Score = 126 bits (317), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 92/171 (53%), Gaps = 28/171 (16%)
Query: 1 MLKRYELPDEFEGKLEWIQRGTSFRFLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYT 60
++K+ +LPD FEG WI T +R L+EPLDI+NY+ LKNEDTGPYM+ RP RY+Y
Sbjct: 443 LVKKGQLPDGFEGSRGWINLATQYRRLIEPLDISNYHGQLKNEDTGPYMLHGRPSRYKYA 502
Query: 61 QRWLEHAKRVPKEEISESTFWAEMEEL---------------------CSWIS----NKK 95
QR EH P I++ FW+++ L C W K
Sbjct: 503 QRGYEHDILKPTGMIAKDVFWSKVNGLNLGLQQDIQEILKNSGSECGSCFWAEVEELKGK 562
Query: 96 PFEDVMERVLQLEQNLKKWTESDKGEL-KKEVFLKDPTFIKWWENLPQEHK 145
P+E+V R LE L+ W + GE+ +KE+FL+ TF KWW LP HK
Sbjct: 563 PYEEVQVRFKTLEGLLEGWIKD--GEVDEKEIFLEGSTFRKWWNTLPDSHK 611
>AT3G52430.1 | Symbols: PAD4, ATPAD4 | alpha/beta-Hydrolases
superfamily protein | chr3:19431566-19434292 FORWARD
LENGTH=541
Length = 541
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 1 MLKRYELPDEFEGKLEWIQRGTSFRFLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYT 60
M++ ELP +F +WI ++ L EPLDIAN+Y++ + G Y+ RPKRY
Sbjct: 365 MVETNELPFDFHLGKKWIYASQFYQLLAEPLDIANFYKNRDIKTGGHYLEGNRPKRYEVI 424
Query: 61 QRWLEHAKRVPKEEI--------SESTFWAEMEELCSWIS-NKKPFEDVMERVLQLEQNL 111
+W + +VP+E + ++ FWA++E+ W+ +K D R L E+ +
Sbjct: 425 DKW-QKGVKVPEECVRSRYASTTQDTCFWAKLEQAKEWLDEARKESSDPQRRSLLREKIV 483
Query: 112 KKWTESDKGELKKEVFL----KDPTFIKWWENLPQEHKAK 147
+ ++ KKEV L K+ ++ W NL +E K K
Sbjct: 484 PFESYANTLVTKKEVSLDVKAKNSSYSVWEANL-KEFKCK 522
>AT5G14930.2 | Symbols: SAG101 | senescence-associated gene 101 |
chr5:4828754-4830769 FORWARD LENGTH=537
Length = 537
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 23/143 (16%)
Query: 14 KLEWIQRGTSFRFLVEPLDIANYYRHLKNEDTGPYMIRARPKRYRYTQRW------LEHA 67
K ++ G ++R ++EPLDIA YY + E Y R Y ++W L
Sbjct: 371 KRRFLFSGNNYRRMIEPLDIAEYYLEGRKE----YRTTGRSHHYVMLEKWFGMESILIEK 426
Query: 68 KRVPKEEISE-----STFWAEMEE-------LCSWISNKKPFEDVMERVLQLEQNLKKWT 115
+R K ++S+ S FWAE+E+ L + + + +V+ R L +E W
Sbjct: 427 ERCKKRDLSDLLTFDSCFWAEVEDSLIVINQLNTTVGMRDDVREVLTRKL-VEFEGYVWE 485
Query: 116 ESDKGELKKEVFLKDPTFIKWWE 138
K E+ E+FL++ +F+KWW+
Sbjct: 486 IITKREVSPEIFLEESSFMKWWK 508