Miyakogusa Predicted Gene

Lj0g3v0261869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261869.1 Non Chatacterized Hit- tr|I3T776|I3T776_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.2,0,no
description,NULL; seg,NULL; FMN_red,NADPH-dependent FMN reductase;
Flavoproteins,NULL; CHROMATE R,CUFF.17232.1
         (249 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27890.1 | Symbols: NQR | NADPH:quinone oxidoreductase | chr3...   268   2e-72

>AT3G27890.1 | Symbols: NQR | NADPH:quinone oxidoreductase |
           chr3:10350807-10351938 REVERSE LENGTH=196
          Length = 196

 Score =  268 bits (686), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 129/186 (69%), Positives = 158/186 (84%), Gaps = 1/186 (0%)

Query: 64  IKVAALSGSLRKASYNTGLIRSAIELSKSGAVEGIQIDHVDISPLPLLNTDLIREGAYPA 123
           I+VAALSGSLRK S++TGL+R+AI+L+K  +V G+QI+++DISPLPL+NTDL   G YP 
Sbjct: 11  IRVAALSGSLRKTSFHTGLLRAAIDLTKE-SVPGLQIEYIDISPLPLINTDLEVNGTYPP 69

Query: 124 EVEAFRQKIIGADSILFASPENNYSVAAPLKNAIDWASIQPNVWAGKPAAIVSAXXXXXX 183
            VEAFRQKI+ ADSILFASPE N+SV+APLKNA+DWAS  PNVWA KPAAI+S       
Sbjct: 70  VVEAFRQKILEADSILFASPEYNFSVSAPLKNALDWASRPPNVWADKPAAIISTGGGFGG 129

Query: 184 XRSQYHLRQIGVFLDLHFINKPEFFLNAFQPPAKFNSDGDLIDEEARKRLKEVLLSLRTF 243
            RSQYHLRQIGVFLDLHFINKPEF LNAFQPP KF+++G+L+DE  ++RLK+VLLSL+ F
Sbjct: 130 GRSQYHLRQIGVFLDLHFINKPEFTLNAFQPPQKFDAEGNLVDEVTKERLKQVLLSLQAF 189

Query: 244 TMQLQG 249
           T++LQG
Sbjct: 190 TLRLQG 195