Miyakogusa Predicted Gene
- Lj0g3v0261839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0261839.1 CUFF.17227.1
(534 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 107 2e-23
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 107 2e-23
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 84 2e-16
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 84 3e-16
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 83 6e-16
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 70 4e-12
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 55 1e-07
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 54 3e-07
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 52 8e-07
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 52 8e-07
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 50 3e-06
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 144/558 (25%), Positives = 229/558 (41%), Gaps = 42/558 (7%)
Query: 17 AAKLLDMLSSNTQNALHMAEAGYFAPLVQYLKEGSDMNKILMATALSRLELTDHSKLALG 76
A K L L + +N MA G PL+ L EGS K+ MA L L L + K+ +
Sbjct: 252 ADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVA 311
Query: 77 EDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIRSGITGSLLQLLFCV--TS 134
+ L+ + T + + + LI +GI L++ LF V
Sbjct: 312 QTVG-SSLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQ 370
Query: 135 VLMTLREPVSAILARIAQ------------SESILVNEDVAQQMFSLLNLSSPVIQGHLL 182
+ + L+E + ILA I LV+E++ + + L + + P IQG LL
Sbjct: 371 LPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLL 430
Query: 183 EALNSMASHPGAS-KLRRKMKEKGALQLLLPFLK-ENNTQIRSKVLQLLYTLSKDLTDEL 240
L + S P + + ++ A+ L+ F++ N +R ++LL+ +S +++EL
Sbjct: 431 AVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMSEEL 490
Query: 241 TEYLDET--HLFNIVNIVXXXXXXXXXXXXVGILNNL--PASDRKVTDILKRENLLPILI 296
L T L ++V+I+ P D +T L RE +I
Sbjct: 491 ANALRSTVGQLGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKII 550
Query: 297 S-IAYSNAGSNSPTTTSLT--ESVAGVLLRFTSSFDKKLQ--LLSAELGVIPLLVKLLSS 351
S I G T E + +L R T + K+ L E + L + LL S
Sbjct: 551 SKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQS 610
Query: 352 GSPITKSRXXXXXXXXXXXXXXXXXXXXX---XWICVS--------PSVNAYCEVHDGYC 400
S R CVS P V C++H G C
Sbjct: 611 NSQDNIQRASATALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGIC 670
Query: 401 FVNRTFCLVKAGAVSPLIQILEDKEREAVEAALSALSTLLQDEI-WEGGVNSIANFSGVQ 459
V +FCLV+ AV L+ +L+ + + V AL+ALSTLL+D + GV I G+
Sbjct: 671 SVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGIT 730
Query: 460 AIIKS-LEVGDAKVQEKALWMLERIFRVEEHRVKYGESAQMV--LIDLAKKSNDSRLKST 516
I+ LE ++ +A+WM+ERI R+EE + GE + L+D A ++ D R +
Sbjct: 731 PILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVD-AFQNADFRTRQI 789
Query: 517 VAKVLAELELLQAQSSYF 534
K L ++ + S F
Sbjct: 790 AEKALRHIDKIPNFSGIF 807
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 144/558 (25%), Positives = 229/558 (41%), Gaps = 42/558 (7%)
Query: 17 AAKLLDMLSSNTQNALHMAEAGYFAPLVQYLKEGSDMNKILMATALSRLELTDHSKLALG 76
A K L L + +N MA G PL+ L EGS K+ MA L L L + K+ +
Sbjct: 252 ADKTLTNLERSEENVRQMAINGRLQPLLAKLLEGSPETKVSMAFYLGVLALNNDVKVIVA 311
Query: 77 EDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIRSGITGSLLQLLFCV--TS 134
+ L+ + T + + + LI +GI L++ LF V
Sbjct: 312 QTVG-SSLIDLMRTRDMSQREAALGALNNISSFEGSAKLLINTGILPPLIKDLFYVGPNQ 370
Query: 135 VLMTLREPVSAILARIAQ------------SESILVNEDVAQQMFSLLNLSSPVIQGHLL 182
+ + L+E + ILA I LV+E++ + + L + + P IQG LL
Sbjct: 371 LPIRLKEVSATILANIVNIGYDFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLL 430
Query: 183 EALNSMASHPGAS-KLRRKMKEKGALQLLLPFLK-ENNTQIRSKVLQLLYTLSKDLTDEL 240
L + S P + + ++ A+ L+ F++ N +R ++LL+ +S +++EL
Sbjct: 431 AVLVGLTSCPNSVINVVSAIRNSAAIISLVQFVEIHENDDLRLASIKLLHNISPHMSEEL 490
Query: 241 TEYLDET--HLFNIVNIVXXXXXXXXXXXXVGILNNL--PASDRKVTDILKRENLLPILI 296
L T L ++V+I+ P D +T L RE +I
Sbjct: 491 ANALRSTVGQLGSLVSIISENTPTITEEQAAAAGLLAELPERDLVLTMRLLREGAFEKII 550
Query: 297 S-IAYSNAGSNSPTTTSLT--ESVAGVLLRFTSSFDKKLQ--LLSAELGVIPLLVKLLSS 351
S I G T E + +L R T + K+ L E + L + LL S
Sbjct: 551 SKIVGIRQGEIRGIRFERTFLEGLVSILARITFALTKETDATLFCCEKNLPSLFLDLLQS 610
Query: 352 GSPITKSRXXXXXXXXXXXXXXXXXXXXX---XWICVS--------PSVNAYCEVHDGYC 400
S R CVS P V C++H G C
Sbjct: 611 NSQDNIQRASATALENLSLESKNLTKIPELPPPTYCVSIFSCLSKPPVVLGICKIHQGIC 670
Query: 401 FVNRTFCLVKAGAVSPLIQILEDKEREAVEAALSALSTLLQDEI-WEGGVNSIANFSGVQ 459
V +FCLV+ AV L+ +L+ + + V AL+ALSTLL+D + GV I G+
Sbjct: 671 SVRESFCLVEGQAVDKLVDLLDHENDKVVGPALAALSTLLEDGLDVVQGVRLIDEADGIT 730
Query: 460 AIIKS-LEVGDAKVQEKALWMLERIFRVEEHRVKYGESAQMV--LIDLAKKSNDSRLKST 516
I+ LE ++ +A+WM+ERI R+EE + GE + L+D A ++ D R +
Sbjct: 731 PILNVLLENRTENLRIRAVWMVERILRIEEIAREVGEEQNVTAALVD-AFQNADFRTRQI 789
Query: 517 VAKVLAELELLQAQSSYF 534
K L ++ + S F
Sbjct: 790 AEKALRHIDKIPNFSGIF 807
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 215/525 (40%), Gaps = 60/525 (11%)
Query: 10 DHVASHDAAKLLDMLSSNTQNALHMAEAGYFAPLVQYLKEGSDMNKILMATALSRLELTD 69
D AS + ++L L +N MAE+G PL+ +L EGS+ ++ MA L +++
Sbjct: 465 DSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDIGH 524
Query: 70 HSKLALGEDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIRSGITGSLLQLL 129
K + E A L+ + + ++ N + L+ GI +++ +
Sbjct: 525 EKKTYVAEK-ACPALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEM 583
Query: 130 FC--VTSVLMTLREPVSAILARIAQS----ESILVN--------EDVAQQMFSLLNLSSP 175
F V S LM R + ILA I +S E+ VN + + +L SSP
Sbjct: 584 FTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSP 643
Query: 176 -VIQGHLLEALNSMASHPGA-SKLRRKMKEKGALQLLLPFLKENNTQIRSKVLQLLYTLS 233
+ L+ L S++ P A + + +KE A ++ + + ++ L+LL L+
Sbjct: 644 DDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDELGVGALKLLIALT 703
Query: 234 KDLTDELTEYLDET--HLFNIVNI-VXXXXXXXXXXXXVGILNNLPASDRKVTDILKREN 290
+ L+E L +T N++ V +L LP + + L E+
Sbjct: 704 PYIGHTLSERLCKTRGQPENLIQCPVEANQITEKHAVSAKLLAKLPHQNLTLNLALVNES 763
Query: 291 LLPIL---ISIAYSNAGSNSPTTTSLTESVAGVLLRFTSS-FDKKLQLLSAELGVIPLLV 346
++ + I + + S T E + G+L+RFT++ ++ ++ L+ + + V
Sbjct: 764 IVSEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFTTTLYEPQMMYLARNHDLTSVFV 823
Query: 347 KLLSSGS-------------------------PITKSRXXXXXXXXXXXXXXXXXXXXXX 381
LL S P +S
Sbjct: 824 DLLMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSFSLRSSKKKQI 883
Query: 382 WICVSPSVNAYCEVHDGYCFVNRTFCLVKAGAVSPLIQILEDKEREAVEAALSALSTLLQ 441
IC +H G C TFCLV+A A++ L+ L+ + E VE+AL+A+ TLL
Sbjct: 884 EICA---------IHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTLLD 934
Query: 442 DEIW-EGGVNSIANFSGVQAIIKSL-EVGDAKVQEKALWMLERIF 484
D++ E ++ ++ + VQ I+ ++ E + +KA WM+++
Sbjct: 935 DKVEVEKSLSMLSEMNAVQLILNAVKEHKKESLLQKAFWMIDKFI 979
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 215/525 (40%), Gaps = 60/525 (11%)
Query: 10 DHVASHDAAKLLDMLSSNTQNALHMAEAGYFAPLVQYLKEGSDMNKILMATALSRLELTD 69
D AS + ++L L +N MAE+G PL+ +L EGS+ ++ MA L +++
Sbjct: 465 DSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDIGH 524
Query: 70 HSKLALGEDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIRSGITGSLLQLL 129
K + E A L+ + + ++ N + L+ GI +++ +
Sbjct: 525 EKKTYVAEK-ACPALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEM 583
Query: 130 FC--VTSVLMTLREPVSAILARIAQS----ESILVN--------EDVAQQMFSLLNLSSP 175
F V S LM R + ILA I +S E+ VN + + +L SSP
Sbjct: 584 FTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSP 643
Query: 176 -VIQGHLLEALNSMASHPGA-SKLRRKMKEKGALQLLLPFLKENNTQIRSKVLQLLYTLS 233
+ L+ L S++ P A + + +KE A ++ + + ++ L+LL L+
Sbjct: 644 DDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDELGVGALKLLIALT 703
Query: 234 KDLTDELTEYLDET--HLFNIVNI-VXXXXXXXXXXXXVGILNNLPASDRKVTDILKREN 290
+ L+E L +T N++ V +L LP + + L E+
Sbjct: 704 PYIGHTLSERLCKTRGQPENLIQCPVEANQITEKHAVSAKLLAKLPHQNLTLNLALVNES 763
Query: 291 LLPIL---ISIAYSNAGSNSPTTTSLTESVAGVLLRFTSS-FDKKLQLLSAELGVIPLLV 346
++ + I + + S T E + G+L+RFT++ ++ ++ L+ + + V
Sbjct: 764 IVSEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFTTTLYEPQMMYLARNHDLTSVFV 823
Query: 347 KLLSSGS-------------------------PITKSRXXXXXXXXXXXXXXXXXXXXXX 381
LL S P +S
Sbjct: 824 DLLMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSFSLRSSKKKQI 883
Query: 382 WICVSPSVNAYCEVHDGYCFVNRTFCLVKAGAVSPLIQILEDKEREAVEAALSALSTLLQ 441
IC +H G C TFCLV+A A++ L+ L+ + E VE+AL+A+ TLL
Sbjct: 884 EICA---------IHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTLLD 934
Query: 442 DEIW-EGGVNSIANFSGVQAIIKSL-EVGDAKVQEKALWMLERIF 484
D++ E ++ ++ + VQ I+ ++ E + +KA WM+++
Sbjct: 935 DKVEVEKSLSMLSEMNAVQLILNAVKEHKKESLLQKAFWMIDKFI 979
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 118/525 (22%), Positives = 217/525 (41%), Gaps = 60/525 (11%)
Query: 10 DHVASHDAAKLLDMLSSNTQNALHMAEAGYFAPLVQYLKEGSDMNKILMATALSRLELTD 69
D AS + ++L L +N MAE+G PL+ +L EGS+ ++ MA L +++
Sbjct: 465 DSFASETSDQILRNLEKCPENIKQMAESGLLEPLLGHLAEGSEETQVAMAAYLVEIDIGH 524
Query: 70 HSKLALGEDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIRSGITGSLLQLL 129
K + E A L+ + + ++ N + L+ GI +++ +
Sbjct: 525 EKKTYVAEK-ACPALIGLVQSENIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEM 583
Query: 130 FC--VTSVLMTLREPVSAILARIAQS----ESILVN--------EDVAQQMFSLLNLSSP 175
F V S LM R + ILA I +S E+ VN + + +L SSP
Sbjct: 584 FTKRVFSDLMNSRNEAATILANILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSP 643
Query: 176 V-IQGHLLEALNSMASHPGA-SKLRRKMKEKGALQLLLPFLKENNTQIRSKVLQLLYTLS 233
+ L+ L S++ P A + + +KE A ++ + + ++ L+LL L+
Sbjct: 644 DDLNIDLIRILLSLSKSPRAMATIVSVIKETDASFAMIELINNPHDELGVGALKLLIALT 703
Query: 234 KDLTDELTEYLDET--HLFNIVNI-VXXXXXXXXXXXXVGILNNLPASDRKVTDILKREN 290
+ L+E L +T N++ V +L LP + + L E+
Sbjct: 704 PYIGHTLSERLCKTRGQPENLIQCPVEANQITEKHAVSAKLLAKLPHQNLTLNLALVNES 763
Query: 291 LLPIL---ISIAYSNAGSNSPTTTSLTESVAGVLLRFTSS-FDKKLQLLSAELGVIPLLV 346
++ + I + + S T E + G+L+RFT++ ++ ++ L+ + + V
Sbjct: 764 IVSEILHAIHLIQRSGARTSRYATDFLEGLVGILVRFTTTLYEPQMMYLARNHDLTSVFV 823
Query: 347 KL-------------------LSSGS------PITKSRXXXXXXXXXXXXXXXXXXXXXX 381
L LSS + P +S
Sbjct: 824 DLLMKTSSDEVQRLSATGLENLSSTTMTLSRPPQPRSTKFMGSLSMPRSFSLRSSKKKQI 883
Query: 382 WICVSPSVNAYCEVHDGYCFVNRTFCLVKAGAVSPLIQILEDKEREAVEAALSALSTLLQ 441
IC +H G C TFCLV+A A++ L+ L+ + E VE+AL+A+ TLL
Sbjct: 884 EICA---------IHRGVCSAKNTFCLVEANAITKLLACLQSDKVEVVESALAAICTLLD 934
Query: 442 DEIW-EGGVNSIANFSGVQAIIKSL-EVGDAKVQEKALWMLERIF 484
D++ E ++ ++ + VQ I+ ++ E + +KA WM+++
Sbjct: 935 DKVEVEKSLSMLSEMNAVQLILNAVKEHKKESLLQKAFWMIDKFI 979
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 85/150 (56%), Gaps = 5/150 (3%)
Query: 389 VNAYCEVHDGYCFVNRTFCLVKAGAVSPLIQILEDKEREAVEAALSALSTLLQDEI-WEG 447
VN C++H G C + TFCLV+ GAV L+ +L+ + + VEAAL+ALS+LL+D + E
Sbjct: 649 VNGLCKIHQGICSLRETFCLVEGGAVEKLVALLDHENVKVVEAALAALSSLLEDGLDVEK 708
Query: 448 GVNSIANFSGVQAIIKSL-EVGDAKVQEKALWMLERIFRVEE--HRVKYGESAQMVLIDL 504
GV + G++ I+ L E ++ +A+WM+ERI R+E+ V +S L+D
Sbjct: 709 GVKILDEADGIRHILNVLRENRTERLTRRAVWMVERILRIEDIAREVAEEQSLSAALVD- 767
Query: 505 AKKSNDSRLKSTVAKVLAELELLQAQSSYF 534
A ++ D R + L ++ + SS F
Sbjct: 768 AFQNADFRTRQIAENALKHIDKIPNFSSIF 797
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 10/237 (4%)
Query: 17 AAKLLDMLSSNTQNALHMAEAGYFAPLVQYLKEGSDMNKILMATALSRLELTDHSKLALG 76
A + L+ + + + MA G PL+ L EGS K+ MA+ L L L + K+ +
Sbjct: 250 ADRTLENMERSEEIVRQMASYGRLQPLLGKLLEGSPETKLSMASFLGELPLNNDVKVLVA 309
Query: 77 EDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIRSGITGSLLQLLFCV--TS 134
+ LV + +G + + + LI GI L++ LF V +
Sbjct: 310 QTVG-SSLVDLMRSGDMPQREAALKALNKISSFEGSAKVLISKGILPPLIKDLFYVGPNN 368
Query: 135 VLMTLREPVSAILARIAQ-----SESILVNEDVAQQMFSLLNLSSPVIQGHLLEALNSMA 189
+ + L+E + ILA I ++ LV+E+ + + L++ + P IQ LLE L +
Sbjct: 369 LPIRLKEVSATILANIVNIGYDFDKATLVSENRVENLLHLISNTGPAIQCKLLEVLVGLT 428
Query: 190 SHPGA-SKLRRKMKEKGALQLLLPFLK-ENNTQIRSKVLQLLYTLSKDLTDELTEYL 244
S P K+ +K GA+ L+ F++ N +R ++LL+ LS +++EL + L
Sbjct: 429 SCPKTVPKVVYAIKTSGAIISLVQFIEVRENDDLRLASIKLLHNLSPFMSEELAKAL 485
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 2 LVAILTGDDHVASHDAAKLLDMLSSNTQNALHMAEAGYFAPLVQYLKEGS-DMNKILMAT 60
LV++L D DA L LS N N +AE+G PL+ LK G + K A
Sbjct: 468 LVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAA 527
Query: 61 ALSRLELTDHSKLALGEDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIRSG 120
L L + + K +GE GAIEPLV + +G L EN ++I +G
Sbjct: 528 TLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAG 587
Query: 121 ITGSLLQLL 129
L++L+
Sbjct: 588 AVRYLVELM 596
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%)
Query: 29 QNALHMAEAGYFAPLVQYLKEGSDMNKILMATALSRLELTDHSKLALGEDGAIEPLVKMF 88
+N +A +G PLV+ LK G+ K A AL RL + +K+A+G GAI LV +
Sbjct: 137 ENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEENKVAIGRSGAIPLLVNLL 196
Query: 89 STGKLEXXXXXXXXXXXXXXXTENVQRLIRSGITGSLLQLLFCVTSVLMTLREPVSAILA 148
TG EN R ++SGI L++L+ S ++ V ++L
Sbjct: 197 ETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMADFGSNMVDKSAFVMSLLM 256
Query: 149 RIAQSESILVNE 160
+ +S+ +V E
Sbjct: 257 SVPESKPAIVEE 268
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%)
Query: 1 MLVAILTGDDHVASHDAAKLLDMLSSNTQNALHMAEAGYFAPLVQYLKEGSDMNKILMAT 60
+LV +L D +A L LS N N +A+AG PL+ L+ GS K A
Sbjct: 587 LLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAA 646
Query: 61 ALSRLELTDHSKLALGEDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIRSG 120
L L + + +K+ +G+ GAI PLV + G EN +++SG
Sbjct: 647 TLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSG 706
Query: 121 ITGSLLQLL 129
L+ L+
Sbjct: 707 AVRYLIDLM 715
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%)
Query: 1 MLVAILTGDDHVASHDAAKLLDMLSSNTQNALHMAEAGYFAPLVQYLKEGSDMNKILMAT 60
+LV +L D +A L LS N N +A+AG PL+ L+ GS K A
Sbjct: 590 LLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAA 649
Query: 61 ALSRLELTDHSKLALGEDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIRSG 120
L L + + +K+ +G+ GAI PLV + G EN +++SG
Sbjct: 650 TLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSG 709
Query: 121 ITGSLLQLL 129
L+ L+
Sbjct: 710 AVRYLIDLM 718
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 79/177 (44%), Gaps = 4/177 (2%)
Query: 1 MLVAIL-TGDDHVASHDAAKLLDM-LSSNTQNALHMAEAGYFAPLVQYLKEGSDMNKILM 58
+LV +L T D + H LL++ + N + A+ AG +VQ LK+GS +
Sbjct: 398 LLVGLLSTPDSRIQEHSVTALLNLSICENNKGAI--VSAGAIPGIVQVLKKGSMEARENA 455
Query: 59 ATALSRLELTDHSKLALGEDGAIEPLVKMFSTGKLEXXXXXXXXXXXXXXXTENVQRLIR 118
A L L + D +K+ +G GAI PLV + + G N + IR
Sbjct: 456 AATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIR 515
Query: 119 SGITGSLLQLLFCVTSVLMTLREPVSAILARIAQSESILVNEDVAQQMFSLLNLSSP 175
+G+ +L +LL S ++ + AIL+ + ++I+ + D + + SP
Sbjct: 516 AGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSP 572