Miyakogusa Predicted Gene
- Lj0g3v0261969.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0261969.1 tr|G7IW09|G7IW09_MEDTR Beclin 1 protein
OS=Medicago truncatula GN=MTR_3g018770 PE=4 SV=1,93.65,0,BECLIN
1-RELATED,NULL; BECLIN 1,Beclin family; coiled-coil,NULL; seg,NULL;
APG6,Beclin family,CUFF.17241.1
(504 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61710.1 | Symbols: ATATG6, ATG6, BECLIN1, AtBECLIN1 | AUTOPH... 759 0.0
AT3G61710.2 | Symbols: BECLIN1, AtBECLIN1 | AUTOPHAGY 6 | chr3:2... 527 e-150
AT3G61710.3 | Symbols: BECLIN1, AtBECLIN1 | AUTOPHAGY 6 | chr3:2... 431 e-121
>AT3G61710.1 | Symbols: ATATG6, ATG6, BECLIN1, AtBECLIN1 | AUTOPHAGY
6 | chr3:22839477-22842253 REVERSE LENGTH=517
Length = 517
Score = 759 bits (1961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/505 (71%), Positives = 411/505 (81%), Gaps = 7/505 (1%)
Query: 5 RSRTLPADPNVPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSGMQGSSIHGANSVMSTTK 64
+SRT+P DPN+P+WVCQNC +SL IVGVDSYA KFFNDP S QGSSIHGANSV+ +T+
Sbjct: 9 KSRTIPIDPNLPKWVCQNCHHSLTIVGVDSYAGKFFNDPPPSATQGSSIHGANSVLGSTR 68
Query: 65 MDNSYVVLPKQRP-QAQGVPPRPRG------DSSQTGKAMEESFVVVYKSESASDGGGTH 117
MDNS+VVLP+ +P Q+QG+PPRPRG D++Q+GKAMEESFVVVYKSE SD GG+H
Sbjct: 69 MDNSFVVLPRHKPPQSQGIPPRPRGASSPQPDATQSGKAMEESFVVVYKSEPVSDSGGSH 128
Query: 118 SLAPGADPGGHLQPHTSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVE 177
+L+ G L +TSGFN+TI VLTRAF+IA TQTQVEQPLCL+CMR+LSDKL+KEVE
Sbjct: 129 NLSLEVGQNGPLHSNTSGFNATINVLTRAFDIARTQTQVEQPLCLECMRVLSDKLEKEVE 188
Query: 178 DVNRDIEAYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNTEVNAE 237
DV RD+EAYEAC++RLEGE +DVLSEADF QN EVN +
Sbjct: 189 DVTRDVEAYEACVQRLEGETQDVLSEADFLKEKKKIEEEERKLVAAIEETEKQNAEVNHQ 248
Query: 238 LRELELKSTRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLN 297
L+ELE K RF ELE+RYW EFNNFQFQLI+HQEERDAILAKIEVSQAHLELL +TNVL
Sbjct: 249 LKELEFKGNRFNELEDRYWQEFNNFQFQLIAHQEERDAILAKIEVSQAHLELLNKTNVLI 308
Query: 298 DAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQYRIKI 357
DAFPI +DGEFGTINNFRLGRLP I VEWDEINAAWGQACLLLHTMC YFRPKFQ ++KI
Sbjct: 309 DAFPIRNDGEFGTINNFRLGRLPAIKVEWDEINAAWGQACLLLHTMCNYFRPKFQCQVKI 368
Query: 358 IPLGSYPRITDSSNSSYELFGPVNLFWSTRYDKAMTLFLACLKDFAEFAKSKDQENNIPP 417
P+GSYPRI DS+N +YELFGPVNLFWSTRYDKAMTL+L CLKDFA+FA SKDQENNIPP
Sbjct: 369 QPMGSYPRIVDSNNETYELFGPVNLFWSTRYDKAMTLYLMCLKDFADFANSKDQENNIPP 428
Query: 418 EKCFKLPYKIDNDKVENNSITQSFNKQENWTKALKYTLCNLKWALYWFVGNTNFQPLSTM 477
+ C LPYKI+ DKV SITQSFNKQE+WTKALKYTLCNLKWALYWFVGNTNFQPLS
Sbjct: 429 DNCLNLPYKIEKDKVLGYSITQSFNKQESWTKALKYTLCNLKWALYWFVGNTNFQPLSAT 488
Query: 478 VSSHAEVPAVGSLHTKRGTETKSES 502
VS + + A GSL+ KRG ++ S
Sbjct: 489 VSLPSNISAAGSLYAKRGPDSSKPS 513
>AT3G61710.2 | Symbols: BECLIN1, AtBECLIN1 | AUTOPHAGY 6 |
chr3:22840211-22842253 REVERSE LENGTH=386
Length = 386
Score = 527 bits (1358), Expect = e-150, Method: Compositional matrix adjust.
Identities = 252/356 (70%), Positives = 287/356 (80%), Gaps = 7/356 (1%)
Query: 5 RSRTLPADPNVPRWVCQNCRNSLCIVGVDSYADKFFNDPSRSGMQGSSIHGANSVMSTTK 64
+SRT+P DPN+P+WVCQNC +SL IVGVDSYA KFFNDP S QGSSIHGANSV+ +T+
Sbjct: 9 KSRTIPIDPNLPKWVCQNCHHSLTIVGVDSYAGKFFNDPPPSATQGSSIHGANSVLGSTR 68
Query: 65 MDNSYVVLPKQRP-QAQGVPPRPRG------DSSQTGKAMEESFVVVYKSESASDGGGTH 117
MDNS+VVLP+ +P Q+QG+PPRPRG D++Q+GKAMEESFVVVYKSE SD GG+H
Sbjct: 69 MDNSFVVLPRHKPPQSQGIPPRPRGASSPQPDATQSGKAMEESFVVVYKSEPVSDSGGSH 128
Query: 118 SLAPGADPGGHLQPHTSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVE 177
+L+ G L +TSGFN+TI VLTRAF+IA TQTQVEQPLCL+CMR+LSDKL+KEVE
Sbjct: 129 NLSLEVGQNGPLHSNTSGFNATINVLTRAFDIARTQTQVEQPLCLECMRVLSDKLEKEVE 188
Query: 178 DVNRDIEAYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNTEVNAE 237
DV RD+EAYEAC++RLEGE +DVLSEADF QN EVN +
Sbjct: 189 DVTRDVEAYEACVQRLEGETQDVLSEADFLKEKKKIEEEERKLVAAIEETEKQNAEVNHQ 248
Query: 238 LRELELKSTRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLN 297
L+ELE K RF ELE+RYW EFNNFQFQLI+HQEERDAILAKIEVSQAHLELL +TNVL
Sbjct: 249 LKELEFKGNRFNELEDRYWQEFNNFQFQLIAHQEERDAILAKIEVSQAHLELLNKTNVLI 308
Query: 298 DAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQY 353
DAFPI +DGEFGTINNFRLGRLP I VEWDEINAAWGQACLLLHTMC YFRPKFQY
Sbjct: 309 DAFPIRNDGEFGTINNFRLGRLPAIKVEWDEINAAWGQACLLLHTMCNYFRPKFQY 364
>AT3G61710.3 | Symbols: BECLIN1, AtBECLIN1 | AUTOPHAGY 6 |
chr3:22840211-22841815 REVERSE LENGTH=318
Length = 318
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 209/296 (70%), Positives = 236/296 (79%), Gaps = 7/296 (2%)
Query: 65 MDNSYVVLPKQRP-QAQGVPPRPRG------DSSQTGKAMEESFVVVYKSESASDGGGTH 117
MDNS+VVLP+ +P Q+QG+PPRPRG D++Q+GKAMEESFVVVYKSE SD GG+H
Sbjct: 1 MDNSFVVLPRHKPPQSQGIPPRPRGASSPQPDATQSGKAMEESFVVVYKSEPVSDSGGSH 60
Query: 118 SLAPGADPGGHLQPHTSGFNSTITVLTRAFEIATTQTQVEQPLCLDCMRILSDKLDKEVE 177
+L+ G L +TSGFN+TI VLTRAF+IA TQTQVEQPLCL+CMR+LSDKL+KEVE
Sbjct: 61 NLSLEVGQNGPLHSNTSGFNATINVLTRAFDIARTQTQVEQPLCLECMRVLSDKLEKEVE 120
Query: 178 DVNRDIEAYEACLKRLEGEARDVLSEADFXXXXXXXXXXXXXXXXXXXXXXXQNTEVNAE 237
DV RD+EAYEAC++RLEGE +DVLSEADF QN EVN +
Sbjct: 121 DVTRDVEAYEACVQRLEGETQDVLSEADFLKEKKKIEEEERKLVAAIEETEKQNAEVNHQ 180
Query: 238 LRELELKSTRFKELEERYWHEFNNFQFQLISHQEERDAILAKIEVSQAHLELLKRTNVLN 297
L+ELE K RF ELE+RYW EFNNFQFQLI+HQEERDAILAKIEVSQAHLELL +TNVL
Sbjct: 181 LKELEFKGNRFNELEDRYWQEFNNFQFQLIAHQEERDAILAKIEVSQAHLELLNKTNVLI 240
Query: 298 DAFPISHDGEFGTINNFRLGRLPKIPVEWDEINAAWGQACLLLHTMCQYFRPKFQY 353
DAFPI +DGEFGTINNFRLGRLP I VEWDEINAAWGQACLLLHTMC YFRPKFQY
Sbjct: 241 DAFPIRNDGEFGTINNFRLGRLPAIKVEWDEINAAWGQACLLLHTMCNYFRPKFQY 296