Miyakogusa Predicted Gene
- Lj0g3v0261799.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0261799.1 Non Chatacterized Hit- tr|I1J608|I1J608_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,26.49,2e-18,seg,NULL;
PPR: pentatricopeptide repeat domain,Pentatricopeptide repeat;
SUBFAMILY NOT NAMED,NULL; F,CUFF.17224.1
(570 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 405 e-113
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 402 e-112
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 397 e-111
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 392 e-109
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 389 e-108
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 387 e-107
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 378 e-105
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 376 e-104
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 370 e-102
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 369 e-102
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 367 e-102
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 358 6e-99
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 340 2e-93
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 6e-93
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 327 1e-89
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 321 1e-87
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 305 5e-83
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 6e-82
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 297 1e-80
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 296 2e-80
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 2e-74
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 247 1e-65
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 239 3e-63
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 238 6e-63
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 9e-63
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 1e-62
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 2e-61
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 2e-61
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 230 2e-60
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 5e-60
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 220 2e-57
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 217 2e-56
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 2e-56
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 9e-56
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 214 2e-55
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 8e-55
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 210 2e-54
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 2e-54
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 7e-54
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 2e-53
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 2e-52
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 3e-52
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 195 7e-50
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 2e-49
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 3e-49
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 191 1e-48
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 6e-48
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 7e-48
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 188 8e-48
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 188 8e-48
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 187 1e-47
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 9e-46
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 181 2e-45
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 180 2e-45
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 5e-45
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 6e-45
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 6e-45
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 4e-43
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 8e-42
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 168 1e-41
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 167 2e-41
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 166 4e-41
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 8e-40
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 3e-39
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 159 4e-39
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 158 1e-38
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 6e-37
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 1e-36
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 148 8e-36
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 144 1e-34
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 142 5e-34
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 8e-34
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 8e-34
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 2e-33
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 140 2e-33
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 7e-33
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 9e-33
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 4e-31
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 4e-31
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 6e-30
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 6e-30
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 126 4e-29
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 5e-29
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 125 8e-29
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 124 2e-28
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 3e-28
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 4e-28
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 1e-27
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 4e-27
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 117 3e-26
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 5e-25
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 9e-25
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 4e-24
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 105 8e-23
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 104 1e-22
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 104 2e-22
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 104 2e-22
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 103 2e-22
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 6e-22
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 100 3e-21
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 100 3e-21
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 99 1e-20
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 96 5e-20
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 6e-20
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 7e-20
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 94 2e-19
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 94 3e-19
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 94 3e-19
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 93 5e-19
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 93 6e-19
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 7e-19
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 9e-19
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 91 3e-18
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 91 3e-18
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 90 3e-18
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 89 8e-18
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 9e-18
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 88 1e-17
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 87 3e-17
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 87 3e-17
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 87 3e-17
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 86 5e-17
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 6e-17
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 86 6e-17
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 1e-16
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 85 1e-16
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 85 1e-16
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 84 2e-16
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 84 2e-16
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 84 3e-16
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 82 8e-16
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 9e-16
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 82 1e-15
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 82 1e-15
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 80 3e-15
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 79 9e-15
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 78 1e-14
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 77 3e-14
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 76 5e-14
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 72 8e-13
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 9e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 72 1e-12
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 1e-12
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 71 2e-12
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 71 3e-12
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 3e-12
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 69 7e-12
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 67 3e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 66 5e-11
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 65 1e-10
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 63 4e-10
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 59 8e-09
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 59 1e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 3e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 4e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 56 6e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 54 3e-07
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 52 1e-06
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 50 5e-06
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/535 (37%), Positives = 322/535 (60%), Gaps = 13/535 (2%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R L S + D+K D A+ F +M P P++ +F+ + + + K + + K++
Sbjct: 57 RERLRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE 115
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
GI + +T I+INC CR +T + VLG + K+G EPD T T++ GL EG V
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 175
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+A+ L RM E G + + T+ +I+NG+C+ G+TS A+ +K+E R K DV Y+ I+
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKG 266
DSLC+DG ++ A+ L+ EM KGI+ VVTYN L RGL C GK ++ +
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL--CKAGKWNDGALLLKDMVSRE 293
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
I+P+V TF+ ++D + KEG + A L M G+ PN+ TYN+L++ +C+Q+++ +A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
+ D M+ C P VT+ +LI G+C +K++D M + + +GL + T++ LV GF
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
C++G A+EL M HG LPD +TY I+LDGL +A+ ++ +L+K +D I
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
+Y+ +++G+C G+++DA F L KG+K +V TYT+M+ GLC++G L +A LL
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
MEE G PNDCTYN ++ LR GD++ S K ++ MK GFSADA++ +++I+
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 168/361 (46%), Gaps = 8/361 (2%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVL 263
++ ++ + N L ++ GI ++ T N + C + GKV+
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
K G PD TF+ ++ EG ++ A L+ M G +P+V TYNS++N C
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
A+ + M + TY+T+I C+ +D A+SL EM KG+ + T+N+LV
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
G CKAG L+ M +P+ IT+ ++LD K EA LY+E+ +
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+I Y+ ++DG C RL +A + D+ T+T +++G C +DD ++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSG 563
++ ++G N TY++ VQG + G I +E+ Q M G D T +L++
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 564 N 564
N
Sbjct: 451 N 451
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 159/368 (43%), Gaps = 12/368 (3%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+DAA+ F +M ++ + L+ + K + L+K M S I + TF +
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+++ + + + M G+ P+I+T T+++G C + + +A + M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ T ++I G C V + F+ + RG + Y+ ++ C+ G + A
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK-GIMPDVHT---------FSAIVD 279
L+ EM G+ PDV+TY L GL C GK+ K I D+ ++ I++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGL--CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
CK G + A L + GV+PNV TY +I+ C + + +A + M G P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
+ TYNTLI + + + L+ EM + G + D + ++ A L + +
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCL 601
Query: 400 STMQKHGQ 407
S K Q
Sbjct: 602 SKGSKSRQ 609
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/580 (37%), Positives = 337/580 (58%), Gaps = 50/580 (8%)
Query: 38 RELLSS--MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRM 95
RE LS + DLK +D AVD F +M P P+I EF L++ + KM + ISL +RM
Sbjct: 48 REKLSRNVLLDLK-LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM 106
Query: 96 HSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV 155
+L I D +++ I+INC CR S+ L VLG M K+G EPDIVTL++++NG C +
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166
Query: 156 EQALGLAMRMDEMGYRCNS-----------------------------------YTHGAI 180
+A+ L +M M Y+ N+ +T+G +
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 181 INGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGI 240
+NGLCK G+ A+ KK+E + DV +YT I+D+LC VN+AL L++EM KGI
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 241 QPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
+P+VVTYN L R L C+ G+ ++++ I P+V TFSA++D + KEG + A
Sbjct: 287 RPNVVTYNSLIRCL--CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
E+L M + ++P++FTY+SLIN C+ D++ +A +++ MI K C P+ VTYNTLI G
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
+CK K++++ M L EM +GL + T+N L+ G +AG A+++ M G PD
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
ITY+I+LDGL K +A+ ++ L+K ++ I Y+IM++G+C G+++D + F
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
L KG+K +V YT M+ G CR+GL ++A+ L +M+E G PN TYN ++ LR G
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Query: 531 DISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
D + S + ++ M+ GF DA+T ++IN + + ++
Sbjct: 585 DKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSY 624
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 216/579 (37%), Positives = 329/579 (56%), Gaps = 48/579 (8%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
+ L + + D+K V+ A+D F M P P +F L + V + K Y + K M
Sbjct: 39 KERLRNGIVDIK-VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGME 97
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
GIE D +T TI+INC CR + F VLG +K+G EPD +T +T+VNG C EG V
Sbjct: 98 LNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVS 157
Query: 157 QALGLAMRMDEM-----------------------------------GYRCNSYTHGAII 181
+A+ L RM EM G++ + T+G ++
Sbjct: 158 EAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
N LCK GN++ A+ F+K+E R K V Y+ ++DSLCKDG ++AL L++EM KGI+
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 242 PDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
DVVTY+ L GL C+ GK ++ + I+PDV TFSA++D + KEG + A+
Sbjct: 278 ADVVTYSSLIGGL--CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
L M G+ P+ TYNSLI+ C ++ + +A +++D M+ KGC P VTY+ LI+ +
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK K++D M L E+ +KGL P+ T+N LV GFC++G AAKEL M G P
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
+TY I+LDGL +A+ ++ +++K + I IY+I++ G+C+ ++ DA F
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
L KG+K DV TY +M+ GLC++G L +A+ L M+E GC P+D TYN+ ++ L
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
+ S + ++ MK GFSAD++T +++I+ S + D +F
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSF 614
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 141/325 (43%), Gaps = 70/325 (21%)
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL------------------- 347
+Y + + ++ DA+ +++SMI LP+ + +N L
Sbjct: 36 LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95
Query: 348 ----------------IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
I+ +C+ KK+ A S+LG G PD T++ LV GFC G
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGL----------------FKCHFYPE------ 429
A L+ M + Q PD +T + +++GL + F P+
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 430 -------------AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
A+ L+R++E+ N+ + YSI++D LC G DA F+ ++ KG
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
+K DV TY+ ++ GLC +G DD ++L +M + P+ T++ + ++ G + ++
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 537 KYLQLMKGKGFSADATTTELLINFF 561
+ M +G + D T LI+ F
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGF 360
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/579 (36%), Positives = 334/579 (57%), Gaps = 48/579 (8%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R+ ++ + DLK +D AV+ F M PFP+I EF+ L++ + KM + ISL ++M
Sbjct: 50 RKISINRLNDLK-LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQ 108
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
+LGI + +T++I+INC CR S+ L VL M K+G EPDIVTL +++NG C +
Sbjct: 109 NLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRIS 168
Query: 157 QALGLAMRMDEMGYRCNSYT-----------------------------------HGAII 181
A+ L +M EMGY+ +S+T +G ++
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVV 228
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
NGLCK G+ A+ KK+E + V +Y I+D+LC VN+AL L++EM KGI+
Sbjct: 229 NGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIR 288
Query: 242 PDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
P+VVTYN L R L C+ G+ ++++ I P+V TFSA++D + KEG + AE
Sbjct: 289 PNVVTYNSLIRCL--CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 346
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
+L M + ++P++FTY+SLIN C+ D++ +A +++ MI K C P+ VTYNTLI G+
Sbjct: 347 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 406
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK K++D+ M L EM +GL + T+ L+ GF +A A+ + M G LPD
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDI 466
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
+TY+I+LDGL A+ ++ L++ ++ I Y+IM++G+C G+++D + F
Sbjct: 467 MTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 526
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
L KG+K +V TYT M+ G CR+GL ++A+ L +M+E+G P+ TYN ++ LR GD
Sbjct: 527 LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGD 586
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
+ S + ++ M+ F DA+T L+ N + D +F
Sbjct: 587 KAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSF 625
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 328/579 (56%), Gaps = 48/579 (8%)
Query: 38 RELLSS-MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
RE+L + + D+ VD AVD F M PFP+I EF L++ V KM + ISL ++M
Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
+LGI D +T++I INC CR S+ L VL M K+G EPDIVTL++++NG C +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 157 QALGLAMRMDEMGYRCNSYT-----------------------------------HGAII 181
A+ L +M EMGY+ +++T +G ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
NGLCK G+ A+ KK+E + DV +Y I+D LCK +++AL L++EM KGI+
Sbjct: 231 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 290
Query: 242 PDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
PDV TY+ L L C+ G+ ++++ I P+V TFSA++D + KEG + AE
Sbjct: 291 PDVFTYSSLISCL--CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
+L M + ++P++FTY+SLIN C+ D++ +A +++ MI K C P+ VTY+TLI G+
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK K++++ M L EM +GL + T+ L+ GF +A A+ + M G P+
Sbjct: 409 CKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 468
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
+TY I+LDGL K +A+ ++ L++ ++ I Y+IM++G+C G+++D E F
Sbjct: 469 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
L KG+ +V Y M+ G CR+G ++A+ LL M+E G PN TYN ++ LR GD
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGD 588
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
S + ++ M+ GF+ DA+T L+ N + D +F
Sbjct: 589 REASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 627
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 387 bits (994), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/577 (36%), Positives = 318/577 (55%), Gaps = 44/577 (7%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R L S + D+K D AVD F +M P P + +F+ L ++V + K Y + L K+M
Sbjct: 41 RERLRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME 99
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
GI + +T +I+INC CR + L F +G + K+G EPD VT +T++NGLC EG V
Sbjct: 100 LKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVS 159
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLC------------------------------- 185
+AL L RM EMG++ T A++NGLC
Sbjct: 160 EALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVL 219
Query: 186 ----KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
K G T+ A+ +K+E R K D Y+ I+D LCKDG ++ A L++EM KG +
Sbjct: 220 KVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 279
Query: 242 PDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
D++ Y L RG + R ++K+ I PDV FSA++D + KEG + AE L
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
M + G+ P+ TY SLI+ C ++Q+ A + D M+ KGC P+ T+N LI+G+CK
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 354 IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRIT 413
+D + L +M +G+ D T+N L+ GFC+ G AKEL M PD ++
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 414 YAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
Y I+LDGL +A+ ++ ++EK ++ I IY+I++ G+C+ ++ DA + F L
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 474 AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDIS 533
KG+K DV TY IM+ GLC++G L +A+ L MEE G PN CTYN+ ++ L GD +
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDAT 579
Query: 534 RSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
+S K ++ +K GFS DA+T +++++ S + +F
Sbjct: 580 KSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRLKKSF 616
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 114/254 (44%)
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
+Y + + + + DA+ ++ M P + ++ L + K+ D + L +M
Sbjct: 39 SYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQM 98
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
KG+ ++ T + ++ C+ A + + K G PD +T++ +++GL
Sbjct: 99 ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158
Query: 428 PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIM 487
EA+ L + +M + + +++GLC G++ DA + G + + TY +
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPV 218
Query: 488 VQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
++ +C+ G A +LL MEE+ + Y++ + GL + G + + M+ KGF
Sbjct: 219 LKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGF 278
Query: 548 SADATTTELLINFF 561
AD LI F
Sbjct: 279 KADIIIYTTLIRGF 292
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ +L ++ A + F +M + P+I + +L++ + A+ + +++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 100 IEADSFTFTIVINCLCRLSRTDLG---FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
+E D + I+I+ +C S+ D FC L L G++PD+ T ++ GLC +G++
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK---GVKPDVKTYNIMIGGLCKKGSLS 544
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+A L +M+E G+ N T+ +I G+ + + ++++ GF D ++
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVV 604
Query: 217 DSLCKDGLVNEALGLWS 233
D L L L + S
Sbjct: 605 DMLSDGRLKKSFLDMLS 621
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 378 bits (970), Expect = e-105, Method: Compositional matrix adjust.
Identities = 200/579 (34%), Positives = 320/579 (55%), Gaps = 48/579 (8%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R +L S + +K D AVD F M P P + +F L + + K K Y ++L K+M
Sbjct: 57 RDKLSSGLVGIKA-DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQME 115
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPD------------------ 138
S GI +T +I+INC CR + F +G + K+G EPD
Sbjct: 116 SKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVS 175
Query: 139 -----------------IVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAII 181
++TL T+VNGLC G V A+ L RM E G++ N T+G ++
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVL 235
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
N +CK G T+ A+ +K+E R K D Y+ I+D LCKDG ++ A L++EM KG +
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 242 PDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
D++TYN L G C+ G+ ++K+ I P+V TFS ++D++ KEG + A+
Sbjct: 296 ADIITYNTLIGGF--CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
+L+ M + G+ PN TYNSLI+ C ++++++A+++ D MI KGC P +T+N LI+G+
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK ++D + L EM +G+ + T+N LV GFC++G AK+L M PD
Sbjct: 414 CKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
++Y I+LDGL +A+ ++ ++EK ++ I IY I++ G+C+ ++ DA + F
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
L KG+K+D Y IM+ LCR+ L A+ L M E+G P++ TYN+ ++ L D
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
+ + + ++ MK GF AD +T +++IN S + D +F
Sbjct: 594 ATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSF 632
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 168/394 (42%), Gaps = 43/394 (10%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A++ KM N + +++++I+ + K A +L M G +AD T+ +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
C R D G +L M K + P++VT + +++ EG + +A L M + G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
N+ T+ ++I+G CK AI + +G D+ + +++ CK +++ L L+
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK--------GIMPDVHTFSAIVDNYCKE 284
EM+ +G+ + VTYN L +G + +V KK + PD+ ++ ++D C
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486
Query: 285 GMIARAERLMGFMARV-----------------------------------GVEPNVFTY 309
G + +A + G + + GV+ + Y
Sbjct: 487 GELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAY 546
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
N +I+ C +D + A ++ M +G P +TYN LI A L+ EM +
Sbjct: 547 NIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKS 606
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
G D+ T ++ + + +++ST +
Sbjct: 607 SGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 137/325 (42%), Gaps = 70/325 (21%)
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL------------------- 347
+Y +++ + + DA+ ++ MI LP+ + +N L
Sbjct: 54 LSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQ 113
Query: 348 ----------------IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
I+ +C+ +K+ A S +G+++ G PD +N L+ G C
Sbjct: 114 MESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECR 173
Query: 392 PLAAKELISTMQKHGQLPDRITY----------------AIILDGLFKCHFYPE------ 429
A EL+ M + G P IT +++D + + F P
Sbjct: 174 VSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGP 233
Query: 430 -------------AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
A+ L R++E+ N+ YSI++DGLC G L +A F+ ++ KG
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 293
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
K D+ TY ++ G C G DD +LL DM ++ PN T+++ + ++ G + ++
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 537 KYLQLMKGKGFSADATTTELLINFF 561
+ L+ M +G + + T LI+ F
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGF 378
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 376 bits (965), Expect = e-104, Method: Compositional matrix adjust.
Identities = 204/580 (35%), Positives = 327/580 (56%), Gaps = 50/580 (8%)
Query: 38 RELLS--SMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRM 95
RE LS + +LK +D AV F +M PFP+I EF+ L++ + KM + ISL ++M
Sbjct: 49 REKLSRNGLSELK-LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQM 107
Query: 96 HSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV 155
+LGI + +T++I+INC CR S+ L VLG M K+G EP+IVTL++++NG C +
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 156 EQALGLAMRMDEMGYRCNSYT-----------------------------------HGAI 180
+A+ L +M GY+ N+ T +G +
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 181 INGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGI 240
+NGLCK G+T A K+E + V +Y I+D LCK +++AL L+ EM KGI
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 241 QPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
+P+VVTY+ L L C+ G+ ++++ I PDV TFSA++D + KEG + A
Sbjct: 288 RPNVVTYSSLISCL--CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEA 345
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
E+L M + ++P++ TY+SLIN C+ D++ +A ++++ M+ K C P VTYNTLI G
Sbjct: 346 EKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 405
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
+CK K++++ M + EM +GL + T+N L+ G +AG A+E+ M G P+
Sbjct: 406 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
+TY +LDGL K +A+ ++ L++ ++ I Y+IM++G+C G+++D + F
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
L KG+K DV Y M+ G CR+G ++A+ L +M+E G PN YN ++ LR G
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Query: 531 DISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
D S + ++ M+ GF+ DA+T L+ N + D +F
Sbjct: 586 DREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSF 625
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 203/579 (35%), Positives = 321/579 (55%), Gaps = 48/579 (8%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R L S + D+K D A+D F M P P + +F+ L + + K K Y ++L K+M
Sbjct: 57 RERLRSGLVDIKA-DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQME 115
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
GI + +T +I+INC CR + L F +G + K+G EP+ +T +T++NGLC EG V
Sbjct: 116 LKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175
Query: 157 QALGLAMRMDEMGYR---------------------------------C--NSYTHGAII 181
+AL L RM EMG++ C N+ T+G ++
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
N +CK G T+ A+ +K+E R K D Y+ I+D LCK G ++ A L++EM KGI
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 242 PDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
+++TYN L G C+ G+ ++K+ I P+V TFS ++D++ KEG + AE
Sbjct: 296 TNIITYNILIGGF--CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
L M G+ P+ TY SLI+ C ++ + A ++ D M+ KGC P+ T+N LI+G+
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK ++D + L +M +G+ D T+N L+ GFC+ G AKEL M P+
Sbjct: 414 CKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNI 473
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
+TY I+LDGL +A+ ++ ++EK ++ I IY+I++ G+C+ ++ DA + F
Sbjct: 474 VTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCS 533
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
L KG+K V TY IM+ GLC++G L +AE L MEE G P+ TYN+ ++ L GD
Sbjct: 534 LPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
++S K ++ +K GFS DA+T +++I+ S + +F
Sbjct: 594 ATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRLKKSF 632
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 149/364 (40%), Gaps = 65/364 (17%)
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAER 292
S K +QP ++ L L +C P+ +F C+ G A ++R
Sbjct: 10 SSQVSKFVQPRLLETGTLRIALINC-----------PNELSFC------CERGFSAFSDR 52
Query: 293 LMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWC 352
+ + R + + + + DA+ ++ MI+ LP+ + ++ L
Sbjct: 53 NLSYRER-------------LRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIA 99
Query: 353 KIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRI 412
K K+ D ++L +M KG+ ++ T + ++ FC+ A + + K G P+ I
Sbjct: 100 KTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTI 159
Query: 413 TYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD-------- 464
T++ +++GL EA+ L + +M + + +++GLC G+ +
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219
Query: 465 ---------------------------AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLL 497
A E ++ + +K+D Y+I++ GLC+ G L
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279
Query: 498 DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
D+A L +ME KG N TYN+ + G G K L+ M + + + T +L
Sbjct: 280 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 558 INFF 561
I+ F
Sbjct: 340 IDSF 343
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 6/197 (3%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ +L ++ A + F +M + PNI + +L++ + A+ + +++
Sbjct: 444 LIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK 503
Query: 100 IEADSFTFTIVINCLCRLSRTDLG---FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
+E D + I+I+ +C S+ D FC L L G++P + T ++ GLC +G +
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK---GVKPGVKTYNIMIGGLCKKGPLS 560
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+A L +M+E G+ + +T+ +I G+ + ++ ++++ GF D ++
Sbjct: 561 EAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Query: 217 DSLCKDGLVNEALGLWS 233
D L L L + S
Sbjct: 621 DMLSDGRLKKSFLDMLS 637
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 370 bits (950), Expect = e-102, Method: Compositional matrix adjust.
Identities = 199/566 (35%), Positives = 316/566 (55%), Gaps = 47/566 (8%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D AVD F +M PFP+I EF+ L++ + KMK + IS ++M LG+ + +T+ I
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+INCLCR S+ +LG M K+G P IVTL +++NG C + +A+ L +M EMG
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 170 YRCNSYT-----------------------------------HGAIINGLCKVGNTSAAI 194
Y+ ++ T +GA+INGLCK G A+
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 195 GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
K+E + DV +Y+ ++DSLCK V++AL L++EM KGI+PDV TY+ L L
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 255 FHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
C+ G+ +L++ I P+V TF++++D + KEG + AE+L M + ++P
Sbjct: 286 --CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 343
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
N+ TYNSLIN C+ D++ +A +++ M+ K CLP VTYNTLI+G+CK KK+ M L
Sbjct: 344 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
+M +GL + T+ L+ GF +A A+ + M G P+ +TY +LDGL K
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
+A+ ++ L+K ++ I Y+IM +G+C G+++D + F L KG+K DV Y
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKG 544
M+ G C++GL ++A L + M+E G P+ TYN ++ LR GD + S + ++ M+
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 583
Query: 545 KGFSADATTTELLINFFSGNKADNTF 570
F+ DA+T L+ + + D F
Sbjct: 584 CRFAGDASTYGLVTDMLHDGRLDKGF 609
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 177/390 (45%), Gaps = 43/390 (11%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++ S+ + VD A++ F + M + G
Sbjct: 246 VIDSLCKYRHVDDALNLFTE-----------------------------------MDNKG 270
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
I D FT++ +I+CLC R +L M + + P++VT ++++ EG + +A
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M + N T+ ++ING C A F + + DV Y +++
Sbjct: 331 KLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDV 271
CK V + + L+ +M+ +G+ + VTY L G F S +++ G+ P++
Sbjct: 391 CKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
T++ ++D CK G + +A + ++ + +EP+++TYN + C +++D ++ S
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
+ KG P + YNT+I G+CK ++A +L +M G PD T+N L+ + G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGL 421
A+ ELI M+ D TY ++ D L
Sbjct: 571 KAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 109/242 (45%)
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
L ++ +A+ ++ M+ PS V ++ L+ K+KK D +S +M G++ ++
Sbjct: 42 LHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLY 101
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
T+N ++ C+ A ++ M K G P +T +L+G + EAV+L ++
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLL 497
+M ++ ++ GL + + +A + KG + D+ TY ++ GLC+ G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 498 DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
D A LL ME+ + Y+ + L + + + M KG D T L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 558 IN 559
I+
Sbjct: 282 IS 283
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
K V ++ F M+ N +T LI+ + A + K+M S G+ + T+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
+++ LC+ + + V + K +EPDI T + G+C G VE L +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G + + + +I+G CK G A F K++ G D Y ++ + +DG
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM 268
+ L EM D TY +T + H R L KG +
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLVT-DMLHDGR---LDKGFL 610
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 207/579 (35%), Positives = 319/579 (55%), Gaps = 49/579 (8%)
Query: 38 RELL-SSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
RE+L + + D+K +D A+ F M P P+I EF L++ + KMK + ISL ++M
Sbjct: 54 REILRNGLHDMK-LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
L I +T+ I+INC CR S+ L +LG M K+G EP IVTL++++NG C +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 157 QALGLAMRMDEMGYR---------------------------------C--NSYTHGAII 181
A+ L +M EMGYR C N T+G ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
NGLCK G+T A+ K+E + DV ++ I+DSLCK V++AL L+ EM KGI+
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 242 PDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
P+VVTY+ L L CS G+ +++K I P++ TF+A++D + KEG AE
Sbjct: 293 PNVVTYSSLISCL--CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
+L M + ++P++FTYNSL+N C+ D++ A ++++ M+ K C P VTYNTLI G+
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK K+++ L EM ++GL D T+ L+ G G A+++ M G PD
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
+TY+I+LDGL +A+ ++ ++K + I IY+ M++G+C G++ D + F
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
L KG+K +V TY M+ GLC + LL +A LL M+E G PN TYN ++ LR GD
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGD 590
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
+ S + ++ M+ F DA+T L+ N + D +F
Sbjct: 591 KAASAELIREMRSCRFVGDASTIGLVANMLHDGRLDKSF 629
Score = 179 bits (453), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 189/372 (50%), Gaps = 8/372 (2%)
Query: 202 GRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR-- 259
GR F Y I+ + D +++A+GL+ M P +V +N L + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD 102
Query: 260 ------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLI 313
K+ + I+ ++T++ +++ +C+ I+ A L+G M ++G EP++ T +SL+
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 314 NAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT 373
N +C ++ DA+ + D M+ G P T+T+ TLIHG K +A++L+ MV +G
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 374 PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSL 433
P++ T+ +V G CK G A L++ M+ D + + I+D L K +A++L
Sbjct: 223 PNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 282
Query: 434 YRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR 493
++E+E + ++ YS ++ LCSYGR DA + S + K + ++ T+ ++ +
Sbjct: 283 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 494 EGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
EG +AE+L DM ++ P+ TYN V G + ++++ + M K D T
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 554 TELLINFFSGNK 565
LI F +K
Sbjct: 403 YNTLIKGFCKSK 414
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/579 (35%), Positives = 323/579 (55%), Gaps = 51/579 (8%)
Query: 38 RELLSS-MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
RE+L + + D+ VD AVD F M PFP+I EF L++ V KM + ISL ++M
Sbjct: 51 REILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ 110
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
+LGI D +T++I INC CR S+ L VL M K+G EPDIVTL++++NG C +
Sbjct: 111 TLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRIS 170
Query: 157 QALGLAMRMDEMGYRCNSYT-----------------------------------HGAII 181
A+ L +M EMGY+ +++T +G ++
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 230
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
NGLCK G+ A+ K+E K +V ++ I+DSLCK V A+ L++EM KGI+
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 242 PDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
P+VVTYN L L C+ G+ +L+K I P+V TF+A++D + KEG + AE
Sbjct: 291 PNVVTYNSLINCL--CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
+L M + ++P+ TYN LIN C+ +++ +A +++ M+ K CLP+ TYNTLI+G+
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK K+++ + L EM +GL + T+ ++ GF +AG +A+ + M + D
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
+TY+I+L GL A+ +++ L+K ++ +I IY+ M++G+C G++ +A + F
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCS 528
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
L +K DV TY M+ GLC + LL +A+ L M+E G PN TYN ++ LR D
Sbjct: 529 L---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
+ S + ++ M+ GF DA+T L+ N + D +F
Sbjct: 586 RAASAELIKEMRSSGFVGDASTISLVTNMLHDGRLDKSF 624
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 198/556 (35%), Positives = 304/556 (54%), Gaps = 47/556 (8%)
Query: 60 MAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSR 119
M P P+I EF L++ + KMK + ISL ++M LGI + +T+ I+INC CR S+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 120 TDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYR-------- 171
L +LG M K+G EP IVTL++++NG C + A+ L +M EMGYR
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 172 -------------------------C--NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG 204
C N T+G ++NGLCK G+ A K+E
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--- 261
+ DV ++ I+DSLCK V++AL L+ EM KGI+P+VVTY+ L L CS G+
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL--CSYGRWSD 238
Query: 262 -------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
+++K I P++ TF+A++D + KEG AE+L M + ++P++FTYNSLIN
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP 374
C+ D++ A ++++ M+ K C P TYNTLI G+CK K+++ L EM ++GL
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 375 DICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLY 434
D T+ L+ G G A+++ M G PD +TY+I+LDGL +A+ ++
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 435 RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
++K + I IY+ M++G+C G++ D + F L KG+K +V TY M+ GLC +
Sbjct: 419 DYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 478
Query: 495 GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTT 554
LL +A LL M+E G P+ TYN ++ LR GD + S + ++ M+ F DA+T
Sbjct: 479 RLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538
Query: 555 ELLINFFSGNKADNTF 570
L+ N + D +F
Sbjct: 539 GLVANMLHDGRLDKSF 554
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 188/544 (34%), Positives = 307/544 (56%), Gaps = 12/544 (2%)
Query: 38 RELLSS--MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRM 95
RE LS ++DLK +D A+ F M PFP+I EF+ L++ + KM + ISL ++M
Sbjct: 43 RENLSRKVLQDLK-LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 101
Query: 96 HSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV 155
+LGI + +T++I IN CR S+ L +LG M K+G P IVTL +++NG C +
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 156 EQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
+A+ L +M EMGY+ ++ T +++GL + S A+ +++ +G + D+ Y A+
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGI 267
++ LCK G + AL L ++M I+ DVV YN + GL K+ KGI
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
PDV T++ ++ C G + A RL+ M + P++ +N+LI+A + ++ +A K
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 328 VYDSMI-YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
+YD M+ K C P V YNTLI G+CK K++++ M + EM +GL + T+ L+ GF
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
+A A+ + M G PD +TY I+LDGL A+ ++ ++K ++ I
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
Y+ M++ LC G+++D + F L KG+K +V TYT M+ G CR+GL ++A+ L ++
Sbjct: 462 VTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVE 521
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKA 566
M+E G PN TYN ++ LR GD + S + ++ M+ GF+ DA+T L+ N +
Sbjct: 522 MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHDGRL 581
Query: 567 DNTF 570
D +F
Sbjct: 582 DKSF 585
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 182/524 (34%), Positives = 292/524 (55%), Gaps = 43/524 (8%)
Query: 38 RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS 97
RE+L + +D A+ F M P P+I EF L++ + KMK + ISL ++M
Sbjct: 54 REILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQR 113
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
LGI + +T+ I+INC CR S+ L +LG M K+G EP IVTL++++NG C +
Sbjct: 114 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 158 ALGLAMRMDEMGYR---------------------------------C--NSYTHGAIIN 182
A+ L +M EMGYR C N T+G ++N
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 233
Query: 183 GLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQP 242
GLCK G+ A K+E + +V +Y+ ++DSLCK ++AL L++EM KG++P
Sbjct: 234 GLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 293
Query: 243 DVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLM 294
+V+TY+ L L + R ++++ I P+V TF+A++D + KEG + AE+L
Sbjct: 294 NVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLY 353
Query: 295 GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
M + ++P++FTY+SLIN C+ D++ +A +++ MI K C P+ VTYNTLI+G+CK
Sbjct: 354 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKA 413
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
K++D+ + L EM +GL + T+ L+ GF +A A+ + M G P+ +TY
Sbjct: 414 KRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTY 473
Query: 415 AIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
+LDGL K +A+ ++ L++ ++ I Y+IM++G+C G+++D + F L
Sbjct: 474 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 533
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
KG+K DV Y M+ G CR+GL ++A+ L M E G P+ T
Sbjct: 534 KGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 211/436 (48%), Gaps = 11/436 (2%)
Query: 119 RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHG 178
+ D + G M K P I +++ + + + L +M +G N YT+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 179 AIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
+IN C+ S A+ K+ G++ + +++++ C +++A+ L +M
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 239 GIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
G +PD +T+ L GLF ++ +++++G P++ T+ +V+ CK G I A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
L+ M +E NV Y+++I++ C DA+ ++ M KG P+ +TY++LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
C ++ A LL +M+ + + P++ T+NAL+ F K G + A++L M K PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
TY+ +++G EA ++ + + ++ Y+ +++G C R+ + E F
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
+ +GL + TYT ++ G + D+A+ + M G PN TYN + GL + G
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 531 DISRSE---KYLQLMK 543
+ ++ +YLQ K
Sbjct: 485 KLEKAMVVFEYLQRSK 500
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/372 (26%), Positives = 186/372 (50%), Gaps = 8/372 (2%)
Query: 202 GRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR-- 259
GR F Y I+ + +++A+GL+ M P + +N L + +
Sbjct: 43 GRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFD 102
Query: 260 ------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLI 313
K+ + GI +++T++ +++ +C+ I+ A L+G M ++G EP++ T +SL+
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLL 162
Query: 314 NAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT 373
N +C ++ DA+ + D M+ G P T+T+ TLIHG K +A++L+ MV +G
Sbjct: 163 NGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ 222
Query: 374 PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSL 433
P++ T+ +V G CK G A L++ M+ + + Y+ ++D L K +A++L
Sbjct: 223 PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNL 282
Query: 434 YRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR 493
+ E+E + ++ YS ++ LC+Y R DA S + + + +V T+ ++ +
Sbjct: 283 FTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVK 342
Query: 494 EGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
EG L +AE+L +M ++ P+ TY+ + G + ++ +LM K + T
Sbjct: 343 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402
Query: 554 TELLINFFSGNK 565
LIN F K
Sbjct: 403 YNTLINGFCKAK 414
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 177/367 (48%), Gaps = 9/367 (2%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVL 263
+ ++ ++ K + + L +M GI ++ TYN L S+ GK++
Sbjct: 88 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
K G P + T S++++ YC I+ A L+ M +G P+ T+ +LI+ L ++
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
+A+ + D M+ +GC P+ VTY +++G CK +D A +LL +M + ++ ++ ++
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
CK A L + M+ G P+ ITY+ ++ L + +A L ++ + ++
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
++ ++ ++D G+L +A + + + + + D+FTY+ ++ G C LD+A+ +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT-TELLINFFS 562
M K C PN TYN + G + I + + M +G + T T L+ FF
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 563 GNKADNT 569
DN
Sbjct: 448 ARDCDNA 454
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 300/592 (50%), Gaps = 66/592 (11%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
+L S K++D A+DFF+ M PF + +I + V+M AISL ++M
Sbjct: 76 KLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR 135
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTI------------- 145
I + ++F I+I C C + G + K+G +PD+VT T+
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 146 -------------------------------------VNGLCAEGNVEQALGLAMRMDEM 168
+NGLC EG V +A L +M
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G + T+G I+NG+CK+G+T +A+ K+E K DV +Y+AI+D LCKDG ++A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIV 278
L+SEM KGI P+V TYNC+ G CS G+ ++++ I PDV TF+A++
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGF--CSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
KEG + AE+L M + P+ TYNS+I C ++ DA ++D M
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS---- 429
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P VT+NT+I +C+ K++D+ M LL E+ +GL + T+N L+ GFC+ AA++L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
M HG PD IT I+L G + EA+ L+ ++ +D Y+I++ G+C
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
++ +A + F L G++ DV TY +M+ G C + + DA L M++ G P++ T
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
YN ++G L+ G+I +S + + M+ GFS DA T +++ + + + D +F
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDKSF 661
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 323 bits (827), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 283/521 (54%), Gaps = 54/521 (10%)
Query: 38 RELLSS--MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRM 95
RE LS +RD+K DA +D F+ M PFP+I +F L++ +VK+K Y ISL K+M
Sbjct: 53 RERLSKTRLRDIKLNDA-IDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 111
Query: 96 HSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV 155
LGI D+ T ++N C V
Sbjct: 112 EVLGIR-----------------------------------NDLYTFNIVINCFCCCFQV 136
Query: 156 EQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
AL + +M ++GY + T G+++NG C+ S A+ K+ G+K D+ Y AI
Sbjct: 137 SLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGI 267
+DSLCK VN+A + E+ KGI+P+VVTY L GL + SR ++KK I
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
P+V T+SA++D + K G + A+ L M R+ ++P++ TY+SLIN CL D++ +A +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
++D M+ KGCL V+YNTLI+G+CK K+++ M L EM +GL + T+N L+ GF
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
+AG A+E S M G PD TY I+L GL +A+ ++ +++K +D I
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIV 436
Query: 448 IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
Y+ ++ G+C G++++A F L KGLK D+ TYT M+ GLC +GLL + E L M
Sbjct: 437 TYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
+++G NDCT L GDI+ S + ++ M G++
Sbjct: 497 KQEGLMKNDCT--------LSDGDITLSAELIKKMLSCGYA 529
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 187/346 (54%), Gaps = 8/346 (2%)
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL----KK----GIMPDVH 272
+D +N+A+ L+S+M P +V +N L + + V+ KK GI D++
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
TF+ +++ +C ++ A ++G M ++G EP+ T SL+N C ++++ DA+ + D M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
+ G P V YN +I CK K+++ A E+ KG+ P++ T+ ALV G C +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIM 452
A L+S M K P+ ITY+ +LD K EA L+ E+ +M++D I YS +
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 453 LDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGC 512
++GLC + R+ +A + F + +KG DV +Y ++ G C+ ++D +L +M ++G
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Query: 513 PPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
N TYN +QG + GD+ +++++ M G S D T +L+
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 185/578 (32%), Positives = 293/578 (50%), Gaps = 66/578 (11%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
+L S K++D A+DFF+ M PF + +I + V+M AISL ++M
Sbjct: 76 KLKSGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR 135
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTI------------- 145
I + ++F I+I C C + G + K+G +PD+VT T+
Sbjct: 136 RIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEA 195
Query: 146 -------------------------------------VNGLCAEGNVEQALGLAMRMDEM 168
+NGLC EG V +A L +M
Sbjct: 196 LALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGK 255
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G + T+G I+NG+CK+G+T +A+ K+E K DV +Y+AI+D LCKDG ++A
Sbjct: 256 GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIV 278
L+SEM KGI P+V TYNC+ G CS G+ ++++ I PDV TF+A++
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGF--CSFGRWSDAQRLLRDMIEREINPDVLTFNALI 373
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
KEG + AE+L M + P+ TYNS+I C ++ DA ++D M
Sbjct: 374 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----AS 429
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P VT+NT+I +C+ K++D+ M LL E+ +GL + T+N L+ GFC+ AA++L
Sbjct: 430 PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 489
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
M HG PD IT I+L G + EA+ L+ ++ +D Y+I++ G+C
Sbjct: 490 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 549
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
++ +A + F L G++ DV TY +M+ G C + + DA L M++ G P++ T
Sbjct: 550 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNST 609
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTEL 556
YN ++G L+ G+I +S + + M+ GFS DA T ++
Sbjct: 610 YNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKM 647
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 141/281 (50%), Gaps = 16/281 (5%)
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
N++++N LI C ++ ++ + + G P VT+NTL+HG C ++ +A++L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 365 G---------------EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
G +MV GLTP + T+N L+ G C G L A L++ M G
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 410 DRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFF 469
D +TY I++G+ K A++L ++E+ ++ + IYS ++D LC G DA+ F
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 470 SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
S + KG+ +VFTY M+ G C G DA++LL DM E+ P+ T+N + ++
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 530 GDISRSEKYLQLMKGKGFSADATT-TELLINFFSGNKADNT 569
G + +EK M + D T ++ F N+ D+
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA 420
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 100/237 (42%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
K VD + +++ N + LI+ ++ + A L + M S G+ D+ T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
I++ C + + + ++ ++ D V I++G+C V++A L +
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 565
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G + T+ +I+G C S A F K++ G + D Y ++ K G +++
Sbjct: 566 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKE 284
++ L SEM G D T + S ++++ + P ++ ++ + Y E
Sbjct: 626 SIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIENYLRPKINGETSSIPRYVVE 682
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/514 (33%), Positives = 278/514 (54%), Gaps = 30/514 (5%)
Query: 38 RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS 97
RE+L + + A+D F M P P+I +FT L+N++ KMK + I+L +
Sbjct: 41 REILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQI 100
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
+G+ D +T +++NC C+ S+ L LG M K+G EPDIVT T+++NG C +E+
Sbjct: 101 MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEE 160
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
A+ + +M EMG + + + II+ LCK G+ + A+ F ++E G + DV +YT++++
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAI 277
LC G +A L MT + I+PDV+T+N A+
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFN---------------------------AL 253
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
+D + KEG AE L M R+ + PN+FTY SLIN C++ + +A +++ M KGC
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGC 313
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
P V Y +LI+G+CK KK+D AM + EM KGLT + T+ L+ GF + G P A+E
Sbjct: 314 FPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQE 373
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD---RHITIYSIMLD 454
+ S M G P+ TY ++L L +A+ ++ +++K +D +I Y+++L
Sbjct: 374 VFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLH 433
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
GLC G+L+ A F ++ + + I + TYTI++QG+C+ G + +A L + KG P
Sbjct: 434 GLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKP 493
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
N TY + GL R G + + MK G S
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 177/342 (51%), Gaps = 8/342 (2%)
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK--------GIMPDVHTFSAI 277
NEAL L++ M P ++ + L + + V+ G+ D++T + +
Sbjct: 54 NEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLL 113
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
++ +C+ A +G M ++G EP++ T+ SLIN CL ++M++AM + + M+ G
Sbjct: 114 MNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI 173
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
P V Y T+I CK ++ A+SL +M N G+ PD+ + +LV G C +G A
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
L+ M K PD IT+ ++D K + +A LY E+ +M++ +I Y+ +++G C
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC 517
G + +AR+ F ++ KG DV YT ++ G C+ +DDA ++ +M +KG N
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353
Query: 518 TYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
TY +QG + G + +++ M +G + T +L++
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLH 395
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 142/294 (48%)
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
+P + F+ +++ K L + +GV +++T N L+N C Q A
Sbjct: 69 LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
M+ G P VT+ +LI+G+C +M++AMS++ +MV G+ PD+ + ++ C
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
K G A L M+ +G PD + Y +++GL + +A SL R + K + +
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 448 IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
++ ++D G+ DA E ++ + + ++FTYT ++ G C EG +D+A Q+ M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
E KGC P+ Y + G + + + K M KG + + T LI F
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 120/241 (49%)
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
Q +A+ ++ M+ LPS + + L++ K+KK D ++L + G++ D+ T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
L+ FC++ P A + M K G PD +T+ +++G + EA+S+ ++ +M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ + +Y+ ++D LC G + A F ++ G++ DV YT +V GLC G DA
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
+ LL M ++ P+ T+N + ++ G +E+ M + + T LIN
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 561 F 561
F
Sbjct: 292 F 292
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 301 bits (772), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 169/493 (34%), Positives = 266/493 (53%), Gaps = 48/493 (9%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R+ L + + +L+ DA +D F +M P P+I +FT L++++ KM Y ISL ++M
Sbjct: 52 RKILRNGLHNLQFNDA-LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ 110
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
LGI T IV++C+C S+ C LG M K+G EPD+VT T++
Sbjct: 111 ILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSL----------- 159
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+NG C AI F ++ G GFK +V YT ++
Sbjct: 160 ------------------------LNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLI 195
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKG 266
LCK+ +N A+ L+++M G +P+VVTYN L GL C G+ ++K+
Sbjct: 196 RCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL--CEIGRWGDAAWLLRDMMKRR 253
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
I P+V TF+A++D + K G + A+ L M ++ V P+VFTY SLIN C+ + +A
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
+++ M GC P+ V Y TLIHG+CK K+++ M + EM KG+ + T+ L+ G+
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
C G P A+E+ + M PD TY ++LDGL +A+ ++ + K +D +I
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
Y+I++ G+C G+++DA + F L +KG+K +V TYT M+ G CR GL+ +A+ L
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 507 MEEKGCPPNDCTY 519
M+E G PN+ Y
Sbjct: 494 MKEDGFLPNESVY 506
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 180/356 (50%), Gaps = 8/356 (2%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN------CLTRG--LFHCSRGKVL 263
+T ++ + K + + L+ +M GI P + T N CL+ C GK++
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
K G PD+ TF+++++ YC I A L + +G +PNV TY +LI C +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
A+++++ M G P+ VTYN L+ G C+I + A LL +M+ + + P++ T+ AL+
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
F K G + AKEL + M + PD TY +++GL EA ++ +E+
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+ IY+ ++ G C R++D + F + KG+ + TYT+++QG C G D A+++
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M + PP+ TYN+ + GL G + ++ + M+ + + T ++I
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQ 441
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 183/368 (49%), Gaps = 13/368 (3%)
Query: 204 GFKFDVPVYTAIMDSLCKDGL----VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR 259
GF F + +++ L ++GL N+AL L++ M P ++ + L + +R
Sbjct: 40 GFCFWIRAFSSYRKIL-RNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNR 98
Query: 260 GKVLKK--------GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
V+ GI P + T + ++ C RA +G M ++G EP++ T+ S
Sbjct: 99 YDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTS 158
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
L+N +C ++++DA+ ++D ++ G P+ VTY TLI CK + ++ A+ L +M G
Sbjct: 159 LLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNG 218
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV 431
P++ T+NALV G C+ G A L+ M K P+ IT+ ++D K EA
Sbjct: 219 SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAK 278
Query: 432 SLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGL 491
LY + +M++ + Y +++GLC YG L +AR+ F ++ G + YT ++ G
Sbjct: 279 ELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Query: 492 CREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADA 551
C+ ++D ++ +M +KG N TY + +QG G +++ M + D
Sbjct: 339 CKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDI 398
Query: 552 TTTELLIN 559
T +L++
Sbjct: 399 RTYNVLLD 406
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 168/478 (35%), Positives = 274/478 (57%), Gaps = 48/478 (10%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R L + + D++ +D A+ F MA PFP+I EF+ L++ + KM + IS ++M
Sbjct: 47 REVLRTGLSDIE-LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
LGI + +T+ I+INC CR SR L +LG M K+G EPDIVTL +++NG C +
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 157 QALGLAMRMDEMGYRCNSYT-----------------------------------HGAII 181
A+ L +M EMGY+ ++ T +GA++
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
NGLCK G+T A+ K+E + +V +Y+ ++DSLCK ++AL L++EM KG++
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 242 PDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
P+V+TY+ L L C+ G+ ++++ I P++ TFSA++D + K+G + +AE
Sbjct: 286 PNVITYSSLISCL--CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
+L M + ++PN+FTY+SLIN C+ D++ +A ++ + MI K CLP+ VTYNTLI+G+
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK K++DK M L EM +GL + T+ L+ GF +A A+ + M G P+
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNI 463
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFF 469
+TY I+LDGL K +A+ ++ L++ ++ I Y+IM++G+C G+ K +F
Sbjct: 464 LTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 189 bits (481), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 215/441 (48%), Gaps = 8/441 (1%)
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
+ G+M + P I+ + +++ + + + +M+ +G N YT+ +IN C
Sbjct: 65 LFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFC 124
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
+ S A+ K+ G++ D+ ++++ C +++A+ L +M G +PD V
Sbjct: 125 RCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV 184
Query: 246 TYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
T+ L GLF ++ +++++G PD+ T+ A+V+ CK G A L+ M
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
+E NV Y+++I++ C DA+ ++ M KG P+ +TY++LI C +
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
A LL +M+ + + P++ T++AL+ F K G + A++L M K P+ TY+ +
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
++G EA + + + + ++ Y+ +++G C R+ E F + +GL
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGL 424
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
+ TYT ++ G + D+A+ + M G PN TYN+ + GL + G ++++
Sbjct: 425 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMV 484
Query: 538 YLQLMKGKGFSADATTTELLI 558
+ ++ D T ++I
Sbjct: 485 VFEYLQRSTMEPDIYTYNIMI 505
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 189/362 (52%), Gaps = 8/362 (2%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK------ 265
Y ++ + D +++A+GL+ M P ++ ++ L + ++ ++
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 266 --GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
GI +++T++ +++ +C+ ++ A L+G M ++G EP++ T NSL+N C +++
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
DA+ + D M+ G P TVT+ TLIHG K +A++L+ MV +G PD+ T+ A+V
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
G CK G A L++ M+ + + Y+ ++D L K +A++L+ E+E +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
++ YS ++ LC+YGR DA S + + + ++ T++ ++ ++G L AE+L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSG 563
+M ++ PN TY+ + G + +++ L+LM K + T LIN F
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 564 NK 565
K
Sbjct: 406 AK 407
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 188/388 (48%), Gaps = 8/388 (2%)
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
+++ + K+ I + +K+E G ++ Y +++ C+ ++ AL L +M G
Sbjct: 84 LLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLG 143
Query: 240 IQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
+PD+VT N L G H +R ++++ G PD TF+ ++ + A
Sbjct: 144 YEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
L+ M + G +P++ TY +++N C + A+ + + M + V Y+T+I
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK + D A++L EM NKG+ P++ T+++L+ C G A L+S M + P+
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNL 323
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
+T++ ++D K +A LY E+ K ++D +I YS +++G C RL +A++
Sbjct: 324 VTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLEL 383
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
+ K +V TY ++ G C+ +D +L +M ++G N TY + G + D
Sbjct: 384 MIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARD 443
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLIN 559
++ + M G + T +L++
Sbjct: 444 CDNAQMVFKQMVSVGVHPNILTYNILLD 471
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 188/387 (48%), Gaps = 11/387 (2%)
Query: 193 AIGYFK-KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
AIG F + R F + ++ ++ ++ K + + +M GI ++ TYN L
Sbjct: 62 AIGLFGVMAQSRPFP-SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 252 RGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
CSR GK++K G PD+ T +++++ +C I+ A L+ M +G +
Sbjct: 121 NCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYK 180
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P+ T+ +LI+ L ++ +A+ + D M+ +GC P VTY +++G CK D A++L
Sbjct: 181 PDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNL 240
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
L +M + ++ ++ ++ CK A L + M+ G P+ ITY+ ++ L
Sbjct: 241 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 300
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
+ +A L ++ + ++ ++ +S ++D G+L A + + + + + ++FT
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFT 360
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
Y+ ++ G C L +A+Q+L M K C PN TYN + G + + + + + M
Sbjct: 361 YSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 544 GKGFSADATT-TELLINFFSGNKADNT 569
+G + T T L+ FF DN
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNA 447
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 170/484 (35%), Positives = 258/484 (53%), Gaps = 50/484 (10%)
Query: 41 LSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGI 100
S+ R ++ +D F KM P P+I +F+ +++ + K K+Y ISL M GI
Sbjct: 41 FSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGI 100
Query: 101 EADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALG 160
D +++ IVINC LC AL
Sbjct: 101 GHDLYSYNIVINC-----------------------------------LCRCSRFVIALS 125
Query: 161 LAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
+ +M + GY + T ++ING C+ AI K+E GF+ DV +Y I+D C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPD 270
K GLVN+A+ L+ M G++ D VTYN L GL C G+ ++ + I+P+
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL--CCSGRWSDAARLMRDMVMRDIVPN 243
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
V TF+A++D + KEG + A +L M R V+P+VFTYNSLIN C+ ++ +A ++ D
Sbjct: 244 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 303
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
M+ KGCLP VTYNTLI+G+CK K++D+ L EM +GL D T+N ++ G+ +AG
Sbjct: 304 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 363
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
P AA+E+ S M P+ TY+I+L GL +A+ L+ ++K ++ IT Y+
Sbjct: 364 RPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 420
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
I++ G+C G ++DA + F L KGLK DV +YT M+ G CR+ D ++ L M+E
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 480
Query: 511 GCPP 514
G P
Sbjct: 481 GLLP 484
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 201/425 (47%), Gaps = 30/425 (7%)
Query: 137 PDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY 196
P IV + +++ + N + + L M+ G + Y++ +IN LC+ A+
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH 256
K+ G++ DV +++++ C+ V +A+ L S+M G +PDVV YN
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN-------- 178
Query: 257 CSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH 316
I+D CK G++ A L M R GV + TYNSL+
Sbjct: 179 -------------------TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 317 CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
C + DA ++ M+ + +P+ +T+ +I + K K +AM L EM + + PD+
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
T+N+L+ G C G AK+++ M G LPD +TY +++G K E L+RE
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
+ + L Y+ ++ G GR A+E FS + ++ ++ TY+I++ GLC
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWR 396
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTEL 556
++ A L +M++ + TYN+ + G+ + G++ + + + KG D +
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456
Query: 557 LINFF 561
+I+ F
Sbjct: 457 MISGF 461
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 151/308 (49%), Gaps = 1/308 (0%)
Query: 261 KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
K+++ +P + FS ++ K L M G+ ++++YN +IN C
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+ A+ V M+ G P VT ++LI+G+C+ ++ A+ L+ +M G PD+ +N
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
++ G CK G+ A EL M++ G D +TY ++ GL + +A L R++
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
++ ++ ++ ++D G+ +A + + + + + DVFTY ++ GLC G +D+A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN- 559
+Q+L M KGC P+ TYN + G + + K + M +G D T +I
Sbjct: 299 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 358
Query: 560 FFSGNKAD 567
+F + D
Sbjct: 359 YFQAGRPD 366
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%)
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+++ + ++ MI LPS V ++ ++ K K D +SL M G+ D+ ++N
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
++ C+ + A ++ M K G PD +T + +++G + + +A+ L ++E+M
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ IY+ ++DG C G + DA E F ++ G++ D TY +V GLC G DA
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+L+ DM + PN T+ + ++ G S + K + M + D T LIN
Sbjct: 229 ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLIN 287
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 175/491 (35%), Positives = 260/491 (52%), Gaps = 43/491 (8%)
Query: 38 RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS 97
RE L + D A F +M P P+I +FT ++ ++ KM + I L +M +
Sbjct: 48 RERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMEN 107
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
LGI D ++FTI+I+C CR SR L +LG M K+G P IVTL
Sbjct: 108 LGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTL--------------- 152
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
G+++NG C+ A+ ++G GF +V +Y +++
Sbjct: 153 --------------------GSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVIN 192
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMP 269
LCK+ +N AL ++ M KGI+ D VTYN L GL + R ++K+ I P
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+V F+A++D + KEG + A L M R V PNVFTYNSLIN C+ + DA ++
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
D M+ KGC P VTYNTLI G+CK K+++ M L EM +GL D T+N L+ G+C+A
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
G A+++ + M G PD +TY I+LD L +A+ + +L+K +D I Y
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
+I++ GLC +LK+A F L KG+K D Y M+ GLCR+GL +A++L M+E
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492
Query: 510 KGCPPNDCTYN 520
G P++ Y+
Sbjct: 493 DGFMPSERIYD 503
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 169/322 (52%), Gaps = 10/322 (3%)
Query: 243 DVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV 302
D+V Y L+H K+ GI D+++F+ ++ +C+ ++ A L+G M ++G
Sbjct: 96 DIVIY------LYH----KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGF 145
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
P++ T SL+N C ++ Q+A+ + DSM G +P+ V YNT+I+G CK + ++ A+
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
+ M KG+ D T+N L+ G +G A L+ M K P+ I + ++D
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVF 482
K EA +LY+E+ + ++ ++ Y+ +++G C +G L DA+ F + +KG DV
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 483 TYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
TY ++ G C+ ++D +L +M +G + TYN + G + G ++ ++K M
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM 385
Query: 543 KGKGFSADATTTELLINFFSGN 564
G S D T +L++ N
Sbjct: 386 VDCGVSPDIVTYNILLDCLCNN 407
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 167/356 (46%), Gaps = 8/356 (2%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVL 263
+T ++ + K + + L+ +M GI D+ ++ L CSR GK++
Sbjct: 82 FTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM 141
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
K G P + T ++++ +C+ A L+ M G PNV YN++IN C +
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
+A++V+ M KG VTYNTLI G + A LL +MV + + P++ + AL+
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
F K G L A+ L M + +P+ TY +++G +A ++ +
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+ Y+ ++ G C R++D + F + +GL D FTY ++ G C+ G L+ A+++
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M + G P+ TYN+ + L G I ++ ++ ++ D T ++I
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQ 437
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 28/268 (10%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN+ FT LI+ VK + A +L K M + + FT+ +IN GFC+
Sbjct: 252 PNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN----------GFCI 301
Query: 127 LG----------LMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
G LM G PD+VT T++ G C VE + L M G +++T
Sbjct: 302 HGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT 361
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
+ +I+G C+ G + A F ++ G D+ Y ++D LC +G + +AL + ++
Sbjct: 362 YNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQ 421
Query: 237 GKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDVHTFSAIVDNYCKEGMIA 288
+ D++TYN + +GL + K + +KG+ PD + ++ C++G+
Sbjct: 422 KSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQR 481
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAH 316
A++L M G P+ Y+ + H
Sbjct: 482 EADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 2/246 (0%)
Query: 316 HCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
HC++ DA ++ M+ +PS V + ++ K+ K D + L +M N G++ D
Sbjct: 56 HCIK--FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD 113
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
+ ++ L+ FC+ A L+ M K G P +T +L+G + + + EAVSL
Sbjct: 114 LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
++ ++ IY+ +++GLC L +A E F ++ KG++ D TY ++ GL G
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 496 LLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTE 555
DA +LL DM ++ PN + + ++ G++ + + M + + T
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 556 LLINFF 561
LIN F
Sbjct: 294 SLINGF 299
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 120/262 (45%)
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P++ + ++ ++ + +Y M G ++ LIH +C+ ++ A++L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
LG+M+ G P I T +L+ GFC+ A L+ +M G +P+ + Y +++GL K
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
A+ ++ +EK + Y+ ++ GL + GR DA + + + +V
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
+T ++ +EG L +A L +M + PN TYN + G G + ++ LM
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 544 GKGFSADATTTELLINFFSGNK 565
KG D T LI F +K
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSK 338
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%)
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A L M + +P + + +L + K + + + LY ++E + + + ++I++
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIH 122
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
C RL A + G + + T ++ G C+ +A L+ M+ G P
Sbjct: 123 CFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP 182
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
N YN + GL + D++ + + M+ KG ADA T LI+ S +
Sbjct: 183 NVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNS 232
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 244/468 (52%), Gaps = 28/468 (5%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
+ ++ DA FF +M P P+I +FT L+ ++ Y T I ++M GI D
Sbjct: 47 LHSIRFEDAFALFF-EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHD 105
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
++FTI+I+C CR SR VLG M K+G EP IVT ++++G C + A L +
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
M + GY N + +I+GLCK G + A+ ++E +G DV Y ++ LC G
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCK 283
++A + +M + I PDVV TF+A++D + K
Sbjct: 226 RWSDAARMLRDMMKRSINPDVV---------------------------TFTALIDVFVK 258
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
+G + A+ L M + V+PN TYNS+IN C+ ++ DA K +D M KGC P+ VT
Sbjct: 259 QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVT 318
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
YNTLI G+CK + +D+ M L M +G DI T+N L+ G+C+ G A ++ M
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
PD IT+ I+L GL A+ + ++ + I Y+IM+ GLC +++
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
A E F L +G+K D TYTIM+ GLC+ G +A++L+ M+E+G
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 195/420 (46%), Gaps = 12/420 (2%)
Query: 137 PDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY 196
P IV T ++ E + + +M+ G + Y+ +I+ C+ S A+
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH 256
K+ G++ + + +++ C + +A L M G +P+VV YN L GL
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGL-- 186
Query: 257 CSRGKV----------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
C G++ KKG+ DV T++ ++ C G + A R++ M + + P+V
Sbjct: 187 CKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDV 246
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
T+ +LI+ Q + +A ++Y MI P+ VTYN++I+G C ++ A
Sbjct: 247 VTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDL 306
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M +KG P++ T+N L+ GFCK M +L M G D TY ++ G +
Sbjct: 307 MASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGK 366
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
A+ ++ + + I + I+L GLC G ++ A F ++ I + Y I
Sbjct: 367 LRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNI 426
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
M+ GLC+ ++ A +L + +G P+ TY + + GL + G +++ ++ MK +G
Sbjct: 427 MIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 177/341 (51%), Gaps = 8/341 (2%)
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIV 278
+A L+ EM P +V + L + R K+ GI D+++F+ ++
Sbjct: 54 DAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+C+ ++ A ++G M ++G EP++ T+ SL++ CL +++ DA + M+ G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+ V YNTLI G CK +++ A+ LL EM KGL D+ T+N L+ G C +G A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+ M K PD +T+ ++D K EA LY+E+ + ++D + Y+ +++GLC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
+GRL DA++ F + +KG +V TY ++ G C+ ++D+ +L M +G + T
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFT 353
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
YN + G + G + + M + + D T +L++
Sbjct: 354 YNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLH 394
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 125/258 (48%)
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P++ + L+ A + + + M G ++ LIH +C+ ++ A+S+
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
LG+M+ G P I T+ +L+ GFC A L+ M K G P+ + Y ++DGL K
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
A+ L E+EK L + Y+ +L GLC GR DA + + + DV T
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
+T ++ ++G LD+A++L +M + PN+ TYN + GL G + ++K LM
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 544 GKGFSADATTTELLINFF 561
KG + T LI+ F
Sbjct: 309 SKGCFPNVVTYNTLISGF 326
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 117/239 (48%)
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+ +DA ++ M++ LPS V + L+ +++ + + +M G++ D+ ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
L+ FC+ A ++ M K G P +T+ +L G + +A SL + K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ ++ +Y+ ++DGLC G L A E + ++ KGL DV TY ++ GLC G DA
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
++L DM ++ P+ T+ + +++G++ +++ + M + T +IN
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/479 (34%), Positives = 249/479 (51%), Gaps = 29/479 (6%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R L S + +K DA + F MA +P P+I +F+ L+ + K+ Y ISL + +
Sbjct: 48 RERLRSGLHSIKFNDA-LTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
LGI D ++FT +I+C CR +R L LG M K+G EP IVT ++VNG C
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+A+ L ++ +GY N + II+ LC+ G + A+ K ++ G + DV Y +++
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSA 276
L G + + S+M GI PDV+ TFSA
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVI---------------------------TFSA 259
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
++D Y KEG + A++ M + V PN+ TYNSLIN C+ + +A KV + ++ KG
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
P+ VTYNTLI+G+CK K++D M +L M G+ D T+N L G+C+AG AA+
Sbjct: 320 FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
+++ M G PD T+ I+LDGL +A+ +L+K I Y+I++ GL
Sbjct: 380 KVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGL 439
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME-EKGCPP 514
C +++DA F L KG+ DV TY M+ GL R+ L +A +L M+ E G P
Sbjct: 440 CKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 209/423 (49%), Gaps = 15/423 (3%)
Query: 137 PDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY 196
P IV + ++ + E + L ++ +G + Y+ +I+ C+ S A+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH 256
K+ GF+ + + ++++ C EA+ L ++ G G +P+VV YN + L
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSL-- 194
Query: 257 CSRGKV----------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
C +G+V K GI PDV T+++++ G + R++ M R+G+ P+V
Sbjct: 195 CEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDV 254
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
T+++LI+ + + Q+ +A K Y+ MI + P+ VTYN+LI+G C +D+A +L
Sbjct: 255 ITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNV 314
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
+V+KG P+ T+N L+ G+CKA +++ M + G D TY + G +
Sbjct: 315 LVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGK 374
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+ A + + + + ++I+LDGLC +G++ A LQ + + TY I
Sbjct: 375 FSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNI 434
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRS--EKYLQLMKG 544
+++GLC+ ++DA L + KG P+ TY + G LRR + R E Y ++ K
Sbjct: 435 IIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIG-LRRKRLWREAHELYRKMQKE 493
Query: 545 KGF 547
G
Sbjct: 494 DGL 496
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 179/342 (52%), Gaps = 8/342 (2%)
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK--------GIMPDVHTFSAI 277
N+AL L+ +M P +V ++ L + ++ + + GI D+++F+ +
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTL 120
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
+D +C+ ++ A +G M ++G EP++ T+ SL+N C ++ +AM + D ++ G
Sbjct: 121 IDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGY 180
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
P+ V YNT+I C+ +++ A+ +L M G+ PD+ T+N+L+ +G +
Sbjct: 181 EPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSAR 240
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
++S M + G PD IT++ ++D K EA Y E+ + +++ +I Y+ +++GLC
Sbjct: 241 ILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLC 300
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC 517
+G L +A++ + L +KG + TY ++ G C+ +DD ++L M G +
Sbjct: 301 IHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTF 360
Query: 518 TYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
TYN QG + G S +EK L M G D T +L++
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLD 402
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 125/280 (44%), Gaps = 35/280 (12%)
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+ DA+ ++ M LPS V ++ L+ K+ K + +SL + G++ D+ ++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
L+ FC+ A + M K G P +T+ +++G + + EA+SL ++ +
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC-------- 492
+ ++ IY+ ++D LC G++ A + ++ G++ DV TY ++ L
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 493 ---------------------------REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQG 525
+EG L +A++ +M ++ PN TYN + G
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 526 LLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNK 565
L G + ++K L ++ KGF +A T LIN + K
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAK 338
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/490 (32%), Positives = 256/490 (52%), Gaps = 47/490 (9%)
Query: 38 RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS 97
RE+L + +D ++D F M P P+I +F+ L++ + KMK Y I L ++M
Sbjct: 50 REMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM 109
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
LGI + T I++NC C +
Sbjct: 110 LGIPHNLCTCNILLNC-----------------------------------FCRCSQLSL 134
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
AL +M ++G+ + T G+++NG C+ A+ F ++ G G+K +V +Y I+D
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIID 194
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGI 267
LCK V+ AL L + M GI PDVVTYN L GL CS G+ + K+ I
Sbjct: 195 GLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL--CSSGRWSDATRMVSCMTKREI 252
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
PDV TF+A++D KEG ++ AE M R ++P++ TY+ LI C+ ++ +A +
Sbjct: 253 YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEE 312
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
++ M+ KGC P VTY+ LI+G+CK KK++ M L EM +G+ + T+ L+ G+C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
+AG A+E+ M G P+ ITY ++L GL +A+ + +++K +D I
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 448 IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
Y+I++ G+C G + DA + + L +GL D++TYT M+ GL ++GL +A+ L M
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Query: 508 EEKGCPPNDC 517
+E G PN+C
Sbjct: 493 KEDGILPNEC 502
Score = 188 bits (478), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 166/299 (55%)
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
GI ++ T + +++ +C+ ++ A +G M ++G EP++ T+ SL+N C D++ DA
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
+ ++D M+ G P+ V YNT+I G CK K++D A+ LL M G+ PD+ T+N+L+ G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
C +G A ++S M K PD T+ ++D K EA Y E+ + +LD
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
I YS+++ GLC Y RL +A E F + +KG DV TY+I++ G C+ ++ +L
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
+M ++G N TY + +QG R G ++ +E+ + M G + T +L++ N
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDN 409
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 128/262 (48%)
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P++ ++ L++A + + +++ M G + T N L++ +C+ ++ A+S
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
LG+M+ G P I T+ +L+ GFC+ A + M G P+ + Y I+DGL K
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
A+ L +EK + + Y+ ++ GLCS GR DA S + + + DVFT
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
+ ++ +EG + +AE+ +M + P+ TY+L + GL + +E+ M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 544 GKGFSADATTTELLINFFSGNK 565
KG D T +LIN + +K
Sbjct: 319 SKGCFPDVVTYSILINGYCKSK 340
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 121/238 (50%)
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
++ D++ ++ M+ LPS ++ L+ K+KK D + L +M G+ ++CT N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
L+ FC+ A + M K G P +T+ +L+G + +A+ ++ ++ M
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
++ IY+ ++DGLC ++ +A + + ++ G+ DV TY ++ GLC G DA
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
+++ M ++ P+ T+N + ++ G +S +E++ + M + D T LLI
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 2/175 (1%)
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
+L M + LP ++ +L + K Y + L+ +++ + + ++ +I+L+
Sbjct: 67 DLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCF 126
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
C +L A F + G + + T+ ++ G CR + DA + M G PN
Sbjct: 127 CRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNV 186
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF--SGNKADNT 569
YN + GL + + + L M+ G D T LI+ SG +D T
Sbjct: 187 VIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/521 (28%), Positives = 253/521 (48%), Gaps = 14/521 (2%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A F+ KM + F N + L+ V+M+ A ++ M G + + I++
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
LCR +L M + L PD+ + T++ G C +E+AL LA M G
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ T G +I+ CK G A+G+ K+++ G + D+ VYT+++ C G ++ L+
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMPDVHTFSAIVDNYC 282
E+ +G P +TYN L RG C G++ +++G+ P+V+T++ ++D C
Sbjct: 271 DEVLERGDSPCAITYNTLIRGF--CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLC 328
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
G A +L+ M EPN TYN +IN C + DA+++ + M + P +
Sbjct: 329 GVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNI 388
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKG--LTPDICTWNALVGGFCKAGMPLAAKELIS 400
TYN L+ G C +D+A LL M+ PD+ ++NAL+ G CK A ++
Sbjct: 389 TYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD 448
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
+ + DR+T I+L+ K +A+ L++++ + R+ Y+ M+DG C G
Sbjct: 449 LLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTG 508
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
L A+ ++ L+ VF Y ++ LC+EG LD A +L +M+ P+ ++N
Sbjct: 509 MLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ + G L+ GDI +E L M G S D T LIN F
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRF 609
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 138/527 (26%), Positives = 247/527 (46%), Gaps = 14/527 (2%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
AV +M + P++ + +I + K A+ L M G T+ I+I+
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
C+ + D L M MGLE D+V T+++ G C G +++ L + E G
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ T+ +I G CK+G A F+ + RG + +V YT ++D LC G EAL L
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLL 340
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL----------KKGIMPDVHTFSAIVDNYC 282
+ M K +P+ VTYN + L C G V K+ PD T++ ++ C
Sbjct: 341 NLMIEKDEEPNAVTYNIIINKL--CKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 283 KEGMIARAERLMGFMARVG--VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
+G + A +L+ M + +P+V +YN+LI+ C ++++ A+ +YD ++ K
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
VT N L++ K ++KAM L ++ + + + T+ A++ GFCK GM AK L+
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M+ P Y +L L K +A L+ E+++ N + ++IM+DG G
Sbjct: 519 KMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
+K A G+ GL D+FTY+ ++ + G LD+A M + G P+ +
Sbjct: 579 DIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICD 638
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKAD 567
++ + +G+ + + ++ + K D T ++++ + A+
Sbjct: 639 SVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSAN 685
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 134/514 (26%), Positives = 225/514 (43%), Gaps = 53/514 (10%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
K ++ A++ N+M ++ + +LI+ K A+ +K M +G+EAD +
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
T +I C D G + + + G P +T T++ G C G +++A + M E
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G R N YT+ +I+GLC VG T A+ + + + + Y I++ LCKDGLV +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM------------PDVHTFS 275
A+ + M + +PD +TYN L GL C++G + + + PDV +++
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGL--CAKGDLDEASKLLYLMLKDSSYTDPDVISYN 428
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN----------AHCLQDQMQDA 325
A++ CKE + +A + + + T N L+N A L Q+ D+
Sbjct: 429 ALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDS 488
Query: 326 MKVYDSMIY----------------KGCL---------PSTVTYNTLIHGWCKIKKMDKA 360
V +S Y KG L PS YN L+ CK +D+A
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
L EM PD+ ++N ++ G KAG +A+ L+ M + G PD TY+ +++
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINR 608
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
K + EA+S + ++ + I +L S G E L K + +D
Sbjct: 609 FLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668
Query: 481 -VFTYTIMVQGLCREGLLDDAEQLLM---DMEEK 510
T T+M +D A++LL D EE+
Sbjct: 669 KELTCTVMDYMCNSSANMDLAKRLLRVTDDKEER 702
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 95/212 (44%), Gaps = 4/212 (1%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LL+S V+ A++ + +++ N +T +I+ K A L+ +M
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
++ F + +++ LC+ D + + M + PD+V+ +++G G+++ A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L + M G + +T+ +IN K+G AI +F K+ GF+ D + +++
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
G ++ +E+ K + D+V LT
Sbjct: 645 ISQGETDK----LTELVKKLVDKDIVLDKELT 672
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 235/464 (50%), Gaps = 15/464 (3%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLA 162
D T +I CRL +T +L ++ G PD++T +++G C G + AL +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV- 194
Query: 163 MRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKD 222
+D M + T+ I+ LC G A+ ++ R DV YT ++++ C+D
Sbjct: 195 --LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 223 GLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMPDVH 272
V A+ L EM +G PDVVTYN L G+ C G++ G P+V
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI--CKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
T + I+ + C G AE+L+ M R G P+V T+N LIN C + + A+ + + M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
GC P++++YN L+HG+CK KKMD+A+ L MV++G PDI T+N ++ CK G
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIM 452
A E+++ + G P ITY ++DGL K +A+ L E+ +L YS +
Sbjct: 431 EDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSL 490
Query: 453 LDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGC 512
+ GL G++ +A +FF + G++ + T+ ++ GLC+ D A L+ M +GC
Sbjct: 491 VGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGC 550
Query: 513 PPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTEL 556
PN+ +Y + ++GL G + + L + KG ++ ++
Sbjct: 551 KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQV 594
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 126/446 (28%), Positives = 224/446 (50%), Gaps = 32/446 (7%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ + V+I+ K A+S++ RM + D T+ ++ LC + V
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L M + PD++T T ++ C + V A+ L M + G + T+ ++NG+CK
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G AI + + G + +V + I+ S+C G +A L ++M KG P VVT
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346
Query: 247 YNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
+N L ++ C++G++ RA ++ M + G +PN
Sbjct: 347 FNIL---------------------------INFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
+YN L++ C + +M A++ + M+ +GC P VTYNT++ CK K++ A+ +L +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
+ +KG +P + T+N ++ G KAG A +L+ M+ PD ITY+ ++ GL +
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 427 YPEAVSLYRELEKMNLDRH-ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
EA+ + E E+M + + +T SIML GLC + A +F + +G K + +YT
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIML-GLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKG 511
I+++GL EG+ +A +LL ++ KG
Sbjct: 559 ILIEGLAYEGMAKEALELLNELCNKG 584
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 187/377 (49%), Gaps = 20/377 (5%)
Query: 204 GFKF-----------DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
GFKF D+ T ++ C+ G +A + + G G PDV+TYN +
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMIS 180
Query: 253 GLFHCSRGKVL-------KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
G +C G++ + + PDV T++ I+ + C G + +A ++ M + P+
Sbjct: 181 G--YCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
V TY LI A C + AMK+ D M +GC P VTYN L++G CK ++D+A+ L
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
+M + G P++ T N ++ C G + A++L++ M + G P +T+ I+++ L +
Sbjct: 299 DMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
A+ + ++ + + Y+ +L G C ++ A E+ + ++G D+ TY
Sbjct: 359 LLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYN 418
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
M+ LC++G ++DA ++L + KGC P TYN + GL + G ++ K L M+ K
Sbjct: 419 TMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 546 GFSADATTTELLINFFS 562
D T L+ S
Sbjct: 479 DLKPDTITYSSLVGGLS 495
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 181/377 (48%), Gaps = 12/377 (3%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
+L S+ D + A++ ++M + +P++ +T+LI + A+ L+ M G
Sbjct: 210 ILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRG 269
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
D T+ +++N +C+ R D L M G +P+++T I+ +C+ G A
Sbjct: 270 CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAE 329
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M G+ + T +IN LC+ G AI +K+ G + + Y ++
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMP 269
CK+ ++ A+ M +G PD+VTYN + L C GKV KG P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTAL--CKDGKVEDAVEILNQLSSKGCSP 447
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+ T++ ++D K G +A +L+ M ++P+ TY+SL+ + ++ +A+K +
Sbjct: 448 VLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF 507
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
G P+ VT+N+++ G CK ++ D+A+ L M+N+G P+ ++ L+ G
Sbjct: 508 HEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYE 567
Query: 390 GMPLAAKELISTMQKHG 406
GM A EL++ + G
Sbjct: 568 GMAKEALELLNELCNKG 584
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 191/400 (47%), Gaps = 32/400 (8%)
Query: 187 VGNTSAAIGY-----FKKVEGRGFKFDVPVYTA-------IMDSLCKDGLVNEALGLWSE 234
V +SA G+ F + RG K DV T+ + S ++ LV + S+
Sbjct: 5 VSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLV--LVSAASK 62
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVD----NYCKEGMIARA 290
+ G+ + L+ G + S G G V++ A+ D N+ ++ M+
Sbjct: 63 VESSGLNGRAQKFETLSSG-YSNSNGN----GHYSSVNSSFALEDVESNNHLRQ-MVRTG 116
Query: 291 ERLMGF-----MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYN 345
E GF M G P++ +LI C + + A K+ + + G +P +TYN
Sbjct: 117 ELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYN 176
Query: 346 TLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH 405
+I G+CK +++ A+S+L M ++PD+ T+N ++ C +G A E++ M +
Sbjct: 177 VMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233
Query: 406 GQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDA 465
PD ITY I+++ + A+ L E+ + Y+++++G+C GRL +A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293
Query: 466 REFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQG 525
+F + + + G + +V T+ I+++ +C G DAE+LL DM KG P+ T+N+ +
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 526 LLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNK 565
L R+G + R+ L+ M G ++ + L++ F K
Sbjct: 354 LCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 140/323 (43%), Gaps = 27/323 (8%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A+ F N M + PN+ +++ + + A L+ M G TF I
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 349
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+IN LCR +L M + G +P+ ++ +++G C E +++A+ RM G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ T+ ++ LCK G A+ ++ +G + Y ++D L K G +A+
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
L EM K ++PD +TY+ L GL +EG +
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGL---------------------------SREGKVDE 502
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
A + R+G+ PN T+NS++ C Q A+ MI +GC P+ +Y LI
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 350 GWCKIKKMDKAMSLLGEMVNKGL 372
G +A+ LL E+ NKGL
Sbjct: 563 GLAYEGMAKEALELLNELCNKGL 585
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 100/193 (51%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
K +D A+++ +M + +P+I + ++ + K A+ ++ ++ S G T+
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
VI+ L + +T +L M L+PD +T +++V GL EG V++A+ +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
MG R N+ T +I+ GLCK T AI + + RG K + YT +++ L +G+ E
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 228 ALGLWSEMTGKGI 240
AL L +E+ KG+
Sbjct: 573 ALELLNELCNKGL 585
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 149/522 (28%), Positives = 254/522 (48%), Gaps = 9/522 (1%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V AV+ F +M + P + + +++++V ++ A + RM GI D ++FTI
Sbjct: 92 VQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTI 151
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+ C+ SR +L M G E ++V T+V G E + L +M G
Sbjct: 152 RMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASG 211
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
T ++ LCK G+ KV RG ++ Y + LC+ G ++ A+
Sbjct: 212 VSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAV 271
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNY 281
+ + +G +PDV+TYN L GL S+ GK++ +G+ PD +T++ ++ Y
Sbjct: 272 RMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGY 331
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
CK GM+ AER++G G P+ FTY SLI+ C + + A+ +++ + KG P+
Sbjct: 332 CKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNV 391
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
+ YNTLI G + +A L EM KGL P++ T+N LV G CK G A L+
Sbjct: 392 ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKV 451
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
M G PD T+ I++ G A+ + + +D + Y+ +L+GLC +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNL 521
+D E + + KG ++FT+ I+++ LCR LD+A LL +M+ K P+ T+
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGT 571
Query: 522 FVQGLLRRGDISRSEKYLQLM-KGKGFSADATTTELLINFFS 562
+ G + GD+ + + M + S+ T ++I+ F+
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 144/511 (28%), Positives = 250/511 (48%), Gaps = 13/511 (2%)
Query: 55 DFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCL 114
+ F KM A + F L+ ++ K L+ ++ G+ + FT+ + I L
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGL 261
Query: 115 CRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNS 174
C+ D ++G + + G +PD++T ++ GLC ++A +M G +S
Sbjct: 262 CQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDS 321
Query: 175 YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
YT+ +I G CK G A GF D Y +++D LC +G N AL L++E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIMPDVHTFSAIVDNYCKE 284
GKGI+P+V+ YN L +GL ++G +L+ KG++P+V TF+ +V+ CK
Sbjct: 382 ALGKGIKPNVILYNTLIKGL--SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKM 439
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G ++ A+ L+ M G P++FT+N LI+ + Q +M++A+++ D M+ G P TY
Sbjct: 440 GCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTY 499
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
N+L++G CK K + M MV KG P++ T+N L+ C+ A L+ M+
Sbjct: 500 NSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKN 559
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM-NLDRHITIYSIMLDGLCSYGRLK 463
PD +T+ ++DG K A +L+R++E+ + Y+I++ +
Sbjct: 560 KSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVT 619
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
A + F + + L D +TY +MV G C+ G ++ + L++M E G P+ T +
Sbjct: 620 MAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVI 679
Query: 524 QGLLRRGDISRSEKYLQLMKGKGFSADATTT 554
L + + + M KG +A T
Sbjct: 680 NCLCVEDRVYEAAGIIHRMVQKGLVPEAVNT 710
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 221/419 (52%), Gaps = 14/419 (3%)
Query: 152 EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV 211
+G V++A+ + RMD +++ AI++ L G A + ++ RG DV
Sbjct: 89 KGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYS 148
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR---------GKV 262
+T M S CK + AL L + M+ +G + +VV Y C G F+ GK+
Sbjct: 149 FTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAY-CTVVGGFYEENFKAEGYELFGKM 207
Query: 263 LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
L G+ + TF+ ++ CK+G + E+L+ + + GV PN+FTYN I C + ++
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
A+++ +I +G P +TYN LI+G CK K +A LG+MVN+GL PD T+N L
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH--FYPEAVSLYRELEKM 440
+ G+CK GM A+ ++ +G +PD+ TY ++DGL CH A++L+ E
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGL--CHEGETNRALALFNEALGK 385
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ ++ +Y+ ++ GL + G + +A + + + KGL +V T+ I+V GLC+ G + DA
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+ L+ M KG P+ T+N+ + G + + + + L +M G D T L+N
Sbjct: 446 DGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLN 504
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 129/466 (27%), Positives = 212/466 (45%), Gaps = 28/466 (6%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D AV + P P++ + LI + K + A + +M + G+E DS+T+
Sbjct: 267 LDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNT 326
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I C+ L ++G G PD T ++++GLC EG +AL L G
Sbjct: 327 LIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKG 386
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ N + +I GL G A ++ +G +V + +++ LCK G V++A
Sbjct: 387 IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDAD 446
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
GL M KG PD+ T+N L G Y + +
Sbjct: 447 GLVKVMISKGYFPDIFTFNILIHG---------------------------YSTQLKMEN 479
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
A ++ M GV+P+V+TYNSL+N C + +D M+ Y +M+ KGC P+ T+N L+
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
C+ +K+D+A+ LL EM NK + PD T+ L+ GFCK G A L M++ ++
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVS 599
Query: 410 DRI-TYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
TY II+ + A L++E+ L Y +M+DG C G + +F
Sbjct: 600 SSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKF 659
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
+ G + T ++ LC E + +A ++ M +KG P
Sbjct: 660 LLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 181/395 (45%), Gaps = 43/395 (10%)
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL-----TRGLF---HCSRGKV 262
VY M + + G V EA+ ++ M +P V +YN + G F H ++
Sbjct: 78 VYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM 137
Query: 263 LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVF--------------- 307
+GI PDV++F+ + ++CK A RL+ M+ G E NV
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197
Query: 308 --------------------TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
T+N L+ C + +++ K+ D +I +G LP+ TYN
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
I G C+ ++D A+ ++G ++ +G PD+ T+N L+ G CK A+ + M G
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
PD TY ++ G K A + + Y ++DGLC G A
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLL 527
F+ KG+K +V Y +++GL +G++ +A QL +M EKG P T+N+ V GL
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437
Query: 528 RRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ G +S ++ +++M KG+ D T +LI+ +S
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYS 472
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 160/377 (42%), Gaps = 28/377 (7%)
Query: 38 RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS 97
R L+ + + A+ FN+ PN+ + LI + A L M
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
G+ + TF I++N LC++ ++ +M G PDI T +++G + +E
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
AL + M + G + YT+ +++NGLCK + +K + +G ++ + +++
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAI 277
SLC+ ++EALGL EM K + PD V TF +
Sbjct: 540 SLCRYRKLDEALGLLEEMKNKSVNPDAV---------------------------TFGTL 572
Query: 278 VDNYCKEGMIARAERLMGFMARV-GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
+D +CK G + A L M V + TYN +I+A + + A K++ M+ +
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
P TY ++ G+CK ++ L EM+ G P + T ++ C A
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 397 ELISTMQKHGQLPDRIT 413
+I M + G +P+ +
Sbjct: 693 GIIHRMVQKGLVPEAVN 709
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 148/306 (48%), Gaps = 4/306 (1%)
Query: 254 LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI-ARAERLMGFMARVGVEPNVFTYNSL 312
+F+ R +V G + T+ ++++ G A E L+ VG Y
Sbjct: 26 MFNSMRKEV---GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGA 82
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
+ + + ++Q+A+ V++ M + C P+ +YN ++ D+A + M ++G+
Sbjct: 83 MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
TPD+ ++ + FCK P AA L++ M G + + Y ++ G ++ +F E
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
L+ ++ + ++ ++ +L LC G +K+ + + +G+ ++FTY + +QGLC
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262
Query: 493 REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
+ G LD A +++ + E+G P+ TYN + GL + +E YL M +G D+
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322
Query: 553 TTELLI 558
T LI
Sbjct: 323 TYNTLI 328
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 23/334 (6%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ + + + A N+M+ P ++ F +L+N + KM + A LVK M S G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
D FTF I+I+ + + +L +M G++PD+ T +++NGLC E +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
M E G N +T ++ LC+ A+G ++++ + D + ++D
Sbjct: 517 ETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGF 576
Query: 220 CKDGLVNEALGLWSEMT-GKGIQPDVVTYNCLTRG------------LFHCSRGKVLKKG 266
CK+G ++ A L+ +M + TYN + LF +++ +
Sbjct: 577 CKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQ----EMVDRC 632
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
+ PD +T+ +VD +CK G + + + M G P++ T +IN C++D++ +A
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
+ M+ KG +P V NT+ C + K + A
Sbjct: 693 GIIHRMVQKGLVPEAV--NTI----CDVDKKEVA 720
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 239 bits (610), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 154/512 (30%), Positives = 246/512 (48%), Gaps = 15/512 (2%)
Query: 59 KMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLS 118
KM+ P++ F VLI + + AI +++ M S G+ D TFT V+
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 119 RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM-DEMGYRCNSYTH 177
D + M + G V++ IV+G C EG VE AL M ++ G+ + YT
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 178 GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTG 237
++NGLCK G+ AI + G+ DV Y +++ LCK G V EA+ + +M
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMIT 358
Query: 238 KGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMPDVHTFSAIVDNYCKEGMI 287
+ P+ VTYN L L C +V KGI+PDV TF++++ C
Sbjct: 359 RDCSPNTVTYNTLISTL--CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNH 416
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
A L M G EP+ FTYN LI++ C + ++ +A+ + M GC S +TYNTL
Sbjct: 417 RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
I G+CK K +A + EM G++ + T+N L+ G CK+ A +L+ M GQ
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
PD+ TY +L + +A + + + + I Y ++ GLC GR++ A +
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM-EEKGCPPNDCTYNLFVQGL 526
+Q KG+ + Y ++QGL R+ +A L +M E+ PP+ +Y + +GL
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGL 656
Query: 527 LR-RGDISRSEKYLQLMKGKGFSADATTTELL 557
G I + +L + KGF + ++ +L
Sbjct: 657 CNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Score = 238 bits (607), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 154/537 (28%), Positives = 263/537 (48%), Gaps = 21/537 (3%)
Query: 39 ELLSSMRDLKTVDAAVDFFN---KMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRM 95
+LL S+R AA+ FN K +P P + E +L+ L + + +++ M
Sbjct: 52 KLLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYE-EILLRLG-RSGSFDDMKKILEDM 109
Query: 96 HSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF-KMGLEPDIVTLTTIVNGLCAEGN 154
S E + TF I+I + D V+ M + GL+PD ++N L +GN
Sbjct: 110 KSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLN-LLVDGN 168
Query: 155 VEQALGLA-MRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
+ + ++ +M G + + T +I LC+ AI + + G D +T
Sbjct: 169 SLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFT 228
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL---------- 263
+M ++G ++ AL + +M G V+ N + G C G+V
Sbjct: 229 TVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF--CKEGRVEDALNFIQEMS 286
Query: 264 -KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
+ G PD +TF+ +V+ CK G + A +M M + G +P+V+TYNS+I+ C ++
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
++A++V D MI + C P+TVTYNTLI CK ++++A L + +KG+ PD+CT+N+L
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 406
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
+ G C A EL M+ G PD TY +++D L EA+++ +++E
Sbjct: 407 IQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGC 466
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
R + Y+ ++DG C + ++A E F ++ G+ + TY ++ GLC+ ++DA Q
Sbjct: 467 ARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQ 526
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
L+ M +G P+ TYN + R GDI ++ +Q M G D T LI+
Sbjct: 527 LMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/486 (28%), Positives = 243/486 (50%), Gaps = 11/486 (2%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A+ M + P+ K FT ++ ++ A+ + ++M G + + ++++
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 113 CLCRLSRTDLGFCVLGLMFKM-GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYR 171
C+ R + + M G PD T T+VNGLC G+V+ A+ + M + GY
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 172 CNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGL 231
+ YT+ ++I+GLCK+G A+ ++ R + Y ++ +LCK+ V EA L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 232 WSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL--------KKGIMPDVHTFSAIVDNYCK 283
+T KGI PDV T+N L +GL +V KG PD T++ ++D+ C
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
+G + A ++ M G +V TYN+LI+ C ++ ++A +++D M G ++VT
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVT 507
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
YNTLI G CK ++++ A L+ +M+ +G PD T+N+L+ FC+ G A +++ M
Sbjct: 508 YNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
+G PD +TY ++ GL K A L R ++ ++ Y+ ++ GL +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 464 DAREFFSG-LQAKGLKIDVFTYTIMVQGLCREG-LLDDAEQLLMDMEEKGCPPNDCTYNL 521
+A F L+ D +Y I+ +GLC G + +A L+++ EKG P + +
Sbjct: 628 EAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYM 687
Query: 522 FVQGLL 527
+GLL
Sbjct: 688 LAEGLL 693
Score = 223 bits (567), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 148/513 (28%), Positives = 235/513 (45%), Gaps = 54/513 (10%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
L VD +D F P+ + ++NL+V +M GI+ D T
Sbjct: 138 LSVVDWMIDEFGLK------PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVST 191
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
F ++I LCR + +L M GL PD T TT++ G EG+++ AL + +M
Sbjct: 192 FNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV 251
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
E G C N S + I+ CK+G V
Sbjct: 252 EFG---------------CSWSNVSVNV--------------------IVHGFCKEGRVE 276
Query: 227 EALGLWSEMTGK-GIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMPDVHTFS 275
+AL EM+ + G PD T+N L GL C G V L++G PDV+T++
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGL--CKAGHVKHAIEIMDVMLQEGYDPDVYTYN 334
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK 335
+++ CK G + A ++ M PN TYN+LI+ C ++Q+++A ++ + K
Sbjct: 335 SVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSK 394
Query: 336 GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAA 395
G LP T+N+LI G C + AM L EM +KG PD T+N L+ C G A
Sbjct: 395 GILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEA 454
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
++ M+ G ITY ++DG K + EA ++ E+E + R+ Y+ ++DG
Sbjct: 455 LNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDG 514
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
LC R++DA + + +G K D +TY ++ CR G + A ++ M GC P+
Sbjct: 515 LCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPD 574
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
TY + GL + G + + K L+ ++ KG +
Sbjct: 575 IVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN 607
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 167/395 (42%), Gaps = 31/395 (7%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+S++ V+ A + + + P++ F LI + +++ A+ L + M S G
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG 430
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
E D FT+ ++I+ LC + D +L M G ++T T+++G C +A
Sbjct: 431 CEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAE 490
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ M+ G NS T+ +I+GLCK A ++ G K D Y +++
Sbjct: 491 EIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF 550
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVD 279
C+ G + +A + MT G +PD+VTY L GL
Sbjct: 551 CRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGL------------------------- 585
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG-CL 338
CK G + A +L+ + G+ YN +I + + +A+ ++ M+ +
Sbjct: 586 --CKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Query: 339 PSTVTYNTLIHGWCK-IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
P V+Y + G C + +A+ L E++ KG P+ + L G M +
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVK 703
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
L++ + + + + ++ GL K + +A++
Sbjct: 704 LVNMVMQKARFSEE--EVSMVKGLLKIRKFQDALA 736
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/320 (40%), Positives = 190/320 (59%), Gaps = 16/320 (5%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M + G PD+VT TT++NGLC EG V QAL L RM E G++ +G IINGLCK+G+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQ----PYGTIINGLCKMGD 56
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
T +A+ K+E K V +Y AI+D LCKDG A L++EM KGI PDV+TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 250 LTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR 299
+ C G+ ++++ I PDV TFSA+++ KEG ++ AE + G M R
Sbjct: 117 MIDSF--CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK 359
G+ P TYNS+I+ C QD++ DA ++ DSM K C P VT++TLI+G+CK K++D
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 360 AMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD 419
M + EM +G+ + T+ L+ GFC+ G AA++L++ M G P+ IT+ +L
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 420 GLFKCHFYPEAVSLYRELEK 439
L +A ++ +L+K
Sbjct: 295 SLCSKKELRKAFAILEDLQK 314
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 169/338 (50%), Gaps = 31/338 (9%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ FT L+N + A++LV RM +E + +IN LC++ T+ +
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRM----VEEGHQPYGTIINGLCKMGDTESALNL 63
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L M + ++ +V I++ LC +G+ A L M + G + T+ +I+ C+
Sbjct: 64 LSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G + A + + R DV ++A++++L K+G V+EA ++ +M +GI P +T
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 247 YNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
YN +++D +CK+ + A+R++ MA P+V
Sbjct: 184 YN---------------------------SMIDGFCKQDRLNDAKRMLDSMASKSCSPDV 216
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
T+++LIN +C ++ + M+++ M +G + +TVTY TLIHG+C++ +D A LL
Sbjct: 217 VTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNV 276
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
M++ G+ P+ T+ +++ C A ++ +QK
Sbjct: 277 MISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 151/319 (47%), Gaps = 9/319 (2%)
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDV------HTFSAIVDNYCKEGMIA 288
M G +PDVVT+ L GL C G+VL+ + D + I++ CK G
Sbjct: 1 MVETGCRPDVVTFTTLMNGL--CCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTE 58
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
A L+ M ++ +V YN++I+ C A ++ M KG P +TY+ +I
Sbjct: 59 SALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMI 118
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
+C+ + A LL +M+ + + PD+ T++AL+ K G A+E+ M + G
Sbjct: 119 DSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIF 178
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
P ITY ++DG K +A + + + + +S +++G C R+ + E
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLR 528
F + +G+ + TYT ++ G C+ G LD A+ LL M G PN T+ + L
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCS 298
Query: 529 RGDISRSEKYLQ-LMKGKG 546
+ ++ ++ L+ L K +G
Sbjct: 299 KKELRKAFAILEDLQKSEG 317
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 147/304 (48%), Gaps = 4/304 (1%)
Query: 262 VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
+++ G PDV TF+ +++ C EG + +A L+ M G +P Y ++IN C
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
+ A+ + M V YN +I CK A +L EM +KG+ PD+ T++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
++ FC++G A++L+ M + PD +T++ +++ L K EA +Y ++ +
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 442 LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE 501
+ Y+ M+DG C RL DA+ + +K DV T++ ++ G C+ +D+
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 502 QLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
++ +M +G N TY + G + GD+ ++ L +M G + + T + ++
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Query: 562 SGNK 565
K
Sbjct: 297 CSKK 300
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 127/282 (45%), Gaps = 27/282 (9%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
++A++ +KM + ++ + +I+ + K H+ A +L MH GI D T++ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
I+ CR R +L M + + PD+VT + ++N L EG V +A + M G
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
+ T+ ++I+G CK + A + + DV ++ +++ CK V+ +
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
++ EM +GI + VTY L G +C+ G + A
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHG---------------------------FCQVGDLDAA 270
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
+ L+ M GV PN T+ S++ + C + +++ A + + +
Sbjct: 271 QDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDL 312
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 234/495 (47%), Gaps = 32/495 (6%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A+ F+KM PN+ + LI+ K++ L++ M G+E + ++ +
Sbjct: 221 IDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNV 280
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
VIN LCR R VL M + G D VT T++ G C EGN QAL + M G
Sbjct: 281 VINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ T+ ++I+ +CK GN + A+ + ++ RG + YT ++D + G +NEA
Sbjct: 341 LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVD 279
+ EM G P VVTYN L G HC GK + +KG+ PDV ++S ++
Sbjct: 401 RVLREMNDNGFSPSVVTYNALING--HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
+C+ + A R+ M G++P+ TY+SLI C Q + ++A +Y+ M+ G P
Sbjct: 459 GFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPP 518
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
TY LI+ +C ++KA+ L EMV KG+ PD+ T++ L+ G K AK L+
Sbjct: 519 DEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
+ +P +TY +++ F VSL + G C
Sbjct: 579 LKLFYEESVPSDVTYHTLIENCSNIEF-KSVVSL-------------------IKGFCMK 618
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
G + +A + F + K K D Y IM+ G CR G + A L +M + G + T
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTV 678
Query: 520 NLFVQGLLRRGDISR 534
V+ L + G ++
Sbjct: 679 IALVKALHKEGKVNE 693
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 263/545 (48%), Gaps = 28/545 (5%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMK-HYTTAISLVKRMHSL 98
++ S L +D A+ + A P + + +++ ++ K + + A ++ K M
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
+ + FT+ I+I C D+ + M G P++VT T+++G C ++
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L M G N ++ +INGLC+ G ++ RG+ D Y ++
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIM 268
CK+G ++AL + +EM G+ P V+TY L + C G + + +G+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM--CKAGNMNRAMEFLDQMRVRGLC 377
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P+ T++ +VD + ++G + A R++ M G P+V TYN+LIN HC+ +M+DA+ V
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+ M KG P V+Y+T++ G+C+ +D+A+ + EMV KG+ PD T+++L+ GFC+
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
A +L M + G PD TY +++ +A+ L+ E+ + + +
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVT 557
Query: 449 YSIMLDGLCSYGRLKDAREFFSGL-QAKGLKIDVFTYTI--------------MVQGLCR 493
YS++++GL R ++A+ L + + DV +T+ +++G C
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617
Query: 494 EGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
+G++ +A+Q+ M K P+ YN+ + G R GDI ++ + M GF T
Sbjct: 618 KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Query: 554 TELLI 558
L+
Sbjct: 678 VIALV 682
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 136/470 (28%), Positives = 237/470 (50%), Gaps = 14/470 (2%)
Query: 102 ADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNG-LCAEGNVEQALG 160
+ S F +V+ RLS D ++ L G P +++ +++ + ++ N+ A
Sbjct: 132 STSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 161 LAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
+ M E N +T+ +I G C GN A+ F K+E +G +V Y ++D C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL----------KKGIMPD 270
K +++ L M KG++P++++YN + GL C G++ ++G D
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGL--CREGRMKEVSFVLTEMNRRGYSLD 309
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
T++ ++ YCKEG +A + M R G+ P+V TY SLI++ C M AM+ D
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
M +G P+ TY TL+ G+ + M++A +L EM + G +P + T+NAL+ G C G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
A ++ M++ G PD ++Y+ +L G + + EA+ + RE+ + + YS
Sbjct: 430 KMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYS 489
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
++ G C R K+A + + + GL D FTYT ++ C EG L+ A QL +M EK
Sbjct: 490 SLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEK 549
Query: 511 GCPPNDCTYNLFVQGLLRRGDISRSEK-YLQLMKGKGFSADATTTELLIN 559
G P+ TY++ + GL ++ +++ L+L + +D T L+ N
Sbjct: 550 GVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 134/513 (26%), Positives = 258/513 (50%), Gaps = 26/513 (5%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFC--VLGL 129
F +++ ++ A+S+V + G ++ V++ R S+ ++ F V
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIR-SKRNISFAENVFKE 195
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M + + P++ T ++ G C GN++ AL L +M+ G N T+ +I+G CK+
Sbjct: 196 MLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRK 255
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
+ + +G + ++ Y +++ LC++G + E + +EM +G D VTYN
Sbjct: 256 IDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNT 315
Query: 250 LTRGL-----FHCS---RGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
L +G FH + ++L+ G+ P V T+++++ + CK G + RA + M G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
+ PN TY +L++ + M +A +V M G PS VTYN LI+G C KM+ A+
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL 421
++L +M KGL+PD+ +++ ++ GFC++ A + M + G PD ITY+ ++ G
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
+ EA LY E+ ++ L Y+ +++ C G L+ A + + + KG+ DV
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ---------------GL 526
TY++++ GL ++ +A++LL+ + + P+D TY+ ++ G
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGF 615
Query: 527 LRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+G ++ +++ + M GK D T ++I+
Sbjct: 616 CMKGMMTEADQVFESMLGKNHKPDGTAYNIMIH 648
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 194/393 (49%), Gaps = 13/393 (3%)
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL-VNEALGLWSEMTGK 238
++ ++ A+ + GF V Y A++D+ + ++ A ++ EM
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 239 GIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
+ P+V TYN L RG C G K+ KG +P+V T++ ++D YCK I
Sbjct: 200 QVSPNVFTYNILIRGF--CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKID 257
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
+L+ MA G+EPN+ +YN +IN C + +M++ V M +G VTYNTLI
Sbjct: 258 DGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
G+CK +A+ + EM+ GLTP + T+ +L+ CKAG A E + M+ G
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
P+ TY ++DG + + EA + RE+ + Y+ +++G C G+++DA
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLR 528
++ KGL DV +Y+ ++ G CR +D+A ++ +M EKG P+ TY+ +QG
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCE 497
Query: 529 RGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ + + M G D T LIN +
Sbjct: 498 QRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 176/359 (49%), Gaps = 28/359 (7%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ SM ++ A++F ++M PN + +T L++ + + A +++ M+ G
Sbjct: 351 LIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNG 410
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
T+ +IN C + + VL M + GL PD+V+ +T+++G C +V++AL
Sbjct: 411 FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ M E G + ++ T+ ++I G C+ T A ++++ G D YTA++++
Sbjct: 471 RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAY 530
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM--------PDV 271
C +G + +AL L +EM KG+ PDVVTY+ L GL SR + K+ ++ P
Sbjct: 531 CMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSD 590
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
T+ +++N C + F + V SLI C++ M +A +V++S
Sbjct: 591 VTYHTLIEN-CSN---------IEFKSVV----------SLIKGFCMKGMMTEADQVFES 630
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
M+ K P YN +IHG C+ + KA +L EMV G T ALV K G
Sbjct: 631 MLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEG 689
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 1/228 (0%)
Query: 336 GCLPSTVTYNTLIHGWCKIKK-MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
G +P ++YN ++ + K+ + A ++ EM+ ++P++ T+N L+ GFC AG
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A L M+ G LP+ +TY ++DG K + L R + L+ ++ Y+++++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
GLC GR+K+ + + +G +D TY +++G C+EG A + +M G P
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ TY + + + G+++R+ ++L M+ +G + T L++ FS
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFS 391
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 238 bits (607), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 266/524 (50%), Gaps = 27/524 (5%)
Query: 52 AAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVI 111
A + F M + P + F V++ + +A+SL++ M G +S + +I
Sbjct: 200 VAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 112 NCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYR 171
+ L + +R + +L MF MG PD T ++ GLC + +A + RM G+
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 172 CNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGL 231
+ T+G ++NGLCK+G AA F ++ K ++ ++ ++ G +++A +
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAV 375
Query: 232 WSEM-TGKGIQPDVVTYNCLTRG------------LFHCSRGKVLKKGIMPDVHTFSAIV 278
S+M T GI PDV TYN L G + H R KG P+V++++ +V
Sbjct: 376 LSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR----NKGCKPNVYSYTILV 431
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
D +CK G I A ++ M+ G++PN +N LI+A C + ++ +A++++ M KGC
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK 491
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P T+N+LI G C++ ++ A+ LL +M+++G+ + T+N L+ F + G A++L
Sbjct: 492 PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKL 551
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY---SIMLDG 455
++ M G D ITY ++ GL + +A SL+ EKM D H +I+++G
Sbjct: 552 VNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLF---EKMLRDGHAPSNISCNILING 608
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
LC G +++A EF + +G D+ T+ ++ GLCR G ++D + ++ +G PP+
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
T+N + L + G + + L GF + T +L+
Sbjct: 669 TVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 141/502 (28%), Positives = 248/502 (49%), Gaps = 32/502 (6%)
Query: 38 RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS 97
+ L+ S+ V+ A+ +M + P+ + F +I + K A +V RM
Sbjct: 256 QTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI 315
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
G D T+ ++N LC++ R D L +++ +P+IV T+++G G ++
Sbjct: 316 RGFAPDDITYGYLMNGLCKIGRVD---AAKDLFYRIP-KPEIVIFNTLIHGFVTHGRLDD 371
Query: 158 ALGLAMRM-DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
A + M G + T+ ++I G K G A+ + +G K +V YT ++
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSA 276
D CK G ++EA + +EM+ G++P+ V +NCL
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCL-------------------------- 465
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
+ +CKE I A + M R G +P+V+T+NSLI+ C D+++ A+ + MI +G
Sbjct: 466 -ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
+ +TVTYNTLI+ + + ++ +A L+ EMV +G D T+N+L+ G C+AG A+
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKAR 584
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
L M + G P I+ I+++GL + EAV +E+ I ++ +++GL
Sbjct: 585 SLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
C GR++D F LQA+G+ D T+ ++ LC+ G + DA LL + E G PN
Sbjct: 645 CRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
Query: 517 CTYNLFVQGLLRRGDISRSEKY 538
T+++ +Q ++ + + R Y
Sbjct: 705 RTWSILLQSIIPQETLDRRRFY 726
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 165/359 (45%), Gaps = 48/359 (13%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVL 263
+ +M + C ++ AL L +MT G P+ V Y L L C+R ++
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
G +PD TF+ ++ CK I A +++ M G P+ TY L+N C ++
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRV- 338
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNAL 382
DA K + Y+ P V +NTLIHG+ ++D A ++L +MV G+ PD+CT+N+L
Sbjct: 339 DAAK---DLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
+ G+ K G+ A E++ M+ G P+
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPN-------------------------------- 423
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
+ Y+I++DG C G++ +A + + A GLK + + ++ C+E + +A +
Sbjct: 424 ---VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE 480
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ +M KGC P+ T+N + GL +I + L+ M +G A+ T LIN F
Sbjct: 481 IFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 9/293 (3%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
L +D A + N+M+A PN F LI+ K A+ + + M G + D +T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
F +I+ LC + +L M G+ + VT T++N G +++A L M
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
G + T+ ++I GLC+ G A F+K+ G +++ LC+ G+V
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIV 278
EA+ EM +G PD+VT+N L GL R K+ +GI PD TF+ ++
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
CK G + A L+ G PN T++ L+ + Q+ + D + Y++
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETL-DRRRFYNA 728
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/463 (29%), Positives = 238/463 (51%), Gaps = 9/463 (1%)
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+ ++N L R D V M + + P+I T +VNG C GNVE+A ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
E G + +T+ ++I G C+ + +A F ++ +G + + YT ++ LC ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIV 278
EA+ L+ +M P V TY L + L R ++ + GI P++HT++ ++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
D+ C + +A L+G M G+ PNV TYN+LIN +C + ++DA+ V + M +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+T TYN LI G+CK + KAM +L +M+ + + PD+ T+N+L+ G C++G +A L
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+S M G +PD+ TY ++D L K EA L+ LE+ ++ ++ +Y+ ++DG C
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK 544
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
G++ +A + +K + T+ ++ GLC +G L +A L M + G P T
Sbjct: 545 AGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVST 604
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ + LL+ GD + Q M G DA T I +
Sbjct: 605 DTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 147/524 (28%), Positives = 248/524 (47%), Gaps = 13/524 (2%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LL+S+ VD + +M PNI + ++N K+ + A V ++ G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
++ D FT+T +I C+ D F V M G + V T +++GLC +++A+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L ++M + T+ +I LC S A+ K++E G K ++ YT ++DSL
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL----------KKGIMP 269
C +A L +M KG+ P+V+TYN L G +C RG + + + P
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALING--YCKRGMIEDAVDVVELMESRKLSP 426
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+ T++ ++ YCK + +A ++ M V P+V TYNSLI+ C A ++
Sbjct: 427 NTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
M +G +P TY ++I CK K++++A L + KG+ P++ + AL+ G+CKA
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKA 545
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
G A ++ M LP+ +T+ ++ GL EA L ++ K+ L ++
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
+I++ L G A F + + G K D TYT +Q CREG L DAE ++ M E
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 510 KGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
G P+ TY+ ++G G + + L+ M+ G T
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Score = 228 bits (582), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 231/462 (50%), Gaps = 9/462 (1%)
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR 164
+T+ ++N C+L + + + + GL+PD T T+++ G C +++ A +
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNE 278
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
M G R N + +I+GLC A+ F K++ V YT ++ SLC
Sbjct: 279 MPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSER 338
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGL-----FHCSR---GKVLKKGIMPDVHTFSA 276
+EAL L EM GI+P++ TY L L F +R G++L+KG+MP+V T++A
Sbjct: 339 KSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNA 398
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
+++ YCK GMI A ++ M + PN TYN LI +C + + AM V + M+ +
Sbjct: 399 LINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLERK 457
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
LP VTYN+LI G C+ D A LL M ++GL PD T+ +++ CK+ A
Sbjct: 458 VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
+L ++++ G P+ + Y ++DG K EA + ++ N + ++ ++ GL
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
C+ G+LK+A + GL+ V T TI++ L ++G D A M G P+
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
TY F+Q R G + +E + M+ G S D T LI
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Score = 205 bits (521), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 142/575 (24%), Positives = 262/575 (45%), Gaps = 65/575 (11%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ +D A+D F KM FP ++ +TVLI + + + A++LVK M GI+ + T+
Sbjct: 302 RRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEG-------------- 153
T++I+ LC + + +LG M + GL P+++T ++NG C G
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 154 --------------------NVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
NV +A+G+ +M E + T+ ++I+G C+ GN +A
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 194 IGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
+ RG D YT+++DSLCK V EA L+ + KG+ P+VV Y L G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541
Query: 254 LFHCSRGKV----------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
+C GKV L K +P+ TF+A++ C +G + A L M ++G++
Sbjct: 542 --YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQ 599
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P V T LI+ A + M+ G P TY T I +C+ ++ A +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
+ +M G++PD+ T+++L+ G+ G A +++ M+ G P + T+ ++ L +
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 424 CHF------YPE------------AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDA 465
+ PE V L ++ + ++ + Y ++ G+C G L+ A
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 466 REFFSGLQA-KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
+ F +Q +G+ + ++ C+ ++A +++ DM G P + + +
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 525 GLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
GL ++G+ R Q + G+ D +++I+
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIID 874
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 236/539 (43%), Gaps = 67/539 (12%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
+ A + +M PN+ + LIN K A+ +V+ M S + ++ T+ +
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNEL 434
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
I C+ S VL M + + PD+VT ++++G C GN + A L M++ G
Sbjct: 435 IKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
+ +T+ ++I+ LCK A F +E +G +V +YTA++D CK G V+EA
Sbjct: 494 VPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHL 553
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV---------------------------- 262
+ +M K P+ +T+N L GL C+ GK+
Sbjct: 554 MLEKMLSKNCLPNSLTFNALIHGL--CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 263 -----------------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
L G PD HT++ + YC+EG + AE +M M GV P+
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK---------- 355
+FTY+SLI + Q A V M GC PS T+ +LI ++K
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 356 --------KMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH-G 406
+ D + LL +MV +TP+ ++ L+ G C+ G A+++ MQ++ G
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
P + + +L K + EA + ++ + + +++ GL G +
Sbjct: 792 ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGT 851
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQG 525
F L G D + I++ G+ ++GL++ +L ME+ GC + TY+L ++G
Sbjct: 852 SVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 177/362 (48%), Gaps = 30/362 (8%)
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK 264
+K + Y +++SL + GLV+E ++ EM L+
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDEMKQVYMEM---------------------------LE 211
Query: 265 KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQD 324
+ P+++T++ +V+ YCK G + A + + + G++P+ FTY SLI +C + +
Sbjct: 212 DKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDS 271
Query: 325 AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
A KV++ M KGC + V Y LIHG C +++D+AM L +M + P + T+ L+
Sbjct: 272 AFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIK 331
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL-FKCHFYPEAVSLYRELEKMNLD 443
C + A L+ M++ G P+ TY +++D L +C F L + LEK L
Sbjct: 332 SLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK-GLM 390
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
++ Y+ +++G C G ++DA + ++++ L + TY +++G C+ + A +
Sbjct: 391 PNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGV 449
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSG 563
L M E+ P+ TYN + G R G+ + + L LM +G D T +I+
Sbjct: 450 LNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCK 509
Query: 564 NK 565
+K
Sbjct: 510 SK 511
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 177/408 (43%), Gaps = 27/408 (6%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++ S+ K V+ A D F+ + PN+ +T LI+ K A ++++M S
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+S TF +I+ LC + + M K+GL+P + T T +++ L +G+ + A
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+M G + +++T+ I C+ G A K+ G D+ Y++++
Sbjct: 623 SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY 682
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK------------------ 261
G N A + M G +P T+ L + L GK
Sbjct: 683 GDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFD 742
Query: 262 --------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR-VGVEPNVFTYNSL 312
+++ + P+ ++ ++ C+ G + AE++ M R G+ P+ +N+L
Sbjct: 743 TVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNAL 802
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
++ C + +A KV D MI G LP + LI G K + ++ S+ ++ G
Sbjct: 803 LSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGY 862
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
D W ++ G K G+ A EL + M+K+G TY+++++G
Sbjct: 863 YEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 8/143 (5%)
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH--------ITIYSIMLDGLCSYGRLK 463
+ + I L + C +A+ + KMN D I Y+ +L+ L +G +
Sbjct: 141 VVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVD 200
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
+ ++ + + + +++TY MV G C+ G +++A Q + + E G P+ TY +
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 524 QGLLRRGDISRSEKYLQLMKGKG 546
G +R D+ + K M KG
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKG 283
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 266/544 (48%), Gaps = 18/544 (3%)
Query: 38 RELLSSMRD---LKTVDAAVDFFNKMAAI--NPFPNIKEFTVLINLVVKMKHYTTAISLV 92
+ L+SS + L D+ V FF+ + + + + F V ++V A +
Sbjct: 139 QSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVF 198
Query: 93 KRMHSLGIEADSFTFTIVINCLCR-LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCA 151
++M + G+ + + + L + +T V ++G+ ++ + +++ +C
Sbjct: 199 EKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQ 258
Query: 152 EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV 211
G +++A L + M+ GY + ++ ++NG C+ G + ++ +G K + +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL-------- 263
Y +I+ LC+ + EA +SEM +GI PD V Y L G C RG +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF--CKRGDIRAASKFFYE 376
Query: 264 --KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
+ I PDV T++AI+ +C+ G + A +L M G+EP+ T+ LIN +C
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
M+DA +V++ MI GC P+ VTY TLI G CK +D A LL EM GL P+I T+N+
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
+V G CK+G A +L+ + G D +TY ++D K +A + +E+
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 442 LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE 501
L I ++++++G C +G L+D + + + AKG+ + T+ +V+ C L A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 502 QLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ DM +G P+ TY V+G + ++ + Q MKGKGFS +T +LI F
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 562 SGNK 565
K
Sbjct: 677 LKRK 680
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 246/490 (50%), Gaps = 16/490 (3%)
Query: 86 TTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTI 145
TAI + + +G+ + ++ IVI+ +C+L R +L LM G PD+++ +T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 146 VNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGF 205
VNG C G +++ L M G + NSY +G+II LC++ + A F ++ +G
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 206 KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK- 264
D VYT ++D CK G + A + EM + I PDV+TY + G C G +++
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF--CQIGDMVEA 405
Query: 265 ---------KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
KG+ PD TF+ +++ YCK G + A R+ M + G PNV TY +LI+
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 316 HCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
C + + A ++ M G P+ TYN++++G CK +++A+ L+GE GL D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
T+ L+ +CK+G A+E++ M G P +T+ ++++G + L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
+ + + T ++ ++ C LK A + + ++G+ D TY +V+G C+
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 496 LLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTE 555
+ +A L +M+ KG + TY++ ++G L+R + + M+ +G +AD
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE--- 702
Query: 556 LLINFFSGNK 565
+ +FFS K
Sbjct: 703 -IFDFFSDTK 711
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 191/374 (51%), Gaps = 27/374 (7%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+ AA FF +M + + P++ +T +I+ ++ A L M G+E DS TFT
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+IN C+ F V M + G P++VT TT+++GLC EG+++ A L M ++G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ N +T+ +I+NGLCK GN A+ + E G D YT +MD+ CK G +++A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
+ EM GKG+QP +VT F+ +++ +C GM+
Sbjct: 547 EILKEMLGKGLQPTIVT---------------------------FNVLMNGFCLHGMLED 579
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
E+L+ +M G+ PN T+NSL+ +C+++ ++ A +Y M +G P TY L+
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
G CK + M +A L EM KG + + T++ L+ GF K L A+E+ M++ G
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 410 DRITYAIILDGLFK 423
D+ + D +K
Sbjct: 700 DKEIFDFFSDTKYK 713
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 210/424 (49%), Gaps = 12/424 (2%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ ++ ++N + L++ M G++ +S+ + +I LCR+ +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M + G+ PD V TT+++G C G++ A M + T+ AII+G C+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+G+ A F ++ +G + D +T +++ CK G + +A + + M G P+VVT
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 247 YNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
Y L GL C G ++ K G+ P++ T+++IV+ CK G I A +L+G
Sbjct: 459 YTTLIDGL--CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
G+ + TY +L++A+C +M A ++ M+ KG P+ VT+N L++G+C
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
++ LL M+ KG+ P+ T+N+LV +C AA + M G PD TY
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++ G K EA L++E++ ++ YS+++ G + +ARE F ++ +G
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 477 LKID 480
L D
Sbjct: 697 LAAD 700
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 189/398 (47%), Gaps = 12/398 (3%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN + +I L+ ++ A M GI D+ +T +I+ C+
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M + PD++T T I++G C G++ +A L M G +S T +ING CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G+ A + G +V YT ++D LCK+G ++ A L EM G+QP++ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 247 YNCLTRGLFHCSRGKVLKK----------GIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
YN + GL C G + + G+ D T++ ++D YCK G + +A+ ++
Sbjct: 494 YNSIVNGL--CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M G++P + T+N L+N CL ++D K+ + M+ KG P+ T+N+L+ +C
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+ A ++ +M ++G+ PD T+ LV G CKA A L M+ G TY++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
++ G K + EA ++ ++ + L I+ D
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 152/544 (27%), Positives = 266/544 (48%), Gaps = 18/544 (3%)
Query: 38 RELLSSMRD---LKTVDAAVDFFNKMAAI--NPFPNIKEFTVLINLVVKMKHYTTAISLV 92
+ L+SS + L D+ V FF+ + + + + F V ++V A +
Sbjct: 139 QSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVF 198
Query: 93 KRMHSLGIEADSFTFTIVINCLCR-LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCA 151
++M + G+ + + + L + +T V ++G+ ++ + +++ +C
Sbjct: 199 EKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQ 258
Query: 152 EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV 211
G +++A L + M+ GY + ++ ++NG C+ G + ++ +G K + +
Sbjct: 259 LGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI 318
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL-------- 263
Y +I+ LC+ + EA +SEM +GI PD V Y L G C RG +
Sbjct: 319 YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGF--CKRGDIRAASKFFYE 376
Query: 264 --KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
+ I PDV T++AI+ +C+ G + A +L M G+EP+ T+ LIN +C
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
M+DA +V++ MI GC P+ VTY TLI G CK +D A LL EM GL P+I T+N+
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNS 496
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
+V G CK+G A +L+ + G D +TY ++D K +A + +E+
Sbjct: 497 IVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKG 556
Query: 442 LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE 501
L I ++++++G C +G L+D + + + AKG+ + T+ +V+ C L A
Sbjct: 557 LQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAAT 616
Query: 502 QLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ DM +G P+ TY V+G + ++ + Q MKGKGFS +T +LI F
Sbjct: 617 AIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 676
Query: 562 SGNK 565
K
Sbjct: 677 LKRK 680
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/490 (28%), Positives = 246/490 (50%), Gaps = 16/490 (3%)
Query: 86 TTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTI 145
TAI + + +G+ + ++ IVI+ +C+L R +L LM G PD+++ +T+
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 146 VNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGF 205
VNG C G +++ L M G + NSY +G+II LC++ + A F ++ +G
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 206 KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK- 264
D VYT ++D CK G + A + EM + I PDV+TY + G C G +++
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGF--CQIGDMVEA 405
Query: 265 ---------KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
KG+ PD TF+ +++ YCK G + A R+ M + G PNV TY +LI+
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 316 HCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
C + + A ++ M G P+ TYN++++G CK +++A+ L+GE GL D
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD 525
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
T+ L+ +CK+G A+E++ M G P +T+ ++++G + L
Sbjct: 526 TVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLN 585
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
+ + + T ++ ++ C LK A + + ++G+ D TY +V+G C+
Sbjct: 586 WMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKAR 645
Query: 496 LLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTE 555
+ +A L +M+ KG + TY++ ++G L+R + + M+ +G +AD
Sbjct: 646 NMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKE--- 702
Query: 556 LLINFFSGNK 565
+ +FFS K
Sbjct: 703 -IFDFFSDTK 711
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 116/374 (31%), Positives = 191/374 (51%), Gaps = 27/374 (7%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+ AA FF +M + + P++ +T +I+ ++ A L M G+E DS TFT
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+IN C+ F V M + G P++VT TT+++GLC EG+++ A L M ++G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ N +T+ +I+NGLCK GN A+ + E G D YT +MD+ CK G +++A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
+ EM GKG+QP +VT F+ +++ +C GM+
Sbjct: 547 EILKEMLGKGLQPTIVT---------------------------FNVLMNGFCLHGMLED 579
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
E+L+ +M G+ PN T+NSL+ +C+++ ++ A +Y M +G P TY L+
Sbjct: 580 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 639
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
G CK + M +A L EM KG + + T++ L+ GF K L A+E+ M++ G
Sbjct: 640 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 699
Query: 410 DRITYAIILDGLFK 423
D+ + D +K
Sbjct: 700 DKEIFDFFSDTKYK 713
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 116/424 (27%), Positives = 210/424 (49%), Gaps = 12/424 (2%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ ++ ++N + L++ M G++ +S+ + +I LCR+ +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M + G+ PD V TT+++G C G++ A M + T+ AII+G C+
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+G+ A F ++ +G + D +T +++ CK G + +A + + M G P+VVT
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVT 458
Query: 247 YNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
Y L GL C G ++ K G+ P++ T+++IV+ CK G I A +L+G
Sbjct: 459 YTTLIDGL--CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
G+ + TY +L++A+C +M A ++ M+ KG P+ VT+N L++G+C
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
++ LL M+ KG+ P+ T+N+LV +C AA + M G PD TY
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++ G K EA L++E++ ++ YS+++ G + +ARE F ++ +G
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 696
Query: 477 LKID 480
L D
Sbjct: 697 LAAD 700
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 189/398 (47%), Gaps = 12/398 (3%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN + +I L+ ++ A M GI D+ +T +I+ C+
Sbjct: 314 PNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKF 373
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M + PD++T T I++G C G++ +A L M G +S T +ING CK
Sbjct: 374 FYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCK 433
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G+ A + G +V YT ++D LCK+G ++ A L EM G+QP++ T
Sbjct: 434 AGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFT 493
Query: 247 YNCLTRGLFHCSRGKVLKK----------GIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
YN + GL C G + + G+ D T++ ++D YCK G + +A+ ++
Sbjct: 494 YNSIVNGL--CKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M G++P + T+N L+N CL ++D K+ + M+ KG P+ T+N+L+ +C
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNN 611
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+ A ++ +M ++G+ PD T+ LV G CKA A L M+ G TY++
Sbjct: 612 LKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSV 671
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
++ G K + EA ++ ++ + L I+ D
Sbjct: 672 LIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSD 709
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 157/548 (28%), Positives = 270/548 (49%), Gaps = 15/548 (2%)
Query: 35 PKRRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKR 94
P LL S+ L A + +M A + ++ ++N + K + A + +
Sbjct: 161 PCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSK 220
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFK-MGLEPDIVTLTTIVNGLCAEG 153
+ +G DS T ++ CR V +M K + P+ V+ + +++GLC G
Sbjct: 221 ILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVG 280
Query: 154 NVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
+E+A GL +M E G + ++ T+ +I LC G A F ++ RG K +V YT
Sbjct: 281 RLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYT 340
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL---------- 263
++D LC+DG + EA G+ +M I P V+TYN L G +C G+V+
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING--YCKDGRVVPAFELLTVME 398
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
K+ P+V TF+ +++ C+ G +A L+ M G+ P++ +YN LI+ C + M
Sbjct: 399 KRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
A K+ SM P +T+ +I+ +CK K D A + LG M+ KG++ D T L+
Sbjct: 459 TAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
G CK G A ++ T+ K L + +ILD L K E +++ ++ K+ L
Sbjct: 519 DGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLV 578
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+ Y+ ++DGL G + + ++ G +V+ YTI++ GLC+ G +++AE+L
Sbjct: 579 PSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKL 638
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA-DATTTELLINFFS 562
L M++ G PN TY + V+G + G + R+ + ++ M +G+ D + LL F
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVL 698
Query: 563 GNKA-DNT 569
K DN+
Sbjct: 699 SQKGIDNS 706
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 150/605 (24%), Positives = 255/605 (42%), Gaps = 100/605 (16%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LL R L DA F + PN +++LI+ + ++ A L +M G
Sbjct: 237 LLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG 296
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ + T+T++I LC D F + M G +P++ T T +++GLC +G +E+A
Sbjct: 297 CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEAN 356
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
G+ +M + + T+ A+ING CK G A +E R K +V + +M+ L
Sbjct: 357 GVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG------KVLKK----GIMP 269
C+ G +A+ L M G+ PD+V+YN L GL C G K+L I P
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL--CREGHMNTAYKLLSSMNCFDIEP 474
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
D TF+AI++ +CK+G A +G M R G+ + T +LI+ C + +DA+ +
Sbjct: 475 DCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFIL 534
Query: 330 DS------------------MIYKGC-----------------LPSTVTYNTLIHGWCKI 354
++ M+ KGC +PS VTY TL+ G +
Sbjct: 535 ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRS 594
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
+ + +L M G P++ + ++ G C+ G A++L+S MQ G P+ +TY
Sbjct: 595 GDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTY 654
Query: 415 AIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG--LCSYGRLKDAREFFSGL 472
+++ G A+ R + + + + IYS +L G L G S +
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDI 714
Query: 473 QAKGLKIDVFTYTI----------------MVQGLCREGLLDDAEQLLMDMEEKG----- 511
+ + I +V LC+EG D++ L+ ++ E+G
Sbjct: 715 ALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK 774
Query: 512 ---------CP--------------------PNDCTYNLFVQGLLRRGDISRS-EKYLQL 541
C P+ ++ L +QGL + GD R+ E ++L
Sbjct: 775 AMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
Query: 542 MKGKG 546
+ G
Sbjct: 835 LTSNG 839
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/470 (25%), Positives = 201/470 (42%), Gaps = 79/470 (16%)
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G+R N + +++ L K+ A ++++E GF + Y I+++LCK+G A
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAA 214
Query: 229 LGLWSEMTGKGI------------------------------------QPDVVTYNCLTR 252
S++ G P+ V+Y+ L
Sbjct: 215 EMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274
Query: 253 GLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
GL R ++ +KG P T++ ++ C G+I +A L M G +P
Sbjct: 275 GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKP 334
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
NV TY LI+ C ++++A V M+ PS +TYN LI+G+CK ++ A LL
Sbjct: 335 NVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELL 394
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
M + P++ T+N L+ G C+ G P A L+ M +G PD ++Y +++DGL +
Sbjct: 395 TVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCRE 454
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
A L + +++ ++ +++ C G+ A F + KG+ +D T
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514
Query: 485 TIMVQGLCREGLLDDA------------------EQLLMDMEEKGCP------------- 513
T ++ G+C+ G DA +++DM KGC
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574
Query: 514 ----PNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
P+ TY V GL+R GDI+ S + L+LMK G + ++IN
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 149/518 (28%), Positives = 244/518 (47%), Gaps = 13/518 (2%)
Query: 56 FFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLC 115
KM P I + +++ K + AI L+ M S G++AD T+ ++I+ LC
Sbjct: 255 LMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLC 314
Query: 116 RLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSY 175
R +R G+ +L M K + P+ VT T++NG EG V A L M G N
Sbjct: 315 RSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
T A+I+G GN A+ F +E +G Y ++D LCK+ + A G + M
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 236 TGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYCKEG 285
G+ +TY + GL C G ++ K GI PD+ T+SA+++ +CK G
Sbjct: 435 KRNGVCVGRITYTGMIDGL--CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVG 492
Query: 286 MIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYN 345
A+ ++ + RVG+ PN Y++LI C +++A+++Y++MI +G T+N
Sbjct: 493 RFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFN 552
Query: 346 TLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH 405
L+ CK K+ +A + M + G+ P+ +++ L+ G+ +G L A + M K
Sbjct: 553 VLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV 612
Query: 406 GQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDA 465
G P TY +L GL K EA + L + +Y+ +L +C G L A
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 466 REFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG-CPPNDCTYNLFVQ 524
F + + + D +TYT ++ GLCR+G A + E +G PN Y FV
Sbjct: 673 VSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVD 732
Query: 525 GLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
G+ + G + + M G + D TT +I+ +S
Sbjct: 733 GMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYS 770
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 135/518 (26%), Positives = 242/518 (46%), Gaps = 22/518 (4%)
Query: 64 NPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLG 123
N P++ + +LI + ++ ++ + + M G +T ++ + +
Sbjct: 160 NSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 124 FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIING 183
+ L M K + PD+ T ++N LCAEG+ E++ L +M++ GY T+ +++
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 184 LCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
CK G AAI ++ +G DV Y ++ LC+ + + L +M + I P+
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 244 VVTYNCLTRGLFHCSRGKVL----------KKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
VTYN L G + GKVL G+ P+ TF+A++D + EG A ++
Sbjct: 338 EVTYNTLINGF--SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
M G+ P+ +Y L++ C + A Y M G +TY +I G CK
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 354 IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRIT 413
+D+A+ LL EM G+ PDI T++AL+ GFCK G AKE++ + + G P+ I
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 414 YAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT---IYSIMLDGLCSYGRLKDAREFFS 470
Y+ ++ + EA+ +Y E M L+ H +++++ LC G++ +A EF
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIY---EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMR 572
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
+ + G+ + ++ ++ G G A + +M + G P TY ++GL + G
Sbjct: 573 CMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632
Query: 531 DISRSEKYLQLMKGKGFSADATTTELLINFF--SGNKA 566
+ +EK+L+ + + D L+ SGN A
Sbjct: 633 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLA 670
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 232/524 (44%), Gaps = 43/524 (8%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+ +++ F M P++ ++ VVK + S +K M I D TF I
Sbjct: 179 IQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 238
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+IN LC + ++ M K G P IVT T+++ C +G + A+ L M G
Sbjct: 239 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKG 298
Query: 170 YRC-----------------------------------NSYTHGAIINGLCKVGNTSAAI 194
N T+ +ING G A
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358
Query: 195 GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
++ G + + A++D +G EAL ++ M KG+ P V+Y L GL
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418
Query: 255 -----FHCSRG---KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
F +RG ++ + G+ T++ ++D CK G + A L+ M++ G++P++
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
TY++LIN C + + A ++ + G P+ + Y+TLI+ C++ + +A+ +
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M+ +G T D T+N LV CKAG A+E + M G LP+ +++ +++G
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+A S++ E+ K+ Y +L GLC G L++A +F L A +D Y
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
++ +C+ G L A L +M ++ P+ TY + GL R+G
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/426 (27%), Positives = 210/426 (49%), Gaps = 13/426 (3%)
Query: 152 EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV 211
EG ++ +L + M G+ + YT AI+ + K G + + K++ R DV
Sbjct: 176 EGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 235
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK---------- 261
+ +++ LC +G ++ L +M G P +VTYN + ++C +G+
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH--WYCKKGRFKAAIELLDH 293
Query: 262 VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
+ KG+ DV T++ ++ + C+ IA+ L+ M + + PN TYN+LIN + +
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
+ A ++ + M+ G P+ VT+N LI G +A+ + M KGLTP ++
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
L+ G CK A+ M+++G RITY ++DGL K F EAV L E+ K
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDG 473
Query: 442 LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE 501
+D I YS +++G C GR K A+E + GL + Y+ ++ CR G L +A
Sbjct: 474 IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAI 533
Query: 502 QLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
++ M +G + T+N+ V L + G ++ +E++++ M G + + + LIN +
Sbjct: 534 RIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGY 593
Query: 562 SGNKAD 567
GN +
Sbjct: 594 -GNSGE 598
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 141/553 (25%), Positives = 236/553 (42%), Gaps = 48/553 (8%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A+ F M A P+ + VL++ + K + A RM G+ T+T +I+
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
LC+ D +L M K G++PDIVT + ++NG C G + A + R+ +G
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
N + +I C++G AI ++ + G D + ++ SLCK G V EA
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNYCKE 284
MT GI P+ V+++CL G + G ++ K G P T+ +++ CK
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G + AE+ + + V + YN+L+ A C + A+ ++ M+ + LP + TY
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 345 NTLIHGWCKIKKMDKAMSLLGE------------------------------------MV 368
+LI G C+ K A+ E M
Sbjct: 692 TSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMD 751
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
N G TPDI T NA++ G+ + G +L+ M P+ TY I+L G K
Sbjct: 752 NLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVS 811
Query: 429 EAVSLYRELEKMN--LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+ LYR + +N L +T +S++L G+C L+ + +G+++D +T+ +
Sbjct: 812 TSFLLYRSI-ILNGILPDKLTCHSLVL-GICESNMLEIGLKILKAFICRGVEVDRYTFNM 869
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
++ C G ++ A L+ M G + T + V L R S L M +G
Sbjct: 870 LISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQG 929
Query: 547 FSADATTTELLIN 559
S ++ LIN
Sbjct: 930 ISPESRKYIGLIN 942
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/623 (22%), Positives = 259/623 (41%), Gaps = 114/623 (18%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEA------- 102
+D AV N+M+ P+I ++ LIN K+ + TA +V R++ +G+
Sbjct: 459 LDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYST 518
Query: 103 ----------------------------DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMG 134
D FTF +++ LC+ + + M G
Sbjct: 519 LIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDG 578
Query: 135 LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAI 194
+ P+ V+ ++NG G +A + M ++G+ +T+G+++ GLCK G+ A
Sbjct: 579 ILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAE 638
Query: 195 GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
+ K + D +Y ++ ++CK G + +A+ L+ EM + I PD TY L GL
Sbjct: 639 KFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGL 698
Query: 255 FHC--------------SRGKVLKKGIM------------------------------PD 270
+RG VL +M PD
Sbjct: 699 CRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPD 758
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
+ T +A++D Y + G I + L+ M PN+ TYN L++ + + + + +Y
Sbjct: 759 IVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYR 818
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
S+I G LP +T ++L+ G C+ ++ + +L + +G+ D T+N L+ C G
Sbjct: 819 SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANG 878
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
A +L+ M G D+ T ++ L + H + E+ + E+ K + Y
Sbjct: 879 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938
Query: 451 IMLDGLCSYGRLKDA------------------REFFSGLQAKGLKID------------ 480
+++GLC G +K A AK K D
Sbjct: 939 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM 998
Query: 481 -----VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRS 535
+ ++T ++ C+ G + +A +L + M G + +YN+ + GL +GD++ +
Sbjct: 999 KLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALA 1058
Query: 536 EKYLQLMKGKGFSADATTTELLI 558
+ + MKG GF A+ATT + LI
Sbjct: 1059 FELYEEMKGDGFLANATTYKALI 1081
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 122/515 (23%), Positives = 232/515 (45%), Gaps = 14/515 (2%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A F++M + P + L+ + K H A +K +H++ D+ + ++
Sbjct: 602 AFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLT 661
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
+C+ + G M + + PD T T++++GLC +G A+ A + G
Sbjct: 662 AMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVL 721
Query: 173 -NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGL 231
N + ++G+ K G A I + ++++ G D+ A++D + G + + L
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 232 WSEMTGKGIQPDVVTYNCLTRGL---------FHCSRGKVLKKGIMPDVHTFSAIVDNYC 282
EM + P++ TYN L G F R +L GI+PD T ++V C
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILN-GILPDKLTCHSLVLGIC 840
Query: 283 KEGMIARAERLM-GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
+ M+ +++ F+ R GVE + +T+N LI+ C ++ A + M G
Sbjct: 841 ESNMLEIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 899
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
T + ++ + + ++ +L EM +G++P+ + L+ G C+ G A +
Sbjct: 900 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 959
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
M H P + + ++ L KC EA L R + KM L I ++ ++ C G
Sbjct: 960 MIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGN 1019
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNL 521
+ +A E + GLK+D+ +Y +++ GLC +G + A +L +M+ G N TY
Sbjct: 1020 VIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKA 1079
Query: 522 FVQGLL-RRGDISRSEKYLQLMKGKGFSADATTTE 555
++GLL R S ++ L+ + +GF + ++
Sbjct: 1080 LIRGLLARETAFSGADIILKDLLARGFITSMSLSQ 1114
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 163/386 (42%), Gaps = 8/386 (2%)
Query: 45 RDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADS 104
R KTV A + A N PN +T ++ + K + I ++M +LG D
Sbjct: 700 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR 164
T +I+ R+ + + +L M P++ T +++G +V + L
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 819
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
+ G + T +++ G+C+ + K RG + D + ++ C +G
Sbjct: 820 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGL-----FHCSR---GKVLKKGIMPDVHTFSA 276
+N A L MT GI D T + + L F SR ++ K+GI P+ +
Sbjct: 880 INWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIG 939
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
+++ C+ G I A + M + P ++++ A + +A + M+
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 999
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
+P+ ++ TL+H CK + +A+ L M N GL D+ ++N L+ G C G A
Sbjct: 1000 LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1059
Query: 397 ELISTMQKHGQLPDRITYAIILDGLF 422
EL M+ G L + TY ++ GL
Sbjct: 1060 ELYEEMKGDGFLANATTYKALIRGLL 1085
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 138/515 (26%), Positives = 253/515 (49%), Gaps = 8/515 (1%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
+R + +D + F + ++ P ++ + L++ +VK +H+ A+ L M S+GI D
Sbjct: 167 VRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPD 226
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
+ +T VI LC L ++ M G + +IV +++GLC + V +A+G+
Sbjct: 227 VYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKK 286
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
+ + + T+ ++ GLCKV + ++ F +++++ L K G
Sbjct: 287 DLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRG 346
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGL-----FHCSR---GKVLKKGIMPDVHTFS 275
+ EAL L + G+ P++ YN L L FH + ++ K G+ P+ T+S
Sbjct: 347 KIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYS 406
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK 335
++D +C+ G + A +G M G++ +V+ YNSLIN HC + A MI K
Sbjct: 407 ILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK 466
Query: 336 GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAA 395
P+ VTY +L+ G+C K++KA+ L EM KG+ P I T+ L+ G +AG+ A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
+L + M + P+R+TY ++++G + +A +E+ + + Y ++ G
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
LC G+ +A+ F GL +++ YT ++ G CREG L++A + +M ++G +
Sbjct: 587 LCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLD 646
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD 550
Y + + G L+ D L+ M +G D
Sbjct: 647 LVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPD 681
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/541 (26%), Positives = 259/541 (47%), Gaps = 18/541 (3%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++ S+ +LK + A + M A NI + VLI+ + K + A+ + K +
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
++ D T+ ++ LC++ ++G ++ M + P ++++V GL G +E+AL
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L R+ + G N + + A+I+ LCK A F ++ G + + Y+ ++D
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMP 269
C+ G ++ AL EM G++ V YN L G HC G + + K + P
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLING--HCKFGDISAAEGFMAEMINKKLEP 470
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
V T+++++ YC +G I +A RL M G+ P+++T+ +L++ ++DA+K++
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
+ M P+ VTYN +I G+C+ M KA L EM KG+ PD ++ L+ G C
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLT 590
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
G AK + + K + I Y +L G + EA+S+ +E+ + +D + Y
Sbjct: 591 GQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCY 650
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQA---KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
+++DG + KD + FF L+ +GLK D YT M+ + G +A +
Sbjct: 651 GVLIDGSLKH---KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKA 566
M +GC PN+ TY + GL + G ++ +E M+ + T ++ + +
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 567 D 567
D
Sbjct: 768 D 768
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/561 (25%), Positives = 254/561 (45%), Gaps = 49/561 (8%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ +R ++ A++ ++ PN+ + LI+ + K + + A L RM +G
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIG 397
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ + T++I+I+ CR + D LG M GL+ + +++NG C G++ A
Sbjct: 398 LRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAE 457
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
G M T+ +++ G C G + A+ + ++ G+G + +T ++ L
Sbjct: 458 GFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL 517
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIMP 269
+ GL+ +A+ L++EM ++P+ VTYN + G +C G + K KGI+P
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG--YCEEGDMSKAFEFLKEMTEKGIVP 575
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
D +++ ++ C G + A+ + + + E N Y L++ C + ++++A+ V
Sbjct: 576 DTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVC 635
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD-------------- 375
M+ +G V Y LI G K K LL EM ++GL PD
Sbjct: 636 QEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 376 ---------------------ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
T+ A++ G CKAG A+ L S MQ +P+++TY
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 415 AIILDGLFKCHF-YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
LD L K +AV L+ + K L + Y++++ G C GR+++A E + +
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 474 AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDIS 533
G+ D TYT M+ LCR + A +L M EKG P+ YN + G G++
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 534 RSEKYLQLMKGKGFSADATTT 554
++ + M +G + T+
Sbjct: 875 KATELRNEMLRQGLIPNNKTS 895
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 139/497 (27%), Positives = 230/497 (46%), Gaps = 44/497 (8%)
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMF-KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
F ++I R R G V +M K+ L P++ TL+ +++GL + A+ L M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
+G R + Y + +I LC++ + S A +E G ++ Y ++D LCK V
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGL--------------------FHCS------- 258
EA+G+ ++ GK ++PDVVTY L GL F S
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 259 ------RGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV 302
RGK V+ G+ P++ ++A++D+ CK AE L M ++G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
PN TY+ LI+ C + ++ A+ M+ G S YN+LI+G CK + A
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
+ EM+NK L P + T+ +L+GG+C G A L M G P T+ +L GLF
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVF 482
+ +AV L+ E+ + N+ + Y++M++G C G + A EF + KG+ D +
Sbjct: 519 RAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTY 578
Query: 483 TYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
+Y ++ GLC G +A+ + + + C N+ Y + G R G + + Q M
Sbjct: 579 SYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Query: 543 KGKGFSADATTTELLIN 559
+G D +LI+
Sbjct: 639 VQRGVDLDLVCYGVLID 655
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 158/387 (40%), Gaps = 82/387 (21%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LLS + + AV FN+MA N PN + V+I + + A +K M G
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKG 572
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
I D++++ +I+ LC + + + K E + + T +++G C EG +E+AL
Sbjct: 573 IVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEAL 632
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD----------- 208
+ M + G + +G +I+G K + G K++ RG K D
Sbjct: 633 SVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK 692
Query: 209 ---------------------VP---VYTAIMDSLCKDGLVNEALGLWSEMTG------- 237
VP YTA+++ LCK G VNEA L S+M
Sbjct: 693 SKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQ 752
Query: 238 ----------------------------KGIQPDVVTYNCLTRGLFHCSRGKV------- 262
KG+ + TYN L RG C +G++
Sbjct: 753 VTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF--CRQGRIEEASELI 810
Query: 263 ---LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQ 319
+ G+ PD T++ +++ C+ + +A L M G+ P+ YN+LI+ C+
Sbjct: 811 TRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVA 870
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNT 346
+M A ++ + M+ +G +P+ T T
Sbjct: 871 GEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 1/254 (0%)
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYK-GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
++ LI + ++ D + V+ MI K LP T + L+HG K + AM L +M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
V+ G+ PD+ + ++ C+ AKE+I+ M+ G + + Y +++DGL K
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 428 PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIM 487
EAV + ++L +L + Y ++ GLC + E + + +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 488 VQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
V+GL + G +++A L+ + + G PN YN + L + +E M G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 548 SADATTTELLINFF 561
+ T +LI+ F
Sbjct: 399 RPNDVTYSILIDMF 412
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 107/267 (40%), Gaps = 62/267 (23%)
Query: 333 IYKGCLPSTVTYNTLIHG-------W-----------------------------CKI-- 354
+++G ST ++ LIH W CK+
Sbjct: 96 LHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSS 155
Query: 355 --------------KKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKELI 399
+++ + + M+ K L P++ T +AL+ G K A EL
Sbjct: 156 SSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELF 215
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
+ M G PD Y ++ L + A + +E D +I Y++++DGLC
Sbjct: 216 NDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKK 275
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGC---PPND 516
++ +A L K LK DV TY +V GLC+ + + E L M+E C P++
Sbjct: 276 QKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK---VQEFEIGLEMMDEMLCLRFSPSE 332
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMK 543
+ V+GL +RG I E+ L L+K
Sbjct: 333 AAVSSLVEGLRKRGKI---EEALNLVK 356
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 245/498 (49%), Gaps = 12/498 (2%)
Query: 75 LINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMG 134
LI +V++ A + + + G+ + +T I++N LC+ + + L + + G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 135 LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAI 194
+ PDIVT T+++ ++G +E+A L M G+ YT+ +INGLCK G A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 195 GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
F ++ G D Y +++ CK G V E ++S+M + + PD+V ++ + L
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMM-SL 384
Query: 255 FHCSRG---------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
F S V + G++PD ++ ++ YC++GMI+ A L M + G +
Sbjct: 385 FTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
V TYN++++ C + + +A K+++ M + P + T LI G CK+ + AM L
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
+M K + D+ T+N L+ GF K G AKE+ + M LP I+Y+I+++ L
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG 564
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
EA ++ E+ N+ + I + M+ G C G D F + ++G D +Y
Sbjct: 565 HLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYN 624
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEK--GCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
++ G RE + A L+ MEE+ G P+ TYN + G R+ + +E L+ M
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 544 GKGFSADATTTELLINFF 561
+G + D +T +IN F
Sbjct: 685 ERGVNPDRSTYTCMINGF 702
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/527 (25%), Positives = 240/527 (45%), Gaps = 33/527 (6%)
Query: 66 FPNIKE----FTVLINLVVKMKHYTTAISLVKRM-HSLGIE----------------ADS 104
FPN K + +I+++V+ + A S + RM G+ ++
Sbjct: 106 FPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSND 165
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR 164
F ++I + + L+ G I ++ L G VE A G+
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQE 225
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
+ G N YT ++N LCK G + +V+ +G D+ Y ++ + GL
Sbjct: 226 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 285
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTF 274
+ EA L + M GKG P V TYN + GL C GK +L+ G+ PD T+
Sbjct: 286 MEEAFELMNAMPGKGFSPGVYTYNTVINGL--CKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+++ CK+G + E++ M V P++ ++S+++ + A+ ++S+
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
G +P V Y LI G+C+ + AM+L EM+ +G D+ T+N ++ G CK M
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 463
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A +L + M + PD T I++DG K A+ L++++++ + + Y+ +LD
Sbjct: 464 ADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLD 523
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
G G + A+E ++ + +K + +Y+I+V LC +G L +A ++ +M K P
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
N ++G R G+ S E +L+ M +GF D + LI F
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGF 630
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 225/473 (47%), Gaps = 14/473 (2%)
Query: 56 FFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLC 115
F +++ +P+I + LI+ A L+ M G +T+ VIN LC
Sbjct: 257 FLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLC 316
Query: 116 RLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSY 175
+ + + V M + GL PD T +++ C +G+V + + M +
Sbjct: 317 KHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLV 376
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
++++ + GN A+ YF V+ G D +YT ++ C+ G+++ A+ L +EM
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 236 TGKGIQPDVVTYNCLTRGLFHCSR----------GKVLKKGIMPDVHTFSAIVDNYCKEG 285
+G DVVTYN + GL C R ++ ++ + PD +T + ++D +CK G
Sbjct: 437 LQQGCAMDVVTYNTILHGL--CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Query: 286 MIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYN 345
+ A L M + +V TYN+L++ + A +++ M+ K LP+ ++Y+
Sbjct: 495 NLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYS 554
Query: 346 TLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH 405
L++ C + +A + EM++K + P + N+++ G+C++G + + M
Sbjct: 555 ILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE 614
Query: 406 GQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN--LDRHITIYSIMLDGLCSYGRLK 463
G +PD I+Y ++ G + +A L +++E+ L + Y+ +L G C ++K
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMK 674
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
+A + +G+ D TYT M+ G + L +A ++ +M ++G P+D
Sbjct: 675 EAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/504 (25%), Positives = 235/504 (46%), Gaps = 37/504 (7%)
Query: 96 HSLGIEADSFTFTIVINCLCRLSR-TDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAE-- 152
H + S + + +I+ L R R +D C+L ++ + G V+ IVN L +
Sbjct: 105 HFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSG-----VSRLEIVNSLDSTFS 159
Query: 153 --GNVEQALGLAMR-----------------MDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
G+ + L +R + G+ + A+I L ++G A
Sbjct: 160 NCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 194 IGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL--- 250
G ++++ G +V ++++LCKDG + + S++ KG+ PD+VTYN L
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 251 --TRGLFHCS---RGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
++GL + + KG P V+T++ +++ CK G RA+ + M R G+ P+
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
TY SL+ C + + + KV+ M + +P V +++++ + + +DKA+
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
+ GL PD + L+ G+C+ GM A L + M + G D +TY IL GL K
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
EA L+ E+ + L +I++DG C G L++A E F ++ K +++DV TY
Sbjct: 460 MLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYN 519
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
++ G + G +D A+++ DM K P +Y++ V L +G ++ + + M K
Sbjct: 520 TLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 546 GFSADATTTELLINFF--SGNKAD 567
+I + SGN +D
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASD 603
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 124/556 (22%), Positives = 241/556 (43%), Gaps = 80/556 (14%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ S+ + V+ A + +++ N+ +++N + K + + ++ G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ D T+ +I+ + F ++ M G P + T T++NGLC G E+A
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCK--------------------------------- 186
+ M G +S T+ +++ CK
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 187 --VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
GN A+ YF V+ G D +YT ++ C+ G+++ A+ L +EM +G DV
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 245 VTYNCLTRGLFHCSR----------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLM 294
VTYN + GL C R ++ ++ + PD +T + ++D +CK G + A L
Sbjct: 446 VTYNTILHGL--CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF 503
Query: 295 GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
M + +V TYN+L++ + A +++ M+ K LP+ ++Y+ L++ C
Sbjct: 504 QKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSK 563
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
+ +A + EM++K + P + N+++ G+C++G + + M G +PD I+Y
Sbjct: 564 GHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Query: 415 AIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
++ G + +A L +++E+ +
Sbjct: 624 NTLIYGFVREENMSKAFGLVKKMEE---------------------------------EQ 650
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
GL DVFTY ++ G CR+ + +AE +L M E+G P+ TY + G + + +++
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 535 SEKYLQLMKGKGFSAD 550
+ + M +GFS D
Sbjct: 711 AFRIHDEMLQRGFSPD 726
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 135/408 (33%), Positives = 209/408 (51%), Gaps = 15/408 (3%)
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
M N + +I LCK+ AI F+ + R D Y +MD LCK+ ++E
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDE 240
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIMPDVHTFSAI 277
A+ L EM +G P V YN L GL C +G + + KG +P+ T++ +
Sbjct: 241 AVLLLDEMQSEGCSPSPVIYNVLIDGL--CKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
+ C +G + +A L+ M PN TY +LIN Q + DA+++ SM +G
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
+ Y+ LI G K K ++AMSL +M KG P+I ++ LV G C+ G P AKE
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
+++ M G LP+ TY+ ++ G FK EAV +++E++K R+ YS+++DGLC
Sbjct: 419 ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLC 478
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM---EEKGCPP 514
GR+K+A +S + G+K D Y+ +++GLC G +D A +L +M EE P
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQP 538
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ TYN+ + GL + DISR+ L M +G D T +N S
Sbjct: 539 DVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLS 586
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 189/371 (50%), Gaps = 14/371 (3%)
Query: 206 KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG----IQPDVVTYNCLTRGL------- 254
K V + ++++ + +GL + L + + I P+ +++N + + L
Sbjct: 145 KRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVD 204
Query: 255 --FHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
RG +K +PD +T+ ++D CKE I A L+ M G P+ YN L
Sbjct: 205 RAIEVFRGMPERK-CLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
I+ C + + K+ D+M KGC+P+ VTYNTLIHG C K+DKA+SLL MV+
Sbjct: 264 IDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
P+ T+ L+ G K A L+S+M++ G ++ Y++++ GLFK EA+S
Sbjct: 324 IPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMS 383
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
L+R++ + +I +YS+++DGLC G+ +A+E + + A G + +TY+ +++G
Sbjct: 384 LWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 493 REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
+ GL ++A Q+ +M++ GC N Y++ + GL G + + M G D
Sbjct: 444 KTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503
Query: 553 TTELLINFFSG 563
+I G
Sbjct: 504 AYSSIIKGLCG 514
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/412 (27%), Positives = 189/412 (45%), Gaps = 50/412 (12%)
Query: 58 NKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRL 117
N +N PN F ++I + K++ AI + + M D +T+ +++ LC+
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 118 SRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN----------------------- 154
R D +L M G P V +++GLC +G+
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 155 ------------VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEG 202
+++A+ L RM N T+G +INGL K + A+ +E
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 203 RGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK- 261
RG+ + +Y+ ++ L K+G EA+ LW +M KG +P++V Y+ L GL C GK
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGL--CREGKP 413
Query: 262 ---------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
++ G +P+ +T+S+++ + K G+ A ++ M + G N F Y+ L
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV---N 369
I+ C ++++AM V+ M+ G P TV Y+++I G C I MD A+ L EM+
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL 421
PD+ T+N L+ G C A +L+++M G PD IT L+ L
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTL 585
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 172/406 (42%), Gaps = 67/406 (16%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D AV ++M + P+ + VLI+ + K T LV M G + T+
Sbjct: 238 IDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNT 297
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I+ LC + D +L M P+ VT T++NGL + A+ L M+E G
Sbjct: 298 LIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERG 357
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
Y N + + +I+GL K G A+ ++K+ +G K ++ VY+ ++D LC++G NEA
Sbjct: 358 YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAK 417
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFH------------------CSR------------ 259
+ + M G P+ TY+ L +G F CSR
Sbjct: 418 EILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGL 477
Query: 260 -------------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM---ARVGVE 303
K+L GI PD +S+I+ C G + A +L M +
Sbjct: 478 CGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ 537
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWC-KIKKMDKAMS 362
P+V TYN L++ C+Q + A+ + +SM+ +GC P +T NT ++ K DK S
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRS 597
Query: 363 LLGEMV--------------------NKGLTPDICTWNALVGGFCK 388
L E+V K L P TW +V CK
Sbjct: 598 FLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 143/508 (28%), Positives = 254/508 (50%), Gaps = 13/508 (2%)
Query: 49 TVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS-LGIEADSFTF 107
++ +A + F+ M I N++ F VL+N A+ +++RM S + D+ T+
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 108 TIVINCLCRLSR-TDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
++ + + R +DL +L M K GL P+ VT +V G C G++++A + M
Sbjct: 244 NTILKAMSKKGRLSDLKELLLD-MKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
+ + T+ +INGLC G+ + ++ + DV Y ++D + GL
Sbjct: 303 QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSL 362
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK---------GIMPDVHTFSAI 277
EA L +M G++ + VT+N + L + + + + G PD+ T+ +
Sbjct: 363 EARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTL 422
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
+ Y K G ++ A +M M + G++ N T N++++A C + ++ +A + +S +G
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGF 482
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
+ VTY TLI G+ + +K++KA+ + EM +TP + T+N+L+GG C G A E
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAME 542
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
+ + G LPD T+ I+ G K +A Y E K + +I+L+GLC
Sbjct: 543 KFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLC 602
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC 517
G + A FF+ L + ++D TY M+ C++ L +A LL +MEEKG P+
Sbjct: 603 KEGMTEKALNFFNTL-IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRF 661
Query: 518 TYNLFVQGLLRRGDISRSEKYLQLMKGK 545
TYN F+ L+ G +S +++ L+ GK
Sbjct: 662 TYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 128/472 (27%), Positives = 203/472 (43%), Gaps = 69/472 (14%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN + L+ K+ A +V+ M + D T+ I+IN LC G +
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
+ M + L+PD+VT T+++G G +A L +M+ G + N TH + LCK
Sbjct: 333 MDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCK 392
Query: 187 VGNTSAAIGYFKK-VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
A K+ V+ GF D+ Y ++ + K G ++ AL + EM KGI+ + +
Sbjct: 393 EEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTI 452
Query: 246 TYN------CLTRGL--FHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
T N C R L H K+G + D T+ ++ + +E + +A + M
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
+V + P V T+NSLI C + + AM+ +D + G LP T+N++I G+CK ++
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP------------------------- 392
+KA E + PD T N L+ G CK GM
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMI 632
Query: 393 ---------LAAKELISTMQKHGQLPDRITYAIIL------------DGLFKCHFYPEAV 431
A +L+S M++ G PDR TY + D L K F +
Sbjct: 633 SAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK-KFSGKFG 691
Query: 432 SLYRELE------------KMNLDRHITIYSIMLDGLCSYGRLKD-AREFFS 470
S+ R+L+ K L+ YS ++D LCS GRLK+ +R + S
Sbjct: 692 SMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSRSYTS 743
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 236/511 (46%), Gaps = 57/511 (11%)
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLC---AEGNVEQALGLAM 163
F I ++ + + + M ++ L+P+++T T++ GL + ++ A +
Sbjct: 134 FDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFD 193
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF--DVPVYTAIMDSLCK 221
M ++G N T ++NG C G A+G +++ FK D Y I+ ++ K
Sbjct: 194 DMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE-FKVNPDNVTYNTILKAMSK 252
Query: 222 DGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG---------KVLKK-GIMPDV 271
G +++ L +M G+ P+ VTYN L G +C G +++K+ ++PD+
Sbjct: 253 KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYG--YCKLGSLKEAFQIVELMKQTNVLPDL 310
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ-DAMKVYD 330
T++ +++ C G + LM M + ++P+V TYN+LI+ C + + +A K+ +
Sbjct: 311 CTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDG-CFELGLSLEARKLME 369
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN-KGLTPDICTWNALVGGFCKA 389
M G + VT+N + CK +K + + E+V+ G +PDI T++ L+ + K
Sbjct: 370 QMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKV 429
Query: 390 GMPLAAKE-----------------------------------LISTMQKHGQLPDRITY 414
G A E L+++ K G + D +TY
Sbjct: 430 GDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTY 489
Query: 415 AIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
++ G F+ +A+ ++ E++K+ + ++ ++ ++ GLC +G+ + A E F L
Sbjct: 490 GTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAE 549
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
GL D T+ ++ G C+EG ++ A + + + P++ T N+ + GL + G +
Sbjct: 550 SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609
Query: 535 SEKYLQLMKGKGFSADATTTELLINFFSGNK 565
+ + + + D T +I+ F +K
Sbjct: 610 ALNFFNTLIEER-EVDTVTYNTMISAFCKDK 639
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 174/360 (48%), Gaps = 14/360 (3%)
Query: 222 DGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL------FHCSRGK-----VLKKGIMPD 270
+G + AL ++ +M ++P+++T N L GL F S + ++K G+ +
Sbjct: 144 EGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLN 203
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFM-ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
V TF+ +V+ YC EG + A ++ M + V P+ TYN+++ A + ++ D ++
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
M G +P+ VTYN L++G+CK+ + +A ++ M + PD+CT+N L+ G C A
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
G EL+ M+ PD +TY ++DG F+ EA L ++E + + +
Sbjct: 324 GSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTH 383
Query: 450 SIMLDGLC-SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
+I L LC R R+ + G D+ TY +++ + G L A +++ +M
Sbjct: 384 NISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTT-ELLINFFSGNKAD 567
+KG N T N + L + + + L +GF D T L++ FF K +
Sbjct: 444 QKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVE 503
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 154/300 (51%), Gaps = 9/300 (3%)
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA---HCLQDQMQDA 325
P F + Y EG A ++ M R+ ++PN+ T N+L+ + + A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVG 384
+V+D M+ G + T+N L++G+C K++ A+ +L MV++ + PD T+N ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
K G KEL+ M+K+G +P+R+TY ++ G K EA + +++ N+
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
+ Y+I+++GLC+ G +++ E +++ L+ DV TY ++ G GL +A +L+
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 505 MDMEEKGCPPNDCTYNLFVQGLL---RRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
ME G N T+N+ ++ L +R ++R K +L+ GFS D T LI +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVK--ELVDMHGFSPDIVTYHTLIKAY 426
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 207/374 (55%), Gaps = 27/374 (7%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M K+G+EPDIVT +++VNG C +++ A+ +A +M++MG + + +I+ LCK
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
A+ K+++ RG +V Y++++ LCK G + +A EM K I P+V+
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVI---- 119
Query: 250 LTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
TFSA++D Y K G +++ + + M ++ ++PNVFTY
Sbjct: 120 -----------------------TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTY 156
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
+SLI C+ +++ +A+K+ D MI KGC P+ VTY+TL +G+ K ++D + LL +M
Sbjct: 157 SSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQ 216
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
+G+ + + N L+ G+ +AG A + M +G +P+ +Y I+L GLF +
Sbjct: 217 RGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEK 276
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
A+S + ++K D I Y+IM+ G+C +K+A + F L+ K ++ D YTIM+
Sbjct: 277 ALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 336
Query: 490 GLCREGLLDDAEQL 503
L R G+ +A+ L
Sbjct: 337 ELNRAGMRTEADAL 350
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 185/368 (50%), Gaps = 27/368 (7%)
Query: 163 MRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKD 222
++M ++G + T +++NG C + A+ ++E G K DV V T ++D+LCK+
Sbjct: 2 LKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKN 61
Query: 223 GLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYC 282
LV AL + M +GI P+VVT +S+++ C
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVT---------------------------YSSLITGLC 94
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
K G +A AER + M + PNV T+++LI+A+ + ++ VY MI P+
Sbjct: 95 KSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVF 154
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
TY++LI+G C ++D+A+ +L M++KG TP++ T++ L GF K+ +L+ M
Sbjct: 155 TYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 214
Query: 403 QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
+ G + ++ ++ G F+ A+ ++ + L +I Y+I+L GL + G +
Sbjct: 215 PQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEV 274
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLF 522
+ A F +Q +D+ TYTIM+ G+C+ ++ +A L ++ K P+ Y +
Sbjct: 275 EKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIM 334
Query: 523 VQGLLRRG 530
+ L R G
Sbjct: 335 IAELNRAG 342
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 174/372 (46%), Gaps = 27/372 (7%)
Query: 94 RMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEG 153
+M LGIE D T + ++N C + V G M KMG++ D+V T +++ LC
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 154 NVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
V AL + RM + G N T+ ++I GLCK G + A +++ + +V ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT 273
A++D+ K G +++ ++ M I P+V TY+ L GL
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGL------------------- 163
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
C + A +++ M G PNV TY++L N ++ D +K+ D M
Sbjct: 164 --------CMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 215
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
+G +TV+ NTLI G+ + K+D A+ + G M + GL P+I ++N ++ G G
Sbjct: 216 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 275
Query: 394 AAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIML 453
A MQK D ITY I++ G+ K EA L+ +L+ ++ Y+IM+
Sbjct: 276 KALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Query: 454 DGLCSYGRLKDA 465
L G +A
Sbjct: 336 AELNRAGMRTEA 347
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 160/355 (45%), Gaps = 8/355 (2%)
Query: 59 KMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLS 118
KM + P+I + L+N A+ + +M +GI+ D TI+I+ LC+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 119 RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHG 178
VL M G+ P++VT ++++ GLC G + A MD N T
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 179 AIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
A+I+ K G S +K + +V Y++++ LC V+EA+ + M K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 239 GIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
G P+VVTY+ L G F SR + ++G+ + + + ++ Y + G I A
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
+ G+M G+ PN+ +YN ++ +++ A+ ++ M +TY +IHG
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHG 302
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH 405
CK + +A L ++ K + PD + ++ +AGM A L QKH
Sbjct: 303 MCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKH 357
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 129/236 (54%)
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M ++G+EP++ T +SL+N CL + ++DA+ V M G V LI CK +
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+ A+ +L M ++G++P++ T+++L+ G CK+G A+ + M P+ IT++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++D K + S+Y+ + +M++D ++ YS ++ GLC + R+ +A + + +KG
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
+V TY+ + G + +DD +LL DM ++G N + N ++G + G I
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKI 239
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 1/204 (0%)
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
+M+ G+ PDI T ++LV GFC + A + M+K G D + I++D L K
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
A+ + + ++ + ++ YS ++ GLC GRL DA + +K + +V T++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
++ + G L + + M + PN TY+ + GL + + K L LM K
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 546 GFSADATTTELLIN-FFSGNKADN 568
G + + T L N FF ++ D+
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDD 206
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 120/274 (43%), Gaps = 8/274 (2%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ V A++ +M PN+ ++ LI + K A + M S I + TF
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
+ +I+ + + V +M +M ++P++ T ++++ GLC V++A+ + M
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMIS 181
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G N T+ + NG K I + RG + ++ + G ++
Sbjct: 182 KGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDL 241
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLF-------HCSRGKVLKKGIMP-DVHTFSAIVD 279
ALG++ MT G+ P++ +YN + GLF SR + ++K D+ T++ ++
Sbjct: 242 ALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIH 301
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLI 313
CK M+ A L + VEP+ Y +I
Sbjct: 302 GMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 335
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
VD A+ + M + PN+ ++ L N K I L+ M G+ A++ +
Sbjct: 169 VDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNT 228
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I + + DL V G M GL P+I + ++ GL A G VE+AL M +
Sbjct: 229 LIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTR 288
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ T+ +I+G+CK A F K++ + + D YT ++ L + G+ EA
Sbjct: 289 NDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEAD 348
Query: 230 GL 231
L
Sbjct: 349 AL 350
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 142/537 (26%), Positives = 251/537 (46%), Gaps = 18/537 (3%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKM--AAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
+L+S+ VD D F+K+ I P + +++ + T A+ + +
Sbjct: 186 RMLNSLIGSDRVDLIADHFDKLCRGGIEP-SGVSAHGFVLDALFCKGEVTKALDFHRLVM 244
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
G + V+ L + + ++ +L L+ G P++VT T++NG C G ++
Sbjct: 245 ERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+A L M++ G + + +I+G K G F + +G K DV V+++ +
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIM 268
D K G + A ++ M +GI P+VVTY L +GL R G++LK+G+
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P + T+S+++D +CK G + L M ++G P+V Y L++ Q M AM+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV----- 383
M+ + + V +N+LI GWC++ + D+A+ + M G+ PD+ T+ ++
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 384 -GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
FCK P +L MQ++ D +++ LFKCH +A + L + +
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
+ I Y+ M+ G CS RL +A F L+ + T TI++ LC+ +D A +
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+ M EKG PN TY + + DI S K + M+ KG S + ++I+
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 720
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/445 (28%), Positives = 214/445 (48%), Gaps = 21/445 (4%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
F+ I++ VK TA + KRM GI + T+TI+I LC+ R F + G +
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
K G+EP IVT +++++G C GN+ L M +MGY + +G +++GL K G
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A+ + K+ G+ + +V V+ +++D C+ +EAL ++ M GI+PDV T+ +
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 252 RGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
R S + D +CK +L M R + ++ N
Sbjct: 539 R---------------------VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNV 577
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
+I+ +++DA K ++++I P VTYNT+I G+C ++++D+A + +
Sbjct: 578 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 637
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV 431
P+ T L+ CK A + S M + G P+ +TY ++D K +
Sbjct: 638 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 697
Query: 432 SLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGL 491
L+ E+++ + I YSI++DGLC GR+ +A F L DV Y I+++G
Sbjct: 698 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 757
Query: 492 CREGLLDDAEQLLMDMEEKGCPPND 516
C+ G L +A L M G P+D
Sbjct: 758 CKVGRLVEAALLYEHMLRNGVKPDD 782
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/516 (25%), Positives = 223/516 (43%), Gaps = 51/516 (9%)
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIV-NGLCAEGNV 155
LG+ + ++N L R DL + + G+EP V+ V + L +G V
Sbjct: 174 QLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEV 233
Query: 156 EQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
+AL + E G+R + ++ GL V A V G +V + +
Sbjct: 234 TKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTL 292
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF--------HCSRGKVLKKGI 267
++ CK G ++ A L+ M +GI+PD++ Y+ L G F H + L KG+
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
DV FS+ +D Y K G +A A + M G+ PNV TY LI C ++ +A
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+Y ++ +G PS VTY++LI G+CK + +L +M+ G PD+ + LV G
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
K G+ L A M + + + ++DG + + + EA+ ++R + + +
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 448 IY------SIMLDGLCSY-----------------------------------GRLKDAR 466
+ SIM D C + R++DA
Sbjct: 533 TFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
+FF+ L ++ D+ TY M+ G C LD+AE++ ++ PN T + + L
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Query: 527 LRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ D+ + + +M KG +A T L+++FS
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 688
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 124/517 (23%), Positives = 227/517 (43%), Gaps = 57/517 (11%)
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
++AD F ++ C CR D + ++G+ ++ ++N L V+
Sbjct: 144 LDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA 201
Query: 160 GLAMRMDEMGYRCNSYT-HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
++ G + + HG +++ L G + A+ + + V RGF+ + ++
Sbjct: 202 DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG 261
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG---------KVL-KKGIM 268
L D + A L S + G P+VVT+ L G C RG KV+ ++GI
Sbjct: 262 LSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGF--CKRGEMDRAFDLFKVMEQRGIE 318
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
PD+ +S ++D Y K GM+ +L GV+ +V ++S I+ + + A V
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
Y M+ +G P+ VTY LI G C+ ++ +A + G+++ +G+ P I T+++L+ GFCK
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G + L M K G PD + Y +++DGL K A+ ++ ++ ++ +
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT------IMVQGLCRE-----GL- 496
++ ++DG C R +A + F + G+K DV T+T IM C+ GL
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 497 -----------------------------LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLL 527
++DA + ++ E P+ TYN + G
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 528 RRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
+ +E+ +L+K F + T +LI+ N
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKN 655
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 144/336 (42%), Gaps = 33/336 (9%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVI- 111
A+ F KM + N+ F LI+ ++ + A+ + + M GI+ D TFT V+
Sbjct: 480 AMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMR 539
Query: 112 -----NCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+ C+ + +G + LM + + DI +++ L +E A +
Sbjct: 540 VSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI 599
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
E + T+ +I G C + A F+ ++ F + T ++ LCK+ ++
Sbjct: 600 EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMD 659
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGM 286
A+ ++S M KG +P+ VTY CL +D + K
Sbjct: 660 GAIRMFSIMAEKGSKPNAVTYGCL---------------------------MDWFSKSVD 692
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
I + +L M G+ P++ +Y+ +I+ C + ++ +A ++ I LP V Y
Sbjct: 693 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAI 752
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
LI G+CK+ ++ +A L M+ G+ PD AL
Sbjct: 753 LIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 11/228 (4%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A FFN + P+I + +I ++ A + + + ++ T TI
Sbjct: 588 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 647
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I+ LC+ + D + +M + G +P+ VT +++ ++E + L M E G
Sbjct: 648 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 707
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ ++ II+GLCK G A F + DV Y ++ CK G + EA
Sbjct: 708 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK-VLKKGI------MPD 270
L+ M G++PD + L R L + K ++ KG+ MPD
Sbjct: 768 LLYEHMLRNGVKPD----DLLQRALSEYNPPKWLMSKGVWVHDKPMPD 811
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 47 LKTVDAAVDFFNKMAAINPF-PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSF 105
L+ +D A F ++ + PF PN T+LI+++ K AI + M G + ++
Sbjct: 620 LRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 106 TFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
T+ +++ + + F + M + G+ P IV+ + I++GLC G V++A + +
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD 208
+ + + +I G CKVG A ++ + G K D
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 781
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/463 (29%), Positives = 234/463 (50%), Gaps = 11/463 (2%)
Query: 115 CRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNS 174
CR +L M + G PD++ T ++ G N+ +A+ + +++ G + +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 175 YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
+ + A+ING CK+ A ++ + F D Y ++ SLC G ++ AL + ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 235 MTGKGIQPDVVTYNCLTR------GLFHCSR--GKVLKKGIMPDVHTFSAIVDNYCKEGM 286
+ QP V+TY L G+ + ++L +G+ PD+ T++ I+ CKEGM
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
+ RA ++ + G EP+V +YN L+ A Q + ++ K+ M + C P+ VTY+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG 406
LI C+ K+++AM+LL M KGLTPD +++ L+ FC+ G A E + TM G
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
LPD + Y +L L K +A+ ++ +L ++ + + Y+ M L S G A
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
+ + G+ D TY M+ LCREG++D+A +LL+DM P+ TYN+ + G
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 518
Query: 527 LRRGDISRSEKYLQLMKGKGFSADATTTELLIN--FFSGNKAD 567
+ I + L+ M G G + TT +LI F+G +A+
Sbjct: 519 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 220/449 (48%), Gaps = 9/449 (2%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ T LI +++ A+ +++ + G + D F + +IN C+++R D V
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRV 180
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L M PD VT ++ LC+ G ++ AL + ++ + T+ +I
Sbjct: 181 LDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATML 240
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G A+ ++ RG K D+ Y I+ +CK+G+V+ A + + KG +PDV++
Sbjct: 241 EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Query: 247 YNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA 298
YN L R L + + K+ + P+V T+S ++ C++G I A L+ M
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
G+ P+ ++Y+ LI A C + ++ A++ ++MI GCLP V YNT++ CK K D
Sbjct: 361 EKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKAD 420
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
+A+ + G++ G +P+ ++N + +G + A +I M +G PD ITY ++
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMI 480
Query: 419 DGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLK 478
L + EA L ++ + Y+I+L G C R++DA + G +
Sbjct: 481 SCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Query: 479 IDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
+ TYT++++G+ G +A +L D+
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 191/420 (45%), Gaps = 47/420 (11%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ + LIN KM A ++ RM S D+ T+ I+I LC + DL V
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L + +P ++T T ++ EG V++AL L M G + + +T+ II G+CK
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 187 VGNTSAAIGYFKKVEGRGFKFDV-----------------------------------PV 211
G A + +E +G + DV
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV--------- 262
Y+ ++ +LC+DG + EA+ L M KG+ PD +Y+ L C G++
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAF--CREGRLDVAIEFLET 393
Query: 263 -LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
+ G +PD+ ++ ++ CK G +A + G + VG PN +YN++ +A
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
A+ + M+ G P +TYN++I C+ +D+A LL +M + P + T+N
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
++ GFCKA A ++ +M +G P+ TY ++++G+ + EA+ L +L +++
Sbjct: 514 VLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRID 573
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 162/327 (49%), Gaps = 8/327 (2%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
VD A+ ++M + P++ + +I + K A +V+ + G E D ++ I
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
++ L + + G ++ MF +P++VT + ++ LC +G +E+A+ L M E G
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKG 363
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
++Y++ +I C+ G AI + + + G D+ Y ++ +LCK+G ++AL
Sbjct: 364 LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQAL 423
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNY 281
++ ++ G P+ +YN + L+ +++ GI PD T+++++
Sbjct: 424 EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCL 483
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
C+EGM+ A L+ M P+V TYN ++ C +++DA+ V +SM+ GC P+
Sbjct: 484 CREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNE 543
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMV 368
TY LI G +AM L ++V
Sbjct: 544 TTYTVLIEGIGFAGYRAEAMELANDLV 570
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/391 (29%), Positives = 206/391 (52%), Gaps = 8/391 (2%)
Query: 175 YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
Y+ G +I G C+ G + ++ GF +V +YT ++D CK G + +A L+ E
Sbjct: 164 YSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFE 223
Query: 235 MTGKGIQPDVVTYNCLTRGLFHC---SRG-----KVLKKGIMPDVHTFSAIVDNYCKEGM 286
M G+ + TY L GLF +G K+ + G+ P+++T++ +++ CK+G
Sbjct: 224 MGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGR 283
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
A ++ M GV N+ TYN+LI C + ++ +A KV D M G P+ +TYNT
Sbjct: 284 TKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNT 343
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG 406
LI G+C + K+ KA+SL ++ ++GL+P + T+N LV GFC+ G A +++ M++ G
Sbjct: 344 LIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
P ++TY I++D + +A+ L +E++ L + YS+++ G C G++ +A
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
F + K + + Y M+ G C+EG A +LL +MEEK PN +Y ++ L
Sbjct: 464 RLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVL 523
Query: 527 LRRGDISRSEKYLQLMKGKGFSADATTTELL 557
+ +E+ ++ M G + L+
Sbjct: 524 CKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 190/378 (50%), Gaps = 12/378 (3%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ + D ++ PN+ +T LI+ K A L M LG+ A+ T+T+
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+IN L + GF + M + G+ P++ T ++N LC +G + A + M E G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
CN T+ +I GLC+ + A +++ G ++ Y ++D C G + +AL
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG------KVLK----KGIMPDVHTFSAIVD 279
L ++ +G+ P +VTYN L G C +G K++K +GI P T++ ++D
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGF--CRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
+ + + +A +L M +G+ P+V TY+ LI+ C++ QM +A +++ SM+ K C P
Sbjct: 417 TFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEP 476
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
+ V YNT+I G+CK +A+ LL EM K L P++ ++ ++ CK A+ L+
Sbjct: 477 NEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLV 536
Query: 400 STMQKHGQLPDRITYAII 417
M G P ++I
Sbjct: 537 EKMIDSGIDPSTSILSLI 554
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 175/395 (44%), Gaps = 48/395 (12%)
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
+ IIN + + + +I YF ++ GF + ++ + N+ ++E
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156
Query: 237 GKGIQPDVVTYNCLTRGLFHCSRGKVLKK----------GIMPDVHTFSAIVDNYCKEGM 286
K + DV ++ L +G C G++ K G P+V ++ ++D CK+G
Sbjct: 157 SK-VVLDVYSFGILIKGC--CEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
I +A+ L M ++G+ N TY LIN + ++Y+ M G P+ TYN
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG 406
+++ CK + A + EM +G++ +I T+N L+GG C+ A +++ M+ G
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
P+ ITY + ++DG C G+L A
Sbjct: 334 INPNLITY-----------------------------------NTLIDGFCGVGKLGKAL 358
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
L+++GL + TY I+V G CR+G A +++ +MEE+G P+ TY + +
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 527 LRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
R ++ ++ + M+ G D T +LI+ F
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 172/386 (44%), Gaps = 46/386 (11%)
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
+S+ + Y + E KF + Y I++S + +N ++ ++EM G P +N
Sbjct: 77 SSSLLHYLTESETSKTKFRL--YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNY 134
Query: 250 LTRGLFHCSRGKVL-------KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV 302
L + S K ++ DV++F ++ C+ G I ++ L+ + G
Sbjct: 135 LLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGF 194
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
PNV V Y TLI G CK +++KA
Sbjct: 195 SPNV-----------------------------------VIYTTLIDGCCKKGEIEKAKD 219
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
L EM GL + T+ L+ G K G+ E+ MQ+ G P+ TY +++ L
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVF 482
K +A ++ E+ + + +I Y+ ++ GLC +L +A + +++ G+ ++
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 483 TYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
TY ++ G C G L A L D++ +G P+ TYN+ V G R+GD S + K ++ M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 543 KGKGFSADATTTELLINFFSGNKADN 568
+ +G T +LI+ F+ ++DN
Sbjct: 400 EERGIKPSKVTYTILIDTFA--RSDN 423
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 90/187 (48%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ + +L++ + + A +VK M GI+ T+TI+I+ R + +
Sbjct: 371 PSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL 430
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M ++GL PD+ T + +++G C +G + +A L M E N + +I G CK
Sbjct: 431 RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCK 490
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G++ A+ K++E + +V Y +++ LCK+ EA L +M GI P
Sbjct: 491 EGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
Query: 247 YNCLTRG 253
+ ++R
Sbjct: 551 LSLISRA 557
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 135/473 (28%), Positives = 232/473 (49%), Gaps = 17/473 (3%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P+ K ++N +V+ + + + + M S G+ D + ++ C + +
Sbjct: 162 PDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKL 221
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L M +G++P++ T + LC + +E+A + M + G N YT+ A+I+G CK
Sbjct: 222 LDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK 281
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
GN A G +K++ +V V+ ++D CK + A L+ M G+ P++
Sbjct: 282 TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV 341
Query: 247 YNCLTRGLFHCSRGKVLKK----------GIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
YNCL G HC G +L+ + PDV T++ +++ C E +A A RL
Sbjct: 342 YNCLIHG--HCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQK 399
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M + P+ TYNSLI+ +C + M+ A+ + M G P+ +T++TLI G+C ++
Sbjct: 400 MKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRD 459
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+ AM L EM KG+ PD+ T+ AL+ K A L S M + G P+ T+A
Sbjct: 460 IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFAC 519
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++DG +K A+ Y+E + + ++ +++GLC G + A FFS +++ G
Sbjct: 520 LVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCG 579
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
+ D+ +Y M++G +E + D L DM + G P NL V LL R
Sbjct: 580 ITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILP-----NLLVNQLLAR 627
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 144/519 (27%), Positives = 251/519 (48%), Gaps = 14/519 (2%)
Query: 56 FFNKMAAI-NPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCL 114
FN + I +P +I F++LI ++M + A+ + + M DS ++N L
Sbjct: 118 LFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKC---SPDSKACLSILNGL 174
Query: 115 CRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNS 174
R R D + LM GL PD+ + +G + L M +G + N
Sbjct: 175 VRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNV 234
Query: 175 YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
Y + I LC+ A F+ ++ G ++ Y+A++D CK G V +A GL+ E
Sbjct: 235 YIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKE 294
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSRGKV---------LKKGIMPDVHTFSAIVDNYCKEG 285
+ + P+VV + L G F +R V +K G+ P+++ ++ ++ +CK G
Sbjct: 295 ILVAELLPNVVVFGTLVDG-FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSG 353
Query: 286 MIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYN 345
+ A L+ M + + P+VFTY LIN C++DQ+ +A +++ M + PS+ TYN
Sbjct: 354 NMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYN 413
Query: 346 TLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH 405
+LIHG+CK M++A+ L EM G+ P+I T++ L+ G+C AA L M
Sbjct: 414 SLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK 473
Query: 406 GQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDA 465
G +PD +TY ++D FK EA+ LY ++ + + + ++ ++DG GRL A
Sbjct: 474 GIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVA 533
Query: 466 REFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQG 525
+F+ + + +T +++GLC+ G + A + DM G P+ C+Y ++G
Sbjct: 534 IDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKG 593
Query: 526 LLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
L+ I+ + M G + +LL F+ N
Sbjct: 594 HLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQAN 632
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 161/349 (46%), Gaps = 9/349 (2%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V A + ++ PN+ F L++ K + TA SL M G++ + + +
Sbjct: 285 VRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I+ C+ +L M + L PD+ T T ++NGLC E V +A L +M
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+S T+ ++I+G CK N A+ ++ G + ++ ++ ++D C + A+
Sbjct: 405 IFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDVHTFSAIVDNY 281
GL+ EMT KGI PDVVTY L F + K +L+ GI P+ HTF+ +VD +
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGF 524
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
KEG ++ A + N + LI C + A + + M G P
Sbjct: 525 WKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDI 584
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
+Y +++ G + K++ M L +M+ G+ P++ N L+ F +A
Sbjct: 585 CSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLV-NQLLARFYQAN 632
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/528 (25%), Positives = 254/528 (48%), Gaps = 14/528 (2%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
+ + K + A D F + +P+ T+L++ +VK K + I++ +
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 178
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
F + I +LS G + M + P + +++GLC + A L
Sbjct: 179 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQL-- 236
Query: 164 RMDEMGYR---CNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
DEM R + T+ +I+G CK GN + ++++ + + + ++ L
Sbjct: 237 -FDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLF 295
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDVH 272
K G+V +A + EM G PD T++ L G + + + G+ + +
Sbjct: 296 KAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAY 355
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
T S +++ CKEG I +AE ++G G+ PN YN++I+ +C + + A ++M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
+G P + YN LI +C++ +M+ A + +M KG++P + T+N L+GG+ +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIM 452
+++ M+ +G +P+ ++Y +++ L K EA + R++E + + IY+++
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 453 LDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGC 512
+DG CS G+++DA F + KG+++++ TY ++ GL G L +AE LL+++ KG
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 513 PPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
P+ TYN + G G++ R + MK G T LLI+
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 129/487 (26%), Positives = 221/487 (45%), Gaps = 21/487 (4%)
Query: 63 INPFPNIKE---------FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINC 113
IN F NI E + I VK+ + L RM I F + ++I+
Sbjct: 164 INVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDG 223
Query: 114 LCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCN 173
LC+ R + + M L P ++T T+++G C GN E++ + RM +
Sbjct: 224 LCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPS 283
Query: 174 SYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWS 233
T ++ GL K G A K+++ GF D ++ + D + ALG++
Sbjct: 284 LITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYE 343
Query: 234 EMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIMPDVHTFSAIVDNYCK 283
G++ + T + L L C GK+ K KG++P+ ++ ++D YC+
Sbjct: 344 TAVDSGVKMNAYTCSILLNAL--CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCR 401
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
+G + A + M + G++P+ YN LI C +M++A K + M KG PS T
Sbjct: 402 KGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVET 461
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
YN LI G+ + + DK +L EM + G P++ ++ L+ CK L A+ + M+
Sbjct: 462 YNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDME 521
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
G P Y +++DG +A +E+ K ++ ++ Y+ ++DGL G+L
Sbjct: 522 DRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLS 581
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
+A + + KGLK DVFTY ++ G G + L +M+ G P TY+L +
Sbjct: 582 EAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI 641
Query: 524 QGLLRRG 530
+ G
Sbjct: 642 SLCTKEG 648
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 130/522 (24%), Positives = 242/522 (46%), Gaps = 16/522 (3%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
L V ++ FN+M +P++ + VLI+ + K K A L M + + T
Sbjct: 192 LSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLIT 251
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+ +I+ C+ + F V M +EP ++T T++ GL G VE A + M
Sbjct: 252 YNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
++G+ +++T + +G AA+G ++ G K + + ++++LCK+G +
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL----------KKGIMPDVHTFSA 276
+A + KG+ P+ V YN + G +C +G ++ K+G+ PD ++
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDG--YCRKGDLVGARMKIEAMEKQGMKPDHLAYNC 429
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
++ +C+ G + AE+ + M GV P+V TYN LI + + + + M G
Sbjct: 430 LIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNG 489
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
+P+ V+Y TLI+ CK K+ +A + +M ++G++P + +N L+ G C G A
Sbjct: 490 TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAF 549
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
M K G + +TY ++DGL EA L E+ + L + Y+ ++ G
Sbjct: 550 RFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGY 609
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
G ++ + ++ G+K + TY +++ +EG ++ E+L +M K P+
Sbjct: 610 GFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGEMSLK---PDL 665
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
YN + GD+ ++ + M K D TT LI
Sbjct: 666 LVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLI 707
Score = 182 bits (461), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 137/501 (27%), Positives = 236/501 (47%), Gaps = 14/501 (2%)
Query: 59 KMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLS 118
+M A + P++ F L+ + K A +++K M LG D+FTF+I+ +
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 119 RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHG 178
+ + V G++ + T + ++N LC EG +E+A + R G N +
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 179 AIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
+I+G C+ G+ A + +E +G K D Y ++ C+ G + A ++M K
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 239 GIQPDVVTYNCLTRGL---FHCSRG-KVLKK----GIMPDVHTFSAIVDNYCKEGMIARA 290
G+ P V TYN L G + + +LK+ G MP+V ++ +++ CK + A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
+ + M GV P V YN LI+ C + +++DA + M+ KG + VTYNTLI G
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
K+ +A LL E+ KGL PD+ T+N+L+ G+ AG L M++ G P
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 411 RITYAIILDGLFKCHFYPEAVSLYREL-EKMNLDRHITIYSIMLDGLCSYGRLKDAREFF 469
TY +++ K E + L L +M+L + +Y+ +L +G ++ A
Sbjct: 634 LKTYHLLISLCTK-----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 470 SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
+ K + +D TY ++ G + G L + L+ +M + P TYN+ V+G
Sbjct: 689 KQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 530 GDISRSEKYLQLMKGKGFSAD 550
D + + + M+ KGF D
Sbjct: 749 KDYMSAYVWYREMQEKGFLLD 769
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/445 (25%), Positives = 212/445 (47%), Gaps = 24/445 (5%)
Query: 134 GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
G+ P +LT +++ L + + + + E +R + + +G I K+ +
Sbjct: 139 GIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKG 198
Query: 194 IGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
+ F +++ V +Y ++D LCK +N+A L+ EM + + P ++TYN L G
Sbjct: 199 LELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDG 258
Query: 254 LFHCSRGKVLKK----------GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
+C G K I P + TF+ ++ K GM+ AE ++ M +G
Sbjct: 259 --YCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P+ FT++ L + + ++ + A+ VY++ + G + T + L++ CK K++KA +
Sbjct: 317 PDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
LG + KGL P+ +N ++ G+C+ G + A+ I M+K G PD + Y ++
Sbjct: 377 LGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF-- 434
Query: 424 CHFYPEAVSLYRELEKMNL---DRHITIYSIMLDGLCSYGRLKDAREFFSGLQA---KGL 477
C E + +E+ KM L + Y+I++ G YGR + + F L+ G
Sbjct: 435 CEL-GEMENAEKEVNKMKLKGVSPSVETYNILIGG---YGRKYEFDKCFDILKEMEDNGT 490
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
+V +Y ++ LC+ L +A+ + DME++G P YN+ + G +G I + +
Sbjct: 491 MPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 538 YLQLMKGKGFSADATTTELLINFFS 562
+ + M KG + T LI+ S
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLS 575
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 124/521 (23%), Positives = 236/521 (45%), Gaps = 23/521 (4%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V+ A + +M + P+ F++L + + A+ + + G++ +++T +I
Sbjct: 300 VEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSI 359
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
++N LC+ + + +LG GL P+ V T+++G C +G++ A M++ G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ + + +I C++G A K++ +G V Y ++ + ++
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 230 GLWSEMTGKGIQPDVVTY----NCLTRGLFHCSRGKVLK-----KGIMPDVHTFSAIVDN 280
+ EM G P+VV+Y NCL +G +++K +G+ P V ++ ++D
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKG-SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDG 538
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
C +G I A R M + G+E N+ TYN+LI+ + ++ +A + + KG P
Sbjct: 539 CCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
TYN+LI G+ + + ++L EM G+ P + T++ L+ K G+ L + L
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTER-LFG 657
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI----TIYSIMLDGL 456
M PD + Y +G+ C+ + L+K +++ I T Y+ ++ G
Sbjct: 658 EMSLK---PDLLVY----NGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQ 710
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
G+L + R + A+ ++ + TY I+V+G C A +M+EKG +
Sbjct: 711 LKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDV 770
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
C N V GL +E + M G+ D T E L
Sbjct: 771 CIGNELVSGLKEEWRSKEAEIVISEMNGRML-GDVTVDEDL 810
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 201/446 (45%), Gaps = 12/446 (2%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LL+++ ++ A + + A PN + +I+ + A ++ M G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
++ D + +I C L + + M G+ P + T ++ G + ++
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ M++ G N ++G +IN LCK A + +E RG V +Y ++D
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDV 271
C G + +A EM KGI+ ++VTYN L GL + ++ +KG+ PDV
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
T+++++ Y G + R L M R G++P + TY+ LI+ C ++ ++ +++
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL-CTKEGIELTERLFGE 658
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
M K P + YN ++H + M+KA +L +M+ K + D T+N+L+ G K G
Sbjct: 659 MSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGK 715
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
+ LI M P+ TY II+ G + Y A YRE+++ + I +
Sbjct: 716 LCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNE 775
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGL 477
++ GL R K+A S + + L
Sbjct: 776 LVSGLKEEWRSKEAEIVISEMNGRML 801
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 144/297 (48%)
Query: 265 KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQD 324
+GI P + + ++D+ K + + P+ F Y I A +
Sbjct: 138 EGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK 197
Query: 325 AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
+++++ M + PS YN LI G CK K+M+ A L EM+ + L P + T+N L+
Sbjct: 198 GLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLID 257
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
G+CKAG P + ++ M+ P IT+ +L GLFK +A ++ +E++ +
Sbjct: 258 GYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVP 317
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
+SI+ DG S + + A + G+K++ +T +I++ LC+EG ++ AE++L
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
KG PN+ YN + G R+GD+ + ++ M+ +G D LI F
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 96/211 (45%)
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
K + +A L + N+G+ P + L+ K + + + P + Y
Sbjct: 123 KMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMY 182
Query: 415 AIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
+ K + + L+ ++ + + IY++++DGLC R+ DA + F + A
Sbjct: 183 GKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLA 242
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
+ L + TY ++ G C+ G + + ++ M+ P+ T+N ++GL + G +
Sbjct: 243 RRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVED 302
Query: 535 SEKYLQLMKGKGFSADATTTELLINFFSGNK 565
+E L+ MK GF DA T +L + +S N+
Sbjct: 303 AENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 224/455 (49%), Gaps = 12/455 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
F+ I++ VK TA + KRM GI + T+TI+I LC+ R F + G +
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQIL 418
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
K G+EP IVT +++++G C GN+ L M +MGY + +G +++GL K G
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A+ + K+ G+ + +V V+ +++D C+ +EAL ++ M GI+PDV T+ +
Sbjct: 479 HAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 252 R----------GLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
R LF R + K G+ PD + ++D +CK +L M R
Sbjct: 539 RVSIMEGRLEEALFLFFR--MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNK 596
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
+ ++ N +I+ +++DA K ++++I P VTYNT+I G+C ++++D+A
Sbjct: 597 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 656
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL 421
+ + P+ T L+ CK A + S M + G P+ +TY ++D
Sbjct: 657 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 716
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
K + L+ E+++ + I YSI++DGLC GR+ +A F L DV
Sbjct: 717 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 776
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
Y I+++G C+ G L +A L M G P+D
Sbjct: 777 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 811
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 131/483 (27%), Positives = 228/483 (47%), Gaps = 12/483 (2%)
Query: 89 ISLVKRMHSL----GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTT 144
I + R+ SL G + TF +IN C+ D F + +M + G+EPD++ +T
Sbjct: 267 IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYST 326
Query: 145 IVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG 204
+++G G + L + G + + + I+ K G+ + A +K++ +G
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--- 261
+V YT ++ LC+DG + EA G++ ++ +G++P +VTY+ L G C +
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 262 -----VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH 316
++K G PDV + +VD K+G++ A R M + NV +NSLI+
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 317 CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
C ++ +A+KV+ M G P T+ T++ ++++A+ L M GL PD
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
+ L+ FCK P +L MQ++ D +++ LFKCH +A +
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
L + ++ I Y+ M+ G CS RL +A F L+ + T TI++ LC+
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTEL 556
+D A ++ M EKG PN TY + + DI S K + M+ KG S + +
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 557 LIN 559
+I+
Sbjct: 747 IID 749
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/535 (25%), Positives = 254/535 (47%), Gaps = 14/535 (2%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKM--AAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
+L+S+ VD D F+K+ I P + +++ + T A+ + +
Sbjct: 186 RMLNSLIGSDRVDLIADHFDKLCRGGIEP-SGVSAHGFVLDALFCKGEVTKALDFHRLVM 244
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
G + V+ L + + ++ +L L+ G P++VT T++NG C G ++
Sbjct: 245 ERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+A L M++ G + + +I+G K G F + +G K DV V+++ +
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIM 268
D K G + A ++ M +GI P+VVTY L +GL R G++LK+G+
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P + T+S+++D +CK G + L M ++G P+V Y L++ Q M AM+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
M+ + + V +N+LI GWC++ + D+A+ + M G+ PD+ T+ ++
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE-AVSLYRELEKMNLDRHIT 447
G A L M K G PD + Y ++D K H P + L+ +++ + I
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK-HMKPTIGLQLFDLMQRNKISADIA 602
Query: 448 IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
+ ++++ L R++DA +FF+ L ++ D+ TY M+ G C LD+AE++ +
Sbjct: 603 VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELL 662
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ PN T + + L + D+ + + +M KG +A T L+++FS
Sbjct: 663 KVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFS 717
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 220/473 (46%), Gaps = 16/473 (3%)
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
++AD F ++ C CR D + ++G+ ++ ++N L V+
Sbjct: 144 LDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA 201
Query: 160 GLAMRMDEMGYRCNSYT-HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
++ G + + HG +++ L G + A+ + + V RGF+ + ++
Sbjct: 202 DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG 261
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG---------KVL-KKGIM 268
L D + A L S + G P+VVT+ L G C RG KV+ ++GI
Sbjct: 262 LSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGF--CKRGEMDRAFDLFKVMEQRGIE 318
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
PD+ +S ++D Y K GM+ +L GV+ +V ++S I+ + + A V
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
Y M+ +G P+ VTY LI G C+ ++ +A + G+++ +G+ P I T+++L+ GFCK
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCK 438
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G + L M K G PD + Y +++DGL K A+ ++ ++ ++ +
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVV 498
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
++ ++DG C R +A + F + G+K DV T+T +++ EG L++A L M
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMF 558
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ G P+ Y + + + + LM+ SAD ++I+
Sbjct: 559 KMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 203/446 (45%), Gaps = 10/446 (2%)
Query: 124 FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIING 183
F VLG + L+ D+ ++ C G V++AL + + ++G + ++N
Sbjct: 133 FNVLGSIRDRSLDADVCKF--LMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNS 190
Query: 184 LCKVGNTSAAIGYFKKVEGRGFKFD-VPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQP 242
L +F K+ G + V + ++D+L G V +AL + +G +
Sbjct: 191 LIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRV 250
Query: 243 DVVTYNCLTRGLFH-----CSR--GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
+V+ N + +GL SR VL G P+V TF +++ +CK G + RA L
Sbjct: 251 GIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
M + G+EP++ Y++LI+ + + K++ ++KG V +++ I + K
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 356 KMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYA 415
+ A + M+ +G++P++ T+ L+ G C+ G A + + K G P +TY+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 416 IILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK 475
++DG KC +LY ++ KM + IY +++DGL G + A F + +
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 476 GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRS 535
++++V + ++ G CR D+A ++ M G P+ T+ ++ + G + +
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 536 EKYLQLMKGKGFSADATTTELLINFF 561
M G DA LI+ F
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAF 576
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 154/359 (42%), Gaps = 43/359 (11%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ + VL++ + K A+ +M I + F +I+ CRL+R D V
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
LM G++PD+ T TT++ EG +E+AL L RM +MG ++ + +I+ CK
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+ + F ++ D+ V ++ L K + +A ++ + ++PD+VT
Sbjct: 579 HMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVT 638
Query: 247 YN------CLTRGLFHCSR-------------------------------------GKVL 263
YN C R L R +
Sbjct: 639 YNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA 698
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
+KG P+ T+ ++D + K I + +L M G+ P++ +Y+ +I+ C + ++
Sbjct: 699 EKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD 758
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
+A ++ I LP V Y LI G+CK+ ++ +A L M+ G+ PD AL
Sbjct: 759 EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 100/228 (43%), Gaps = 11/228 (4%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A FFN + P+I + +I ++ A + + + ++ T TI
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I+ LC+ + D + +M + G +P+ VT +++ ++E + L M E G
Sbjct: 677 LIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKG 736
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ ++ II+GLCK G A F + DV Y ++ CK G + EA
Sbjct: 737 ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 796
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK-VLKKGI------MPD 270
L+ M G++PD + L R L + K ++ KG+ MPD
Sbjct: 797 LLYEHMLRNGVKPD----DLLQRALSEYNPPKWLMSKGVWVHDKPMPD 840
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 47 LKTVDAAVDFFNKMAAINPF-PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSF 105
L+ +D A F ++ + PF PN T+LI+++ K AI + M G + ++
Sbjct: 649 LRRLDEAERIF-ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 707
Query: 106 TFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
T+ +++ + + F + M + G+ P IV+ + I++GLC G V++A + +
Sbjct: 708 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 767
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD 208
+ + + +I G CKVG A ++ + G K D
Sbjct: 768 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 136/536 (25%), Positives = 249/536 (46%), Gaps = 21/536 (3%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++S R + + AV+ F ++ P++K + +++ ++ + + M G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
E + FT+ +++ LC+ ++ D +L M G PD V+ TT+++ +C G V++
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
LA R + + + A+INGLCK + A +++ +G +V Y+ +++ L
Sbjct: 237 ELAERFEPV-----VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVL 291
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK-----------GIM 268
C G + A ++M +G P++ T + L +G F RG G+
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF--LRGTTFDALDLWNQMIRGFGLQ 349
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P+V ++ +V +C G I +A + M +G PN+ TY SLIN + + A+ +
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
++ M+ GC P+ V Y ++ C+ K +A SL+ M + P + T+NA + G C
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 469
Query: 389 AGMPLAAKELISTM-QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
AG A+++ M Q+H P+ +TY +LDGL K + EA L RE+ ++ +
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS 529
Query: 448 IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL--LM 505
Y+ +L G C+ G A + + G D T +++ C++G + A Q+ L+
Sbjct: 530 TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLV 589
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ P+ +Y + GL R L+ M G T +LIN F
Sbjct: 590 SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 114/444 (25%), Positives = 209/444 (47%), Gaps = 20/444 (4%)
Query: 140 VTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKK 199
+T ++ L +G V+ L +M G+ C+ ++I+ +VG A+ F +
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 200 VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR 259
++ G V +Y ++D+L + + ++ +M G +P+V TYN L + L C
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKAL--CKN 194
Query: 260 GKV----------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
KV KG PD +++ ++ + C+ G++ L EP V Y
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVY 249
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
N+LIN C + + A ++ M+ KG P+ ++Y+TLI+ C +++ A S L +M+
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK 309
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK-HGQLPDRITYAIILDGLFKCHFYP 428
+G P+I T ++LV G G A +L + M + G P+ + Y ++ G
Sbjct: 310 RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
+AVS++ +E++ +I Y +++G G L A ++ + G +V YT MV
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
+ LCR +AE L+ M ++ C P+ T+N F++GL G + +EK + M+ +
Sbjct: 430 EALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRC 489
Query: 549 AD--ATTTELLINFFSGNKADNTF 570
T ELL N+ + +
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAY 513
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 165/372 (44%), Gaps = 34/372 (9%)
Query: 193 AIGYFKKVEGRG-FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A+ +FK + FK + ++ L DG V+ L +M +G
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG------------ 106
Query: 252 RGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
FHCS F +++ Y + G+ RA + + G +P+V YN
Sbjct: 107 ---FHCSED------------LFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNH 151
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
+++ ++++Q VY M G P+ TYN L+ CK K+D A LL EM NKG
Sbjct: 152 VLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG 211
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV 431
PD ++ ++ C+ G+ +EL + P Y +++GL K H Y A
Sbjct: 212 CCPDAVSYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAF 266
Query: 432 SLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGL 491
L RE+ + + ++ YS +++ LC+ G+++ A F + + +G +++T + +V+G
Sbjct: 267 ELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326
Query: 492 CREGLLDDAEQLLMDMEEK-GCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD 550
G DA L M G PN YN VQG G+I ++ M+ G S +
Sbjct: 327 FLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPN 386
Query: 551 ATTTELLINFFS 562
T LIN F+
Sbjct: 387 IRTYGSLINGFA 398
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 126/282 (44%), Gaps = 17/282 (6%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
AV F+ M I PNI+ + LIN K A+ + +M + G + +T ++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
LCR S+ ++ +M K P + T + GLC G ++ A + +M++ +RC
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ-HRC 489
Query: 173 --NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
N T+ +++GL K A G +++ RG ++ Y ++ C GL AL
Sbjct: 490 PPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQ 549
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM------------PDVHTFSAIV 278
L +M G PD +T N + L +C +GK + M PDV +++ ++
Sbjct: 550 LVGKMMVDGKSPDEITMNMII--LAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVI 607
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
C+ L+ M G+ P++ T++ LIN L D
Sbjct: 608 WGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDD 649
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/435 (29%), Positives = 228/435 (52%), Gaps = 15/435 (3%)
Query: 118 SRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTH 177
SR +LGF G + ++ ++ L E + M + N +T
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTF 226
Query: 178 GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCK---DGLVNEALGLWSE 234
+IN LCK G + A + ++ G +V Y ++D CK +G + +A + E
Sbjct: 227 NVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKE 286
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGM 286
M + P++ T+N L G + ++L + + P+V +++++++ C G
Sbjct: 287 MVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGK 346
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
I+ A + M GV+PN+ TYN+LIN C D +++A+ ++ S+ +G +P+T YN
Sbjct: 347 ISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNM 406
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG 406
LI +CK+ K+D +L EM +G+ PD+ T+N L+ G C+ G AAK+L + G
Sbjct: 407 LIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG 466
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD-RHITIYSIMLDGLCSYGRLKDA 465
LPD +T+ I+++G + +A L +E+ KM L RH+T Y+I++ G C G LK A
Sbjct: 467 -LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLT-YNIVMKGYCKEGNLKAA 524
Query: 466 REFFSGLQ-AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
+ ++ + L+++V +Y +++QG ++G L+DA LL +M EKG PN TY + +
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Query: 525 GLLRRGDISRSEKYL 539
++ +G + E +L
Sbjct: 585 EMVDQGFVPDIEGHL 599
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 207/395 (52%), Gaps = 19/395 (4%)
Query: 184 LCKVGNTSAAIGY--FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
L N+ +G+ FK+ G+K +M +L K+ + ++ EM + IQ
Sbjct: 161 LAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQ 220
Query: 242 PDVVTYNCLTRGLFHCSRGKVLKK----------GIMPDVHTFSAIVDNYCK---EGMIA 288
P+V T+N + L C GK+ K G P+V +++ ++D YCK G +
Sbjct: 221 PNVFTFNVVINAL--CKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY 278
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
+A+ ++ M V PN+ T+N LI+ D + +MKV+ M+ + P+ ++YN+LI
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
+G C K+ +A+S+ +MV+ G+ P++ T+NAL+ GFCK M A ++ +++ G +
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
P Y +++D K + +L E+E+ + + Y+ ++ GLC G ++ A++
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLR 528
F L +KGL D+ T+ I+++G CR+G A LL +M + G P TYN+ ++G +
Sbjct: 459 FDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 529 RGDI-SRSEKYLQLMKGKGFSADATTTELLINFFS 562
G++ + + Q+ K + + + +L+ +S
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 198/393 (50%), Gaps = 13/393 (3%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M + ++P++ T ++N LC G + +A + M G N ++ +I+G CK+G
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 190 TSA---AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
A K++ ++ + ++D KD + ++ ++ EM + ++P+V++
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 247 YNCLTRGLFH--------CSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA 298
YN L GL + R K++ G+ P++ T++A+++ +CK M+ A + G +
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
G P YN LI+A+C ++ D + + M +G +P TYN LI G C+ ++
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
A L ++ +KGL PD+ T++ L+ G+C+ G A L+ M K G P +TY I++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Query: 419 DGLFKCHFYPEAVSLYRELEK-MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
G K A ++ ++EK L ++ Y+++L G G+L+DA + + KGL
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
+ TY I+ + + +G + D E L ++ K
Sbjct: 573 VPNRITYEIVKEEMVDQGFVPDIEGHLFNVSTK 605
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 173/344 (50%), Gaps = 17/344 (4%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKM----KHYTTAISLVKRMHSLGIEADSF 105
++ A D M PN+ + LI+ K+ K Y A +++K M + +
Sbjct: 239 MNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK-ADAVLKEMVENDVSPNLT 297
Query: 106 TFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
TF I+I+ + V M ++P++++ +++NGLC G + +A+ + +M
Sbjct: 298 TFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKM 357
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
G + N T+ A+ING CK A+ F V+G+G +Y ++D+ CK G +
Sbjct: 358 VSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKI 417
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV---------LKKGIMPDVHTFSA 276
++ L EM +GI PDV TYNCL GL C G + L +PD+ TF
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGL--CRNGNIEAAKKLFDQLTSKGLPDLVTFHI 475
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
+++ YC++G +A L+ M+++G++P TYN ++ +C + ++ A + M +
Sbjct: 476 LMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKER 535
Query: 337 CLPSTV-TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
L V +YN L+ G+ + K++ A LL EM+ KGL P+ T+
Sbjct: 536 RLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 81/199 (40%), Gaps = 32/199 (16%)
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
EM+ + + P++ T+N ++ CK G A++++ M+ +G P+ ++Y ++DG K
Sbjct: 213 EMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK-- 270
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
L G++ A + + ++ T+
Sbjct: 271 ------------------------------LGGNGKMYKADAVLKEMVENDVSPNLTTFN 300
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
I++ G ++ L + ++ +M ++ PN +YN + GL G IS + M
Sbjct: 301 ILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSA 360
Query: 546 GFSADATTTELLINFFSGN 564
G + T LIN F N
Sbjct: 361 GVQPNLITYNALINGFCKN 379
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 141/557 (25%), Positives = 264/557 (47%), Gaps = 50/557 (8%)
Query: 42 SSMRDLKTVDAAVDFFNKMAAINPF--PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
S ++++ A D F+ + + P F L ++++ + AI +M
Sbjct: 163 SVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFR 222
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ + + +++ +L +TD M G P + T +++ +C EG+VE A
Sbjct: 223 VFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAAR 282
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
GL M G ++ T+ ++I+G KVG + +F++++ + DV Y A+++
Sbjct: 283 GLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMP 269
CK G + L + EM G G++P+VV+Y+ L C G + + G++P
Sbjct: 343 CKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF--CKEGMMQQAIKFYVDMRRVGLVP 400
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+ +T+++++D CK G ++ A RL M +VGVE NV TY +LI+ C ++M++A +++
Sbjct: 401 NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELF 460
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
M G +P+ +YN LIHG+ K K MD+A+ LL E+ +G+ PD+ + + G C
Sbjct: 461 GKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSL 520
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT-- 447
AAK +++ M++ G + + Y ++D FK E + L E+++++++ +
Sbjct: 521 EKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTF 580
Query: 448 ----------------------------------IYSIMLDGLCSYGRLKDAREFFSGLQ 473
I++ M+DGLC +++ A F +
Sbjct: 581 CVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMV 640
Query: 474 AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDIS 533
KGL D YT ++ G ++G + +A L M E G + Y V GL +
Sbjct: 641 QKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQ 700
Query: 534 RSEKYLQLMKGKGFSAD 550
++ +L+ M G+G D
Sbjct: 701 KARSFLEEMIGEGIHPD 717
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 121/463 (26%), Positives = 219/463 (47%), Gaps = 9/463 (1%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V+AA F +M P+ + +I+ K+ + + M + E D T+
Sbjct: 278 VEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNA 337
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+INC C+ + +G M GL+P++V+ +T+V+ C EG ++QA+ + M +G
Sbjct: 338 LINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVG 397
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
N YT+ ++I+ CK+GN S A ++ G +++V YTA++D LC + EA
Sbjct: 398 LVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAE 457
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNY 281
L+ +M G+ P++ +YN L G ++ +GI PD+ + +
Sbjct: 458 ELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGL 517
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
C I A+ +M M G++ N Y +L++A+ + + + D M +
Sbjct: 518 CSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTV 577
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKELIS 400
VT+ LI G CK K + KA+ + N GL + + A++ G CK AA L
Sbjct: 578 VTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M + G +PDR Y ++DG FK EA++L ++ ++ + + Y+ ++ GL
Sbjct: 638 QMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCN 697
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+L+ AR F + +G+ D +++ G +D+A +L
Sbjct: 698 QLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 179/367 (48%), Gaps = 10/367 (2%)
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK----- 265
V+ A+ L G++ EA+ +S+M + P + N L + +K+
Sbjct: 194 VFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDM 253
Query: 266 ---GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
G P V T++ ++D CKEG + A L M G+ P+ TYNS+I+ ++
Sbjct: 254 IGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRL 313
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
D + ++ M C P +TYN LI+ +CK K+ + EM GL P++ +++ L
Sbjct: 314 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
V FCK GM A + M++ G +P+ TY ++D K +A L E+ ++ +
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
+ ++ Y+ ++DGLC R+K+A E F + G+ ++ +Y ++ G + +D A +
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN--F 560
LL +++ +G P+ Y F+ GL I ++ + MK G A++ L++ F
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 561 FSGNKAD 567
SGN +
Sbjct: 554 KSGNPTE 560
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 218/514 (42%), Gaps = 48/514 (9%)
Query: 53 AVDFFNKMAAINPFPN-IKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVI 111
A FF N F + ++ + ++ +++ + Y A S++K M + D F
Sbjct: 125 AFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWST 184
Query: 112 NCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYR 171
+C GF V +F + L G +E+A+ +M
Sbjct: 185 RNVCVP-----GFGVFDALFSV---------------LIDLGMLEEAIQCFSKMKRFRVF 224
Query: 172 CNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGL 231
+ + +++ K+G T +FK + G G + V Y ++D +CK+G V A GL
Sbjct: 225 PKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 232 WSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
+ EM +G+ PD V T+++++D + K G +
Sbjct: 285 FEEMKFRGLVPDTV---------------------------TYNSMIDGFGKVGRLDDTV 317
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
M + EP+V TYN+LIN C ++ ++ Y M G P+ V+Y+TL+ +
Sbjct: 318 CFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK M +A+ +M GL P+ T+ +L+ CK G A L + M + G +
Sbjct: 378 CKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNV 437
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
+TY ++DGL EA L+ +++ + ++ Y+ ++ G + A E +
Sbjct: 438 VTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 497
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
L+ +G+K D+ Y + GLC ++ A+ ++ +M+E G N Y + + G+
Sbjct: 498 LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFSGNK 565
+ L MK T +LI+ NK
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNK 591
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 92/177 (51%), Gaps = 1/177 (0%)
Query: 58 NKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRM-HSLGIEADSFTFTIVINCLCR 116
++M ++ + F VLI+ + K K + A+ R+ + G++A++ FT +I+ LC+
Sbjct: 566 DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCK 625
Query: 117 LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
++ + + M + GL PD T++++G +GNV +AL L +M E+G + +
Sbjct: 626 DNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLA 685
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWS 233
+ +++ GL A + +++ G G D + +++ + G ++EA+ L S
Sbjct: 686 YTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQS 742
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 147/551 (26%), Positives = 251/551 (45%), Gaps = 35/551 (6%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ AV F+ + P + VL++ +++ + K M + D T+ +
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226
Query: 110 VINCLCRLSRTDLGFCVL----------------GLMFK-----MGLEPDIVTLTTIVNG 148
+I CR LG VL L K GL P T +++G
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDG 286
Query: 149 LCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD 208
LC +E A L + MD +G +++T+ +I+GL K N AA G ++ G
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 209 VPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL----- 263
+Y + + K+G++ +A L+ M G+ P Y L G +C V
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG--YCREKNVRQGYEL 404
Query: 264 -----KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCL 318
K+ I+ +T+ +V C G + A ++ M G PNV Y +LI
Sbjct: 405 LVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQ 464
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
+ DAM+V M +G P YN+LI G K K+MD+A S L EMV GL P+ T
Sbjct: 465 NSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFT 524
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
+ A + G+ +A +A + + M++ G LP+++ +++ K EA S YR +
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
+ Y+++++GL ++ DA E F ++ KG+ DVF+Y +++ G + G +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 499 DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
A + +M E+G PN YN+ + G R G+I ++++ L M KG +A T +I
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 559 NFF--SGNKAD 567
+ + SG+ A+
Sbjct: 705 DGYCKSGDLAE 715
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/528 (25%), Positives = 247/528 (46%), Gaps = 20/528 (3%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A + +M A PN+ +T LI ++ + A+ ++K M GI D F +
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I L + R D L M + GL+P+ T ++G A M E G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
N +IN CK G A ++ + +G D YT +M+ L K+ V++A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNY 281
++ EM GKGI PDV +Y L G +++++G+ P+V ++ ++ +
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
C+ G I +A+ L+ M+ G+ PN TY ++I+ +C + +A +++D M KG +P +
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS- 400
Y TL+ G C++ +++A+++ G KG +NAL+ K G E+++
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 401 ----TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
+ + G+ P+ +TY I++D L K A L+ +++ NL + Y+ +L+G
Sbjct: 792 LMDGSFDRFGK-PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGY 850
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK-----G 511
GR + F A G++ D Y++++ +EG+ A L+ M K G
Sbjct: 851 DKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDG 910
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
C + T + G + G++ +EK ++ M + D+ T LIN
Sbjct: 911 CKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958
Score = 195 bits (495), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 137/520 (26%), Positives = 237/520 (45%), Gaps = 9/520 (1%)
Query: 49 TVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFT 108
VD A+ M P + VLI+ + K+K A SL+ M SLG+ D+ T++
Sbjct: 257 NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYS 316
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
++I+ L + D ++ M G+ + + EG +E+A L M
Sbjct: 317 LLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS 376
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G + + ++I G C+ N +++ R Y ++ +C G ++ A
Sbjct: 377 GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA 436
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR----GKVLK----KGIMPDVHTFSAIVDN 280
+ EM G +P+VV Y L + SR +VLK +GI PD+ +++++
Sbjct: 437 YNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIG 496
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
K + A + M G++PN FTY + I+ + + A K M G LP+
Sbjct: 497 LSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN 556
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
V LI+ +CK K+ +A S MV++G+ D T+ L+ G K A+E+
Sbjct: 557 KVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M+ G PD +Y ++++G K +A S++ E+ + L ++ IY+++L G C G
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
++ A+E + KGL + TY ++ G C+ G L +A +L +M+ KG P+ Y
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYT 736
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
V G R D+ R+ K KG ++ LIN+
Sbjct: 737 TLVDGCCRLNDVERAITIFGTNK-KGCASSTAPFNALINW 775
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/488 (25%), Positives = 211/488 (43%), Gaps = 37/488 (7%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ + K +D A F +M PN + I+ ++ + +A VK M G
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG 552
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ + T +IN C+ + M G+ D T T ++NGL V+ A
Sbjct: 553 VLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAE 612
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ M G + +++G +ING K+GN A F ++ G +V +Y ++
Sbjct: 613 EIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGF 672
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVD 279
C+ G + +A L EM+ KG+ P+ VTY C+ I+D
Sbjct: 673 CRSGEIEKAKELLDEMSVKGLHPNAVTY---------CT------------------IID 705
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
YCK G +A A RL M G+ P+ F Y +L++ C + ++ A+ ++ + KGC
Sbjct: 706 GYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCAS 764
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL----TPDICTWNALVGGFCKAGMPLAA 395
ST +N LI+ K K + +L +++ P+ T+N ++ CK G AA
Sbjct: 765 STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAA 824
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
KEL MQ +P ITY +L+G K E ++ E ++ +YS++++
Sbjct: 825 KELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA 884
Query: 456 LCSYGRLKDAREFFSGLQAK-----GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
G A + AK G K+ + T ++ G + G ++ AE+++ +M
Sbjct: 885 FLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRL 944
Query: 511 GCPPNDCT 518
P+ T
Sbjct: 945 QYIPDSAT 952
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 153/373 (41%), Gaps = 55/373 (14%)
Query: 68 NIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVL 127
+ K +TVL+N + K A + + M GI D F++ ++IN +L +
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650
Query: 128 GLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKV 187
M + GL P+++ ++ G C G +E+A L M G N+ T+ II+G CK
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
G+ + A F +++ +G D VYT ++D C+ V A+ ++ KG +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPF 769
Query: 248 NCLTRGLFHCSRGKVLKKGIM-------------PDVHTFSAIVDNYCKEGMIARAERLM 294
N L +F + + LK ++ P+ T++ ++D CKEG + A+ L
Sbjct: 770 NALINWVFKFGKTE-LKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELF 828
Query: 295 GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH----- 349
M + P V TY SL+N + + + V+D I G P + Y+ +I+
Sbjct: 829 HQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Query: 350 -----------------------------------GWCKIKKMDKAMSLLGEMVNKGLTP 374
G+ K+ +M+ A ++ MV P
Sbjct: 889 GMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIP 948
Query: 375 DICTWNALVGGFC 387
D T L+ C
Sbjct: 949 DSATVIELINESC 961
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 135/360 (37%), Gaps = 86/360 (23%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
VD A + F +M P++ + VLIN K+ + A S+ M G+ + + +
Sbjct: 608 VDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
++ CR + +L M GL P+ VT TI++G C G++ +A L M G
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYF-------------------------------- 197
+S+ + +++G C++ + AI F
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTE 787
Query: 198 ---KKVEGRGFKFDVP---VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
+ ++G +F P Y ++D LCK+G + A L+ +M + P V+TY L
Sbjct: 788 VLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLL 847
Query: 252 RGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARA------------- 290
G R + + GI PD +S I++ + KEGM +A
Sbjct: 848 NGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAV 907
Query: 291 ---------------------------ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
E++M M R+ P+ T LIN C+ +
Sbjct: 908 DDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESCISSNQR 967
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/247 (21%), Positives = 101/247 (40%), Gaps = 38/247 (15%)
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
+++ L C +KA+S++ M+ + P W+++V ++E +
Sbjct: 99 SFSFLALDLCNFGSFEKALSVVERMIERNW-PVAEVWSSIVR---------CSQEFV--- 145
Query: 403 QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
G+ D + + I+ DG + EAV ++ + L ++ ++LD L + RL
Sbjct: 146 ---GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE------------- 509
+ + G+ + + DV TY +++ CR G + + +L E+
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262
Query: 510 --------KGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN-F 560
KG P TY++ + GL + + ++ L M G S D T LLI+
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322
Query: 561 FSGNKAD 567
G AD
Sbjct: 323 LKGRNAD 329
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/500 (26%), Positives = 237/500 (47%), Gaps = 30/500 (6%)
Query: 57 FNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLC- 115
N M +P+ K F L++ ++ A L+K+M G + I+I +C
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 116 -----RLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
DL M G+ + + +++ LC+ G E+A + M G+
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
++ T+ ++N LC A F++++ G DV YT ++DS CK GL+ +A
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYC 282
++EM G P+VVTY L + +L +G +P++ T+SA++D +C
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 283 KEGMIARA----ERLMGFMARVGVE------------PNVFTYNSLINAHCLQDQMQDAM 326
K G + +A ER+ G V+ PNV TY +L++ C ++++A
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
K+ D+M +GC P+ + Y+ LI G CK+ K+D+A + EM G + T+++L+ +
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRY 719
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
K A +++S M ++ P+ + Y ++DGL K EA L + +E+ ++
Sbjct: 720 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNV 779
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
Y+ M+DG G+++ E + +KG+ + TY +++ C+ G LD A LL +
Sbjct: 780 VTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEE 839
Query: 507 MEEKGCPPNDCTYNLFVQGL 526
M++ P + Y ++G
Sbjct: 840 MKQTHWPTHTAGYRKVIEGF 859
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 160/602 (26%), Positives = 253/602 (42%), Gaps = 107/602 (17%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG-IEADSFTFTIVINCLCRLSRTDLGFC 125
P+ + LI +K +A SL+ R SL + D FT LC++ +
Sbjct: 233 PSRSTYNCLIQAFLKADRLDSA-SLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREA-- 289
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM-------------------- 165
L L+ PD V T +++GLC E+A+ RM
Sbjct: 290 -LTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348
Query: 166 --DEMGYRCNS----------YTHGAIINGL----CKVGNTSAAIGYFKKVEGRGFKFDV 209
++G RC Y I N L C G+ S A KK+ G
Sbjct: 349 NKKQLG-RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGY 407
Query: 210 PVYTAIMDSLCKD-----------------------------------------GLVNEA 228
VY ++ S+C D G +A
Sbjct: 408 VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA 467
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL--------KKGIMPDVHTFSAIVDN 280
+ EM G+G PD TY+ + L + S+ ++ + G++ DV+T++ +VD+
Sbjct: 468 FSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDS 527
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
+CK G+I +A + M VG PNV TY +LI+A+ ++ A +++++M+ +GCLP+
Sbjct: 528 FCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPN 587
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD----------------ICTWNALVG 384
VTY+ LI G CK +++KA + M PD + T+ AL+
Sbjct: 588 IVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLD 647
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
GFCK+ A++L+ M G P++I Y ++DGL K EA + E+ +
Sbjct: 648 GFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPA 707
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
+ YS ++D R A + S + +V YT M+ GLC+ G D+A +L+
Sbjct: 708 TLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLM 767
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
MEEKGC PN TY + G G I + L+ M KG + + T +LI+ N
Sbjct: 768 QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKN 827
Query: 565 KA 566
A
Sbjct: 828 GA 829
Score = 194 bits (493), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 135/535 (25%), Positives = 242/535 (45%), Gaps = 30/535 (5%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
+L+S + + + A+DF N+M A + PN+ ++ L+ + K ++ M
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN---- 154
G F +++ C + +L M K G P V ++ +C + +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNC 426
Query: 155 --VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVY 212
++ A M G N + LC G A +++ G+GF D Y
Sbjct: 427 DLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTY 486
Query: 213 TAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT-----RGLFHCSR---GKVLK 264
+ +++ LC + A L+ EM G+ DV TY + GL +R ++ +
Sbjct: 487 SKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 265 KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQD 324
G P+V T++A++ Y K ++ A L M G PN+ TY++LI+ HC Q++
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 325 AMKVYDSM----------IY------KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
A ++++ M +Y P+ VTY L+ G+CK ++++A LL M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
+G P+ ++AL+ G CK G A+E+ + M +HG TY+ ++D FK
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
A + ++ + + ++ IY+ M+DGLC G+ +A + ++ KG + +V TYT M+
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMI 786
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
G G ++ +LL M KG PN TY + + + G + + L+ MK
Sbjct: 787 DGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 137/545 (25%), Positives = 234/545 (42%), Gaps = 59/545 (10%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A +++M A N + + Y A S+++ M G D+ T++
Sbjct: 429 LDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSK 488
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
V+N LC S+ +L F + M + GL D+ T T +V+ C G +EQA M E+G
Sbjct: 489 VLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
N T+ A+I+ K S A F+ + G ++ Y+A++D CK G V +A
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 230 GLWSEMTGK----------------GIQPDVVTYNCLTRGLFHCSRGKVLKK-------- 265
++ M G +P+VVTY L G R + +K
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
G P+ + A++D CK G + A+ + M+ G ++TY+SLI+ + + A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
KV M+ C P+ V Y +I G CK+ K D+A L+ M KG P++ T+ A++ G
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
F G EL+ M G P+ +TY +++D K A +L E+++ + H
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 446 ---------------------------------ITIYSIMLDGLCSYGRLKDAREFFSGL 472
+++Y +++D L RL+ A +
Sbjct: 849 TAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Query: 473 QAKGLKIDVF--TYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
+ + TY +++ LC ++ A QL +M +KG P ++ ++GL R
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Query: 531 DISRS 535
IS +
Sbjct: 969 KISEA 973
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 136/569 (23%), Positives = 228/569 (40%), Gaps = 83/569 (14%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+ L++L+V+ ++++ E +++ CR + LG +
Sbjct: 168 YNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLK 227
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQA------LGLA-MRMDEMGYRCNSYTHGAIINGL 184
P T ++ ++ A + LA +RMD RC +Y+ L
Sbjct: 228 DFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYS-------L 280
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
CKVG A+ VE F D YT ++ LC+ L EA+ + M P+V
Sbjct: 281 CKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNV 337
Query: 245 VTYNCLTRG------LFHCSR--GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
VTY+ L G L C R ++ +G P F+++V YC G + A +L+
Sbjct: 338 VTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKK 397
Query: 297 MARVGVEPNVFTYNSLINAHC---------LQD--------------------------- 320
M + G P YN LI + C L D
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 321 -----QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
+ + A V MI +G +P T TY+ +++ C KM+ A L EM GL D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
+ T+ +V FCKAG+ A++ + M++ G P+ +TY ++ K A L+
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLK----------------DAREFFSGLQAKGLKI 479
+ +I YS ++DG C G+++ D +F +
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637
Query: 480 DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYL 539
+V TY ++ G C+ +++A +LL M +GC PN Y+ + GL + G + +++
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 540 QLMKGKGFSADATTTELLIN-FFSGNKAD 567
M GF A T LI+ +F + D
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 224/497 (45%), Gaps = 28/497 (5%)
Query: 34 TPKRRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVK 93
T ++L+ + + ++ A F +M ++ +T++++ K A
Sbjct: 483 TSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFN 542
Query: 94 RMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEG 153
M +G + T+T +I+ + + + M G P+IVT + +++G C G
Sbjct: 543 EMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAG 602
Query: 154 NVEQALGLAMRM----------------DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYF 197
VE+A + RM D+ R N T+GA+++G CK A
Sbjct: 603 QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLL 662
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC 257
+ G + + VY A++D LCK G ++EA + +EM+ G + TY+ L F
Sbjct: 663 DAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKV 722
Query: 258 SR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
R K+L+ P+V ++ ++D CK G A +LM M G +PNV TY
Sbjct: 723 KRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTY 782
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
++I+ + +++ +++ + M KG P+ VTY LI CK +D A +LL EM
Sbjct: 783 TAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
+ ++ GF K + + L+ + + P Y +++D L K
Sbjct: 843 THWPTHTAGYRKVIEGFNKEF--IESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEM 900
Query: 430 AVSLYRELEKMN--LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIM 487
A+ L E+ + L + + Y+ +++ LC +++ A + FS + KG+ ++ ++ +
Sbjct: 901 ALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSL 960
Query: 488 VQGLCREGLLDDAEQLL 504
++GL R + +A LL
Sbjct: 961 IKGLFRNSKISEALLLL 977
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 184/467 (39%), Gaps = 84/467 (17%)
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGR--GFKFDVPVYTAIMDSL-------------- 219
+ +I L + SA I +F GR G+K PVY A++D +
Sbjct: 131 SESLVIEVLRLIARPSAVISFFVWA-GRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQ 189
Query: 220 ---------------------CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG----- 253
C++G + AL + +P TYNCL +
Sbjct: 190 QIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD 249
Query: 254 ------LFH----------------------CSRGK-------VLKKGIMPDVHTFSAIV 278
L H C GK V + +PD ++ ++
Sbjct: 250 RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLI 309
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
C+ + A + M PNV TY++L+ + Q+ +V + M+ +GC
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCY 369
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA---- 394
PS +N+L+H +C A LL +MV G P +N L+G C L
Sbjct: 370 PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLL 429
Query: 395 --AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIM 452
A++ S M G + ++I + L Y +A S+ RE+ + YS +
Sbjct: 430 DLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKV 489
Query: 453 LDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGC 512
L+ LC+ +++ A F ++ GL DV+TYTIMV C+ GL++ A + +M E GC
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 513 PPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
PN TY + L+ +S + + + M +G + T LI+
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/454 (23%), Positives = 189/454 (41%), Gaps = 63/454 (13%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A +FN+M + PN+ +T LI+ +K K + A L + M S G + T++
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 110 VINCLCRLSRTDL-----------------------------------------GFC--- 125
+I+ C+ + + GFC
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 126 -------VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHG 178
+L M G EP+ + +++GLC G +++A + M E G+ YT+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 179 AIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
++I+ KV A K+ +V +YT ++D LCK G +EA L M K
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 239 GIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
G QP+VVTY + G + ++ KG+ P+ T+ ++D+ CK G + A
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
L+ M + + Y +I + +++ + D + P Y LI
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEG--FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDN 891
Query: 351 WCKIKKMDKAMSLLGEMV--NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
K ++++ A+ LL E+ + L T+N+L+ C A A +L S M K G +
Sbjct: 892 LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVI 951
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
P+ ++ ++ GLF+ EA+ L + M +
Sbjct: 952 PEMQSFCSLIKGLFRNSKISEALLLLDFISHMEI 985
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 122/284 (42%), Gaps = 48/284 (16%)
Query: 66 FP-NIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGF 124
FP + ++ LI+ K+K A ++ +M + +T +I+ LC++ +TD +
Sbjct: 705 FPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY 764
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
++ +M + G +P++VT T +++G G +E L L RM G N T+ +I+
Sbjct: 765 KLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHC 824
Query: 185 CKVGNTSAA----------------IGYFKKVEGRGFKFD-----------------VPV 211
CK G A GY K +EG +F + V
Sbjct: 825 CKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSV 884
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMT--GKGIQPDVVTYNCLTRGLFHCSRGKV------- 262
Y ++D+L K + AL L E+ + TYN L L C KV
Sbjct: 885 YRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESL--CLANKVETAFQLF 942
Query: 263 ---LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
KKG++P++ +F +++ + I+ A L+ F++ + ++
Sbjct: 943 SEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQ 986
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 115/295 (38%), Gaps = 29/295 (9%)
Query: 286 MIARAERLMGFMA----RVGVEPNVFTYNSLIN-----------AHCLQDQMQDAMKVYD 330
+IAR ++ F ++G + YN+L++ LQ D +V+
Sbjct: 141 LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFG 200
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
+ N L+ C+ A+ LG + + P T+N L+ F KA
Sbjct: 201 EFL-----------NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKAD 249
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
+A + M D T L K + EA++L +E N Y+
Sbjct: 250 RLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYT 306
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
++ GLC ++A +F + ++A +V TY+ ++ G + L +++L M +
Sbjct: 307 KLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMME 366
Query: 511 GCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNK 565
GC P+ +N V GD S + K L+ M G +LI G+K
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK 421
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 245/520 (47%), Gaps = 19/520 (3%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTT---AISLVKRMHSLGIEADSFTFTI 109
A+D F +A FP+ +L+ +V+ + A +V + G+ D + FT
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTT 265
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
IN C+ + + + M + G+ P++VT T+++GL G ++A +M E G
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
T+ ++ GL + A K++ +GF +V VY ++DS + G +N+A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVD 279
+ M KG+ TYN L +G +C G+ +L G + +F++++
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKG--YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
C M A R +G M + P +LI+ C + A++++ + KG +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
T T N L+HG C+ K+D+A + E++ +G D ++N L+ G C A +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
M K G PD TY+I++ GLF + EA+ + + ++ + + YS+M+DG C
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
R ++ +EFF + +K ++ + Y +++ CR G L A +L DM+ KG PN TY
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 520 NLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
++G+ + ++ + M+ +G + LI+
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/546 (24%), Positives = 247/546 (45%), Gaps = 53/546 (9%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V+ AV F+KM PN+ F +I+ + Y A ++M G+E T++I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
++ L R R + VL M K G P+++ +++ G++ +A+ + M G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM------------- 216
S T+ +I G CK G A K++ GF + +T+++
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 217 ----------------------DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
LCK G ++AL LW + KG D T N L GL
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 255 FHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
C GK +L +G + D +++ ++ C + + A + M + G++P
Sbjct: 516 --CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
+ +TY+ LI +++++A++ +D G LP TY+ +I G CK ++ ++
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
EM++K + P+ +N L+ +C++G A EL M+ G P+ TY ++ G+
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
EA L+ E+ L+ ++ Y+ ++DG G++ + +K + + TY
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI------SRSEKY 538
T+M+ G R+G + +A +LL +M EKG P+ TY F+ G L++G + S E Y
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENY 813
Query: 539 LQLMKG 544
+++G
Sbjct: 814 AAIIEG 819
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 169/385 (43%), Gaps = 43/385 (11%)
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFH-------CSRGKVLKKGIMPDVHTFSAIVDN 280
AL ++ + KG+ P T N L L C V+ KG+ PDV+ F+ ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
+CK G + A +L M GV PNV T+N++I+ + + +A + M+ +G P+
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI------------------------ 376
+TY+ L+ G + K++ A +L EM KG P++
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 377 -----------CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
T+N L+ G+CK G A+ L+ M G ++ ++ ++ L
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
+ A+ E+ N+ + + ++ GLC +G+ A E + KG +D T
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
++ GLC G LD+A ++ ++ +GC + +YN + G + + + +L M +
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 546 GFSADATTTELLI-NFFSGNKADNT 569
G D T +LI F+ NK +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEA 594
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 37/307 (12%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
K +D A F ++M P+ +++LI + M AI G+ D +T+
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
+++I+ C+ RT+ G M ++P+ V ++ C G + AL L M
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G NS T+ ++I G+ + A F+++ G + +V YTA++D K G + +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI 287
L EM K + P+ +TY + ++ Y ++G +
Sbjct: 734 VECLLREMHSKNVHPNKITY---------------------------TVMIGGYARDGNV 766
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
A RL+ M G+ P+ TY I + Q + +A K D Y +
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEE----------NYAAI 816
Query: 348 IHGWCKI 354
I GW K+
Sbjct: 817 IEGWNKL 823
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 133/520 (25%), Positives = 245/520 (47%), Gaps = 19/520 (3%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTT---AISLVKRMHSLGIEADSFTFTI 109
A+D F +A FP+ +L+ +V+ + A +V + G+ D + FT
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK----GVSPDVYLFTT 265
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
IN C+ + + + M + G+ P++VT T+++GL G ++A +M E G
Sbjct: 266 AINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG 325
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
T+ ++ GL + A K++ +GF +V VY ++DS + G +N+A+
Sbjct: 326 MEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAI 385
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVD 279
+ M KG+ TYN L +G +C G+ +L G + +F++++
Sbjct: 386 EIKDLMVSKGLSLTSSTYNTLIKG--YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVIC 443
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
C M A R +G M + P +LI+ C + A++++ + KG +
Sbjct: 444 LLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
T T N L+HG C+ K+D+A + E++ +G D ++N L+ G C A +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
M K G PD TY+I++ GLF + EA+ + + ++ + + YS+M+DG C
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
R ++ +EFF + +K ++ + Y +++ CR G L A +L DM+ KG PN TY
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683
Query: 520 NLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
++G+ + ++ + M+ +G + LI+
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/546 (24%), Positives = 247/546 (45%), Gaps = 53/546 (9%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V+ AV F+KM PN+ F +I+ + Y A ++M G+E T++I
Sbjct: 276 VEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
++ L R R + VL M K G P+++ +++ G++ +A+ + M G
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 395
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM------------- 216
S T+ +I G CK G A K++ GF + +T+++
Sbjct: 396 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 455
Query: 217 ----------------------DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
LCK G ++AL LW + KG D T N L GL
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 255 FHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
C GK +L +G + D +++ ++ C + + A + M + G++P
Sbjct: 516 --CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKP 573
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
+ +TY+ LI +++++A++ +D G LP TY+ +I G CK ++ ++
Sbjct: 574 DNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFF 633
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
EM++K + P+ +N L+ +C++G A EL M+ G P+ TY ++ G+
Sbjct: 634 DEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 693
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
EA L+ E+ L+ ++ Y+ ++DG G++ + +K + + TY
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI------SRSEKY 538
T+M+ G R+G + +A +LL +M EKG P+ TY F+ G L++G + S E Y
Sbjct: 754 TVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEENY 813
Query: 539 LQLMKG 544
+++G
Sbjct: 814 AAIIEG 819
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 169/385 (43%), Gaps = 43/385 (11%)
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFH-------CSRGKVLKKGIMPDVHTFSAIVDN 280
AL ++ + KG+ P T N L L C V+ KG+ PDV+ F+ ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
+CK G + A +L M GV PNV T+N++I+ + + +A + M+ +G P+
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI------------------------ 376
+TY+ L+ G + K++ A +L EM KG P++
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 377 -----------CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
T+N L+ G+CK G A+ L+ M G ++ ++ ++ L
Sbjct: 390 LMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHL 449
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
+ A+ E+ N+ + + ++ GLC +G+ A E + KG +D T
Sbjct: 450 MFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSN 509
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
++ GLC G LD+A ++ ++ +GC + +YN + G + + + +L M +
Sbjct: 510 ALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKR 569
Query: 546 GFSADATTTELLI-NFFSGNKADNT 569
G D T +LI F+ NK +
Sbjct: 570 GLKPDNYTYSILICGLFNMNKVEEA 594
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 125/307 (40%), Gaps = 37/307 (12%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
K +D A F ++M P+ +++LI + M AI G+ D +T+
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
+++I+ C+ RT+ G M ++P+ V ++ C G + AL L M
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G NS T+ ++I G+ + A F+++ G + +V YTA++D K G + +
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 733
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI 287
L EM K + P+ +TY + ++ Y ++G +
Sbjct: 734 VECLLREMHSKNVHPNKITY---------------------------TVMIGGYARDGNV 766
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
A RL+ M G+ P+ TY I + Q + +A K D Y +
Sbjct: 767 TEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDEE----------NYAAI 816
Query: 348 IHGWCKI 354
I GW K+
Sbjct: 817 IEGWNKL 823
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 150/549 (27%), Positives = 246/549 (44%), Gaps = 54/549 (9%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ ++ D VDAA + F++M PN F +L+ K + L+ M S G
Sbjct: 153 LIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFG 212
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ + + +++ CR R D ++ M + GL PDIVT + ++ LC EG V A
Sbjct: 213 VLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDAS 272
Query: 160 GL--AMRMDE-MGY-RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
+ M +DE +G R NS T+ ++ G CKVG A F+ + + Y
Sbjct: 273 RIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIW 332
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFS 275
+ L + G EA + +MT KGI P + ++++
Sbjct: 333 LQGLVRHGKFIEAETVLKQMTDKGIGPSI---------------------------YSYN 365
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK 335
++D CK GM++ A+ ++G M R GV P+ TY L++ +C ++ A + M+
Sbjct: 366 ILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN 425
Query: 336 GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAA 395
CLP+ T N L+H K+ ++ +A LL +M KG D T N +V G C +G A
Sbjct: 426 NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKA 485
Query: 396 KELISTMQKHGQ-----------------------LPDRITYAIILDGLFKCHFYPEAVS 432
E++ M+ HG LPD ITY+ +L+GL K + EA +
Sbjct: 486 IEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
L+ E+ L Y+I + C G++ A ++ KG + TY ++ GL
Sbjct: 546 LFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLG 605
Query: 493 REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
+ + + L+ +M+EKG PN CTYN +Q L + + L M K + +
Sbjct: 606 IKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVF 665
Query: 553 TTELLINFF 561
+ + LI F
Sbjct: 666 SFKYLIEAF 674
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 200/400 (50%), Gaps = 14/400 (3%)
Query: 179 AIINGLCKVGNTSAAIGYFKKVEGR--GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
++++ K + A F+ V R K V +Y +++S K+ V L+ +M
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMV 139
Query: 237 GKGIQPDVVTYNCLTRGLFHCS--------RGKVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
GI P T+N L R L S ++ +KG P+ TF +V YCK G+
Sbjct: 140 LCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTD 199
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
+ L+ M GV PN YN+++++ C + + D+ K+ + M +G +P VT+N+ I
Sbjct: 200 KGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRI 259
Query: 349 HGWCKIKKMDKAMSLLGEM-VNKGL---TPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
CK K+ A + +M +++ L P+ T+N ++ GFCK G+ AK L ++++
Sbjct: 260 SALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRE 319
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD 464
+ L +Y I L GL + + EA ++ +++ + I Y+I++DGLC G L D
Sbjct: 320 NDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSD 379
Query: 465 AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
A+ ++ G+ D TY ++ G C G +D A+ LL +M C PN T N+ +
Sbjct: 380 AKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLH 439
Query: 525 GLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
L + G IS +E+ L+ M KG+ D T ++++ G+
Sbjct: 440 SLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 229/493 (46%), Gaps = 5/493 (1%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A F + + +++ + + + +V+ + A +++K+M GI +++ I
Sbjct: 307 LEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNI 366
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+++ LC+L ++GLM + G+ PD VT +++G C+ G V+ A L M
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
N+YT +++ L K+G S A +K+ +G+ D I+D LC G +++A+
Sbjct: 427 CLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAI 486
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
+ M G L +++ +PD+ T+S +++ CK G A
Sbjct: 487 EIVKGMRVHG----SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
A+ L M ++P+ YN I+ C Q ++ A +V M KGC S TYN+LI
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLIL 602
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
G ++ + L+ EM KG++P+ICT+N + C+ A L+ M + P
Sbjct: 603 GLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP 662
Query: 410 DRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFF 469
+ ++ +++ K + A ++ + + +YS+M + L + G+L A E
Sbjct: 663 NVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKE-GLYSLMFNELLAAGQLLKATELL 721
Query: 470 SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
+ +G ++ F Y +V+ LC++ L+ A +L M ++G + + GL +
Sbjct: 722 EAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKM 781
Query: 530 GDISRSEKYLQLM 542
G+ + + M
Sbjct: 782 GNKKEANSFADKM 794
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 122/461 (26%), Positives = 206/461 (44%), Gaps = 35/461 (7%)
Query: 136 EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG 195
+P + ++ E VE L M G +YT +I LC AA
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 196 YFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF 255
F ++ +G K + + ++ CK GL ++ L L + M G+ P+ V YN +
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 256 HCSRG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA---RVGV-E 303
R K+ ++G++PD+ TF++ + CKEG + A R+ M +G+
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
PN TYN ++ C ++DA +++S+ L S +YN + G + K +A ++
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
L +M +KG+ P I ++N L+ G CK GM AK ++ M+++G PD +TY +L G
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
A SL +E+ + N + +I+L L GR+ +A E + KG +D T
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 484 YTIMVQGLCREGLLDDAEQLLMDME-----------------------EKGCPPNDCTYN 520
I+V GLC G LD A +++ M E C P+ TY+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ GL + G + ++ M G+ D+ + I+ F
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF 569
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/441 (23%), Positives = 180/441 (40%), Gaps = 69/441 (15%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P+I + +L++ + K+ + A ++V M G+ D+ T+ +++ C + + D +
Sbjct: 359 PSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSL 418
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L M + P+ T +++ L G + +A L +M+E GY ++ T I++GLC
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 187 VGNTSAAIGYFKKVEGRGFKF-----------------------DVPVYTAIMDSLCKDG 223
G AI K + G D+ Y+ +++ LCK G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL----------KKGIMPDVHT 273
EA L++EM G+ +QPD V YN C +GK+ KKG + T
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHF--CKQGKISSAFRVLKDMEKKGCHKSLET 596
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
+++++ + I LM M G+ PN+ TYN+ I C ++++DA + D M+
Sbjct: 597 YNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMM 656
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMD----------------------------------K 359
K P+ ++ LI +CK+ D K
Sbjct: 657 QKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLK 716
Query: 360 AMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD 419
A LL ++++G + LV CK A ++ M G D ++D
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVID 776
Query: 420 GLFKCHFYPEAVSLYRELEKM 440
GL K EA S ++ +M
Sbjct: 777 GLGKMGNKKEANSFADKMMEM 797
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 233/513 (45%), Gaps = 25/513 (4%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++S L VD A FF + P++ +LIN + + A+ L M+ G
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+E DS T+ I+ L + V+ M GL PD++T T ++ G C GN++ L
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 160 GLAMRMDEMGYRCNSYTHGAI-INGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L M G+ NS ++ ++GLCK G A+ F +++ G D+ Y+ ++
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIM 268
LCK G + AL L+ EM K I P+ T+ L GL C +G +L+ G
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL--CQKGMLLEARSLLDSLISSGET 465
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
D+ ++ ++D Y K G I A L + G+ P+V T+NSLI +C + +A K+
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
D + G PS V+Y TL+ + L EM +G+ P T++ + G C+
Sbjct: 526 LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Query: 389 AG------------MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
+ K+ + M+ G PD+ITY I+ L + A
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
++ NLD Y+I++D LC YG ++ A F LQ + + + F YT +++ C +G
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
+ A +L + +G + Y+ + L RR
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 230/479 (48%), Gaps = 64/479 (13%)
Query: 141 TLTTIVNGLCAEGNVEQALGLAMRMDE---MGYRCNSYTHGAIINGLCKVGNTSAAIGYF 197
T +T+V+GLC + +E A+ L +R E +G S+ +I++G CK+G A +F
Sbjct: 189 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFN--SIMSGYCKLGFVDMAKSFF 245
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC 257
V G V + +++ LC G + EAL L S+M G++PD VTYN L +G FH
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG-FHL 304
Query: 258 ---------SRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN-VF 307
+L KG+ PDV T++ ++ C+ G I L+ M G E N +
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
+ +++ C ++ +A+ +++ M G P V Y+ +IHG CK+ K D A+ L EM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
+K + P+ T AL+ G C+ GM L A+ L+ ++ G+ D + Y I++DG K
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 428 PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR--------------------- 466
EA+ L++ + + + + ++ ++ G C + +AR
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 467 --------------EFFSGLQAKGLKIDVFTYTIMVQGLCR------------EGLLDDA 500
E ++A+G+ TY+++ +GLCR E + +
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+Q L DME +G PP+ TYN +Q L R +S + +L++MK + A + T +LI+
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/535 (23%), Positives = 241/535 (45%), Gaps = 25/535 (4%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ ++ AV F + P++ F +++ K+ A S + G+ ++
Sbjct: 201 QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSH 260
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
I+IN LC + + M K G+EPD VT + G G + A + M +
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS-LCKDGLVN 226
G + T+ ++ G C++GN + K + RGF+ + + ++M S LCK G ++
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSA 276
EAL L+++M G+ PD+V Y+ + GL C GK + K I+P+ T A
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGL--CKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
++ C++GM+ A L+ + G ++ YN +I+ + +++A++++ +I G
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
PS T+N+LI+G+CK + + +A +L + GL P + ++ L+ + G +
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 397 ELISTMQKHGQLPDRITYAIILDGL------------FKCHFYPEAVSLYRELEKMNLDR 444
EL M+ G P +TY++I GL + + + R++E +
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
Y+ ++ LC L A F ++++ L TY I++ LC G + A+ +
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
++E+ + Y ++ +GD + K + +GF+ +IN
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 179/362 (49%), Gaps = 13/362 (3%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------K 261
Y+ ++D LC+ + +A+ K I P VV++N + G +C G
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSG--YCKLGFVDMAKSFFCT 247
Query: 262 VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
VLK G++P V++ + +++ C G IA A L M + GVEP+ TYN L L
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD-ICTWN 380
+ A +V M+ KG P +TY L+ G C++ +D + LL +M+++G + I +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
++ G CK G A L + M+ G PD + Y+I++ GL K + A+ LY E+
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ + + +L GLC G L +AR L + G +D+ Y I++ G + G +++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
+L + E G P+ T+N + G + +I+ + K L ++K G + + L++
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 561 FS 562
++
Sbjct: 548 YA 549
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 183/373 (49%), Gaps = 13/373 (3%)
Query: 195 GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
G F+K E G +D+ ++ + + +V+++L + +M + + +YN + L
Sbjct: 115 GTFRKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSV---L 166
Query: 255 FHCSR----GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
+H V K+ + HT+S +VD C++ + A + + P+V ++N
Sbjct: 167 YHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFN 226
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
S+++ +C + A + +++ G +PS ++N LI+G C + + +A+ L +M
Sbjct: 227 SIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
G+ PD T+N L GF GM A E+I M G PD ITY I+L G +
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMG 346
Query: 431 VSLYRELEKMNLD-RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
+ L +++ + I S+ML GLC GR+ +A F+ ++A GL D+ Y+I++
Sbjct: 347 LVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH 406
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
GLC+ G D A L +M +K PN T+ + GL ++G + + L + G +
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 550 DATTTELLINFFS 562
D ++I+ ++
Sbjct: 467 DIVLYNIVIDGYA 479
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%)
Query: 77 NLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLE 136
N V++ + + ++ M S GI D T+ +I LCR+ F L +M L+
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 137 PDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY 196
T +++ LC G + +A + E + + + +I C G+ A+
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 712
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
F ++ RGF + Y+A+++ LC+ L+N
Sbjct: 713 FHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 102/261 (39%), Gaps = 26/261 (9%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A++ F + P++ F LI K ++ A ++ + G+ ++T
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR----- 164
+++ T + M G+ P VT + I GLC G + +R
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFE 602
Query: 165 --------MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
M+ G + T+ II LC+V + S A + + ++ R Y ++
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKG 266
DSLC G + +A + + + Y L + HC +G ++L +G
Sbjct: 663 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA--HCVKGDPEMAVKLFHQLLHRG 720
Query: 267 IMPDVHTFSAIVDNYCKEGMI 287
+ +SA+++ C+ ++
Sbjct: 721 FNVSIRDYSAVINRLCRRHLM 741
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/513 (27%), Positives = 233/513 (45%), Gaps = 25/513 (4%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++S L VD A FF + P++ +LIN + + A+ L M+ G
Sbjct: 228 IMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG 287
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+E DS T+ I+ L + V+ M GL PD++T T ++ G C GN++ L
Sbjct: 288 VEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 347
Query: 160 GLAMRMDEMGYRCNSYTHGAI-INGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L M G+ NS ++ ++GLCK G A+ F +++ G D+ Y+ ++
Sbjct: 348 VLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHG 407
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIM 268
LCK G + AL L+ EM K I P+ T+ L GL C +G +L+ G
Sbjct: 408 LCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL--CQKGMLLEARSLLDSLISSGET 465
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
D+ ++ ++D Y K G I A L + G+ P+V T+NSLI +C + +A K+
Sbjct: 466 LDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKI 525
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
D + G PS V+Y TL+ + L EM +G+ P T++ + G C+
Sbjct: 526 LDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCR 585
Query: 389 AG------------MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
+ K+ + M+ G PD+ITY I+ L + A
Sbjct: 586 GWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
++ NLD Y+I++D LC YG ++ A F LQ + + + F YT +++ C +G
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
+ A +L + +G + Y+ + L RR
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 134/479 (27%), Positives = 230/479 (48%), Gaps = 64/479 (13%)
Query: 141 TLTTIVNGLCAEGNVEQALGLAMRMDE---MGYRCNSYTHGAIINGLCKVGNTSAAIGYF 197
T +T+V+GLC + +E A+ L +R E +G S+ +I++G CK+G A +F
Sbjct: 189 TYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFN--SIMSGYCKLGFVDMAKSFF 245
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC 257
V G V + +++ LC G + EAL L S+M G++PD VTYN L +G FH
Sbjct: 246 CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG-FHL 304
Query: 258 ---------SRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN-VF 307
+L KG+ PDV T++ ++ C+ G I L+ M G E N +
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
+ +++ C ++ +A+ +++ M G P V Y+ +IHG CK+ K D A+ L EM
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
+K + P+ T AL+ G C+ GM L A+ L+ ++ G+ D + Y I++DG K
Sbjct: 425 CDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCI 484
Query: 428 PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR--------------------- 466
EA+ L++ + + + + ++ ++ G C + +AR
Sbjct: 485 EEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Query: 467 --------------EFFSGLQAKGLKIDVFTYTIMVQGLCR------------EGLLDDA 500
E ++A+G+ TY+++ +GLCR E + +
Sbjct: 545 MDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKC 604
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+Q L DME +G PP+ TYN +Q L R +S + +L++MK + A + T +LI+
Sbjct: 605 KQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILID 663
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 125/535 (23%), Positives = 241/535 (45%), Gaps = 25/535 (4%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ ++ AV F + P++ F +++ K+ A S + G+ ++
Sbjct: 201 QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSH 260
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
I+IN LC + + M K G+EPD VT + G G + A + M +
Sbjct: 261 NILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLD 320
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS-LCKDGLVN 226
G + T+ ++ G C++GN + K + RGF+ + + ++M S LCK G ++
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSA 276
EAL L+++M G+ PD+V Y+ + GL C GK + K I+P+ T A
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGL--CKLGKFDMALWLYDEMCDKRILPNSRTHGA 438
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
++ C++GM+ A L+ + G ++ YN +I+ + +++A++++ +I G
Sbjct: 439 LLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETG 498
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
PS T+N+LI+G+CK + + +A +L + GL P + ++ L+ + G +
Sbjct: 499 ITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSID 558
Query: 397 ELISTMQKHGQLPDRITYAIILDGL------------FKCHFYPEAVSLYRELEKMNLDR 444
EL M+ G P +TY++I GL + + + R++E +
Sbjct: 559 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPP 618
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
Y+ ++ LC L A F ++++ L TY I++ LC G + A+ +
Sbjct: 619 DQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFI 678
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
++E+ + Y ++ +GD + K + +GF+ +IN
Sbjct: 679 YSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 179/362 (49%), Gaps = 13/362 (3%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------K 261
Y+ ++D LC+ + +A+ K I P VV++N + G +C G
Sbjct: 190 YSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSG--YCKLGFVDMAKSFFCT 247
Query: 262 VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
VLK G++P V++ + +++ C G IA A L M + GVEP+ TYN L L
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD-ICTWN 380
+ A +V M+ KG P +TY L+ G C++ +D + LL +M+++G + I +
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCS 367
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
++ G CK G A L + M+ G PD + Y+I++ GL K + A+ LY E+
Sbjct: 368 VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ + + +L GLC G L +AR L + G +D+ Y I++ G + G +++A
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEA 487
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
+L + E G P+ T+N + G + +I+ + K L ++K G + + L++
Sbjct: 488 LELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 561 FS 562
++
Sbjct: 548 YA 549
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 183/373 (49%), Gaps = 13/373 (3%)
Query: 195 GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
G F+K E G +D+ ++ + + +V+++L + +M + + +YN + L
Sbjct: 115 GTFRKWESTGLVWDMLLFLS-----SRLRMVDDSLYILKKMKDQNLNVSTQSYNSV---L 166
Query: 255 FHCSR----GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
+H V K+ + HT+S +VD C++ + A + + P+V ++N
Sbjct: 167 YHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFN 226
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
S+++ +C + A + +++ G +PS ++N LI+G C + + +A+ L +M
Sbjct: 227 SIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKH 286
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
G+ PD T+N L GF GM A E+I M G PD ITY I+L G +
Sbjct: 287 GVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMG 346
Query: 431 VSLYRELEKMNLD-RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
+ L +++ + I S+ML GLC GR+ +A F+ ++A GL D+ Y+I++
Sbjct: 347 LVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH 406
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
GLC+ G D A L +M +K PN T+ + GL ++G + + L + G +
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 550 DATTTELLINFFS 562
D ++I+ ++
Sbjct: 467 DIVLYNIVIDGYA 479
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%)
Query: 77 NLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLE 136
N V++ + + ++ M S GI D T+ +I LCR+ F L +M L+
Sbjct: 593 NHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLD 652
Query: 137 PDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY 196
T +++ LC G + +A + E + + + +I C G+ A+
Sbjct: 653 ASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKL 712
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
F ++ RGF + Y+A+++ LC+ L+N
Sbjct: 713 FHQLLHRGFNVSIRDYSAVINRLCRRHLMN 742
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/261 (19%), Positives = 102/261 (39%), Gaps = 26/261 (9%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A++ F + P++ F LI K ++ A ++ + G+ ++T
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR----- 164
+++ T + M G+ P VT + I GLC G + +R
Sbjct: 544 LMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLC-RGWKHENCNHVLRERIFE 602
Query: 165 --------MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
M+ G + T+ II LC+V + S A + + ++ R Y ++
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILI 662
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKG 266
DSLC G + +A + + + Y L + HC +G ++L +G
Sbjct: 663 DSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKA--HCVKGDPEMAVKLFHQLLHRG 720
Query: 267 IMPDVHTFSAIVDNYCKEGMI 287
+ +SA+++ C+ ++
Sbjct: 721 FNVSIRDYSAVINRLCRRHLM 741
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 143/576 (24%), Positives = 256/576 (44%), Gaps = 63/576 (10%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAI-NPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS 97
+L + + ++ AV+ ++ + + + P++ L++L+VK + A + M
Sbjct: 139 HVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCD 198
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
G D+++ I++ +C + ++G ++ + G P+IV TI+ G C G++E
Sbjct: 199 RGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIEN 258
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
A + + G+ T G +ING CK G+ A+ +V+ RG + V I+D
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGI 267
+ + G + + +PDV TYN L L C GK KKG+
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRL--CKEGKKEVAVGFLDEASKKGL 376
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
+P+ +++ ++ YCK A +L+ MA G +P++ TY LI+ + M DA+
Sbjct: 377 IPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVN 436
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW-------- 379
+ +I +G P YN L+ G CK + A L EM+++ + PD +
Sbjct: 437 MKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 380 ---------------------------NALVGGFCKAGMPLAAKELISTMQKHGQLPDRI 412
NA++ GFC++GM A ++ M + +PD+
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Query: 413 TYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGL 472
TY+ I+DG K A+ ++R +EK ++ Y+ +++G C G K A E F +
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEM 616
Query: 473 QAKGLKIDVFTYTIMVQGLCRE-GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR-- 529
Q + L +V TYT +++ L +E L+ A M C PN+ T+N +QG +++
Sbjct: 617 QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS 676
Query: 530 ------------GDISRSEKYLQLMKGKGFSADATT 553
G S ++ MK G+S A
Sbjct: 677 GKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAA 712
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 203/435 (46%), Gaps = 12/435 (2%)
Query: 137 PDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY 196
PD++ ++++ L + A + M + G ++Y+ ++ G+C G
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH 256
+ G+G ++ Y I+ CK G + A ++ E+ KG P + T+ + G
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGF-- 285
Query: 257 CSRG----------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
C G +V ++G+ V + I+D + G +G++ +P+V
Sbjct: 286 CKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDV 345
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
TYN LIN C + + + A+ D KG +P+ ++Y LI +CK K+ D A LL +
Sbjct: 346 ATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQ 405
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M +G PDI T+ L+ G +G A + + G PD Y +++ GL K
Sbjct: 406 MAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGR 465
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+ A L+ E+ N+ +Y+ ++DG G +AR+ FS KG+K+DV +
Sbjct: 466 FLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNA 525
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
M++G CR G+LD+A + M E+ P+ TY+ + G +++ D++ + K + M+
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 547 FSADATTTELLINFF 561
+ T LIN F
Sbjct: 586 CKPNVVTYTSLINGF 600
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 203/442 (45%), Gaps = 38/442 (8%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ + +LIN + K A+ + G+ ++ ++ +I C+ D+ +
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L M + G +PDIVT +++GL G+++ A+ + +++ + G ++ + +++GLCK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G A F ++ R D VY ++D + G +EA ++S KG++ DVV
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 247 YNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
+N + +G C G ++ ++ ++PD T+S I+D Y K+ +A A ++ +
Sbjct: 523 HNAMIKGF--CRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRY 580
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M + +PNV TY SLIN C Q + A + + M + +P+ VTY TLI K
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640
Query: 357 -MDKAMSLLGEMVNKGLTPDICTWNALVGGFCK--AGMPLAAKELISTMQKHGQLPDRIT 413
++KA+ M+ P+ T+N L+ GF K +G LA + HGQ
Sbjct: 641 TLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPD----GSNHGQ------ 690
Query: 414 YAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
LF + ++ H Y+ L LC +G +K A F +
Sbjct: 691 -----SSLFS--------EFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMV 737
Query: 474 AKGLKIDVFTYTIMVQGLCREG 495
KG D ++ ++ G C G
Sbjct: 738 KKGFSPDPVSFAAILHGFCVVG 759
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 130/300 (43%), Gaps = 14/300 (4%)
Query: 56 FFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLC 115
F++M N P+ + LI+ ++ + A + G++ D +I C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 116 RLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSY 175
R D + M + L PD T +TI++G + ++ A+ + M++ + N
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVV 591
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG-LVNEALGLWSE 234
T+ ++ING C G+ A FK+++ R +V YT ++ SL K+ + +A+ W
Sbjct: 592 TYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLM 294
M P+ VT+NCL +G + GKVL + PD G +
Sbjct: 652 MMTNKCVPNEVTFNCLLQGFVKKTSGKVLAE---PDGSN----------HGQSSLFSEFF 698
Query: 295 GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
M G + YNS + C+ ++ A D M+ KG P V++ ++HG+C +
Sbjct: 699 HRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVV 758
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 119/276 (43%), Gaps = 1/276 (0%)
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI-YKGCLPSTVTYNTLIH 349
E ++G + V+ + +++A+ + A+++YD ++ +P + N+L+
Sbjct: 119 EDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLS 178
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
K +++ A + EM ++G + D + LV G C G ++LI G +P
Sbjct: 179 LLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIP 238
Query: 410 DRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFF 469
+ + Y I+ G K A +++EL+ + + M++G C G +
Sbjct: 239 NIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLL 298
Query: 470 SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
S ++ +GL++ V+ ++ R G D + + + C P+ TYN+ + L +
Sbjct: 299 SEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 530 GDISRSEKYLQLMKGKGFSADATTTELLINFFSGNK 565
G + +L KG + + LI + +K
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSK 394
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 150/546 (27%), Positives = 249/546 (45%), Gaps = 53/546 (9%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P+ + +T +I VK + AI L M S GI + T +I C+ + +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M K G P+ VT + ++ G +E+AL +M+ +G + + II G K
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLK 421
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
A+ F + G +V V I+ LCK G +EA L S+M +GI P+VV+
Sbjct: 422 GQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVS 480
Query: 247 YNCLTRGLFHCSR----------GKVLKKGIMPDVHTFSAIVDN---------------- 280
YN + G HC + +L+KG+ P+ +T+S ++D
Sbjct: 481 YNNVMLG--HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNH 538
Query: 281 -------------------YCKEGMIARAERLMGFM---ARVGVEPNVFTYNSLINAHCL 318
CK G ++A L+ M R+ V + +YNS+I+
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCV--SCMSYNSIIDGFFK 596
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
+ +M A+ Y+ M G P+ +TY +L++G CK +MD+A+ + EM NKG+ DI
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPA 656
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
+ AL+ GFCK +A L S + + G P + Y ++ G A+ LY+++
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKML 716
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
K L + Y+ ++DGL G L A E ++ +QA GL D YT++V GL ++G
Sbjct: 717 KDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 499 DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
++ +M++ PN YN + G R G++ + + M KG D T ++L+
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Query: 559 NFFSGN 564
+ GN
Sbjct: 837 SGQVGN 842
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/564 (23%), Positives = 248/564 (43%), Gaps = 44/564 (7%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LL++ + D AVD N+M ++ P ++ +V+ T A L RM ++G
Sbjct: 169 LLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIG 228
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIV------------------- 140
++ D+ T +++ R + VL + G EPD +
Sbjct: 229 VDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMAN 288
Query: 141 -----------------TLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIING 183
T T+++ +GN++ A+ L M G N ++I G
Sbjct: 289 SLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITG 348
Query: 184 LCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
CK + +A+ F K+E G + ++ +++ K+G + +AL + +M G+ P
Sbjct: 349 HCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPS 408
Query: 244 VVTYNCLTRGLF----HCSRGKVLKKGI---MPDVHTFSAIVDNYCKEGMIARAERLMGF 296
V + + +G H K+ + + +V + I+ CK+G A L+
Sbjct: 409 VFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSK 468
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M G+ PNV +YN+++ HC Q M A V+ +++ KG P+ TY+ LI G +
Sbjct: 469 MESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHD 528
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL-PDRITYA 415
A+ ++ M + + + + ++ G CK G A+EL++ M + +L ++Y
Sbjct: 529 EQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYN 588
Query: 416 IILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK 475
I+DG FK AV+ Y E+ + ++ Y+ +++GLC R+ A E ++ K
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648
Query: 476 GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRS 535
G+K+D+ Y ++ G C+ ++ A L ++ E+G P+ YN + G G++ +
Sbjct: 649 GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 536 EKYLQLMKGKGFSADATTTELLIN 559
+ M G D T LI+
Sbjct: 709 LDLYKKMLKDGLRCDLGTYTTLID 732
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/520 (24%), Positives = 232/520 (44%), Gaps = 54/520 (10%)
Query: 91 LVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKM----------------- 133
LV S G E +S F ++N + +TD ++ M ++
Sbjct: 150 LVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALV 209
Query: 134 ------------------GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSY 175
G++ D VT ++ E +AL + R E G +S
Sbjct: 210 QRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSL 269
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP---VYTAIMDSLCKDGLVNEALGLW 232
+ + CK + + A ++++ + K VP YT+++ + K G +++A+ L
Sbjct: 270 LYSLAVQACCKTLDLAMANSLLREMKEK--KLCVPSQETYTSVILASVKQGNMDDAIRLK 327
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYC 282
EM GI +VV L G HC K+ K+G P+ TFS +++ +
Sbjct: 328 DEMLSDGISMNVVAATSLITG--HCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
K G + +A M +G+ P+VF +++I + ++A+K++D G L +
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVF 444
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
NT++ CK K D+A LL +M ++G+ P++ ++N ++ G C+ A+ + S +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 403 QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
+ G P+ TY+I++DG F+ H A+ + + N++ + +Y +++GLC G+
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 463 KDAREFFSGL-QAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNL 521
ARE + + + K L + +Y ++ G +EG +D A +M G PN TY
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624
Query: 522 FVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ GL + + ++ + MK KG D LI+ F
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGF 664
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 171/360 (47%), Gaps = 9/360 (2%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
K +D A F+ + PN +++LI+ + A+ +V M S IE + +
Sbjct: 492 KNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVY 551
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMG-LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+IN LC++ +T +L M + L ++ +I++G EG ++ A+ M
Sbjct: 552 QTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMC 611
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
G N T+ +++NGLCK A+ +++ +G K D+P Y A++D CK +
Sbjct: 612 GNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNME 671
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIV 278
A L+SE+ +G+ P YN L G + K+LK G+ D+ T++ ++
Sbjct: 672 SASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI 731
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
D K+G + A L M VG+ P+ Y ++N + Q +K+++ M
Sbjct: 732 DGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVT 791
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+ + YN +I G + +D+A L EM++KG+ PD T++ LV G P+ A L
Sbjct: 792 PNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 114/275 (41%), Gaps = 55/275 (20%)
Query: 34 TPKRRELLSSMRDLK--------------------TVDAAVDFFNKMAAINPFPNIKEFT 73
T K RELL++M + K +D+AV + +M PN+ +T
Sbjct: 564 TSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYT 623
Query: 74 VLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKM 133
L+N + K A+ + M + G++ D + +I+ C+ S + + + +
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 134 GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
GL P ++++G GN+ AL L +M + G RC+ T+ +I+GL K GN A
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILA 743
Query: 194 IGYFKKVEGRGFKFDVPVYTAIMDSLCK-------------------------------- 221
+ +++ G D +YT I++ L K
Sbjct: 744 SELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAG 803
Query: 222 ---DGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
+G ++EA L EM KGI PD T++ L G
Sbjct: 804 HYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 75/155 (48%), Gaps = 2/155 (1%)
Query: 35 PKRRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKR 94
P L+S R+L + AA+D + KM ++ +T LI+ ++K + A L
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE 749
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN 154
M ++G+ D +T+++N L + + + M K + P+++ ++ G EGN
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 155 VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
+++A L M + G + T +++G +VGN
Sbjct: 810 LDEAFRLHDEMLDKGILPDGATFDILVSG--QVGN 842
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/381 (29%), Positives = 198/381 (51%), Gaps = 27/381 (7%)
Query: 178 GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTG 237
G +++ + K+ T G++ ++ GF +V V+ +M+ CK+G +++A ++ E+T
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITK 268
Query: 238 KGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
+ +QP VV++N +++ YCK G + RL M
Sbjct: 269 RSLQPTVVSFN---------------------------TLINGYCKVGNLDEGFRLKHQM 301
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
+ P+VFTY++LINA C +++M A ++D M +G +P+ V + TLIHG + ++
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
D +M++KGL PDI +N LV GFCK G +AA+ ++ M + G PD+ITY +
Sbjct: 362 DLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTL 421
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
+DG + A+ + +E+++ ++ +S ++ G+C GR+ DA + G+
Sbjct: 422 IDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGI 481
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
K D TYT+M+ C++G +LL +M+ G P+ TYN+ + GL + G + ++
Sbjct: 482 KPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADM 541
Query: 538 YLQLMKGKGFSADATTTELLI 558
L M G D T L+
Sbjct: 542 LLDAMLNIGVVPDDITYNTLL 562
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 185/390 (47%), Gaps = 21/390 (5%)
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
G M + + G+ N Y ++N CK GN S A F ++ R + V + +++
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGY 285
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMP 269
CK G ++E L +M +PDV TY+ L L C K + K+G++P
Sbjct: 286 CKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINAL--CKENKMDGAHGLFDEMCKRGLIP 343
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+ F+ ++ + + G I + M G++P++ YN+L+N C + A +
Sbjct: 344 NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIV 403
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
D MI +G P +TY TLI G+C+ ++ A+ + EM G+ D ++ALV G CK
Sbjct: 404 DGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKE 463
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH---I 446
G + A+ + M + G PD +TY +++D K +A + ++ L++M D H +
Sbjct: 464 GRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK---KGDAQTGFKLLKEMQSDGHVPSV 520
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
Y+++L+GLC G++K+A + G+ D TY +++G R ++ + +
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA---NSSKRYIQ 577
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
E G + +Y V L R R+
Sbjct: 578 KPEIGIVADLASYKSIVNELDRASKDHRNR 607
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 163/331 (49%), Gaps = 13/331 (3%)
Query: 66 FP-NIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGF 124
FP N+ F +L+N K + + A + + ++ +F +IN C++ D GF
Sbjct: 236 FPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGF 295
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
+ M K PD+ T + ++N LC E ++ A GL M + G N +I+G
Sbjct: 296 RLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGH 355
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
+ G ++K+ +G + D+ +Y +++ CK+G + A + M +G++PD
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDK 415
Query: 245 VTYNCLTRGLFHCSRGKVL----------KKGIMPDVHTFSAIVDNYCKEGMIARAERLM 294
+TY L G C G V + GI D FSA+V CKEG + AER +
Sbjct: 416 ITYTTLIDGF--CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERAL 473
Query: 295 GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
M R G++P+ TY +++A C + Q K+ M G +PS VTYN L++G CK+
Sbjct: 474 REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKL 533
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
+M A LL M+N G+ PD T+N L+ G
Sbjct: 534 GQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 177/368 (48%), Gaps = 11/368 (2%)
Query: 134 GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
G ++ ++N C EGN+ A + + + + + +ING CKVGN
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 194 IGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
++E + DV Y+A++++LCK+ ++ A GL+ EM +G+ P+ V + L G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 254 --------LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
L S K+L KG+ PD+ ++ +V+ +CK G + A ++ M R G+ P+
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
TY +LI+ C ++ A+++ M G V ++ L+ G CK ++ A L
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
EM+ G+ PD T+ ++ FCK G +L+ MQ G +P +TY ++L+GL K
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
A L + + + Y+ +L+G + R ++ + + G+ D+ +Y
Sbjct: 535 QMKNADMLLDAMLNIGVVPDDITYNTLLEG---HHRHANSSKRYIQKPEIGIVADLASYK 591
Query: 486 IMVQGLCR 493
+V L R
Sbjct: 592 SIVNELDR 599
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 133/261 (50%)
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
G NV+ +N L+N C + + DA KV+D + + P+ V++NTLI+G+CK+ +D+
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
L +M PD+ T++AL+ CK A L M K G +P+ + + ++ G
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
+ Y+++ L I +Y+ +++G C G L AR G+ +GL+ D
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
TYT ++ G CR G ++ A ++ +M++ G + ++ V G+ + G + +E+ L+
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 541 LMKGKGFSADATTTELLINFF 561
M G D T ++++ F
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAF 495
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 131/307 (42%), Gaps = 30/307 (9%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A F++M PN FT LI+ + ++M S G++ D +
Sbjct: 326 MDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNT 385
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
++N C+ ++ M + GL PD +T TT+++G C G+VE AL + MD+ G
Sbjct: 386 LVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNG 445
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ A++ G+CK G A +++ G K D YT +MD+ CK G
Sbjct: 446 IELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGF 505
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
L EM G P VVTYN L GL CK G +
Sbjct: 506 KLLKEMQSDGHVPSVVTYNVLLNGL---------------------------CKLGQMKN 538
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
A+ L+ M +GV P+ TYN+L+ H + ++ K Y G + +Y ++++
Sbjct: 539 ADMLLDAMLNIGVVPDDITYNTLLEGH---HRHANSSKRYIQKPEIGIVADLASYKSIVN 595
Query: 350 GWCKIKK 356
+ K
Sbjct: 596 ELDRASK 602
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 88/196 (44%)
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
E+++ G ++ +N L+ FCK G A+++ + K P +++ +++G K
Sbjct: 230 EILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVG 289
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
E L ++EK + YS +++ LC ++ A F + +GL + +T
Sbjct: 290 NLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
++ G R G +D ++ M KG P+ YN V G + GD+ + + M +
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 546 GFSADATTTELLINFF 561
G D T LI+ F
Sbjct: 410 GLRPDKITYTTLIDGF 425
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 101/258 (39%), Gaps = 40/258 (15%)
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW--NALVGGFCKAGMPLAAKELISTM 402
+LI K + A S+ +V +TP +C + +AL+ + G A +
Sbjct: 138 QSLIELVVSRKGKNSASSVFISLVEMRVTP-MCGFLVDALMITYTDLGFIPDAIQCFRLS 196
Query: 403 QKHG-QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
+KH +P R +LD + K + Y E+ ++ +++I+++ C G
Sbjct: 197 RKHRFDVPIR-GCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGN 255
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME------------- 508
+ DA++ F + + L+ V ++ ++ G C+ G LD+ +L ME
Sbjct: 256 ISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSA 315
Query: 509 ----------------------EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
++G PND + + G R G+I ++ Q M KG
Sbjct: 316 LINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 547 FSADATTTELLINFFSGN 564
D L+N F N
Sbjct: 376 LQPDIVLYNTLVNGFCKN 393
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 159/601 (26%), Positives = 258/601 (42%), Gaps = 112/601 (18%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN+ +T L++ + ++ LV+R+ G E D ++ I+ +
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M + G+ D+V+ + +++GL EGNVE+ALGL +M + G N T+ AII GLCK
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+G A F ++ G + D +Y ++D +C+ G +N A + +M +GIQP ++T
Sbjct: 325 MGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILT 384
Query: 247 YNCLTRGLFHCSRGKV-----LKKGIMPDVHTFSAIVDNYCKE----------------- 284
YN + GL C G+V + KG++ DV T+S ++D+Y K
Sbjct: 385 YNTVINGL--CMAGRVSEADEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAK 442
Query: 285 ------------------GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
G A+ L M + + P+ TY ++I +C Q+++A+
Sbjct: 443 IPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEAL 502
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV--- 383
++++ + K + + V YN +I CK +D A +L E+ KGL DI T L+
Sbjct: 503 EMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSI 561
Query: 384 ---GG-----------------------------FCKAGMPLAAKELISTMQKHG---QL 408
GG CK G AA E+ M++ G
Sbjct: 562 HANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTF 621
Query: 409 P-------------------------------DRITYAIILDGLFKCHFYPEAVSLYREL 437
P D I Y II++GL K F +A++L
Sbjct: 622 PSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFA 681
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLL 497
+ + + Y+ +++GLC G L +A F L+ GL TY I++ LC+EGL
Sbjct: 682 KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLF 741
Query: 498 DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
DAE+LL M KG PN YN V G + G + + + + DA T +
Sbjct: 742 LDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSM 801
Query: 558 I 558
I
Sbjct: 802 I 802
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/504 (26%), Positives = 242/504 (48%), Gaps = 21/504 (4%)
Query: 66 FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEA--DSFTFTIVINCLCRLSRTDLG 123
FP+ F LI V+ AI +++ M + + D+F + VI+ C++ + +L
Sbjct: 131 FPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELA 190
Query: 124 FCVLGLMFKMG-LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIIN 182
G L P++VT TT+V+ LC G V++ L R+++ G+ + + I+
Sbjct: 191 LGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIH 250
Query: 183 GLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQP 242
G K G A+ +++ +G DV Y+ ++D L K+G V EALGL +M +G++P
Sbjct: 251 GYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEP 310
Query: 243 DVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAER 292
+++TY + RGL C GK +L GI D + ++D C++G + RA
Sbjct: 311 NLITYTAIIRGL--CKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 293 LMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWC 352
++G M + G++P++ TYN++IN C+ ++ +A +V KG + +TY+TL+ +
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYI 423
Query: 353 KIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRI 412
K++ +D + + + + D+ N L+ F G A L M + PD
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 413 TYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGL 472
TYA ++ G K EA+ ++ EL K ++ + Y+ ++D LC G L A E L
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC-YNRIIDALCKKGMLDTATEVLIEL 542
Query: 473 QAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
KGL +D+ T ++ + G L+ +E+ N + L +RG
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSF 602
Query: 533 SRSEKYLQLMKGKGFSADATTTEL 556
+ + +M+ KG + +T L
Sbjct: 603 EAAIEVYMIMRRKGLTVTFPSTIL 626
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/445 (25%), Positives = 213/445 (47%), Gaps = 17/445 (3%)
Query: 134 GLEPDIVTLTTIVNGLCAEGNVEQALGL--AMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
G P +T +++ +G ++ A+ + M + Y +++ A+I+G CK+G
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 192 AAIGYFKKVEGRGFKF-DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL 250
A+G+F+ G ++ YT ++ +LC+ G V+E L + +G + D V Y+
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 251 TRGLFH--------CSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV 302
G F ++++KG+ DV ++S ++D KEG + A L+G M + GV
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
EPN+ TY ++I C ++++A +++ ++ G Y TLI G C+ +++A S
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
+LG+M +G+ P I T+N ++ G C AG A E+ G + D ITY+ +LD
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYI 423
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVF 482
K + + R + + + + +I+L G +A + + L D
Sbjct: 424 KVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTA 483
Query: 483 TYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
TY M++G C+ G +++A ++ ++ + C YN + L ++G + + + L +
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC-YNRIIDALCKKGMLDTATEVLIEL 542
Query: 543 KGKGFSADATTTELLINFFSGNKAD 567
KG D T+ L++ N D
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGGD 567
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 134/573 (23%), Positives = 249/573 (43%), Gaps = 89/573 (15%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V+ A+ KM PN+ +T +I + KM A L R+ S+GIE D F +
Sbjct: 293 VEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVT 352
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM- 168
+I+ +CR + F +LG M + G++P I+T T++NGLC G V +A DE+
Sbjct: 353 LIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-------DEVS 405
Query: 169 -GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G + T+ +++ KV N A + ++ D+ + ++ + G E
Sbjct: 406 KGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGE 465
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV---------LKKGIMPDVHTFSAIV 278
A L+ M + PD TY + +G +C G++ L+K + ++ I+
Sbjct: 466 ADALYRAMPEMDLTPDTATYATMIKG--YCKTGQIEEALEMFNELRKSSVSAAVCYNRII 523
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA-H--------------------- 316
D CK+GM+ A ++ + G+ ++ T +L+++ H
Sbjct: 524 DALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSD 583
Query: 317 -------------CLQDQMQDAMKVYDSMIYKG---CLPSTV------------------ 342
C + + A++VY M KG PST+
Sbjct: 584 VCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVV 643
Query: 343 -------------TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
Y +I+G CK + KA++L ++G+T + T+N+L+ G C+
Sbjct: 644 NAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQ 703
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
G + A L +++ G +P +TY I++D L K + +A L + L +I IY
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIY 763
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
+ ++DG C G+ +DA S + D FT + M++G C++G +++A + + ++
Sbjct: 764 NSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKD 823
Query: 510 KGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
K + + ++G +G + + L+ M
Sbjct: 824 KNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 155/350 (44%), Gaps = 61/350 (17%)
Query: 138 DIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYF 197
D++ T I+NGLC EG + +AL L G N+ T+ ++INGLC+ G A+ F
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC 257
+E G Y ++D+LCK+GL +A L M KG+ P+++ YN
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYN--------- 764
Query: 258 SRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC 317
+IVD YCK G A R++ V P+ FT +S+I +C
Sbjct: 765 ------------------SIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
+ M++A+ V+ K + LI G+C +M++A LL EM+
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREML--------- 857
Query: 378 TWNALVGGFCKAGMPLAAKELIS----TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSL 433
++V + LA E I + + G++P I ILD + YP +L
Sbjct: 858 VSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIK---ILDEI-SSTIYPSGKNL 913
Query: 434 --YRELEKMN-------------LDRHITIYSIMLDGLCSYGRLKDAREF 468
Y+ L+ +N D H +++S + LC+ G+L+ A EF
Sbjct: 914 GSYQRLQFLNDVNEEEIKKKDYVHDFH-SLHS-TVSSLCTSGKLEQANEF 961
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 81/348 (23%)
Query: 290 AERLMGF-MARVGVEPNVFTYNSLINAHCL--QDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
AE+ + +++ + P +SLI+ + D + + + D + G PS++T+ +
Sbjct: 80 AEKFINIHISKASIFPRTHMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCS 139
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLT-P-DICTWNALVGGFCKAGMPLAAKELISTMQK 404
LI+ + + +MD A+ +L M NK + P D +A++ GFCK G P A +
Sbjct: 140 LIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVD 199
Query: 405 HGQL-PDRITYAIILDGL----------------------FKCHFYPEAVSLY------- 434
G L P+ +TY ++ L F C FY + Y
Sbjct: 200 SGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALV 259
Query: 435 ------RELEKMNLDRHITIYSIMLD---------------------------------- 454
RE+ + ++R + YSI++D
Sbjct: 260 DALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAII 319
Query: 455 -GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCP 513
GLC G+L++A F+ + + G+++D F Y ++ G+CR+G L+ A +L DME++G
Sbjct: 320 RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Query: 514 PNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
P+ TYN + GL G +S +++ KG D T L++ +
Sbjct: 380 PSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSY 422
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 108/255 (42%), Gaps = 14/255 (5%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A+ F+ + I P+ + +LI+ + K + A L+ M S G+ + + +++
Sbjct: 709 ALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVD 768
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
C+L +T+ V+ + PD T+++++ G C +G++E+AL + +
Sbjct: 769 GYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISA 828
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKK--VEGRGFKFDVPVYTAIMDS---------LCK 221
+ + +I G C G A G ++ V K V + +S LC+
Sbjct: 829 DFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCE 888
Query: 222 DGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF--HCSRGKVLKKGIMPDVHTFSAIVD 279
G V +A+ + E++ I P R F + ++ KK + D H+ + V
Sbjct: 889 QGRVPQAIKILDEISST-IYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVS 947
Query: 280 NYCKEGMIARAERLM 294
+ C G + +A +
Sbjct: 948 SLCTSGKLEQANEFV 962
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 320 DQMQDAMKVYDSMIYKGCL-PSTVTYNTLIHGWCKIKKMDKAMSLL---GEMVNKGLTPD 375
++ +DA K + I K + P T ++LIHG+ I + D + LL + N G P
Sbjct: 75 NRYEDAEKFINIHISKASIFPRTHMLDSLIHGF-SITRDDPSKGLLILRDCLRNHGAFPS 133
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
T+ +L+ F + G A E++ M K YP
Sbjct: 134 SLTFCSLIYRFVEKGEMDNAIEVLEMMTN------------------KNVNYP------- 168
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI-DVFTYTIMVQGLCRE 494
D + S ++ G C G+ + A FF G+ + ++ TYT +V LC+
Sbjct: 169 ------FDNFVC--SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQL 220
Query: 495 GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTT 554
G +D+ L+ +E++G + Y+ ++ G + G + + + M KG + D +
Sbjct: 221 GKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSY 280
Query: 555 ELLINFFS 562
+LI+ S
Sbjct: 281 SILIDGLS 288
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 215/439 (48%), Gaps = 11/439 (2%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
L+ VD A++ F M +P + ++ L+ ++ A M+ + I+++ +T
Sbjct: 168 LRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYT 227
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
F I+IN LC+ + LG+M G++P IVT T+V G G +E A + M
Sbjct: 228 FNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMK 287
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
G++ + T+ I++ +C G S + K++ G D Y ++ +G +
Sbjct: 288 SKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSYNILIRGCSNNGDLE 344
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIV 278
A EM +G+ P TYN L GLF ++ ++ +KGI+ D T++ ++
Sbjct: 345 MAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILI 404
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+ YC+ G +A L M G++P FTY SLI C +++ ++A ++++ ++ KG
Sbjct: 405 NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMK 464
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P V NTL+ G C I MD+A SLL EM + PD T+N L+ G C G A+EL
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+ M++ G PD I+Y ++ G K A + E+ + + + Y+ +L GL
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK 584
Query: 459 YGRLKDAREFFSGLQAKGL 477
+ A E ++++G+
Sbjct: 585 NQEGELAEELLREMKSEGI 603
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/454 (27%), Positives = 217/454 (47%), Gaps = 9/454 (1%)
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
F +++ C C+L D LM + G P T I+ L +E A M
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
M + N YT +IN LCK G A G+ +E G K + Y ++ G +
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK---VLKK----GIMPDVHTFSAIVD 279
A + SEM KG QPD+ TYN + + C+ G+ VL++ G++PD +++ ++
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWM--CNEGRASEVLREMKEIGLVPDSVSYNILIR 335
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
G + A M + G+ P +TYN+LI+ ++++++ A + + KG +
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
+VTYN LI+G+C+ KA +L EM+ G+ P T+ +L+ C+ A EL
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
+ G PD + ++DG A SL +E++ M+++ Y+ ++ GLC
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
G+ ++ARE ++ +G+K D +Y ++ G ++G A + +M G P TY
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 520 NLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
N ++GL + + +E+ L+ MK +G + ++
Sbjct: 576 NALLKGLSKNQEGELAEELLREMKSEGIVPNDSS 609
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 219/463 (47%), Gaps = 11/463 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
F +L+ +++ AI M G + T ++ L RL+R + + M+
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+M ++ ++ T ++N LC EG +++A G M+ G + T+ ++ G G
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A +++ +GF+ D+ Y I+ +C +G +E L EM G+ PD V+YN L
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNILI 334
Query: 252 RG--------LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
RG + R +++K+G++P +T++ ++ E I AE L+ + G+
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
+ TYN LIN +C + A ++D M+ G P+ TY +LI+ C+ K +A L
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL 454
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
++V KG+ PD+ N L+ G C G A L+ M PD +TY ++ GL
Sbjct: 455 FEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCG 514
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
+ EA L E+++ + Y+ ++ G G K A + + G + T
Sbjct: 515 EGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLT 574
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
Y +++GL + + AE+LL +M+ +G PND ++ ++ +
Sbjct: 575 YNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/431 (26%), Positives = 203/431 (47%), Gaps = 15/431 (3%)
Query: 145 IVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG 204
+V C V++A+ M E G+ + T I+ L ++ A ++ +
Sbjct: 161 LVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME 220
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV-- 262
K +V + +++ LCK+G + +A G M GI+P +VTYN L +G RG++
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF--SLRGRIEG 278
Query: 263 --------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
KG PD+ T++ I+ C EG RA ++ M +G+ P+ +YN LI
Sbjct: 279 ARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIR 335
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP 374
++ A D M+ +G +P+ TYNTLIHG K++ A L+ E+ KG+
Sbjct: 336 GCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVL 395
Query: 375 DICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLY 434
D T+N L+ G+C+ G A L M G P + TY ++ L + + EA L+
Sbjct: 396 DSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
Query: 435 RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
++ + + + + ++DG C+ G + A + + D TY +++GLC E
Sbjct: 456 EKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGE 515
Query: 495 GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTT 554
G ++A +L+ +M+ +G P+ +YN + G ++GD + M GF+ T
Sbjct: 516 GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTY 575
Query: 555 ELLINFFSGNK 565
L+ S N+
Sbjct: 576 NALLKGLSKNQ 586
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 8/274 (2%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A + ++M P + LI+ + A L++ + GI DS T+ I
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+IN C+ F + M G++P T T+++ LC + +A L ++ G
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ + +++G C +GN A K+++ D Y +M LC +G EA
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFH--------CSRGKVLKKGIMPDVHTFSAIVDNY 281
L EM +GI+PD ++YN L G R ++L G P + T++A++
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
K AE L+ M G+ PN ++ S+I A
Sbjct: 583 SKNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 3/192 (1%)
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
T ++ LV C+ M A E M++ G P T IL L + + A
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
Y ++ +M + ++ ++IM++ LC G+LK A+ F ++ G+K + TY +VQG
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271
Query: 493 REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
G ++ A ++ +M+ KG P+ TYN + + G R+ + L+ MK G D+
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSV 328
Query: 553 TTELLINFFSGN 564
+ +LI S N
Sbjct: 329 SYNILIRGCSNN 340
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 106/229 (46%), Gaps = 4/229 (1%)
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
ST+ ++ L+ C+++ +D+A+ M KG P T N ++ + A
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
+ M + + T+ I+++ L K +A +E + I Y+ ++ G
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
GR++ AR S +++KG + D+ TY ++ +C EG A ++L +M+E G P+ +Y
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSY 330
Query: 520 NLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN-FFSGNKAD 567
N+ ++G GD+ + Y M +G T LI+ F NK +
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/167 (19%), Positives = 79/167 (47%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A + F K+ P++ L++ + + A SL+K M + I D T+ ++
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMR 510
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
LC + + ++G M + G++PD ++ T+++G +G+ + A + M +G+
Sbjct: 511 GLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
T+ A++ GL K A ++++ G + + ++++++
Sbjct: 571 TLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAM 617
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 234/492 (47%), Gaps = 8/492 (1%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN++ + VLI + K K + A + M G + D F+++ VIN L + + D +
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALEL 206
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM-DEMGYRCNSYTHGAIINGLC 185
M + G+ PD+ +++G E + + A+ L R+ ++ N TH +I+GL
Sbjct: 207 FDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLS 266
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
K G + +++++ + D+ Y++++ LC G V++A +++E+ + DVV
Sbjct: 267 KCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVV 326
Query: 246 TYNCLTRGLFHCSR-------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA 298
TYN + G C + ++++ ++ +++ ++ + G I A + M
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
G + TY I+ C+ + A+ V + G Y ++I CK K+++
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
+A +L+ EM G+ + NAL+GG + A + M K+G P ++Y I++
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILI 506
Query: 419 DGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLK 478
GL K + EA + +E+ + + YSI+L GLC ++ A E + GL+
Sbjct: 507 CGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLE 566
Query: 479 IDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKY 538
DV + I++ GLC G LDDA ++ +ME + C N TYN ++G + GD +R+
Sbjct: 567 TDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVI 626
Query: 539 LQLMKGKGFSAD 550
M G D
Sbjct: 627 WGYMYKMGLQPD 638
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 236/491 (48%), Gaps = 14/491 (2%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRM-HSLGIEADSFTFT 108
+D A++ F++M+ P++ + +LI+ +K K + TA+ L R+ + + T
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
I+I+ L + R D + M + E D+ T +++++GLC GNV++A + +DE
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDER 319
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
+ T+ ++ G C+ G ++ ++ +E + ++ Y ++ L ++G ++EA
Sbjct: 320 KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEA 378
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK-GIMP---------DVHTFSAIV 278
+W M KG D TY GL C G V K G+M DV+ +++I+
Sbjct: 379 TMIWRLMPAKGYAADKTTYGIFIHGL--CVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
D CK+ + A L+ M++ GVE N N+LI ++ +A M GC
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR 496
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+ V+YN LI G CK K +A + + EM+ G PD+ T++ L+ G C+ A EL
Sbjct: 497 PTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+ G D + + I++ GL +A+++ +E N ++ Y+ +++G
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
G A + + GL+ D+ +Y +++GLC + A + D G P T
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYT 676
Query: 519 YNLFVQGLLRR 529
+N+ V+ ++ R
Sbjct: 677 WNILVRAVVNR 687
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 226/519 (43%), Gaps = 46/519 (8%)
Query: 51 DAAVDFFNKMAAI-NPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
D A+D F +M I P I+ + L+N V+ K + SL + G+
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVA-------- 146
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
P++ T ++ C + E+A G M + G
Sbjct: 147 ---------------------------PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEG 179
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
++ + +++ +IN L K G A+ F ++ RG DV Y ++D K+ A+
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 230 GLWSEM-TGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDN 280
LW + + P+V T+N + GL C R ++ + D++T+S+++
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
C G + +AE + + +V TYN+++ C +++++++++ M +K + +
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-N 358
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
V+YN LI G + K+D+A + M KG D T+ + G C G A ++
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
++ G D YA I+D L K EA +L +E+ K ++ + + + ++ GL
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDS 478
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
RL +A F + G + V +Y I++ GLC+ G +A + +M E G P+ TY+
Sbjct: 479 RLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYS 538
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+ + GL R I + + G D +LI+
Sbjct: 539 ILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIH 577
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 131/540 (24%), Positives = 245/540 (45%), Gaps = 21/540 (3%)
Query: 35 PKRRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKR 94
P +LSS+ +D A + +NKM I + +L+ ++ + A+ + +R
Sbjct: 205 PYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRR 264
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF-KMGLEPDIVTLTTIVNGLCAEG 153
+ S G E D F++ + C+ + +L M K+G+ T T+++ EG
Sbjct: 265 VMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEG 324
Query: 154 NVEQALGLAMRMDEM---GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP 210
N+E+A+ + MDEM G + +++NG CK A+ F ++E G D
Sbjct: 325 NMEEAVRV---MDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKV 381
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPD 270
+++ +++ CK+ + +A+ + M I P V + + +G C + + + +
Sbjct: 382 MFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG---CLKAESPEAALEIF 438
Query: 271 VHTFSAIVDN----------YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
+F + + + +CK+G + A + M + G+EPNV YN+++ AHC
Sbjct: 439 NDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMK 498
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
M A ++ M+ KG P+ TY+ LI G+ K K A ++ +M + +N
Sbjct: 499 NMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYN 558
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRIT-YAIILDGLFKCHFYPEAVSLYRELEK 439
++ G CK G AKE++ + K + T Y I+DG K AV YRE+ +
Sbjct: 559 TIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSE 618
Query: 440 MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDD 499
++ ++ +++G C R+ A E +++ LK+D+ Y ++ G C++ +
Sbjct: 619 NGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKT 678
Query: 500 AEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
A L ++ E G PN YN + G G + + + M G S D T +I+
Sbjct: 679 AYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMID 738
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 147/599 (24%), Positives = 255/599 (42%), Gaps = 84/599 (14%)
Query: 42 SSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH-SLGI 100
+S+R+ K + AV F ++ + P+ F++ + K A+ L++ M LG+
Sbjct: 248 ASLRERKP-EEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGV 306
Query: 101 EADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALG 160
A T+T VI + + V+ M G+ ++ T++VNG C + +AL
Sbjct: 307 PASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALD 366
Query: 161 LAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEG-RGFKFDVPVYTAIMDSL 219
L RM+E G + ++ CK AI ++ +++ R V V+T I L
Sbjct: 367 LFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCL 426
Query: 220 ---------------------------------CKDGLVNEALGLWSEMTGKGIQPDVVT 246
CK G V+ A M KGI+P+VV
Sbjct: 427 KAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVF 486
Query: 247 YNCLTRGLFHCSR----------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
YN + L HC ++L+KG+ P+ T+S ++D + K A ++
Sbjct: 487 YNNMM--LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQ 544
Query: 297 MARVGVEPNVFTYNSLINAHC-----------LQDQMQD--------------------- 324
M E N YN++IN C LQ+ +++
Sbjct: 545 MNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVG 604
Query: 325 ----AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
A++ Y M G P+ VT+ +LI+G+CK +MD A+ + EM + L D+ +
Sbjct: 605 DTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYG 664
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
AL+ GFCK A L S + + G +P+ Y ++ G A+ LY+++
Sbjct: 665 ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND 724
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ + Y+ M+DGL G + A + +S L G+ D + ++V GL ++G A
Sbjct: 725 GISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKA 784
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
++L +M++K PN Y+ + G R G+++ + + M KG D T LL++
Sbjct: 785 SKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 196/414 (47%), Gaps = 28/414 (6%)
Query: 78 LVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEP 137
L K A S +K M GIE + + ++ CR+ DL + M + GLEP
Sbjct: 458 LFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 138 DIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYF 197
+ T + +++G + + A + +M+ + N + IINGLCKVG TS A
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 198 KK-VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH 256
+ ++ + + Y +I+D K G + A+ + EM+ G P+VVT
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVT---------- 627
Query: 257 CSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH 316
F+++++ +CK + A + M + ++ ++ Y +LI+
Sbjct: 628 -----------------FTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 317 CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
C ++ M+ A ++ + G +P+ YN+LI G+ + KMD A+ L +MVN G++ D+
Sbjct: 671 CKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDL 730
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
T+ ++ G K G A +L S + G +PD I + ++++GL K + +A + E
Sbjct: 731 FTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEE 790
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQG 490
++K ++ ++ +YS ++ G G L +A + KG+ D + ++V G
Sbjct: 791 MKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 140/559 (25%), Positives = 236/559 (42%), Gaps = 85/559 (15%)
Query: 53 AVDFFNKMAAINPFPNIKE-FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVI 111
A+D +M P +E +T +I VK + A+ ++ M GI T ++
Sbjct: 293 ALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLV 352
Query: 112 NCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYR 171
N C+ + + M + GL PD V + +V C +E+A+ MRM +
Sbjct: 353 NGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIA 412
Query: 172 CNSY------------------------------THGAIINGL----CKVGNTSAAIGYF 197
+S HG + N + CK G AA +
Sbjct: 413 PSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFL 472
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF-- 255
K +E +G + +V Y +M + C+ ++ A ++SEM KG++P+ TY+ L G F
Sbjct: 473 KMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Query: 256 ------------------------------------HCSRGKVLKKGIMPDVH------T 273
S+ K + + ++ + +
Sbjct: 533 KDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTS 592
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV---YD 330
+++I+D + K G A M+ G PNV T+ SLIN C ++M A+++
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
SM K LP+ Y LI G+CK M A +L E+ GL P++ +N+L+ GF G
Sbjct: 653 SMELKLDLPA---YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLG 709
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
AA +L M G D TY ++DGL K A LY EL + + ++
Sbjct: 710 KMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHM 769
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
++++GL G+ A + ++ K + +V Y+ ++ G REG L++A +L +M EK
Sbjct: 770 VLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEK 829
Query: 511 GCPPNDCTYNLFVQGLLRR 529
G +D +NL V G + +
Sbjct: 830 GIVHDDTVFNLLVSGRVEK 848
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 210/516 (40%), Gaps = 44/516 (8%)
Query: 90 SLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGL 149
+LV G E F ++N R R D GLM + P + + +++ L
Sbjct: 155 NLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSL 214
Query: 150 CAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDV 209
+++A + +M +G ++ T ++ + A+ F++V RG + D
Sbjct: 215 VRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDG 274
Query: 210 PVYTAIMDSLCKDGLVNEALGLWSEMTGK-GIQPDVVTYNCLTRGLFHCSR--------G 260
+++ + + CK + AL L EM GK G+ TY +
Sbjct: 275 LLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMD 334
Query: 261 KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
+++ GI V +++V+ YCK + +A L M G+ P+ ++ ++ C
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHG--------------------W--------- 351
+M+ A++ Y M PS+V +T+I G W
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNK 454
Query: 352 -----CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG 406
CK K+D A S L M KG+ P++ +N ++ C+ A+ + S M + G
Sbjct: 455 IFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKG 514
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
P+ TY+I++DG FK A + ++ N + + IY+ +++GLC G+ A+
Sbjct: 515 LEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAK 574
Query: 467 EFFSGL-QAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQG 525
E L + K + +Y ++ G + G D A + +M E G PN T+ + G
Sbjct: 575 EMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLING 634
Query: 526 LLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ + + + MK D LI+ F
Sbjct: 635 FCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 160/400 (40%), Gaps = 29/400 (7%)
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G+ ++N + A+ F + R VP ++ SL + L++EA
Sbjct: 164 GFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEA 223
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
++++M G+ D VT L R +E
Sbjct: 224 KEIYNKMVLIGVAGDNVTTQLLMRA---------------------------SLRERKPE 256
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP-STVTYNTL 347
A ++ + G EP+ ++ + A C + A+ + M K +P S TY ++
Sbjct: 257 EAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSV 316
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
I + K M++A+ ++ EMV G+ + +LV G+CK A +L + M++ G
Sbjct: 317 IVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGL 376
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
PD++ ++++++ K +A+ Y ++ + + + M+ G + A E
Sbjct: 377 APDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALE 436
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLL 527
F+ + I + C++G +D A L ME+KG PN YN +
Sbjct: 437 IFNDSFESWIAHGFMCNKIFLL-FCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHC 495
Query: 528 RRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKAD 567
R ++ + M KG + T +LI+ F NK +
Sbjct: 496 RMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 102/238 (42%), Gaps = 35/238 (14%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
D+AV+ + +M+ PN+ FT LIN K A+ + M S+ ++ D + +
Sbjct: 607 DSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGAL 666
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEP--------------------------------- 137
I+ C+ + + + + ++GL P
Sbjct: 667 IDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGI 726
Query: 138 --DIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG 195
D+ T TT+++GL +GN+ A L + ++G + H ++NGL K G A
Sbjct: 727 SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASK 786
Query: 196 YFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
++++ + +V +Y+ ++ ++G +NEA L EM KGI D +N L G
Sbjct: 787 MLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+S R+L +DAA+D + KM ++ +T +I+ ++K + A L + LG
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
I D +++N L + + +L M K + P+++ +T++ G EGN+ +A
Sbjct: 761 IVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAF 820
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG 204
L M E G + +++G + ++ I E R
Sbjct: 821 RLHDEMLEKGIVHDDTVFNLLVSGRVEKPPAASKISSLASPEMRS 865
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/467 (26%), Positives = 220/467 (47%), Gaps = 28/467 (5%)
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
A+ +V M + G+ S T V+ L + V M G+ PD + +V
Sbjct: 166 AVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVI 225
Query: 148 GLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF 207
G +G +++A M + G+ ++ T I+ LC+ G + AI YF+K+ GFK
Sbjct: 226 GCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKP 285
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGI 267
++ +T+++D LCK G + +A + EM ++ G
Sbjct: 286 NLINFTSLIDGLCKKGSIKQAFEMLEEM---------------------------VRNGW 318
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV-EPNVFTYNSLINAHCLQDQMQDAM 326
P+V+T +A++D CK G +A RL + R +PNV TY S+I +C +D++ A
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
++ M +G P+ TY TLI+G CK +A L+ M ++G P+I T+NA +
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 438
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
CK A EL++ G D +TY I++ K + +A++ + + K + +
Sbjct: 439 CKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADM 498
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
+ +I++ C ++K++ F + + GL TYT M+ C+EG +D A + +
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
M+ GC P+ TY + GL ++ + + K + M +G S T
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVT 605
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 184/376 (48%), Gaps = 13/376 (3%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
+L+++ + V+ A+ +F KM + PN+ FT LI+ + K A +++ M G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 100 IEADSFTFTIVINCLCRLSRTDLGF-CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
+ + +T T +I+ LC+ T+ F L L+ +P++ T T+++ G C E + +A
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L RM E G N T+ +ING CK G+ A + GF ++ Y A +DS
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIM 268
LCK EA L ++ G++ D VTY L + C + ++ K G
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQE--QCKQNDINQALAFFCRMNKTGFE 495
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
D+ + ++ +C++ + +ERL + +G+ P TY S+I+ +C + + A+K
Sbjct: 496 ADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKY 555
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+ +M GC+P + TY +LI G CK +D+A L M+++GL+P T L +CK
Sbjct: 556 FHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCK 615
Query: 389 AGMPLAAKELISTMQK 404
A L+ + K
Sbjct: 616 RNDSANAMILLEPLDK 631
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 202/461 (43%), Gaps = 65/461 (14%)
Query: 146 VNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGF 205
+ L A GN+++A + RC ++ ++G + A+G ++ +G
Sbjct: 134 ADSLLANGNLQKAHEVM--------RC-------MLRNFSEIGRLNEAVGMVMDMQNQGL 178
Query: 206 KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH--------- 256
+++ + GL+ A ++ EM+ +G+ PD +Y + G F
Sbjct: 179 TPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADR 238
Query: 257 ------------------------CSRG----------KVLKKGIMPDVHTFSAIVDNYC 282
C G K++ G P++ F++++D C
Sbjct: 239 WLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLC 298
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI----YKGCL 338
K+G I +A ++ M R G +PNV+T+ +LI+ C + + A +++ ++ YK
Sbjct: 299 KKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYK--- 355
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+ TY ++I G+CK K+++A L M +GL P++ T+ L+ G CKAG A EL
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYEL 415
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
++ M G +P+ TY +D L K PEA L + L+ Y+I++ C
Sbjct: 416 MNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCK 475
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
+ A FF + G + D+ I++ CR+ + ++E+L + G P T
Sbjct: 476 QNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKET 535
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
Y + + GDI + KY MK G D+ T LI+
Sbjct: 536 YTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLIS 576
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 114/432 (26%), Positives = 194/432 (44%), Gaps = 16/432 (3%)
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
AI ++M LG + + FT +I+ LC+ F +L M + G +P++ T T +++
Sbjct: 271 AIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALID 330
Query: 148 GLCAEGNVEQALGLAMRMDEMG-YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFK 206
GLC G E+A L +++ Y+ N +T+ ++I G CK + A F +++ +G
Sbjct: 331 GLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF 390
Query: 207 FDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG------ 260
+V YT +++ CK G A L + M +G P++ TYN L SR
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 261 --KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCL 318
K G+ D T++ ++ CK+ I +A M + G E ++ N LI A C
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
Q +M+++ +++ ++ G +P+ TY ++I +CK +D A+ M G PD T
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 570
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
+ +L+ G CK M A +L M G P +T + K + A+ L LE
Sbjct: 571 YGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMIL---LE 627
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
++ I ++ LCS ++ A FF L K D T G
Sbjct: 628 PLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG--- 684
Query: 499 DAEQLLMDMEEK 510
L+ D+ E+
Sbjct: 685 -KNNLVTDLTER 695
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 143/308 (46%), Gaps = 2/308 (0%)
Query: 254 LFHCSRGKVLKKGIMPDVH-TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
L+ + +L G + H ++ N+ + G + A ++ M G+ P+ T N +
Sbjct: 129 LYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCV 188
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
+ ++ A V+D M +G +P + +Y ++ G + K+ +A L M+ +G
Sbjct: 189 LEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGF 248
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
PD T ++ C+ G+ A M G P+ I + ++DGL K +A
Sbjct: 249 IPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFE 308
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDA-REFFSGLQAKGLKIDVFTYTIMVQGL 491
+ E+ + ++ ++ ++DGLC G + A R F +++ K +V TYT M+ G
Sbjct: 309 MLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGY 368
Query: 492 CREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADA 551
C+E L+ AE L M+E+G PN TY + G + G R+ + + LM +GF +
Sbjct: 369 CKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNI 428
Query: 552 TTTELLIN 559
T I+
Sbjct: 429 YTYNAAID 436
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 138/335 (41%), Gaps = 30/335 (8%)
Query: 56 FFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLC 115
F++M FPN+ +T LIN K + A L+ M G + +T+ I+ LC
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC 439
Query: 116 RLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSY 175
+ SR + +L F GLE D VT T ++ C + ++ QAL RM++ G+ +
Sbjct: 440 KKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMR 499
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
+ +I C+ + F+ V G YT+++ CK+G ++ AL + M
Sbjct: 500 LNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNM 559
Query: 236 TGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
G PD TY L GL CK+ M+ A +L
Sbjct: 560 KRHGCVPDSFTYGSLISGL---------------------------CKKSMVDEACKLYE 592
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
M G+ P T +L +C ++ +AM + + + K + T TL+ C K
Sbjct: 593 AMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLWIR---TVRTLVRKLCSEK 649
Query: 356 KMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
K+ A +++ K + D T A ++G
Sbjct: 650 KVGVAALFFQKLLEKDSSADRVTLAAFTTACSESG 684
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 9/245 (3%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A + N M PNI + I+ + K A L+ + S G+EAD T+TI+I
Sbjct: 412 AYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQ 471
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
C+ + + M K G E D+ ++ C + ++++ L + +G
Sbjct: 472 EQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIP 531
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
T+ ++I+ CK G+ A+ YF ++ G D Y +++ LCK +V+EA L+
Sbjct: 532 TKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLY 591
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPD-------VHTFSAIVDNYCKEG 285
M +G+ P VT +T +C R I+ + + T +V C E
Sbjct: 592 EAMIDRGLSPPEVTR--VTLAYEYCKRNDSANAMILLEPLDKKLWIRTVRTLVRKLCSEK 649
Query: 286 MIARA 290
+ A
Sbjct: 650 KVGVA 654
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
NL + + ML GRL +A +Q +GL T +++ GL++ A
Sbjct: 142 NLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYA 201
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
E + +M +G P+ +Y L V G R G I ++++L M +GF D T L++
Sbjct: 202 ENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTA 261
Query: 561 FSGN 564
N
Sbjct: 262 LCEN 265
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 3/202 (1%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A+ FF +M +++ +LI + K + L + + SLG+ T+T
Sbjct: 479 INQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTS 538
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I+C C+ DL M + G PD T ++++GLC + V++A L M + G
Sbjct: 539 MISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG 598
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
T + CK +++ A+ + ++ K + ++ LC + V A
Sbjct: 599 LSPPEVTRVTLAYEYCKRNDSANAMILLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAA 655
Query: 230 GLWSEMTGKGIQPDVVTYNCLT 251
+ ++ K D VT T
Sbjct: 656 LFFQKLLEKDSSADRVTLAAFT 677
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 230/499 (46%), Gaps = 11/499 (2%)
Query: 79 VVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPD 138
+VK A+ + M SF + I L R SR +L + M MG
Sbjct: 19 LVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLI 78
Query: 139 IVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
T + ++GLC + L M+ +G+ + + ++ LC+ A+ F
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 199 KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCS 258
+ RG + DV YT +++ L + G V +A+ +W+ M G+ PD L GL H
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 259 RGKVLKKGIMPDVHT---------FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
+ + + + ++ + ++A++ +CK G I +AE L +M+++G EP++ TY
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS-LLGEMV 368
N L+N + + ++ A V M+ G +YN L+ C++ DK + ++ EM
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME 318
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
+G D+ +++ L+ FC+A A L M++ G + + +TY ++ +
Sbjct: 319 PRGFC-DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
A L ++ ++ L Y+ +LD LC G + A F+ + + D +Y ++
Sbjct: 378 VAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLI 437
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
GLCR G + +A +L DM+ K C P++ T+ + GL+R +S + K M KGF+
Sbjct: 438 SGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFT 497
Query: 549 ADATTTELLINFFSGNKAD 567
D ++ LI AD
Sbjct: 498 LDRDVSDTLIKASCSMSAD 516
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 122/445 (27%), Positives = 208/445 (46%), Gaps = 36/445 (8%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
++ I+ + K+K + +L+ M +LG D + F + ++ LCR ++ M
Sbjct: 82 YSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMV 141
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ G EPD+V+ T ++NGL G V A+ + M G ++ A++ GLC
Sbjct: 142 QRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVD 201
Query: 192 AAIGYF-KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL 250
A ++++ K VY A++ CK G + +A L S M+ G +PD+VTYN L
Sbjct: 202 LAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVL 261
Query: 251 TRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
++ Y M+ RAE +M M R G++ + ++YN
Sbjct: 262 ---------------------------LNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYN 294
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLP----STVTYNTLIHGWCKIKKMDKAMSLLGE 366
L+ HC ++ K Y+ M+ K P V+Y+TLI +C+ KA L E
Sbjct: 295 QLLKRHC---RVSHPDKCYNFMV-KEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEE 350
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M KG+ ++ T+ +L+ F + G AK+L+ M + G PDRI Y ILD L K
Sbjct: 351 MRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGN 410
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+A ++ ++ + + Y+ ++ GLC GR+ +A + F ++ K D T+
Sbjct: 411 VDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKF 470
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKG 511
++ GL R L A ++ M +KG
Sbjct: 471 IIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 163/384 (42%), Gaps = 46/384 (11%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV--------- 262
Y + + +L K G+++ A+ ++ EM + YN L SR ++
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 263 --------------------LKK--------------GIMPDVHTFSAIVDNYCKEGMIA 288
+KK G +PD+ F+ +D C+E +
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
A + M + G EP+V +Y LIN ++ DA++++++MI G P L+
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 349 HGWCKIKKMDKAMSLLGEMVNKG-LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
G C +K+D A ++ E + + +NAL+ GFCKAG A+ L S M K G
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
PD +TY ++L+ + + A + E+ + + Y+ +L C
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 468 FF-SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
F ++ +G DV +Y+ +++ CR A +L +M +KG N TY ++
Sbjct: 312 FMVKEMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAF 370
Query: 527 LRRGDISRSEKYLQLMKGKGFSAD 550
LR G+ S ++K L M G S D
Sbjct: 371 LREGNSSVAKKLLDQMTELGLSPD 394
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 128/287 (44%), Gaps = 1/287 (0%)
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
+ + + N K GMI A ++ M F YN I + + + A +Y M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
G TY+ I G CK+KK D +LL +M G PDI +N + C+
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIM 452
A + M + G+ PD ++Y I+++GLF+ +AV ++ + + + + +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 453 LDGLCSYGRLKDAREFFS-GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
+ GLC ++ A E + +++ +K+ Y ++ G C+ G ++ AE L M + G
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
C P+ TYN+ + + R+E + M G DA + L+
Sbjct: 251 CEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 128/299 (42%), Gaps = 35/299 (11%)
Query: 60 MAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSR 119
M+ I P++ + VL+N A ++ M GI+ D++++ ++ CR+S
Sbjct: 246 MSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSH 305
Query: 120 TDLGFCVLGLMFKMGLEP----DIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSY 175
D + M K +EP D+V+ +T++ C N +A L M + G N
Sbjct: 306 PDKCY---NFMVK-EMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVV 361
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
T+ ++I + GN+S A ++ G D YT I+D LCK G V++A G++++M
Sbjct: 362 TYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDM 421
Query: 236 TGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
I PD ++YN L GL C+ G + A +L
Sbjct: 422 IEHEITPDAISYNSLISGL---------------------------CRSGRVTEAIKLFE 454
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
M P+ T+ +I ++ A KV+D M+ KG +TLI C +
Sbjct: 455 DMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASCSM 513
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 112/259 (43%), Gaps = 1/259 (0%)
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
Y S I + +A++V+D M + + YN I + + + A ++ +
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M G + T++ + G CK L+S M+ G +PD + + LD L + +
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
AV + + + + + Y+I+++GL G++ DA E ++ + G+ D
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 487 MVQGLCREGLLDDA-EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
+V GLC +D A E + +++ + YN + G + G I ++E M
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 546 GFSADATTTELLINFFSGN 564
G D T +L+N++ N
Sbjct: 250 GCEPDLVTYNVLLNYYYDN 268
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 240/482 (49%), Gaps = 24/482 (4%)
Query: 89 ISLV-KRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
+SL+ +M + G+ D F ++I+ C++ R L F + L+ + D VT T+++
Sbjct: 113 VSLIYSKMIACGVSPDVFALNVLIHSFCKVGR--LSFAI-SLLRNRVISIDTVTYNTVIS 169
Query: 148 GLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF 207
GLC G ++A M +MG ++ ++ +I+G CKVGN A ++ +
Sbjct: 170 GLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS----EL 225
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGI 267
++ +T ++ S + EA + +M G PDVVT++ + L C GKVL+ G+
Sbjct: 226 NLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRL--CKGGKVLEGGL 280
Query: 268 M----------PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC 317
+ P+ T++ +VD+ K + A L M G+ ++ Y L++
Sbjct: 281 LLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
+++A K + ++ +P+ VTY L+ G CK + A ++ +M+ K + P++
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVV 400
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
T+++++ G+ K GM A L+ M+ +P+ TY ++DGLFK A+ L +E+
Sbjct: 401 TYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEM 460
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLL 497
+ ++ + I +++ L GR+K+ + + +KG+ +D YT ++ + G
Sbjct: 461 RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDE 520
Query: 498 DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
+ A +M+E+G P + +YN+ + G+L+ G + Y + M+ KG D T ++
Sbjct: 521 EAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAY-KGMREKGIEPDIATFNIM 579
Query: 558 IN 559
+N
Sbjct: 580 MN 581
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 240/506 (47%), Gaps = 11/506 (2%)
Query: 57 FNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCR 116
F + N PN+ +T L++ + K ++A ++ +M + + T++ +IN +
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 117 LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
+ +L M + P+ T T+++GL G E A+ L+ M +G N+Y
Sbjct: 412 KGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYI 471
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
A++N L ++G G K + +G D YT+++D K G AL EM
Sbjct: 472 LDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQ 531
Query: 237 GKGIQPDVVTYNCLTRGLFHCSRGKV---------LKKGIMPDVHTFSAIVDNYCKEGMI 287
+G+ DVV+YN L G+ GKV +KGI PD+ TF+ ++++ K+G
Sbjct: 532 ERGMPWDVVSYNVLISGMLKF--GKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDS 589
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
+L M G++P++ + N ++ C +M++A+ + + M+ P+ TY
Sbjct: 590 EGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
+ K K+ D +++ G+ +N L+ CK GM A ++ M+ G
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
+PD +T+ ++ G F +A+S Y + + + ++ Y+ ++ GL G +K+ +
Sbjct: 710 IPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDK 769
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLL 527
+ S ++++G++ D FTY ++ G + G + + + +M G P TYN+ +
Sbjct: 770 WLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 829
Query: 528 RRGDISRSEKYLQLMKGKGFSADATT 553
G + ++ + L+ M +G S + +T
Sbjct: 830 NVGKMLQARELLKEMGKRGVSPNTST 855
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 206/472 (43%), Gaps = 44/472 (9%)
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM-RMDEMGYRCNSYTHGAIINGLC 185
L M G+ PD ++++ G V + L +M G + + +I+ C
Sbjct: 81 LSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFC 140
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
KVG S AI + R D Y ++ LC+ GL +EA SEM GI PD V
Sbjct: 141 KVGRLSFAISLLR---NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTV 197
Query: 246 TYNCLTRGLFHCSRGKVLK--------------------------------------KGI 267
+YN L G C G ++ G
Sbjct: 198 SYNTLIDGF--CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGF 255
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
PDV TFS+I++ CK G + L+ M + V PN TY +L+++ + + A+
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+Y M+ +G V Y L+ G K + +A ++ P++ T+ ALV G C
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
KAG +A+ +I+ M + +P+ +TY+ +++G K EAVSL R++E N+ +
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 448 IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
Y ++DGL G+ + A E ++ G++ + + +V L R G + + + L+ DM
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDM 495
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
KG + Y + + GD + + + M+ +G D + +LI+
Sbjct: 496 VSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 547
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/510 (24%), Positives = 232/510 (45%), Gaps = 14/510 (2%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+ +A +M + PN+ ++ +IN VK A+SL+++M + + FT+
Sbjct: 380 LSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGT 439
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
VI+ L + + ++ + M +G+E + L +VN L G +++ GL M G
Sbjct: 440 VIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ + ++I+ K G+ AA+ + ++++ RG +DV Y ++ + K G V A
Sbjct: 500 VTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG-AD 558
Query: 230 GLWSEMTGKGIQPDVVTYNCL---------TRGLFHCSRGKVLKKGIMPDVHTFSAIVDN 280
+ M KGI+PD+ T+N + + G+ K+ GI P + + + +V
Sbjct: 559 WAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL-WDKMKSCGIKPSLMSCNIVVGM 617
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
C+ G + A ++ M + + PN+ TY ++ + K +++++ G S
Sbjct: 618 LCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLS 677
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
YNTLI CK+ KA ++G+M +G PD T+N+L+ G+ A S
Sbjct: 678 RQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYS 737
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M + G P+ TY I+ GL E E++ + Y+ ++ G G
Sbjct: 738 VMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
+K + + + A GL TY +++ G + A +LL +M ++G PN TY
Sbjct: 798 NMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYC 857
Query: 521 LFVQGLLR---RGDISRSEKYLQLMKGKGF 547
+ GL + D+ ++K + L + KG
Sbjct: 858 TMISGLCKLCTHPDVEWNKKAMYLAEAKGL 887
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 137/359 (38%), Gaps = 67/359 (18%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A+ N+M + PN+ + + ++ K K + + S GI+ +
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNT 683
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I LC+L T V+G M G PD VT ++++G +V +AL M E G
Sbjct: 684 LIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAG 743
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
N T+ II G L GL+ E
Sbjct: 744 ISPNVATYNTIIRG-----------------------------------LSDAGLIKEVD 768
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDVHTFSAIVDNY 281
SEM +G++PD TYN L G K ++ G++P T++ ++ +
Sbjct: 769 KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
G + +A L+ M + GV PN TY ++I+ C K C
Sbjct: 829 ANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLC-----------------KLCTHPD 871
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMV-NKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
V +N K + +A LL EMV KG P T + F K GM + A+ +
Sbjct: 872 VEWNK------KAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFL 924
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 232/487 (47%), Gaps = 9/487 (1%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
+L+ +R + VD A+ F +M + PN+ + +LI+++ + TA L M G
Sbjct: 349 ILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ + T I+++ LC+ + D + M PD +T ++++GL G V+ A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ +M + R NS + ++I G +K + + D+ + MD +
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCM 527
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDV 271
K G + ++ E+ + PD +Y+ L GL + ++G + D
Sbjct: 528 FKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDT 587
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
++ ++D +CK G + +A +L+ M G EP V TY S+I+ D++ +A +++
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
K + V Y++LI G+ K+ ++D+A +L E++ KGLTP++ TWN+L+ KA
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
A +M++ P+++TY I+++GL K + +A ++E++K + Y+
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
M+ GL G + +A F +A G D Y M++GL DA L + +G
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Query: 512 CPPNDCT 518
P ++ T
Sbjct: 828 LPIHNKT 834
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 139/565 (24%), Positives = 253/565 (44%), Gaps = 48/565 (8%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ + + D + F +M + P + FT LI K +A+SL+ M S
Sbjct: 174 LIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
++AD + + I+ ++ + D+ + + GL+PD VT T+++ LC +++A+
Sbjct: 234 LDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAV 293
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ +++ +Y + +I G G A ++ +G V Y I+ L
Sbjct: 294 EMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCL 353
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMP 269
K G V+EAL ++ EM K P++ TYN L L C GK+ K G+ P
Sbjct: 354 RKMGKVDEALKVFEEMK-KDAAPNLSTYNILIDML--CRAGKLDTAFELRDSMQKAGLFP 410
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+V T + +VD CK + A + M P+ T+ SLI+ ++ DA KVY
Sbjct: 411 NVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVY 470
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI--------CTWNA 381
+ M+ C +++ Y +LI + + + + +M+N+ +PD+ C + A
Sbjct: 471 EKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKA 530
Query: 382 ---------------------------LVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
L+ G KAG EL +M++ G + D Y
Sbjct: 531 GEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAY 590
Query: 415 AIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
I++DG KC +A L E++ + + Y ++DGL RL +A F ++
Sbjct: 591 NIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 650
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
K ++++V Y+ ++ G + G +D+A +L ++ +KG PN T+N + L++ +I+
Sbjct: 651 KRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 535 SEKYLQLMKGKGFSADATTTELLIN 559
+ Q MK + + T +LIN
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILIN 735
Score = 183 bits (465), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 231/524 (44%), Gaps = 13/524 (2%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LL M + DA +M+ P++ ++ VK +V+ M
Sbjct: 104 LLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFK 163
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+T +I ++ +D+ + M ++G EP + TT++ G EG V+ AL
Sbjct: 164 FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSAL 223
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M + + I+ KVG A +F ++E G K D YT+++ L
Sbjct: 224 SLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVL 283
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIMP 269
CK ++EA+ ++ + P YN + G + S GK + KG +P
Sbjct: 284 CKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMG--YGSAGKFDEAYSLLERQRAKGSIP 341
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
V ++ I+ K G + A ++ M + PN+ TYN LI+ C ++ A ++
Sbjct: 342 SVIAYNCILTCLRKMGKVDEALKVFEEMKK-DAAPNLSTYNILIDMLCRAGKLDTAFELR 400
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
DSM G P+ T N ++ CK +K+D+A ++ EM K TPD T+ +L+ G K
Sbjct: 401 DSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKV 460
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
G A ++ M + I Y ++ F + +Y+++ N + +
Sbjct: 461 GRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
+ +D + G + R F ++A+ D +Y+I++ GL + G ++ +L M+E
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKE 580
Query: 510 KGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
+GC + YN+ + G + G ++++ + L+ MK KGF T
Sbjct: 581 QGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/484 (24%), Positives = 224/484 (46%), Gaps = 9/484 (1%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
D A + A P++ + ++ + KM A+ + + M S T+ I+
Sbjct: 325 DEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLS-TYNIL 383
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
I+ LCR + D F + M K GL P++ T+ +V+ LC +++A + MD
Sbjct: 384 IDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVC 443
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
+ T ++I+GL KVG A ++K+ + + VYT+++ + G +
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHK 503
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHC---SRGKVLKKGI-----MPDVHTFSAIVDNYC 282
++ +M + PD+ N +F +G+ + + I +PD ++S ++
Sbjct: 504 IYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLI 563
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
K G L M G + YN +I+ C ++ A ++ + M KG P+ V
Sbjct: 564 KAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
TY ++I G KI ++D+A L E +K + ++ +++L+ GF K G A ++ +
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEEL 683
Query: 403 QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
+ G P+ T+ +LD L K EA+ ++ ++++ + Y I+++GLC +
Sbjct: 684 MQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKF 743
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLF 522
A F+ +Q +G+K +YT M+ GL + G + +A L + G P+ YN
Sbjct: 744 NKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 523 VQGL 526
++GL
Sbjct: 804 IEGL 807
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 194/417 (46%), Gaps = 8/417 (1%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ +D A F +M P+ F LI+ + K+ A + ++M +S +
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
T +I R + G + M PD+ L T ++ + G E+ + +
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
+ ++ ++ +I+GL K G + F ++ +G D Y ++D CK G VN+
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVD 279
A L EM KG +P VVTY + GL R + K I +V +S+++D
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLID 665
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
+ K G I A ++ + + G+ PN++T+NSL++A +++ +A+ + SM C P
Sbjct: 666 GFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP 725
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
+ VTY LI+G CK++K +KA EM +G+ P ++ ++ G KAG A L
Sbjct: 726 NQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALF 785
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
+ +G +PD Y +++GL + +A SL+ E + L H ++LD L
Sbjct: 786 DRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 173/414 (41%), Gaps = 8/414 (1%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ + + VD A + KM + N +T LI + K M +
Sbjct: 453 LIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
D ++C+ + + G + + PD + + +++GL G +
Sbjct: 513 CSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETY 572
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M E G ++ + +I+G CK G + A ++++ +GF+ V Y +++D L
Sbjct: 573 ELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGL 632
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDV 271
K ++EA L+ E K I+ +VV Y+ L G R ++++KG+ P++
Sbjct: 633 AKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
+T+++++D K I A M + PN TY LIN C + A +
Sbjct: 693 YTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQE 752
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
M +G PST++Y T+I G K + +A +L G PD +NA++ G
Sbjct: 753 MQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNR 812
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
+ A L ++ G T ++LD L K +A + L + RH
Sbjct: 813 AMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRETGKARH 866
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 117/281 (41%), Gaps = 2/281 (0%)
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
++++G M+ G P+V T ++ +++++ V M P+ Y TLI
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
+ + D ++L +M G P + + L+ GF K G +A L+ M+ D
Sbjct: 178 FSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDAD 237
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
+ Y + +D K A + E+E L Y+ M+ LC RL +A E F
Sbjct: 238 IVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFE 297
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
L+ + Y M+ G G D+A LL KG P+ YN + L + G
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 531 DISRSEKYLQLMKGKGFSADATTTELLINFF-SGNKADNTF 570
+ + K + MK K + + +T +LI+ K D F
Sbjct: 358 KVDEALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAF 397
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 94/239 (39%), Gaps = 35/239 (14%)
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT------------------------ 378
+YN+L+ + + D +LGEM G P + T
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 379 -----------WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
+ L+G F L MQ+ G P + ++ G K
Sbjct: 160 RKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRV 219
Query: 428 PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIM 487
A+SL E++ +LD I +Y++ +D G++ A +FF ++A GLK D TYT M
Sbjct: 220 DSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSM 279
Query: 488 VQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
+ LC+ LD+A ++ +E+ P YN + G G + L+ + KG
Sbjct: 280 IGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/501 (25%), Positives = 232/501 (46%), Gaps = 26/501 (5%)
Query: 57 FNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCR 116
F KM P+++ +++ ++ + A ++ + M GI TF +++ +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 117 ---LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCN 173
L R D + M + +E VT ++NG G +E+A M G+
Sbjct: 251 AGDLERVD---KIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT 307
Query: 174 SYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWS 233
Y+ +I G CK G A G ++ G Y + +LC G +++A L S
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLS 367
Query: 234 EMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM----------PDVHTFSAIVDNYCK 283
M PDVV+YN L G + GK ++ ++ P + T++ ++D C+
Sbjct: 368 SMAA----PDVVSYNTLMHG--YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 421
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
G + A+RL M + P+V TY +L+ + A +VYD M+ KG P
Sbjct: 422 SGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA 481
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMV-NKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
Y T G ++ DKA L EMV PD+ +N + G CK G + A E +
Sbjct: 482 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541
Query: 403 QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
+ G +PD +TY ++ G + + A +LY E+ + L + Y +++ G GRL
Sbjct: 542 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 601
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLF 522
+ A ++ + ++ +G++ +V T+ ++ G+C+ G +D+A + L MEE+G PPN +Y +
Sbjct: 602 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661
Query: 523 VQGLLRRGDISRSEKYLQLMK 543
+ + D + E+ ++L K
Sbjct: 662 IS---KNCDFEKWEEVVKLYK 679
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/442 (25%), Positives = 201/442 (45%), Gaps = 9/442 (2%)
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
V M + G+ P ++T T+++ G++E+ + + M + T+ +ING
Sbjct: 224 AVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGF 283
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
K G A + + GF + +++ CK GL ++A G+ EM GI P
Sbjct: 284 SKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTT 343
Query: 245 VTYNCLTRGLFHCSRGKV------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA 298
TYN L C G++ L PDV +++ ++ Y K G A L +
Sbjct: 344 STYNIYICAL--CDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLR 401
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
+ P++ TYN+LI+ C ++ A ++ + M + P +TY TL+ G+ K +
Sbjct: 402 AGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLS 461
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM-QKHGQLPDRITYAII 417
A + EM+ KG+ PD + G + G A L M PD Y +
Sbjct: 462 MATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVR 521
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
+DGL K +A+ R++ ++ L Y+ ++ G G+ K AR + + K L
Sbjct: 522 IDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRL 581
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
V TY +++ G + G L+ A Q +M+++G PN T+N + G+ + G+I + +
Sbjct: 582 YPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYR 641
Query: 538 YLQLMKGKGFSADATTTELLIN 559
YL M+ +G + + +LI+
Sbjct: 642 YLCKMEEEGIPPNKYSYTMLIS 663
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 181/396 (45%), Gaps = 25/396 (6%)
Query: 62 AINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTD 121
A+ P+ F LI K + A + M + GI + T+ I I LC R D
Sbjct: 305 AVTPY----SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRID 360
Query: 122 LGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAII 181
+L M PD+V+ T+++G G +A L + + T+ +I
Sbjct: 361 DARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLI 416
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
+GLC+ GN A +++ + DV YT ++ K+G ++ A ++ EM KGI+
Sbjct: 417 DGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIK 476
Query: 242 PDVVTYNCLTRG---------LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAER 292
PD Y G F V PD+ ++ +D CK G + +A
Sbjct: 477 PDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE 536
Query: 293 LMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWC 352
+ RVG+ P+ TY ++I + Q + A +YD M+ K PS +TY LI+G
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHA 596
Query: 353 KIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRI 412
K ++++A EM +G+ P++ T NAL+ G CKAG A + M++ G P++
Sbjct: 597 KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 413 TYAIILDGLFKCHF--YPEAVSLYRELEKMNLDRHI 446
+Y +++ C F + E V LY+E+ LD+ I
Sbjct: 657 SYTMLISK--NCDFEKWEEVVKLYKEM----LDKEI 686
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/512 (22%), Positives = 216/512 (42%), Gaps = 18/512 (3%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
+L +RD + ++ A + M P + F +++ K + M
Sbjct: 209 VLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRN 268
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
IE T+ I+IN + + + G M + G + ++ G C +G + A
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAW 328
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
G+ M G + T+ I LC G A + DV Y +M
Sbjct: 329 GVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP----DVVSYNTLMHGY 384
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV-----LKKG-----IMP 269
K G EA L+ ++ I P +VTYN L GL C G + LK+ I P
Sbjct: 385 IKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL--CESGNLEGAQRLKEEMTTQLIFP 442
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
DV T++ +V + K G ++ A + M R G++P+ + Y + A +++
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLH 502
Query: 330 DSMIYKGC-LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+ M+ P YN I G CK+ + KA+ ++ GL PD T+ ++ G+ +
Sbjct: 503 EEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLE 562
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G A+ L M + P ITY +++ G K +A E++K + ++
Sbjct: 563 NGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMT 622
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
++ +L G+C G + +A + ++ +G+ + ++YT+++ C ++ +L +M
Sbjct: 623 HNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEML 682
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
+K P+ T+ + L + + SR ++L+
Sbjct: 683 DKEIEPDGYTHRALFKHLEKDHE-SREVEFLE 713
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 141/316 (44%), Gaps = 39/316 (12%)
Query: 255 FHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
F S K+++KG +P V + ++ M+ +A + M G+ P V T+N++++
Sbjct: 187 FLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLD 246
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG--------- 365
+ ++ K++ M + S VTYN LI+G+ K KM++A G
Sbjct: 247 SCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAV 306
Query: 366 --------------------------EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
EM+N G+ P T+N + C G A+EL+
Sbjct: 307 TPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELL 366
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
S+M PD ++Y ++ G K + EA L+ +L ++ I Y+ ++DGLC
Sbjct: 367 SSMAA----PDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
G L+ A+ + + + DV TYT +V+G + G L A ++ +M KG P+ Y
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 520 NLFVQGLLRRGDISRS 535
G LR GD ++
Sbjct: 483 TTRAVGELRLGDSDKA 498
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 131/287 (45%), Gaps = 10/287 (3%)
Query: 281 YCKEGMIARAER-LMGF--MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
Y K+ M AE+ L+ F M R G P+V N ++ M A VY++MI G
Sbjct: 178 YTKKSM---AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGI 234
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
+P+ +T+NT++ K +++ + EM + + T+N L+ GF K G A+
Sbjct: 235 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
M++ G ++ +++G K + +A + E+ + + Y+I + LC
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC 517
+GR+ DARE S + A DV +Y ++ G + G +A L D+ P+
Sbjct: 355 DFGRIDDARELLSSMAAP----DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIV 410
Query: 518 TYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
TYN + GL G++ +++ + M + D T L+ F N
Sbjct: 411 TYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKN 457
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Query: 351 WCKIKK--MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
W KK +K + +M+ KG P + N ++ + M A + TM +HG +
Sbjct: 176 WVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIM 235
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
P IT+ +LD FK ++ E+++ N++ Y+I+++G G++++AR F
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRF 295
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLR 528
++ G + +++ +++G C++GL DDA + +M G P TYN+++ L
Sbjct: 296 HGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD 355
Query: 529 RGDISRSEKYLQLM 542
G I + + L M
Sbjct: 356 FGRIDDARELLSSM 369
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 161/636 (25%), Positives = 275/636 (43%), Gaps = 122/636 (19%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS-LGIEADSFTFTIVI 111
A+ +++M + P++ ++++N + + A+ K S LG+E + T+ +I
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 112 NCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA------------- 158
N + + VL LM + G+ ++VT T+++ G C +G +E+A
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 159 -----LGLAM-----------------RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY 196
G+ M M E+G R N+ ++ING CK G A
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL-- 254
F ++ K D Y ++D C+ G V+EAL L +M K + P V+TYN L +G
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 255 ---FH---------CSRG-----------------------------KVLKKGIMPDVHT 273
FH RG VL +G++ D T
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTIT 508
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
+ ++ CK + A+ ++ + +P V TY +L + + +++A V + M
Sbjct: 509 LNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYME 568
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
KG P+ YNTLI G K + ++K L+ E+ +GLTP + T+ AL+ G+C GM
Sbjct: 569 RKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMID 628
Query: 394 AAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL---------------- 437
A M + G + + I + LF+ EA L +++
Sbjct: 629 KAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEF 688
Query: 438 -----------------------EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
+K+ + +I +Y++ + GLC G+L+DAR+ FS L +
Sbjct: 689 LEASATTCLKTQKIAESVENSTPKKLLVPNNI-VYNVAIAGLCKAGKLEDARKLFSDLLS 747
Query: 475 KGLKI-DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDIS 533
I D +TYTI++ G G ++ A L +M KG PN TYN ++GL + G++
Sbjct: 748 SDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVD 807
Query: 534 RSEKYLQLMKGKGFSADATTTELLINFF--SGNKAD 567
R+++ L + KG + +A T LI+ SGN A+
Sbjct: 808 RAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAE 843
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 217/477 (45%), Gaps = 13/477 (2%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V A+ F+ M P++ L++ +V+ A+ + +M S + D FT +I
Sbjct: 171 VKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSI 230
Query: 110 VINCLCRLSRTDLGFCVLG-LMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
V+N CR D +GLE ++VT +++NG G+VE + M E
Sbjct: 231 VVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSER 290
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G N T+ ++I G CK G A F+ ++ + D +Y +MD C+ G + +A
Sbjct: 291 GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDA 350
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK----------GIMPDVHTFSAIV 278
+ + M G++ + N L G +C G++++ + PD HT++ +V
Sbjct: 351 VRVHDNMIEIGVRTNTTICNSLING--YCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLV 408
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
D YC+ G + A +L M + V P V TYN L+ + D + ++ M+ +G
Sbjct: 409 DGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
++ +TL+ K+ ++AM L ++ +GL D T N ++ G CK AKE+
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+ + P TY + G +K EA ++ +E+ + I +Y+ ++ G
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
Y L + L+A+GL V TY ++ G C G++D A +M EKG N
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLN 645
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 239/527 (45%), Gaps = 55/527 (10%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+ VL++ + A+ + M +G+ ++ +IN C+ + + M
Sbjct: 334 YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMN 393
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
L+PD T T+V+G C G V++AL L +M + T+ ++ G ++G
Sbjct: 394 DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFH 453
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
+ +K + RG D + ++++L K G NEA+ LW + +G+ D +T N +
Sbjct: 454 DVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMI 513
Query: 252 RGLFHCSRGKVLK-KGIM---------PDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
GL C KV + K I+ P V T+ A+ Y K G + A + +M R G
Sbjct: 514 SGL--CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
+ P + YN+LI+ + + + +G P+ TY LI GWC I +DKA
Sbjct: 572 IFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAY 631
Query: 362 SLLGEMVNKGLT--PDICT------------------------WNALVGGF--------C 387
+ EM+ KG+T +IC+ ++ L+ G+
Sbjct: 632 ATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEA 691
Query: 388 KAGMPLAAKELISTMQ----KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
A L +++ +++ K +P+ I Y + + GL K +A L+ +L ++ D
Sbjct: 692 SATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDL--LSSD 749
Query: 444 RHIT---IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
R I Y+I++ G G + A + KG+ ++ TY +++GLC+ G +D A
Sbjct: 750 RFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRA 809
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
++LL + +KG PN TYN + GL++ G+++ + + + M KG
Sbjct: 810 QRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 196/447 (43%), Gaps = 57/447 (12%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
VD A+ ++M P + + +L+ ++ + +SL K M G+ AD + +
Sbjct: 417 VDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCST 476
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
++ L +L + + + GL D +TL +++GLC V +A + +D +
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI---LDNVN 533
Query: 170 -YRCNS--YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
+RC T+ A+ +G KVGN A + +E +G + +Y ++ K +N
Sbjct: 534 IFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLN 593
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSA 276
+ L E+ +G+ P V TY L G C+ G ++++KGI +V+ S
Sbjct: 594 KVADLVIELRARGLTPTVATYGALITGW--CNIGMIDKAYATCFEMIEKGITLNVNICSK 651
Query: 277 I---------VDNYC-------------------KEGMIARA----------ERLMGFMA 298
I +D C KE + A A E +
Sbjct: 652 IANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTP 711
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG-CLPSTVTYNTLIHGWCKIKKM 357
+ + PN YN I C +++DA K++ ++ +P TY LIHG +
Sbjct: 712 KKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDI 771
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
+KA +L EM KG+ P+I T+NAL+ G CK G A+ L+ + + G P+ ITY +
Sbjct: 772 NKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTL 831
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDR 444
+DGL K EA+ L ++ + L R
Sbjct: 832 IDGLVKSGNVAEAMRLKEKMIEKGLVR 858
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 134/291 (46%), Gaps = 1/291 (0%)
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
F I+ Y ++G++ A + M G P++ + NSL++ + + A+ VYD M
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGM 391
I P T + +++ +C+ +DKAM E + GL ++ T+N+L+ G+ G
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
++ M + G + +TY ++ G K EA ++ L++ L +Y +
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
++DG C G+++DA + G++ + ++ G C+ G L +AEQ+ M +
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
P+ TYN V G R G + + K M K T +L+ +S
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYS 447
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 137/498 (27%), Positives = 233/498 (46%), Gaps = 28/498 (5%)
Query: 89 ISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNG 148
I+L+ R S G+ +S T I+ LC+ +R + + +L + K + +++
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 149 LCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG---- 204
L ++ + L ++MDE+ R + T G +IN LCK A+ F+K+ G+
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDG 363
Query: 205 --FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT-GKGIQPDVVTYNCLTRGLFHCSRGK 261
K D + ++D LCK G + EA L M + P+ VTYNCL G +C GK
Sbjct: 364 NVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDG--YCRAGK 421
Query: 262 V----------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
+ + I P+V T + IV C+ + A M + GV+ NV TY +
Sbjct: 422 LETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMT 481
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
LI+A C ++ AM Y+ M+ GC P Y LI G C++++ A+ ++ ++ G
Sbjct: 482 LIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG 541
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV 431
+ D+ +N L+G FC E+++ M+K G+ PD ITY ++ K +
Sbjct: 542 FSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVE 601
Query: 432 SLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS--GLQAKGLKIDVFTYTIMVQ 489
+ ++ + LD +T Y ++D CS G L +A + F GL +K + + Y I++
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNILIN 660
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK---GKG 546
+ G A L +M+ K PN TYN + L + ++ E L+LM +
Sbjct: 661 AFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCL---NEKTQGETLLKLMDEMVEQS 717
Query: 547 FSADATTTELLINFFSGN 564
+ T E+L+ SG+
Sbjct: 718 CEPNQITMEILMERLSGS 735
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/420 (25%), Positives = 197/420 (46%), Gaps = 55/420 (13%)
Query: 55 DFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG------IEADSFTFT 108
D KM + P++ +LIN + K + A+ + ++M I+ADS F
Sbjct: 315 DLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFN 374
Query: 109 IVINCLCRLSRTDL--------------------------GFC----------VLGLMFK 132
+I+ LC++ R G+C V+ M +
Sbjct: 375 TLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKE 434
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
++P++VT+ TIV G+C + A+ M M++ G + N T+ +I+ C V N
Sbjct: 435 DEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEK 494
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
A+ +++K+ G D +Y A++ LC+ ++A+ + ++ G D++ YN L
Sbjct: 495 AMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLI- 553
Query: 253 GLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV 302
GLF C + + K+G PD T++ ++ + K ER+M M G+
Sbjct: 554 GLF-CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGL 612
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSM-IYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
+P V TY ++I+A+C ++ +A+K++ M ++ P+TV YN LI+ + K+ +A+
Sbjct: 613 DPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQAL 672
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL 421
SL EM K + P++ T+NAL + +L+ M + P++IT I+++ L
Sbjct: 673 SLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILMERL 732
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/446 (23%), Positives = 199/446 (44%), Gaps = 21/446 (4%)
Query: 139 IVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
+V ++ G V Q++ + R+D NS +++ L + G A
Sbjct: 152 VVATNLLIRWFGRMGMVNQSVLVYERLD--SNMKNSQVRNVVVDVLLRNGLVDDAFKVLD 209
Query: 199 KVEGRGFKFDVPVYTA--IMDSLCKDGLVNEA--LGLWSEMTGKGIQPDVVTYNCLTRGL 254
++ + F TA ++ + K L+ E + L S + G+ P+ V L
Sbjct: 210 EMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 255 FHCSRGKV-------LKKGIMP-DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
+R L K P + F+A++ + I+R L+ M V + P+V
Sbjct: 270 CKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDV 329
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGC------LPSTVTYNTLIHGWCKIKKMDKA 360
T LIN C ++ +A++V++ M K ++ +NTLI G CK+ ++ +A
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 361 MSLLGEM-VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD 419
LL M + + P+ T+N L+ G+C+AG AKE++S M++ P+ +T I+
Sbjct: 390 EELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG 449
Query: 420 GLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI 479
G+ + H AV + ++EK + ++ Y ++ CS ++ A ++ + G
Sbjct: 450 GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP 509
Query: 480 DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYL 539
D Y ++ GLC+ DA +++ ++E G + YN+ + + + + + L
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEML 569
Query: 540 QLMKGKGFSADATTTELLINFFSGNK 565
M+ +G D+ T LI+FF +K
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHK 595
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 119/254 (46%), Gaps = 13/254 (5%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
+ V+ A+ ++ KM P+ K + LI+ + +++ AI +V+++ G D
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+ ++I C + T+ + +L M K G +PD +T T+++ + E + +M
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF--DVPVYTAIMDSLCKDGL 224
E G T+GA+I+ C VG A+ FK + G K + +Y ++++ K G
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-GLHSKVNPNTVIYNILINAFSKLGN 667
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKE 284
+AL L EM K ++P+V TYN L + L ++G+ L K +V+ C+
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK-------LMDEMVEQSCEP 720
Query: 285 GMIARA---ERLMG 295
I ERL G
Sbjct: 721 NQITMEILMERLSG 734
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 126/486 (25%), Positives = 230/486 (47%), Gaps = 12/486 (2%)
Query: 68 NIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVL 127
N + LI+L++K + T A+ + +RM G T++ ++ L + D +L
Sbjct: 187 NAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLL 246
Query: 128 GLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKV 187
M +GL+P++ T T + L G + +A + RMD+ G + T+ +I+ LC
Sbjct: 247 KEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTA 306
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
A F+K++ K D Y ++D + ++ WSEM G PDVVT+
Sbjct: 307 RKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTF 366
Query: 248 NCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
L L C G + +GI+P++HT++ ++ + + A L G M
Sbjct: 367 TILVDAL--CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM 424
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
+GV+P +TY I+ + A++ ++ M KG P+ V N ++ K +
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
+A + + + GL PD T+N ++ + K G A +L+S M ++G PD I +
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
++ L+K EA ++ +++M L + Y+ +L GL G++++A E F G+ KG
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
+ T+ + LC+ + A ++L M + GC P+ TYN + GL++ G + +
Sbjct: 605 PPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMC 664
Query: 538 YLQLMK 543
+ MK
Sbjct: 665 FFHQMK 670
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 147/568 (25%), Positives = 257/568 (45%), Gaps = 49/568 (8%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L++++ VD A F +M + P + + L+ + K AI L + M G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
++ TF + +CLC+ L +L M MG PD+ T TI+ GL G V++A+
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCK------------------------------VGN 189
+M ++ Y + T ++ G+ K +G+
Sbjct: 664 CFFHQMKKLVYP-DFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGS 722
Query: 190 TSA------AIGYFKKVEGRGFKFD-VPVYTAIMDSLCKDGLVNEALGLWSEMTGK-GIQ 241
A A+ + +++ G D + I+ CK V+ A L+ + T G+Q
Sbjct: 723 ILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQ 782
Query: 242 PDVVTYNCLTRGLFHCSRGKVLKK--------GIMPDVHTFSAIVDNYCKEGMIARAERL 293
P + TYN L GL ++ + G +PDV T++ ++D Y K G I L
Sbjct: 783 PKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFEL 842
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY-DSMIYKGCLPSTVTYNTLIHGWC 352
M+ E N T+N +I+ + DA+ +Y D M + P+ TY LI G
Sbjct: 843 YKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLS 902
Query: 353 KIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRI 412
K ++ +A L M++ G P+ +N L+ GF KAG AA L M K G PD
Sbjct: 903 KSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLK 962
Query: 413 TYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGL 472
TY++++D L E + ++EL++ L+ + Y+++++GL RL++A F+ +
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 473 Q-AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
+ ++G+ D++TY ++ L G++++A ++ +++ G PN T+N ++G G
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLIN 559
+ Q M GFS + T E L N
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 182 bits (461), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 129/519 (24%), Positives = 234/519 (45%), Gaps = 11/519 (2%)
Query: 52 AAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVI 111
+A++ F KM PNI + + K A + + +G+ DS T+ +++
Sbjct: 451 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMM 510
Query: 112 NCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYR 171
C ++ D +L M + G EPD++ + +++N L V++A + MRM EM +
Sbjct: 511 KCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLK 570
Query: 172 CNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGL 231
T+ ++ GL K G AI F+ + +G + + + D LCK+ V AL +
Sbjct: 571 PTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKM 630
Query: 232 WSEMTGKGIQPDVVTYNCLTRGLFHCSRGK-------VLKKGIMPDVHTFSAIVDNYCKE 284
+M G PDV TYN + GL + K +KK + PD T ++ K
Sbjct: 631 LFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKA 690
Query: 285 GMIARAERLM-GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG-CLPSTV 342
+I A +++ F+ +P + LI + + + +A+ + ++ G C
Sbjct: 691 SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 750
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKELIST 401
+I CK + A +L + G+ P + T+N L+GG +A M A+++
Sbjct: 751 ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
++ G +PD TY +LD K E LY+E+ + + ++I++ GL G
Sbjct: 811 VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870
Query: 462 LKDAREFFSGLQA-KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
+ DA + + L + + TY ++ GL + G L +A+QL M + GC PN YN
Sbjct: 871 VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+ + G + G+ + + M +G D T +L++
Sbjct: 931 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 126/475 (26%), Positives = 225/475 (47%), Gaps = 8/475 (1%)
Query: 92 VKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCA 151
+++M G +++++ +I+ L + V M G P + T ++++ GL
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 152 EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV 211
+++ +GL M+ +G + N YT I L + G + A K+++ G DV
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL------TRGLFHCSR--GKVL 263
YT ++D+LC ++ A ++ +M +PD VTY L R L + ++
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
K G +PDV TF+ +VD CK G A + M G+ PN+ TYN+LI ++
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLD 415
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
DA++++ +M G P+ TY I + K A+ +M KG+ P+I NA +
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASL 475
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
KAG AK++ ++ G +PD +TY +++ K EA+ L E+ + +
Sbjct: 476 YSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCE 535
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+ + + +++ L R+ +A + F ++ LK V TY ++ GL + G + +A +L
Sbjct: 536 PDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
M +KGCPPN T+N L + +++ + K L M G D T +I
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 156/605 (25%), Positives = 249/605 (41%), Gaps = 83/605 (13%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ +D+ + +M + PN+ FT+ I ++ + A ++KRM G D T+
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 108 TIVINCLCRLSRTDLGFCVL-----------------------------------GLMFK 132
T++I+ LC + D V M K
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEK 356
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
G PD+VT T +V+ LC GN +A M + G N +T+ +I GL +V
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
A+ F +E G K Y +D K G AL + +M KGI P++V N
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLY 476
Query: 253 GLFHCSRGKVLKK--------GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
L R + K+ G++PD T++ ++ Y K G I A +L+ M G EP
Sbjct: 477 SLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEP 536
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
+V NSLIN D++ +A K++ M P+ VTYNTL+ G K K+ +A+ L
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELF 596
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
MV KG P+ T+N L CK A +++ M G +PD TY I+ GL K
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG------------- 471
EA+ + +++K+ +T+ + +L G+ ++DA + +
Sbjct: 657 GQVKEAMCFFHQMKKLVYPDFVTLCT-LLPGVVKASLIEDAYKIITNFLYNCADQPANLF 715
Query: 472 --------LQAKGLKIDV-FTYTIMVQGLCREG---------------LLDDAEQLLMDM 507
L G+ V F+ ++ G+CR+G + A L
Sbjct: 716 WEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKF 775
Query: 508 -EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF-SGNK 565
++ G P TYNL + GLL I ++ +K G D T L++ + K
Sbjct: 776 TKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGK 835
Query: 566 ADNTF 570
D F
Sbjct: 836 IDELF 840
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/566 (22%), Positives = 256/566 (45%), Gaps = 47/566 (8%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ ++ + +D A + F KM P+ + L++ + + M G
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
D TFTI+++ LC+ F L +M G+ P++ T T++ GL ++ AL
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M+ +G + +YT+ I+ K G++ +A+ F+K++ +G ++ A + SL
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDV 271
K G EA ++ + G+ PD VTYN + + ++++ G PDV
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDV 538
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
+++++ K + A ++ M + ++P V TYN+L+ ++Q+A+++++
Sbjct: 539 IVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEG 598
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
M+ KGC P+T+T+NTL CK ++ A+ +L +M++ G PD+ T+N ++ G K G
Sbjct: 599 MVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ 658
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA---------------VSLYRE 436
A M+K PD +T +L G+ K +A +L+ E
Sbjct: 659 VKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWE 717
Query: 437 ------LEKMNLDRHITIYS-IMLDGLCSYG---------------RLKDAREFFSGLQA 474
L + +D ++ ++ +G+C G + AR F
Sbjct: 718 DLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK 777
Query: 475 K-GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDIS 533
G++ + TY +++ GL +++ A+ + + ++ GC P+ TYN + + G I
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 534 RSEKYLQLMKGKGFSADATTTELLIN 559
+ + M A+ T ++I+
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVIS 863
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 145/557 (26%), Positives = 236/557 (42%), Gaps = 55/557 (9%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A F + I P+ + +++ K+ AI L+ M G E D +IN
Sbjct: 487 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLIN 546
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
L + R D + + M +M L+P +VT T++ GL G +++A+ L M + G
Sbjct: 547 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 606
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
N+ T + + LCK + A+ K+ G DV Y I+ L K+G V EA+ +
Sbjct: 607 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 666
Query: 233 SEMTGKGIQPDVVT-----------------YNCLTRGLFHCSR-----------GKVLK 264
+M K + PD VT Y +T L++C+ G +L
Sbjct: 667 HQMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA 725
Query: 265 KGIMPDVHTFS-----------------AIVDNYCKEGMIARAERLM-GFMARVGVEPNV 306
+ + + +FS I+ CK ++ A L F +GV+P +
Sbjct: 726 EAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKL 785
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
TYN LI D ++ A V+ + GC+P TYN L+ + K K+D+ L E
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELI-STMQKHGQLPDRITYAIILDGLFKCH 425
M + T N ++ G KAG A +L M P TY ++DGL K
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
EA L+ + + IY+I+++G G A F + +G++ D+ TY+
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYL----QL 541
++V LC G +D+ +++E G P+ YNL + GL G R E+ L ++
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL---GKSHRLEEALVLFNEM 1022
Query: 542 MKGKGFSADATTTELLI 558
+G + D T LI
Sbjct: 1023 KTSRGITPDLYTYNSLI 1039
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/446 (25%), Positives = 199/446 (44%), Gaps = 28/446 (6%)
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
V LM K ++ D T TI L +G ++QA +M E G+ N+Y++ +I+ L
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
K + A+ ++++ GF+ + Y+++M L K ++ +GL EM G++P+V
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNV- 258
Query: 246 TYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
+TF+ + + G I A ++ M G P+
Sbjct: 259 --------------------------YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPD 292
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
V TY LI+A C ++ A +V++ M P VTY TL+ + + +D
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
EM G PD+ T+ LV CKAG A + + M+ G LP+ TY ++ GL + H
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH 412
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
+A+ L+ +E + + Y + +D G A E F ++ KG+ ++
Sbjct: 413 RLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACN 472
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
+ L + G +A+Q+ +++ G P+ TYN+ ++ + G+I + K L M
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 546 GFSADATTTELLIN-FFSGNKADNTF 570
G D LIN + ++ D +
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAW 558
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 154/323 (47%), Gaps = 10/323 (3%)
Query: 35 PKRRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKR 94
P L+ + + ++ A D F ++ + P++ + L++ K L K
Sbjct: 786 PTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKE 845
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGF-CVLGLMFKMGLEPDIVTLTTIVNGLCAEG 153
M + EA++ T IVI+ L + D LM P T +++GL G
Sbjct: 846 MSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSG 905
Query: 154 NVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
+ +A L M + G R N + +ING K G AA FK++ G + D+ Y+
Sbjct: 906 RLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYS 965
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR---GKVL------K 264
++D LC G V+E L + E+ G+ PDVV YN + GL R VL
Sbjct: 966 VLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Query: 265 KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQD 324
+GI PD++T+++++ N GM+ A ++ + R G+EPNVFT+N+LI + L + +
Sbjct: 1026 RGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEH 1085
Query: 325 AMKVYDSMIYKGCLPSTVTYNTL 347
A VY +M+ G P+T TY L
Sbjct: 1086 AYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%)
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
+T T N ++ K+++ + M + + D T+ + G A +
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
M++ G + + +Y ++ L K F EA+ +YR + + YS ++ GL
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKR 236
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
+ ++ GLK +V+T+TI ++ L R G +++A ++L M+++GC P+ TY
Sbjct: 237 RDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 296
Query: 520 NLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNK 565
+ + L + +++ + MK D T L++ FS N+
Sbjct: 297 TVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNR 342
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/421 (30%), Positives = 204/421 (48%), Gaps = 16/421 (3%)
Query: 87 TAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIV 146
A+ L K+M G+ T ++N LC+ + ++ M +MG P+ V+ T++
Sbjct: 139 AALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLI 198
Query: 147 NGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVG----NTSAAIGYFKKVEG 202
GLC+ NV++AL L M++ G R N T I++ LC+ G N +
Sbjct: 199 KGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQ 258
Query: 203 RGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV 262
D+ + T +MDS K+G V +AL +W EM+ K + D V YN + RGL CS G +
Sbjct: 259 ANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGL--CSSGNM 316
Query: 263 L----------KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
+ K+G+ PDV T++ ++ CKEG A L G M GV P+ +Y +
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
I C+ + A + SM+ LP + +N +I G+ + A+S+L M++ G+
Sbjct: 377 IQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGV 436
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
P++ T NAL+ G+ K G + A + + M+ PD TY ++L A
Sbjct: 437 KPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQ 496
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
LY E+ + I Y+ ++ GLC GRLK A S +QA G+ ID + I+ +
Sbjct: 497 LYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYT 556
Query: 493 R 493
R
Sbjct: 557 R 557
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/447 (27%), Positives = 195/447 (43%), Gaps = 54/447 (12%)
Query: 42 SSMRDL---KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
S MRDL +DAA+ KM P + L+N + K + A LV+ M +
Sbjct: 126 SIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREM 185
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEG----- 153
G + ++ +I LC ++ D + M K G+ P+ VT IV+ LC +G
Sbjct: 186 GPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 154 ----------------------------------NVEQALGLAMRMDEMGYRCNSYTHGA 179
NV QAL + M + +S +
Sbjct: 246 NKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNV 305
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
II GLC GN AA G+ + RG DV Y ++ +LCK+G +EA L M G
Sbjct: 306 IIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG 365
Query: 240 IQPDVVTYNCLTRGLFHCSRGKVLKKG----------IMPDVHTFSAIVDNYCKEGMIAR 289
+ PD ++Y + +GL C G V + ++P+V ++ ++D Y + G +
Sbjct: 366 VAPDQISYKVIIQGL--CIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
A ++ M GV+PNV+T N+LI+ + ++ DA V + M P T TYN L+
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLG 483
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
C + + A L EM+ +G PDI T+ LV G C G A+ L+S +Q G
Sbjct: 484 AACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITI 543
Query: 410 DRITYAIILDGLFKCHFYPEAVSLYRE 436
D + + I+ + EA +Y++
Sbjct: 544 DHVPFLILAKKYTRLQRPGEAYLVYKK 570
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 198/422 (46%), Gaps = 16/422 (3%)
Query: 143 TTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEG 202
++I+ LC +G ++ AL L +M G TH ++NGLCK G A G +++
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 203 RGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG-- 260
G + Y ++ LC V++AL L++ M GI+P+ VT N + L C +G
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHAL--CQKGVI 242
Query: 261 ----KVLKKGIMP--------DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFT 308
K L + I+ D+ + ++D+ K G + +A + M++ V +
Sbjct: 243 GNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVV 302
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
YN +I C M A M+ +G P TYNTLI CK K D+A L G M
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ 362
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
N G+ PD ++ ++ G C G A E + +M K LP+ + + +++DG +
Sbjct: 363 NGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTS 422
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
A+S+ + + ++ + ++ G GRL DA + +++ + D TY +++
Sbjct: 423 SALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLL 482
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
C G L A QL +M +GC P+ TY V+GL +G + ++E L ++ G +
Sbjct: 483 GAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542
Query: 549 AD 550
D
Sbjct: 543 ID 544
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 132/269 (49%), Gaps = 39/269 (14%)
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
++S++ CLQ ++ A+ + MIY G +P +T+N L++G CK ++KA L+ EM
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII----------- 417
G +P+ ++N L+ G C A L +TM K+G P+R+T II
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 418 ----------------------------LDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
+D FK +A+ +++E+ + N+ +Y
Sbjct: 244 NNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
++++ GLCS G + A F + +G+ DVFTY ++ LC+EG D+A L M+
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 510 KGCPPNDCTYNLFVQGLLRRGDISRSEKY 538
G P+ +Y + +QGL GD++R+ ++
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 147/327 (44%), Gaps = 41/327 (12%)
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
S+I+ + C +G + A L M GV P + T+N L+N C ++ A + M
Sbjct: 125 SSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM--- 391
G P+ V+YNTLI G C + +DKA+ L M G+ P+ T N +V C+ G+
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 392 --PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
+E++ + Q + L D + I++D FK +A+ +++E+ + N+ +Y
Sbjct: 245 NNKKLLEEILDSSQANAPL-DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVY 303
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT------------------------ 485
++++ GLCS G + A F + +G+ DVFTY
Sbjct: 304 NVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Query: 486 -----------IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
+++QGLC G ++ A + L+ M + P +N+ + G R GD S
Sbjct: 364 GGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSS 423
Query: 535 SEKYLQLMKGKGFSADATTTELLINFF 561
+ L LM G + T LI+ +
Sbjct: 424 ALSVLNLMLSYGVKPNVYTNNALIHGY 450
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 78/171 (45%), Gaps = 6/171 (3%)
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE----LEKMNLDRHITI 448
L ++ S + + Q D +LD + K + ++ RE + + D ++I
Sbjct: 66 LCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSL--DRLASLRESVCQTKSFDYDDCLSI 123
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
+S ++ LC G+L A + G+ + T+ ++ GLC+ G ++ A+ L+ +M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
E G PN +YN ++GL ++ ++ M G + T ++++
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVH 234
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 187/363 (51%), Gaps = 8/363 (2%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P + +IN VK + ++ ++K M G+ + T+T+++ + + +
Sbjct: 257 PEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKL 316
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M + G+E D+ T++++ C +GN+++A L + E G +SYT+GA+I+G+CK
Sbjct: 317 FDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
VG AA +++ +G V+ ++D C+ G+V+EA ++ M KG Q DV T
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 247 YNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA 298
N + R ++++ G+ +++ ++D YCKEG + A+RL M+
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
GV+PN TYN +I A+C Q ++++A K+ +M G P + TY +LIHG C +D
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVD 556
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
+AM L EM KGL + T+ ++ G KAG A L M++ G D Y ++
Sbjct: 557 EAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Query: 419 DGL 421
+
Sbjct: 617 GSM 619
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/460 (26%), Positives = 212/460 (46%), Gaps = 27/460 (5%)
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
G+ D + + + + R DL + M G++ + +LT +V GLC G VE++
Sbjct: 184 GLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKS 243
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L G + +YT+ IIN K + S G K ++ G ++ YT +M+
Sbjct: 244 KKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMEL 303
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIV 278
K+G +++A L+ EM +GI+ DV H +++++
Sbjct: 304 SVKNGKMSDAEKLFDEMRERGIESDV---------------------------HVYTSLI 336
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
C++G + RA L + G+ P+ +TY +LI+ C +M A + + M KG
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
+ V +NTLI G+C+ +D+A + M KG D+ T N + F + AK+
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW 456
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+ M + G ++Y ++D K EA L+ E+ + + Y++M+ C
Sbjct: 457 LFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCK 516
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
G++K+AR+ + ++A G+ D +TYT ++ G C +D+A +L +M KG N T
Sbjct: 517 QGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT 576
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
Y + + GL + G + MK KG++ D LI
Sbjct: 577 YTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 174 bits (441), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 193/384 (50%), Gaps = 11/384 (2%)
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL-- 254
F+++ G K V T +++ LC+ G V ++ L E + KGI+P+ TYN +
Sbjct: 212 FRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK 271
Query: 255 ---FHCSRG--KVLKK-GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFT 308
F G KV+KK G++ + T++ +++ K G ++ AE+L M G+E +V
Sbjct: 272 QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHV 331
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
Y SLI+ +C + M+ A ++D + KG PS+ TY LI G CK+ +M A L+ EM
Sbjct: 332 YTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQ 391
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
+KG+ +N L+ G+C+ GM A + M++ G D T I + Y
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 429 EAVS-LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIM 487
EA L+R +E + Y+ ++D C G +++A+ F + +KG++ + TY +M
Sbjct: 452 EAKQWLFRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 488 VQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
+ C++G + +A +L +ME G P+ TY + G ++ + + M KG
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 548 SADATTTELLINFFS-GNKADNTF 570
++ T ++I+ S K+D F
Sbjct: 571 DQNSVTYTVMISGLSKAGKSDEAF 594
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 196/438 (44%), Gaps = 49/438 (11%)
Query: 68 NIKEFTVLINLVV--KMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFC 125
+I E + ++ LV K + + + +RM G++ ++ TIV+ LCR +
Sbjct: 186 SIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKK 245
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
++ G++P+ T TI+N + + G+ M + G N T+ ++
Sbjct: 246 LIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSV 305
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
K G S A F ++ RG + DV VYT+++ C+ G + A L+ E+T KG+ P
Sbjct: 306 KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY 365
Query: 246 TYNCLTRGLFHCSRGKV----------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
TY L G+ C G++ KG+ F+ ++D YC++GM+ A +
Sbjct: 366 TYGALIDGV--CKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYD 423
Query: 296 FMARVGVEPNVFT-----------------------------------YNSLINAHCLQD 320
M + G + +VFT Y +LI+ +C +
Sbjct: 424 VMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEG 483
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+++A +++ M KG P+ +TYN +I+ +CK K+ +A L M G+ PD T+
Sbjct: 484 NVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYT 543
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
+L+ G C A A L S M G + +TY +++ GL K EA LY E+++
Sbjct: 544 SLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Query: 441 NLDRHITIYSIMLDGLCS 458
+Y+ ++ + S
Sbjct: 604 GYTIDNKVYTALIGSMHS 621
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 139/289 (48%), Gaps = 4/289 (1%)
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
F VDN GM R+ +M + G+ + + + A + ++ ++++ M+
Sbjct: 161 FRVYVDN----GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMV 216
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
G + + ++ G C+ +++K+ L+ E KG+ P+ T+N ++ + K
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 394 AAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIML 453
+ ++ M+K G + +++TY ++++ K +A L+ E+ + ++ + +Y+ ++
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLI 336
Query: 454 DGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCP 513
C G +K A F L KGL +TY ++ G+C+ G + AE L+ +M+ KG
Sbjct: 337 SWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVN 396
Query: 514 PNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+N + G R+G + + +M+ KGF AD T + + F+
Sbjct: 397 ITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFN 445
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 146/542 (26%), Positives = 252/542 (46%), Gaps = 34/542 (6%)
Query: 50 VDAAVDFFNKM---AAINPFPNIKEFTVLINLVVKMKHYTTA--ISLVKRMHSLGIEADS 104
VD A ++M ++ P PN ++++ V K + T I+L+ R S G+ +S
Sbjct: 201 VDDAFKVLDEMLQKESVFP-PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNS 259
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR 164
T I+ LC+ +R + + +L + K + +++ L ++ + L ++
Sbjct: 260 VWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLK 319
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG------FKFDVPVYTAIMDS 218
MDE+ R + T G +IN LCK A+ F+++ G+ K D + ++D
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 219 LCKDGLVNEALGLWSEMT-GKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGI 267
LCK G + EA L M + P+ VTYNCL G +C GK+ + I
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDG--YCRAGKLETAKEVVSRMKEDEI 437
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
P+V T + IV C+ + A M + GV+ NV TY +LI+A C ++ AM
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
Y+ M+ GC P Y LI G C++++ A+ ++ ++ G + D+ +N L+G FC
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
E+++ M+K G+ PD ITY ++ K + + ++ + LD +T
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 448 IYSIMLDGLCSYGRLKDAREFFS--GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
Y ++D CS G L +A + F GL +K + + Y I++ + G A L
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK---GKGFSADATTTELLINFFS 562
+M+ K PN TYN + L + ++ E L+LM + + T E+L+ S
Sbjct: 677 EMKMKMVRPNVETYNALFKCL---NEKTQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Query: 563 GN 564
G+
Sbjct: 734 GS 735
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 200/446 (44%), Gaps = 21/446 (4%)
Query: 139 IVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
IV ++ G V Q++ + R+D NS +++ L + G A
Sbjct: 152 IVATKLLIRWFGRMGMVNQSVLVYERLD--SNMKNSQVRNVVVDVLLRNGLVDDAFKVLD 209
Query: 199 KVEGRGFKFDVPVYTA--IMDSLCKDGLVNEA--LGLWSEMTGKGIQPDVVTYNCLTRGL 254
++ + F TA ++ + K+ L+ E + L S + G+ P+ V L
Sbjct: 210 EMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 255 FHCSRGKV-------LKKGIMP-DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
+R L K P + F+A++ + I+R L+ M V + P+V
Sbjct: 270 CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDV 329
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGC------LPSTVTYNTLIHGWCKIKKMDKA 360
T LIN C ++ +A++V++ M K ++ +NTLI G CK+ ++ +A
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 361 MSLLGEM-VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD 419
LL M + + P+ T+N L+ G+C+AG AKE++S M++ P+ +T I+
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG 449
Query: 420 GLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI 479
G+ + H AV + ++EK + ++ Y ++ CS ++ A ++ + G
Sbjct: 450 GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP 509
Query: 480 DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYL 539
D Y ++ GLC+ DA +++ ++E G + YN+ + + + + + L
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 540 QLMKGKGFSADATTTELLINFFSGNK 565
M+ +G D+ T LI+FF +K
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHK 595
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 118/254 (46%), Gaps = 13/254 (5%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
+ V+ A+ ++ KM P+ K + LI+ + +++ AI +V+++ G D
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+ ++I C + + + +L M K G +PD +T T+++ + E + +M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF--DVPVYTAIMDSLCKDGL 224
E G T+GA+I+ C VG A+ FK + G K + +Y ++++ K G
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-GLHSKVNPNTVIYNILINAFSKLGN 667
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKE 284
+AL L EM K ++P+V TYN L + L ++G+ L K +V+ C+
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK-------LMDEMVEQSCEP 720
Query: 285 GMIARA---ERLMG 295
I ERL G
Sbjct: 721 NQITMEILMERLSG 734
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 237/509 (46%), Gaps = 21/509 (4%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ + L+N + + A LV M + G D TFT +I C + ++ V
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM-----DEMGYRCNSYTHGAII 181
M G+ P+ +TL+ ++ G +VE L + +E + ++
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPV---YTAIMDSLCKDGLVNEALGLWSEMTGK 238
+ +C+ G + F+ E V V Y ++DSLC+ + A + M K
Sbjct: 280 DSMCREGYFN---DIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSK 336
Query: 239 GIQPDVVTYNCLTRGLFH---CSRG-KVLKKG----IMPDVHTFSAIVDNYCKEGMIARA 290
G++P +YN + GL C R ++L++G P +T+ ++++ CKE +A
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
++ M R YN + C+ D + + V SM+ C P T NT+I+G
Sbjct: 397 RNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVING 456
Query: 351 WCKIKKMDKAMSLLGEMVN-KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL- 408
CK+ ++D AM +L +M+ K PD T N ++ G G A ++++ + ++
Sbjct: 457 LCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIK 516
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
P + Y ++ GLFK H EA+S++ +LEK ++ T Y+I++DGLC ++ A++F
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKF 576
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLR 528
+ + + D F Y ++GLC+ G L DA L D+ + G PN YN + R
Sbjct: 577 WDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSR 636
Query: 529 RGDISRSEKYLQLMKGKGFSADATTTELL 557
G + + L+ M+ G + DA T +L
Sbjct: 637 SGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/451 (24%), Positives = 198/451 (43%), Gaps = 24/451 (5%)
Query: 111 INCLCRLSRT-DLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
I+ +C + R D +L + G PD + L+++++ LC G ++A + G
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV---YTAIMDSLCKDGLVN 226
+ + T II L + + +G ++ G +F VP Y +M+ LC V
Sbjct: 121 FIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEF-VPSLTNYNRLMNQLCTIYRVI 179
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK--------GIMPDVHTFSAIV 278
+A L +M +G PDVVT+ L G +V K GI P+ T S ++
Sbjct: 180 DAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Query: 279 DNYCKEGMIARAERLMGFM-----ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
+ K + +LM + + +L+++ C + D ++ ++M
Sbjct: 240 GGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMS 299
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
+ Y +I C+ ++ A ++ M +KGL P ++NA++ G CK G +
Sbjct: 300 LCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCM 359
Query: 394 AAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR-ELEKMNLDRHITIYSIM 452
A +L+ + P TY ++++ L K +A ++ L K DR IY+I
Sbjct: 360 RAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADR-TRIYNIY 418
Query: 453 LDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD-MEEKG 511
L GLC + + + D +T ++ GLC+ G +DDA ++L D M K
Sbjct: 419 LRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKF 478
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
C P+ T N + GLL +G R+E+ L ++
Sbjct: 479 CAPDAVTLNTVMCGLLAQG---RAEEALDVL 506
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 184/457 (40%), Gaps = 85/457 (18%)
Query: 46 DLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS-LGIEADS 104
+++ ++ A F++M PN +VLI +KM+ T L+K + + E D+
Sbjct: 209 EIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDT 268
Query: 105 ---------------------------------------FTFTIVINCLCRLSRTDLGFC 125
F + +I+ LCR R
Sbjct: 269 SMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAAR 328
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
++ +M GL+P + I++GLC +G +A L E + + YT+ ++ LC
Sbjct: 329 IVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLC 388
Query: 186 KVGNTSAAIGYFK---KVEG-----------RGF---------------------KFDVP 210
K +T A + + EG RG + D
Sbjct: 389 KELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEY 448
Query: 211 VYTAIMDSLCKDGLVNEALGLWSE-MTGKGIQPDVVTYNCLTRGLFHCSRGK----VLKK 265
+++ LCK G V++A+ + + MTGK PD VT N + GL R + VL +
Sbjct: 449 TLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNR 508
Query: 266 -----GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
I P V ++A++ K A + G + + V + TY +I+ C+ +
Sbjct: 509 VMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTN 568
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
++ A K +D +I+ Y + G C+ + A L ++ + G P++ +N
Sbjct: 569 KVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYN 628
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
++ ++G+ A +++ M+K+GQ PD +T+ I+
Sbjct: 629 TVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 165/377 (43%), Gaps = 43/377 (11%)
Query: 181 INGLCKVG-NTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
I+ +C V N A+ + RG++ D ++++ SLC G +EA + G
Sbjct: 61 IHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASG 120
Query: 240 IQPDVVTYNCLTRGLFHCSRGKV-----------LKKGIMPDVHTFSAIVDNYCKEGMIA 288
PD T N + L + SR V KK +P + ++ +++ C +
Sbjct: 121 FIPDERTCNVIIARLLY-SRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVI 179
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
A +L+ M G P+V T+ +LI +C +++ A KV+D M G P+++T + LI
Sbjct: 180 DAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
G+ K++ ++ L+ E+ W + + A L+ +M + G
Sbjct: 240 GGFLKMRDVETGRKLMKEL-----------WEYMKNETDTSMKAAAFANLVDSMCREGYF 288
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
D A E +SL E +N++ Y M+D LC Y R A
Sbjct: 289 NDIFEIA-------------ENMSL---CESVNVE---FAYGHMIDSLCRYRRNHGAARI 329
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLR 528
+++KGLK +Y ++ GLC++G A QLL + E P++ TY L ++ L +
Sbjct: 330 VYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCK 389
Query: 529 RGDISRSEKYLQLMKGK 545
D ++ L+LM K
Sbjct: 390 ELDTGKARNVLELMLRK 406
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%)
Query: 73 TVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFK 132
TV+ L+ + + L + M I+ + VI L +L + D V G + K
Sbjct: 488 TVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEK 547
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
+ D T I++GLC V+ A + R +++ + A + GLC+ G S
Sbjct: 548 ASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSD 607
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
A + + G +V Y ++ + GL EA + EM G PD VT+ L +
Sbjct: 608 ACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRILDK 667
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 141/517 (27%), Positives = 242/517 (46%), Gaps = 31/517 (5%)
Query: 50 VDAAVDFFNKM---AAINPFPNIKEFTVLINLVVKMKHYTTA--ISLVKRMHSLGIEADS 104
VD A ++M ++ P PN ++++ V K + T I+L+ R S G+ +S
Sbjct: 201 VDDAFKVLDEMLQKESVFP-PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNS 259
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR 164
T I+ LC+ +R + + +L + K + +++ L ++ + L ++
Sbjct: 260 VWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLK 319
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG------FKFDVPVYTAIMDS 218
MDE+ R + T G +IN LCK A+ F+++ G+ K D + ++D
Sbjct: 320 MDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDG 379
Query: 219 LCKDGLVNEALGLWSEMT-GKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGI 267
LCK G + EA L M + P+ VTYNCL G +C GK+ + I
Sbjct: 380 LCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDG--YCRAGKLETAKEVVSRMKEDEI 437
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
P+V T + IV C+ + A M + GV+ NV TY +LI+A C ++ AM
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
Y+ M+ GC P Y LI G C++++ A+ ++ ++ G + D+ +N L+G FC
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFC 557
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
E+++ M+K G+ PD ITY ++ K + + ++ + LD +T
Sbjct: 558 DKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVT 617
Query: 448 IYSIMLDGLCSYGRLKDAREFFS--GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
Y ++D CS G L +A + F GL +K + + Y I++ + G A L
Sbjct: 618 TYGAVIDAYCSVGELDEALKLFKDMGLHSK-VNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
+M+ K PN TYN + L + ++ E L+LM
Sbjct: 677 EMKMKMVRPNVETYNALFKCL---NEKTQGETLLKLM 710
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 195/464 (42%), Gaps = 26/464 (5%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMG--LEPDIVTLTTIVNGLCAEG--NVEQA 158
+S +V++ L R D F VL M + P+ +T +++ + E E+
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKI 243
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
+ L R G NS I+ LCK + A + + P + A++
Sbjct: 244 IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSC 303
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIV 278
L ++ ++ L +M I+PDVVT L L R + + F +
Sbjct: 304 LGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRR-------VDEALEVFEQMR 356
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM-IYKGC 337
+G + +A+ + +N+LI+ C ++++A ++ M + + C
Sbjct: 357 GKRTDDGNVIKADSI--------------HFNTLIDGLCKVGRLKEAEELLVRMKLEERC 402
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
+P+ VTYN LI G+C+ K++ A ++ M + P++ T N +VGG C+ A
Sbjct: 403 VPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVV 462
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
M+K G + +TY ++ +A+ Y ++ + IY ++ GLC
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC 517
R DA L+ G +D+ Y +++ C + + ++L DME++G P+
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 518 TYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
TYN + + D E+ ++ M+ G TT +I+ +
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAY 626
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/446 (23%), Positives = 200/446 (44%), Gaps = 21/446 (4%)
Query: 139 IVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
IV ++ G V Q++ + R+D NS +++ L + G A
Sbjct: 152 IVATKLLIRWFGRMGMVNQSVLVYERLD--SNMKNSQVRNVVVDVLLRNGLVDDAFKVLD 209
Query: 199 KVEGRGFKFDVPVYTA--IMDSLCKDGLVNEA--LGLWSEMTGKGIQPDVVTYNCLTRGL 254
++ + F TA ++ + K+ L+ E + L S + G+ P+ V L
Sbjct: 210 EMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSL 269
Query: 255 FHCSRGKV-------LKKGIMP-DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
+R L K P + F+A++ + I+R L+ M V + P+V
Sbjct: 270 CKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDV 329
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGC------LPSTVTYNTLIHGWCKIKKMDKA 360
T LIN C ++ +A++V++ M K ++ +NTLI G CK+ ++ +A
Sbjct: 330 VTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEA 389
Query: 361 MSLLGEM-VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD 419
LL M + + P+ T+N L+ G+C+AG AKE++S M++ P+ +T I+
Sbjct: 390 EELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVG 449
Query: 420 GLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI 479
G+ + H AV + ++EK + ++ Y ++ CS ++ A ++ + G
Sbjct: 450 GMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP 509
Query: 480 DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYL 539
D Y ++ GLC+ DA +++ ++E G + YN+ + + + + + L
Sbjct: 510 DAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Query: 540 QLMKGKGFSADATTTELLINFFSGNK 565
M+ +G D+ T LI+FF +K
Sbjct: 570 TDMEKEGKKPDSITYNTLISFFGKHK 595
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 148/324 (45%), Gaps = 13/324 (4%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN + LI+ + TA +V RM I+ + T ++ +CR ++
Sbjct: 404 PNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVF 463
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M K G++ ++VT T+++ C+ NVE+A+ +M E G ++ + A+I+GLC+
Sbjct: 464 FMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQ 523
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
V AI +K++ GF D+ Y ++ C + + ++M +G +PD +T
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 247 YNCLT------RGLFHCSR--GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERL---MG 295
YN L + R ++ + G+ P V T+ A++D YC G + A +L MG
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
++V PN YN LINA A+ + + M K P+ TYN L +
Sbjct: 644 LHSKVN--PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKT 701
Query: 356 KMDKAMSLLGEMVNKGLTPDICTW 379
+ + + L+ EMV + W
Sbjct: 702 QGETLLKLMDEMVEHLVNQIRSQW 725
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 108/221 (48%), Gaps = 3/221 (1%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
+ V+ A+ ++ KM P+ K + LI+ + +++ AI +V+++ G D
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+ ++I C + + + +L M K G +PD +T T+++ + E + +M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF--DVPVYTAIMDSLCKDGL 224
E G T+GA+I+ C VG A+ FK + G K + +Y ++++ K G
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-GLHSKVNPNTVIYNILINAFSKLGN 667
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK 265
+AL L EM K ++P+V TYN L + L ++G+ L K
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLK 708
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 125/512 (24%), Positives = 232/512 (45%), Gaps = 36/512 (7%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V A+ F +++ + P+ I+ ++ ++ + + S G +F
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA-LGLAMRMDEM 168
V++ +C+L + ++ M + G EPD+++ ++++G C G++ A L L
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASH 121
Query: 169 GYRCNS--YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
G+ C + ++ NG K+ Y V + +V Y+ +D+ CK G +
Sbjct: 122 GFICKPDIVSFNSLFNGFSKMKMLDEVFVYMG-VMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGM 286
AL + M + P+VVT+ CL +D YCK G
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCL---------------------------IDGYCKAGD 213
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
+ A L M RV + NV TY +LI+ C + +MQ A ++Y M+ P+++ Y T
Sbjct: 214 LEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTT 273
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG 406
+I G+ + D AM L +M+N+G+ DI + ++ G C G A E++ M+K
Sbjct: 274 IIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSD 333
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
+PD + + +++ FK AV++Y +L + + + S M+DG+ G+L +A
Sbjct: 334 LVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
+F +A + YT+++ LC+EG + E+L + E G P+ Y ++ GL
Sbjct: 394 VYFCIEKANDV-----MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGL 448
Query: 527 LRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
++G++ + K M +G D LI
Sbjct: 449 CKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 175/361 (48%), Gaps = 11/361 (3%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A+ F+ M PN+ FT LI+ K A+SL K M + + + T+T +I+
Sbjct: 182 ALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALID 241
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
C+ + M + +EP+ + TTI++G G+ + A+ +M G R
Sbjct: 242 GFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ +G II+GLC G A + +E D+ ++T +M++ K G + A+ ++
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM-------PDVHTFSAIVDNYCKEG 285
++ +G +PDVV + + G+ ++ L + I+ DV ++ ++D CKEG
Sbjct: 362 HKLIERGFEPDVVALSTMIDGI---AKNGQLHEAIVYFCIEKANDV-MYTVLIDALCKEG 417
Query: 286 MIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYN 345
ERL ++ G+ P+ F Y S I C Q + DA K+ M+ +G L + Y
Sbjct: 418 DFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYT 477
Query: 346 TLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH 405
TLI+G M +A + EM+N G++PD ++ L+ + K G AA +L+ MQ+
Sbjct: 478 TLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRR 537
Query: 406 G 406
G
Sbjct: 538 G 538
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 117/524 (22%), Positives = 218/524 (41%), Gaps = 84/524 (16%)
Query: 34 TPKR---RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVK---MKHYTT 87
TP R ++S + L V A D + M P++ + LI+ + ++ +
Sbjct: 53 TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
+ ++ H + D +F + N ++ D F +G+M K P++VT +T ++
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWID 171
Query: 148 GLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF 207
C G ++ AL M N T +I+G CK G+ A+ +K++
Sbjct: 172 TFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSL 231
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG------- 260
+V YTA++D CK G + A ++S M ++P+ + Y + G F RG
Sbjct: 232 NVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ--RGDSDNAMK 289
Query: 261 ---KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC 317
K+L +G+ D+ + I+ C G + A ++ M + + P++ + +++NA+
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK------------IKKMDKAM---- 361
+M+ A+ +Y +I +G P V +T+I G K I+K + M
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVL 409
Query: 362 --------------SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
L ++ GL PD + + + G CK G + A +L + M + G
Sbjct: 410 IDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGL 469
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
L D + Y + IY GL S G + +AR+
Sbjct: 470 LLDLLAYTTL------------------------------IY-----GLASKGLMVEARQ 494
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
F + G+ D + ++++ +EG + A LL+DM+ +G
Sbjct: 495 VFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRG 538
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 170/386 (44%), Gaps = 45/386 (11%)
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFS 275
+V EAL S + PD T N L + + G ++ +G P +F+
Sbjct: 1 MVREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFN 60
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD--------------- 320
++V CK G + AE ++ M R G EP+V +YNSLI+ HC
Sbjct: 61 SVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 321 ----------------------QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
+M D + VY ++ K C P+ VTY+T I +CK ++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQ 180
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
A+ M L+P++ T+ L+ G+CKAG A L M++ + +TY ++
Sbjct: 181 LALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALI 240
Query: 419 DGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLK 478
DG K A +Y + + ++ + +Y+ ++DG G +A +F + + +G++
Sbjct: 241 DGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMR 300
Query: 479 IDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKY 538
+D+ Y +++ GLC G L +A +++ DME+ P+ + + + G + +
Sbjct: 301 LDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNM 360
Query: 539 LQLMKGKGFSADATTTELLINFFSGN 564
+ +GF D +I+ + N
Sbjct: 361 YHKLIERGFEPDVVALSTMIDGIAKN 386
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 13/202 (6%)
Query: 52 AAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVI 111
AAV+ ++K+ P++ + +I+ + K AI ++ +A+ +T++I
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-----VYFCIEKANDVMYTVLI 410
Query: 112 NCLCRLSRTDLGFCVLGLMF----KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
+ LC+ + F + +F + GL PD T+ + GLC +GN+ A L RM +
Sbjct: 411 DALCK----EGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQ 466
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G + + +I GL G A F ++ G D V+ ++ + K+G +
Sbjct: 467 EGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAA 526
Query: 228 ALGLWSEMTGKGIQPDVVTYNC 249
A L +M +G+ V +C
Sbjct: 527 ASDLLLDMQRRGLVTAVSDADC 548
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 181 bits (460), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/473 (27%), Positives = 217/473 (45%), Gaps = 28/473 (5%)
Query: 92 VKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCA 151
++ + S G+ DS+ F ++I+ ++ + G M + PD+ T I+ +
Sbjct: 115 LEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMR 174
Query: 152 EGNVEQALGLAMRMDEMGYRC--NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDV 209
E V L A+ + + C N YT G +++GL K G TS A F + GRG +
Sbjct: 175 E-EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 210 PVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL------ 263
YT ++ LC+ G ++A L+ EM G PD V +N L G C G+++
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGF--CKLGRMVEAFELL 291
Query: 264 ----KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQ 319
K G + + +S+++D + +A L M + ++P++ Y LI
Sbjct: 292 RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKA 351
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
+++DA+K+ SM KG P T YN +I C +++ SL EM PD CT
Sbjct: 352 GKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411
Query: 380 NALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
L+ C+ G+ A+E+ + ++K G P T+ ++DGL K EA L L K
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLL---LHK 468
Query: 440 MNLDRHITIYSIM-------LDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
M + R +++ + D + G + A + G D+ +Y +++ G C
Sbjct: 469 MEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFC 528
Query: 493 REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
R G +D A +LL ++ KG P+ TYN + GL R G R E+ +L K
Sbjct: 529 RAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVG---REEEAFKLFYAK 578
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 204/443 (46%), Gaps = 48/443 (10%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMK-HYTTAISLVKRMHSL 98
L+S+ + + AV+ F +M + P++ + V++ ++++ + + A ++ M
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
+ +TF I+++ L + RT + M G+ P+ VT T +++GLC G+ + A
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDA 252
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L M G +S H A+++G CK+G A + E GF + Y++++D
Sbjct: 253 RKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDG 312
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPD 270
L + +A L++ M K I+PD++ Y L +GL + + KGI PD
Sbjct: 313 LFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
+ ++A++ C G++ L M+ P+ T+ LI + C +++A +++
Sbjct: 373 TYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFT 432
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM----------------------- 367
+ GC PS T+N LI G CK ++ +A LL +M
Sbjct: 433 EIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTM 492
Query: 368 ----------------VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
+ G +PDI ++N L+ GFC+AG A +L++ +Q G PD
Sbjct: 493 VESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDS 552
Query: 412 ITYAIILDGLFKCHFYPEAVSLY 434
+TY +++GL + EA L+
Sbjct: 553 VTYNTLINGLHRVGREEEAFKLF 575
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 217/473 (45%), Gaps = 27/473 (5%)
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
F +VI+ L + DL + L + G+ D +++ G E+A+ RM
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 167 EMGYRCNSYTHGAIINGLCKVGNT-SAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
E R + +T+ I+ + + A + ++ ++ + +MD L K G
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFS 275
++A ++ +MTG+GI P+ VTY L GL C RG ++ G PD +
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGL--CQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK 335
A++D +CK G + A L+ + G + Y+SLI+ + A ++Y +M+ K
Sbjct: 273 ALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKK 332
Query: 336 GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAA 395
P + Y LI G K K++ A+ LL M +KG++PD +NA++ C G+
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
+ L M + PD T+ I++ + + EA ++ E+EK + ++ ++DG
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVF---------TYTIMVQGLCREGLLDDAEQLLMD 506
LC G LK+AR ++ G +F ++ MV+ G + A + L
Sbjct: 453 LCKSGELKEARLLLHKMEV-GRPASLFLRLSHSGNRSFDTMVES----GSILKAYRDLAH 507
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+ G P+ +YN+ + G R GDI + K L +++ KG S D+ T LIN
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLIN 560
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 1/264 (0%)
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK- 359
GV + + + LI+A+ + A++ + M C P TYN ++ + +
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFML 181
Query: 360 AMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD 419
A ++ EM+ +P++ T+ L+ G K G A+++ M G P+R+TY I++
Sbjct: 182 AFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILIS 241
Query: 420 GLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI 479
GL + +A L+ E++ ++ +LDG C GR+ +A E + G +
Sbjct: 242 GLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVL 301
Query: 480 DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYL 539
+ Y+ ++ GL R A +L +M +K P+ Y + +QGL + G I + K L
Sbjct: 302 GLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL 361
Query: 540 QLMKGKGFSADATTTELLINFFSG 563
M KG S D +I G
Sbjct: 362 SSMPSKGISPDTYCYNAVIKALCG 385
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/400 (28%), Positives = 202/400 (50%), Gaps = 20/400 (5%)
Query: 151 AEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP 210
A G E A+ R +E G + A+I+ L + G + A F+ G+ V
Sbjct: 215 AVGFYEFAVKRERRKNEQGKLAS-----AMISTLGRYGKVTIAKRIFETAFAGGYGNTVY 269
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG---------- 260
++A++ + + GL EA+ +++ M G++P++VTYN + C +G
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA---CGKGGMEFKQVAKF 326
Query: 261 --KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCL 318
++ + G+ PD TF++++ + G+ A L M +E +VF+YN+L++A C
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
QM A ++ M K +P+ V+Y+T+I G+ K + D+A++L GEM G+ D +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
+N L+ + K G A +++ M G D +TY +L G K Y E ++ E++
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
+ ++ ++ YS ++DG G K+A E F ++ GL+ DV Y+ ++ LC+ GL+
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVG 566
Query: 499 DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKY 538
A L+ +M ++G PN TYN + R + RS Y
Sbjct: 567 SAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 183/398 (45%), Gaps = 18/398 (4%)
Query: 85 YTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTT 144
Y A+ +R + G A + +I+ L R + + + F G + +
Sbjct: 219 YEFAVKRERRKNEQGKLASA-----MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSA 273
Query: 145 IVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG-YFKKVEGR 203
+++ G E+A+ + M E G R N T+ A+I+ K G + +F +++
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 204 GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV- 262
G + D + +++ + GL A L+ EMT + I+ DV +YN L + C G++
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI--CKGGQMD 391
Query: 263 ---------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLI 313
K IMP+V ++S ++D + K G A L G M +G+ + +YN+L+
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 314 NAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT 373
+ + + ++A+ + M G VTYN L+ G+ K K D+ + EM + +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 374 PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSL 433
P++ T++ L+ G+ K G+ A E+ + G D + Y+ ++D L K AVSL
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSL 571
Query: 434 YRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
E+ K + ++ Y+ ++D + + ++ +G
Sbjct: 572 IDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG 609
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 190/400 (47%), Gaps = 42/400 (10%)
Query: 56 FFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLC 115
FF++M P+ F L+ + + + A +L M + IE D F++ +++ +C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 116 RLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSY 175
+ + DL F +L M + P++V+ +T+++G G ++AL L M +G +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
++ +++ KVG + A+ +++ G K DV Y A++ K G +E +++EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 236 TGKGIQPDVVTYNCLTRGLFHCSRGKVLKK-----------GIMPDVHTFSAIVDNYCKE 284
+ + P+++TY+ L G S+G + K+ G+ DV +SA++D CK
Sbjct: 506 KREHVLPNLLTYSTLIDGY---SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP-STVT 343
G++ A L+ M + G+ PNV TYNS+I+A M + + G LP S+
Sbjct: 563 GLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG----GSLPFSSSA 618
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL---IS 400
+ L + ++ + L G++ + N C+ GM +EL +
Sbjct: 619 LSALTE-----TEGNRVIQLFGQLTTES--------NNRTTKDCEEGM----QELSCILE 661
Query: 401 TMQKHGQL---PDRITYAIILDGLFKCHFYPEAVSLYREL 437
+K QL P+ +T++ IL+ +C+ + +A L EL
Sbjct: 662 VFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 146/291 (50%), Gaps = 3/291 (1%)
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ--DAMKV 328
V+ FSA++ Y + G+ A + M G+ PN+ TYN++I+A C + M+ K
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAKF 326
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+D M G P +T+N+L+ + + A +L EM N+ + D+ ++N L+ CK
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G A E+++ M +P+ ++Y+ ++DG K + EA++L+ E+ + +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVS 446
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
Y+ +L GR ++A + + + G+K DV TY ++ G ++G D+ +++ +M+
Sbjct: 447 YNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMK 506
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+ PN TY+ + G + G + + + K G AD LI+
Sbjct: 507 REHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 150/320 (46%), Gaps = 35/320 (10%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A + +M PN+ ++ +I+ K + A++L M LGI D ++
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+++ ++ R++ +L M +G++ D+VT ++ G +G ++ + M
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH 509
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
N T+ +I+G K G A+ F++ + G + DV +Y+A++D+LCK+GLV A+
Sbjct: 510 VLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAV 569
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCS----RGKVLKKGIMP-DVHTFSAIVDNY--- 281
L EMT +GI P+VVTYN + + G +P SA+ +
Sbjct: 570 SLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNR 629
Query: 282 -------------------CKEGMIARAERLMGF--MARVGVEPNVFTYNSLINAHCLQD 320
C+EGM + L F M ++ ++PNV T+++++NA +
Sbjct: 630 VIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCN 689
Query: 321 QMQDA------MKVYDSMIY 334
+DA ++++D+ +Y
Sbjct: 690 SFEDASMLLEELRLFDNKVY 709
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 124/509 (24%), Positives = 221/509 (43%), Gaps = 31/509 (6%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
A + F K++ P+ EF +++ + A +RM + GI S +T +
Sbjct: 295 QAVISAFEKISK----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSL 350
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
I+ D + M + G+E +VT + IV G G+ E A +
Sbjct: 351 IHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHK 410
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
N+ +G II C+ N A +++E G + +Y +MD + L
Sbjct: 411 TLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLV 470
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
++ + G P VVTY CL ++ Y K G I++A
Sbjct: 471 VFKRLKECGFTPTVVTYGCL---------------------------INLYTKVGKISKA 503
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
+ M GV+ N+ TY+ +IN +A V++ M+ +G P + YN +I
Sbjct: 504 LEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISA 563
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
+C + MD+A+ + EM P T+ ++ G+ K+G + E+ M++ G +P
Sbjct: 564 FCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 623
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
T+ +++GL + +AV + E+ + + Y+ ++ G S G A E+F+
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 683
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
LQ +GL +D+FTY +++ C+ G + A + +M + P N YN+ + G RRG
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 531 DISRSEKYLQLMKGKGFSADATTTELLIN 559
D+ + +Q MK +G D T I+
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/514 (23%), Positives = 239/514 (46%), Gaps = 8/514 (1%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A + F +M A P + +T LI+ + A+S V++M GIE T+++++
Sbjct: 328 ARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVG 387
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
+ + ++ + I+ C N+E+A L M+E G
Sbjct: 388 GFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDA 447
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ +++G V + + FK+++ GF V Y +++ K G +++AL +
Sbjct: 448 PIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVS 507
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDVHTFSAIVDNYCKE 284
M +G++ ++ TY+ + G ++K+G+ PDV ++ I+ +C
Sbjct: 508 RVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGM 567
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G + RA + + M ++ P T+ +I+ + M+ +++V+D M GC+P+ T+
Sbjct: 568 GNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTF 627
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
N LI+G + ++M+KA+ +L EM G++ + T+ ++ G+ G A E + +Q
Sbjct: 628 NGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQN 687
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD 464
G D TY +L K A+++ +E+ N+ R+ +Y+I++DG G + +
Sbjct: 688 EGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWE 747
Query: 465 AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
A + ++ +G+K D+ TYT + + G ++ A Q + +ME G PN TY ++
Sbjct: 748 AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIK 807
Query: 525 GLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
G R ++ + MK G D L+
Sbjct: 808 GWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 121/493 (24%), Positives = 215/493 (43%), Gaps = 27/493 (5%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+AA +F++ I+ N + +I + + A +LV+ M GI+A +
Sbjct: 395 AEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHT 454
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+++ ++ G V + + G P +VT ++N G + +AL ++ M E G
Sbjct: 455 MMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG 514
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ N T+ +ING K+ + + A F+ + G K DV +Y I+ + C G ++ A+
Sbjct: 515 VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAI 574
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
EM + L H P TF I+ Y K G + R
Sbjct: 575 QTVKEM----------------QKLRH-----------RPTTRTFMPIIHGYAKSGDMRR 607
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
+ + M R G P V T+N LIN + QM+ A+++ D M G + TY ++
Sbjct: 608 SLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQ 667
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
G+ + KA + N+GL DI T+ AL+ CK+G +A + M
Sbjct: 668 GYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPR 727
Query: 410 DRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFF 469
+ Y I++DG + EA L ++++K + I Y+ + G + A +
Sbjct: 728 NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTI 787
Query: 470 SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
++A G+K ++ TYT +++G R L + A +M+ G P+ Y+ + LL R
Sbjct: 788 EEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSR 847
Query: 530 GDISRSEKYLQLM 542
I+ + Y +M
Sbjct: 848 ASIAEAYIYSGVM 860
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 211/471 (44%), Gaps = 38/471 (8%)
Query: 57 FNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCR 116
F ++ P + + LINL K+ + A+ + + M G++ + T++++IN +
Sbjct: 472 FKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 117 LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
L F V M K G++PD++ I++ C GN+++A+ M ++ +R + T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
II+G K G+ ++ F + G V + +++ L + + +A+ + EMT
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 237 GKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
G+ + HT++ I+ Y G +A
Sbjct: 652 LAGVSANE---------------------------HTYTKIMQGYASVGDTGKAFEYFTR 684
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
+ G++ ++FTY +L+ A C +MQ A+ V M + ++ YN LI GW +
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 744
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+ +A L+ +M +G+ PDI T+ + + KAG A + I M+ G P+ TY
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA-- 474
++ G + +A+S Y E++ M + +Y +L L S + +A +SG+
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAY-IYSGVMTIC 863
Query: 475 -----KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
GL +D+ T + LC+ ++ + L + +K PP+ +++
Sbjct: 864 KEMVEAGLIVDMGTAVHWSKCLCK---IEASGGELTETLQKTFPPDWSSHH 911
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 154/399 (38%), Gaps = 70/399 (17%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
LK A F M P++ + +I+ M + AI VK M L + T
Sbjct: 532 LKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRT 591
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
F +I+ + V +M + G P + T ++NGL + +E+A+ + M
Sbjct: 592 FMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
G N +T+ I+ G VG+T A YF +++ G D+ Y A++ + CK G +
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQ 711
Query: 227 EALGLWSEMTGK-----------------------------------GIQPDVVTYNCLT 251
AL + EM+ + G++P
Sbjct: 712 SALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKP--------- 762
Query: 252 RGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
D+HT+++ + K G + RA + + M +GV+PN+ TY +
Sbjct: 763 ------------------DIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTT 804
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA------MSLLG 365
LI + A+ Y+ M G P Y+ L+ + +A M++
Sbjct: 805 LIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTICK 864
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
EMV GL D+ T A+ C + + EL T+QK
Sbjct: 865 EMVEAGLIVDMGT--AVHWSKCLCKIEASGGELTETLQK 901
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 121/262 (46%), Gaps = 2/262 (0%)
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
+P+ + ++ + + M A + ++ M +G P++ Y +LIH + + MD+A+S
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK-HGQLPDRITYAIILDGL 421
+ +M +G+ + T++ +VGGF KAG AA ++ H L I II
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
C+ A +L RE+E+ +D I IY M+DG K F L+ G V
Sbjct: 426 QTCNM-ERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQL 541
TY ++ + G + A ++ M+E+G N TY++ + G ++ D + + +
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 542 MKGKGFSADATTTELLINFFSG 563
M +G D +I+ F G
Sbjct: 545 MVKEGMKPDVILYNNIISAFCG 566
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/245 (20%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L++ + + + ++ AV+ ++M N +T ++ + A R+ + G
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
++ D FT+ ++ C+ R V M + + +++G G+V +A
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L +M + G + + +T+ + I+ K G+ + A +++E G K ++ YT ++
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGW 809
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVD 279
+ L +AL + EM GI+PD Y+CL L L + + + + +S ++
Sbjct: 810 ARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL--------LSRASIAEAYIYSGVM- 860
Query: 280 NYCKE 284
CKE
Sbjct: 861 TICKE 865
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 96/249 (38%), Positives = 146/249 (58%), Gaps = 9/249 (3%)
Query: 206 KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK---- 261
K DV + TAI+D LCKDG A L++EM KGI P+V+TYNC+ H R
Sbjct: 7 KADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQ 66
Query: 262 ----VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC 317
+++K I PD+ TFSA+++ + KE ++ AE + M R + P TYNS+I+ C
Sbjct: 67 LLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFC 126
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
QD++ DA ++ DSM KGC P VT++TLI+G+CK K++D M + EM +G+ +
Sbjct: 127 KQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV 186
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
T+ L+ GFC+ G AA++L++ M G PD IT+ +L GL +A ++ +L
Sbjct: 187 TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Query: 438 EKMNLDRHI 446
+K D H+
Sbjct: 247 QKSE-DHHL 254
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 139/275 (50%), Gaps = 27/275 (9%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M + ++ D+V T IV+ LC +GN A L M E G N T+ +I+ C G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
S A + + + D+ ++A++++ K+ V+EA ++ EM I P +TYN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN- 119
Query: 250 LTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
+++D +CK+ + A+R++ MA G P+V T+
Sbjct: 120 --------------------------SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTF 153
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
++LIN +C ++ + M+++ M +G + +TVTY TLIHG+C++ +D A LL EM++
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMIS 213
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
G+ PD T++ ++ G C A ++ +QK
Sbjct: 214 CGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 128/246 (52%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
+ I DV +AIVD CK+G A+ L M G+ PNV TYN +I++ C +
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
DA ++ MI K P VT++ LI+ + K +K+ +A + EM+ + P T+N+++
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
GFCK AK ++ +M G PD +T++ +++G K + ++ E+ + +
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+ Y+ ++ G C G L A++ + + + G+ D T+ M+ GLC + L A +
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 504 LMDMEE 509
L D+++
Sbjct: 243 LEDLQK 248
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 117/244 (47%)
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M + ++ +V ++++ C +A ++ M KG P+ +TYN +I +C +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
A LL M+ K + PDI T++AL+ F K A+E+ M + P ITY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++DG K +A + + + +S +++G C R+ + E F + +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
+ + TYT ++ G C+ G LD A+ LL +M G P+ T++ + GL + ++ ++
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAF 240
Query: 537 KYLQ 540
L+
Sbjct: 241 AILE 244
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 103/212 (48%)
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
V ++ CK A +L EM KG+ P++ T+N ++ FC +G A +L+
Sbjct: 11 VISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRH 70
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
M + PD +T++ +++ K EA +Y+E+ + ++ Y+ M+DG C R
Sbjct: 71 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNL 521
+ DA+ + +KG DV T++ ++ G C+ +D+ ++ +M +G N TY
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 522 FVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
+ G + GD+ ++ L M G + D T
Sbjct: 191 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 3/221 (1%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A + F +M FPN+ + +I+ ++ A L++ M I D TF+ +IN
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
+ + + M + + P +T ++++G C + V+ A + M G
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ T +ING CK + F ++ RG + YT ++ C+ G ++ A L
Sbjct: 149 DVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 208
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK-GIMPDVH 272
+EM G+ PD +T++C+ GL CS+ ++ K I+ D+
Sbjct: 209 NEMISCGVAPDYITFHCMLAGL--CSKKELRKAFAILEDLQ 247
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 110/260 (42%), Gaps = 27/260 (10%)
Query: 73 TVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFK 132
T +++ + K ++ A +L MH GI + T+ +I+ C R +L M +
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIE 73
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
+ PDIVT + ++N E V +A + M + T+ ++I+G CK
Sbjct: 74 KQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDD 133
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
A + +G DV ++ +++ CK V+ + ++ EM +GI + VTY L
Sbjct: 134 AKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIH 193
Query: 253 GLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
G +C+ G + A+ L+ M GV P+ T++ +
Sbjct: 194 G---------------------------FCQVGDLDAAQDLLNEMISCGVAPDYITFHCM 226
Query: 313 INAHCLQDQMQDAMKVYDSM 332
+ C + +++ A + + +
Sbjct: 227 LAGLCSKKELRKAFAILEDL 246
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%)
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M + D+ A+V CK G + A+ L + M + G P+ +TY ++D
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+ +A L R + + ++ I +S +++ ++ +A E + + + TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
M+ G C++ +DDA+++L M KGC P+ T++ + G + + + M +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 547 FSADATTTELLINFF 561
A+ T LI+ F
Sbjct: 181 IVANTVTYTTLIHGF 195
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 71/162 (43%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+++ + V A + + +M + FP + +I+ K A ++ M S G
Sbjct: 86 LINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
D TF+ +IN C+ R D G + M + G+ + VT TT+++G C G+++ A
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQ 205
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVE 201
L M G + T ++ GLC A + ++
Sbjct: 206 DLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 247
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 203/429 (47%), Gaps = 16/429 (3%)
Query: 136 EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTH----GAIINGLCKVGNTS 191
E D T I++ LC+ G + A L E+ R N H ++ GL ++
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLV----EVMARHNQVPHFPSCSNLVRGLARIDQLD 156
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A+ + + G D Y I+ +LCK G + AL L +M+ G PDV+TYN +
Sbjct: 157 KAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVI 216
Query: 252 RGLFHCSRGKV--------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
R +F + L+ G P + T++ +V+ C+ ARA ++ MA G
Sbjct: 217 RCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCY 276
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P++ TYNSL+N +C + +++ V ++ G +TVTYNTL+H C + D+ +
Sbjct: 277 PDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEI 336
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
L M P + T+N L+ G CKA + A + M + LPD +TY +L + K
Sbjct: 337 LNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSK 396
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
+A+ L L+ + Y+ ++DGL G +K A E + + G+ D T
Sbjct: 397 EGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDIT 456
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
++ G CR L+++A Q+L + +G TY L +QGL ++ +I + + +++M
Sbjct: 457 RRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIML 516
Query: 544 GKGFSADAT 552
G D T
Sbjct: 517 TGGCKPDET 525
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 182/397 (45%), Gaps = 12/397 (3%)
Query: 114 LCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCN 173
L R+ + D C+L +M G PD +T I+ LC +G++ AL L M G +
Sbjct: 149 LARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPD 208
Query: 174 SYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWS 233
T+ +I + GN AI ++K G + YT +++ +C+ A+ +
Sbjct: 209 VITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLE 268
Query: 234 EMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCK 283
+M +G PD+VTYN L ++C RG +L G+ + T++ ++ + C
Sbjct: 269 DMAVEGCYPDIVTYNSLVN--YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCS 326
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
E ++ M + P V TYN LIN C + A+ + M+ + CLP VT
Sbjct: 327 HEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVT 386
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
YNT++ K +D A+ LLG + N P + T+N+++ G K G+ A EL M
Sbjct: 387 YNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQML 446
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
G PD IT ++ G + + EA + +E + Y +++ GLC ++
Sbjct: 447 DAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIE 506
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
A E + G K D YT +V+G+ G+ +A
Sbjct: 507 MAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 173/366 (47%), Gaps = 9/366 (2%)
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH--------CSR 259
D I+ +LC +G + +A L M P + + L RGL C
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 260 GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQ 319
++ G +PD T++ I+ N CK+G I A L+ M+ G P+V TYN++I
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDY 222
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
+ A++ + + GC P +TY L+ C+ +A+ +L +M +G PDI T+
Sbjct: 223 GNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Query: 380 NALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
N+LV C+ G +I + HG + +TY +L L ++ E + + +
Sbjct: 283 NSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQ 342
Query: 440 MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDD 499
+ + Y+I+++GLC L A +FF + + D+ TY ++ + +EG++DD
Sbjct: 343 TSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD 402
Query: 500 AEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRS-EKYLQLMKGKGFSADATTTELLI 558
A +LL ++ CPP TYN + GL ++G + ++ E Y Q++ F D T L+
Sbjct: 403 AIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIY 462
Query: 559 NFFSGN 564
F N
Sbjct: 463 GFCRAN 468
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 179/405 (44%), Gaps = 8/405 (1%)
Query: 35 PKRRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKR 94
P L+ + + +D A+ M P+ + ++I + K H TA+ L++
Sbjct: 140 PSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLED 199
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN 154
M G D T+ VI C+ + + G P ++T T +V +C
Sbjct: 200 MSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCG 259
Query: 155 VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
+A+ + M G + T+ +++N C+ GN + + G + + Y
Sbjct: 260 SARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNT 319
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC---SRG-----KVLKKG 266
++ SLC +E + + M P V+TYN L GL SR ++L++
Sbjct: 320 LLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQK 379
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
+PD+ T++ ++ KEGM+ A L+G + P + TYNS+I+ + M+ A+
Sbjct: 380 CLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKAL 439
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
++Y M+ G P +T +LI+G+C+ +++A +L E N+G T+ ++ G
Sbjct: 440 ELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGL 499
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV 431
CK A E++ M G PD Y I+ G+ + EAV
Sbjct: 500 CKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 222/479 (46%), Gaps = 30/479 (6%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ V+ A+ K+ FP+ L+ ++++ A V+ M S G ++
Sbjct: 215 RKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVL 274
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
++ I C D G+ +L M G+ PDIV T ++ LC G +++A + ++
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G +S + ++I+G CKVG AI K + + ++ VY++ + ++C G +
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAI---KLIHSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI 287
A ++ E+ G+ PD V Y + ++D YC G
Sbjct: 392 ASTIFQEIFELGLLPDCVCY---------------------------TTMIDGYCNLGRT 424
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
+A + G + + G P++ T LI A + DA V+ +M +G VTYN L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
+HG+ K +++K L+ EM + G++PD+ T+N L+ G A E+IS + + G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
+P + + ++ G K + EA L+ + + + + S +L G C R++ A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
F+ L GLK DV Y ++ G C G ++ A +L+ M ++G PN+ T++ V GL
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 194/430 (45%), Gaps = 43/430 (10%)
Query: 35 PKRRELLSSMRDLKTV---DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISL 91
P R +S ++++ V + A +F M + N ++ I ++ L
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWEL 293
Query: 92 VKRMHSLGIEADSFTFTIVINCLCR----------LSRTDL---------------GFCV 126
+ M GI D FT+ I+ LC+ L + L GFC
Sbjct: 294 LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK 353
Query: 127 LG-------LMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGA 179
+G L+ L P+I ++ ++ +C+ G++ +A + + E+G + +
Sbjct: 354 VGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
+I+G C +G T A YF + G + T ++ + + G +++A ++ M +G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 240 IQPDVVTYNCLTRGLFHCSR-GKVLK-------KGIMPDVHTFSAIVDNYCKEGMIARAE 291
++ DVVTYN L G + KV + GI PDV T++ ++ + G I A
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
++ + R G P+ + +I + Q+A ++ M P VT + L+HG+
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK ++M+KA+ L ++++ GL PD+ +N L+ G+C G A ELI M + G LP+
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Query: 412 ITYAIILDGL 421
T+ ++ GL
Sbjct: 654 STHHALVLGL 663
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 193/474 (40%), Gaps = 50/474 (10%)
Query: 141 TLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKV 200
+ +++ E V AL L ++D+ G + +++ + +V A + + +
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 201 EGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG 260
RG + V + + C DG ++ L M GI+PD+V + L C G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKL--CKAG 320
Query: 261 ------KVLKK----GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
VL K GI D + S+++D +CK G + E + + + PN+F Y+
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVG---KPEEAIKLIHSFRLRPNIFVYS 377
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
S ++ C M A ++ + G LP V Y T+I G+C + + DKA G ++
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
G P + T L+G + G A+ + M+ G D +TY ++ G K H +
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 431 VSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG-------------- 476
L E+ + + Y+I++ + G + +A E S L +G
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 477 ---------------------LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
+K DV T + ++ G C+ ++ A L + + G P+
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNT 569
YN + G GDI ++ + + LM +G + +T L+ G + N+
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNS 671
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 123/479 (25%), Positives = 222/479 (46%), Gaps = 30/479 (6%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ V+ A+ K+ FP+ L+ ++++ A V+ M S G ++
Sbjct: 215 RKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVL 274
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
++ I C D G+ +L M G+ PDIV T ++ LC G +++A + ++
Sbjct: 275 SLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKL 334
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G +S + ++I+G CKVG AI K + + ++ VY++ + ++C G +
Sbjct: 335 FGISQDSVSVSSVIDGFCKVGKPEEAI---KLIHSFRLRPNIFVYSSFLSNICSTGDMLR 391
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI 287
A ++ E+ G+ PD V Y + ++D YC G
Sbjct: 392 ASTIFQEIFELGLLPDCVCY---------------------------TTMIDGYCNLGRT 424
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
+A + G + + G P++ T LI A + DA V+ +M +G VTYN L
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNL 484
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
+HG+ K +++K L+ EM + G++PD+ T+N L+ G A E+IS + + G
Sbjct: 485 MHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGF 544
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
+P + + ++ G K + EA L+ + + + + S +L G C R++ A
Sbjct: 545 VPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIV 604
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
F+ L GLK DV Y ++ G C G ++ A +L+ M ++G PN+ T++ V GL
Sbjct: 605 LFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGL 663
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 194/430 (45%), Gaps = 43/430 (10%)
Query: 35 PKRRELLSSMRDLKTV---DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISL 91
P R +S ++++ V + A +F M + N ++ I ++ L
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWEL 293
Query: 92 VKRMHSLGIEADSFTFTIVINCLCR----------LSRTDL---------------GFCV 126
+ M GI D FT+ I+ LC+ L + L GFC
Sbjct: 294 LMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCK 353
Query: 127 LG-------LMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGA 179
+G L+ L P+I ++ ++ +C+ G++ +A + + E+G + +
Sbjct: 354 VGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
+I+G C +G T A YF + G + T ++ + + G +++A ++ M +G
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEG 473
Query: 240 IQPDVVTYNCLTRGLFHCSR-GKVLK-------KGIMPDVHTFSAIVDNYCKEGMIARAE 291
++ DVVTYN L G + KV + GI PDV T++ ++ + G I A
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
++ + R G P+ + +I + Q+A ++ M P VT + L+HG+
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGY 593
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
CK ++M+KA+ L ++++ GL PD+ +N L+ G+C G A ELI M + G LP+
Sbjct: 594 CKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNE 653
Query: 412 ITYAIILDGL 421
T+ ++ GL
Sbjct: 654 STHHALVLGL 663
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 193/474 (40%), Gaps = 50/474 (10%)
Query: 141 TLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKV 200
+ +++ E V AL L ++D+ G + +++ + +V A + + +
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 201 EGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG 260
RG + V + + C DG ++ L M GI+PD+V + L C G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKL--CKAG 320
Query: 261 ------KVLKK----GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
VL K GI D + S+++D +CK G + E + + + PN+F Y+
Sbjct: 321 FLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVG---KPEEAIKLIHSFRLRPNIFVYS 377
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
S ++ C M A ++ + G LP V Y T+I G+C + + DKA G ++
Sbjct: 378 SFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKS 437
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
G P + T L+G + G A+ + M+ G D +TY ++ G K H +
Sbjct: 438 GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKV 497
Query: 431 VSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG-------------- 476
L E+ + + Y+I++ + G + +A E S L +G
Sbjct: 498 FELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGG 557
Query: 477 ---------------------LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
+K DV T + ++ G C+ ++ A L + + G P+
Sbjct: 558 FSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPD 617
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNT 569
YN + G GDI ++ + + LM +G + +T L+ G + N+
Sbjct: 618 VVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNS 671
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/534 (24%), Positives = 243/534 (45%), Gaps = 57/534 (10%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ + L D A D + ++ +IK L+N + + ++L K++ LG
Sbjct: 152 LVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLG 211
Query: 100 IEADSFTFTIVINCLCRLSRTDL-------------------GFCVLG-----------L 129
+ A+ +T+ IV+ LCR + G CV G L
Sbjct: 212 LCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILEL 271
Query: 130 MFKMGLEPDIV--TLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKV 187
+ + L D + L +V G C E ++ A + + M+E+G+ + Y A+I+ CK
Sbjct: 272 IDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKN 331
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
N A+G+ K+ G+G K + + + I+ CK + EAL + E I D V Y
Sbjct: 332 MNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCY 391
Query: 248 NCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR 299
N L R ++ +GI+PDV ++ ++D YC +G + A L+ M
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK 359
G+ P++ TYN L++ ++ +++Y+ M +G P+ VT + +I G C +K+ +
Sbjct: 452 NGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKE 511
Query: 360 AMSLLGEMVNKGLTPDICTWN--ALVGGFCKAGMPLAAKELISTMQK--HGQLPDRITYA 415
A + K C N + V G+C+AG+ A + ++ + ++ ++
Sbjct: 512 AEDFFSSLEQK------CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFS 565
Query: 416 IILDG-LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
+ ++G L K H + +S YR ++ ++ M+ C +++A+ F +
Sbjct: 566 LCIEGYLEKAHDVLKKMSAYR------VEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVE 619
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLR 528
+GL D+FTYTIM+ CR L AE L DM+++G P+ TY + + L+
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 673
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/472 (23%), Positives = 209/472 (44%), Gaps = 37/472 (7%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A+ F +KM N ++++ KM A+ K + I D + + +
Sbjct: 337 ALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFD 396
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
L +L R + F +L M G+ PD++ TT+++G C +G V AL L M G
Sbjct: 397 ALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSP 456
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ T+ +++GL + G+ + +++++ G K + + I++ LC V EA +
Sbjct: 457 DLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFF 516
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVH--------TFSAIVDNYCKE 284
S + K + +G +C G + KK V + + + C E
Sbjct: 517 SSLEQKCPENKA----SFVKG--YCEAG-LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIE 569
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G + +A ++ M+ VEP +I A C + +++A ++D+M+ +G +P TY
Sbjct: 570 GYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTY 629
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
+IH +C++ ++ KA SL +M +G+ PD+ T+ L+ + K E T
Sbjct: 630 TIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLD-----PEHHETCSV 684
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD 464
G++ R +A + RE + + Y++++D C L+
Sbjct: 685 QGEVGKR-----------------KASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQ 727
Query: 465 AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
A E F + GL+ D+ YT ++ R+G +D A L+ ++ +K P++
Sbjct: 728 AAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSE 779
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 179/423 (42%), Gaps = 55/423 (13%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A++ F + +N F + + V + + K+ A L++ M GI D +T +I+
Sbjct: 372 ALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLID 431
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
C + ++ M G+ PD++T +V+GL G+ E+ L + RM G +
Sbjct: 432 GYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKP 491
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGR----------GF--------------KFD 208
N+ T+ II GLC A +F +E + G+ + +
Sbjct: 492 NAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLE 551
Query: 209 VP----VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQP------DVVTYNCLTRGLFHCS 258
P VY + SLC +G + +A + +M+ ++P ++ C L +
Sbjct: 552 YPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFC---KLNNVR 608
Query: 259 RGKVL-----KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLI 313
+VL ++G++PD+ T++ ++ YC+ + +AE L M + G++P+V TY L+
Sbjct: 609 EAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Query: 314 NAHCLQDQ-------------MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
+ + D + A +V G V Y LI CK+ +++A
Sbjct: 669 DRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQA 728
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
L M++ GL PD+ + L+ + + G A L++ + K +P A +
Sbjct: 729 AELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNIPSESFEAAVKSA 788
Query: 421 LFK 423
K
Sbjct: 789 ALK 791
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 12/304 (3%)
Query: 261 KVLKK-GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE-PNVFTYNSLINAHCL 318
K LK+ G+ + +T++ +V C++G + A L+ +E +VF Y + IN C+
Sbjct: 205 KQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL-------IENESVFGYKTFINGLCV 257
Query: 319 QDQMQDAMKVYDSMIYKGCLPS---TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
+ + A+ + +I + L ++ G+C KM A S++ EM G D
Sbjct: 258 TGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLD 317
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
+ A++ +CK A + M G + + ++IL K EA+ ++
Sbjct: 318 VYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFK 377
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
E MN+ Y++ D L GR+++A E ++ +G+ DV YT ++ G C +G
Sbjct: 378 EFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQG 437
Query: 496 LLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTE 555
+ DA L+ +M G P+ TYN+ V GL R G + + MK +G +A T
Sbjct: 438 KVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNS 497
Query: 556 LLIN 559
++I
Sbjct: 498 VIIE 501
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 135/299 (45%), Gaps = 11/299 (3%)
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA-MKV 328
D+ + +++ + G I L + ++G+ N +TY ++ A C + +++A M +
Sbjct: 180 DIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLL 239
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN-KGLTPD--ICTWNALVGG 385
++ S Y T I+G C + +KA++L+ E+++ K L D +V G
Sbjct: 240 IEN-------ESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRG 292
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
FC AA+ +I M++ G D ++D K PEA+ ++ L +
Sbjct: 293 FCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVN 352
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
I S++L C +A E F + + +D Y + L + G +++A +LL
Sbjct: 353 CVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQ 412
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
+M+++G P+ Y + G +G + + + M G G S D T +L++ + N
Sbjct: 413 EMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARN 471
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 123/490 (25%), Positives = 226/490 (46%), Gaps = 33/490 (6%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN+ I++ V+ A+ ++RM +GI + T+ +I C L R + +
Sbjct: 275 PNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIEL 334
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM-DEMGYRCNSYTHGAIINGLC 185
L M G PD V+ TI+ LC E + + L +M E G + T+ +I+ L
Sbjct: 335 LEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLT 394
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
K + A+ + K + +GF+ D Y+AI+ +LCK+G ++EA L +EM KG
Sbjct: 395 KHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKG------ 448
Query: 246 TYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
HC PDV T++A+V+ +C+ G + +A++L+ M G +PN
Sbjct: 449 ----------HCP----------PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPN 488
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
+Y +L+N C + +A ++ + P+++TY+ ++HG + K+ +A ++
Sbjct: 489 TVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVR 548
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
EMV KG P N L+ C+ G A++ + G + + + ++ G +
Sbjct: 549 EMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQND 608
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
A+S+ ++ +N + Y+ ++D L GR+ +A E + KG+ TY
Sbjct: 609 ELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYR 668
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC--TYNLFVQGLLRRGDISRSEKYLQLMK 543
++ C+ G +DD L+ + EK C YN ++ L G + ++ L +
Sbjct: 669 TVIHRYCQMGKVDD----LVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVL 724
Query: 544 GKGFSADATT 553
+DA T
Sbjct: 725 RTASRSDAKT 734
Score = 172 bits (435), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 133/513 (25%), Positives = 238/513 (46%), Gaps = 24/513 (4%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A+ F +M + PN+ + +I + AI L++ MHS G D ++
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 110 VINCLCRLSRTDLGFCVLGLMFKM----GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
++ LC+ R V LM KM GL PD VT T+++ L + ++AL
Sbjct: 353 IMGYLCKEKRI---VEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDA 409
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGF-KFDVPVYTAIMDSLCKDGL 224
E G+R + + AI++ LCK G S A ++ +G DV YTA+++ C+ G
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM----------PDVHTF 274
V++A L M G +P+ V+Y L G+ C GK L+ M P+ T+
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGM--CRTGKSLEAREMMNMSEEHWWSPNSITY 527
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
S I+ +EG ++ A ++ M G P N L+ + C + +A K + +
Sbjct: 528 SVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLN 587
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
KGC + V + T+IHG+C+ ++D A+S+L +M D+ T+ LV K G
Sbjct: 588 KGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAE 647
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM-NLDRHITIYSIML 453
A EL+ M G P +TY ++ + + V++ LEKM + + TIY+ ++
Sbjct: 648 ATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAI---LEKMISRQKCRTIYNQVI 704
Query: 454 DGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCP 513
+ LC G+L++A + + D T +++G ++G+ A ++ M +
Sbjct: 705 EKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLI 764
Query: 514 PNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
P+ + L+ +G + ++K + + +G
Sbjct: 765 PDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 211/479 (44%), Gaps = 49/479 (10%)
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN 154
M GI F+ V+ R + VL LM + G+EP+++ T ++
Sbjct: 233 MKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANR 292
Query: 155 VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
+E+AL RM +G N T+ +I G C +
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR------------------------- 327
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL----------- 263
V EA+ L +M KG PD V+Y + L C +++
Sbjct: 328 ----------VEEAIELLEDMHSKGCLPDKVSYYTIMGYL--CKEKRIVEVRDLMKKMAK 375
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
+ G++PD T++ ++ K A + G + Y+++++A C + +M
Sbjct: 376 EHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMS 435
Query: 324 DAMKVYDSMIYKG-CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
+A + + M+ KG C P VTY +++G+C++ ++DKA LL M G P+ ++ AL
Sbjct: 436 EAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTAL 495
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
+ G C+ G L A+E+++ ++H P+ ITY++I+ GL + EA + RE+
Sbjct: 496 LNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGF 555
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
+++L LC GR +AR+F KG I+V +T ++ G C+ LD A
Sbjct: 556 FPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALS 615
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+L DM + TY V L ++G I+ + + ++ M KG T +I+ +
Sbjct: 616 VLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRY 674
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 176/391 (45%), Gaps = 49/391 (12%)
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
+ G A+ ++ G + ++ + +D + + +AL M GI P+VV
Sbjct: 254 RAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVV 313
Query: 246 TYNCLTRGLFHCSRGKVLK----------KGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
TYNC+ RG +C +V + KG +PD ++ I+ CKE I LM
Sbjct: 314 TYNCMIRG--YCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371
Query: 296 FMARV-GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
MA+ G+ P+ TYN+LI+ D +A+ KG + Y+ ++H CK
Sbjct: 372 KMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKE 431
Query: 355 KKMDKAMSLLGEMVNKG-LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRIT 413
+M +A L+ EM++KG PD+ T+ A+V GFC+ G AK+L+ M HG P+ ++
Sbjct: 432 GRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVS 491
Query: 414 YAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
Y + +L+G+C G+ +ARE + +
Sbjct: 492 Y-----------------------------------TALLNGMCRTGKSLEAREMMNMSE 516
Query: 474 AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDIS 533
+ TY++++ GL REG L +A ++ +M KG P NL +Q L R G
Sbjct: 517 EHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTH 576
Query: 534 RSEKYLQLMKGKGFSADATTTELLINFFSGN 564
+ K+++ KG + + +I+ F N
Sbjct: 577 EARKFMEECLNKGCAINVVNFTTVIHGFCQN 607
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 146/292 (50%), Gaps = 2/292 (0%)
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
D + ++++ K + + R++ M R G+ ++ ++ ++ Q++DA+KV
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
M G P+ + NT I + + +++KA+ L M G+ P++ T+N ++ G+C
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN-LDRHITI 448
A EL+ M G LPD+++Y I+ L K E L +++ K + L
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
Y+ ++ L + +A F Q KG +ID Y+ +V LC+EG + +A+ L+ +M
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445
Query: 509 EKG-CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
KG CPP+ TY V G R G++ +++K LQ+M G + + L+N
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 118/297 (39%), Gaps = 29/297 (9%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++ +R + A D +M FP E +L+ + + A ++ + G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ FT VI+ C+ D VL M+ + D+ T TT+V+ L +G + +A
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEAT 649
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L +M G T+ +I+ C++G + +K+ R + +Y +++ L
Sbjct: 650 ELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKL 707
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVD 279
C G + EA L GKVL+ D T A+++
Sbjct: 708 CVLGKLEEADTLL---------------------------GKVLRTASRSDAKTCYALME 740
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
Y K+G+ A ++ M + P+V L L+ ++ +A K+ ++ +G
Sbjct: 741 GYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERG 797
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 207/455 (45%), Gaps = 25/455 (5%)
Query: 75 LINLVVKMKHYTTAISLVKRM------------HSL--GIEAD----SFTFTIVINCLCR 116
+I ++ K KH+ TA L+ ++ SL G+ D S F+ ++ +
Sbjct: 86 MILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAK 145
Query: 117 LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
+ V + GL+P + T ++N L + + + +M ++G N +
Sbjct: 146 AGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHV 205
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
+ +++ K G+ A ++E +G D+ Y ++ CK + EAL + M
Sbjct: 206 YNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRME 265
Query: 237 GKGIQPDVVTYNCLTRGLFHCSRGKV-------LKKGIMPDVHTFSAIVDNYCKEGMIAR 289
G+ P++VTYN G R + +K + + T++ ++D YC+ I
Sbjct: 266 RSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDE 325
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
A RL M G P V TYNS++ C ++++A ++ M K P +T NTLI+
Sbjct: 326 ALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLIN 385
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
+CKI+ M A+ + +M+ GL D+ ++ AL+ GFCK AKE + +M + G P
Sbjct: 386 AYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Query: 410 DRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFF 469
TY+ ++DG + + E L E EK L + +Y ++ +C ++ A+ F
Sbjct: 446 GYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLF 505
Query: 470 SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
++ KGL D +T M R G + +A L
Sbjct: 506 ESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALF 540
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 200/435 (45%), Gaps = 28/435 (6%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ ++ F ++ + P+++ TVL+N +VK + T + K+M LG+ A+ + +
Sbjct: 149 INDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNV 208
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+++ + + +L M + G+ PDI T T+++ C + +AL + RM+ G
Sbjct: 209 LVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSG 268
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
N T+ + I+G + G A F++++ V YT ++D C+ ++EAL
Sbjct: 269 VAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDIDEAL 327
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
L M +G P VVTYN + R L C++G I
Sbjct: 328 RLREVMESRGFSPGVVTYNSILRKL---------------------------CEDGRIRE 360
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
A RL+ M+ +EP+ T N+LINA+C + M A+KV MI G +Y LIH
Sbjct: 361 ANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIH 420
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
G+CK+ +++ A L M+ KG +P T++ LV GF +L+ +K G
Sbjct: 421 GFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCA 480
Query: 410 DRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFF 469
D Y ++ + K A L+ +EK L I++ M G++ +A F
Sbjct: 481 DVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALF 540
Query: 470 SGLQAKGLKIDVFTY 484
+ + L +++ Y
Sbjct: 541 DVMYNRRLMVNLKLY 555
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 183/378 (48%), Gaps = 15/378 (3%)
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
K G + +I F+++ G K + T +++SL K L + ++ +M G+ ++
Sbjct: 144 AKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANI 203
Query: 245 VTYNCLTRGLFHCSRG-------KVL----KKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
YN L CS+ K+L +KG+ PD+ T++ ++ YCK+ M A +
Sbjct: 204 HVYNVLVHA---CSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSV 260
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
M R GV PN+ TYNS I+ + +M++A +++ I + VTY TLI G+C+
Sbjct: 261 QDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTLIDGYCR 319
Query: 354 IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRIT 413
+ +D+A+ L M ++G +P + T+N+++ C+ G A L++ M PD IT
Sbjct: 320 MNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNIT 379
Query: 414 YAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
+++ K AV + +++ + L + Y ++ G C L++A+E +
Sbjct: 380 CNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMI 439
Query: 474 AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDIS 533
KG TY+ +V G + D+ +LL + E++G + Y ++ + + +
Sbjct: 440 EKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVD 499
Query: 534 RSEKYLQLMKGKGFSADA 551
++ + M+ KG D+
Sbjct: 500 YAKVLFESMEKKGLVGDS 517
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 174/356 (48%), Gaps = 9/356 (2%)
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV----VTYNCLTRGLFHCSRGKVLKK- 265
V++ +M K G++N+++ ++ ++ G++P + V N L + + K+ KK
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 266 ---GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
G++ ++H ++ +V K G +AE+L+ M GV P++FTYN+LI+ +C +
Sbjct: 195 VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMH 254
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
+A+ V D M G P+ VTYN+ IHG+ + +M +A L E + +T + T+ L
Sbjct: 255 FEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVTYTTL 313
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
+ G+C+ A L M+ G P +TY IL L + EA L E+ +
Sbjct: 314 IDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKI 373
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
+ + +++ C + A + + GLK+D+++Y ++ G C+ L++A++
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
L M EKG P TY+ V G + K L+ + +G AD LI
Sbjct: 434 ELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 95/391 (24%), Positives = 170/391 (43%), Gaps = 44/391 (11%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LL+S+ + D F KM + NI + VL++ K A L+ M G
Sbjct: 174 LLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKG 233
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ D FT+ +I+ C+ S V M + G+ P+IVT + ++G EG + +A
Sbjct: 234 VFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT 293
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L + + N T+ +I+G C++ + A+ + +E RGF V Y +I+ L
Sbjct: 294 RLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT---------------------------- 251
C+DG + EA L +EM+GK I+PD +T N L
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 252 ---RGLFH-------CSRGK-----VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
+ L H K +++KG P T+S +VD + + +L+
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEE 472
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
+ G+ +V Y LI C +Q+ A +++SM KG + +V + T+ + + + K
Sbjct: 473 FEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+ +A +L M N+ L ++ + ++ +
Sbjct: 533 VTEASALFDVMYNRRLMVNLKLYKSISASYA 563
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 109/266 (40%), Gaps = 26/266 (9%)
Query: 329 YDSMIYKGCLPSTVTYNTLIHGW------CKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
+ I+ LPS+ ++L W K K A LL ++ + L +L
Sbjct: 64 WSFFIWTDSLPSS--KHSLQSSWKMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSL 121
Query: 383 VGG------------------FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
VGG + KAGM + + ++ G P ++L+ L K
Sbjct: 122 VGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQ 181
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
+++++ K+ + +I +Y++++ G + A + S ++ KG+ D+FTY
Sbjct: 182 RLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTY 241
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKG 544
++ C++ + +A + ME G PN TYN F+ G R G + + + + +K
Sbjct: 242 NTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD 301
Query: 545 KGFSADATTTELLINFFSGNKADNTF 570
+ T T L+ + N D
Sbjct: 302 DVTANHVTYTTLIDGYCRMNDIDEAL 327
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 126/533 (23%), Positives = 242/533 (45%), Gaps = 27/533 (5%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V +A + FN + ++ +T LI+ Y A+++ K+M G + T+ +
Sbjct: 189 VSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNV 248
Query: 110 VINCLCRLSRTDLGFCVLGLMFKM---GLEPDIVTLTTIVNGLCAEGNVEQ-ALGLAMRM 165
++N ++ + L+ KM G+ PD T T++ C G++ Q A + M
Sbjct: 249 ILNVFGKMGTP--WNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQEAAQVFEEM 305
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
G+ + T+ A+++ K A+ ++ GF + Y +++ + +DG++
Sbjct: 306 KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGML 365
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAI 277
+EA+ L ++M KG +PDV TY L G + ++ G P++ TF+A
Sbjct: 366 DEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAF 425
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
+ Y G ++ + G+ P++ T+N+L+ + V+ M G
Sbjct: 426 IKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGF 485
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
+P T+NTLI + + ++AM++ M++ G+TPD+ T+N ++ + GM +++
Sbjct: 486 VPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEK 545
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYP--EAVSLYRELEKMNLDRHITIYSIMLDG 455
+++ M+ P+ +TY +L H Y + + L L + I +++L
Sbjct: 546 VLAEMEDGRCKPNELTYCSLL------HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 456 L---CSY-GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
L CS L +A FS L+ +G D+ T MV R ++ A +L M+E+G
Sbjct: 600 LVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERG 659
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
P+ TYN + R D +SE+ L+ + KG D + +I + N
Sbjct: 660 FTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRN 712
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/580 (22%), Positives = 245/580 (42%), Gaps = 89/580 (15%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKM-KHYTTAISLVKRMHSL 98
L+S+ + AV+ F KM P + + V++N+ KM + SLV++M S
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 99 GIEADSFTFTIVINCLCRLS-----------------------------------RTDLG 123
GI D++T+ +I C R S R
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 124 FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIING 183
VL M G P IVT ++++ +G +++A+ L +M E G + + +T+ +++G
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 184 LCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
+ G +A+ F+++ G K ++ + A + G E + ++ E+ G+ PD
Sbjct: 394 FERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPD 453
Query: 244 VVTYNCL------------TRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
+VT+N L G+F ++ + G +P+ TF+ ++ Y + G +A
Sbjct: 454 IVTWNTLLAVFGQNGMDSEVSGVFK----EMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
+ M GV P++ TYN+++ A + + KV M C P+ +TY +L+H +
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAY 569
Query: 352 CKIKK-----------------------------------MDKAMSLLGEMVNKGLTPDI 376
K+ + +A E+ +G +PDI
Sbjct: 570 ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDI 629
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
T N++V + + M A ++ M++ G P TY ++ + + ++ + RE
Sbjct: 630 TTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILRE 689
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
+ + I Y+ ++ C R++DA FS ++ G+ DV TY + + +
Sbjct: 690 ILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSM 749
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGL--LRRGDISR 534
++A ++ M + GC PN TYN V G L R D ++
Sbjct: 750 FEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAK 789
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 205/469 (43%), Gaps = 65/469 (13%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A D+F K + ++I+++ K ++A ++ + G D +++T +I+
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLIS 216
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL-GLAMRMDEMGYR 171
R V M + G +P ++T I+N G + L +M G
Sbjct: 217 AFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA 276
Query: 172 CNSYTHGAIINGLCKVGN-TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
++YT+ +I CK G+ A F++++ GF +D Y A++D K EA+
Sbjct: 277 PDAYTYNTLIT-CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMK 335
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
+ +EM G P +VTYN L + Y ++GM+ A
Sbjct: 336 VLNEMVLNGFSPSIVTYNSL---------------------------ISAYARDGMLDEA 368
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
L MA G +P+VFTY +L++ +++ AM +++ M GC P+ T+N I
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
+ K + M + E+ GL+PDI TWN L+ F + GM + M++ G +P+
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
R T+ ++ +C + +A+++YR MLD
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRR---------------MLDA--------------- 518
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
G+ D+ TY ++ L R G+ + +E++L +ME+ C PN+ TY
Sbjct: 519 -----GVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 194/439 (44%), Gaps = 45/439 (10%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A++ N+MA P++ +T L++ + +A+S+ + M + G + + TF
Sbjct: 365 LDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNA 424
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
I + + + GL PDIVT T++ G + G+ M G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ T +I+ + G+ A+ ++++ G D+ Y ++ +L + G+ ++
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 230 GLWSEMTGKGIQPDVVTYNCLTR--------GLFH------------------------C 257
+ +EM +P+ +TY L GL H C
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 258 SRGKVL-----------KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
S+ +L ++G PD+ T +++V Y + M+A+A ++ +M G P++
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
TYNSL+ H + ++ ++ KG P ++YNT+I+ +C+ +M A + E
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M N G+ PD+ T+N +G + M A ++ M KHG P++ TY I+DG K +
Sbjct: 725 MRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNR 784
Query: 427 YPEAVSLYRELEKMNLDRH 445
EA +L NLD H
Sbjct: 785 KDEAKLFVEDLR--NLDPH 801
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 145/302 (48%), Gaps = 1/302 (0%)
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
M D + I+ KEG ++ A + + G +V++Y SLI+A + ++A+
Sbjct: 170 MLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVN 229
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKI-KKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
V+ M GC P+ +TYN +++ + K+ +K SL+ +M + G+ PD T+N L+
Sbjct: 230 VFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCC 289
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
+ + A ++ M+ G D++TY +LD K H EA+ + E+ I
Sbjct: 290 KRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSI 349
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
Y+ ++ G L +A E + + KG K DVFTYT ++ G R G ++ A + +
Sbjct: 350 VTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEE 409
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKA 566
M GC PN CT+N F++ RG + K + G S D T L+ F N
Sbjct: 410 MRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGM 469
Query: 567 DN 568
D+
Sbjct: 470 DS 471
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 151/371 (40%), Gaps = 28/371 (7%)
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
A +F K + D V I+ L K+G V+ A +++ G+Q D
Sbjct: 157 AFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFN-----GLQED--------- 202
Query: 253 GLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
G DV+++++++ + G A + M G +P + TYN +
Sbjct: 203 -------------GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVI 249
Query: 313 INAHC-LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
+N + + + M G P TYNTLI + +A + EM G
Sbjct: 250 LNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAG 309
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV 431
+ D T+NAL+ + K+ P A ++++ M +G P +TY ++ + EA+
Sbjct: 310 FSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAM 369
Query: 432 SLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGL 491
L ++ + + Y+ +L G G+++ A F ++ G K ++ T+ ++
Sbjct: 370 ELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMY 429
Query: 492 CREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADA 551
G + ++ ++ G P+ T+N + + G S + MK GF +
Sbjct: 430 GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPER 489
Query: 552 TTTELLINFFS 562
T LI+ +S
Sbjct: 490 ETFNTLISAYS 500
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 231/509 (45%), Gaps = 16/509 (3%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
VD A F +M + P+ + + LIN + + A++L+ M I T+
Sbjct: 159 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 218
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+IN V M G+ PD+VT +++ + +AL M
Sbjct: 219 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 278
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYF-----KKVEGRGFKFDVPVYTAIMDSLCKDGL 224
R ++ T II L K+G +S A+ F K+ E R DV +T+IM G
Sbjct: 279 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP---DVVTFTSIMHLYSVKGE 335
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLT--------RGLFHCSRGKVLKKGIMPDVHTFSA 276
+ ++ M +G++P++V+YN L G G + + GI+PDV +++
Sbjct: 336 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
++++Y + +A+ + M + +PNV TYN+LI+A+ + +A++++ M G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
P+ V+ TL+ + KK ++L ++G+ + +N+ +G + A A
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
L +M+K D +T+ I++ G + YPEA+S +E+E +++ +YS +L
Sbjct: 516 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
G++ +A F+ ++ G + DV YT M+ A +L ++ME G P+
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 635
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
+ ++ + G S + LM+ K
Sbjct: 636 IACSALMRAFNKGGQPSNVFVLMDLMREK 664
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 177/379 (46%), Gaps = 14/379 (3%)
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN---- 248
A G F +++ K D Y A++++ + G A+ L +M I P TYN
Sbjct: 162 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 221
Query: 249 -CLTRGLFHCSR---GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
C + G + + K+ G+ PD+ T + ++ Y ++A M V P
Sbjct: 222 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 281
Query: 305 NVFTYNSLINAHCLQD--QMQDAMKVYDSMIYK--GCLPSTVTYNTLIHGWCKIKKMDKA 360
+ T+N +I +CL Q A+ +++SM K C P VT+ +++H + +++
Sbjct: 282 DTTTFNIII--YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENC 339
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
++ MV +GL P+I ++NAL+G + GM A ++ ++++G +PD ++Y +L+
Sbjct: 340 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 399
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
+ +A ++ + K ++ Y+ ++D S G L +A E F ++ G+K +
Sbjct: 400 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 459
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
V + ++ R + + +L + +G N YN + + ++ ++ Q
Sbjct: 460 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 541 LMKGKGFSADATTTELLIN 559
M+ K AD+ T +LI+
Sbjct: 520 SMRKKKVKADSVTFTILIS 538
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 167/388 (43%), Gaps = 31/388 (7%)
Query: 196 YFKKVEGRGFKFDVPVYTAIMDSLCK-------DGLVNEALG---------LWSEMTGKG 239
Y +VE F+ D V + ++D L DG++N +G L E++ +G
Sbjct: 63 YRIRVENDRFQKDWSV-SEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRG 121
Query: 240 -IQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA 298
I+ V + + +C+R + ++ ++ + + + +A L M
Sbjct: 122 CIELCVNVFKWMKIQKNYCARNDI-----------YNMMIRLHARHNWVDQARGLFFEMQ 170
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
+ +P+ TY++LINAH Q + AM + D M+ PS TYN LI+
Sbjct: 171 KWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWR 230
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
+A+ + +M + G+ PD+ T N ++ + A M+ PD T+ II+
Sbjct: 231 EALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIII 290
Query: 419 DGLFKCHFYPEAVSLYRELEKMNLD--RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
L K +A+ L+ + + + + ++ ++ G +++ R F + A+G
Sbjct: 291 YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEG 350
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
LK ++ +Y ++ G+ A +L D+++ G P+ +Y + R +++
Sbjct: 351 LKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAK 410
Query: 537 KYLQLMKGKGFSADATTTELLINFFSGN 564
+ +M+ + + T LI+ + N
Sbjct: 411 EVFLMMRKERRKPNVVTYNALIDAYGSN 438
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/553 (22%), Positives = 234/553 (42%), Gaps = 44/553 (7%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKM-KHYTTAISLVKRMHSLGIEADSFTFTI 109
+ A+D F +M + P P + + V++++ KM + + + ++ M S G++ D FT +
Sbjct: 227 EKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCST 286
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
V++ R + G EP VT ++ G +AL + M+E
Sbjct: 287 VLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENS 346
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+S T+ ++ + G + A G + + +G + YT ++D+ K G +EAL
Sbjct: 347 CPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEAL 406
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK--------GIMPDVHTFSAIVDNY 281
L+ M G P+ TYN + L SR + K G P+ T++ ++
Sbjct: 407 KLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALC 466
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
+GM R+ M G EP+ T+N+LI+A+ DA K+Y M G
Sbjct: 467 GNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACV 526
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG----------- 390
TYN L++ + +++ +M +KG P +++ ++ + K G
Sbjct: 527 TTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENR 586
Query: 391 -----------------------MPLAAKELISTM-QKHGQLPDRITYAIILDGLFKCHF 426
LA E T+ +KHG PD + + +L + +
Sbjct: 587 IKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNM 646
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
Y +A + + + L + Y+ ++D G A E L+ LK D+ +Y
Sbjct: 647 YDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNT 706
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
+++G CR GL+ +A ++L +M E+G P TYN FV G G + E ++ M
Sbjct: 707 VIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKND 766
Query: 547 FSADATTTELLIN 559
+ T +++++
Sbjct: 767 CRPNELTFKMVVD 779
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/508 (24%), Positives = 238/508 (46%), Gaps = 16/508 (3%)
Query: 73 TVLINLVVKMK---HYTTAISLVKRM----HSLGIEADSFTFTIVINCLCRLSRTDLGFC 125
T L++LV + H+ A+ L + + +S ++ D I + L R S+ +
Sbjct: 137 TDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAK 196
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
+L + D+ TTI++ G E+A+ L RM EMG T+ I++
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG 256
Query: 186 KVGNTSAAI-GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
K+G + I G ++ +G KFD + ++ + ++GL+ EA ++E+ G +P
Sbjct: 257 KMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGT 316
Query: 245 VTYNCLTR-----GLF--HCSRGKVLKKGIMP-DVHTFSAIVDNYCKEGMIARAERLMGF 296
VTYN L + G++ S K +++ P D T++ +V Y + G A ++
Sbjct: 317 VTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEM 376
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M + GV PN TY ++I+A+ + +A+K++ SM GC+P+T TYN ++ K +
Sbjct: 377 MTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSR 436
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
++ + +L +M + G +P+ TWN ++ GM + M+ G PDR T+
Sbjct: 437 SNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNT 496
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++ +C +A +Y E+ + + +T Y+ +L+ L G + S +++KG
Sbjct: 497 LISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKG 556
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
K +Y++M+Q + G E++ ++E P+ + + ++ SE
Sbjct: 557 FKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSE 616
Query: 537 KYLQLMKGKGFSADATTTELLINFFSGN 564
+ L K G+ D +++ F+ N
Sbjct: 617 RAFTLFKKHGYKPDMVIFNSMLSIFTRN 644
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 122/533 (22%), Positives = 228/533 (42%), Gaps = 46/533 (8%)
Query: 74 VLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKM 133
+ + ++ + Y+ A L+ ++ D +T +++ R + + + M +M
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 134 GLEPDIVTLTTIVNGLCAEG-NVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
G P +VT I++ G + + LG+ M G + + +T +++ + G
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT- 251
A +F +++ G++ Y A++ K G+ EAL + EM D VTYN L
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 252 ---RGLFHCSRGKVL----KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
R F V+ KKG+MP+ T++ ++D Y K G A +L M G P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS-L 363
N TYN++++ + + + +K+ M GC P+ T+NT++ C K MDK ++ +
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRV 478
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
EM + G PD T+N L+ + + G + A ++ M + G TY +L+ L +
Sbjct: 479 FREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALAR 538
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG----------RLKDAREF----- 468
+ ++ +++ T YS+ML G R+K+ + F
Sbjct: 539 KGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWML 598
Query: 469 --------------------FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
F+ + G K D+ + M+ R + D AE +L +
Sbjct: 599 LRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIR 658
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
E G P+ TYN + +RRG+ ++E+ L+ ++ D + +I F
Sbjct: 659 EDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 107/499 (21%), Positives = 203/499 (40%), Gaps = 78/499 (15%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A +FF ++ + P + L+ + K YT A+S++K M ADS T+ ++
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
R + V+ +M K G+ P+ +T TT+++ G ++AL L M E G
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 173 NSYTHGAIINGLCKVGNTSAAIG-----------------------------------YF 197
N+ T+ A+++ L K ++ I F
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVF 479
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC 257
++++ GF+ D + ++ + + G +A ++ EMT G V TYN L L
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 258 SRGK--------VLKKGIMPDVHTFSAI---------------VDNYCKEGMI------- 287
+ + KG P ++S + ++N KEG I
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLL 599
Query: 288 -------------ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
A +ER + G +P++ +NS+++ + A + +S+
Sbjct: 600 RTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRE 659
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
G P VTYN+L+ + + + KA +L + L PD+ ++N ++ GFC+ G+
Sbjct: 660 DGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A ++S M + G P TY + G + E + + K + + + +++D
Sbjct: 720 AVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Query: 455 GLCSYGRLKDAREFFSGLQ 473
G C G+ +A +F S ++
Sbjct: 780 GYCRAGKYSEAMDFVSKIK 798
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 186/419 (44%), Gaps = 45/419 (10%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN +T +I+ K A+ L M G ++ T+ V++ L + SR++ +
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR-MDEMGYRCNSYTHGAIINGLC 185
L M G P+ T T++ LC +++ + R M G+ + T +I+
Sbjct: 444 LCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
+ G+ A + ++ GF V Y A++++L + G + S+M KG +P
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 246 TYN----CLTRG-------------------------------LFHC------SRGKVL- 263
+Y+ C +G F C R L
Sbjct: 563 SYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF 622
Query: 264 -KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
K G PD+ F++++ + + M +AE ++ + G+ P++ TYNSL++ + + +
Sbjct: 623 KKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGEC 682
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
A ++ ++ P V+YNT+I G+C+ M +A+ +L EM +G+ P I T+N
Sbjct: 683 WKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTF 742
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
V G+ GM +++I M K+ P+ +T+ +++DG + Y EA+ +++ +
Sbjct: 743 VSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFD 801
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 95/251 (37%), Gaps = 1/251 (0%)
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
+ Q A K+ D + + L Y T++H + + K +KA+ L M G +P + T
Sbjct: 188 ESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVT 247
Query: 379 WNALVGGFCKAGMPLAA-KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
+N ++ F K G ++ M+ G D T + +L + EA + EL
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLL 497
+ + Y+ +L G +A ++ D TY +V R G
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367
Query: 498 DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
+A ++ M +KG PN TY + + G + K MK G + T +
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 558 INFFSGNKADN 568
++ N
Sbjct: 428 LSLLGKKSRSN 438
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 231/509 (45%), Gaps = 16/509 (3%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
VD A F +M + P+ + + LIN + + A++L+ M I T+
Sbjct: 27 VDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNN 86
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+IN V M G+ PD+VT +++ + +AL M
Sbjct: 87 LINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK 146
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYF-----KKVEGRGFKFDVPVYTAIMDSLCKDGL 224
R ++ T II L K+G +S A+ F K+ E R DV +T+IM G
Sbjct: 147 VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP---DVVTFTSIMHLYSVKGE 203
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLT--------RGLFHCSRGKVLKKGIMPDVHTFSA 276
+ ++ M +G++P++V+YN L G G + + GI+PDV +++
Sbjct: 204 IENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 263
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
++++Y + +A+ + M + +PNV TYN+LI+A+ + +A++++ M G
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
P+ V+ TL+ + KK ++L ++G+ + +N+ +G + A A
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
L +M+K D +T+ I++ G + YPEA+S +E+E +++ +YS +L
Sbjct: 384 ALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
G++ +A F+ ++ G + DV YT M+ A +L ++ME G P+
Sbjct: 444 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDS 503
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
+ ++ + G S + LM+ K
Sbjct: 504 IACSALMRAFNKGGQPSNVFVLMDLMREK 532
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 177/379 (46%), Gaps = 14/379 (3%)
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN---- 248
A G F +++ K D Y A++++ + G A+ L +M I P TYN
Sbjct: 30 ARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLIN 89
Query: 249 -CLTRGLFHCSR---GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
C + G + + K+ G+ PD+ T + ++ Y ++A M V P
Sbjct: 90 ACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRP 149
Query: 305 NVFTYNSLINAHCLQD--QMQDAMKVYDSMIYK--GCLPSTVTYNTLIHGWCKIKKMDKA 360
+ T+N +I +CL Q A+ +++SM K C P VT+ +++H + +++
Sbjct: 150 DTTTFNIII--YCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENC 207
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
++ MV +GL P+I ++NAL+G + GM A ++ ++++G +PD ++Y +L+
Sbjct: 208 RAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNS 267
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
+ +A ++ + K ++ Y+ ++D S G L +A E F ++ G+K +
Sbjct: 268 YGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPN 327
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
V + ++ R + + +L + +G N YN + + ++ ++ Q
Sbjct: 328 VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 541 LMKGKGFSADATTTELLIN 559
M+ K AD+ T +LI+
Sbjct: 388 SMRKKKVKADSVTFTILIS 406
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/293 (21%), Positives = 131/293 (44%), Gaps = 2/293 (0%)
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
++ ++ + + + +A L M + +P+ TY++LINAH Q + AM + D M+
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
PS TYN LI+ +A+ + +M + G+ PD+ T N ++ +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 394 AAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD--RHITIYSI 451
A M+ PD T+ II+ L K +A+ L+ + + + + ++
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
++ G +++ R F + A+GLK ++ +Y ++ G+ A +L D+++ G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
P+ +Y + R ++++ +M+ + + T LI+ + N
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSN 306
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/537 (21%), Positives = 227/537 (42%), Gaps = 37/537 (6%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++ R + AVD FNKM N + ++ +M +++ A L K
Sbjct: 332 IIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETN 391
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
I D + + + L +L + + + M G+ PD++ TT++ G C +G A
Sbjct: 392 ISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAF 451
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L + MD G + + + GL G A K +E RG K + +++ L
Sbjct: 452 DLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGL 511
Query: 220 CKDGLVNEALGLWSEMTGKGIQPD--VVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAI 277
G +++A + + K + D +V C L H + + +P F+
Sbjct: 512 IDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLF 571
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
++ I++A+ L+ M ++GVEP Y LI A C + ++ A + ++ ++ K
Sbjct: 572 TSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKI 631
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL--------------- 382
+P TY +I+ +C++ + +A +L +M + + PD+ T++ L
Sbjct: 632 VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEA 691
Query: 383 -------------VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
+ +C L M++ +PD +TY ++L PE
Sbjct: 692 FDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN------KPE 745
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
+L RE++ ++ + Y++++D C G L +A+ F + G+ D YT ++
Sbjct: 746 R-NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
C+ G L +A+ + M E G P+ Y + G R G + ++ K ++ M KG
Sbjct: 805 CCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 148/668 (22%), Positives = 247/668 (36%), Gaps = 165/668 (24%)
Query: 40 LLSSMRDLKTVDAAVD-FFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
L+ + +L D A+D FF ++ P+IK LI+ ++ + + L
Sbjct: 152 LVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERL 211
Query: 99 GIEADSFTFTIVINCLCR----------LSRTDLGF----CVLGLMFKMGL--------- 135
G++AD+ T+ +V+ L R LSR + CV L F GL
Sbjct: 212 GLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIA 271
Query: 136 ---------------EPDI-VTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGA 179
+ D+ + +V GLC E +E A + + M++ G + Y + A
Sbjct: 272 YFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSA 331
Query: 180 IING-----------------------------------LCKVGNTSAAIGYFKKVEGRG 204
II G C++GN S A FK+
Sbjct: 332 IIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETN 391
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK 264
D Y D+L K G V EA+ L+ EMTGKGI PDV+ Y L G C +GK
Sbjct: 392 ISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGC--CLQGKCSD 449
Query: 265 K----------GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
G PD+ ++ + G+ A + M GV+P T+N +I
Sbjct: 450 AFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIE 509
Query: 315 AHCLQDQMQDAMKVYDSMIYK---------------GC--------------LPSTVTYN 345
++ A Y+S+ +K GC LP +V +
Sbjct: 510 GLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFT 569
Query: 346 -----------------------------------TLIHGWCKIKKMDKAMSLLGEMVNK 370
LI WC++ + KA +V K
Sbjct: 570 LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK 629
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
+ PD+ T+ ++ +C+ P A L M++ PD +TY+++L+ PE
Sbjct: 630 KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS------DPE- 682
Query: 431 VSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQG 490
+ + RE+E ++ + Y+IM++ C LK F ++ + + DV TYT++++
Sbjct: 683 LDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN 742
Query: 491 LCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD 550
L +M+ P+ Y + + + GD+ +++ M G D
Sbjct: 743 -------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPD 795
Query: 551 ATTTELLI 558
A LI
Sbjct: 796 AAPYTALI 803
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 121/503 (24%), Positives = 213/503 (42%), Gaps = 51/503 (10%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A D F + N + + V + + K+ AI L + M GI D +T +I
Sbjct: 380 AYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIG 439
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
C + F ++ M G PDIV + GL G ++A M+ G +
Sbjct: 440 GCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGR----------GF----------------K 206
TH +I GL G A +++ +E + GF +
Sbjct: 500 TYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLE 559
Query: 207 FDVP--VYTAIMDSLCKD-GLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK-- 261
F +P VY + SLC + +++A L M G++P+ Y L + +
Sbjct: 560 FPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKA 619
Query: 262 ------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
++ K I+PD+ T++ +++ YC+ +A L M R V+P+V TY+ L+N+
Sbjct: 620 REFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Query: 316 HCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
D M+ M+ +D +P V Y +I+ +C + + K +L +M + + PD
Sbjct: 680 DPELD-MKREMEAFD------VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPD 732
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
+ T+ L+ + L M+ PD Y +++D K EA ++
Sbjct: 733 VVTYTVLLKN-------KPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFD 785
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
++ + +D Y+ ++ C G LK+A+ F + G+K DV YT ++ G CR G
Sbjct: 786 QMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNG 845
Query: 496 LLDDAEQLLMDMEEKGCPPNDCT 518
+ A +L+ +M EKG P +
Sbjct: 846 FVLKAVKLVKEMLEKGIKPTKAS 868
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 148/319 (46%), Gaps = 8/319 (2%)
Query: 65 PFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGF 124
P P FT+ +L + + + A L+ RM LG+E + + +I CR++
Sbjct: 561 PLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAR 620
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
++ + PD+ T T ++N C +QA L M + + T+ ++N
Sbjct: 621 EFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN-- 678
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
+ + +++E DV YT +++ C + + L+ +M + I PDV
Sbjct: 679 -----SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDV 733
Query: 245 VTYNCLTRGLFHCSRGKVLKK-GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
VTY L + + + +K + PDV ++ ++D CK G + A+R+ M GV+
Sbjct: 734 VTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVD 793
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P+ Y +LI C +++A ++D MI G P V Y LI G C+ + KA+ L
Sbjct: 794 PDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKL 853
Query: 364 LGEMVNKGLTPDICTWNAL 382
+ EM+ KG+ P + +A+
Sbjct: 854 VKEMLEKGIKPTKASLSAV 872
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 137/304 (45%), Gaps = 30/304 (9%)
Query: 144 TIVNGLCAEGN-VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEG 202
T+ LCAE + + +A L RM ++G +G +I C+V N A +F+ +
Sbjct: 569 TLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVT 628
Query: 203 RGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV 262
+ D+ YT ++++ C+ +A L+ +M + ++PDVVTY+ L +
Sbjct: 629 KKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKRE 688
Query: 263 LKK-GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR---------------------- 299
++ ++PDV ++ +++ YC + + L M R
Sbjct: 689 MEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERNL 748
Query: 300 ------VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
V+P+VF Y LI+ C + +A +++D MI G P Y LI CK
Sbjct: 749 SREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK 808
Query: 354 IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRIT 413
+ + +A + M+ G+ PD+ + AL+ G C+ G L A +L+ M + G P + +
Sbjct: 809 MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Query: 414 YAII 417
+ +
Sbjct: 869 LSAV 872
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/519 (21%), Positives = 216/519 (41%), Gaps = 50/519 (9%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
+L+SM+D + A+ F ++ P+++ + +I +V L
Sbjct: 63 VLNSMKDDPYL--ALSFLKRIEGNVTLPSVQAYATVIRIVCGW--------------GLD 106
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMG-LEPDIVTLTTIVNGLC-AEGNVE- 156
+ D+F F +V R GF V+ L+ +G +E +V L + L A N++
Sbjct: 107 KKLDTFLFELV-----RRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDM 161
Query: 157 --QALGLAMRMD-EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
+A+ + R +G + +I+ + G + +G+F ++E G D Y
Sbjct: 162 FDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYV 221
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT 273
++ +L ++ E L S + + V Y GL C M D+
Sbjct: 222 LVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGL--CLNQ-------MTDIAY 272
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
F R ++ + +G+ Y ++ C + +++DA V M
Sbjct: 273 FLL---------QPLRDANILVDKSDLGI-----AYRKVVRGLCYEMRIEDAESVVLDME 318
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
G P Y+ +I G K + KA+ + +M+ K + ++++ +C+ G
Sbjct: 319 KHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFS 378
Query: 394 AAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIML 453
A +L ++ DR+ Y + D L K EA+ L+RE+ + + Y+ ++
Sbjct: 379 EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Query: 454 DGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCP 513
G C G+ DA + + G D+ Y ++ GL GL +A + L ME +G
Sbjct: 439 GGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVK 498
Query: 514 PNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
P T+N+ ++GL+ G++ ++E + + ++ K DA+
Sbjct: 499 PTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS 537
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 165/370 (44%), Gaps = 25/370 (6%)
Query: 209 VPVYTAIMDSLCKDGLVNEALGLW-SEMTGKGIQPDVVTYNCLTRGLFHCSRG------- 260
+ V TA++ + + +EA+ ++ G PD+ N L + R
Sbjct: 146 IRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFF 205
Query: 261 -KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG-FMARVGVEPNVFTYNSLINAHCL 318
++ + G+ D HT+ +V + E+L+ + P VF Y + I CL
Sbjct: 206 WEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVF-YLNFIEGLCL 264
Query: 319 QDQMQDA-----MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT 373
+QM D + D+ I + Y ++ G C +++ A S++ +M G+
Sbjct: 265 -NQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGID 323
Query: 374 PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF----YPE 429
PD+ ++A++ G K A ++ + M K + RI +I+ + +C+ + E
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRK---RIN-CVIVSSILQCYCQMGNFSE 379
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
A L++E + N+ Y++ D L G++++A E F + KG+ DV YT ++
Sbjct: 380 AYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIG 439
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
G C +G DA L+++M+ G P+ YN+ GL G + + L++M+ +G
Sbjct: 440 GCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKP 499
Query: 550 DATTTELLIN 559
T ++I
Sbjct: 500 TYVTHNMVIE 509
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 134/316 (42%), Gaps = 26/316 (8%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+ A D ++M + P + LI ++ + A + + + I D FT+TI
Sbjct: 581 ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTI 640
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+IN CRL+ + + M + ++PD+VT + ++N + L + M+
Sbjct: 641 MINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFD 693
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ + +IN C + + FK ++ R DV YT ++ +
Sbjct: 694 VIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKN-------KPER 746
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVD 279
L EM ++PDV Y L + C G ++++ G+ PD ++A++
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLID--WQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
CK G + A+ + M GV+P+V Y +LI C + A+K+ M+ KG P
Sbjct: 805 CCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Query: 340 STVTYNTLIHGWCKIK 355
+ + + + + K K
Sbjct: 865 TKASLSAVHYAKLKAK 880
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 122/278 (43%), Gaps = 25/278 (8%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
+ V A +FF + P++ +T++IN ++ A +L + M ++ D T
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+++++N +D + M + PD+V T ++N C ++++ L M
Sbjct: 673 YSVLLN-------SDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMK 725
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
+ T+ ++ + N S + F K DV YT ++D CK G +
Sbjct: 726 RREIVPDVVTYTVLLKNKPE-RNLSREMKAF------DVKPDVFYYTVLIDWQCKIGDLG 778
Query: 227 EALGLWSEMTGKGIQPDVVTYN-----CLTRGLFHCSR---GKVLKKGIMPDVHTFSAIV 278
EA ++ +M G+ PD Y C G ++ ++++ G+ PDV ++A++
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH 316
C+ G + +A +L+ M G++P T SL H
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKP---TKASLSAVH 873
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 202/463 (43%), Gaps = 65/463 (14%)
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
L I +T+ ++ LC+ DL + M G+ P+ L +V+ +G +
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
A L ++ E + G C V N+ +++
Sbjct: 157 ATALLLQSFE-------------VEGCCMVVNS------------------------LLN 179
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAI 277
+L K V +A+ L+ E D T+N L RGL
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL----------------------- 216
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY-DSMIYKG 336
C G +A L+G M+ G EP++ TYN+LI C +++ A +++ D
Sbjct: 217 ----CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
C P VTY ++I G+CK KM +A SLL +M+ G+ P T+N LV G+ KAG L A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
E+ M G PD +T+ ++DG + + L+ E+ + + YSI+++ L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
C+ RL ARE L +K + F Y ++ G C+ G +++A ++ +ME+K C P+
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
T+ + + G +G + + M G S D T L++
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 168/368 (45%), Gaps = 44/368 (11%)
Query: 75 LINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMG 134
L+N +VK+ A+ L D+ TF I+I LC + + + +LG+M G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 135 LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAI 194
EPDIVT T++ G C + +A EM
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKA-------SEM-------------------------- 263
Query: 195 GYFKKVE-GRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
FK V+ G DV YT+++ CK G + EA L +M GI P VT+N L G
Sbjct: 264 --FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 254 LFHCS--------RGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
RGK++ G PDV TF++++D YC+ G +++ RL M G+ PN
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
FTY+ LINA C ++++ A ++ + K +P YN +I G+CK K+++A ++
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
EM K PD T+ L+ G C G A + M G PD+IT + +L L K
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Query: 426 FYPEAVSL 433
EA L
Sbjct: 502 MAKEAYHL 509
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 144/328 (43%), Gaps = 31/328 (9%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGI-EADSFTFTI 109
+ A++ M+ P+I + LI K A + K + S + D T+T
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I+ C+ + +L M ++G+ P VT +V+G G + A + +M G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ T ++I+G C+VG S ++++ RG + Y+ ++++LC + + +A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
L ++ K I P YN ++D +CK G +
Sbjct: 403 ELLGQLASKDIIPQPFMYN---------------------------PVIDGFCKAGKVNE 435
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
A ++ M + +P+ T+ LI HC++ +M +A+ ++ M+ GC P +T ++L+
Sbjct: 436 ANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Query: 350 GWCKIKK-MDKAMSLLGEMVNKGLTPDI 376
C +K M K L ++ KG + ++
Sbjct: 496 --CLLKAGMAKEAYHLNQIARKGQSNNV 521
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 5/222 (2%)
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG-MPLAAKELIST 401
TYN L CK D A + M + G++P+ LV F + G + A L+ +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
+ G + +L+ L K +A+ L+ E + ++I++ GLC G+
Sbjct: 165 FEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG-CPPNDCTYN 520
+ A E + G + D+ TY ++QG C+ L+ A ++ D++ C P+ TY
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ G + G + + L M G T +L++ ++
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 59 KMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLS 118
KM + FP++ FT LI+ ++ + L + M++ G+ ++FT++I+IN LC +
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 119 RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHG 178
R +LG + + P +++G C G V +A + M++ + + T
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 179 AIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
+I G C G A+ F K+ G D ++++ L K G+ EA L +++ K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARK 515
Query: 239 GIQPDVV 245
G +VV
Sbjct: 516 GQSNNVV 522
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 202/463 (43%), Gaps = 65/463 (14%)
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
L I +T+ ++ LC+ DL + M G+ P+ L +V+ +G +
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
A L ++ E + G C V N+ +++
Sbjct: 157 ATALLLQSFE-------------VEGCCMVVNS------------------------LLN 179
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAI 277
+L K V +A+ L+ E D T+N L RGL
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGL----------------------- 216
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY-DSMIYKG 336
C G +A L+G M+ G EP++ TYN+LI C +++ A +++ D
Sbjct: 217 ----CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSV 272
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
C P VTY ++I G+CK KM +A SLL +M+ G+ P T+N LV G+ KAG L A+
Sbjct: 273 CSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAE 332
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
E+ M G PD +T+ ++DG + + L+ E+ + + YSI+++ L
Sbjct: 333 EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINAL 392
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
C+ RL ARE L +K + F Y ++ G C+ G +++A ++ +ME+K C P+
Sbjct: 393 CNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDK 452
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
T+ + + G +G + + M G S D T L++
Sbjct: 453 ITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 168/368 (45%), Gaps = 44/368 (11%)
Query: 75 LINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMG 134
L+N +VK+ A+ L D+ TF I+I LC + + + +LG+M G
Sbjct: 177 LLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFG 236
Query: 135 LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAI 194
EPDIVT T++ G C + +A EM
Sbjct: 237 CEPDIVTYNTLIQGFCKSNELNKA-------SEM-------------------------- 263
Query: 195 GYFKKVE-GRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
FK V+ G DV YT+++ CK G + EA L +M GI P VT+N L G
Sbjct: 264 --FKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDG 321
Query: 254 LFHCS--------RGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
RGK++ G PDV TF++++D YC+ G +++ RL M G+ PN
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPN 381
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
FTY+ LINA C ++++ A ++ + K +P YN +I G+CK K+++A ++
Sbjct: 382 AFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVE 441
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
EM K PD T+ L+ G C G A + M G PD+IT + +L L K
Sbjct: 442 EMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAG 501
Query: 426 FYPEAVSL 433
EA L
Sbjct: 502 MAKEAYHL 509
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 144/328 (43%), Gaps = 31/328 (9%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGI-EADSFTFTI 109
+ A++ M+ P+I + LI K A + K + S + D T+T
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTS 282
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I+ C+ + +L M ++G+ P VT +V+G G + A + +M G
Sbjct: 283 MISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFG 342
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ T ++I+G C+VG S ++++ RG + Y+ ++++LC + + +A
Sbjct: 343 CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKAR 402
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
L ++ K I P YN ++D +CK G +
Sbjct: 403 ELLGQLASKDIIPQPFMYN---------------------------PVIDGFCKAGKVNE 435
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
A ++ M + +P+ T+ LI HC++ +M +A+ ++ M+ GC P +T ++L+
Sbjct: 436 ANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLS 495
Query: 350 GWCKIKK-MDKAMSLLGEMVNKGLTPDI 376
C +K M K L ++ KG + ++
Sbjct: 496 --CLLKAGMAKEAYHLNQIARKGQSNNV 521
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 96/222 (43%), Gaps = 5/222 (2%)
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG-MPLAAKELIST 401
TYN L CK D A + M + G++P+ LV F + G + A L+ +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQS 164
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
+ G + +L+ L K +A+ L+ E + ++I++ GLC G+
Sbjct: 165 FEVEGCC---MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGK 221
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG-CPPNDCTYN 520
+ A E + G + D+ TY ++QG C+ L+ A ++ D++ C P+ TY
Sbjct: 222 AEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYT 281
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ G + G + + L M G T +L++ ++
Sbjct: 282 SMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYA 323
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 59 KMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLS 118
KM + FP++ FT LI+ ++ + L + M++ G+ ++FT++I+IN LC +
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 119 RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHG 178
R +LG + + P +++G C G V +A + M++ + + T
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 179 AIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
+I G C G A+ F K+ G D ++++ L K G+ EA L +++ K
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-NQIARK 515
Query: 239 GIQPDVV 245
G +VV
Sbjct: 516 GQSNNVV 522
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 201/469 (42%), Gaps = 46/469 (9%)
Query: 68 NIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVL 127
+++ T L+N +++ A S+ + G + T+T ++ L R ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 128 GLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKV 187
+ K GL+PD + I+N GN++QA+ + +M E G + + T +I G K+
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 188 GNTSAAIGYFKK-VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G + + + + ++ + C + EA + +M G++PDVVT
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 247 YNCLTRGLFHCSR---------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
+N L + ++L + P+V T IV+ YC+EG + A R M
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
+GV PN+F +NSLI + M +V D M G P VT++TL++ W + M
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
+ + +M+ G+ PDI ++ L G+ +AG P A+++++ M+K G P+ + Y I
Sbjct: 618 KRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQI 677
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGL-QAKG 476
+ G CS G +K A + + + G
Sbjct: 678 -----------------------------------ISGWCSAGEMKKAMQVYKKMCGIVG 702
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQG 525
L ++ TY ++ G AE+LL DME K P T L G
Sbjct: 703 LSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADG 751
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 212/448 (47%), Gaps = 21/448 (4%)
Query: 138 DIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYF 197
D+ + T ++NGL G ++A + + E G++ + T+ ++ L + + + +
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG---- 253
KVE G K D ++ AI+++ + G +++A+ ++ +M G +P T+N L +G
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 254 --LFHCSR--GKVLKKGIM-PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFT 308
L SR +L+ ++ P+ T + +V +C + I A ++ M GV+P+V T
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 309 YNSLINAH------CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
+N+L A+ C + M + M++ P+ T T+++G+C+ KM++A+
Sbjct: 498 FNTLAKAYARIGSTCTAEDM-----IIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALR 552
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
M G+ P++ +N+L+ GF E++ M++ G PD +T++ +++
Sbjct: 553 FFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS 612
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVF 482
+Y ++ + +D I +SI+ G G + A + + ++ G++ +V
Sbjct: 613 SVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVV 672
Query: 483 TYTIMVQGLCREGLLDDAEQLLMDM-EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQL 541
YT ++ G C G + A Q+ M G PN TY + G ++E+ L+
Sbjct: 673 IYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKD 732
Query: 542 MKGKGFSADATTTELLINFFSGNKADNT 569
M+GK T +L+ + + N+
Sbjct: 733 MEGKNVVPTRKTMQLIADGWKSIGVSNS 760
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 168/367 (45%), Gaps = 19/367 (5%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRM-HSL 98
++++ + +D A+ F KM P F LI K+ + L+ M
Sbjct: 395 IINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDE 454
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
++ + T I++ C + + + ++ M G++PD+VT T+ G+ A
Sbjct: 455 MLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTA 514
Query: 159 LGLAM-RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
+ + RM + N T G I+NG C+ G A+ +F +++ G ++ V+ +++
Sbjct: 515 EDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 218 SLCK----DGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKK 265
DG V E + L E G++PDVVT++ L K +L+
Sbjct: 575 GFLNINDMDG-VGEVVDLMEEF---GVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
GI PD+H FS + Y + G +AE+++ M + GV PNV Y +I+ C +M+ A
Sbjct: 631 GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA 690
Query: 326 MKVYDSMI-YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
M+VY M G P+ TY TLI G+ + K+ KA LL +M K + P T +
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIAD 750
Query: 385 GFCKAGM 391
G+ G+
Sbjct: 751 GWKSIGV 757
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 219/462 (47%), Gaps = 19/462 (4%)
Query: 114 LCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCN 173
LC+ +R V+ LM G+ PD T +VN LC GNV A+ L +M++ GY N
Sbjct: 116 LCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSN 175
Query: 174 SYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWS 233
+ T+ A++ GLC +G+ + ++ + +++ +G + Y+ ++++ K+ +EA+ L
Sbjct: 176 TVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLD 235
Query: 234 EMTGKGIQPDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCK 283
E+ KG +P++V+YN L G C G+ + KG +V +++ ++ C
Sbjct: 236 EIIVKGGEPNLVSYNVLLTGF--CKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCC 293
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
+G A L+ M P+V TYN LIN+ + + A++V M KG VT
Sbjct: 294 DGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVT 352
Query: 344 ---YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA-AKELI 399
YN +I CK K+D + L EM+ + P+ T+NA +G C+ + A +I
Sbjct: 353 ATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYII 411
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
++ + Y ++ L + A L E+ + D YS ++ GLC
Sbjct: 412 QSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLE 471
Query: 460 GRLKDAREFFSGLQ-AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
G A E S ++ ++ K V + M+ GLC+ D A ++ M EK PN+ T
Sbjct: 472 GMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETT 531
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
Y + V+G+ ++ +++ L ++ + +++ F
Sbjct: 532 YAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIVMQF 573
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/479 (25%), Positives = 205/479 (42%), Gaps = 44/479 (9%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
+LL + + A+ M + P+ +T L+N + K + A+ LV++M
Sbjct: 111 QLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDH 170
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
G +++ T+ ++ LC L + + + + GL P+ T + ++ E ++A
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
+ L + G N ++ ++ G CK G T A+ F+++ +GFK +V Y ++
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRC 290
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL-FHCSRGKVLK--KGIMPDVHTFS 275
LC DG EA L +EM G P VVTYN L L FH + L+ K + H F
Sbjct: 291 LCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFR 350
Query: 276 AIVDNY-------CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
+Y CKEG + + + M +PN TYN++ + ++Q+A +
Sbjct: 351 VTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYI 410
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
S+ K + Y ++I C+ A LL EM G PD T++AL+ G C
Sbjct: 411 IQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCL 470
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
GM A E++S M+ E N +
Sbjct: 471 EGMFTGAMEVLSIME----------------------------------ESENCKPTVDN 496
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
++ M+ GLC R A E F + K + TY I+V+G+ E L+ A+++L ++
Sbjct: 497 FNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 198/450 (44%), Gaps = 17/450 (3%)
Query: 123 GFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIIN 182
F L + G +P++ T ++ LC +++A+ + M G ++ + ++N
Sbjct: 90 SFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVN 149
Query: 183 GLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQP 242
LCK GN A+ +K+E G+ + Y A++ LC G +N++L + KG+ P
Sbjct: 150 QLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAP 209
Query: 243 DVVTYNCLTRGLFHCSRG---------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
+ TY+ L + RG +++ KG P++ +++ ++ +CKEG A L
Sbjct: 210 NAFTYSFLLEAAYK-ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
+ G + NV +YN L+ C + ++A + M PS VTYN LI+
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAF 328
Query: 354 IKKMDKAMSLLGEMV--NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
+ ++A+ +L EM N ++N ++ CK G + + M P+
Sbjct: 329 HGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNE 388
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
TY I EA + + L Y ++ LC G A +
Sbjct: 389 GTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYE 448
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE-KGCPPNDCTYNLFVQGL--LR 528
+ G D TY+ +++GLC EG+ A ++L MEE + C P +N + GL +R
Sbjct: 449 MTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIR 508
Query: 529 RGDISRSEKYLQLMKGKGFSADATTTELLI 558
R D++ + ++M K + TT +L+
Sbjct: 509 RTDLAM--EVFEMMVEKKRMPNETTYAILV 536
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 155/335 (46%), Gaps = 31/335 (9%)
Query: 189 NTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN 248
N S + + + + G K +V T ++ LCK + +A+ + M GI PD Y
Sbjct: 86 NLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 249 CLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFT 308
L V+ CK G + A +L+ M G N T
Sbjct: 146 YL---------------------------VNQLCKRGNVGYAMQLVEKMEDHGYPSNTVT 178
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
YN+L+ C+ + +++ + ++ KG P+ TY+ L+ K + D+A+ LL E++
Sbjct: 179 YNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEII 238
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
KG P++ ++N L+ GFCK G A L + G + ++Y I+L L +
Sbjct: 239 VKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWE 298
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG---LKIDVFTYT 485
EA SL E++ + + Y+I+++ L +GR + A + + +KG ++ +Y
Sbjct: 299 EANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYN 357
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
++ LC+EG +D + L +M + C PN+ TYN
Sbjct: 358 PVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYN 392
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%)
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
+ + D+ +S++ G P+ L++ CK ++ KA+ ++ MV+ G+ PD
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
+ LV CK G A +L+ M+ HG + +TY ++ GL +++ L
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
+ L + YS +L+ +A + + KG + ++ +Y +++ G C+EG D
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTD 263
Query: 499 DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
DA L ++ KG N +YN+ ++ L G + L M G + T +LI
Sbjct: 264 DAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILI 323
Query: 559 N 559
N
Sbjct: 324 N 324
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/205 (20%), Positives = 77/205 (37%), Gaps = 35/205 (17%)
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+ + S L +V G P++ L+ CKA A +I M G +PD
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPD------ 140
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
+ Y+ +++ LC G + A + ++ G
Sbjct: 141 -----------------------------ASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
+ TY +V+GLC G L+ + Q + + +KG PN TY+ ++ + +
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAV 231
Query: 537 KYLQLMKGKGFSADATTTELLINFF 561
K L + KG + + +L+ F
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGF 256
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 197/413 (47%), Gaps = 40/413 (9%)
Query: 153 GNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGR-GFKFDVPV 211
G ++++ L M +MG + T ++++ L K G T A F ++ G D
Sbjct: 152 GLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYT 211
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDV 271
+ +++ CK+ +V+EA ++ +M L+HC+ PDV
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDME-----------------LYHCN----------PDV 244
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMAR--VGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
T++ I+D C+ G + A ++ M + V PNV +Y +L+ +C++ ++ +A+ V+
Sbjct: 245 VTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVF 304
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL--GEMVNKGLTPDICTWNALVGGFC 387
M+ +G P+ VTYNTLI G + + D+ +L G PD CT+N L+ C
Sbjct: 305 HDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHC 364
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL-EKMNL---- 442
AG AA ++ M PD +Y++++ L + + A +L+ EL EK L
Sbjct: 365 DAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKD 424
Query: 443 --DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
Y+ M + LC+ G+ K A + F L +G++ D +Y ++ G CREG A
Sbjct: 425 ECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPA 483
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
+LL+ M + P+ TY L + GLL+ G+ + LQ M + ATT
Sbjct: 484 YELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 536
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 120/517 (23%), Positives = 207/517 (40%), Gaps = 94/517 (18%)
Query: 85 YTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKM-GLEPDIVTLT 143
+ ++ L + M +GI TF +++ L + RT + + M + G+ PD T
Sbjct: 154 FQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFN 213
Query: 144 TIVNGLCAEGNVEQALGLAMRMDEMGYRCNS--YTHGAIINGLCKVGNTSAA----IGYF 197
T++NG C V++A + M+ Y CN T+ II+GLC+ G A G
Sbjct: 214 TLINGFCKNSMVDEAFRIFKDME--LYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGML 271
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC 257
KK +V YT ++ C ++EA+ ++ +M +G++P+ VTYN L +GL
Sbjct: 272 KK--ATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEA 329
Query: 258 SRGKVLKKGIM----------PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVF 307
R +K ++ PD TF+ ++ +C G + A ++ M + + P+
Sbjct: 330 HRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSA 389
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKG-------CLPSTVTYN--------------- 345
+Y+ LI C++++ A +++ + K C P YN
Sbjct: 390 SYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQA 449
Query: 346 -------------------TLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
TLI G C+ K A LL M+ + PD+ T+ L+ G
Sbjct: 450 EKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA---VSLYRELE-KMNL 442
K G L A + + M + LP T+ +L L K F E+ V+L E + N+
Sbjct: 510 LKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNI 569
Query: 443 DRHITIYSIMLDG----------------------------LCSYGRLKDAREFFSGLQA 474
D + ++ LC +L DA
Sbjct: 570 DLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLE 629
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
K +D+ T +++GLC+ +A L ++ E G
Sbjct: 630 KSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELG 666
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 132/268 (49%), Gaps = 5/268 (1%)
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
F++++ +Y G+ + +L M ++G+ P+V T+NSL++ + + A ++D M
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 334 YK-GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
G P + T+NTLI+G+CK +D+A + +M PD+ T+N ++ G C+AG
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 393 LAAKELISTMQKHGQ--LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
A ++S M K P+ ++Y ++ G EAV ++ ++ L + Y+
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAK--GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
++ GL R + ++ G D T+ I+++ C G LD A ++ +M
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSE 536
P+ +Y++ ++ L R + R+E
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAE 408
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 196/501 (39%), Gaps = 92/501 (18%)
Query: 53 AVDFFNKMA-AINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVI 111
A D F++M P+ F LIN K A + K M D T+ +I
Sbjct: 192 AHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTII 251
Query: 112 NCLCRLSRTDLGFCVLGLMFKMG--LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+ LCR + + VL M K + P++V+ TT+V G C + +++A+ + M G
Sbjct: 252 DGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRG 311
Query: 170 YRCNSYTHGAIINGL-------------------------------------CKVGNTSA 192
+ N+ T+ +I GL C G+ A
Sbjct: 312 LKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDA 371
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGI-------QPDVV 245
A+ F+++ D Y+ ++ +LC + A L++E+ K + +P
Sbjct: 372 AMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAA 431
Query: 246 TYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
YN + L C+ GK ++K+G+ D ++ ++ +C+EG A L+
Sbjct: 432 AYNPMFEYL--CANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLV 488
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
M R P++ TY LI+ + A M+ LP T+++++ K K
Sbjct: 489 LMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRK 548
Query: 356 KMDKAMSLLGEMVNKGLTPDI--------------------------------CTWNALV 383
+++ L+ M+ K + +I L+
Sbjct: 549 FANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELL 608
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
G C+ L A L+ + Q+ D T +++GL K + EA SLY EL ++
Sbjct: 609 GYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNH 668
Query: 444 RHITIYSIMLDGLCSYGRLKD 464
+ ++ + ++ + L + G+ ++
Sbjct: 669 QQLSCHVVLRNALEAAGKWEE 689
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 206/438 (47%), Gaps = 18/438 (4%)
Query: 136 EPDIVTLTTIVNGLCAEGNVEQALGLAMRM-DEMGYRCNSYTHGAIINGLCKVGNTSAAI 194
+P T +++ L EG E+ + M +E ++ T+ A+I+ K+G +AI
Sbjct: 194 KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAI 253
Query: 195 GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
F +++ + +YT ++ K G V +AL L+ EM G P V TY L +GL
Sbjct: 254 RLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGL 313
Query: 255 FHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV---E 303
R +L+ G+ PDV + +++ G + R E L + +G+
Sbjct: 314 GKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL---GKVGRVEELTNVFSEMGMWRCT 370
Query: 304 PNVFTYNSLINA-HCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
P V +YN++I A + + + +D M PS TY+ LI G+CK +++KA+
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH-GQLPDRITYAIILDGL 421
LL EM KG P + +L+ KA AA EL ++++ G + R+ YA+++
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV-YAVMIKHF 489
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
KC EAV L+ E++ + Y+ ++ G+ G + +A ++ G + D+
Sbjct: 490 GKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADI 549
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQL 541
++ I++ G R G+ A ++ ++ G P+ TYN + G + + ++
Sbjct: 550 NSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMRE 609
Query: 542 MKGKGFSADATTTELLIN 559
MK KGF DA T +++
Sbjct: 610 MKDKGFEYDAITYSSILD 627
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 206/463 (44%), Gaps = 10/463 (2%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
EL+ ++ K V A+ F + P + +I ++++ + + M +
Sbjct: 167 ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNE 226
Query: 99 G-IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
G D+ T++ +I+ +L R D + M ++P TT++ G VE+
Sbjct: 227 GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
AL L M G YT+ +I GL K G A G++K + G DV +M+
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMN 346
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF----HCSR-----GKVLKKGIM 268
L K G V E ++SEM P VV+YN + + LF H S K+ +
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P T+S ++D YCK + +A L+ M G P Y SLINA + + A ++
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+ + S+ Y +I + K K+ +A+ L EM N+G PD+ +NAL+ G K
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
AGM A L+ M+++G D ++ IIL+G + A+ ++ ++ +
Sbjct: 527 AGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGL 491
Y+ +L G ++A ++ KG + D TY+ ++ +
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 183/428 (42%), Gaps = 45/428 (10%)
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
++ L + S A+ F + +GR K Y +++ L ++G + +++EM +G
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 240 -IQPDVVTYNCLTRGLFHCSRGKV-------LKKGIM-PDVHTFSAIVDNYCKEGMIARA 290
PD +TY+ L R +K M P ++ ++ Y K G + +A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
L M R G P V+TY LI ++ +A Y M+ G P V N L++
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA-AKELISTMQKHGQLP 409
K+ ++++ ++ EM TP + ++N ++ ++ ++ M+ P
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 410 DRITYAIILDG-----------------------------------LFKCHFYPEAVSLY 434
TY+I++DG L K Y A L+
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 435 RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
+EL++ + +Y++M+ G+L +A + F+ ++ +G DV+ Y ++ G+ +
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527
Query: 495 GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTT 554
G++++A LL MEE GC + ++N+ + G R G R+ + + +K G D T
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587
Query: 555 ELLINFFS 562
L+ F+
Sbjct: 588 NTLLGCFA 595
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 10/214 (4%)
Query: 308 TYNSLINAHCLQD-----QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
TY +LI CL++ +M ++ Y P+ ++ L+ + K + KA+S
Sbjct: 128 TYMTLI--RCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLS--ELVKALGRAKMVSKALS 183
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ-LPDRITYAIILDGL 421
+ + + P T+N+++ + G E+ + M G PD ITY+ ++
Sbjct: 184 VFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSY 243
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
K A+ L+ E++ + IY+ +L G+++ A + F ++ G V
Sbjct: 244 EKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTV 303
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
+TYT +++GL + G +D+A DM G P+
Sbjct: 304 YTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
AVD FN+M P++ + L++ +VK A SL+++M G AD + I++N
Sbjct: 498 AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILN 557
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
R + + G++PD VT T++ G E+A + M + G+
Sbjct: 558 GFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEY 617
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYF 197
++ T+ +I++ + V + + F
Sbjct: 618 DAITYSSILDAVGNVDHEKDDVSSF 642
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 204/499 (40%), Gaps = 66/499 (13%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+ LI + A++L+ +M G ++D +++VI L R ++ D +L L
Sbjct: 200 YNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKID-SVMLLRLYK 258
Query: 132 KM---GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVG 188
++ LE D+ + I+ G G+ +AL L G + T +II+ L G
Sbjct: 259 EIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSG 318
Query: 189 NTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN 248
T A F+++ G K Y A++ K G + +A + SEM
Sbjct: 319 RTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEME------------ 366
Query: 249 CLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFT 308
K+G+ PD HT+S ++D Y G A ++ M V+PN F
Sbjct: 367 ---------------KRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFV 411
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
++ L+ + + Q +V M G P YN +I + K +D AM+ M+
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRML 471
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
++G+ PD TWN L+ CK G + A+E+ M++ G LP C
Sbjct: 472 SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLP--------------C---- 513
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
T Y+IM++ R D + ++++G+ +V T+T +V
Sbjct: 514 -----------------ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
+ G +DA + L +M+ G P+ YN + +RG ++ ++M G
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLK 616
Query: 549 ADATTTELLINFFSGNKAD 567
LIN F ++ D
Sbjct: 617 PSLLALNSLINAFGEDRRD 635
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 172/394 (43%), Gaps = 16/394 (4%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++S++ D A F ++ P + + L+ VK A S+V M G
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ D T++++I+ R + VL M ++P+ + ++ G G ++
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ M +G + + + +I+ K A+ F ++ G + D + ++D
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDV 271
CK G A ++ M +G P TYN + R GK+ +GI+P+V
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNV 549
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
T + +VD Y K G A + M VG++P+ YN+LINA+ + + A+ +
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG- 390
M G PS + N+LI+ + + ++ +A ++L M G+ PD+ T+ L+ +
Sbjct: 610 MTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDK 669
Query: 391 ---MPLAAKELISTMQKHGQLPDRITYAIILDGL 421
+P+ +E+I + G PDR +++ L
Sbjct: 670 FQKVPVVYEEMIMS----GCKPDRKARSMLRSAL 699
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/529 (22%), Positives = 228/529 (43%), Gaps = 45/529 (8%)
Query: 73 TVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFK 132
+VL N + + ++ L+K + G ++I RL V +
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISF 173
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
+G++P +++ L +++ A +M G + + +T+ +I+G+CK G
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
AI K++E G + +V YT ++D G V+EAL M + + P+ T
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 253 GLFHC---------------------------------------SRGKVLKK----GIMP 269
G+F C G+ L+K G +P
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 270 DVHTFSAIVDNYCKEGMIARAERLM-GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
D TF+A + K + R+ GF++R GV+P Y L+ A + + +
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSR-GVKPGFNGYLVLVQALLNAQRFSEGDRY 412
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
M G L S +YN +I CK ++++ A L EM ++G++P++ T+N + G+
Sbjct: 413 LKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G ++ + HG PD IT+++I++ L + +A ++E+ + ++ +
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
Y+I++ CS G + + F+ ++ GL D++ Y +Q C+ + AE+LL M
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
G P++ TY+ ++ L G S + + ++ G D+ T L+
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLV 641
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 217/488 (44%), Gaps = 8/488 (1%)
Query: 55 DFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCL 114
D F +++ + P+ + + +I+ +VK A ++M S G + D FT+ I+I+ +
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 115 CRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNS 174
C+ D ++ M + G P++ T T +++G G V++AL M N
Sbjct: 226 CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNE 285
Query: 175 YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
T ++G+ + A + Y A++ L + + E +
Sbjct: 286 ATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRK 345
Query: 235 MTGKGIQPDVVTYN----CLTRG--LFHCSR--GKVLKKGIMPDVHTFSAIVDNYCKEGM 286
+ +G PD T+N CL +G L R + +G+ P + + +V
Sbjct: 346 IGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQR 405
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
+ +R + M G+ +V++YN++I+ C ++++A M +G P+ VT+NT
Sbjct: 406 FSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNT 465
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG 406
+ G+ + K +L +++ G PD+ T++ ++ C+A A + M + G
Sbjct: 466 FLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWG 525
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
P+ ITY I++ +V L+ ++++ L + Y+ + C ++K A
Sbjct: 526 IEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAE 585
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
E + GLK D FTY+ +++ L G +A ++ +E GC P+ T L +
Sbjct: 586 ELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELD 645
Query: 527 LRRGDISR 534
LR+ +SR
Sbjct: 646 LRKSGLSR 653
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 110/460 (23%), Positives = 206/460 (44%), Gaps = 14/460 (3%)
Query: 49 TVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFT 108
++D A F +M + P+ + +LI+ V K AI LVK+M G + FT+T
Sbjct: 195 SLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYT 254
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
I+I+ R D L +M L P+ T+ T V+G+ +A + + E
Sbjct: 255 ILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEK 314
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
+ A++ L + +K+ RG+ D + A M L K + E
Sbjct: 315 DSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVET 374
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR----GKVLKK----GIMPDVHTFSAIVDN 280
++ +G++P Y L + L + R + LK+ G++ V++++A++D
Sbjct: 375 CRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDC 434
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
CK I A + M G+ PN+ T+N+ ++ + ++ ++ V + ++ G P
Sbjct: 435 LCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPD 494
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
+T++ +I+ C+ K++ A EM+ G+ P+ T+N L+ C G + +L +
Sbjct: 495 VITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFA 554
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M+++G PD Y + K +A L + + ++ L YS ++ L G
Sbjct: 555 KMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESG 614
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQ------GLCRE 494
R +ARE FS ++ G D +T ++ + GL RE
Sbjct: 615 RESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGLSRE 654
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 185/485 (38%), Gaps = 97/485 (20%)
Query: 147 NGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFK 206
N L +G + ++ L + + GYR + +I ++G F ++ G K
Sbjct: 118 NALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMK 177
Query: 207 FDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKG 266
+Y A++D+L K ++ A + +M G +PD TYN L G+
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV------------ 225
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
CK+G++ A RL+ M + G PNVFTY LI+ + ++ +A+
Sbjct: 226 ---------------CKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEAL 270
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
K + M + P+ T T +HG + KA +L + K ++A++
Sbjct: 271 KQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCL 330
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLY------------ 434
M + + + + G +PD T+ + L K H E ++
Sbjct: 331 SNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGF 390
Query: 435 --------------------RELEKMNLD---RHITIYSIMLDGLCSYGRLKDAREFFSG 471
R L++M +D + Y+ ++D LC R+++A F +
Sbjct: 391 NGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTE 450
Query: 472 LQAKGL-----------------------------------KIDVFTYTIMVQGLCREGL 496
+Q +G+ K DV T+++++ LCR
Sbjct: 451 MQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKE 510
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTEL 556
+ DA +M E G PN+ TYN+ ++ GD RS K MK G S D
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNA 570
Query: 557 LINFF 561
I F
Sbjct: 571 TIQSF 575
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 55/129 (42%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
K + A D F +M PN + +LI ++ L +M G+ D + +
Sbjct: 509 KEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAY 568
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
I C++ + +L M ++GL+PD T +T++ L G +A + ++
Sbjct: 569 NATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628
Query: 168 MGYRCNSYT 176
G +SYT
Sbjct: 629 HGCVPDSYT 637
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 217/450 (48%), Gaps = 17/450 (3%)
Query: 93 KRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAE 152
K M SLG + TF +VI C+ S+ V M K G+ P++V+ +++G C
Sbjct: 207 KEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKT 266
Query: 153 GNVEQALGLAMRMDEMG---YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDV 209
G++ AL L +M M N+ T+ ++ING CK G A + G +
Sbjct: 267 GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNE 326
Query: 210 PVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----VLK- 264
Y A++D+ + G +EAL L EMT KG+ + V YN + LF + VL+
Sbjct: 327 RTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRD 386
Query: 265 ---KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
K + D T + +V C+ G + A ++ + ++ +N+L++ +
Sbjct: 387 MNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKK 446
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
+ A ++ SM+ +G +++ TLI G+ K K+++A+ + M+ T ++ +N+
Sbjct: 447 LACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNS 506
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
+V G K GM AA+ +++ M+ + D +TY +L+ K EA + +++K +
Sbjct: 507 IVNGLSKRGMAGAAEAVVNAME----IKDIVTYNTLLNESLKTGNVEEADDILSKMQKQD 562
Query: 442 LDRHITI--YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDD 499
++ +++ ++IM++ LC +G + A+E + +G+ D TY ++ + +
Sbjct: 563 GEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEK 622
Query: 500 AEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
+L + +G P++ Y V+ LL R
Sbjct: 623 VVELHDYLILQGVTPHEHIYLSIVRPLLDR 652
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/489 (22%), Positives = 208/489 (42%), Gaps = 46/489 (9%)
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
A ++++ + G + CL ++ D + V M +G ++ T ++
Sbjct: 167 AYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIY 226
Query: 148 GLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF 207
C E + +AL + RM + G N + +I+G CK G+ A+
Sbjct: 227 SFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFAL------------- 273
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG--------LFHCSR 259
+ LG M+G + P+ VTYN + G L R
Sbjct: 274 -------------------QLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314
Query: 260 GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQ 319
G ++K G+ + T+ A+VD Y + G A RL M G+ N YNS++ ++
Sbjct: 315 GDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFME 374
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
++ AM V M K T ++ G C+ + +A+ ++ K L DI
Sbjct: 375 GDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCH 434
Query: 380 NALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
N L+ F + A +++ +M G D I++ ++DG K A+ +Y + K
Sbjct: 435 NTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIK 494
Query: 440 MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDD 499
MN ++ IY+ +++GL G A + ++ K D+ TY ++ + G +++
Sbjct: 495 MNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEE 550
Query: 500 AEQLLMDMEEKGCPPND--CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
A+ +L M+++ + T+N+ + L + G ++++ L+ M +G D+ T L
Sbjct: 551 ADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTL 610
Query: 558 INFFSGNKA 566
I FS +++
Sbjct: 611 ITSFSKHRS 619
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/514 (22%), Positives = 220/514 (42%), Gaps = 54/514 (10%)
Query: 53 AVDFFNKMAAINPFPN----IKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFT 108
A++F+N + N + V+I+L+V + + A+S++ + S +E + +
Sbjct: 74 ALEFYNWVLRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMS--VEGEKLSPL 131
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
V++ L R + C G PD+ ++V G+ + A + +
Sbjct: 132 HVLSGLIRSYQA----C--------GSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAE 177
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G+ + + + L V +K+++ G+ +V + ++ S CK+ + EA
Sbjct: 178 GFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEA 237
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
L ++ M LK G+ P+V +F+ ++D CK G +
Sbjct: 238 LSVFYRM---------------------------LKCGVWPNVVSFNMMIDGACKTGDMR 270
Query: 289 RAERL---MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYN 345
A +L MG M+ V PN TYNS+IN C ++ A ++ M+ G + TY
Sbjct: 271 FALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYG 330
Query: 346 TLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH 405
L+ + + D+A+ L EM +KGL + +N++V G A ++ M
Sbjct: 331 ALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 406 GQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDA 465
DR T AI++ GL + + EAV R++ + L I ++ ++ +L A
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACA 450
Query: 466 REFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQG 525
+ + +GL +D ++ ++ G +EG L+ A ++ M + N YN V G
Sbjct: 451 DQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNG 510
Query: 526 LLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
L +RG +E + M+ K D T L+N
Sbjct: 511 LSKRGMAGAAEAVVNAMEIK----DIVTYNTLLN 540
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 175/414 (42%), Gaps = 44/414 (10%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG---IEADSFTFTI 109
A+ F +M +PN+ F ++I+ K A+ L+ +M + + ++ T+
Sbjct: 237 ALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNS 296
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
VIN C+ R DL + G M K G++ + T +V+ G+ ++AL L M G
Sbjct: 297 VINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKG 356
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
N+ + +I+ L G+ A+ + + + + D ++ LC++G V EA+
Sbjct: 357 LVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAV 416
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNY 281
+++ K + D+V +N L + G +L +G+ D +F ++D Y
Sbjct: 417 EFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGY 476
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQ------DQMQDAMKVYDSMIYK 335
KEG + RA + M ++ N+ YNS++N + + + +AM++ D + Y
Sbjct: 477 LKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYN 536
Query: 336 GCLP---------------------------STVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
L S VT+N +I+ CK +KA +L MV
Sbjct: 537 TLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMV 596
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
+G+ PD T+ L+ F K EL + G P Y I+ L
Sbjct: 597 ERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIVRPLL 650
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 142/346 (41%), Gaps = 46/346 (13%)
Query: 230 GLWSEMTGKGIQPDVV-------TYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYC 282
GL G PDV T N +G + + +G VH + +
Sbjct: 136 GLIRSYQACGSSPDVFDSLVRACTQNGDAQGAYEVIE-QTRAEGFCVSVHALNNFMGCLL 194
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
I R ++ M +G NV T+N +I + C + ++ +A+ V+ M+ G P+ V
Sbjct: 195 NVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVV 254
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEM---VNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
++N +I G CK M A+ LLG+M ++P+ T+N+++ GFCKAG A+ +
Sbjct: 255 SFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIR 314
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
M K G + TY ++D + EA+ L E+
Sbjct: 315 GDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEM---------------------- 352
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
+KGL ++ Y +V L EG ++ A +L DM K + T
Sbjct: 353 -------------TSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQ 399
Query: 520 NLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNK 565
+ V+GL R G + + ++ + + K D L++ F +K
Sbjct: 400 AIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDK 445
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 212/476 (44%), Gaps = 49/476 (10%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ S L V+ + + KM P + + L+N +V +A + + M S
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR 252
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
I+ D T+ +I C+ +T L M G E D +T T++ A+ + +
Sbjct: 253 IKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCV 312
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L MDE G + + +I GLCK G + F+ + +G K +V +YT ++D
Sbjct: 313 ALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGY 372
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIMP 269
K G V +A+ L M +G +PDVVTY+ + GL C G+V + G+
Sbjct: 373 AKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGL--CKNGRVEEALDYFHTCRFDGLAI 430
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+ +S+++D K G + AERL M+ G + + YN+LI+A ++ +A+ ++
Sbjct: 431 NSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALF 490
Query: 330 DSM-IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
M +GC + TY L+ G K + ++A+ L M++KG+TP + AL G C
Sbjct: 491 KRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCL 550
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
+G A +++ + G +ILD C
Sbjct: 551 SGKVARACKILDELAPMG---------VILDA--ACE----------------------- 576
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
M++ LC GR+K+A + G+ +G ++ T+M+ L + G D A +L+
Sbjct: 577 --DMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLM 630
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 120/442 (27%), Positives = 208/442 (47%), Gaps = 29/442 (6%)
Query: 92 VKRMHSLGIEADSFTFTIVINCLCRLSRT--DLG-----FCVLGLMFKMGLEPDIVTLTT 144
V R+ + E F F + ++ L ++ LG V M + G+EP + T
Sbjct: 168 VDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227
Query: 145 IVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG 204
++NGL + V+ A + M+ + + T+ +I G CK G T A+ + +E RG
Sbjct: 228 LMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRG 287
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV-- 262
+ D Y ++ + D + L+ EM KGIQ ++ + GL C GK+
Sbjct: 288 HEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGL--CKEGKLNE 345
Query: 263 --------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
++KG P+V ++ ++D Y K G + A RL+ M G +P+V TY+ ++N
Sbjct: 346 GYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP 374
C ++++A+ + + + G +++ Y++LI G K ++D+A L EM KG T
Sbjct: 406 GLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR 465
Query: 375 DICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRI-TYAIILDGLFKCHFYPEAVSL 433
D +NAL+ F K A L M++ + TY I+L G+FK H EA+ L
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 434 YRELEKMNLDRHIT----IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
+ M +D+ IT + + GLC G++ A + L G+ +D M+
Sbjct: 526 W----DMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MIN 580
Query: 490 GLCREGLLDDAEQLLMDMEEKG 511
LC+ G + +A +L + E+G
Sbjct: 581 TLCKAGRIKEACKLADGITERG 602
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 164/357 (45%), Gaps = 9/357 (2%)
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC------- 257
F V A++ S K G+V E L +W +M GI+P + TYN L GL
Sbjct: 183 FPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAE 242
Query: 258 SRGKVLKKG-IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH 316
+V++ G I PD+ T++ ++ YCK G +A + M G E + TY ++I A
Sbjct: 243 RVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQAC 302
Query: 317 CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
+ +Y M KG ++ +I G CK K+++ ++ M+ KG P++
Sbjct: 303 YADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNV 362
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
+ L+ G+ K+G A L+ M G PD +TY+++++GL K EA+ +
Sbjct: 363 AIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
L + YS ++DGL GR+ +A F + KG D + Y ++ +
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 497 LDDAEQLLMDM-EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
+D+A L M EE+GC TY + + G+ + + K +M KG + A
Sbjct: 483 VDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAA 539
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 129/254 (50%)
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
V N+LI + +++ + V+ M G P+ TYN L++G +D A +
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
M + + PDI T+N ++ G+CKAG A E + M+ G D+ITY ++ +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
+ V+LY+E+++ + +S+++ GLC G+L + F + KG K +V YT
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
+++ G + G ++DA +LL M ++G P+ TY++ V GL + G + + Y +
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD 426
Query: 546 GFSADATTTELLIN 559
G + ++ LI+
Sbjct: 427 GLAINSMFYSSLID 440
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 2/193 (1%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL-GIEADSFTFT 108
VD A F +M+ + + LI+ K + AI+L KRM G + +T+T
Sbjct: 448 VDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYT 507
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
I+++ + + R + + +M G+ P + GLC G V +A + + M
Sbjct: 508 ILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPM 567
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G ++ +IN LCK G A + RG + + T ++++L K G + A
Sbjct: 568 GVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGKADLA 626
Query: 229 LGLWSEMTGKGIQ 241
+ L G G +
Sbjct: 627 MKLMHSKIGIGYE 639
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 59/124 (47%)
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
E++K ++ + ++ G +++ + ++ G++ ++TY ++ GL
Sbjct: 177 EIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAM 236
Query: 496 LLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTE 555
+D AE++ ME P+ TYN ++G + G ++ + L+ M+ +G AD T
Sbjct: 237 FVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 556 LLIN 559
+I
Sbjct: 297 TMIQ 300
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/569 (21%), Positives = 247/569 (43%), Gaps = 59/569 (10%)
Query: 34 TPKRRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKE-FTVLINLVVKMKHYTTAISLV 92
P ++ + D K+ A++ F + F + + + L + + + + T L+
Sbjct: 40 VPSDDHIVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLL 99
Query: 93 KRM-HSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCA 151
M S+G+ D F +I R V+ L+ K G++P + +I++ L
Sbjct: 100 DEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK 159
Query: 152 EGNVEQALGLAMR-MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP 210
E +++ A R M G + YT+G ++ GL + ++ G +
Sbjct: 160 E-DIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAV 218
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK----- 265
VY ++ +LCK+G V A L SEM +P+ VT+N L +C+ K+++
Sbjct: 219 VYNTLLHALCKNGKVGRARSLMSEMK----EPNDVTFNILISA--YCNEQKLIQSMVLLE 272
Query: 266 -----GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
G +PDV T + +++ C EG ++ A ++ + G + +V N+L+ +C
Sbjct: 273 KCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALG 332
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+M+ A + + M KG LP+ TYN LI G+C + +D A+ +M + + T+N
Sbjct: 333 KMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFN 392
Query: 381 ALVGGFCKAGMPLAAKELISTMQK----HGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
L+ G G +++ MQ HG D Y ++ G +K + + +A+ +
Sbjct: 393 TLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLK 450
Query: 437 LEKM---NLDRHITIYSI------------------------------MLDGLCSYGRLK 463
+EK+ +DR + S+ ++ +G+++
Sbjct: 451 MEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIE 510
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
++ E + + +G T+ ++ G C++ + + + + DM E+GC P+ +YN +
Sbjct: 511 ESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLL 570
Query: 524 QGLLRRGDISRSEKYLQLMKGKGFSADAT 552
+ L +GDI ++ M K D +
Sbjct: 571 EELCVKGDIQKAWLLFSRMVEKSIVPDPS 599
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 109/494 (22%), Positives = 203/494 (41%), Gaps = 41/494 (8%)
Query: 75 LINLVVKMKHYTTAISLVKRMHSL-GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF-K 132
++ L++ K + A+ + + G T+ + + LC R D + +L M
Sbjct: 46 IVRLILDQKSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDS 105
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
+GL PD TI+ G +++ + + + + G + + +I++ L K A
Sbjct: 106 IGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIA 165
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
+ +K+ G DV Y +M L + + L M G+ P+ V YN L
Sbjct: 166 REFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLH 225
Query: 253 GLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
L CK G + RA LM M EPN T+N L
Sbjct: 226 AL---------------------------CKNGKVGRARSLMSEMK----EPNDVTFNIL 254
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
I+A+C + ++ +M + + G +P VT ++ C ++ +A+ +L + +KG
Sbjct: 255 ISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG 314
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
D+ N LV G+C G A+ M++ G LP+ TY +++ G A+
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ----AKGLKIDVFTYTIMV 488
+ +++ + + ++ ++ GL GR D + +Q G +ID Y ++
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCVI 432
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
G +E +DA + L+ ME+ D ++ L L +G + + M G+G
Sbjct: 433 YGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLI--SLCEKGGMDDLKTAYDQMIGEGGV 490
Query: 549 ADATTTELLINFFS 562
+ LI+ +S
Sbjct: 491 PSIIVSHCLIHRYS 504
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/363 (20%), Positives = 136/363 (37%), Gaps = 84/363 (23%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTD----- 121
PN F +LI+ + ++ L+++ SLG D T T V+ LC R
Sbjct: 246 PNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEV 305
Query: 122 --------------------LGFCVLGLMF----------KMGLEPDIVTLTTIVNGLCA 151
G+C LG M + G P++ T ++ G C
Sbjct: 306 LERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCD 365
Query: 152 EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEG----RGFKF 207
G ++ AL M R N T +I GL G T + + ++ G +
Sbjct: 366 VGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARI 425
Query: 208 DVPVYTAI--------------------------------MDSLCKDGLVNEALGLWSEM 235
D P I + SLC+ G +++ + +M
Sbjct: 426 D-PYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQM 484
Query: 236 TGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMPDVHTFSAIVDNYCKEG 285
G+G P ++ +CL + GK+ + +G +P TF+A++ +CK+
Sbjct: 485 IGEGGVPSIIVSHCLIHR--YSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQD 542
Query: 286 MIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYN 345
+ + + MA G P+ +YN L+ C++ +Q A ++ M+ K +P ++
Sbjct: 543 KVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWS 602
Query: 346 TLI 348
+L+
Sbjct: 603 SLM 605
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 16/212 (7%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
++L M+D TV A I + +I K + A+ + +M L
Sbjct: 409 KILEMMQDSDTVHGA--------------RIDPYNCVIYGFYKENRWEDALEFLLKMEKL 454
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
A +F ++ LC D M G P I+ +++ G +E++
Sbjct: 455 FPRAVDRSFKLI--SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEES 512
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L L M GY S T A+I G CK I + + + RG D Y +++
Sbjct: 513 LELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEE 572
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL 250
LC G + +A L+S M K I PD ++ L
Sbjct: 573 LCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSL 604
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 148/314 (47%), Gaps = 28/314 (8%)
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK 264
+K Y ++ SL + GLV E L++EM L+
Sbjct: 116 YKLTPKCYNNLLSSLARFGLVEEMKRLYTEM---------------------------LE 148
Query: 265 KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQD 324
+ PD++TF+ +V+ YCK G + A++ + ++ + G +P+ FTY S I HC + ++
Sbjct: 149 DLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDA 208
Query: 325 AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
A KV+ M GC + V+Y LI+G + KK+D+A+SLL +M + P++ T+ L+
Sbjct: 209 AFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
C +G A L M + G PD Y +++ EA L + + L
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
++ Y+ ++ G C + A S + + L D+ TY ++ G C G LD A +LL
Sbjct: 329 NVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Query: 505 MDMEEKGCPPNDCT 518
MEE G PN T
Sbjct: 388 SLMEESGLVPNQRT 401
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 34 TPK-RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLV 92
TPK LLSS+ V+ + +M P+I F L+N K+ + A V
Sbjct: 119 TPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYV 178
Query: 93 KRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAE 152
+ G + D FT+T I CR D F V M + G + V+ T ++ GL
Sbjct: 179 TWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEA 238
Query: 153 GNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVY 212
+++AL L ++M + N T+ +I+ LC G S A+ FK++ G K D +Y
Sbjct: 239 KKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY 298
Query: 213 TAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL----FHCSRG---KVLKK 265
T ++ S C ++EA GL M G+ P+V+TYN L +G H + G K+L++
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQ 358
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
++PD+ T++ ++ C G + A RL+ M G+ PN
Sbjct: 359 NLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 128/250 (51%), Gaps = 1/250 (0%)
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
YN+L+++ +++ ++Y M+ P T+NTL++G+CK+ + +A + ++
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
G PD T+ + + G C+ AA ++ M ++G + ++Y ++ GLF+
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
EA+SL +++ N ++ Y++++D LC G+ +A F + G+K D YT+++
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
Q C LD+A LL M E G PN TYN ++G ++ ++ ++ L M +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLV 361
Query: 549 ADATTTELLI 558
D T LI
Sbjct: 362 PDLITYNTLI 371
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
+L+ + + K +D A+ KM N PN++ +TVLI+ + + A++L K+M
Sbjct: 230 QLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSES 289
Query: 99 GIEADSFTFTIVINCLCRLSRTD-------------------------LGFC------VL 127
GI+ D +T++I C D GFC +
Sbjct: 290 GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAM 349
Query: 128 GLMFKM---GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
GL+ KM L PD++T T++ G C+ GN++ A L M+E G N T
Sbjct: 350 GLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 2/156 (1%)
Query: 414 YAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
Y +L L + E LY E+ + + I ++ +++G C G + +A+++ + L
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 474 AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDIS 533
G D FTYT + G CR +D A ++ +M + GC N+ +Y + GL I
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 534 RSEKYLQLMKGKGFSADATTTELLINFF--SGNKAD 567
+ L MK + T +LI+ SG K++
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSE 278
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 127/493 (25%), Positives = 215/493 (43%), Gaps = 68/493 (13%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAA--INPFPNIKE-FTVLINLVVKMKHYTTAISLVKRM 95
+++ MR K V+ ++ F+ A N + + + F ++ +V + A L+ RM
Sbjct: 18 QVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRM 77
Query: 96 HSLGIEADSFTFTIVINCLCR-LSRTDLGFCVLGLMFKM---GLEPDIVTLTTIVNGLCA 151
IE + I+++ +CR R F L + KM +P T++ L
Sbjct: 78 K---IENCVVSEDILLS-ICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVE 133
Query: 152 EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKV-GNTSAAIGYFKKVEGRGFKFDVP 210
E + A M E+G + +I LC+ G A + F ++ RG D
Sbjct: 134 ENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSY 193
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPD 270
Y ++ LC+ G ++EA L++EM K P VVTY L GL
Sbjct: 194 TYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL---------------- 237
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
C + A R + M G+EPNVFTY+SL++ C + AM++++
Sbjct: 238 -----------CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFE 286
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
M+ +GC P+ VTY TLI G CK +K+ +A+ LL M +GL PD + ++ GFC
Sbjct: 287 MMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAIS 346
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
A + M G P+R+T+ I H+ +
Sbjct: 347 KFREAANFLDEMILGGITPNRLTWNI----------------------------HVKTSN 378
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
++ GLC+ A + ++++G+ ++V T +V+ LC++G A QL+ ++
Sbjct: 379 EVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTD 437
Query: 511 GCPPNDCTYNLFV 523
GC P+ T+ L +
Sbjct: 438 GCIPSKGTWKLLI 450
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 150/288 (52%), Gaps = 1/288 (0%)
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
GI P++ T + +V CK+ I A +++ + +G+ PN+ TY +++ + + M+ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
+V + M+ +G P TY L+ G+CK+ + +A +++ +M + P+ T+ ++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
CK A+ + M + +PD ++D L + H EA L+R++ K N
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
+ S ++ LC GR+ +AR+ F + KG + TY ++ G+C +G L +A +L
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
DM E+ C PN TYN+ ++GL + G++ + L+ M G + TT
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTT 472
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 181/364 (49%), Gaps = 19/364 (5%)
Query: 68 NIKEFTVLINLVVKMKHYTTAISLVKR-MHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
+++ L+N++++ + + ++ K S GI + FT +++ LC+ + + + V
Sbjct: 154 SVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKV 213
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L + MGL P++VT TTI+ G A G++E A + M + G+ ++ T+ +++G CK
Sbjct: 214 LDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCK 273
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD--- 243
+G S A +E + + Y ++ +LCK+ EA ++ EM + PD
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Query: 244 ---VVTYNCLTR------GLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLM 294
V+ C GL+ K+LK MPD S ++ CKEG + A +L
Sbjct: 334 CCKVIDALCEDHKVDEACGLWR----KMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLF 389
Query: 295 GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
+ G P++ TYN+LI C + ++ +A +++D M + C P+ TYN LI G K
Sbjct: 390 DEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKN 448
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
+ + + +L EM+ G P+ T+ L G K G A +++S +G++ D+ ++
Sbjct: 449 GNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKESW 507
Query: 415 AIIL 418
+ L
Sbjct: 508 ELFL 511
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 192/424 (45%), Gaps = 54/424 (12%)
Query: 153 GNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKV-EGRGFKFDVPV 211
G E ++ + +R+ + G + + + ++N L + FK E G ++
Sbjct: 134 GRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFT 193
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------K 261
++ +LCK + A + E+ G+ P++VTY + G + +RG +
Sbjct: 194 CNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGG--YVARGDMESAKRVLEE 251
Query: 262 VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
+L +G PD T++ ++D YCK G + A +M M + +EPN TY +I A C + +
Sbjct: 252 MLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKK 311
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
+A ++D M+ + +P + +I C+ K+D+A L +M+ PD +
Sbjct: 312 SGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
L+ CK G R+T EA L+ E EK +
Sbjct: 372 LIHWLCKEG--------------------RVT---------------EARKLFDEFEKGS 396
Query: 442 LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE 501
+ +T Y+ ++ G+C G L +A + + + K + FTY ++++GL + G + +
Sbjct: 397 IPSLLT-YNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGV 455
Query: 502 QLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQL--MKGKGFSADATTTELLIN 559
++L +M E GC PN T+ + +GL + G + K + + M GK D + EL +
Sbjct: 456 RVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGK---VDKESWELFLK 512
Query: 560 FFSG 563
F+G
Sbjct: 513 KFAG 516
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 161/359 (44%), Gaps = 22/359 (6%)
Query: 56 FFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLC 115
F N + PNI +L+ + K +A ++ + S+G+ + T+T ++
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYV 237
Query: 116 RLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSY 175
+ VL M G PD T T +++G C G +A + M++ N
Sbjct: 238 ARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEV 297
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
T+G +I LCK + A F ++ R F D + ++D+LC+D V+EA GLW +M
Sbjct: 298 TYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKM 357
Query: 236 TGKGIQPDVVTYNCLTRGLFH--CSRGKV---------LKKGIMPDVHTFSAIVDNYCKE 284
PD N L L H C G+V +KG +P + T++ ++ C++
Sbjct: 358 LKNNCMPD----NALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEK 413
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G + A RL M +PN FTYN LI +++ ++V + M+ GC P+ T+
Sbjct: 414 GELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTF 473
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC----KAGMPLAAKELI 399
L G K+ K + AM ++ V G D +W + F K +PL KEL+
Sbjct: 474 LILFEGLQKLGKEEDAMKIVSMAVMNGKV-DKESWELFLKKFAGELDKGVLPL--KELL 529
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 137/264 (51%), Gaps = 1/264 (0%)
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
G+ PN+FT N L+ A C ++ ++ A KV D + G +P+ VTY T++ G+ M+ A
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
+L EM+++G PD T+ L+ G+CK G A ++ M+K+ P+ +TY +++
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
L K EA +++ E+ + + ++ ++D LC ++ +A + + D
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
+ ++ LC+EG + +A +L D EKG P+ TYN + G+ +G+++ + +
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLF-DEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 541 LMKGKGFSADATTTELLINFFSGN 564
M + +A T +LI S N
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKN 448
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 27/354 (7%)
Query: 96 HSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV 155
H+ I DS + +IVINCL + ++ D+ +L + + GL P + I+ G+C EG
Sbjct: 431 HNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRS 490
Query: 156 EQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
E++L L M + G + +T I L + + A+ KK+ GF+ + T +
Sbjct: 491 EESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFL 550
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFS 275
+ LC++G +A ++ G+G +V GL + +G+ + F
Sbjct: 551 VKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGL-------IKNEGVDRGLELFR 603
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK 335
I N G P+V Y+ LI A C + +A +++ M+ K
Sbjct: 604 DICAN--------------------GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSK 643
Query: 336 GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAA 395
G P+ TYN++I GWCK ++D+ +S + M PD+ T+ +L+ G C +G P A
Sbjct: 644 GLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEA 703
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
+ M+ P+RIT+ ++ GL KC + EA+ +RE+E+ ++ +Y
Sbjct: 704 IFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 125/552 (22%), Positives = 229/552 (41%), Gaps = 34/552 (6%)
Query: 50 VDAAVDFFNKMAAINP-FPNIKEFTVLINLVVKMKHYTTAISLV----KRMHSLGIEADS 104
VD A F+++ + PN + L+ + K ++++ LV K M G D
Sbjct: 157 VDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSN--SSSVELVEARLKEMRDCGFHFDK 214
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR 164
FT T V+ C +++ V + G + ++ T +V C G V++A L
Sbjct: 215 FTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEM 273
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
++E R N T+ +I+G K A F+K+ G D+ +Y ++ LCK
Sbjct: 274 LEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKD 333
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT------FSAIV 278
+ AL L+ E+ GI PD L S + + I+ D+ + ++
Sbjct: 334 LEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLF 393
Query: 279 DNYCKEGMIARA----ERLMGFMARVGVE--------------PNVFTYNSLINAHCLQD 320
+ + + ++ A + LMG GV P+ + + +IN +
Sbjct: 394 EGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKAN 453
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
++ A+ + ++ G +P + YN +I G CK + ++++ LLGEM + G+ P T N
Sbjct: 454 KVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN 513
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
+ G + + A +L+ M+ +G P ++ L + +A ++
Sbjct: 514 CIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGE 573
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
H+ + +DGL + E F + A G DV Y ++++ LC+ +A
Sbjct: 574 GFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEA 633
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
+ L +M KG P TYN + G + G+I R + M + D T LI+
Sbjct: 634 DILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHG 693
Query: 561 F--SGNKADNTF 570
SG ++ F
Sbjct: 694 LCASGRPSEAIF 705
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/512 (23%), Positives = 204/512 (39%), Gaps = 38/512 (7%)
Query: 73 TVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFK 132
T+L+ K A L++ + I + T+ ++I+ + SR D F + M +
Sbjct: 252 TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRR 311
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
MG+ DI ++ GLC ++E AL L + + G + G + LC S
Sbjct: 312 MGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKL---LCSFSEESE 368
Query: 193 AIGYFKKVEGRGFKFDVPV-YTAIMDSLCKDGLVNEALGLWSEMTG-------------- 237
+ + G K V + Y ++ + ++ LV+EA + G
Sbjct: 369 LSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL 428
Query: 238 ----KGIQPDV----VTYNCLTRG--------LFHCSRGKVLKKGIMPDVHTFSAIVDNY 281
K I PD + NCL + L H +++ G++P ++ I++
Sbjct: 429 KDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLH----DIVQNGLIPGPMMYNNIIEGM 484
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
CKEG + +L+G M GVEP+ FT N + + A+ + M + G P
Sbjct: 485 CKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWI 544
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
L+ C+ + A L ++ +G + A + G K EL
Sbjct: 545 KHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRD 604
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
+ +G PD I Y +++ L K EA L+ E+ L + Y+ M+DG C G
Sbjct: 605 ICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGE 664
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNL 521
+ + DV TYT ++ GLC G +A +M+ K C PN T+
Sbjct: 665 IDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMA 724
Query: 522 FVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
+QGL + G + Y + M+ K D+
Sbjct: 725 LIQGLCKCGWSGEALVYFREMEEKEMEPDSAV 756
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 147/318 (46%), Gaps = 8/318 (2%)
Query: 66 FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFC 125
P+ +++IN +VK A++L+ + G+ + +I +C+ R++
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLK 495
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
+LG M G+EP TL I L + AL L +M G+ ++ LC
Sbjct: 496 LLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLC 555
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
+ G A Y V G GF + TA +D L K+ V+ L L+ ++ G PDV+
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 246 TYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
Y+ L + L R +++ KG+ P V T+++++D +CKEG I R + M
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
P+V TY SLI+ C + +A+ ++ M K C P+ +T+ LI G CK
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWS 735
Query: 358 DKAMSLLGEMVNKGLTPD 375
+A+ EM K + PD
Sbjct: 736 GEALVYFREMEEKEMEPD 753
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
VD ++ F + A P++ + VLI + K A L M S G++ T+
Sbjct: 595 VDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNS 654
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM- 168
+I+ C+ D G + M++ PD++T T++++GLCA G +A+ R +EM
Sbjct: 655 MIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAI---FRWNEMK 711
Query: 169 GYRC--NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
G C N T A+I GLCK G + A+ YF+++E + + D VY +++ S +N
Sbjct: 712 GKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENIN 771
Query: 227 EALGLWSEMTGKGIQPDVVTYN 248
G++ EM KG P V N
Sbjct: 772 AGFGIFREMVHKGRFPVSVDRN 793
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 88/175 (50%)
Query: 73 TVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFK 132
T I+ ++K + + L + + + G D + ++I LC+ RT + M
Sbjct: 583 TAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVS 642
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
GL+P + T ++++G C EG +++ L +RM E + T+ ++I+GLC G S
Sbjct: 643 KGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSE 702
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
AI + +++G+ + + A++ LCK G EAL + EM K ++PD Y
Sbjct: 703 AIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVY 757
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 115/274 (41%), Gaps = 12/274 (4%)
Query: 85 YTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTT 144
+ A+ L+K+M G E T ++ LC R L + G +V T
Sbjct: 525 FVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTA 584
Query: 145 IVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG 204
++GL V++ L L + G+ + + +I LCK T A F ++ +G
Sbjct: 585 AIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKG 644
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK 264
K V Y +++D CK+G ++ L M PDV+TY L GL C+ G+ +
Sbjct: 645 LKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGL--CASGRPSE 702
Query: 265 ----------KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
K P+ TF A++ CK G A M +EP+ Y SL++
Sbjct: 703 AIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVS 762
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
+ + + ++ M++KG P +V N ++
Sbjct: 763 SFLSSENINAGFGIFREMVHKGRFPVSVDRNYML 796
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 113/268 (42%), Gaps = 10/268 (3%)
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
G +++ YN++ + Q + ++ C S + I +D+A
Sbjct: 101 GYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEA 160
Query: 361 MSLLGEMVNKGL-TPDICTWNALVGGFCKAGMPLAAKELIST----MQKHGQLPDRITYA 415
S+ + GL P+ T+N L+ K+ ++ EL+ M+ G D+ T
Sbjct: 161 SSVFDRVREMGLCVPNAYTYNCLLEAISKSNS--SSVELVEARLKEMRDCGFHFDKFTLT 218
Query: 416 IILDGLFKCHFYPEAVSLYRE-LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
+L A+S++ E L + LD HI+ +I++ C +G++ A E L+
Sbjct: 219 PVLQVYCNTGKSERALSVFNEILSRGWLDEHIS--TILVVSFCKWGQVDKAFELIEMLEE 276
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
+ ++++ TY +++ G +E +D A QL M G + Y++ + GL + D+
Sbjct: 277 RDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEM 336
Query: 535 SEKYLQLMKGKGFSADATTTELLINFFS 562
+ +K G D L+ FS
Sbjct: 337 ALSLYLEIKRSGIPPDRGILGKLLCSFS 364
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 154/323 (47%), Gaps = 11/323 (3%)
Query: 106 TFTIVINCLCRLSRTDLGFC--VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
TF I+++ CR + + VL LM GLEPD VT V LC G V++A L
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGR-GFKFDVPVYTAIMDSLCKD 222
+ E ++YT+ ++ LCK + + ++ K D+ +T ++D++C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 223 GLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTF 274
+ EA+ L S++ G +PD YN + +G S+G K+ ++G+ PD T+
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+ ++ K G + A + M G EP+ TY SL+N C + + A+ + + M
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
+GC P+ TYNTL+HG CK + MDK M L M + G+ + + LV K+G
Sbjct: 364 RGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAE 423
Query: 395 AKELISTMQKHGQLPDRITYAII 417
A E+ L D Y+ +
Sbjct: 424 AYEVFDYAVDSKSLSDASAYSTL 446
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 137/280 (48%), Gaps = 11/280 (3%)
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK---------GIM 268
SLC+ G V+EA L E+T K PD TYN L + L C V+ + +
Sbjct: 168 SLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK 227
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
PD+ +F+ ++DN C + A L+ + G +P+ F YN+++ C + +A+ V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
Y M +G P +TYNTLI G K ++++A L MV+ G PD T+ +L+ G C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G L A L+ M+ G P+ TY +L GL K + + LY ++ +
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG 407
Query: 449 YSIMLDGLCSYGRLKDAREFFS-GLQAKGLKIDVFTYTIM 487
Y+ ++ L G++ +A E F + +K L D Y+ +
Sbjct: 408 YATLVRSLVKSGKVAEAYEVFDYAVDSKSLS-DASAYSTL 446
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 142/293 (48%), Gaps = 3/293 (1%)
Query: 269 PDVHTFSAIVDNYCK--EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
P TF ++ + C+ + I+ R++ M G+EP+ T + + + C ++ +A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGG 385
+ + K P T TYN L+ CK K + + EM + + PD+ ++ L+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
C + A L+S + G PD Y I+ G EAV +Y+++++ ++
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
Y+ ++ GL GR+++AR + + G + D TYT ++ G+CR+G A LL
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLE 359
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
+ME +GC PNDCTYN + GL + + + + ++MK G ++ L+
Sbjct: 360 EMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLV 412
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 154/376 (40%), Gaps = 38/376 (10%)
Query: 186 KVGNTSAAIGYFKKVEGRG-FKFDVPVYTAIMDSLCKDGLVNEALGLWSEM--TGKGIQP 242
K N S A F + D+ + +++ S +VN+ + L+ + + +P
Sbjct: 61 KSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRP 120
Query: 243 DVVTYNCLTRGLFHCSRGK-------------VLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
T+ L L H R ++ G+ PD T V + C+ G +
Sbjct: 121 GRSTFLIL---LSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAHC----------LQDQMQDAMKVYDSMIYKGCLP 339
A+ LM + P+ +TYN L+ C D+M+D V P
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK---------P 228
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
V++ LI C K + +AM L+ ++ N G PD +N ++ GFC A +
Sbjct: 229 DLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVY 288
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
M++ G PD+ITY ++ GL K EA + + + Y+ +++G+C
Sbjct: 289 KKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRK 348
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
G A ++A+G + TY ++ GLC+ L+D +L M+ G Y
Sbjct: 349 GESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGY 408
Query: 520 NLFVQGLLRRGDISRS 535
V+ L++ G ++ +
Sbjct: 409 ATLVRSLVKSGKVAEA 424
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 102/196 (52%), Gaps = 2/196 (1%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ FT+LI+ V K+ A+ LV ++ + G + D F + ++ C LS+ V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M + G+EPD +T T++ GL G VE+A M + GY ++ T+ +++NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G + A+ +++E RG + Y ++ LCK L+++ + L+ M G++ +
Sbjct: 348 KGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNG 407
Query: 247 YNCLTRGLFHCSRGKV 262
Y L R L GKV
Sbjct: 408 YATLVRSLVKS--GKV 421
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 2/184 (1%)
Query: 86 TTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTI 145
+ A+ + K+M G+E D T+ +I L + R + L M G EPD T T++
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 146 VNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGF 205
+NG+C +G AL L M+ G N T+ +++GLCK + ++ ++ G
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Query: 206 KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK 265
K + Y ++ SL K G V EA ++ D Y+ L L + K ++
Sbjct: 402 KLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTLETTLKWLKKAK--EQ 459
Query: 266 GIMP 269
G++P
Sbjct: 460 GLVP 463
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 172/360 (47%), Gaps = 14/360 (3%)
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV-------- 262
++ +M +V +A+ + EM G++PD + CL L C G V
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDAL--CKNGSVKEASKVFE 226
Query: 263 -LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
+++ P++ F++++ +C+EG + A+ ++ M G+EP++ + +L++ + +
Sbjct: 227 DMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGK 286
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI-KKMDKAMSLLGEMVNKGLTPDICTWN 380
M DA + + M +G P+ Y LI C+ K+MD+AM + EM G DI T+
Sbjct: 287 MADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYT 346
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
AL+ GFCK GM ++ M+K G +P ++TY I+ K + E + L ++++
Sbjct: 347 ALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRR 406
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ IY++++ C G +K+A ++ ++A GL V T+ IM+ G +G L +A
Sbjct: 407 GCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Query: 501 EQLLMDMEEKG--CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
+M +G P T + L+R + ++ + K S + + I
Sbjct: 467 CNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTI 526
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 199/406 (49%), Gaps = 18/406 (4%)
Query: 135 LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAI 194
+EP++ ++ + V++A+ + M + G + Y G +++ LCK G+ A
Sbjct: 165 IEPEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 195 GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
F+ + + F ++ +T+++ C++G + EA + +M G++PD+V + L G
Sbjct: 223 KVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGY 281
Query: 255 FHCSR--------GKVLKKGIMPDVHTFSAIVDNYCK-EGMIARAERLMGFMARVGVEPN 305
H + + K+G P+V+ ++ ++ C+ E + A R+ M R G E +
Sbjct: 282 AHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEAD 341
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
+ TY +LI+ C + V D M KG +PS VTY ++ K ++ ++ + L+
Sbjct: 342 IVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIE 401
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
+M +G PD+ +N ++ CK G A L + M+ +G P T+ I+++G
Sbjct: 402 KMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Query: 426 FYPEAVSLYRELEKMNL---DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK--GLKID 480
F EA + ++E+ + ++ T+ S+ L+ L +L+ A++ +S + K +++
Sbjct: 462 FLIEACNHFKEMVSRGIFSAPQYGTLKSL-LNNLVRDDKLEMAKDVWSCISNKTSSCELN 520
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
V +TI + L +G + +A +DM E P TY ++GL
Sbjct: 521 VSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 151/300 (50%), Gaps = 6/300 (2%)
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
I P++ F ++ + M+ +A ++ M + G+EP+ + + L++A C +++A
Sbjct: 165 IEPEL--FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEAS 222
Query: 327 KVYDSMIYKGCLPSTVTYNT-LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
KV++ M K P + Y T L++GWC+ K+ +A +L +M GL PDI + L+ G
Sbjct: 223 KVFEDMREK--FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSG 280
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH-FYPEAVSLYRELEKMNLDR 444
+ AG A +L++ M+K G P+ Y +++ L + EA+ ++ E+E+ +
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEA 340
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
I Y+ ++ G C +G + ++ KG+ TY ++ ++ ++ +L+
Sbjct: 341 DIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELI 400
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGN 564
M+ +GC P+ YN+ ++ + G++ + + M+ G S T ++IN F+
Sbjct: 401 EKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQ 460
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 194/461 (42%), Gaps = 61/461 (13%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPF---PNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
+LS MR V ++ +M NP P + F VL+ A+ ++ M
Sbjct: 140 ILSKMRQFGAVWGLIE---EMRKTNPELIEPEL--FVVLMRRFASANMVKKAVEVLDEMP 194
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
G+E D + F +++ LC+ V M + P++ T+++ G C EG +
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLLYGWCREGKLM 253
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+A + ++M E G + +++G G + A + RGF+ +V YT ++
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 217 DSLCK-DGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKK 265
+LC+ + ++EA+ ++ EM G + D+VTY L G C G + KK
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGF--CKWGMIDKGYSVLDDMRKK 371
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
G+MP T+ I+ + K+ L+ M R G P++ YN +I C ++++A
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL--TPDICTWNALV 383
+++++ M G P T+ +I+G+ + +A + EMV++G+ P T +L+
Sbjct: 432 VRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLL 491
Query: 384 GGFCKAGMPLAAKELIS-------------------------------------TMQKHG 406
+ AK++ S M +
Sbjct: 492 NNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMD 551
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
+P TYA ++ GL K + A + ++ KM +R ++
Sbjct: 552 LMPQPNTYAKLMKGLNKLYNRTIAAEITEKVVKMASEREMS 592
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 170/370 (45%), Gaps = 18/370 (4%)
Query: 138 DIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG-Y 196
D+ ++GL A + A + MD++ ++ T +I L K G ++ +
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL------ 250
F+K+ +G K+ V+ ++ S C +GL EAL + +EM KGI+ + + YN L
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 251 ------TRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
GLF R K G+ P T++ ++D Y + E L+ M +G+EP
Sbjct: 392 SNHIEEVEGLFTEMRDK----GLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447
Query: 305 NVFTYNSLINAHCLQDQMQD-AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
NV +Y LI+A+ +M D A + M G PS+ +Y LIH + +KA +
Sbjct: 448 NVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
EM +G+ P + T+ +++ F ++G E+ M + RITY +LDG K
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
Y EA + E KM L + Y+++++ G+ + + A LK D T
Sbjct: 568 QGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSIT 627
Query: 484 YTIMVQGLCR 493
Y+ M+ R
Sbjct: 628 YSTMIYAFVR 637
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/375 (22%), Positives = 166/375 (44%), Gaps = 10/375 (2%)
Query: 66 FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLG-F 124
F +++ + I+ + + Y A + + M + + D+ T I+I L + R+ +
Sbjct: 270 FRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVW 329
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
+ M + G++ +V C EG E+AL + M++ G R N+ + +++
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
K + G F ++ +G K Y +MD+ + + L EM G++P+V
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 245 VTYNCLTRGLFHCSRG---------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
+Y CL + ++ K G+ P H+++A++ Y G +A
Sbjct: 450 KSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFE 509
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
M + G++P+V TY S+++A M+++ M+ + + +TYNTL+ G+ K
Sbjct: 510 EMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Query: 356 KMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYA 415
+A ++ E GL P + T+N L+ + + G +L+ M PD ITY+
Sbjct: 570 LYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYS 629
Query: 416 IILDGLFKCHFYPEA 430
++ + + A
Sbjct: 630 TMIYAFVRVRDFKRA 644
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 160/364 (43%), Gaps = 10/364 (2%)
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG------- 260
DV +Y A + L ++A ++ M + PD VT L L R
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 261 --KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCL 318
K+ +KG+ F +V ++C EG+ A + M + G+ N YN+L++A+
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
+ +++ ++ M KG PS TYN L+ + + + D +LL EM + GL P++ +
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 379 WNALVGGFCKAG-MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
+ L+ + + M A + M+K G P +Y ++ ++ +A + + E+
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLL 497
K + + Y+ +LD G E + + + +K TY ++ G ++GL
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 498 DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
+A ++ + + G P+ TYN+ + R G ++ + L+ M D+ T +
Sbjct: 572 IEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTM 631
Query: 558 INFF 561
I F
Sbjct: 632 IYAF 635
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 145/315 (46%), Gaps = 34/315 (10%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+ L++ K H L M G++ + T+ I+++ R + D+ +L M
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLA----MRMDEMGYRCNSYTHGAIINGLCKV 187
+GLEP++ + T +++ A G ++ +A +RM ++G + +S+++ A+I+
Sbjct: 442 DLGLEPNVKSYTCLIS---AYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
G A F+++ G K V YT+++D+ + G + + +W M + I+ +TY
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 248 NCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVF 307
N L +D + K+G+ A ++ +++G++P+V
Sbjct: 559 NTL---------------------------LDGFAKQGLYIEARDVVSEFSKMGLQPSVM 591
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
TYN L+NA+ Q ++ M P ++TY+T+I+ + +++ +A M
Sbjct: 592 TYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMM 651
Query: 368 VNKGLTPDICTWNAL 382
V G PD ++ L
Sbjct: 652 VKSGQVPDPRSYEKL 666
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 128/299 (42%), Gaps = 10/299 (3%)
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA-HCLQDQMQDAMKV 328
DV ++A + A + M ++ V P+ T LI ++ ++
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
++ M KG S + L+ +C ++A+ + EM KG+ + +N L+ + K
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV-SLYRELEKMNLDRHIT 447
+ + L + M+ G P TY I++D + P+ V +L RE+E + L+ ++
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDA-YARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 448 IYSIMLDGLCSYGRLKD----AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
Y+ ++ +YGR K A + F ++ GLK +YT ++ G + A
Sbjct: 451 SYTCLI---SAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+M ++G P+ TY + R GD + + +LM + T L++ F+
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA 566
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
L+S + + D Y + GL Y +A +Y ++K+N+ +I++ L
Sbjct: 260 LLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLR 319
Query: 458 SYGR-LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
GR K+ E F + KG+K + +V+ C EGL ++A + +ME+KG N
Sbjct: 320 KAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNT 379
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
YN + + I E M+ KG A T +L++ ++
Sbjct: 380 IVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 90/209 (43%), Gaps = 1/209 (0%)
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
D + LL + +K D+ +NA + G + A E+ M K PD +T AI+
Sbjct: 255 DYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAIL 314
Query: 418 LDGLFKC-HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
+ L K E ++ ++ + + ++ ++ C G ++A + ++ KG
Sbjct: 315 ITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKG 374
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
++ + Y ++ + +++ E L +M +KG P+ TYN+ + RR E
Sbjct: 375 IRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVE 434
Query: 537 KYLQLMKGKGFSADATTTELLINFFSGNK 565
L+ M+ G + + LI+ + K
Sbjct: 435 TLLREMEDLGLEPNVKSYTCLISAYGRTK 463
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 82/206 (39%)
Query: 45 RDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADS 104
R K D A D F +M + P+ +T LI+ + A + + M GI+
Sbjct: 461 RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSV 520
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR 164
T+T V++ R T + LM + ++ +T T+++G +G +A +
Sbjct: 521 ETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSE 580
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
+MG + + T+ ++N + G + K++ K D Y+ ++ + +
Sbjct: 581 FSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRD 640
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCL 250
A M G PD +Y L
Sbjct: 641 FKRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 212/489 (43%), Gaps = 18/489 (3%)
Query: 41 LSSMRDLKTVDAAVDFFNKMAAINPFPNI-KEFTVLINLVVKMKHYTTAISLVKRMH-SL 98
LSS+ ++ +D F ++N F + KEF + ++ L K M +
Sbjct: 83 LSSLPPRGSIARCLDIFKNKLSLNDFALVFKEF-------AGRGDWQRSLRLFKYMQRQI 135
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
+ + +TI+I+ L R D V M G+ + + T ++N G E +
Sbjct: 136 WCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETS 195
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVG-NTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
L L RM + T+ +IN + G + +G F ++ G + D+ Y ++
Sbjct: 196 LELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMP 269
+ GL +EA ++ M GI PD+ TY+ L R G++ G +P
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
D+ +++ +++ Y K G I A + M G PN TY+ L+N + D +++
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
M P TYN LI + + + ++L +MV + + PD+ T+ ++ K
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
G+ A++++ M + +P Y +++ + Y EA+ + + ++ + I +
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETF 495
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
+L G +K++ S L G+ + T+ ++ + G ++A + +DME+
Sbjct: 496 HSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Query: 510 KGCPPNDCT 518
C P++ T
Sbjct: 556 SRCDPDERT 564
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 202/436 (46%), Gaps = 9/436 (2%)
Query: 136 EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG 195
+P+ T +++ L EG +++ L + M G + +++ A+IN + G ++
Sbjct: 138 KPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLE 197
Query: 196 YFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL-GLWSEMTGKGIQPDVVTYN-----C 249
+++ + Y ++++ + GL E L GL++EM +GIQPD+VTYN C
Sbjct: 198 LLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 250 LTRGLFHCSR---GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
RGL + + GI+PD+ T+S +V+ + K + + L+G MA G P++
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDI 317
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
+YN L+ A+ +++AM V+ M GC P+ TY+ L++ + + + D L E
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLE 377
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M + PD T+N L+ F + G L M + PD TY I+ K
Sbjct: 378 MKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGL 437
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+ +A + + + ++ Y+ +++ ++A F+ + G + T+
Sbjct: 438 HEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHS 497
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
++ R GL+ ++E +L + + G P N T+N ++ + G + K M+
Sbjct: 498 LLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR 557
Query: 547 FSADATTTELLINFFS 562
D T E +++ +S
Sbjct: 558 CDPDERTLEAVLSVYS 573
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 209/470 (44%), Gaps = 15/470 (3%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D ++ F++M + ++ +T LIN + Y T++ L+ RM + I T+
Sbjct: 157 LDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNT 216
Query: 110 VINCLCRLSRTDLGFCVLGLMFKM---GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
VIN R G +LGL +M G++PDIVT T+++ G ++A + M+
Sbjct: 217 VINACARGGLDWEG--LLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMN 274
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
+ G + T+ ++ K+ ++ G D+ Y ++++ K G +
Sbjct: 275 DGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIK 334
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM--------PDVHTFSAIV 278
EA+G++ +M G P+ TY+ L R +++ + PD T++ ++
Sbjct: 335 EAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILI 394
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+ + + G L M +EP++ TY +I A +DA K+ M +
Sbjct: 395 EVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIV 454
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
PS+ Y +I + + ++A+ M G P I T+++L+ F + G+ ++ +
Sbjct: 455 PSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAI 514
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+S + G +R T+ ++ + + EAV Y ++EK D +L + S
Sbjct: 515 LSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVL-SVYS 573
Query: 459 YGRLKDA-REFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
+ RL D RE F ++A + + Y +M+ + DD +LL +M
Sbjct: 574 FARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 131/293 (44%), Gaps = 2/293 (0%)
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMAR-VGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
++ F+ + + G R+ RL +M R + +PN Y +I+ + + ++V+
Sbjct: 105 LNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVF 164
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
D M +G S +Y LI+ + + + + ++ LL M N+ ++P I T+N ++ +
Sbjct: 165 DEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARG 224
Query: 390 GMPLAA-KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G+ L + M+ G PD +TY +L EA ++R + + +T
Sbjct: 225 GLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTT 284
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
YS +++ RL+ + + + G D+ +Y ++++ + G + +A + M+
Sbjct: 285 YSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQ 344
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
GC PN TY++ + + G + MK DA T +LI F
Sbjct: 345 AAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/389 (19%), Positives = 139/389 (35%), Gaps = 46/389 (11%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LL + ++ A+ F++M A PN ++VL+NL + Y L M S
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV-EQA 158
+ D+ T+ I+I + M + +EPD+ T I+ C +G + E A
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA-CGKGGLHEDA 441
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
+ M +S + +I + A+ F + G + + +++ S
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYS 501
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM--------PD 270
+ GLV E+ + S + GI + T+N + + K + PD
Sbjct: 502 FARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPD 561
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY--------------------- 309
T A++ Y ++ M + P++ Y
Sbjct: 562 ERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLE 621
Query: 310 ----NSLINAHCLQDQM-----------QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
N + N H + QM Q V D + +GC YN L+ +
Sbjct: 622 EMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWL 681
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALV 383
+ ++A +L E +GL P++ N LV
Sbjct: 682 GQKERAARVLNEATKRGLFPELFRKNKLV 710
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/484 (23%), Positives = 220/484 (45%), Gaps = 30/484 (6%)
Query: 46 DLKTVDAAVDFFNKMAAINPFPNIKEFTVL-------INLVVKMKHYTTAISLVKRMHSL 98
DL ++D DF +A +P N+K+F + N + K H+ + R L
Sbjct: 249 DLDSID---DFPKNGSAQSPV-NLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRL 304
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
+ TF +I+ + R + + M K G+ D VT T+++ G++ +A
Sbjct: 305 -----TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEA 359
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L +M+E G ++ T+ +++ G+ AA+ Y++K+ G D + A++
Sbjct: 360 ESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHI 419
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPD-----VVTYNCLTRGLFHCSRGKVLKKGIMPD--- 270
LC+ +V E + +EM I+ D V+ + GL + K L + D
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGL--VVQAKALFERFQLDCVL 477
Query: 271 -VHTFSAIVDNYCKEGMIARAERLM-GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
T +A++D Y ++G+ AE + G G +V YN +I A+ + A+ +
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+ M +G P TYN+L + +D+A +L EM++ G P T+ A++ + +
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G+ A +L M+K G P+ + Y +++G + EA+ +R +E+ + + +
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE-GLLDDAEQLLMDM 507
+ ++ G L++AR + ++ DV M+ LC + G++ +AE + +
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSML-SLCADLGIVSEAESIFNAL 716
Query: 508 EEKG 511
EKG
Sbjct: 717 REKG 720
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 181/419 (43%), Gaps = 18/419 (4%)
Query: 141 TLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKV 200
T T+++ G + A L M + G ++ T +I+ G+ S A KK+
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 201 EGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH--CS 258
E +G D Y ++ G + AL + ++ G+ PD VT+ R + H C
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTH----RAVLHILCQ 422
Query: 259 RGKVL----------KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFT 308
R V + I D H+ I+ Y EG++ +A+ L V + T
Sbjct: 423 RKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST-T 481
Query: 309 YNSLINAHCLQDQMQDAMKV-YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
++I+ + + +A V Y G + YN +I + K K +KA+SL M
Sbjct: 482 LAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGM 541
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
N+G PD CT+N+L + A+ +++ M G P TYA ++ +
Sbjct: 542 KNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLL 601
Query: 428 PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIM 487
+AV LY +EK + + +Y +++G G +++A ++F ++ G++ + T +
Sbjct: 602 SDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSL 661
Query: 488 VQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
++ + G L++A ++ M++ P+ N + G +S +E ++ KG
Sbjct: 662 IKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKG 720
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 120/552 (21%), Positives = 226/552 (40%), Gaps = 45/552 (8%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A KM P+ K + +L++L A+ +++ +G+ D+ T V++
Sbjct: 359 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
LC+ V+ M + + D ++ I+ EG V QA L R ++
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF-QLDCVL 477
Query: 173 NSYTHGAIINGLCKVG-NTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGL 231
+S T A+I+ + G A ++ K G + DV Y ++ + K L +AL L
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 232 WSEMTGKGIQPDVVTYNCLTRGLF------HCSR--GKVLKKGIMPDVHTFSAIVDNYCK 283
+ M +G PD TYN L + L R ++L G P T++A++ +Y +
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
G+++ A L M + GV+PN Y SLIN +++A++ + M G + +
Sbjct: 598 LGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIV 657
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
+LI + K+ +++A + +M + PD+ N+++ G+ A+ + + ++
Sbjct: 658 LTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALR 717
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
+ G D I++A ++ EA+ + E+ + L T ++ ++ + G+L
Sbjct: 718 EKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLS 776
Query: 464 DAREFFSG-LQAKGLKIDVFTYTIMVQGLCREGLLDDA-EQLLMDMEE------------ 509
+ E F L + L +D T+ + L + G+ +A QL E
Sbjct: 777 ECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITAT 836
Query: 510 ------------KGC--------PPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
+ C P YN + GDI + K M+ KG
Sbjct: 837 LFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEP 896
Query: 550 DATTTELLINFF 561
D T L+ +
Sbjct: 897 DIVTQAYLVGIY 908
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 189/457 (41%), Gaps = 35/457 (7%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V+A F+ K ++ E+ V+I K K + A+SL K M + G D T+
Sbjct: 496 VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+ L + D +L M G +P T ++ G + A+ L M++ G
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ N +G++ING + G AI YF+ +E G + + V T+++ + K G + EA
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKE-GMIA 288
++ +M PDV N + + C + G+++
Sbjct: 676 RVYDKMKDSEGGPDVAASNSML----------------------------SLCADLGIVS 707
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
AE + + G +V ++ +++ + + +A++V + M G L ++N ++
Sbjct: 708 EAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVM 766
Query: 349 HGWCKIKKMDKAMSLLGEM-VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
+ ++ + L EM V + L D T+ L K G+P E +S +Q
Sbjct: 767 ACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVP---SEAVSQLQTAYN 823
Query: 408 LPDRITYAIILDGLFKCH-FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
+ I LF Y A+ +EL + R Y+ ++ + G + A
Sbjct: 824 EAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMAL 883
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+ + +Q KGL+ D+ T +V + G+++ +++
Sbjct: 884 KAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRV 920
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 38/308 (12%)
Query: 289 RAERLMG----FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
R ER++ F + PNV YN ++ A + + + M + G LP+ TY
Sbjct: 124 RWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTY 183
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV----------------GGFCK 388
L+ + K + +A+ + M + PD T +V G+C
Sbjct: 184 GMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCA 243
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILD-GLFKC----------HFYPEAVSLYREL 437
+ L + I K+G + L LFK HF + S R+
Sbjct: 244 GKVDLDL-DSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRK- 301
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLL 497
R + ++ ++D GRL DA FS + G+ ID T+ M+ G L
Sbjct: 302 -----PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHL 356
Query: 498 DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
+AE LL MEEKG P+ TYN+ + GDI + +Y + ++ G D T +
Sbjct: 357 SEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAV 416
Query: 558 INFFSGNK 565
++ K
Sbjct: 417 LHILCQRK 424
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/399 (26%), Positives = 186/399 (46%), Gaps = 33/399 (8%)
Query: 135 LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAI 194
+EP++ +V + V++A+ + M + G+ + Y G +++ LCK G+ A
Sbjct: 181 IEPEL--FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 195 GYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
F+ + R F ++ +T+++ C+ G + EA + +M G +PD+V Y L G
Sbjct: 239 KLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG- 296
Query: 255 FHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
Y G +A A L+ M R G EPN Y LI
Sbjct: 297 --------------------------YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQ 330
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP 374
A C D+M++AMKV+ M C VTY L+ G+CK K+DK +L +M+ KGL P
Sbjct: 331 ALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMP 390
Query: 375 DICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLY 434
T+ ++ K EL+ M++ PD Y +++ K EAV L+
Sbjct: 391 SELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLW 450
Query: 435 RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL-KIDVF-TYTIMVQGLC 492
E+E+ L + + IM++GL S G L +A + F + +GL + + T +++ +
Sbjct: 451 NEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVL 510
Query: 493 REGLLDDAEQLLMDMEEKG-CPPNDCTYNLFVQGLLRRG 530
++ L+ A+ + + KG C N ++ +++ L +G
Sbjct: 511 KDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKG 549
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 173/381 (45%), Gaps = 24/381 (6%)
Query: 153 GNVEQALGLAMRMDEMGYR-----------CNSY-THGAIINGLCKVGNTSAAIGYFKKV 200
G +E+ L +GYR C+S + +++ L K+ A G +++
Sbjct: 114 GLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEM 173
Query: 201 EGRGFKFDVP-VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR 259
+ P ++ ++ +V +A+ + EM G +PD + CL L C
Sbjct: 174 RKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDAL--CKH 231
Query: 260 GKV---------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
G V ++ ++ F++++ +C+ G + A+ ++ M G EP++ Y
Sbjct: 232 GSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYT 291
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
+L++ + +M DA + M +G P+ Y LI CK+ +M++AM + EM
Sbjct: 292 NLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERY 351
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
D+ T+ ALV GFCK G ++ M K G +P +TY I+ K + E
Sbjct: 352 ECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEEC 411
Query: 431 VSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQG 490
+ L ++ ++ I IY++++ C G +K+A ++ ++ GL V T+ IM+ G
Sbjct: 412 LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMING 471
Query: 491 LCREGLLDDAEQLLMDMEEKG 511
L +G L +A +M +G
Sbjct: 472 LASQGCLLEASDHFKEMVTRG 492
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/431 (23%), Positives = 189/431 (43%), Gaps = 18/431 (4%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
++LS MR V ++ K P + F VL+ AI ++ M
Sbjct: 155 KILSKMRQFGAVWGLIEEMRKENPQLIEPEL--FVVLVQRFASADMVKKAIEVLDEMPKF 212
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
G E D + F +++ LC+ + M +M ++ T+++ G C G + +A
Sbjct: 213 GFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEA 271
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
+ ++M+E G+ + + +++G G + A + + RGF+ + YT ++ +
Sbjct: 272 KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQA 331
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIM 268
LCK + EA+ ++ EM + DVVTY L G C GK+ +KKG+M
Sbjct: 332 LCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGF--CKWGKIDKCYIVLDDMIKKGLM 389
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P T+ I+ + K+ LM M ++ P++ YN +I C ++++A+++
Sbjct: 390 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 449
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL--TPDICTWNALVGGF 386
++ M G P T+ +I+G + +A EMV +GL T L+
Sbjct: 450 WNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTV 509
Query: 387 CKAGMPLAAKELISTMQKHGQLP-DRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
K AK++ S + G + +++ I + LF + EA S E+ +M+
Sbjct: 510 LKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQ 569
Query: 446 ITIYSIMLDGL 456
++ ++ GL
Sbjct: 570 PDTFAKLMKGL 580
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 144/294 (48%), Gaps = 5/294 (1%)
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
I P++ F +V + M+ +A ++ M + G EP+ + + L++A C ++DA
Sbjct: 181 IEPEL--FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAA 238
Query: 327 KVYDSMIYKGCLPSTVTYNT-LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
K+++ M + P + Y T L++GWC++ KM +A +L +M G PDI + L+ G
Sbjct: 239 KLFEDMRMR--FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSG 296
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
+ AG A +L+ M++ G P+ Y +++ L K EA+ ++ E+E+ +
Sbjct: 297 YANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEAD 356
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
+ Y+ ++ G C +G++ + KGL TY ++ ++ ++ +L+
Sbjct: 357 VVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELME 416
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M + P+ YN+ ++ + G++ + + M+ G S T ++IN
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMIN 470
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 141/323 (43%), Gaps = 26/323 (8%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P+I ++T L++ A L++ M G E ++ +T++I LC++ R + V
Sbjct: 285 PDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKV 344
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M + E D+VT T +V+G C G +++ + M + G + T+ I+ K
Sbjct: 345 FVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEK 404
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+ + +K+ + D+ +Y ++ CK G V EA+ LW+EM G+ P V T
Sbjct: 405 KESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDT 464
Query: 247 YNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
+ + GL S+G +L+ ++ KE M+ R + +++ G
Sbjct: 465 FVIMINGL--ASQGCLLE-------------ASDHFKE-MVTRG---LFSVSQYG----- 500
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKG-CLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
T L+N +++ A V+ + KG C + +++ IH +A S
Sbjct: 501 -TLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCI 559
Query: 366 EMVNKGLTPDICTWNALVGGFCK 388
EM+ P T+ L+ G K
Sbjct: 560 EMIEMDFMPQPDTFAKLMKGLKK 582
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 7/235 (2%)
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG---LTPDICTWNALVGGFCKAGMPLAAK 396
S Y +++ K+++ L+ EM + + P++ LV F A M A
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFV--VLVQRFASADMVKKAI 203
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
E++ M K G PD + +LD L K +A L+ ++ +M ++ ++ +L G
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM-RMRFPVNLRYFTSLLYGW 262
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
C G++ +A+ + G + D+ YT ++ G G + DA LL DM +G PN
Sbjct: 263 CRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNA 322
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT-TELLINFFSGNKADNTF 570
Y + +Q L + + + K M+ AD T T L+ F K D +
Sbjct: 323 NCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCY 377
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 159/355 (44%), Gaps = 27/355 (7%)
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
A F +++ GF V A M SL G V+ AL + EM
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR---------------- 230
Query: 253 GLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
C I P+ +T + ++ YC+ G + + L+ M R+G +YN+L
Sbjct: 231 ---RCK--------ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
I HC + + A+K+ + M G P+ VT+NTLIHG+C+ K+ +A + GEM +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
P+ T+N L+ G+ + G A M +G D +TY ++ GL K +A
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
+EL+K NL + + +S ++ G C E + + G + T+ ++V C
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 493 REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
R D A Q+L +M + P + T + GL +G +K LQ M+GK F
Sbjct: 460 RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 152/340 (44%), Gaps = 8/340 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
F L +K + A +M G + ++ L R D+ M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ + P+ TL +++G C G +++ + L M+ +G+R ++ +I G C+ G S
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
+A+ + G + +V + ++ C+ + EA ++ EM + P+ VTYN L
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 252 RGLFHCSRGKVLKK--------GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
G ++ + GI D+ T++A++ CK+ +A + + + + +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
PN T+++LI C++ ++Y SMI GC P+ T+N L+ +C+ + D A +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
L EMV + + D T + + G G K+L+ M+
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%)
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
G +P V + +A + + +G + A R M R + PN +T N +++ +C ++
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
+++ M G + V+YNTLI G C+ + A+ L M GL P++ T+N L+ G
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
FC+A A ++ M+ P+ +TY +++G + + A Y ++ + R
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
I Y+ ++ GLC + + A +F L + L + T++ ++ G C D +L
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M GC PN+ T+N+ V R D + + L+ M + D+ T + N
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 150/350 (42%), Gaps = 27/350 (7%)
Query: 134 GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
G P + + ++ L +G V+ AL M N YT +++G C+ G
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 194 IGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
I + +E GF+ Y ++ C+ GL++ AL L + M
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG----------------- 300
Query: 254 LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLI 313
K G+ P+V TF+ ++ +C+ + A ++ G M V V PN TYN+LI
Sbjct: 301 ----------KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 314 NAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT 373
N + Q + A + Y+ M+ G +TYN LI G CK K KA + E+ + L
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 374 PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSL 433
P+ T++AL+ G C EL +M + G P+ T+ +++ + + A +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 434 YRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
RE+ + ++ + +GL G+ + ++ ++ K + F
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 133/269 (49%)
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M G P V + N+ +++ Q ++ A++ Y M P+ T N ++ G+C+ K
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+DK + LL +M G ++N L+ G C+ G+ +A +L + M K G P+ +T+
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++ G + EA ++ E++ +N+ + Y+ +++G G + A F+ + G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
++ D+ TY ++ GLC++ A Q + +++++ PN T++ + G R + R
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 537 KYLQLMKGKGFSADATTTELLINFFSGNK 565
+ + M G + T +L++ F N+
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 135/330 (40%), Gaps = 27/330 (8%)
Query: 41 LSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGI 100
+SS+ VD A+ F+ +M PN ++++ + I L++ M LG
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 101 EADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALG 160
A ++ +I C + +M K GL+P++VT T+++G C +++A
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 161 LAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
+ M + N+ T+ +ING + G+ A +++ + G + D+ Y A++ LC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDN 280
K +A E+ K+ ++P+ TFSA++
Sbjct: 390 KQAKTRKAAQFVKELD---------------------------KENLVPNSSTFSALIMG 422
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
C R L M R G PN T+N L++A C + A +V M+ +
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
+ T + + +G K LL EM K
Sbjct: 483 SRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 105/234 (44%), Gaps = 2/234 (0%)
Query: 327 KVYDSMIY--KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
KV+D+++Y + C + +++L + +KK A +M + G P + + NA +
Sbjct: 152 KVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 211
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
G A M++ P+ T +++ G + + + L +++E++
Sbjct: 212 SLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRA 271
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
Y+ ++ G C G L A + + + GL+ +V T+ ++ G CR L +A ++
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
+M+ PN TYN + G ++GD + ++ + M G D T LI
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 159/355 (44%), Gaps = 27/355 (7%)
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
A F +++ GF V A M SL G V+ AL + EM
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR---------------- 230
Query: 253 GLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
C I P+ +T + ++ YC+ G + + L+ M R+G +YN+L
Sbjct: 231 ---RCK--------ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
I HC + + A+K+ + M G P+ VT+NTLIHG+C+ K+ +A + GEM +
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNV 339
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
P+ T+N L+ G+ + G A M +G D +TY ++ GL K +A
Sbjct: 340 APNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQ 399
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
+EL+K NL + + +S ++ G C E + + G + T+ ++V C
Sbjct: 400 FVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFC 459
Query: 493 REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
R D A Q+L +M + P + T + GL +G +K LQ M+GK F
Sbjct: 460 RNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKF 514
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 152/340 (44%), Gaps = 8/340 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
F L +K + A +M G + ++ L R D+ M
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ + P+ TL +++G C G +++ + L M+ +G+R ++ +I G C+ G S
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
+A+ + G + +V + ++ C+ + EA ++ EM + P+ VTYN L
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 252 RGLFHCSRGKVLKK--------GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
G ++ + GI D+ T++A++ CK+ +A + + + + +
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
PN T+++LI C++ ++Y SMI GC P+ T+N L+ +C+ + D A +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
L EMV + + D T + + G G K+L+ M+
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%)
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
G +P V + +A + + +G + A R M R + PN +T N +++ +C ++
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
+++ M G + V+YNTLI G C+ + A+ L M GL P++ T+N L+ G
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHG 317
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
FC+A A ++ M+ P+ +TY +++G + + A Y ++ + R
Sbjct: 318 FCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRD 377
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
I Y+ ++ GLC + + A +F L + L + T++ ++ G C D +L
Sbjct: 378 ILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYK 437
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M GC PN+ T+N+ V R D + + L+ M + D+ T + N
Sbjct: 438 SMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCN 491
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 150/350 (42%), Gaps = 27/350 (7%)
Query: 134 GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
G P + + ++ L +G V+ AL M N YT +++G C+ G
Sbjct: 198 GFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKG 257
Query: 194 IGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
I + +E GF+ Y ++ C+ GL++ AL L + M
Sbjct: 258 IELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG----------------- 300
Query: 254 LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLI 313
K G+ P+V TF+ ++ +C+ + A ++ G M V V PN TYN+LI
Sbjct: 301 ----------KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 314 NAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT 373
N + Q + A + Y+ M+ G +TYN LI G CK K KA + E+ + L
Sbjct: 351 NGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLV 410
Query: 374 PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSL 433
P+ T++AL+ G C EL +M + G P+ T+ +++ + + A +
Sbjct: 411 PNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQV 470
Query: 434 YRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
RE+ + ++ + +GL G+ + ++ ++ K + F
Sbjct: 471 LREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQESFN 520
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 133/269 (49%)
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M G P V + N+ +++ Q ++ A++ Y M P+ T N ++ G+C+ K
Sbjct: 194 MKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGK 253
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+DK + LL +M G ++N L+ G C+ G+ +A +L + M K G P+ +T+
Sbjct: 254 LDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNT 313
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++ G + EA ++ E++ +N+ + Y+ +++G G + A F+ + G
Sbjct: 314 LIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNG 373
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
++ D+ TY ++ GLC++ A Q + +++++ PN T++ + G R + R
Sbjct: 374 IQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGF 433
Query: 537 KYLQLMKGKGFSADATTTELLINFFSGNK 565
+ + M G + T +L++ F N+
Sbjct: 434 ELYKSMIRSGCHPNEQTFNMLVSAFCRNE 462
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 135/330 (40%), Gaps = 27/330 (8%)
Query: 41 LSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGI 100
+SS+ VD A+ F+ +M PN ++++ + I L++ M LG
Sbjct: 210 MSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGF 269
Query: 101 EADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALG 160
A ++ +I C + +M K GL+P++VT T+++G C +++A
Sbjct: 270 RATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASK 329
Query: 161 LAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
+ M + N+ T+ +ING + G+ A +++ + G + D+ Y A++ LC
Sbjct: 330 VFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLC 389
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDN 280
K +A E+ K+ ++P+ TFSA++
Sbjct: 390 KQAKTRKAAQFVKELD---------------------------KENLVPNSSTFSALIMG 422
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
C R L M R G PN T+N L++A C + A +V M+ +
Sbjct: 423 QCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
+ T + + +G K LL EM K
Sbjct: 483 SRTVHQVCNGLKHQGKDQLVKKLLQEMEGK 512
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 105/234 (44%), Gaps = 2/234 (0%)
Query: 327 KVYDSMIY--KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
KV+D+++Y + C + +++L + +KK A +M + G P + + NA +
Sbjct: 152 KVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMS 211
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
G A M++ P+ T +++ G + + + L +++E++
Sbjct: 212 SLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRA 271
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
Y+ ++ G C G L A + + + GL+ +V T+ ++ G CR L +A ++
Sbjct: 272 TDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVF 331
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
+M+ PN TYN + G ++GD + ++ + M G D T LI
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI 385
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 218/479 (45%), Gaps = 15/479 (3%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
D + M N NI +LI + + LVK+ ++ +SFT+ +
Sbjct: 153 DRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKW---DLKMNSFTYKCL 209
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
+ R F V + + G + DI +++ L + E+A + M +
Sbjct: 210 LQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHC 266
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
R + YT+ +I + ++G A+G F ++ G +V Y +M L K +V++A+
Sbjct: 267 RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT-------FSAIVDNYCK 283
++S M G +P+ TY+ L L + G++++ + ++ +S +V K
Sbjct: 327 VFSRMVETGCRPNEYTYSLLLNLL--VAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSK 384
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
G ++ A RL M V+ +Y S++ + C + +A+++ + KG + T+
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
YNT+ K+K++ L +M G +PDI T+N L+ F + G A + ++
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
+ PD I+Y +++ L K EA ++E+++ L+ + YS +++ R++
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLF 522
A F + KG + ++ TY I++ L + G +A L M+++G P+ TY +
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 221/503 (43%), Gaps = 55/503 (10%)
Query: 101 EADSFTFTIVINCLCRLS---RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
+ D F + +I L R + R D +L M K + +I T+ ++ +++
Sbjct: 130 QNDPFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQM 189
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
L L + D + NS+T+ ++ + + S A + ++ G K D+ Y ++D
Sbjct: 190 CLRLVKKWD---LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLD 246
Query: 218 SLCKD--------------------------------GLVNEALGLWSEMTGKGIQPDVV 245
+L KD G +EA+GL++EM +G+ +VV
Sbjct: 247 ALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVV 306
Query: 246 TYNCLTRGLFHCSRGKVLKKGIM-----------PDVHTFSAIVDNYCKEGMIARAERLM 294
YN L + L ++GK++ K I P+ +T+S +++ EG + R + ++
Sbjct: 307 GYNTLMQVL---AKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Query: 295 GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
R + +++Y L+ + +A +++ M +Y +++ C
Sbjct: 364 EISKRYMTQ-GIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
K +A+ +L ++ KG+ D +N + K +L M+K G PD TY
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 415 AIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
I++ + EA++++ ELE+ + I Y+ +++ L G + +A F +Q
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
KGL DV TY+ +++ + ++ A L +M KGC PN TYN+ + L + G +
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 535 SEKYLQLMKGKGFSADATTTELL 557
+ MK +G + D+ T +L
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVL 623
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 103/214 (48%), Gaps = 2/214 (0%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
KT++A ++ +K+ + + + + + K+K + L ++M G D FT+
Sbjct: 422 KTIEA-IEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTY 480
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
I+I R+ D + + + +PDI++ +++N L G+V++A M E
Sbjct: 481 NILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQE 540
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G + T+ ++ K A F+++ +G + ++ Y ++D L K+G E
Sbjct: 541 KGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAE 600
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK 261
A+ L+S+M +G+ PD +TY L R L S GK
Sbjct: 601 AVDLYSKMKQQGLTPDSITYTVLER-LQSVSHGK 633
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
+ S++ LK + D F KM P P+I + +LI ++ AI++ + +
Sbjct: 448 VFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSD 507
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ D ++ +INCL + D M + GL PD+VT +T++ VE A
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAY 567
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
L M G + N T+ +++ L K G T+ A+ + K++ +G D YT +
Sbjct: 568 SLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/393 (26%), Positives = 180/393 (45%), Gaps = 27/393 (6%)
Query: 156 EQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
E+AL L + EMG+R + ++ ++I L K N A + V R + ++ +
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFS 275
+ K G V++A+ ++ ++T F C R + + +
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITS-----------------FDCVR----------TIQSLN 155
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK 335
+++ G + +A+ + + PN ++N LI + + A KV+D M+
Sbjct: 156 TLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEM 215
Query: 336 GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAA 395
PS VTYN+LI C+ M KA SLL +M+ K + P+ T+ L+ G C G A
Sbjct: 216 EVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEA 275
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
K+L+ M+ G P + Y I++ L K EA L E++K + + IY+I+++
Sbjct: 276 KKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNH 335
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
LC+ R+ +A + +Q KG K + TY +M+ G CR D +L M P
Sbjct: 336 LCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPT 395
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
T+ V GL++ G++ + L++M K S
Sbjct: 396 PATFVCMVAGLIKGGNLDHACFVLEVMGKKNLS 428
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/410 (22%), Positives = 181/410 (44%), Gaps = 18/410 (4%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ +++++ + A+ F++ + + ++ LI + K +++ +++ +
Sbjct: 52 FLTDLKEIEDPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN 111
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ F +I + D V + I +L T++N L G +E+A
Sbjct: 112 VRCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAK 171
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+M R NS + +I G + AA F ++ + V Y +++ L
Sbjct: 172 SFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----------KGIMP 269
C++ + +A L +M K I+P+ VT+ L +GL C +G+ + +G P
Sbjct: 232 CRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGL--CCKGEYNEAKKLMFDMEYRGCKP 289
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+ + ++ + K G I A+ L+G M + ++P+V YN L+N C + ++ +A +V
Sbjct: 290 GLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVL 349
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
M KGC P+ TY +I G+C+I+ D +++L M+ P T+ +V G K
Sbjct: 350 TEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKG 409
Query: 390 GMPLAAKELISTMQKH------GQLPDRITYAIILDGLFKCHFYPEAVSL 433
G A ++ M K G + ++ I DG C E +S+
Sbjct: 410 GNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALSEVISI 459
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/344 (21%), Positives = 146/344 (42%), Gaps = 45/344 (13%)
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG-----KVLK----KGIMPDVHTFSAI 277
EAL L+ + G + D +Y+ L L SR ++L+ + + F +
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAK-SRNFDAVDQILRLVRYRNVRCRESLFMGL 122
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
+ +Y K G + +A + + + + N+LIN +++ A +D
Sbjct: 123 IQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
P++V++N LI G+ + A + EM+ + P + T+N+L+G C+ AK
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
L+ M K P+ +T+ + ++ GLC
Sbjct: 243 LLEDMIKKRIRPNAVTFGL-----------------------------------LMKGLC 267
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC 517
G +A++ ++ +G K + Y I++ L + G +D+A+ LL +M+++ P+
Sbjct: 268 CKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVV 327
Query: 518 TYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
YN+ V L + + + L M+ KG +A T ++I+ F
Sbjct: 328 IYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 142/296 (47%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
+ G D HT++ +V N + +L+ M R G +PN TYN LI+++ + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
+AM V++ M GC P VTY TLI K +D AM + M GL+PD T++ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
KAG AA +L M G P+ +TY I++D K Y A+ LYR+++ +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
YSI+++ L G L++A F+ +Q K D Y ++V + G ++ A Q
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M G PN T N + LR I+ + + LQ M G T LL++
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 31/360 (8%)
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGR-GFKFDVPVYTAIMDSLCKDG 223
+ +G R ++Y ++ + GN A+G+F ++ + GFK D YT ++ +L +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCK 283
L EM G QP+ VTYN L +H++ NY
Sbjct: 379 QFGAINKLLDEMVRDGCQPNTVTYNRL--------------------IHSYGRA--NYLN 416
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
E M + M G +P+ TY +LI+ H + AM +Y M G P T T
Sbjct: 417 EAM-----NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
Y+ +I+ K + A L EMV++G TP++ T+N ++ KA A +L MQ
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
G PD++TY+I+++ L C + EA +++ E+++ N +Y +++D G ++
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
A +++ + GL+ +V T ++ R + +A +LL +M G P+ TY L +
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%)
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
G + + TY +++ Q K+ D M+ GC P+TVTYN LIH + + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
M++ +M G PD T+ L+ KAG A ++ MQ G PD TY++I++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
L K P A L+ E+ ++ Y+IM+D ++A + + +Q G + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
TY+I+++ L G L++AE + +M++K P++ Y L V + G++ ++ ++ Q
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 541 LMKGKGFSADATTTELLINFF 561
M G + T L++ F
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTF 619
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 136/285 (47%), Gaps = 8/285 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+T ++ + + K + L+ M G + ++ T+ +I+ R + + V M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ G +PD VT T+++ G ++ A+ + RM G +++T+ IIN L K G+
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
AA F ++ +G ++ Y +MD K AL L+ +M G +PD VTY+ +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 252 RGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
L HC ++ +K +PD + +VD + K G + +A + M G+
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
PNV T NSL++ +++ +A ++ +M+ G PS TY L+
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 169/408 (41%), Gaps = 18/408 (4%)
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD-E 167
IV N L R G + +GL D ++ + GN ALG + +
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQ 357
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G++ + +T+ ++ L + A ++ G + + Y ++ S + +NE
Sbjct: 358 PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAI 277
A+ ++++M G +PD VTY L H G ++ G+ PD T+S I
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLID--IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
++ K G + A +L M G PN+ TYN +++ H Q+A+K+Y M G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
P VTY+ ++ +++A ++ EM K PD + LV + KAG A +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
M G P+ T +L + + EA L + + + L + Y+++L C
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CC 654
Query: 458 SYGRLKDAREFFSGLQAK-GLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
+ GR K F L A G +F + G E + + A L
Sbjct: 655 TDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFL 702
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 16/280 (5%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ S ++ A++ FN+M P+ + LI++ K A+ + +RM + G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ D+FT++++INCL + + M G P++VT +++ N + AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M G+ + T+ ++ L G A F +++ + + D PVY ++D
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDV 271
K G V +A + M G++P+V T N L ++ +L G+ P +
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Query: 272 HTFSAIVDNYCKEGMIARAERLMGF----MARVGVEPNVF 307
T++ ++ + C +G R++ MGF MA G ++F
Sbjct: 645 QTYTLLL-SCCTDG---RSKLDMGFCGQLMASTGHPAHMF 680
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 142/296 (47%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
+ G D HT++ +V N + +L+ M R G +PN TYN LI+++ + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
+AM V++ M GC P VTY TLI K +D AM + M GL+PD T++ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
KAG AA +L M G P+ +TY I++D K Y A+ LYR+++ +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
YSI+++ L G L++A F+ +Q K D Y ++V + G ++ A Q
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M G PN T N + LR I+ + + LQ M G T LL++
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 31/360 (8%)
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGR-GFKFDVPVYTAIMDSLCKDG 223
+ +G R ++Y ++ + GN A+G+F ++ + GFK D YT ++ +L +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCK 283
L EM G QP+ VTYN L +H++ NY
Sbjct: 379 QFGAINKLLDEMVRDGCQPNTVTYNRL--------------------IHSYGRA--NYLN 416
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
E M + M G +P+ TY +LI+ H + AM +Y M G P T T
Sbjct: 417 EAM-----NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
Y+ +I+ K + A L EMV++G TP++ T+N ++ KA A +L MQ
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
G PD++TY+I+++ L C + EA +++ E+++ N +Y +++D G ++
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
A +++ + GL+ +V T ++ R + +A +LL +M G P+ TY L +
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%)
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
G + + TY +++ Q K+ D M+ GC P+TVTYN LIH + + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
M++ +M G PD T+ L+ KAG A ++ MQ G PD TY++I++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
L K P A L+ E+ ++ Y+IM+D ++A + + +Q G + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
TY+I+++ L G L++AE + +M++K P++ Y L V + G++ ++ ++ Q
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 541 LMKGKGFSADATTTELLINFF 561
M G + T L++ F
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTF 619
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 136/285 (47%), Gaps = 8/285 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+T ++ + + K + L+ M G + ++ T+ +I+ R + + V M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ G +PD VT T+++ G ++ A+ + RM G +++T+ IIN L K G+
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
AA F ++ +G ++ Y +MD K AL L+ +M G +PD VTY+ +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 252 RGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
L HC ++ +K +PD + +VD + K G + +A + M G+
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
PNV T NSL++ +++ +A ++ +M+ G PS TY L+
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 169/408 (41%), Gaps = 18/408 (4%)
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD-E 167
IV N L R G + +GL D ++ + GN ALG + +
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQ 357
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G++ + +T+ ++ L + A ++ G + + Y ++ S + +NE
Sbjct: 358 PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAI 277
A+ ++++M G +PD VTY L H G ++ G+ PD T+S I
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLID--IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
++ K G + A +L M G PN+ TYN +++ H Q+A+K+Y M G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
P VTY+ ++ +++A ++ EM K PD + LV + KAG A +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
M G P+ T +L + + EA L + + + L + Y+++L C
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CC 654
Query: 458 SYGRLKDAREFFSGLQAK-GLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
+ GR K F L A G +F + G E + + A L
Sbjct: 655 TDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFL 702
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 16/280 (5%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ S ++ A++ FN+M P+ + LI++ K A+ + +RM + G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ D+FT++++INCL + + M G P++VT +++ N + AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M G+ + T+ ++ L G A F +++ + + D PVY ++D
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDV 271
K G V +A + M G++P+V T N L ++ +L G+ P +
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Query: 272 HTFSAIVDNYCKEGMIARAERLMGF----MARVGVEPNVF 307
T++ ++ + C +G R++ MGF MA G ++F
Sbjct: 645 QTYTLLL-SCCTDG---RSKLDMGFCGQLMASTGHPAHMF 680
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 142/296 (47%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
+ G D HT++ +V N + +L+ M R G +PN TYN LI+++ + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
+AM V++ M GC P VTY TLI K +D AM + M GL+PD T++ ++
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
KAG AA +L M G P+ +TY I++D K Y A+ LYR+++ +
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
YSI+++ L G L++A F+ +Q K D Y ++V + G ++ A Q
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQW 596
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M G PN T N + LR I+ + + LQ M G T LL++
Sbjct: 597 YQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 168/360 (46%), Gaps = 31/360 (8%)
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGR-GFKFDVPVYTAIMDSLCKDG 223
+ +G R ++Y ++ + GN A+G+F ++ + GFK D YT ++ +L +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCK 283
L EM G QP+ VTYN L +H++ NY
Sbjct: 379 QFGAINKLLDEMVRDGCQPNTVTYNRL--------------------IHSYGRA--NYLN 416
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
E M + M G +P+ TY +LI+ H + AM +Y M G P T T
Sbjct: 417 EAM-----NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFT 471
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
Y+ +I+ K + A L EMV++G TP++ T+N ++ KA A +L MQ
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
G PD++TY+I+++ L C + EA +++ E+++ N +Y +++D G ++
Sbjct: 532 NAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVE 591
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
A +++ + GL+ +V T ++ R + +A +LL +M G P+ TY L +
Sbjct: 592 KAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%)
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
G + + TY +++ Q K+ D M+ GC P+TVTYN LIH + + +++A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
M++ +M G PD T+ L+ KAG A ++ MQ G PD TY++I++
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
L K P A L+ E+ ++ Y+IM+D ++A + + +Q G + D
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
TY+I+++ L G L++AE + +M++K P++ Y L V + G++ ++ ++ Q
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQ 598
Query: 541 LMKGKGFSADATTTELLINFF 561
M G + T L++ F
Sbjct: 599 AMLHAGLRPNVPTCNSLLSTF 619
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 136/285 (47%), Gaps = 8/285 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+T ++ + + K + L+ M G + ++ T+ +I+ R + + V M
Sbjct: 367 YTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQ 426
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ G +PD VT T+++ G ++ A+ + RM G +++T+ IIN L K G+
Sbjct: 427 EAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
AA F ++ +G ++ Y +MD K AL L+ +M G +PD VTY+ +
Sbjct: 487 AAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 252 RGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
L HC ++ +K +PD + +VD + K G + +A + M G+
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
PNV T NSL++ +++ +A ++ +M+ G PS TY L+
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 169/408 (41%), Gaps = 18/408 (4%)
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD-E 167
IV N L R G + +GL D ++ + GN ALG + +
Sbjct: 301 IVENVSSVLRRFRWGPAAEEALQNLGLRIDAYQANQVLKQMNDYGN---ALGFFYWLKRQ 357
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G++ + +T+ ++ L + A ++ G + + Y ++ S + +NE
Sbjct: 358 PGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAI 277
A+ ++++M G +PD VTY L H G ++ G+ PD T+S I
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLID--IHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
++ K G + A +L M G PN+ TYN +++ H Q+A+K+Y M G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
P VTY+ ++ +++A ++ EM K PD + LV + KAG A +
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
M G P+ T +L + + EA L + + + L + Y+++L C
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CC 654
Query: 458 SYGRLKDAREFFSGLQAK-GLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
+ GR K F L A G +F + G E + + A L
Sbjct: 655 TDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFL 702
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 127/280 (45%), Gaps = 16/280 (5%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ S ++ A++ FN+M P+ + LI++ K A+ + +RM + G
Sbjct: 405 LIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGG 464
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ D+FT++++INCL + + M G P++VT +++ N + AL
Sbjct: 465 LSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M G+ + T+ ++ L G A F +++ + + D PVY ++D
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDV 271
K G V +A + M G++P+V T N L ++ +L G+ P +
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Query: 272 HTFSAIVDNYCKEGMIARAERLMGF----MARVGVEPNVF 307
T++ ++ + C +G R++ MGF MA G ++F
Sbjct: 645 QTYTLLL-SCCTDG---RSKLDMGFCGQLMASTGHPAHMF 680
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 216/480 (45%), Gaps = 54/480 (11%)
Query: 41 LSSMRDLKTVDAAVDFFNKMAAINPF-PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
+S M+ + +D FNK + F N ++VL++ +V+ K + ++ +H +
Sbjct: 60 VSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAI---LHQMK 116
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKM-----GLEPDIVTLTTIVNGLCAEGN 154
E F ++ +N + SR+DL V+ MF + ++P + ++T +N L G
Sbjct: 117 YETCRFQESLFLNLMRHFSRSDLHDKVME-MFNLIQVIARVKPSLNAISTCLNLLIDSGE 175
Query: 155 VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
V N S + + K G + + ++
Sbjct: 176 V---------------------------------NLSRKLLLYAK-HNLGLQPNTCIFNI 201
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQ-PDVVTYNCLTRGLFHCSRGK---------VLK 264
++ CK+G +N A + EM GI P+ +TY+ L LF SR K + K
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK 261
Query: 265 KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQD 324
+GI PD TF+ +++ +C+ G + RA++++ FM + G PNV+ Y++L+N C ++Q+
Sbjct: 262 EGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQE 321
Query: 325 AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
A + +D + G TV Y TL++ +C+ + D+AM LLGEM D T+N ++
Sbjct: 322 AKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILR 381
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
G G A +++ G ++ +Y IIL+ L +AV + + +
Sbjct: 382 GLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWP 441
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
H ++ ++ LC G + G GL ++ +V+ +C+E L +LL
Sbjct: 442 HHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELL 501
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 150/338 (44%), Gaps = 29/338 (8%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIE-ADSFTFTIVINCLCRLSRTDLGFC 125
PN F +L+ K A +V+ M GI +S T++ +++CL SR+
Sbjct: 194 PNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVE 253
Query: 126 VLGLMF-KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
+ M K G+ PD VT ++NG C G VE+A + M + G N Y + A++NG
Sbjct: 254 LFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGF 313
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
CKVG A F +V+ G K D YT +M+ C++G +EA+ L EM + D
Sbjct: 314 CKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADT 373
Query: 245 VTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
+TYN + RGL EG A +++ GV
Sbjct: 374 LTYNVILRGL---------------------------SSEGRSEEALQMLDQWGSEGVHL 406
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
N +Y ++NA C +++ A+K M +G P T+N L+ C+ + + +L
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
+ GL P +W A+V CK + EL+ ++
Sbjct: 467 IGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 186/377 (49%), Gaps = 12/377 (3%)
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
+ G+ N+ T+ +++ L + A +++ +F ++ +M + L
Sbjct: 81 QQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH 140
Query: 226 NEALGLWSEMTGKG-IQPDV-VTYNCLT----RGLFHCSRGKVLKK----GIMPDVHTFS 275
++ + +++ + ++P + CL G + SR +L G+ P+ F+
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVE-PNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+V ++CK G I A ++ M R G+ PN TY++L++ + ++A+++++ MI
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260
Query: 335 K-GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
K G P VT+N +I+G+C+ ++++A +L M G P++ ++AL+ GFCK G
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320
Query: 394 AAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIML 453
AK+ ++K G D + Y +++ + EA+ L E++ Y+++L
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL 380
Query: 454 DGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCP 513
GL S GR ++A + ++G+ ++ +Y I++ LC G L+ A + L M E+G
Sbjct: 381 RGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIW 440
Query: 514 PNDCTYNLFVQGLLRRG 530
P+ T+N V L G
Sbjct: 441 PHHATWNELVVRLCESG 457
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 190/400 (47%), Gaps = 20/400 (5%)
Query: 176 THGAIINGLCKVGNTSAAIGYFKKV-EGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
+H + ++ + + + + F K + +GF + Y+ ++D+L + + +
Sbjct: 55 SHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQ 114
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK------------GIMPDVHTFSAIVDNYC 282
M + + + L R H SR + K + P ++ S ++
Sbjct: 115 MKYETCRFQESLFLNLMR---HFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLI 171
Query: 283 KEGMIARAERLMGFMAR-VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG-CLPS 340
G + + +L+ + +G++PN +N L+ HC + A V + M G P+
Sbjct: 172 DSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPN 231
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKELI 399
++TY+TL+ + +A+ L +M++K G++PD T+N ++ GFC+AG AK+++
Sbjct: 232 SITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKIL 291
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
M+K+G P+ Y+ +++G K EA + E++K L Y+ +++ C
Sbjct: 292 DFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRN 351
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
G +A + ++A + D TY ++++GL EG ++A Q+L +G N +Y
Sbjct: 352 GETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSY 411
Query: 520 NLFVQGLLRRGDISRSEKYLQLMKGKG-FSADATTTELLI 558
+ + L G++ ++ K+L +M +G + AT EL++
Sbjct: 412 RIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVV 451
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/505 (22%), Positives = 222/505 (43%), Gaps = 15/505 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
V+ + ++Y A+S +++M +LG F++ VI CL + + + ++ ++
Sbjct: 480 LAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQ 539
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
++ PD+ T +VN LC + + + A + M+E+G R + +II L K G
Sbjct: 540 ELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVV 599
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A F K+ G + D Y ++++ ++G ++EA L E+ ++P TY L
Sbjct: 600 EAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLI 659
Query: 252 RGLFHC---SRG-----KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
G +G K+L+ G+ P+V ++A++ ++ K+G + L G M ++
Sbjct: 660 SGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIK 719
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK---A 360
+ Y +L++ + +V + L + L+ + A
Sbjct: 720 HDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFA 779
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
M ++G+ V K + P++ N ++ G+C AG A + +MQK G +P+ +TY I++
Sbjct: 780 MEVIGK-VKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKS 838
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
+ A+ L+ E N + +YS +L GLC + R DA +Q G+ +
Sbjct: 839 HIEAGDIESAIDLF---EGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPN 895
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
+Y ++Q LC L +A +++ DM P + + L + +
Sbjct: 896 KDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFA 955
Query: 541 LMKGKGFSADATTTELLINFFSGNK 565
+M G S T L+ + N+
Sbjct: 956 IMVQSGRSLLNCTKPGLLKMLNQNQ 980
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 132/599 (22%), Positives = 248/599 (41%), Gaps = 79/599 (13%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPF-PNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
L+ + ++ A F+N+ N P+ ++ +VK++ + A + + R+ +
Sbjct: 101 LIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIAS 160
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
G + ++V++ LC R F + + G + + GLC G++ +A
Sbjct: 161 GYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEA 220
Query: 159 LGLA---MRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
+G+ M M N Y ++ CK G + A F +E G+ D +YT +
Sbjct: 221 IGMLDTLCGMTRMPLPVNLYK--SLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCL 278
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC---SRGKVL-----KKGI 267
M CKD + A+ L+ M + + D +N L G +G+V+ KKG+
Sbjct: 279 MKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGV 338
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLM---------------------GF---------- 296
+V T+ ++ +YCKEG + A RL GF
Sbjct: 339 QSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAV 398
Query: 297 -----MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC---LP--------- 339
M G+ P+ TY L+ +++ AM + S++ GC P
Sbjct: 399 DLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIE 458
Query: 340 -----------------STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
+ V + C + A+S + +MVN G TP ++N++
Sbjct: 459 VKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSV 518
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
+ + + L++ +Q+ +PD TY I+++ L K + A ++ +E++ L
Sbjct: 519 IKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGL 578
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
+ IYS ++ L GR+ +A E F+ + G++ D Y IM+ R G +D+A +
Sbjct: 579 RPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANE 638
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
L+ ++ + P+ TY + + G ++ G + + +YL M G S + LI F
Sbjct: 639 LVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHF 697
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 122/524 (23%), Positives = 220/524 (41%), Gaps = 26/524 (4%)
Query: 49 TVDAAVDFF-NKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
VD A+ F N + + N+ +T LI K A+ L+ RM GI D T+
Sbjct: 357 NVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITY 416
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
+++ L + +L + G + + + N E VE LG R D
Sbjct: 417 FVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGN---IEVKVESLLGEIARKDA 473
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
+ + LC N AA+ +K+ G Y +++ L ++ ++ +
Sbjct: 474 ---NLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIED 530
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAI 277
L + + PDV TY + L C + + + G+ P V +S+I
Sbjct: 531 LASLVNIIQELDFVPDVDTYLIVVNEL--CKKNDRDAAFAIIDAMEELGLRPTVAIYSSI 588
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
+ + K+G + AE M G++P+ Y +IN + ++ +A ++ + ++
Sbjct: 589 IGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFL 648
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
PS+ TY LI G+ K+ M+K L +M+ GL+P++ + AL+G F K G +
Sbjct: 649 RPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFT 708
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIML---D 454
L M ++ D I Y +L GL++ + + E K L + + ++
Sbjct: 709 LFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPS 768
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
L +YG A E G K + +++ + ++ G C G LD+A L M+++G P
Sbjct: 769 SLGNYGSKSFAMEVI-GKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVP 827
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
N TY + ++ + GDI E + L +G D L+
Sbjct: 828 NLVTYTILMKSHIEAGDI---ESAIDLFEGTNCEPDQVMYSTLL 868
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 197/499 (39%), Gaps = 50/499 (10%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A F+ M + + +T L+ K + T A+ L RM E D F +I+
Sbjct: 256 AEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIH 315
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
+L D G + M K G++ ++ T ++ C EGNV+ AL L
Sbjct: 316 GFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF---------- 365
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
V NT + +V YT ++ K G +++A+ L
Sbjct: 366 --------------VNNTGS----------EDISRNVHCYTNLIFGFYKKGGMDKAVDLL 401
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCK--------- 283
M GI PD +TY L + L C LK ++ +I+DN C
Sbjct: 402 MRMLDNGIVPDHITYFVLLKMLPKCHE---LKYAMV----ILQSILDNGCGINPPVIDDL 454
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
+ + E L+G +AR + A C Q A+ + M+ GC P +
Sbjct: 455 GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFS 514
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
YN++I + ++ SL+ + PD+ T+ +V CK AA +I M+
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAME 574
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
+ G P Y+ I+ L K EA + ++ + + Y IM++ GR+
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
+A E + L+ FTYT+++ G + G+++ Q L M E G PN Y +
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 524 QGLLRRGDISRSEKYLQLM 542
L++GD S LM
Sbjct: 695 GHFLKKGDFKFSFTLFGLM 713
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/475 (23%), Positives = 206/475 (43%), Gaps = 58/475 (12%)
Query: 52 AAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVI 111
AA+ KM + P + +I + + SLV + L D T+ IV+
Sbjct: 495 AALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVV 554
Query: 112 NCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA-------LGLAMR 164
N LC+ + D F ++ M ++GL P + ++I+ L +G V +A L ++
Sbjct: 555 NELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQ 614
Query: 165 MDEMGY----------------------------RCNSYTHGAIINGLCKVGNTSAAIGY 196
DE+ Y R +S+T+ +I+G K+G Y
Sbjct: 615 PDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQY 674
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH 256
K+ G +V +YTA++ K G + L+ M I+ D + Y L GL+
Sbjct: 675 LDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWR 734
Query: 257 C-------------SRGKVLKKGIM--PDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
+ K+L++ I P V S++ NY G + A ++G + +
Sbjct: 735 AMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSL-GNY---GSKSFAMEVIGKVKK-S 789
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
+ PN++ +N++I +C ++ +A +SM +G +P+ VTY L+ + ++ A+
Sbjct: 790 IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAI 849
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL 421
L E N PD ++ L+ G C PL A L+ MQK G P++ +Y +L L
Sbjct: 850 DLF-EGTN--CEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
EAV + +++ +++ ++ ++ LC +L++AR F+ + G
Sbjct: 907 CYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/499 (22%), Positives = 196/499 (39%), Gaps = 71/499 (14%)
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGL-MFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
GIE DS + +I L + + + + G+ PD L ++V L ++
Sbjct: 90 GIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDE 149
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
A R+ GY + + +++ LC A F++V+ RG + +
Sbjct: 150 ARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFK 209
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAI 277
LC G +NEA+G+ + G P V L + LF+C
Sbjct: 210 GLCGHGHLNEAIGMLDTLCGMTRMPLPVN---LYKSLFYC-------------------- 246
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
+CK G A AE L M G + Y L+ +C + M AM++Y M+ +
Sbjct: 247 ---FCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSF 303
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG-----MP 392
+NTLIHG+ K+ +DK + +M+ KG+ ++ T++ ++G +CK G +
Sbjct: 304 ELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALR 363
Query: 393 L-------------------------------AAKELISTMQKHGQLPDRITYAIILDGL 421
L A +L+ M +G +PD ITY ++L L
Sbjct: 364 LFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKML 423
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG-LQAKGLKID 480
KCH A+ + + + LD I ++D L G ++ E G + K +
Sbjct: 424 PKCHELKYAMVILQSI----LDNGCGINPPVIDDL---GNIEVKVESLLGEIARKDANLA 476
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
++ LC + A + M GC P +YN ++ L + I +
Sbjct: 477 AVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVN 536
Query: 541 LMKGKGFSADATTTELLIN 559
+++ F D T +++N
Sbjct: 537 IIQELDFVPDVDTYLIVVN 555
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 157/391 (40%), Gaps = 39/391 (9%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
DAA + M + P + ++ +I + K A +M GI+ D + I+
Sbjct: 564 DAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIM 623
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
IN R R D ++ + K L P T T +++G G +E+ +M E G
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
N + A+I K G+ + F + K D Y ++ G
Sbjct: 684 SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLS------------G 731
Query: 231 LWSEMTGKGIQPDVVTY-----------------------NCLTRGLFHCSRGKVLKKGI 267
LW M K + +V N ++ GKV KK I
Sbjct: 732 LWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKV-KKSI 790
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
+P+++ + I+ YC G + A + M + G+ PN+ TY L+ +H ++ A+
Sbjct: 791 IPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAID 850
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+++ C P V Y+TL+ G C K+ A++L+ EM G+ P+ ++ L+ C
Sbjct: 851 LFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLC 907
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
+ + + A +++ M P I + ++
Sbjct: 908 YSRLTMEAVKVVKDMAALDIWPRSINHTWLI 938
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 142/347 (40%), Gaps = 34/347 (9%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+S + ++ + +KM PN+ +T LI +K + + +L M
Sbjct: 658 LISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEND 717
Query: 100 IEADSFTFTIVINCLCR-LSRTDLGFCVLGLMFKMGLEPDIVT--LTTIVNGLCAEGNVE 156
I+ D + +++ L R ++R ++ + L+ I T L +I + L G+
Sbjct: 718 IKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKS 777
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
A+ + ++ + N Y H II G C G A + + ++ G ++ YT +M
Sbjct: 778 FAMEVIGKVKK-SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILM 836
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSA 276
S + G + A+ L+ G +PD V Y+ L +GL C + L
Sbjct: 837 KSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGL--CDFKRPLD------------ 879
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
A LM M + G+ PN +Y L+ C +A+KV M
Sbjct: 880 -------------ALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALD 926
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
P ++ + LI+ C+ KK+ +A +L MV G + CT L+
Sbjct: 927 IWPRSINHTWLIYILCEEKKLREARALFAIMVQSGRSLLNCTKPGLL 973
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 112/277 (40%), Gaps = 2/277 (0%)
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS-MIYKGCLPSTVTYN 345
I+ A + F G+E + Y +LI Q A Y+ +I G +P + +
Sbjct: 76 ISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLD 135
Query: 346 TLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH 405
+++ K+++ D+A + L ++ G P + + +V C L A +++
Sbjct: 136 SMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKER 195
Query: 406 GQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN-LDRHITIYSIMLDGLCSYGRLKD 464
G + GL EA+ + L M + + +Y + C G +
Sbjct: 196 GSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAE 255
Query: 465 AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
A F ++ G +D YT +++ C++ + A +L + M E+ + C +N +
Sbjct: 256 AEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIH 315
Query: 525 GLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
G ++ G + + M KG ++ T ++I +
Sbjct: 316 GFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSY 352
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 154/328 (46%), Gaps = 9/328 (2%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLA 162
D+ +F + I+ RL + ++ M + + P T + + G ++A+ L
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 163 MRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKD 222
+ M E G + + I++ LCK A F+ + GR F D Y I++ C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 223 GLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDVHTF 274
+AL + EM +GI P++ TYN + +G F + + + K+ DV T+
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+ +V + G I RA + M R GV P+V TYN++I C +D +++A+ +++ M+
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
+G P+ TYN LI G + + L+ M N+G P+ T+N ++ + +
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLF 422
A L M LP+ TY I++ G+F
Sbjct: 389 ALGLFEKMGSGDCLPNLDTYNILISGMF 416
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 162/352 (46%), Gaps = 18/352 (5%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
F + I++ ++ + T SL+ RM SL I TF IV + D + M
Sbjct: 94 FDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMH 153
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ G D+ + TI++ LC VE+A L R + ++ T+ I+NG C + T
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYEL-FRALRGRFSVDTVTYNVILNGWCLIKRTP 212
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A+ K++ RG ++ Y ++ + G + A + EM + + DVVTY +
Sbjct: 213 KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVV 272
Query: 252 RGLFHCSRGK--------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
G K ++++G++P V T++A++ CK+ + A + M R G E
Sbjct: 273 HGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYE 332
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
PNV TYN LI + ++ M +GC P+ TYN +I + + +++KA+ L
Sbjct: 333 PNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGL 392
Query: 364 LGEMVNKGLTPDICTWNALVGG-FCK--------AGMPLAAKELISTMQKHG 406
+M + P++ T+N L+ G F + AG AKE++ K G
Sbjct: 393 FEKMGSGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSG 444
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 146/280 (52%), Gaps = 4/280 (1%)
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
I P TF+ + + Y G +A +L M G ++ ++N++++ C +++ A
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
+++ ++ + + TVTYN +++GWC IK+ KA+ +L EMV +G+ P++ T+N ++ GF
Sbjct: 182 ELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
+AG A E M+K D +TY ++ G A +++ E+ + + +
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
Y+ M+ LC +++A F + +G + +V TY ++++GL G E+L+
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
ME +GC PN TYN+ ++ + S EK L L + G
Sbjct: 361 MENEGCEPNFQTYNMMIRYY---SECSEVEKALGLFEKMG 397
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 138/315 (43%), Gaps = 29/315 (9%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
D AV F M F ++ F +++++ K K A L + + D+ T+ ++
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRG-RFSVDTVTYNVI 201
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
+N C + RT VL M + G+ P++ T T++ G G + A + M +
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC 261
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
+ T+ +++G G A F ++ G V Y A++ LCK V A+
Sbjct: 262 EIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVV 321
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
++ EM +G +P+V TYN L RGLFH G +R
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHA---------------------------GEFSRG 354
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
E LM M G EPN TYN +I + +++ A+ +++ M CLP+ TYN LI G
Sbjct: 355 EELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISG 414
Query: 351 WCKIKKMDKAMSLLG 365
++K + M + G
Sbjct: 415 MF-VRKRSEDMVVAG 428
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 144/293 (49%), Gaps = 1/293 (0%)
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
D +F +D + + L+ M + + P+ T+ + + + A+K++
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
+M GC ++NT++ CK K+++KA L + + + D T+N ++ G+C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLI 208
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
A E++ M + G P+ TY +L G F+ A + E++K + + + Y
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
+ ++ G G +K AR F + +G+ V TY M+Q LC++ +++A + +M
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVR 328
Query: 510 KGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+G PN TYN+ ++GL G+ SR E+ +Q M+ +G + T ++I ++S
Sbjct: 329 RGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYS 381
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 128/274 (46%), Gaps = 6/274 (2%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARA-ERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
+ G D+ +F+ I+D CK + +A E R V+ TYN ++N CL +
Sbjct: 154 EHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVD--TVTYNVILNGWCLIKRT 211
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
A++V M+ +G P+ TYNT++ G+ + ++ A EM + D+ T+ +
Sbjct: 212 PKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTV 271
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
V GF AG A+ + M + G LP TY ++ L K AV ++ E+ +
Sbjct: 272 VHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGY 331
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
+ ++T Y++++ GL G E ++ +G + + TY +M++ ++ A
Sbjct: 332 EPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALG 391
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
L M C PN TYN+ + G+ R RSE
Sbjct: 392 LFEKMGSGDCLPNLDTYNILISGMFVR---KRSE 422
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 87/215 (40%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
+K A++ +M PN+ + ++ + A M E D T
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+T V++ V M + G+ P + T ++ LC + NVE A+ + M
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
GY N T+ +I GL G S +++E G + + Y ++ + V
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK 261
+ALGL+ +M P++ TYN L G+F R +
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILISGMFVRKRSE 422
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 202/444 (45%), Gaps = 17/444 (3%)
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
V GLM G+ ++ ++ VN LC N+E+A L + +G + T+ +I G
Sbjct: 2 VRGLMKFPGISTKLLNIS--VNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYT 59
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
+ A +++ G + DV Y +++ K+ ++N L L+ EM G+ PD+
Sbjct: 60 RFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMW 119
Query: 246 TYNCLTRGLFHCSR-GKVLK--------KGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
+YN L F R G+ K G++P + T++ ++D CK G A L
Sbjct: 120 SYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH 179
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
+ + V+P + TYN LIN C ++ + + G P+ VTY T++ + K K+
Sbjct: 180 L-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKR 238
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG-QLPDRITYA 415
++K + L +M +G T D A+V K G A E + + + G + D ++Y
Sbjct: 239 IEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYN 298
Query: 416 IILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK 475
+L+ FK L E+E L ++I+++GL + G A + + +
Sbjct: 299 TLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEM 358
Query: 476 GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRS 535
G++ V T ++ GLC+ G +D A +L ME + ++ TY V L + G + +
Sbjct: 359 GMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCA 414
Query: 536 EKYLQLMKGKGFSADATTTELLIN 559
K L KG ++ +++
Sbjct: 415 SKLLLSCYNKGMKIPSSARRAVLS 438
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 190/416 (45%), Gaps = 17/416 (4%)
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
I +N LC+ + +L ++G+ PD++T T++ G +++A + RM
Sbjct: 16 LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
E G + T+ ++I+G K + + F ++ G D+ Y +M K G
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 227 EALGLWSE-MTGKGIQPDVVTYNCLTRGLFHCSRG---------KVLKKGIMPDVHTFSA 276
EA + E + G+ P + TYN L L C G K LK + P++ T++
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDAL--CKSGHTDNAIELFKHLKSRVKPELMTYNI 193
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
+++ CK + + +M + + G PN TY +++ + +++ ++++ M +G
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL-TPDICTWNALVGGFCKAGMPLAA 395
++ K + ++A + E+V G + DI ++N L+ + K G A
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAV 313
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
+L+ ++ G PD T+ II++GL A + +M + + + ++DG
Sbjct: 314 DDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDG 373
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
LC G + A F+ ++ + D FTYT +V LC++G L A +LL+ KG
Sbjct: 374 LCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 146/303 (48%), Gaps = 7/303 (2%)
Query: 265 KGIM--PDVHT--FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
+G+M P + T + V++ CK + RAE L+ R+GV P+V TYN+LI +
Sbjct: 3 RGLMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFI 62
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+ +A V M G P TYN+LI G K +++ + L EM++ GL+PD+ ++N
Sbjct: 63 GIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYN 122
Query: 381 ALVGGFCKAGMPLAA-KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
L+ + K G A K L + G +P TY I+LD L K A+ L++ L K
Sbjct: 123 TLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-K 181
Query: 440 MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDD 499
+ + Y+I+++GLC R+ L+ G + TYT M++ + ++
Sbjct: 182 SRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEK 241
Query: 500 AEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRS-EKYLQLMKGKGFSADATTTELLI 558
QL + M+++G + V L++ G + E +L++ S D + L+
Sbjct: 242 GLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLL 301
Query: 559 NFF 561
N +
Sbjct: 302 NLY 304
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 15/285 (5%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P I + +L++ + K H AI L K + S ++ + T+ I+IN LC+ R +
Sbjct: 152 PGIDTYNILLDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWM 210
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
+ + K G P+ VT TT++ +E+ L L ++M + GY + + + A+++ L K
Sbjct: 211 MRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIK 270
Query: 187 VGNTSAAIGYFKKVEGRGFKF-DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
G A ++ G + D+ Y +++ KDG ++ L E+ KG++PD
Sbjct: 271 TGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDY 330
Query: 246 TYNCLTRGLFHCSRGKVLKK--------GIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
T+ + GL + +K G+ P V T + ++D CK G + RA RL M
Sbjct: 331 THTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC-LPST 341
+ FTY S+++ C ++ A K+ S KG +PS+
Sbjct: 391 E----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSS 431
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 113/436 (25%), Positives = 190/436 (43%), Gaps = 49/436 (11%)
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
++ G K+G F++V GF V +++ L K L+ + ++S M G
Sbjct: 172 LVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVG 231
Query: 240 IQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
I P+ T+N LT + S K+ ++G PD+ T++ +V +YC+ G + A
Sbjct: 232 IHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAF 291
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
L M R V P++ TY SLI C ++++A + + M+ +G P ++YNTLI+ +
Sbjct: 292 YLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAY 351
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF------------------------- 386
CK M ++ LL EM+ + PD T +V GF
Sbjct: 352 CKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPF 411
Query: 387 ----------CKAGMPLAAKELIS-TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
C+ G P AAK L+ +++ G TY +++ L +C EA+ L
Sbjct: 412 EVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKG 471
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
+L+ N Y ++ LC GR ++A + + +K D F +V G C+E
Sbjct: 472 KLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKEL 531
Query: 496 LLDDAEQL--LMDMEEKGCPPNDCTYNLFVQGLLRRG-DISRSEKYLQLMKGKGFSADAT 552
D AE+L L ME + P +YN V+ + G ++ + + M+ GF +
Sbjct: 532 DFDKAERLLSLFAMEFRIFDPE--SYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRL 589
Query: 553 TTELLINFFSGNKADN 568
T + LI N
Sbjct: 590 TCKYLIQVLEQPSLPN 605
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 177/394 (44%), Gaps = 46/394 (11%)
Query: 207 FDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN------CLTRGLFHCSR- 259
+D V+ ++ K GLV E ++ E+ G VVT N + C +
Sbjct: 164 WDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQV 223
Query: 260 -GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCL 318
+ + GI P+ +TF+ + + +C + + + M G EP++ TYN+L++++C
Sbjct: 224 YSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCR 283
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
+ ++++A +Y M + +P VTY +LI G CK ++ +A MV++G+ PD +
Sbjct: 284 RGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMS 343
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
+N L+ +CK GM +K+L+ M + +PDR T +I++G + AV+ EL
Sbjct: 344 YNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELR 403
Query: 439 KMNLDRHITIYSIMLDGLCSYGR------------------------------------L 462
++ +D + ++ LC G+ +
Sbjct: 404 RLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAI 463
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLF 522
++A L+ + +D TY ++ LCR G +AE L+ +M + P+
Sbjct: 464 EEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGAL 523
Query: 523 VQGLLRRGDISRSEKYLQL--MKGKGFSADATTT 554
V G + D ++E+ L L M+ + F ++ +
Sbjct: 524 VYGYCKELDFDKAERLLSLFAMEFRIFDPESYNS 557
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 139/296 (46%), Gaps = 13/296 (4%)
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
V +M ++G+ P+ T + N C + N + +M+E G+ + T+ +++ C
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
+ G A +K + R D+ YT+++ LCKDG V EA + M +GI+PD +
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 246 TYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
+YN L +C G ++L ++PD T IV+ + +EG + A +
Sbjct: 343 SYNTLIYA--YCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI-YKGCLPSTVTYNTLIHGWCKI 354
+ R+ V+ + LI + C + + A + D +I +G TYN LI +
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
+++A+ L G++ N+ D T+ AL+G C+ G A+ L++ M PD
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 109/225 (48%)
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
C V ++ L+ G+ K+ +++ + E+++ G + + T N L+ G K +
Sbjct: 162 CNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCW 221
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
++ S M + G P+ T+ I+ + + E ++E+ + + Y+ ++
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
C GRLK+A + + + + D+ TYT +++GLC++G + +A Q M ++G P+
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+YN + + G + +S+K L M G D T ++++ F
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGF 386
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 140/296 (47%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
+ G D HT++ +V N + +L+ M R G +PN TYN LI+++ + ++
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
+AM V++ M GC P VTY TLI K +D AM + M GL+PD T++ ++
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
KAG AA L M G P+ +T+ I++ K Y A+ LYR+++
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
YSI+++ L G L++A F+ +Q K D Y ++V + G +D A Q
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQW 591
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M + G PN T N + LR +S + LQ M G T LL++
Sbjct: 592 YQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 166/360 (46%), Gaps = 31/360 (8%)
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGR-GFKFDVPVYTAIMDSLCKDG 223
+ G+R ++Y + L ++ N + A+G+F ++ + GFK D YT ++ +L +
Sbjct: 317 LHNFGFRMDAYQANQV---LKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 373
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCK 283
E L EM G +P+ VTYN L +H++ NY K
Sbjct: 374 QFGEINKLLDEMVRDGCKPNTVTYNRL--------------------IHSYGRA--NYLK 411
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
E M + M G EP+ TY +LI+ H + AM +Y M G P T T
Sbjct: 412 EAM-----NVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFT 466
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
Y+ +I+ K + A L EMV +G TP++ T+N ++ KA A +L MQ
Sbjct: 467 YSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ 526
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
G PD++TY+I+++ L C F EA ++ E+++ N +Y +++D G +
Sbjct: 527 NAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVD 586
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
A +++ + GL+ +V T ++ R + +A LL M G P+ TY L +
Sbjct: 587 KAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 7/298 (2%)
Query: 271 VHTFSAIVDNYCKEGMIARAERL---MGFMARVGVEPNV----FTYNSLINAHCLQDQMQ 323
+H F +D Y ++ + + +GF + +P TY +++ Q
Sbjct: 317 LHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFG 376
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
+ K+ D M+ GC P+TVTYN LIH + + + +AM++ +M G PD T+ L+
Sbjct: 377 EINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLI 436
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
KAG A ++ MQ+ G PD TY++I++ L K P A L+ E+
Sbjct: 437 DIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCT 496
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
++ ++IM+ + A + + +Q G + D TY+I+++ L G L++AE +
Sbjct: 497 PNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGV 556
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+M+ K P++ Y L V + G++ ++ ++ Q M G + T L++ F
Sbjct: 557 FAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTF 614
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 144/305 (47%), Gaps = 9/305 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+T ++ + + K + L+ M G + ++ T+ +I+ R + V M
Sbjct: 362 YTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQ 421
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ G EPD VT T+++ G ++ A+ + RM E G +++T+ IIN L K G+
Sbjct: 422 EAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLP 481
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
AA F ++ G+G ++ + ++ K AL L+ +M G QPD VTY+ +
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 252 RGLFHCS--------RGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
L HC ++ +K +PD + +VD + K G + +A + M + G+
Sbjct: 542 EVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLR 601
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
PNV T NSL++ +M +A + SM+ G PS TY TL+ C + + M
Sbjct: 602 PNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTY-TLLLSCCTDARSNFDMGF 660
Query: 364 LGEMV 368
G+++
Sbjct: 661 CGQLM 665
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 12/252 (4%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A++ FN+M P+ + LI++ K A+ + +RM G+ D+FT++++IN
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
CL + + M G P++VT ++ N E AL L M G++
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ T+ ++ L G A G F +++ + + D PVY ++D K G V++A +
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKE 284
M G++P+V T N L R +L G+ P + T++ ++ + C +
Sbjct: 593 QAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL-SCCTD 651
Query: 285 GMIARAERLMGF 296
AR+ MGF
Sbjct: 652 ---ARSNFDMGF 660
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 89/201 (44%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A+D + +M P+ ++V+IN + K H A L M G + TF I
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNI 504
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I + + + M G +PD VT + ++ L G +E+A G+ M
Sbjct: 505 MIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ + +G +++ K GN A +++ + G + +VP +++ + + ++EA
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAY 624
Query: 230 GLWSEMTGKGIQPDVVTYNCL 250
L M G+ P + TY L
Sbjct: 625 NLLQSMLALGLHPSLQTYTLL 645
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 147/385 (38%), Gaps = 47/385 (12%)
Query: 52 AAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVI 111
AA F +M PN+ F ++I L K ++Y TA+ L + M + G + D T++IV+
Sbjct: 482 AAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 112 NCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYR 171
L + V M + PD +V+ GNV++A M + G R
Sbjct: 542 EVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLR 601
Query: 172 CNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGL 231
N T ++++ +V S A + + G + YT ++ S C D N +G
Sbjct: 602 PNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL-SCCTDARSNFDMGF 660
Query: 232 WSEMTGKGIQP-------------------DVVTYNCLTRGLFHCSRGKVLKKGIMPDVH 272
++ P D V+ N L F S + K+G+M
Sbjct: 661 CGQLMAVSGHPAHMFLLKMPPAGPDGQKVRDHVS-NFLD---FMHSEDRESKRGLM---- 712
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS----LINAHCLQD-----QMQ 323
A+VD K G+ A + A V P+ S LIN H + + +
Sbjct: 713 --DAVVDFLHKSGLKEEAGSVWEVAAGKNVYPDALREKSYSYWLINLHVMSEGTAVIALS 770
Query: 324 DAMKVY-DSMIYKGCLPSTVTYNTLIHGW---CKIKKMDKAMSLLGEMVNKGLTPDICTW 379
+ + M+ G PS + ++ GW ++ + E++N P T
Sbjct: 771 RTLAWFRKQMLVSGDCPSRI---DIVTGWGRRSRVTGTSMVRQAVEELLNIFNFP-FFTE 826
Query: 380 NALVGGFCKAGMPLAAKELISTMQK 404
N G F +G PL L S +++
Sbjct: 827 NGNSGCFVGSGEPLKNWLLESYVER 851
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 154/317 (48%), Gaps = 10/317 (3%)
Query: 206 KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK 265
K D Y ++ + G ++AL L+ EM K ++P VT+ L GL SR K K
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 266 ---------GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH 316
G+ P VH +++++ C+ G ++ A +L ++ + Y++LI++
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 317 CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
+ + + + M KGC P TVTYN LI+G+C + A +L EMV KGL PD+
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
++N ++G F + A L M + G PD ++Y I+ DGL + + EA + E
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
+ L LC G+L+ + S L +G+ D +++M+ +C+E +
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPV 447
Query: 497 LDDAEQLLMDMEEKGCP 513
+ D+ LL++ ++ P
Sbjct: 448 ISDSIDLLLNTVKEDGP 464
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 144/307 (46%), Gaps = 10/307 (3%)
Query: 136 EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG 195
+PD T +++G G + AL L M + + T G +I+GLCK A+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 196 Y-FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
++ G + V +Y +++ +LC+ G ++ A L E I+ D Y+ L L
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSL 268
Query: 255 FHCSRG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
R ++ +KG PD T++ +++ +C E A R++ M G++P+V
Sbjct: 269 IKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDV 328
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
+YN ++ + ++A +++ M +GC P T++Y + G C+ + ++A +L E
Sbjct: 329 ISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M+ KG P + C++G ++IS++ + G D +++++ + K
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHR-GIAGDADVWSVMIPTMCKEPV 447
Query: 427 YPEAVSL 433
+++ L
Sbjct: 448 ISDSIDL 454
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 139/331 (41%), Gaps = 53/331 (16%)
Query: 241 QPDVVTYNCLTRGLFHCSRG-----------KVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
+PD TYN L G CS+ +++KK + P TF ++ CK+ +
Sbjct: 149 KPDACTYNILIHG---CSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKE 205
Query: 290 AERLMGFMARV-GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP-STVTYNTL 347
A ++ M +V GV P V Y SLI A C ++ A K+ D Y+G + Y+TL
Sbjct: 206 ALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA-YEGKIKVDAAIYSTL 264
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
I K + ++ +L EM KG PD T+N L+ GFC +A ++ M + G
Sbjct: 265 ISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGL 324
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
PD I+Y +IL F+ + EA L+ ++ +
Sbjct: 325 KPDVISYNMILGVFFRIKKWEEATYLFEDMPR---------------------------- 356
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLL 527
+G D +Y I+ GLC ++A +L +M KG P F+Q L
Sbjct: 357 -------RGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLC 409
Query: 528 RRGDISRSEKYLQLMKGKGFSADATTTELLI 558
G + K + + +G + DA ++I
Sbjct: 410 ESGKLEILSKVISSLH-RGIAGDADVWSVMI 439
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 96/222 (43%), Gaps = 1/222 (0%)
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P TYN LIHG + D A+ L EMV K + P T+ L+ G CK A ++
Sbjct: 150 PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKM 209
Query: 399 ISTMQK-HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
M K +G P YA ++ L + A L E + + IYS ++ L
Sbjct: 210 KHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLI 269
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC 517
GR + + KG K D TY +++ G C E + A ++L +M EKG P+
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 518 TYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+YN+ + R + + M +G S D + ++ +
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFD 371
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 99/210 (47%), Gaps = 5/210 (2%)
Query: 353 KIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRI 412
+++KM + +S + E PD CT+N L+ G ++G A +L M K P +
Sbjct: 133 ELEKMKERLSSIDEFGK----PDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGV 188
Query: 413 TYAIILDGLFKCHFYPEAVSLYRELEKM-NLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
T+ ++ GL K EA+ + ++ K+ + + IY+ ++ LC G L A +
Sbjct: 189 TFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDE 248
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
+K+D Y+ ++ L + G ++ +L +M EKGC P+ TYN+ + G D
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND 308
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ + L M KG D + +++ F
Sbjct: 309 SESANRVLDEMVEKGLKPDVISYNMILGVF 338
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 11/231 (4%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P + + LI + ++ + A L + I+ D+ ++ +I+ L + R++ +
Sbjct: 221 PTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMI 280
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L M + G +PD VT ++NG C E + E A + M E G + + ++ I+ +
Sbjct: 281 LEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFR 340
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+ A F+ + RG D Y + D LC+ EA + EM KG +P
Sbjct: 341 IKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDR 400
Query: 247 YNCLTRGLFHCSRGKV---------LKKGIMPDVHTFSAIVDNYCKEGMIA 288
+ L C GK+ L +GI D +S ++ CKE +I+
Sbjct: 401 LEGFLQKL--CESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVIS 449
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 118/285 (41%), Gaps = 10/285 (3%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL-GIEADSFTFTI 109
D A+ F++M P F LI+ + K A+ + M + G+ +
Sbjct: 169 DDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYAS 228
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I LC++ F + ++ ++ D +T+++ L G + + M E G
Sbjct: 229 LIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKG 288
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ ++ T+ +ING C ++ +A ++ +G K DV Y I+ + EA
Sbjct: 289 CKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEAT 348
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNY 281
L+ +M +G PD ++Y + GL + ++L KG P +
Sbjct: 349 YLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKL 408
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
C+ G + +++ + R G+ + ++ +I C + + D++
Sbjct: 409 CESGKLEILSKVISSLHR-GIAGDADVWSVMIPTMCKEPVISDSI 452
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 162/355 (45%), Gaps = 30/355 (8%)
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
T I + AIG F K+E GFK + + ++D+L K V +A ++ +M
Sbjct: 164 TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 236 TGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
KK PD+ +++ +++ + +E + R + +
Sbjct: 224 K---------------------------KKRFEPDIKSYTILLEGWGQELNLLRVDEVNR 256
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
M G EP+V Y +INAHC + ++A++ ++ M + C PS + +LI+G K
Sbjct: 257 EMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEK 316
Query: 356 KMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYA 415
K++ A+ + G + T+NALVG +C + A + + M+ G P+ TY
Sbjct: 317 KLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376
Query: 416 IILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK 475
IIL L + EA +Y + M+ + ++ Y IM+ C+ RL A + + ++ K
Sbjct: 377 IILHHLIRMQRSKEAYEVY---QTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGK 433
Query: 476 GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
G+ + ++ ++ LC E LD+A + +M + G P ++ Q LL G
Sbjct: 434 GVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEG 488
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 11/311 (3%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
F ++ + + AI +M G + +S F +++ L + V M
Sbjct: 165 FALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMK 224
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
K EPDI + T ++ G E N+ + + M + G+ + +G IIN CK
Sbjct: 225 KKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYE 284
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
AI +F ++E R K ++ ++++ L + +N+AL + G + TYN L
Sbjct: 285 EAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALV 344
Query: 252 RGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
R ++ KG+ P+ T+ I+ + + + R++ + E
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIR---MQRSKEAYEVYQTMSCE 401
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P V TY ++ C ++++ A+K++D M KG LP +++LI C K+D+A
Sbjct: 402 PTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEY 461
Query: 364 LGEMVNKGLTP 374
EM++ G+ P
Sbjct: 462 FNEMLDVGIRP 472
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 153/356 (42%), Gaps = 32/356 (8%)
Query: 206 KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK 265
K + ++ L G++ ++ W+E KG + YN L L
Sbjct: 91 KLSPALIEEVLKKLSNAGVLALSVFKWAE-NQKGFKHTTSNYNALIESL----------- 138
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
G + ++VD+ + ++++ T+ + + ++++A
Sbjct: 139 GKIKQFKLIWSLVDDMKAKKLLSKE-----------------TFALISRRYARARKVKEA 181
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
+ + M G + +N ++ K + + A + +M K PDI ++ L+ G
Sbjct: 182 IGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEG 241
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
+ + L E+ M+ G PD + Y II++ K Y EA+ + E+E+ N
Sbjct: 242 WGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPS 301
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
I+ +++GL S +L DA EFF ++ G ++ TY +V C ++DA + +
Sbjct: 302 PHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVD 361
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+M KG PN TY++ + L+R + RS++ ++ + +T E+++ F
Sbjct: 362 EMRLKGVGPNARTYDIILHHLIR---MQRSKEAYEVYQTMSCEPTVSTYEIMVRMF 414
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 124/542 (22%), Positives = 233/542 (42%), Gaps = 26/542 (4%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKM-KHYTTAISLVKRMHSL 98
L S DLKT++ FF N F + + F ++ +V K+ + Y + +++R+
Sbjct: 46 LRESPADLKTLNF---FFWCAKQNNYFHDDRAFDHMVGVVEKLTREYYSIDRIIERLKIS 102
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
G E F +++ R D V M G P+ + +++ V A
Sbjct: 103 GCEIKPRVFLLLLEIFWRGHIYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGA 162
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY---FKKVEGRGFKFDVPVYTAI 215
L + + + +R N ++ ++ C G +G K++ G GF + + I
Sbjct: 163 LEI---FEGIRFR-NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQI 218
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGI 267
+ C+ G V+EA + M GI V ++ L G F K+++ G
Sbjct: 219 LRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGC 278
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
P++ T+++++ + GM+ A ++ + G+ P++ N +I+ + + ++A K
Sbjct: 279 SPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARK 338
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
V+ S+ + +P T+ +++ C K D + + G D+ T N L F
Sbjct: 339 VFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTGNLLSNCFS 395
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL--EKMNLDRH 445
K G A +++S M D TY + L L + A+ +Y+ + EK +LD H
Sbjct: 396 KIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAH 455
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
+S ++D L G+ A F + +DV +YT+ ++GL R +++A L
Sbjct: 456 F--HSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCC 513
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNK 565
DM+E G PN TY + GL + + + K L+ +G D T + + S +
Sbjct: 514 DMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNTKFQVYSLLSRYR 573
Query: 566 AD 567
D
Sbjct: 574 GD 575
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 186/405 (45%), Gaps = 18/405 (4%)
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
M E G + +I K G ++ F+K++ G + + Y ++ + + G
Sbjct: 176 MPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGR 235
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL--------KKGIMPDVHTFSA 276
A +++M +G++P TYN + G F R + +GI PD TF+
Sbjct: 236 YMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNT 295
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
+++ +C+ + AE+L M + P+V +Y ++I + D++ D +++++ M G
Sbjct: 296 MINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSG 355
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP-DICTWNALVGGFCKAGMPLAA 395
P+ TY+TL+ G C KM +A ++L M+ K + P D + L+ KAG AA
Sbjct: 356 IEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAA 415
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL-EKMNLDRH-------IT 447
E++ M + Y ++++ K Y A+ L L EK + RH +
Sbjct: 416 TEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS 475
Query: 448 IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
Y+ +++ LC+ G+ A F L +G++ D +++G +EG D + ++L M
Sbjct: 476 AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIM 534
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
+G P Y L ++ + +G+ ++ L M G D++
Sbjct: 535 SRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSS 579
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 188/462 (40%), Gaps = 73/462 (15%)
Query: 145 IVNGLCAEGNVEQALGLAMRMDEMGY-RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGR 203
+ N L +E AL + G R + TH +I L +V + A + +
Sbjct: 120 VYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEK 179
Query: 204 GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL 263
G +D ++ +++S K G+V E++ ++ +M G++ + +YN L
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSL------------- 226
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
F I+ + G A+R M GVEP TYN ++ L +++
Sbjct: 227 ----------FKVIL----RRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLE 272
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA----------------------- 360
A++ ++ M +G P T+NT+I+G+C+ KKMD+A
Sbjct: 273 TALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMI 332
Query: 361 ------------MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST-MQKHGQ 407
+ + EM + G+ P+ T++ L+ G C AG + AK ++ M KH
Sbjct: 333 KGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIA 392
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
D + +L K A + + + +N+ Y ++++ C A +
Sbjct: 393 PKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIK 452
Query: 468 FFSGLQAK--------GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
L K L+++ Y +++ LC G AE L + ++G D
Sbjct: 453 LLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALN 512
Query: 520 NLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
NL ++G + G+ S + L++M +G ++ ELLI +
Sbjct: 513 NL-IRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSY 553
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/502 (22%), Positives = 194/502 (38%), Gaps = 63/502 (12%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
F VLI K ++ + ++M LG+E ++ + + R R + M
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
G+EP T ++ G +E AL M G + T +ING C+
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A F +++G V YT ++ V++ L ++ EM GI+P+ TY+ L
Sbjct: 308 EAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLL 367
Query: 252 RGLFHCSRGKVLK----------KGIMP-DVHTFSAIVDNYCKEGMIARAERLMGFMARV 300
GL C GK+++ K I P D F ++ + K G +A A ++ MA +
Sbjct: 368 PGL--CDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATL 425
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL----------PSTVTYNTLIHG 350
V Y LI C A+K+ D++I K + PS YN +I
Sbjct: 426 NVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEY 483
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
C + KA L +++ +G+ D N L+ G K G P ++ E++ M + G
Sbjct: 484 LCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRG---- 538
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
+ R Y +++ S G DA+
Sbjct: 539 -------------------------------VPRESNAYELLIKSYMSKGEPGDAKTALD 567
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK--GCPPNDCTYNLFVQGLLR 528
+ G D + +++ L +G + A +++M M +K G N ++ LL
Sbjct: 568 SMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLM 627
Query: 529 RGDISRSEKYLQLMKGKGFSAD 550
RG + + + L+ G +AD
Sbjct: 628 RGHVEEALGRIDLLNQNGHTAD 649
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/488 (21%), Positives = 196/488 (40%), Gaps = 38/488 (7%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A+ FF M P+ F +IN + K A L M I ++T
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM--DE 167
+I + R D G + M G+EP+ T +T++ GLC G + +A + M
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH 390
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
+ + NS +++ K G+ +AA K + + Y ++++ CK N
Sbjct: 391 IAPKDNSIFLKLLVSQ-SKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNR 449
Query: 228 ALGLWSEMTGKGI--------QPDVVTYNCLTRGLFHCSRG----------KVLKKGIMP 269
A+ L + K I + + YN + L C+ G +++K+G+
Sbjct: 450 AIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYL--CNNGQTAKAEVLFRQLMKRGVQ- 506
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
D + ++ + KEG + ++ M+R GV Y LI ++ + + DA
Sbjct: 507 DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTAL 566
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK--GLTPDICTWNALVGGFC 387
DSM+ G +P + + ++I + ++ A ++ M++K G+ ++ ++
Sbjct: 567 DSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALL 626
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
G A I + ++G D LD L +L L+R ++
Sbjct: 627 MRGHVEEALGRIDLLNQNGHTAD-------LDSLLSVLSEKGKTIAALKLLDFGLERDLS 679
Query: 448 I----YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+ Y +LD L G+ +A + KG D + +++ L +EG A+ +
Sbjct: 680 LEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQEGNTKQAD-V 738
Query: 504 LMDMEEKG 511
L M +KG
Sbjct: 739 LSRMIKKG 746
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 115/253 (45%), Gaps = 15/253 (5%)
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP-DI 376
LQ+ ++D + +D ++ YN L HG KK++ A+ GL D
Sbjct: 104 LQNSIRDLVPEWDH---------SLVYNVL-HG---AKKLEHALQFFRWTERSGLIRHDR 150
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
T ++ + A+ ++ M + G D + ++++ K E+V ++++
Sbjct: 151 DTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQK 210
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
++ + ++R I Y+ + + GR A+ +F+ + ++G++ TY +M+ G
Sbjct: 211 MKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLR 270
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT-TE 555
L+ A + DM+ +G P+D T+N + G R + +EK MKG + T
Sbjct: 271 LETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTT 330
Query: 556 LLINFFSGNKADN 568
++ + + ++ D+
Sbjct: 331 MIKGYLAVDRVDD 343
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/452 (21%), Positives = 204/452 (45%), Gaps = 21/452 (4%)
Query: 139 IVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
+ + T ++N L G +A + + E G+R + ++ ++ + +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 199 KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCS 258
+VE G K D + A++++ + G + +A+ +M G+ P TYN L +G
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 259 RGK--------VLKKG---IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVF 307
+ + +L++G + P++ TF+ +V +CK+ + A ++ M GV P+
Sbjct: 165 KPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTV 224
Query: 308 TYNSLINAHCLQ-DQMQDAMKVYDSMIYK-GCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
TYN++ + + + ++ +V + M+ K P+ T ++ G+C+ ++ + +
Sbjct: 225 TYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVR 284
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
M + ++ +N+L+ GF + E+++ M++ D ITY+ +++
Sbjct: 285 RMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAG 344
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
+ +A +++E+ K + YSI+ G K A E L + + +V +T
Sbjct: 345 YMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFT 403
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
++ G C G +DDA ++ M + G PN T+ + G L ++E+ LQ+M+G
Sbjct: 404 TVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGC 463
Query: 546 GFSADATTTELLINFF-------SGNKADNTF 570
G + +T LL + NKA N
Sbjct: 464 GVKPENSTFLLLAEAWRVAGLTDESNKAINAL 495
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 195/474 (41%), Gaps = 35/474 (7%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R +L++ + + A F +A P++ +T L+ + K Y + S+V +
Sbjct: 48 RTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVE 107
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
G + DS F VIN + L M ++GL P T T++ G G E
Sbjct: 108 QSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPE 167
Query: 157 QA---LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
++ L L + + N T ++ CK A KK+E G + D Y
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT 273
I + G E + SE+ K V+K+ P+ T
Sbjct: 228 TIATCYVQKG---ETVRAESEVVEK----------------------MVMKEKAKPNGRT 262
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCL---QDQMQDAMKVYD 330
+V YC+EG + R + M + VE N+ +NSLIN +D + + + +
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMK 322
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
K +TY+T+++ W M+KA + EMV G+ PD ++ L G+ +A
Sbjct: 323 ECNVKA---DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 379
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
P A+EL+ T+ + P+ + + ++ G +A+ ++ ++ K + +I +
Sbjct: 380 EPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFE 438
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
++ G + A E ++ G+K + T+ ++ + GL D++ + +
Sbjct: 439 TLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAI 492
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 147/339 (43%), Gaps = 30/339 (8%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRT--DLGF 124
PNI+ F VL+ K K A +VK+M G+ D+ T+ + C + T
Sbjct: 186 PNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESE 245
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
V ++ K +P+ T +V G C EG V L RM EM N ++ING
Sbjct: 246 VVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
+V + ++ K DV Y+ +M++ G + +A ++ EM
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM--------- 356
Query: 245 VTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
+K G+ PD H +S + Y + +AE L+ + V P
Sbjct: 357 ------------------VKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRP 397
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
NV + ++I+ C M DAM+V++ M G P+ T+ TL+ G+ ++K+ KA +L
Sbjct: 398 NVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVL 457
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
M G+ P+ T+ L + AG+ + + I+ ++
Sbjct: 458 QMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALK 496
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/455 (21%), Positives = 195/455 (42%), Gaps = 22/455 (4%)
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
T ++N L R V + + G P +++ TT++ + + + +++
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS---LCKDGL 224
G + +S A+IN + GN A+ K++ G Y ++ K
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV------LKK----GIMPDVHTF 274
+E L L E + P++ T+N L + C + KV +KK G+ PD T+
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAW--CKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 275 SAIVDNYCKEGMIARAER--LMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
+ I Y ++G RAE + + + +PN T ++ +C + +++D ++ M
Sbjct: 227 NTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
+ V +N+LI+G+ ++ D +L M + D+ T++ ++ + AG
Sbjct: 287 KEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYM 346
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR--HITIYS 450
A ++ M K G PD Y+I+ G + +A L LE + ++ ++ I++
Sbjct: 347 EKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEEL---LETLIVESRPNVVIFT 403
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
++ G CS G + DA F+ + G+ ++ T+ ++ G AE++L M
Sbjct: 404 TVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGC 463
Query: 511 GCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
G P + T+ L + G S K + +K K
Sbjct: 464 GVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK 498
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 167/358 (46%), Gaps = 8/358 (2%)
Query: 200 VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR 259
++ R + + +T ++ + GL +EA+ ++ M G PD + ++ + L R
Sbjct: 177 MKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRR 236
Query: 260 GK-------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
LK PDV ++ +V +C+ G I+ AE++ M G+EPNV+TY+ +
Sbjct: 237 ASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIV 296
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
I+A C Q+ A V+ M+ GC P+ +T+N L+ K + +K + + +M G
Sbjct: 297 IDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGC 356
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
PD T+N L+ C+ A ++++TM K + T+ I + K A
Sbjct: 357 EPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHR 416
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
+Y ++ + + + Y+I++ + + K ++ +V TY ++V C
Sbjct: 417 MYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC 476
Query: 493 REGLLDDAEQLLMDM-EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
G ++A +L +M EEK P+ Y + + L R G + + E+ ++ M KG A
Sbjct: 477 GMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGLVA 534
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 185/415 (44%), Gaps = 33/415 (7%)
Query: 64 NPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLG 123
+P P + +I+L K++ + A L+ M S +E TFTI+I R
Sbjct: 150 SPHP----YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEA 205
Query: 124 FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIING 183
M G PD + + +++ L + +A + + + + + ++ G
Sbjct: 206 VHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRG 264
Query: 184 LCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
C+ G S A FK+++ G + +V Y+ ++D+LC+ G ++ A ++++M G P+
Sbjct: 265 WCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPN 324
Query: 244 VVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
+T+N L R VH K G + ++ M ++G E
Sbjct: 325 AITFNNLMR------------------VHV---------KAGRTEKVLQVYNQMKKLGCE 357
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P+ TYN LI AHC + +++A+KV ++MI K C + T+NT+ K + ++ A +
Sbjct: 358 PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRM 417
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
+M+ P+ T+N L+ F + ++ M P+ TY +++
Sbjct: 418 YSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 477
Query: 424 CHFYPEAVSLYREL-EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
+ A L++E+ E+ L +++Y ++L L G+LK E + KGL
Sbjct: 478 MGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 167/369 (45%), Gaps = 19/369 (5%)
Query: 213 TAIMDSLCKDGLVNEALGL-WSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM--- 268
T+ D++ L AL L +S++ + P VV C+ G L + +
Sbjct: 81 TSPNDAILNPSLTLHALSLDFSQIETSQVSPSVV--RCVIEKCGSVRHGIPLHQSLAFFN 138
Query: 269 ----------PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCL 318
H ++ ++D K A L+ M VE ++ T+ LI +
Sbjct: 139 WATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVR 198
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
+A+ ++ M GC+P + ++ +I + ++ +A S + ++ PD+
Sbjct: 199 AGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIV 257
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
+ LV G+C+AG A+++ M+ G P+ TY+I++D L +C A ++ ++
Sbjct: 258 YTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML 317
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
+ ++ ++ GR + + ++ ++ G + D TY +++ CR+ L+
Sbjct: 318 DSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLE 377
Query: 499 DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK-YLQLMKGKGFSADATTTELL 557
+A ++L M +K C N T+N + + ++ D++ + + Y ++M+ K + T +L
Sbjct: 378 NAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC-EPNTVTYNIL 436
Query: 558 INFFSGNKA 566
+ F G+K+
Sbjct: 437 MRMFVGSKS 445
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/299 (19%), Positives = 137/299 (45%), Gaps = 1/299 (0%)
Query: 265 KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQD 324
+ + + TF+ ++ Y + G+ + A M G P+ ++ +I+ + + +
Sbjct: 180 RNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASE 239
Query: 325 AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
A +DS+ + P + Y L+ GWC+ ++ +A + EM G+ P++ T++ ++
Sbjct: 240 AQSFFDSLKDR-FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVID 298
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
C+ G A ++ + M G P+ IT+ ++ K + + +Y +++K+ +
Sbjct: 299 ALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEP 358
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
Y+ +++ C L++A + + + K +++ T+ + + + ++ ++ A ++
Sbjct: 359 DTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMY 418
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSG 563
M E C PN TYN+ ++ + K + M K + T LL+ F G
Sbjct: 419 SKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCG 477
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
YN +I K+++ D A L+ M ++ + I T+ L+ + +AG+ A + M+
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRME 213
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
+G +PD+I ++I++ L + EA S + L K + + +Y+ ++ G C G +
Sbjct: 214 DYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSL-KDRFEPDVIVYTNLVRGWCRAGEIS 272
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN-------- 515
+A + F ++ G++ +V+TY+I++ LCR G + A + DM + GC PN
Sbjct: 273 EAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLM 332
Query: 516 ---------------------------DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
TYN ++ R ++ + K L M K
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 549 ADATTTELLINFFSGNKADN 568
+A+T + + + N
Sbjct: 393 VNASTFNTIFRYIEKKRDVN 412
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 138/308 (44%), Gaps = 14/308 (4%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPF-PNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
++S++ + A FF+ + + F P++ +T L+ + + A + K M
Sbjct: 227 VISNLSRKRRASEAQSFFDSLK--DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLA 284
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
GIE + +T++IVI+ LCR + V M G P+ +T ++ G E+
Sbjct: 285 GIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKV 344
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L + +M ++G ++ T+ +I C+ N A+ + + + + + I
Sbjct: 345 LQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRY 404
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--VLK-------KGIMP 269
+ K VN A ++S+M +P+ VTYN L R +F S+ VLK K + P
Sbjct: 405 IEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR-MFVGSKSTDMVLKMKKEMDDKEVEP 463
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVG-VEPNVFTYNSLINAHCLQDQMQDAMKV 328
+V+T+ +V +C G A +L M + P++ Y ++ Q++ ++
Sbjct: 464 NVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEEL 523
Query: 329 YDSMIYKG 336
+ MI KG
Sbjct: 524 VEKMIQKG 531
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/519 (24%), Positives = 212/519 (40%), Gaps = 42/519 (8%)
Query: 61 AAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLS-- 118
A +PFP + ++ +L + T SL + + +V+ L R S
Sbjct: 19 AKNSPFPQLCNVLLVASLSKTLSQSGT--------RSLDANSIPISEPVVLQILRRNSID 70
Query: 119 -RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTH 177
L F + G + + I +C G + + L M E G +
Sbjct: 71 PSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMA 130
Query: 178 GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM-- 235
+++ L + G +A+G +E G + VY +++ +L K + AL + ++
Sbjct: 131 KILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLE 190
Query: 236 ---------TGKGI----QPDVVTYNCLTRGLFHCSRGKVLK---------KGIMPDVHT 273
TG+ I P V N L GL K K D +
Sbjct: 191 ASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWS 250
Query: 274 FSAIVDNYCKEGMIARAERLMGFMAR------VGVEPNVFTYNSLINAHCLQDQMQDAMK 327
++ + + G + A L M P++ TYNSLI+ CL + +DA+
Sbjct: 251 YNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALI 310
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
V+D + G P TY LI G CK +MD AM + GEM G PD +N L+ G
Sbjct: 311 VWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTL 370
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT 447
KA A +L M + G TY I++DGLF+ +L+ +L+K
Sbjct: 371 KARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAI 430
Query: 448 IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
+SI+ LC G+L+ A + ++ +G +D+ T + ++ G ++G D E+L+ +
Sbjct: 431 TFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI 490
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
E PN +N V+ L+R S+ + Y + KG
Sbjct: 491 REGNLVPNVLRWNAGVEASLKRPQ-SKDKDYTPMFPSKG 528
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/513 (22%), Positives = 215/513 (41%), Gaps = 48/513 (9%)
Query: 50 VDAAVDFFNKMAAINPF------PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
+DAA+ F +M + P+I + LI+++ A+ + + G E D
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
+ T+ I+I C+ R D + G M G PD + +++G V +A L
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFE 383
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
+M + G R + +T+ +I+GL + G A F ++ +G D ++ + LC++G
Sbjct: 384 KMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREG 443
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG-------KVLKKG-IMPDVHTFS 275
+ A+ L EM +G D+VT + L G R K +++G ++P+V ++
Sbjct: 444 KLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWN 503
Query: 276 AIVDNYCKE---------GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
A V+ K M + M+ VG E + + + ++D +
Sbjct: 504 AGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEV---SPMEDDPWSSS 560
Query: 327 KVYDSMIYKGCLPSTV-------------------TYNTLIHGWCKIKKMDKAMSLLGEM 367
D + ++ P + NT + + + A L E+
Sbjct: 561 PYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLF-EI 619
Query: 368 VNKGLTPDIC--TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
N D+ T+N+++ F K G A+ ++ M ++ D TY +I+ GL K
Sbjct: 620 FNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMG 679
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
A ++ L K I +Y+ +++ L RL +A + F +++ G+ DV +Y
Sbjct: 680 RADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYN 739
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
M++ + G L +A + L M + GC PN T
Sbjct: 740 TMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 175/409 (42%), Gaps = 24/409 (5%)
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
GY+ ++ + I +C+ G ++ G D + ++DSL + G A
Sbjct: 87 GYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESA 146
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCK--EGM 286
LG+ M G +CL ++ ++KK H + K E
Sbjct: 147 LGVLDYMEELG--------DCLNPSVYDSVLIALVKK------HELRLALSILFKLLEAS 192
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI-YKGCLPSTVTYN 345
++ G + V P N L+ D + +V++ + K T +YN
Sbjct: 193 DNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYN 252
Query: 346 TLIHGWCKIKKMDKAMSLLGEMVNKG------LTPDICTWNALVGGFCKAGMPLAAKELI 399
IHG+ +D A+SL EM + PDICT+N+L+ C G A +
Sbjct: 253 ICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVW 312
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
++ G PD TY I++ G K + +A+ +Y E++ +Y+ +LDG
Sbjct: 313 DELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKA 372
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
++ +A + F + +G++ +TY I++ GL R G + L D+++KG + T+
Sbjct: 373 RKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITF 432
Query: 520 NLFVQGLLRRGDISRSEKYLQLMKGKGFSAD-ATTTELLINFFSGNKAD 567
++ L R G + + K ++ M+ +GFS D T + LLI F + D
Sbjct: 433 SIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 194/473 (41%), Gaps = 56/473 (11%)
Query: 62 AINPFPNIKEFTVLINLVVKMKHYTTAISLVKR-----------------MHSLGIEADS 104
+I+P + F +L KH TA S + R M G+ D
Sbjct: 68 SIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQ 127
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMG--LEPDIVTLTTIVNGLCAEGNVEQALGLA 162
I+++ L R + + VL M ++G L P + +++ L + + AL +
Sbjct: 128 TMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYD--SVLIALVKKHELRLALSIL 185
Query: 163 MRM---------DEMG------YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEG-RGFK 206
++ D+ G Y + ++ GL + S F+K++G + FK
Sbjct: 186 FKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFK 245
Query: 207 FDVPVYTAIMDSLCKDGLVNEALGLWSEMT------GKGIQPDVVTYNCLTRGLFHCSRG 260
FD Y + G ++ AL L+ EM G PD+ TYN L L C G
Sbjct: 246 FDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVL--CLFG 303
Query: 261 KV---------LK-KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
K LK G PD T+ ++ CK + A R+ G M G P+ YN
Sbjct: 304 KAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYN 363
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
L++ ++ +A ++++ M+ +G S TYN LI G + + + +L ++ K
Sbjct: 364 CLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKK 423
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
G D T++ + C+ G A +L+ M+ G D +T + +L G K +
Sbjct: 424 GQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWK 483
Query: 431 VSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
L + + + NL ++ ++ ++ + KD +++ +KG +D+ +
Sbjct: 484 EKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKD-KDYTPMFPSKGSFLDIMS 535
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%)
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
+T+++++ ++ K+G A ++ M ++ TYN +I + A V D
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
+ +G V YNTLI+ K ++D+A L M + G+ PD+ ++N ++ KAG
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 392 PLAAKELISTMQKHGQLPDRITYAII 417
A + + M G LP+ +T I+
Sbjct: 751 LKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 99/214 (46%), Gaps = 19/214 (8%)
Query: 94 RMHSLGIEADSFTFTIVINCLC-RLSRTDLGF-CVLGLMFK-MGLEPDIVTLT--TIVNG 148
R + + DSF ++ L LS+ DL C L +F MG+ D+ + T ++++
Sbjct: 581 RGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVT-DLTSYTYNSMMSS 639
Query: 149 LCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD 208
+G + A G+ +M E + T+ II GL K+G A ++ +G D
Sbjct: 640 FVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLD 699
Query: 209 VPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV------ 262
+ +Y ++++L K ++EA L+ M GI PDVV+YN + + GK+
Sbjct: 700 IVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE--VNSKAGKLKEAYKY 757
Query: 263 ----LKKGIMPDVHTFSAIVDNYCKEGMIARAER 292
L G +P+ H I+D KE AR ++
Sbjct: 758 LKAMLDAGCLPN-HVTDTILDYLGKEMEKARFKK 790
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 144/325 (44%), Gaps = 10/325 (3%)
Query: 232 WSEMTGKGIQPDVVTYNCLTRGLF----HCSRGKVLK--KGIMPDV--HTFSAIVDNYCK 283
W+ + P + Y L + L + S K+LK K + D+ T I++ Y K
Sbjct: 100 WAR-SNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGK 158
Query: 284 EGMIARAERLM-GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
G + +A L G +G + V YNSL++A C A + MI KG P
Sbjct: 159 NGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKR 218
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
TY L++GWC KM +A L EM +G P + L+ G AG +AKE++S M
Sbjct: 219 TYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKM 278
Query: 403 QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
K G +PD T+ I+++ + K + +Y K+ L I Y ++ + G++
Sbjct: 279 TKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKI 338
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLF 522
+A + G K Y +++G+CR G+ DDA DM+ K PPN Y +
Sbjct: 339 DEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTML 398
Query: 523 VQGLLRRGDISRSEKYLQLMKGKGF 547
+ R G + YL M G
Sbjct: 399 ITMCGRGGKFVDAANYLVEMTEMGL 423
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 139/356 (39%), Gaps = 16/356 (4%)
Query: 48 KTVDAAVDFFNKMAAINP--FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSF 105
++ + ++ FFN A NP P E+ L + K Y + ++K+M L ++
Sbjct: 89 RSSNDSLRFFN-WARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGE 147
Query: 106 TFTIVINCLCRLSRTDLGFCVL-GLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR 164
T +I + D + G+ +G + + ++++ LC A L R
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
M G + + T+ ++NG C G A + ++ RGF +++ L G
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMPDVHTF 274
+ A + S+MT G PD+ T+N L + G+V K G+ D+ T+
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAI--SKSGEVEFCIEMYYTACKLGLCVDIDTY 325
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
++ K G I A RL+ G +P Y +I C DA + M
Sbjct: 326 KTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKV 385
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
K P+ Y LI + K A + L EM GL P ++ + G G
Sbjct: 386 KAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGG 441
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 130/321 (40%), Gaps = 44/321 (13%)
Query: 215 IMDSLCKDGLVNEALGLWSEMTGK-GIQPDVVTYNCLTRGL-----FHCSRG---KVLKK 265
I++ K+G V++A+ L++ + G Q V YN L L FH + ++++K
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
G+ PD T++ +V+ +C G + A+ + M+R G P + LI ++ A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
++ M G +P T+N LI K +++ + + GL DI T+ L+
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
K G A L++ + G P YA I+ G
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKG------------------------- 366
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
+C G DA FFS ++ K + YT+++ R G DA L+
Sbjct: 367 ----------MCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLV 416
Query: 506 DMEEKGCPPNDCTYNLFVQGL 526
+M E G P +++ GL
Sbjct: 417 EMTEMGLVPISRCFDMVTDGL 437
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 413 TYAIILDGLFKCHFYPEAVSLYRELEK-MNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
T I++ K +AV L+ + K + + + +Y+ +L LC A
Sbjct: 148 TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRR 207
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
+ KGLK D TY I+V G C G + +A++ L +M +G P +L ++GLL G
Sbjct: 208 MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGY 267
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ +++ + M GF D T +LI S
Sbjct: 268 LESAKEMVSKMTKGGFVPDIQTFNILIEAIS 298
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 9/351 (2%)
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+ +S + + S A F ++ G K V ++ SLC VN A
Sbjct: 134 FEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQ 193
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNY 281
+ + G GI P TY+ L RG ++L++ + D+ ++A++D
Sbjct: 194 EFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDAL 253
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
CK G + ++ M +G++P+ +++ I+A+C + A KV D M +P+
Sbjct: 254 CKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
T+N +I CK +K+D A LL EM+ KG PD T+N+++ C A +L+S
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC-SYG 460
M + LPDR TY ++L L + + A ++ + + + Y++M+ GL G
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
+L++A +F + +G+ T ++ L G +D + L ME
Sbjct: 434 KLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKMERSS 484
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 165/387 (42%), Gaps = 42/387 (10%)
Query: 70 KEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGL 129
K+F +L + +++ + Y E S F IV R +
Sbjct: 116 KQFALLWDFLIEAREYNY------------FEISSKVFWIVFRAYSRANLPSEACRAFNR 163
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M + G++P + L +++ LC + +V A + G ++ T+ ++ G ++ +
Sbjct: 164 MVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRD 223
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
S A F ++ R D+ Y A++D+LCK G V+ ++ EM G++
Sbjct: 224 ASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK-------- 275
Query: 250 LTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
PD ++F+ + YC G + A +++ M R + PNV+T+
Sbjct: 276 -------------------PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTF 316
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
N +I C +++ DA + D MI KG P T TYN+++ C ++++A LL M
Sbjct: 317 NHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDR 376
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
PD T+N ++ + G A E+ M + P TY +++ GL + E
Sbjct: 377 TKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLE 436
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGL 456
Y E M +D I YS ++ L
Sbjct: 437 EACRYFE---MMIDEGIPPYSTTVEML 460
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 141/305 (46%), Gaps = 1/305 (0%)
Query: 260 GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQ 319
++++ GI P V ++ + C + + A+ G G+ P+ TY+ L+
Sbjct: 162 NRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARI 221
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
A KV+D M+ + C+ + YN L+ CK +D + EM N GL PD ++
Sbjct: 222 RDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSF 281
Query: 380 NALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
+ +C AG +A +++ M+++ +P+ T+ I+ L K +A L E+ +
Sbjct: 282 AIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQ 341
Query: 440 MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDD 499
+ Y+ ++ C + + A + S + D TY ++++ L R G D
Sbjct: 342 KGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDR 401
Query: 500 AEQLLMDMEEKGCPPNDCTYNLFVQGLLR-RGDISRSEKYLQLMKGKGFSADATTTELLI 558
A ++ M E+ P TY + + GL+R +G + + +Y ++M +G +TT E+L
Sbjct: 402 ATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLR 461
Query: 559 NFFSG 563
N G
Sbjct: 462 NRLVG 466
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 135/293 (46%), Gaps = 12/293 (4%)
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
F + Y + + + A R M G++P V + L+++ C + + A + +
Sbjct: 140 VFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKA 199
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
G +PS TY+ L+ GW +I+ A + EM+ + D+ +NAL+ CK+G
Sbjct: 200 KGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV 259
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA---VSLYRELEKM---NLDRHI 446
++ M G PD ++AI + H Y +A S Y+ L++M +L ++
Sbjct: 260 DGGYKMFQEMGNLGLKPDAYSFAIFI------HAYCDAGDVHSAYKVLDRMKRYDLVPNV 313
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
++ ++ LC ++ DA + KG D +TY ++ C ++ A +LL
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
M+ C P+ TYN+ ++ L+R G R+ + + M + F T ++I+
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 426
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 137/319 (42%), Gaps = 28/319 (8%)
Query: 57 FNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCR 116
FN+M P + + L++ + KH A + GI + T++I++ R
Sbjct: 161 FNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWAR 220
Query: 117 LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
+ V M + D++ +++ LC G+V+ + M +G + ++Y+
Sbjct: 221 IRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYS 280
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
I+ C G+ +A +++ +V + I+ +LCK+ V++A L EM
Sbjct: 281 FAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMI 340
Query: 237 GKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
KG PD TYN + +HC ++C+ + RA +L+
Sbjct: 341 QKGANPDTWTYNSIM--AYHC----------------------DHCE---VNRATKLLSR 373
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK- 355
M R P+ TYN ++ + A ++++ M + P+ TY +IHG + K
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKG 433
Query: 356 KMDKAMSLLGEMVNKGLTP 374
K+++A M+++G+ P
Sbjct: 434 KLEEACRYFEMMIDEGIPP 452
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 137/340 (40%), Gaps = 48/340 (14%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
+LL S+ D K V+ A +FF K P+ K +++L+ +++ + A + M
Sbjct: 178 QLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLER 237
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
D + +++ LC+ D G+ + M +GL+PD + ++ C G+V A
Sbjct: 238 NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
+ RM N YT II LC
Sbjct: 298 YKVLDRMKRYDLVPNVYTFNHIIKTLC--------------------------------- 324
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR----------GKVLKKGIM 268
K+ V++A L EM KG PD TYN + +HC ++ + +
Sbjct: 325 --KNEKVDDAYLLLDEMIQKGANPDTWTYNSIM--AYHCDHCEVNRATKLLSRMDRTKCL 380
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD-QMQDAMK 327
PD HT++ ++ + G RA + M+ P V TY +I+ + ++++A +
Sbjct: 381 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACR 440
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
++ MI +G P + T L + +MD L G+M
Sbjct: 441 YFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKM 480
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/528 (20%), Positives = 231/528 (43%), Gaps = 55/528 (10%)
Query: 50 VDAAVDFFNKMAAINPFPNIKE-FTVL-------------INLVVKMKHYTTAISLVKRM 95
+D VD +A+I+ N KE F++L ++L+ + + +++L+ +
Sbjct: 86 LDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRFMVSLLSRENDWQRSLALLDWV 145
Query: 96 HSLGIEADS-FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN 154
H S F + +V+ + R + D+ + M + L PD T +T++ EG
Sbjct: 146 HEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGM 205
Query: 155 VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
+ AL +M++ + + +I ++ + S AI F +++ G D+ Y +
Sbjct: 206 FDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNS 265
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKG 266
+++ K L EA L EM G+ P+ V+Y+ L + ++ +
Sbjct: 266 MINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVN 325
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
D+ T + ++D Y + M+ A+RL + ++ +EPNV +YN+++ + + +A+
Sbjct: 326 CALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAI 385
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
++ M K + VTYNT+I + K + +KA +L+ EM ++G+ P+ T++ ++ +
Sbjct: 386 HLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIW 445
Query: 387 CKAGMPLAAKELISTMQKHG-------------------------------QLPDRITYA 415
KAG A L ++ G +LPD I
Sbjct: 446 GKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRE 505
Query: 416 IILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK 475
+ L K EA ++R+ + + I+++ M++ R + E F ++
Sbjct: 506 TAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTA 565
Query: 476 GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCP-PNDCTYNLF 522
G D +++ ++ + A+ + +M+E+GC P++ + +
Sbjct: 566 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/435 (20%), Positives = 197/435 (45%), Gaps = 13/435 (2%)
Query: 140 VTLTTIVNGLCAEGNVEQALGLAMRM-DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
+++ +V+ L E + +++L L + +E Y + + + ++ + + A G F
Sbjct: 120 LSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFD 179
Query: 199 KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL---TRGLF 255
++ R D Y+ ++ S K+G+ + AL +M + D+V Y+ L +R L
Sbjct: 180 EMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLC 239
Query: 256 HCSRG-----KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
S+ ++ + GI PD+ ++++++ Y K + A L+ M GV PN +Y+
Sbjct: 240 DYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYS 299
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
+L++ + + +A+ V+ M C T N +I + ++ + +A L +
Sbjct: 300 TLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKM 359
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
+ P++ ++N ++ + +A + A L MQ+ + +TY ++ K + +A
Sbjct: 360 DIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKA 419
Query: 431 VSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQG 490
+L +E++ ++ + YS ++ G+L A F L++ G++ID Y M+
Sbjct: 420 TNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVA 479
Query: 491 LCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD 550
R GL+ A++LL +++ P + + + G + + G D
Sbjct: 480 YERVGLMGHAKRLLHELKLPDNIPRETAITILAKA----GRTEEATWVFRQAFESGEVKD 535
Query: 551 ATTTELLINFFSGNK 565
+ +IN +S N+
Sbjct: 536 ISVFGCMINLYSRNQ 550
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 202/471 (42%), Gaps = 14/471 (2%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
D+A+ + KM ++ ++ LI L ++ Y+ AIS+ R+ GI D + +
Sbjct: 207 DSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSM 266
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
IN + ++ M + G+ P+ V+ +T+++ +AL + M E+
Sbjct: 267 INVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNC 326
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
+ T +I+ ++ A F + + +V Y I+ + L EA+
Sbjct: 327 ALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH 386
Query: 231 LWSEMTGKGIQPDVVTYNCLTR----GLFHCSRGKVLK----KGIMPDVHTFSAIVDNYC 282
L+ M K I+ +VVTYN + + + H +++ +GI P+ T+S I+ +
Sbjct: 387 LFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWG 446
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
K G + RA L + GVE + Y ++I A+ M A + ++++ LP +
Sbjct: 447 KAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKR----LLHELKLPDNI 502
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
T I K + ++A + + G DI + ++ + + + E+ M
Sbjct: 503 PRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKM 562
Query: 403 QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
+ G PD A++L+ K + +A ++YRE+++ ++ ML S
Sbjct: 563 RTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDF 622
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLC-REGLLDDAEQLLMDMEEKGC 512
+ F L++ ++ ++V L R L+DA +++ M E+G
Sbjct: 623 EMVESLFQRLESDP-NVNSKELHLVVAALYERADKLNDASRVMNRMRERGI 672
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 140/288 (48%), Gaps = 4/288 (1%)
Query: 261 KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR--VGVEPNVFTYNSLINAHCL 318
++++ G TF+ ++ + C E +A+ + ++ FM P +YN+++N+
Sbjct: 174 EMVQDGFPTTARTFNLLICS-CGEAGLAK-QAVVQFMKSKTFNYRPFKHSYNAILNSLLG 231
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
Q + VY M+ G P +TYN L+ ++ KMD+ L EM G +PD T
Sbjct: 232 VKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYT 291
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
+N L+ K PLAA ++ M++ G P + Y ++DGL + E+
Sbjct: 292 YNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMV 351
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
K + Y++M+ G G L A+E F + KG +VFTY M++GLC G
Sbjct: 352 KAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR 411
Query: 499 DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
+A LL +ME +GC PN Y+ V L + G +S + K ++ M KG
Sbjct: 412 EACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 124/267 (46%), Gaps = 9/267 (3%)
Query: 150 CAE-GNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD 208
C E G +QA+ M+ YR +++ AI+N L V +K++ GF D
Sbjct: 194 CGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPD 253
Query: 209 VPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------G 260
V Y ++ + + G ++ L+ EM G PD TYN L L ++
Sbjct: 254 VLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLN 313
Query: 261 KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
+ + GI P V ++ ++D + G + + + M + G P+V Y +I + +
Sbjct: 314 HMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSG 373
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
++ A +++ M KG LP+ TYN++I G C + +A LL EM ++G P+ ++
Sbjct: 374 ELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYS 433
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQ 407
LV KAG A+++I M K G
Sbjct: 434 TLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 139/322 (43%), Gaps = 14/322 (4%)
Query: 201 EGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG 260
E F+ V Y +M + G L EM G T+N L + C
Sbjct: 141 EQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLL---ICSCGEA 197
Query: 261 KVLKKGIM-----------PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
+ K+ ++ P H+++AI+++ E + M G P+V TY
Sbjct: 198 GLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTY 257
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
N L+ + +M +++D M G P + TYN L+H K K A++ L M
Sbjct: 258 NILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKE 317
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
G+ P + + L+ G +AG A K + M K G PD + Y +++ G +
Sbjct: 318 VGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDK 377
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
A ++RE+ ++ Y+ M+ GLC G ++A ++++G + Y+ +V
Sbjct: 378 AKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVS 437
Query: 490 GLCREGLLDDAEQLLMDMEEKG 511
L + G L +A +++ +M +KG
Sbjct: 438 YLRKAGKLSEARKVIREMVKKG 459
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 108/223 (48%)
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P +YN +++ +K+ + +M+ G +PD+ T+N L+ + G L
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRL 276
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
M + G PD TY I+L L K + A++ ++++ +D + Y+ ++DGL
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
G L+ + F + G + DV YT+M+ G G LD A+++ +M KG PN T
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
YN ++GL G+ + L+ M+ +G + + L+++
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL 439
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 116/284 (40%), Gaps = 27/284 (9%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
AV F K N P + ++N ++ +K Y + K+M G D T+ I++
Sbjct: 203 AVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLW 262
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
RL + D + M + G PD T +++ L AL M E+G
Sbjct: 263 TNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ + +I+GL + GN A + ++ G + DV YT ++ G +++A ++
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAER 292
EMT KG P+V TYN + RGL C G A
Sbjct: 383 REMTVKGQLPNVFTYNSMIRGL---------------------------CMAGEFREACW 415
Query: 293 LMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
L+ M G PN Y++L++ ++ +A KV M+ KG
Sbjct: 416 LLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LL + L +D F++MA P+ + +L++++ K A++ + M +G
Sbjct: 260 LLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVG 319
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
I+ +T +I+ L R + L M K G PD+V T ++ G G +++A
Sbjct: 320 IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAK 379
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ M G N +T+ ++I GLC G A K++E RG + VY+ ++ L
Sbjct: 380 EMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL 439
Query: 220 CKDGLVNEALGLWSEMTGKG 239
K G ++EA + EM KG
Sbjct: 440 RKAGKLSEARKVIREMVKKG 459
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 193/425 (45%), Gaps = 35/425 (8%)
Query: 131 FKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNT 190
F+ E D++ +++ C G E+A+ L M++ G T +I G ++G
Sbjct: 239 FRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKC 298
Query: 191 SAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL 250
AA+ +K+E G DV +TA++ L +G+ +AL ++ +M G+ P+ VT +
Sbjct: 299 DAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVT---I 355
Query: 251 TRGLFHCSRGKVL-----------KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR 299
+ CS KV+ K G + DV +++VD Y K G + A ++ +
Sbjct: 356 MSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVK- 414
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK 359
+V+T+NS+I +C A +++ M P+ +T+NT+I G+ K +
Sbjct: 415 ---NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGE 471
Query: 360 AMSLLGEMVNKG-LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
AM L M G + + TWN ++ G+ + G A EL MQ +P+ +T IL
Sbjct: 472 AMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT---IL 528
Query: 419 DGLFKCHFYPEAVSLYRELE----KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
L C A + RE+ + NLD + + + D G ++ +R F G++
Sbjct: 529 SLLPACANLLGA-KMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMET 587
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN--LFVQGLLRRGDI 532
K D+ T+ ++ G G A L M+ +G PN T + + GL+ G++
Sbjct: 588 K----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM--GNV 641
Query: 533 SRSEK 537
+K
Sbjct: 642 DEGKK 646
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 165/356 (46%), Gaps = 16/356 (4%)
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC---SRGKVL---- 263
++A++ + ++ E L+ M G+ PD + + +G +C GKV+
Sbjct: 148 TWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVV 207
Query: 264 -KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
K G+ + ++I+ Y K G + A + M E +V +NS++ A+C +
Sbjct: 208 IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKH 263
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
++A+++ M +G P VT+N LI G+ ++ K D AM L+ +M G+T D+ TW A+
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM 323
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
+ G GM A ++ M G +P+ +T + + ++ KM
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
+ + + ++D G+L+DAR+ F ++ K DV+T+ M+ G C+ G A +
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYE 439
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
L M++ PN T+N + G ++ GD + Q M+ G T T LI
Sbjct: 440 LFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 154/353 (43%), Gaps = 15/353 (4%)
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTY-----NCLTRGLFHCSRGKVLKKGIM--P 269
D LC++G + EA + +G + TY +C+ G H R + G+ P
Sbjct: 54 DYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEP 113
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
DV + ++ Y K G IA A ++ M E N+FT++++I A+ +++ ++ K++
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
M+ G LP + ++ G ++ + ++ G++ + N+++ + K
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
G A + M++ D I + +L + + EAV L +E+EK + + +
Sbjct: 230 GELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
+I++ G G+ A + ++ G+ DVFT+T M+ GL G+ A + M
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 510 KGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
G PN T V I++ + + GF D L++ +S
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 176/413 (42%), Gaps = 56/413 (13%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A FF +M + I +VL+ KH A+ LVK M GI T+ I
Sbjct: 232 LDFATKFFRRMRERDV---IAWNSVLLAYCQNGKH-EEAVELVKEMEKEGISPGLVTWNI 287
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I +L + D ++ M G+ D+ T T +++GL G QAL + +M G
Sbjct: 288 LIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347
Query: 170 YRCNSYTHGAIINGLC--KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
N+ T + ++ KV N + + GF DV V +++D K G + +
Sbjct: 348 VVPNAVTIMSAVSACSCLKVINQGSEVHSI--AVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAI 277
A ++ + K DV T+N + G +C G ++ + P++ T++ +
Sbjct: 406 ARKVFDSVKNK----DVYTWNSMITG--YCQAGYCGKAYELFTRMQDANLRPNIITWNTM 459
Query: 278 VDNYCKEGMIARAERLMGFMARVG-VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
+ Y K G A L M + G V+ N T+N +I + + +A++++ M +
Sbjct: 460 ISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSR 519
Query: 337 CLPSTVTYNTL---------------IHGWCKIKKMDKAMSLLGEMVNK----------- 370
+P++VT +L IHG + +D ++ + +
Sbjct: 520 FMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSR 579
Query: 371 ----GL-TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
G+ T DI TWN+L+GG+ G A L + M+ G P+R T + I+
Sbjct: 580 TIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 169/366 (46%), Gaps = 30/366 (8%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM--RMDEMGYRCNSYTHGAIINGLCKV 187
M + G PD+++ T++N G + L + + + G R ++ T+ +++ +
Sbjct: 251 MRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRD 310
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
N A+ F+ +E + D+ Y A++ + GL EA L+ E+ KG PD VTY
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 248 NCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVF 307
N L + +E + + + M ++G +
Sbjct: 371 NSLLYA---------------------------FARERNTEKVKEVYQQMQKMGFGKDEM 403
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMI-YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
TYN++I+ + Q Q+ A+++Y M G P +TY LI K + +A +L+ E
Sbjct: 404 TYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSE 463
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M++ G+ P + T++AL+ G+ KAG A++ S M + G PD + Y+++LD L + +
Sbjct: 464 MLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNE 523
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+A LYR++ T+Y +M+ GL R D ++ ++ + ++
Sbjct: 524 TRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSV 583
Query: 487 MVQGLC 492
+V+G C
Sbjct: 584 LVKGEC 589
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 171/377 (45%), Gaps = 15/377 (3%)
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
N+ AI+ L + S A+ F + E V VY A+M + G ++A L
Sbjct: 190 NARMVAAILGVLGRWNQESLAVEIFTRAEP-TVGDRVQVYNAMMGVYSRSGKFSKAQELV 248
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCS----------RGKVLKKGIMPDVHTFSAIVDNYC 282
M +G PD++++N L V G+ PD T++ ++
Sbjct: 249 DAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACS 308
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
++ + A ++ M +P+++TYN++I+ + +A +++ + KG P V
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV 368
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
TYN+L++ + + + +K + +M G D T+N ++ + K G A +L M
Sbjct: 369 TYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDM 428
Query: 403 QK-HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
+ G+ PD ITY +++D L K + EA +L E+ + + + YS ++ G G+
Sbjct: 429 KGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGK 488
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNL 521
++A + FS + G K D Y++M+ L R A L DM G P+ Y L
Sbjct: 489 REEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYEL 548
Query: 522 FVQGLL---RRGDISRS 535
+ GL+ R DI ++
Sbjct: 549 MILGLMKENRSDDIQKT 565
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 121/553 (21%), Positives = 226/553 (40%), Gaps = 69/553 (12%)
Query: 67 PNIKEFTVLINLVVKMKHYTT--AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGF 124
P++ F LIN +K T A+ L+ + + G+ D+ T+ +++ R S D
Sbjct: 258 PDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAV 317
Query: 125 CVLGLMFKMGLEPDIVTLTTIVN--GLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIIN 182
V M +PD+ T +++ G C G +A L M ++ G+ ++ T+ +++
Sbjct: 318 KVFEDMEAHRCQPDLWTYNAMISVYGRC--GLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 183 GLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTG-KGIQ 241
+ NT +++++ GF D Y I+ K G ++ AL L+ +M G G
Sbjct: 376 AFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN 435
Query: 242 PDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
PD +TY L L +R ++L GI P + T+SA++ Y K G AE
Sbjct: 436 PDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDT 495
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
M R G +P+ Y+ +++ ++ + A +Y MI G PS Y +I G K
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMK 555
Query: 354 IKKMDKAMSLLGEM-------------------------------VNKGLTPDICTWNAL 382
+ D + +M + G + T ++
Sbjct: 556 ENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSI 615
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDR-ITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
+G + +G A EL+ +++H R IT A+I+ + + +L L++
Sbjct: 616 LGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIV-------LHCKVNNLSAALDEYF 668
Query: 442 LDRHI--------TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR 493
D + T+Y +L + +A + FS L+ G + MV C+
Sbjct: 669 ADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCK 728
Query: 494 EGLLDDAEQLLMDMEEKG----CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
G + A Q++ E KG C P Y ++ ++ ++E + ++ G +
Sbjct: 729 LGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTP 785
Query: 550 DATTTELLINFFS 562
D T L++ ++
Sbjct: 786 DLKTWNSLMSAYA 798
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/387 (19%), Positives = 175/387 (45%), Gaps = 8/387 (2%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+T +I K K + A S+V + G D T+ +++ + + + M
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ G P + ++ +++ LC +G +E+ + + +MG++ + + +++ + GN
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
+ ++ G+ + +Y +++ LCK V +A + SEM + ++ +N +
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSML 934
Query: 252 RGLFHCSRGK--------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
+ K + + G+ PD T++ ++ YC++ LM M +G++
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P + TY SLI+A Q ++ A ++++ ++ KG Y+T++ KA L
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
L M N G+ P + T + L+ + +G P A++++S ++ + Y+ ++D +
Sbjct: 1055 LQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLR 1114
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYS 450
Y + E++K L+ I++
Sbjct: 1115 SKDYNSGIERLLEMKKEGLEPDHRIWT 1141
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/492 (21%), Positives = 208/492 (42%), Gaps = 50/492 (10%)
Query: 121 DLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAI 180
DL L + G E + TL +I+ + G +A L + E A+
Sbjct: 591 DLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEAL 650
Query: 181 INGLCKVGNTSAAIG-YFKKVEGRGFKF-DVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
I CKV N SAA+ YF G+ F +Y ++ + EA ++S++
Sbjct: 651 IVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLS 710
Query: 239 GIQPDVVTYNCLTRGLFHCSRG------KVLKKGIMPDVH-----TFSAIVDNYCKEGMI 287
G + C + + +C G +V+ + H ++ I++ Y K+ +
Sbjct: 711 GCEASESV--CKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLW 768
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
+AE ++G + + G P++ T+NSL++A+ + A ++++M+ G P+ + N L
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
+H C ++++ ++ E+ + G + ++ F +AG K++ S+M+ G
Sbjct: 829 LHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
LP Y ++++ L K +A + E+E+ N + I++ ML + K +
Sbjct: 889 LPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQ 948
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCRE----------------GL--------------- 496
+ ++ GL+ D TY ++ CR+ GL
Sbjct: 949 VYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFG 1008
Query: 497 ----LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
L+ AEQL ++ KG + Y+ ++ G S++EK LQ+MK G
Sbjct: 1009 KQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLA 1068
Query: 553 TTELLINFFSGN 564
T LL+ +S +
Sbjct: 1069 TMHLLMVSYSSS 1080
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 113/586 (19%), Positives = 215/586 (36%), Gaps = 78/586 (13%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAA--INP-------------------------------- 65
LLS+ +D AV F M A P
Sbjct: 303 LLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKG 362
Query: 66 -FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGF 124
FP+ + L+ + ++ + ++M +G D T+ +I+ + + DL
Sbjct: 363 FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL 422
Query: 125 CVLGLMFKM-GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIING 183
+ M + G PD +T T +++ L +A L M ++G + T+ A+I G
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICG 482
Query: 184 LCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
K G A F + G K D Y+ ++D L + +A GL+ +M G P
Sbjct: 483 YAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPS 542
Query: 244 VVTYNCLTRGLFHCSRGKVLKK---------GIMP------------------------- 269
Y + GL +R ++K G+ P
Sbjct: 543 YTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQLKVAIT 602
Query: 270 -----DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQD 324
+ T +I+ +Y G + A L+ F+ +LI HC + +
Sbjct: 603 NGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKVNNLSA 662
Query: 325 AMKVY--DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
A+ Y D ++ C S+ Y TL+H + +A + ++ G ++
Sbjct: 663 ALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSM 722
Query: 383 VGGFCKAGMPLAAKELISTMQKHG-QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
V +CK G P A ++++ + G Y I++ K + +A S+ L +
Sbjct: 723 VVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSG 782
Query: 442 LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE 501
+ ++ ++ G + AR F+ + G V + I++ LC +G L++
Sbjct: 783 RTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELY 842
Query: 502 QLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
++ ++++ G + + L + R G+I +K MK G+
Sbjct: 843 VVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/410 (20%), Positives = 159/410 (38%), Gaps = 44/410 (10%)
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFD-VPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
CK+G A + E +GF F P+YT I+++ K L +A + + G PD
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD 786
Query: 244 VVTYNCLTRGLFHC---SRGK-----VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
+ T+N L C R + +++ G P V + + ++ C +G + ++
Sbjct: 787 LKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVE 846
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
+ +G + + + +++A + + K+Y SM G LP+ Y +I CK K
Sbjct: 847 ELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 356 KMDKAMSLLGEMVNK-----------------------------------GLTPDICTWN 380
++ A ++ EM GL PD T+N
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYN 966
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
L+ +C+ P L+ M+ G P TY ++ K +A L+ EL
Sbjct: 967 TLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSK 1026
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
L + Y M+ G A + ++ G++ + T +++ G +A
Sbjct: 1027 GLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEA 1086
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD 550
E++L ++++ Y+ + LR D + + L MK +G D
Sbjct: 1087 EKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 120/243 (49%)
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P +YN+++++ Q + VY+ M+ G P +TYN ++ ++ K D+ L
Sbjct: 220 PYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRL 279
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
L EMV G +PD+ T+N L+ PLAA L++ M++ G P I + ++DGL +
Sbjct: 280 LDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR 339
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
E K+ + Y++M+ G S G L+ A E F + KG +VFT
Sbjct: 340 AGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFT 399
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
Y M++G C G +A LL +ME +GC PN Y+ V L G + + + ++ M
Sbjct: 400 YNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMV 459
Query: 544 GKG 546
KG
Sbjct: 460 EKG 462
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 116/249 (46%), Gaps = 14/249 (5%)
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
YR +++ AI++ L V ++++ GF DV Y +M + + G +
Sbjct: 218 YRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLY 277
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK-----------VLKKGIMPDVHTFSAIV 278
L EM G PD+ TYN L L H + G + + G+ P V F+ ++
Sbjct: 278 RLLDEMVKDGFSPDLYTYNIL---LHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
D + G + + M +VG P+V Y +I + +++ A +++ M KG L
Sbjct: 335 DGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQL 394
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+ TYN++I G+C K +A +LL EM ++G P+ ++ LV AG L A E+
Sbjct: 395 PNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEV 454
Query: 399 ISTMQKHGQ 407
+ M + G
Sbjct: 455 VKDMVEKGH 463
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 109/216 (50%)
Query: 261 KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
++L+ G PDV T++ ++ + G R RL+ M + G P+++TYN L++ +
Sbjct: 247 QMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+ A+ + + M G P + + TLI G + K++ + E V G TPD+ +
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
++ G+ G A+E+ M + GQLP+ TY ++ G + EA +L +E+E
Sbjct: 367 VMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESR 426
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
+ + +YS +++ L + G++ +A E + KG
Sbjct: 427 GCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 122/271 (45%), Gaps = 6/271 (2%)
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL---PSTVTYNTLI 348
RL+ M + G T+N LI C + A V + I P +YN ++
Sbjct: 173 RLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAIL 229
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
H +K+ + +M+ G TPD+ T+N ++ + G L+ M K G
Sbjct: 230 HSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFS 289
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
PD TY I+L L + A++L + ++ ++ + ++ ++DGL G+L+ + F
Sbjct: 290 PDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYF 349
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLR 528
G DV YT+M+ G G L+ AE++ +M EKG PN TYN ++G
Sbjct: 350 MDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCM 409
Query: 529 RGDISRSEKYLQLMKGKGFSADATTTELLIN 559
G + L+ M+ +G + + L+N
Sbjct: 410 AGKFKEACALLKEMESRGCNPNFVVYSTLVN 440
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 132/315 (41%), Gaps = 8/315 (2%)
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN-----CLTRGLFHCSR 259
F+ Y +M + G L EM G T+N C GL
Sbjct: 148 FRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVV 207
Query: 260 GKVLKKGIM---PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH 316
+ +K P H+++AI+ + + + M G P+V TYN ++ A+
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFAN 267
Query: 317 CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
+ ++ D M+ G P TYN L+H K A++LL M G+ P +
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
+ L+ G +AG A K + K G PD + Y +++ G +A +++E
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKE 387
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
+ + ++ Y+ M+ G C G+ K+A ++++G + Y+ +V L G
Sbjct: 388 MTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGK 447
Query: 497 LDDAEQLLMDMEEKG 511
+ +A +++ DM EKG
Sbjct: 448 VLEAHEVVKDMVEKG 462
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 115/283 (40%), Gaps = 27/283 (9%)
Query: 54 VDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINC 113
V+ F K N P + +++ ++ +K Y + ++M G D T+ IV+
Sbjct: 207 VEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFA 266
Query: 114 LCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCN 173
RL +TD + +L M K G PD+ T +++ L AL L M E+G
Sbjct: 267 NFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPG 326
Query: 174 SYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWS 233
+I+GL + G A + + G DV YT ++ G + +A ++
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFK 386
Query: 234 EMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
EMT KG P+V TYN + RG +C G A L
Sbjct: 387 EMTEKGQLPNVFTYNSMIRG---------------------------FCMAGKFKEACAL 419
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
+ M G PN Y++L+N ++ +A +V M+ KG
Sbjct: 420 LKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 83/217 (38%), Gaps = 5/217 (2%)
Query: 359 KAM-SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
KAM L+ EM+ G CT+N L+ +AG+ E + P + +Y I
Sbjct: 169 KAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAI 228
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
L L Y +Y ++ + + Y+I++ G+ + G
Sbjct: 229 LHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGF 288
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
D++TY I++ L A LL M E G P + + GL R G + +
Sbjct: 289 SPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKY 348
Query: 538 YLQLMKGKGFSADATTTELLIN-FFSG---NKADNTF 570
++ G + D ++I + SG KA+ F
Sbjct: 349 FMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMF 385
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 160/339 (47%), Gaps = 13/339 (3%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ VD A+ FN M + PN+ F L++ + K K+ A + + M DS T+
Sbjct: 182 QKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTY 240
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
+I++ + V M G PDIVT + +V+ LC G V++ALG+ MD
Sbjct: 241 SILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDP 300
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
+ ++ + +++ A+ F ++E G K DV V+ +++ + CK +
Sbjct: 301 SICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKN 360
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK------VLKKGIM---PDVHTFSAIV 278
+ EM KG+ P+ + N + R L RG+ V +K I PD T++ ++
Sbjct: 361 VYRVLKEMKSKGVTPNSKSCNIILRHLIE--RGEKDEAFDVFRKMIKVCEPDADTYTMVI 418
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+C++ + A+++ +M + GV P++ T++ LIN C + Q A + + MI G
Sbjct: 419 KMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIR 478
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
PS VT+ L K ++ D + L E +N + +C
Sbjct: 479 PSGVTFGRLRQLLIKEERED-VLKFLNEKMNVLVNEPLC 516
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 162/337 (48%), Gaps = 14/337 (4%)
Query: 207 FDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV---- 262
+V + +M + V+EA+ ++ M + P++V +N L L C V
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSAL--CKSKNVRKAQ 223
Query: 263 -----LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC 317
++ PD T+S +++ + KE + +A + M G P++ TY+ +++ C
Sbjct: 224 EVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILC 283
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
++ +A+ + SM C P+T Y+ L+H + ++++A+ EM G+ D+
Sbjct: 284 KAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVA 343
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
+N+L+G FCKA ++ M+ G P+ + IIL L + EA ++R++
Sbjct: 344 VFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM 403
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLL 497
K+ + Y++++ C ++ A + + ++ KG+ + T+++++ GLC E
Sbjct: 404 IKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTT 462
Query: 498 DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLR--RGDI 532
A LL +M E G P+ T+ Q L++ R D+
Sbjct: 463 QKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDV 499
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 174/387 (44%), Gaps = 10/387 (2%)
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
+ + KV +S + ++ G + V +++ GL+ WSE +
Sbjct: 71 VAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSE-KQRH 129
Query: 240 IQPDVVTYNCLTRGLFHCSRGKVL-------KKGIMPDVHTFSAIVDNYCKEGMIARAER 292
+ V Y+ + + K++ +K M +V TF ++ Y + + A
Sbjct: 130 YEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIY 189
Query: 293 LMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWC 352
M + + PN+ +N L++A C ++ A +V+++M + P + TY+ L+ GW
Sbjct: 190 AFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFT-PDSKTYSILLEGWG 248
Query: 353 KIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRI 412
K + KA + EM++ G PDI T++ +V CKAG A ++ +M P
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 413 TYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGL 472
Y++++ + EAV + E+E+ + + +++ ++ C R+K+ +
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 473 QAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
++KG+ + + I+++ L G D+A + M K C P+ TY + ++ + ++
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEM 427
Query: 533 SRSEKYLQLMKGKGFSADATTTELLIN 559
++K + M+ KG T +LIN
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLIN 454
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 129/265 (48%), Gaps = 2/265 (0%)
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
NV T+ ++ + ++ +A+ ++ M P+ V +N L+ CK K + KA +
Sbjct: 167 NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVF 226
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
M ++ TPD T++ L+ G+ K A+E+ M G PD +TY+I++D L K
Sbjct: 227 ENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKA 285
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
EA+ + R ++ IYS+++ + RL++A + F ++ G+K DV +
Sbjct: 286 GRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVF 345
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKG 544
++ C+ + + ++L +M+ KG PN + N+ ++ L+ RG+ + + M
Sbjct: 346 NSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKM-I 404
Query: 545 KGFSADATTTELLINFFSGNKADNT 569
K DA T ++I F K T
Sbjct: 405 KVCEPDADTYTMVIKMFCEKKEMET 429
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 149/315 (47%), Gaps = 15/315 (4%)
Query: 48 KTVDAAVDFFNKMAA-INPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
+ +D A+ F+ M I+ PN+ + ++N VK A+ +RM + D T
Sbjct: 171 RKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCT 230
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
F I+IN CR S+ DL + M + G EP++V+ T++ G + G +E+ + +A M
Sbjct: 231 FNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMI 290
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGF---KFDVPVYTAIMDSLCKDG 223
E+G R + T +++GLC+ G A G + + +FD Y ++++ LC +
Sbjct: 291 ELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD---YGSLVEKLCGEN 347
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFS 275
A+ + E+ KG P + L GL R K++ GI+PD TF+
Sbjct: 348 KAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFN 407
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK 335
++ + C A RL + G EP+ TY+ L++ + + ++ + + M+ K
Sbjct: 408 LLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDK 467
Query: 336 GCLPSTVTYNTLIHG 350
LP TYN L+ G
Sbjct: 468 DMLPDIFTYNRLMDG 482
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 157/342 (45%), Gaps = 21/342 (6%)
Query: 210 PVYTAIMDSLCKDGLVNEALGLWSEMT----GKGIQPDVVTYNCLTRGL----------- 254
P++ + +D+ C+ ++ AL + M GK P+V YN + G
Sbjct: 158 PIFRSAIDAYCRARKMDYALLAFDTMKRLIDGK---PNVGVYNTVVNGYVKSGDMDKALR 214
Query: 255 FHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
F+ GK K PDV TF+ +++ YC+ A L M G EPNV ++N+LI
Sbjct: 215 FYQRMGKERAK---PDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIR 271
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP 374
++++ +K+ MI GC S T L+ G C+ ++D A L+ +++NK + P
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP 331
Query: 375 DICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLY 434
+ +LV C + A E++ + K GQ P I +++GL K +A
Sbjct: 332 SEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFM 391
Query: 435 RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
++ + ++++L LCS DA +KG + D TY ++V G +E
Sbjct: 392 EKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKE 451
Query: 495 GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
G + E L+ +M +K P+ TYN + GL G SR +
Sbjct: 452 GRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQ 493
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 135/294 (45%)
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P+V ++ +V+ Y K G + +A R M + +P+V T+N LIN +C + A+ +
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+ M KGC P+ V++NTLI G+ K+++ + + EM+ G T LV G C+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G A L+ + LP Y +++ L + A+ + EL K
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIA 370
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
+ +++GL GR + A F + G+ D T+ ++++ LC DA +L +
Sbjct: 371 CTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
KG P++ TY++ V G + G E + M K D T L++ S
Sbjct: 431 SKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLS 484
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 97/252 (38%), Gaps = 37/252 (14%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
D A+D F +M PN+ F LI + + + M LG T I+
Sbjct: 245 DLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEIL 304
Query: 111 INCLCRLSRTD--------------------LGFCVLGL---------------MFKMGL 135
++ LCR R D G V L ++K G
Sbjct: 305 VDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQ 364
Query: 136 EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG 195
P + TT+V GL G E+A G +M G +S T ++ LC +++ A
Sbjct: 365 TPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANR 424
Query: 196 YFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF 255
+G++ D Y ++ K+G E L +EM K + PD+ TYN L GL
Sbjct: 425 LRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGL- 483
Query: 256 HCSRGKVLKKGI 267
C+ GK +K +
Sbjct: 484 SCT-GKFSRKQV 494
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 114/506 (22%), Positives = 214/506 (42%), Gaps = 48/506 (9%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+ A + F +M P F +I++ SL+K M L D+ T+ I
Sbjct: 314 IKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNI 372
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I+ + + + M GL+PD V+ T++ VE+A GL MD+
Sbjct: 373 LISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDN 432
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE-- 227
+ YT A+ + + +FK+ G Y+A +D+ + G ++E
Sbjct: 433 VEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYGERGYLSEAE 491
Query: 228 --------------------------------ALGLWSEMTGKGIQPDVVTYNCLTRGLF 255
A L+ M G+ PD TYN L + L
Sbjct: 492 RVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA 551
Query: 256 --------HCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVF 307
C K+ + G + D + A++ ++ K G + AE + M +EP+V
Sbjct: 552 SADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVV 611
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
Y LINA +Q AM ++M G ++V YN+LI + K+ +D+A ++ ++
Sbjct: 612 VYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKL 671
Query: 368 V---NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
+ NK PD+ T N ++ + + M A+ + +M++ G+ + T+A++L K
Sbjct: 672 LQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGE-ANEFTFAMMLCMYKKN 730
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
+ EA + +++ +M + Y+ +L GR K+A E F + + G++ D T+
Sbjct: 731 GRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTF 790
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEK 510
+ L + G+ A + + ++ +K
Sbjct: 791 KSLGTILMKLGMSKKAVRKIEEIRKK 816
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 114/531 (21%), Positives = 216/531 (40%), Gaps = 73/531 (13%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADS------FT 106
A+ + KM+ I P+ +++ + K + + A K+ +ADS +T
Sbjct: 241 ALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYT 300
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
+ +I+ + + M + G+ P VT T+++ G + + L M
Sbjct: 301 YNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSL---MK 357
Query: 167 EMGYRC--NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
M C ++ T+ +I+ K + A YFK+++ G K D Y ++ + +
Sbjct: 358 TMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM 417
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTR---------------GLFHCSRGKVLKKGIMP 269
V EA GL +EM ++ D T + LTR FH + G + +G
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVA-GNMSSEG--- 473
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+SA +D Y + G ++ AER VF +N
Sbjct: 474 ----YSANIDAYGERGYLSEAER-------------VFICCQEVNKR------------- 503
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
+ + YN +I + K +KA L M++ G+TPD CT+N LV A
Sbjct: 504 ----------TVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASA 553
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
MP + + M++ G + D I Y ++ K A +Y+E+ + N++ + +Y
Sbjct: 554 DMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVY 613
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL---LMD 506
++++ G ++ A + ++ G+ + Y +++ + G LD+AE + L+
Sbjct: 614 GVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQ 673
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
K P+ T N + R + ++E MK +G + + T +L
Sbjct: 674 SCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMML 724
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 165/410 (40%), Gaps = 57/410 (13%)
Query: 193 AIGYFKKVEGRG-FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL- 250
A+ F+ + +G ++ +V Y ++ L K LW EM KGI+P TY L
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 251 ---TRGLFH----CSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
++G C GK+ K G+ PD T ++ Y K +AE F + +
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEE---FFKKWSCD 286
Query: 304 PN---------VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
N +TYN++I+ + Q+++A + + M+ +G +P+TVT+NT+IH +
Sbjct: 287 ENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNN 346
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
++ + SL+ M PD T+N L+ K A M+ G PD ++Y
Sbjct: 347 GQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY 405
Query: 415 AIILDGLFKCHFYPEAVSLYRELEKMNLD----------------------------RHI 446
+L H EA L E++ N++ H+
Sbjct: 406 RTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHV 465
Query: 447 TI------YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
YS +D G L +A F Q K V Y +M++ + A
Sbjct: 466 AGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKA 524
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD 550
+L M G P+ CTYN VQ L + YL+ M+ G+ +D
Sbjct: 525 CELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSD 574
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 113/558 (20%), Positives = 219/558 (39%), Gaps = 75/558 (13%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG-IEADSF 105
L+ +D+ D + ++ + KE T+++ + H+ A+ + + S G E +
Sbjct: 132 LEALDSIEDVEDALSPWAERLSNKERTIILKEQI---HWERAVEIFEWFKSKGCYELNVI 188
Query: 106 TFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
+ I++ L + + + M + G++P T T+++ G AL +M
Sbjct: 189 HYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKM 248
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV------YTAIMDSL 219
++G + + T G ++ K A +FKK K D V Y ++D+
Sbjct: 249 SKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTY 308
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVD 279
K G + EA + M L++GI+P TF+ ++
Sbjct: 309 GKSGQIKEASETFKRM---------------------------LEEGIVPTTVTFNTMIH 341
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
Y G + LM M ++ P+ TYN LI+ H + ++ A + M G P
Sbjct: 342 IYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKP 400
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
V+Y TL++ + +++A L+ EM + + D T +AL + +A M +
Sbjct: 401 DPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWF 460
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY 459
G + Y+ +D + + EA ++ +++N R + Y++M+
Sbjct: 461 KRFHVAGNMSSE-GYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGIS 518
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQ----------GLC-----RE---------- 494
+ A E F + + G+ D TY +VQ G C RE
Sbjct: 519 KSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPY 578
Query: 495 ----------GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKG 544
G L+ AE++ +M E P+ Y + + G++ ++ Y++ MK
Sbjct: 579 CAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKE 638
Query: 545 KGFSADATTTELLINFFS 562
G ++ LI ++
Sbjct: 639 AGIPGNSVIYNSLIKLYT 656
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 140/333 (42%), Gaps = 12/333 (3%)
Query: 139 IVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
++ ++ + E+A L M G + T+ ++ L Y +
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLE 564
Query: 199 KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC- 257
K+ G+ D Y A++ S K G +N A ++ EM I+PDVV Y L
Sbjct: 565 KMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTG 624
Query: 258 ------SRGKVLKKGIMP-DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE---PNVF 307
S + +K+ +P + +++++ Y K G + AE + + + + P+V+
Sbjct: 625 NVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVY 684
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
T N +IN + + ++ A ++DSM +G + T+ ++ + K + ++A + +M
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
+ D ++N+++G F G A E M G PD T+ + L K
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMS 803
Query: 428 PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
+AV E+ K + R + ++ L L G
Sbjct: 804 KKAVRKIEEIRKKEIKRGLELWISTLSSLVGIG 836
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 101/254 (39%), Gaps = 16/254 (6%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
++SS L ++ A + + +M N P++ + VLIN + A+S V+ M G
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFK---MGLEPDIVTLTTIVNGLCAEGNVE 156
I +S + +I ++ D + + + PD+ T ++N V
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVR 700
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+A + M + G N +T ++ K G A K++ D Y +++
Sbjct: 701 KAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCS------------RGKVLK 264
DG EA+ + EM GIQPD T+ L L R K +K
Sbjct: 760 GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
Query: 265 KGIMPDVHTFSAIV 278
+G+ + T S++V
Sbjct: 820 RGLELWISTLSSLV 833
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 178/402 (44%), Gaps = 11/402 (2%)
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
+ G+ +S T+ ++++ L K + +++ +G + +T M +
Sbjct: 187 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 245
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV-------LKKGIMPDVHTFSAIV 278
+A+G++ M + V T NCL L GK LK+ P++ T++ ++
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+ +C+ + A R+ M G++P++ +N ++ + DA+K++ M KG
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+ +Y +I +CK M+ A+ +MV+ GL PD + L+ GF EL
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+ MQ+ G PD TY ++ + A +Y ++ + ++ I +++++
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFM 485
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
+ R + + KG+ D +YT++++GL EG +A + L +M +KG
Sbjct: 486 ARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLID 545
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
YN F R G + E + +L + FS E+ +
Sbjct: 546 YNKFAADFHRGG---QPEIFEELAQRAKFSGKFAAAEIFARW 584
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 157/355 (44%), Gaps = 23/355 (6%)
Query: 69 IKEFTVLINLVVKMKHYTTAISLVKRMHS----LGIEADSFTFTIVINCLC-RLSRTDLG 123
++ FT+ + K A+ + + M +G+E INCL L R LG
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVE--------TINCLLDSLGRAKLG 280
Query: 124 --FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAII 181
VL K P+++T T ++NG C N+ +A + M + G + + H ++
Sbjct: 281 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVML 340
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
GL + S AI F ++ +G +V YT ++ CK + A+ + +M G+Q
Sbjct: 341 EGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 242 PDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
PD Y CL G + ++ +KG PD T++A++ + M A R+
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
M + +EP++ T+N ++ ++ + + V++ MI KG P +Y LI G
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 354 IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
K +A L EM++KG+ + +N F + G P +EL + G+
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKF 575
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 200 VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR 259
E +GF D Y ++M L K + + EM KG+ +T T + +
Sbjct: 186 AERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL----LTMETFTIAMKAFAA 241
Query: 260 GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQ 319
K KK + G+ E + + ++GVE T N L+++
Sbjct: 242 AKERKKAV-----------------GIF---ELMKKYKFKIGVE----TINCLLDSLGRA 277
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
++A ++D + + P+ +TY L++GWC+++ + +A + +M+++GL PDI
Sbjct: 278 KLGKEAQVLFDKLKER-FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAH 336
Query: 380 NALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
N ++ G ++ A +L M+ G P+
Sbjct: 337 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPN----------------------------- 367
Query: 440 MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDD 499
+ Y+IM+ C ++ A E+F + GL+ D YT ++ G + LD
Sbjct: 368 ------VRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Query: 500 AEQLLMDMEEKGCPPNDCTYNLFVQ 524
+LL +M+EKG PP+ TYN ++
Sbjct: 422 VYELLKEMQEKGHPPDGKTYNALIK 446
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 2/267 (0%)
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
R G + TYNS+++ Q + + V + M KG L + T+ + + K+
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
KA+ + M + T N L+ +A + A+ L + K P+ +TY ++L
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLL 305
Query: 419 DGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLK 478
+G + EA ++ ++ L I +++ML+GL + DA + F +++KG
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC 365
Query: 479 IDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKY 538
+V +YTIM++ C++ ++ A + DM + G P+ Y + G + + +
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 539 LQLMKGKGFSADATTTELLINFFSGNK 565
L+ M+ KG D T LI + K
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQK 452
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 2/235 (0%)
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
+G + TYN+++ K ++ + +S+L EM KGL + T+ + F A
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A + M+K+ T +LD L + EA L+ +L K ++ Y+++L+
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLN 306
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
G C L +A ++ + +GLK D+ + +M++GL R DA +L M+ KG P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCP 366
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNT 569
N +Y + ++ ++ + + +Y M G DA LI F K +T
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 87/205 (42%), Gaps = 1/205 (0%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
+R K DA + F+ M + P PN++ +T++I K TAI M G++ D
Sbjct: 344 LRSRKKSDA-IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
+ +T +I + D + +L M + G PD T ++ + + E A +
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYN 462
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
+M + + +T I+ N ++++ +G D YT ++ L +G
Sbjct: 463 KMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEG 522
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYN 248
EA EM KG++ ++ YN
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYN 547
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 142/332 (42%), Gaps = 25/332 (7%)
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
++ +P+I +++ LC G V++ L RM + ++ T + G C+V +
Sbjct: 227 RVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPK 285
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A+ +++ G K + Y A +D+ C+ G+V+EA L+ M KG
Sbjct: 286 KAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSA------- 338
Query: 252 RGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
P TF+ ++ K L+G M G P+V TY
Sbjct: 339 -----------------PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKD 381
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
+I C+ +++ +A K D M KG P VTYN + C+ +K D+A+ L G MV
Sbjct: 382 VIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESR 441
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV 431
P + T+N L+ F + P A + M K + D TY +++GLF CH EA
Sbjct: 442 CAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEAC 501
Query: 432 SLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
L E+ L ++ L L G LK
Sbjct: 502 FLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLK 533
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 12/283 (4%)
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK------ 261
++ + ++D+LCK GLV E L M + ++PD T+N L G K
Sbjct: 233 EINAFNMLLDALCKCGLVKEGEALLRRMRHR-VKPDANTFNVLFFGWCRVRDPKKAMKLL 291
Query: 262 --VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE---PNVFTYNSLINAH 316
+++ G P+ T+ A +D +C+ GM+ A L FM G P T+ +I A
Sbjct: 292 EEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVAL 351
Query: 317 CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
D+ ++ ++ MI GCLP TY +I G C +K+D+A L EM NKG PDI
Sbjct: 352 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
T+N + C+ A +L M + P TY +++ F+ A + + E
Sbjct: 412 VTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTE 471
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI 479
++K + + + Y M++GL R K+A + KGLK+
Sbjct: 472 MDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKL 514
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 34/295 (11%)
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
I+ YC+ + + RV +P + +N L++A C +++ + M ++
Sbjct: 205 ILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHR- 263
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
P T+N L GWC+++ KAM LL EM+ G P+ T+ A + FC+AGM A
Sbjct: 264 VKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
+L M G T +++M+ L
Sbjct: 324 DLFDFMITKGSAVSAPT--------------------------------AKTFALMIVAL 351
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
+ ++ E + + G DV TY +++G+C +D+A + L +M KG PP+
Sbjct: 352 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDI 411
Query: 517 CTYNLFVQGLLRRGDISRSEK-YLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
TYN F++ L + K Y ++++ + + T L+ FF + D F
Sbjct: 412 VTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAF 466
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 5/196 (2%)
Query: 50 VDAAVDFFNKM----AAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSF 105
VD A D F+ M +A++ P K F ++I + K L+ RM S G D
Sbjct: 319 VDEAADLFDFMITKGSAVSA-PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVS 377
Query: 106 TFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
T+ VI +C + D + L M G PDIVT + LC ++AL L RM
Sbjct: 378 TYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
E + T+ +I+ ++ + A + +++ R DV Y A+++ L
Sbjct: 438 VESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRA 497
Query: 226 NEALGLWSEMTGKGIQ 241
EA L E+ KG++
Sbjct: 498 KEACFLLEEVVNKGLK 513
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 121/241 (50%), Gaps = 12/241 (4%)
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
G A FK G + Y +M + C + ++ A L+ +M + + PDV +Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 248 NCLTRGLFHCSRGKV----------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
L +G C +G+V L KG +PD +++ ++++ C++ + A +L+ M
Sbjct: 229 KILIQGF--CRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRM 286
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
G P++ YN++I C +D+ DA KV D M+ GC P++V+Y TLI G C
Sbjct: 287 KLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
D+ L EM++KG +P N LV GFC G A +++ + K+G+ T+ ++
Sbjct: 347 DEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMV 406
Query: 418 L 418
+
Sbjct: 407 I 407
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 131/244 (53%), Gaps = 3/244 (1%)
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
G+MP+ +++ ++ +C ++ A +L G M V P+V +Y LI C + Q+ A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
M++ D M+ KG +P ++Y TL++ C+ ++ +A LL M KG PD+ +N ++ G
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
FC+ + A++++ M +G P+ ++Y ++ GL + E E+ H
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
++ + ++ G CS+G++++A + + G + T+ +++ +C E D++E++ +
Sbjct: 365 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE---DESEKIKL 421
Query: 506 DMEE 509
+E+
Sbjct: 422 FLED 425
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 35/240 (14%)
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
+Q A +++ S G +P+T +YN L+ +C + A L G+M+ + + PD+ ++
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
L+ GFC+ G A EL+ M G +PDR++Y
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSY--------------------------- 263
Query: 442 LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE 501
+ +L+ LC +L++A + ++ KG D+ Y M+ G CRE DA
Sbjct: 264 --------TTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDAR 315
Query: 502 QLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
++L DM GC PN +Y + GL +G +KYL+ M KGFS + + L+ F
Sbjct: 316 KVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGF 375
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/346 (18%), Positives = 138/346 (39%), Gaps = 28/346 (8%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHY-TTAISLVKRMHSL 98
L+ + K + + F KM N P K +++++V + Y A L K
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
G+ ++ ++ +++ C + + + G M + + PD+ + ++ G C +G V A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
+ L M G+ + ++ ++N LC+ A +++ +G D+ Y ++
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIV 278
C++ +A + +M G P+ V+Y L GL
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL------------------------ 340
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
C +GM ++ + M G P+ N L+ C ++++A V + ++ G
Sbjct: 341 ---CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGET 397
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
+ T+ +I C + +K L + V + +T D + +G
Sbjct: 398 LHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGDTRIVDVGIG 443
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 3/180 (1%)
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY-PEA 430
LT +I T+ L+ + +A +P M + P ILD L Y +A
Sbjct: 117 LTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 431 VSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQG 490
L++ + + Y++++ C L A + F + + + DV +Y I++QG
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 491 LCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD 550
CR+G ++ A +LL DM KG P+ +Y + L R+ + + K L MK KG + D
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPD 294
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 4/135 (2%)
Query: 428 PEAV--SLYRELEKMNLDRHITIYSIMLDGLCSY-GRLKDAREFFSGLQAKGLKIDVFTY 484
PE V + Y+ LE N + +LD L S+ G L+ A E F + G+ + +Y
Sbjct: 135 PEKVLSTFYKMLE-FNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSY 193
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKG 544
+++Q C L A QL M E+ P+ +Y + +QG R+G ++ + + L M
Sbjct: 194 NLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN 253
Query: 545 KGFSADATTTELLIN 559
KGF D + L+N
Sbjct: 254 KGFVPDRLSYTTLLN 268
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 23/355 (6%)
Query: 69 IKEFTVLINLVVKMKHYTTAISLVKRMHS----LGIEADSFTFTIVINCLC-RLSRTDLG 123
++ FT+ + K A+ + + M +G+E INCL L R LG
Sbjct: 228 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVE--------TINCLLDSLGRAKLG 279
Query: 124 --FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAII 181
VL K P+++T T ++NG C N+ +A + M + G + + H ++
Sbjct: 280 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 339
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
GL + S AI F ++ +G +V YT ++ CK + A+ + +M G+Q
Sbjct: 340 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 399
Query: 242 PDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
PD Y CL G + ++ +KG PD T++A++ + M R+
Sbjct: 400 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
M + +EP++ T+N ++ ++ + + V+D MI KG P +Y LI G
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 519
Query: 354 IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
K +A L EM++KG+ + +N F + G P +EL + G+
Sbjct: 520 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKF 574
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 177/402 (44%), Gaps = 11/402 (2%)
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
+ G+ +S T+ ++++ L K + +++ +G + +T M +
Sbjct: 186 ERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 244
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV-------LKKGIMPDVHTFSAIV 278
+A+G++ M + V T NCL L GK LK+ P++ T++ ++
Sbjct: 245 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 304
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+ +C+ + A R+ M G++P++ +N ++ + DA+K++ M KG
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+ +Y +I +CK M+ A+ +MV+ GL PD + L+ GF EL
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+ MQ+ G PD TY ++ + +Y ++ + ++ I +++++
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 484
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
+ R + + KG+ D +YT++++GL EG +A + L +M +KG
Sbjct: 485 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 544
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
YN F R G + E + +L + FS E+ +
Sbjct: 545 YNKFAADFHRGG---QPEIFEELAQRAKFSGKFAAAEIFARW 583
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 121/267 (45%), Gaps = 2/267 (0%)
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
R G + TYNS+++ Q + + V + M KG L + T+ + + K+
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 245
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
KA+ + M + T N L+ +A + A+ L + K P+ +TY ++L
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLL 304
Query: 419 DGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLK 478
+G + EA ++ ++ L I +++ML+GL + DA + F +++KG
Sbjct: 305 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 364
Query: 479 IDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKY 538
+V +YTIM++ C++ ++ A + DM + G P+ Y + G + + +
Sbjct: 365 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 424
Query: 539 LQLMKGKGFSADATTTELLINFFSGNK 565
L+ M+ KG D T LI + K
Sbjct: 425 LKEMQEKGHPPDGKTYNALIKLMANQK 451
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 2/235 (0%)
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
+G + TYN+++ K ++ + +S+L EM KGL + T+ + F A
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 246
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A + M+K+ T +LD L + EA L+ +L K ++ Y+++L+
Sbjct: 247 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLN 305
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
G C L +A ++ + GLK D+ + +M++GL R DA +L M+ KG P
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 365
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNT 569
N +Y + ++ ++ + + +Y M G DA LI F K +T
Sbjct: 366 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 420
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 1/205 (0%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
+R +K DA + F+ M + P PN++ +T++I K TAI M G++ D
Sbjct: 343 LRSMKKSDA-IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
+ +T +I + D + +L M + G PD T ++ + + E +
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 461
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
+M + + +T I+ N + ++ +G D YT ++ L +G
Sbjct: 462 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 521
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYN 248
EA EM KG++ ++ YN
Sbjct: 522 KSREACRYLEEMLDKGMKTPLIDYN 546
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 156/355 (43%), Gaps = 23/355 (6%)
Query: 69 IKEFTVLINLVVKMKHYTTAISLVKRMHS----LGIEADSFTFTIVINCLC-RLSRTDLG 123
++ FT+ + K A+ + + M +G+E INCL L R LG
Sbjct: 229 METFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVE--------TINCLLDSLGRAKLG 280
Query: 124 --FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAII 181
VL K P+++T T ++NG C N+ +A + M + G + + H ++
Sbjct: 281 KEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVML 340
Query: 182 NGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
GL + S AI F ++ +G +V YT ++ CK + A+ + +M G+Q
Sbjct: 341 EGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQ 400
Query: 242 PDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
PD Y CL G + ++ +KG PD T++A++ + M R+
Sbjct: 401 PDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
M + +EP++ T+N ++ ++ + + V+D MI KG P +Y LI G
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Query: 354 IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
K +A L EM++KG+ + +N F + G P +EL + G+
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKF 575
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 176/402 (43%), Gaps = 11/402 (2%)
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
+ G+ S T+ ++++ L K + +++ +G + +T M +
Sbjct: 187 ERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKER 245
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV-------LKKGIMPDVHTFSAIV 278
+A+G++ M + V T NCL L GK LK+ P++ T++ ++
Sbjct: 246 KKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLL 305
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+ +C+ + A R+ M G++P++ +N ++ + DA+K++ M KG
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+ +Y +I +CK M+ A+ +MV+ GL PD + L+ GF EL
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
+ MQ+ G PD TY ++ + +Y ++ + ++ I +++++
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFV 485
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
+ R + + KG+ D +YT++++GL EG +A + L +M +KG
Sbjct: 486 ARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLID 545
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
YN F R G + E + +L + FS E+ +
Sbjct: 546 YNKFAADFHRGG---QPEIFEELAQRAKFSGKFAAAEIFARW 584
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 120/267 (44%), Gaps = 2/267 (0%)
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
R G TYNS+++ Q + + V + M KG L + T+ + + K+
Sbjct: 188 RQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLL-TMETFTIAMKAFAAAKERK 246
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
KA+ + M + T N L+ +A + A+ L + K P+ +TY ++L
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLL 305
Query: 419 DGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLK 478
+G + EA ++ ++ L I +++ML+GL + DA + F +++KG
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 479 IDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKY 538
+V +YTIM++ C++ ++ A + DM + G P+ Y + G + + +
Sbjct: 366 PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYEL 425
Query: 539 LQLMKGKGFSADATTTELLINFFSGNK 565
L+ M+ KG D T LI + K
Sbjct: 426 LKEMQEKGHPPDGKTYNALIKLMANQK 452
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 108/235 (45%), Gaps = 2/235 (0%)
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
+G ++ TYN+++ K ++ + +S+L EM KGL + T+ + F A
Sbjct: 189 QGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKK 247
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A + M+K+ T +LD L + EA L+ +L K ++ Y+++L+
Sbjct: 248 AVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMTYTVLLN 306
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
G C L +A ++ + GLK D+ + +M++GL R DA +L M+ KG P
Sbjct: 307 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCP 366
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNT 569
N +Y + ++ ++ + + +Y M G DA LI F K +T
Sbjct: 367 NVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDT 421
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 86/205 (41%), Gaps = 1/205 (0%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
+R +K DA + F+ M + P PN++ +T++I K TAI M G++ D
Sbjct: 344 LRSMKKSDA-IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
+ +T +I + D + +L M + G PD T ++ + + E +
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYN 462
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
+M + + +T I+ N + ++ +G D YT ++ L +G
Sbjct: 463 KMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 522
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYN 248
EA EM KG++ ++ YN
Sbjct: 523 KSREACRYLEEMLDKGMKTPLIDYN 547
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 155/374 (41%), Gaps = 47/374 (12%)
Query: 239 GIQPDVVTYNCLTRGL---FHCSRG-----KVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
QPDV+ +N L F ++L+ +P T++ ++ YC G+I RA
Sbjct: 172 SFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERA 231
Query: 291 ERLM-----------------------GFMARVG----------------VEPNVFTYNS 311
E ++ G M R G +P TYN
Sbjct: 232 EVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNL 291
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
+IN + + + K+Y M C P+ TY L++ + + +KA + ++ G
Sbjct: 292 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV 431
L PD+ +NAL+ + +AG P A E+ S MQ G PDR +Y I++D + + +A
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Query: 432 SLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGL 491
+++ E++++ + + + ++L + + G++ D F M+
Sbjct: 412 AVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLY 471
Query: 492 CREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADA 551
R G E++L +ME C + TYN+ + + G + R E+ +K K F D
Sbjct: 472 GRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDV 531
Query: 552 TTTELLINFFSGNK 565
T I +S K
Sbjct: 532 VTWTSRIGAYSRKK 545
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/448 (20%), Positives = 192/448 (42%), Gaps = 13/448 (2%)
Query: 129 LMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVG 188
++ K +PD++ +++ + ++A L +++ E Y T+ +I C G
Sbjct: 167 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 226
Query: 189 NTSAAIGYFKKVEGRGFK---FDVPVYTAIMDSLCK-DGLVNEALGLWSEMTGKGIQPDV 244
A +++ V VY A ++ L K G EA+ ++ M +P
Sbjct: 227 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286
Query: 245 VTYNCLTRGLFHCSRGKVLKK--------GIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
TYN + S+ + K P++ T++A+V+ + +EG+ +AE +
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
+ G+EP+V+ YN+L+ ++ A +++ M + GC P +YN ++ + +
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
A ++ EM G+ P + + L+ + KA + ++ M ++G PD
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 466
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
+L+ + + + + E+E I+ Y+I+++ G L+ E F L+ K
Sbjct: 467 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 526
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
+ DV T+T + R+ L ++ +M + GC P+ T + + + +
Sbjct: 527 FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVT 586
Query: 537 KYLQLMKGKGFSADATTTELLINFFSGN 564
L+ M KG + + +L+ + N
Sbjct: 587 SVLRTMH-KGVTVSSLVPKLMAKSLTVN 613
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 148/352 (42%), Gaps = 27/352 (7%)
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
AI + +RM + + T+ ++IN + S++ + + + M +P+I T T +VN
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 148 GLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF 207
EG E+A + ++ E G + Y + A++ + G A F ++ G +
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGI 267
D Y ++D+ + GL ++A ++ EM + GI
Sbjct: 390 DRASYNIMVDAYGRAGLHSDAEAVFEEMK---------------------------RLGI 422
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
P + + ++ Y K + + E ++ M+ GVEP+ F NS++N + Q K
Sbjct: 423 APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK 482
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+ M C TYN LI+ + K +++ L E+ K PD+ TW + +G +
Sbjct: 483 ILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYS 542
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
+ + + E+ M G PD T ++L + S+ R + K
Sbjct: 543 RKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 142/338 (42%), Gaps = 9/338 (2%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
M+ + A+D F +M P + + ++INL K + L M S + +
Sbjct: 261 MKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN 320
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
T+T ++N R + + + + GLEPD+ ++ G A +
Sbjct: 321 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 380
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
M MG + ++ +++ + G S A F++++ G + + ++ + K
Sbjct: 381 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 440
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGI--------MPDVHTFS 275
V + + EM+ G++PD N + + ++K + D+ T++
Sbjct: 441 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYN 500
Query: 276 AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK 335
+++ Y K G + R E L + P+V T+ S I A+ + ++V++ MI
Sbjct: 501 ILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDS 560
Query: 336 GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT 373
GC P T L+ +++++ S+L M +KG+T
Sbjct: 561 GCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVT 597
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 155/372 (41%), Gaps = 47/372 (12%)
Query: 241 QPDVVTYNCLTRGL---FHCSRG-----KVLKKGIMPDVHTFSAIVDNYCKEGMIARAER 292
QPDV+ +N L F ++L+ +P T++ ++ YC G+I RAE
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 293 LM-----------------------GFMARVG----------------VEPNVFTYNSLI 313
++ G M R G +P TYN +I
Sbjct: 212 VLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMI 271
Query: 314 NAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT 373
N + + + K+Y M C P+ TY L++ + + +KA + ++ GL
Sbjct: 272 NLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE 331
Query: 374 PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSL 433
PD+ +NAL+ + +AG P A E+ S MQ G PDR +Y I++D + + +A ++
Sbjct: 332 PDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAV 391
Query: 434 YRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR 493
+ E++++ + + + ++L + + G++ D F M+ R
Sbjct: 392 FEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGR 451
Query: 494 EGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
G E++L +ME C + TYN+ + + G + R E+ +K K F D T
Sbjct: 452 LGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVT 511
Query: 554 TELLINFFSGNK 565
I +S K
Sbjct: 512 WTSRIGAYSRKK 523
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 192/448 (42%), Gaps = 13/448 (2%)
Query: 129 LMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVG 188
++ K +PD++ +++ + ++A L +++ E Y T+ +I C G
Sbjct: 145 ILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAG 204
Query: 189 NTSAAIGYFKKVEGRGFK---FDVPVYTAIMDSLCK-DGLVNEALGLWSEMTGKGIQPDV 244
A +++ V VY A ++ L K G EA+ ++ M +P
Sbjct: 205 LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264
Query: 245 VTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
TYN + S+ ++ P++ T++A+V+ + +EG+ +AE +
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
+ G+EP+V+ YN+L+ ++ A +++ M + GC P +YN ++ + +
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
A ++ EM G+ P + + L+ + KA + ++ M ++G PD
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNS 444
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
+L+ + + + + E+E I+ Y+I+++ G L+ E F L+ K
Sbjct: 445 MLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN 504
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
+ DV T+T + R+ L ++ +M + GC P+ T + + + +
Sbjct: 505 FRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVT 564
Query: 537 KYLQLMKGKGFSADATTTELLINFFSGN 564
L+ M KG + + +L+ + N
Sbjct: 565 SVLRTMH-KGVTVSSLVPKLMAKSLTVN 591
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 148/352 (42%), Gaps = 27/352 (7%)
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
AI + +RM + + T+ ++IN + S++ + + + M +P+I T T +VN
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 148 GLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF 207
EG E+A + ++ E G + Y + A++ + G A F ++ G +
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGI 267
D Y ++D+ + GL ++A ++ EM + GI
Sbjct: 368 DRASYNIMVDAYGRAGLHSDAEAVFEEMK---------------------------RLGI 400
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
P + + ++ Y K + + E ++ M+ GVEP+ F NS++N + Q K
Sbjct: 401 APTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEK 460
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+ M C TYN LI+ + K +++ L E+ K PD+ TW + +G +
Sbjct: 461 ILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYS 520
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
+ + + E+ M G PD T ++L + S+ R + K
Sbjct: 521 RKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 143/339 (42%), Gaps = 11/339 (3%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
M+ + A+D F +M P + + ++INL K + L M S + +
Sbjct: 239 MKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPN 298
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
T+T ++N R + + + + GLEPD+ ++ G A +
Sbjct: 299 ICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFS 358
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
M MG + ++ +++ + G S A F++++ G + + ++ + K
Sbjct: 359 LMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKAR 418
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTR-----GLFHCSRGKVLKK----GIMPDVHTF 274
V + + EM+ G++PD N + G F K+L + D+ T+
Sbjct: 419 DVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQF-TKMEKILAEMENGPCTADISTY 477
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+ +++ Y K G + R E L + P+V T+ S I A+ + ++V++ MI
Sbjct: 478 NILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMID 537
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT 373
GC P T L+ +++++ S+L M +KG+T
Sbjct: 538 SGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGVT 575
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 149/338 (44%), Gaps = 6/338 (1%)
Query: 204 GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC---SRG 260
GFK + + + L ++GLV EA+ +++ + GI VVT N + G R
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 261 KVLKKGIMP---DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC 317
L K ++ D ++ C G ++ L+ + G++P + Y LI+ C
Sbjct: 200 WELHKEMVESEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC 259
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
+V +MI PS Y +I G C KK +A + + +KG PD
Sbjct: 260 EIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRV 319
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
+ ++ GFC+ G +A++L M K G P+ Y +++ G FK + Y E+
Sbjct: 320 VYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEM 379
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLL 497
+ + + M+ G CS+G+ +A E F + G+ + TY +++G C+E +
Sbjct: 380 LRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKV 439
Query: 498 DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRS 535
+ +L +++ G P+ Y V+ L ++ S
Sbjct: 440 EKGLKLYKELKALGLKPSGMAYAALVRNLKMSDSVATS 477
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 162/383 (42%), Gaps = 34/383 (8%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L ++ D K V AA F + P P + E + + + AI + + +G
Sbjct: 119 LFGALLDGKAVKAAKSFLD-TTGFKPEPTLLE--QYVKCLSEEGLVEEAIEVYNVLKDMG 175
Query: 100 IEADSFTF-TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
I + T ++++ CL + + D + + M + E D + ++ LC G+V +
Sbjct: 176 ISSSVVTCNSVLLGCL-KARKLDRFWELHKEMVES--EFDSERIRCLIRALCDGGDVSEG 232
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L + + G Y + +I+G C++GN + + + +Y I+
Sbjct: 233 YELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKG 292
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIV 278
LC + EA ++ + KG PD V Y + RG
Sbjct: 293 LCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRG------------------------- 327
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+C++G + A +L M + G+ PN F YN +I+ H + ++ Y+ M+ G
Sbjct: 328 --FCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYG 385
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
+ ++ NT+I G+C K D+A + M G+TP+ T+NAL+ GFCK +L
Sbjct: 386 GTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKL 445
Query: 399 ISTMQKHGQLPDRITYAIILDGL 421
++ G P + YA ++ L
Sbjct: 446 YKELKALGLKPSGMAYAALVRNL 468
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 141/334 (42%), Gaps = 16/334 (4%)
Query: 134 GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
G +P+ L V L EG VE+A+ + + +MG + T +++ G K
Sbjct: 140 GFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRF 199
Query: 194 IGYFKK-VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
K+ VE +FD ++ +LC G V+E L + +G+ P Y L
Sbjct: 200 WELHKEMVES---EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLIS 256
Query: 253 GLFHCSRG------KVLKKGI----MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV 302
G C G +VL I P ++ + I+ C A + + G
Sbjct: 257 GF--CEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGY 314
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
P+ Y ++I C + + A K++ MI KG P+ YN +IHG K ++ +
Sbjct: 315 APDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEA 374
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
EM+ G + + N ++ GFC G A E+ M + G P+ ITY ++ G
Sbjct: 375 FYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFC 434
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
K + + + LY+EL+ + L Y+ ++ L
Sbjct: 435 KENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 135/358 (37%), Gaps = 44/358 (12%)
Query: 242 PDVVTYNCLTRGLFHCSRGKVLKK-----GIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
P V+ N L L K K G P+ V +EG++ A +
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNV 170
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAM-KVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
+ +G+ +V T NS++ CL+ + D +++ M+ + LI C
Sbjct: 171 LKDMGISSSVVTCNSVL-LGCLKARKLDRFWELHKEMVESEFDSERI--RCLIRALCDGG 227
Query: 356 KMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYA 415
+ + LL + + +GL P + L+ GFC+ G E++ TM P Y
Sbjct: 228 DVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQ 287
Query: 416 IILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK 475
I+ GL EA +++ L+ +Y+ M+ G C G L AR+ + + K
Sbjct: 288 KIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKK 347
Query: 476 GLKIDVFTYTI-----------------------------------MVQGLCREGLLDDA 500
G++ + F Y + M++G C G D+A
Sbjct: 348 GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEA 407
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
++ +M E G PN TYN ++G + + + K + +K G L+
Sbjct: 408 FEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/262 (19%), Positives = 107/262 (40%), Gaps = 27/262 (10%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P + LI+ ++ +Y ++ M + + + +I LC + +C+
Sbjct: 246 PGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCI 305
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
+ G PD V TT++ G C +G + A L M + G R N + + +I+G K
Sbjct: 306 FKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFK 365
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G S ++ ++ G+ + ++ C G +EA ++ M+ G+ P+ +T
Sbjct: 366 RGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAIT 425
Query: 247 YNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV 306
YN L +G +CKE + + +L + +G++P+
Sbjct: 426 YNALIKG---------------------------FCKENKVEKGLKLYKELKALGLKPSG 458
Query: 307 FTYNSLINAHCLQDQMQDAMKV 328
Y +L+ + D + ++ +
Sbjct: 459 MAYAALVRNLKMSDSVATSLNL 480
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/473 (20%), Positives = 203/473 (42%), Gaps = 46/473 (9%)
Query: 143 TTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEG 202
T ++N L G +A + + E G+R + ++ ++ + + +VE
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 203 RGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK- 261
G K D + A++++ + G + +A+ +M G+ P TYN L +G + +
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPER 168
Query: 262 -------VLKKG---IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
+L++G + P++ TF+ +V +CK+ + A ++ M GV P+ TYN+
Sbjct: 169 SSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT 228
Query: 312 LINAHCLQ-DQMQDAMKVYDSMIYK-GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
+ + + + ++ +V + M+ K P+ T ++ G+C+ ++ + + M
Sbjct: 229 IATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKE 288
Query: 370 KGLTPDICTWNALVGGFCKA-------------------------GMPLAAKELISTMQK 404
+ ++ +N+L+ GF + G ++++ M++
Sbjct: 289 MRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKE 348
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD 464
D ITY+ +++ + +A +++E+ K + YSI+ G K
Sbjct: 349 CNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKK 408
Query: 465 AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
A E L + + +V +T ++ G C G +DDA ++ M + G PN T+ +
Sbjct: 409 AEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMW 467
Query: 525 GLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF-------SGNKADNTF 570
G L ++E+ LQ+M+G G + +T LL + NKA N
Sbjct: 468 GYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINAL 520
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 198/496 (39%), Gaps = 54/496 (10%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
R +L++ + + A F +A P++ +T L+ + K Y + S+V +
Sbjct: 48 RTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVE 107
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
G + DS F VIN + L M ++GL P T T++ G G E
Sbjct: 108 QSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPE 167
Query: 157 QA---LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
++ L L + + N T ++ CK A KK+E G + D Y
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT 273
I + G E + SE+ K V+K+ P+ T
Sbjct: 228 TIATCYVQKG---ETVRAESEVVEK----------------------MVMKEKAKPNGRT 262
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH----------------- 316
+V YC+EG + R + M + VE N+ +NSLIN
Sbjct: 263 CGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLL 322
Query: 317 --CLQDQMQ----DAMKVYDSMIYKGC--LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
++++ MKV + K C +TY+T+++ W M+KA + EMV
Sbjct: 323 LMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMV 382
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
G+ PD ++ L G+ +A P A+EL+ T+ + P+ + + ++ G
Sbjct: 383 KAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESR-PNVVIFTTVISGWCSNGSMD 441
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
+A+ ++ ++ K + +I + ++ G + A E ++ G+K + T+ ++
Sbjct: 442 DAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLA 501
Query: 489 QGLCREGLLDDAEQLL 504
+ GL D++ + +
Sbjct: 502 EAWRVAGLTDESNKAI 517
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 124/294 (42%), Gaps = 36/294 (12%)
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
V + + +++ + G A+ + +A G P++ +Y +L+ A +Q Q +
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
+ G ++ +N +I+ + + M+ A+ L +M GL P T+N L+ G+ AG
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAG 164
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
P + EL+ M + G + ++ +I ++
Sbjct: 165 KPERSSELLDLMLEEGNV--------------------------------DVGPNIRTFN 192
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD---M 507
+++ C ++++A E ++ G++ D TY + ++G AE +++ M
Sbjct: 193 VLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVM 252
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+EK PN T + V G R G + ++++ MK A+ LIN F
Sbjct: 253 KEKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/520 (22%), Positives = 219/520 (42%), Gaps = 27/520 (5%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P+ K+F +LI + + + ++M G + F + +++ L + DL V
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAV 250
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
+ GL + T +V GLC G +E+ L + RM E + + + + A+I L
Sbjct: 251 YEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVS 310
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
GN A++ + ++ K DV Y ++ LCKDG V L+ EM GK I D
Sbjct: 311 EGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREI 370
Query: 247 YNCLTRGLFHCSRGKV----------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGF 296
Y L G + GKV + G + D+ ++A++ C + +A +L
Sbjct: 371 YRVLIEGF--VADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQV 428
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
+EP+ T + ++ A+ + +++ D V + + G P + C ++
Sbjct: 429 AIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG-YPVSDYLTQFFKLLCADEE 487
Query: 357 MDK-AMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYA 415
+ A+ + + KG + +N L+ K G + L M+K G PD +Y+
Sbjct: 488 KNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYS 546
Query: 416 IILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDA-----REFFS 470
I + + A S + ++ +M+ I Y + GLC G + DA RE
Sbjct: 547 IAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEI-DAVMLLVRECLG 605
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
+++ ++ F Y + V +C+ + +++ +M ++G N+ Y + G+ + G
Sbjct: 606 NVESGPME---FKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHG 662
Query: 531 DISRSEKYLQLMKGKGFSADATTT---ELLINFFSGNKAD 567
I + + +K + +A E+LI AD
Sbjct: 663 TIKVAREVFTELKKRKVMTEADMVVYEEMLIEQTKKKTAD 702
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 161/424 (37%), Gaps = 44/424 (10%)
Query: 179 AIINGLCKVGNTSAAIGYFKKVEGR--GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
+I+ + K+GN +A F G+ G+K D Y A L ++G A L M
Sbjct: 126 SIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMD 185
Query: 237 GKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
+G P + L R RG K+ K G P V ++ I+D K G
Sbjct: 186 SQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFD 245
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
A + G+ T+ L+ C ++++ +++ M C P Y +I
Sbjct: 246 LALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMI 305
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
+D ++ + EM + PD+ + LV G CK G EL M+ L
Sbjct: 306 KTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQIL 365
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
DR Y ++++G A +L+ +L I IY+ ++ GLCS ++ A +
Sbjct: 366 IDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKL 425
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND------------ 516
F + L+ D T + ++ L D +L + E G P +D
Sbjct: 426 FQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCAD 485
Query: 517 ----------------------CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTT 554
YN+ ++ L + GDI +S M+ GF D+++
Sbjct: 486 EEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSY 545
Query: 555 ELLI 558
+ I
Sbjct: 546 SIAI 549
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 137/330 (41%), Gaps = 16/330 (4%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V+ + F +M + + + VLI V +A +L + + G AD +
Sbjct: 349 VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNA 408
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
VI LC +++ D + + + + LEPD TL+ I+ + + R+ E+G
Sbjct: 409 VIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG 468
Query: 170 YRCNSYTHGAIINGLCKVGNTSAA---IGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVN 226
Y + Y LC +A + Y K +G G V VY +M++L K G +
Sbjct: 469 YPVSDYL-TQFFKLLCADEEKNAMALDVFYILKTKGHG---SVSVYNILMEALYKMGDIQ 524
Query: 227 EALGLWSEMTGKGIQPDVVTYNC-----LTRGLFH--CS-RGKVLKKGIMPDVHTFSAIV 278
++L L+ EM G +PD +Y+ + +G CS K+++ +P + + ++
Sbjct: 525 KSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLT 584
Query: 279 DNYCKEGMIARAERLM-GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
C+ G I L+ + V P F Y + C + MKV D M +G
Sbjct: 585 KGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGV 644
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
+ V Y +I G K + A + E+
Sbjct: 645 FINEVIYCAIISGMSKHGTIKVAREVFTEL 674
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 183/420 (43%), Gaps = 35/420 (8%)
Query: 144 TIVNGLCAEGNVEQALGLA---MRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKV 200
++VN LC E A L +R DE ++ T +I + G AI F+
Sbjct: 140 SVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEF- 198
Query: 201 EGRGFK------FDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
R ++ ++ + ++D+LCK+G V EA ++ E G + + V
Sbjct: 199 -ARSYEPVCKSATELRLLEVLLDALCKEGHVREA-SMYLERIGGTMDSNWV--------- 247
Query: 255 FHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
P V F+ +++ + + + +AE+L M + V+P V TY +LI
Sbjct: 248 --------------PSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIE 293
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP 374
+C ++Q AM+V + M + + +N +I G + ++ +A+ ++ P
Sbjct: 294 GYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGP 353
Query: 375 DICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLY 434
I T+N+LV FCKAG A +++ M G P TY K + E ++LY
Sbjct: 354 TIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLY 413
Query: 435 RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
+L + Y ++L LC G+L A + ++ +G+ D+ T T+++ LCR
Sbjct: 414 FKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRL 473
Query: 495 GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTT 554
+L++A + + +G P T+ + GL +G +++ LM S T
Sbjct: 474 EMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNT 533
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 169/377 (44%), Gaps = 36/377 (9%)
Query: 72 FTVLINLVVKMKHYTTAISLV-KRMHSLG----IEADSFTFTIVINCLCRLSRTDLGFCV 126
F ++N + K + + A SLV R+ S + AD TF ++I R +
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSAD--TFIVLIRRYARAGMVQQA--I 193
Query: 127 LGLMFKMGLEP------DIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNS------ 174
F EP ++ L +++ LC EG+V +A +M ++ +G +S
Sbjct: 194 RAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREA---SMYLERIGGTMDSNWVPSV 250
Query: 175 YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
++NG + A +++++ K V Y +++ C+ V A+ + E
Sbjct: 251 RIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEE 310
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSR-GKVLKKGIM---------PDVHTFSAIVDNYCKE 284
M ++ + + +N + GL R + L G+M P + T++++V N+CK
Sbjct: 311 MKMAEMEINFMVFNPIIDGLGEAGRLSEAL--GMMERFFVCESGPTIVTYNSLVKNFCKA 368
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G + A +++ M GV+P TYN ++ ++ M +Y +I G P +TY
Sbjct: 369 GDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTY 428
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
+ ++ C+ K+ AM + EM N+G+ PD+ T L+ C+ M A E +
Sbjct: 429 HLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVR 488
Query: 405 HGQLPDRITYAIILDGL 421
G +P IT+ +I +GL
Sbjct: 489 RGIIPQYITFKMIDNGL 505
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 158/378 (41%), Gaps = 23/378 (6%)
Query: 204 GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM-TGKGIQPD----VVTYNCLTRGLFHCS 258
G + V + A+ D L ++ ++ W+EM G + P VV C R F +
Sbjct: 96 GIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKARE-FEIA 154
Query: 259 RGKVLKK------GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP------NV 306
V + + TF ++ Y + GM+ +A R F AR EP +
Sbjct: 155 WSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEF-AR-SYEPVCKSATEL 212
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSM---IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
L++A C + +++A + + + +PS +N L++GW + +K+ +A L
Sbjct: 213 RLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKL 272
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
EM + P + T+ L+ G+C+ A E++ M+ + + + I+DGL +
Sbjct: 273 WEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGE 332
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
EA+ + I Y+ ++ C G L A + + +G+ T
Sbjct: 333 AGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTT 392
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
Y + + ++ L + E G P+ TY+L ++ L G +S + + + MK
Sbjct: 393 YNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMK 452
Query: 544 GKGFSADATTTELLINFF 561
+G D TT +LI+
Sbjct: 453 NRGIDPDLLTTTMLIHLL 470
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 125/291 (42%), Gaps = 35/291 (12%)
Query: 64 NPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLG 123
N P+++ F +L+N + + A L + M ++ ++ T+ +I CR+ R +
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 124 FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNS----YTHGA 179
VL M +E + + I++GL G + +ALG+ R + C S T+ +
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERF----FVCESGPTIVTYNS 360
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
++ CK G+ A K + RG Y K E + L+ ++ G
Sbjct: 361 LVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAG 420
Query: 240 IQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR 299
PD +TY+ + + L C++G ++ A ++ M
Sbjct: 421 HSPDRLTYHLILKML---------------------------CEDGKLSLAMQVNKEMKN 453
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
G++P++ T LI+ C + +++A + +D+ + +G +P +T+ + +G
Sbjct: 454 RGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNG 504
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 23/313 (7%)
Query: 266 GIMPDVHTFSAIVDNYCKEGMIAR-----AERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
GI P V A+ D M+ AE GF + P++F +S++N+ C
Sbjct: 96 GIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFT----LSPSLF--DSVVNSLCKAR 149
Query: 321 QMQDAMK-VYDSMIYK--GCLPSTVTYNTLIHGWCKIKKMDKAMSLLG-----EMVNKGL 372
+ + A V+D + L S T+ LI + + + +A+ E V K
Sbjct: 150 EFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSA 209
Query: 373 TPDICTWNALVGGFCKAGMPLAAK---ELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
T ++ L+ CK G A E I +P + I+L+G F+ +
Sbjct: 210 T-ELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQ 268
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
A L+ E++ MN+ + Y +++G C R++ A E ++ ++I+ + ++
Sbjct: 269 AEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIID 328
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
GL G L +A ++ P TYN V+ + GD+ + K L++M +G
Sbjct: 329 GLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDP 388
Query: 550 DATTTELLINFFS 562
TT +FS
Sbjct: 389 TTTTYNHFFKYFS 401
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 24/292 (8%)
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
N KEG +AR L G RVG+ ++A KV+D M + C
Sbjct: 102 NMSKEGFVARIINLYG---RVGM-------------------FENAQKVFDEMPERNCKR 139
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKEL 398
+ +++N L++ KK D + E+ K + PD+ ++N L+ G C G A L
Sbjct: 140 TALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVAL 199
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
I ++ G PD IT+ I+L + + E ++ + + N+ R I Y+ L GL
Sbjct: 200 IDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAM 259
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
+ ++ F L+ LK DVFT+T M++G EG LD+A ++E+ GC P
Sbjct: 260 ENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFV 319
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD-ATTTELLINFFSGNKADNT 569
+N + + + GD+ + + + + K D A E++ G+K D
Sbjct: 320 FNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 127/281 (45%), Gaps = 19/281 (6%)
Query: 142 LTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVE 201
+ I+N G E A + M E + + + A++N G FK++
Sbjct: 109 VARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELP 168
Query: 202 GR-GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL-----TRGLF 255
G+ + DV Y ++ LC G EA+ L E+ KG++PD +T+N L T+G F
Sbjct: 169 GKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 256 HCSR---GKVLKKGIMPDVHTFSA-----IVDNYCKEGMIARAERLMGFMARVGVEPNVF 307
++++K + D+ +++A ++N +E M++ ++L G ++P+VF
Sbjct: 229 EEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEE-MVSLFDKLKG----NELKPDVF 283
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
T+ ++I + ++ +A+ Y + GC P +N+L+ CK ++ A L E+
Sbjct: 284 TFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
K L D +V K A+E++ + + L
Sbjct: 344 FAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTNDYL 384
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 127/317 (40%), Gaps = 55/317 (17%)
Query: 64 NPFPNI-KEFTV--LINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRT 120
N +PN+ KE V +INL ++ + A + M + + +F ++N +
Sbjct: 98 NKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKF 157
Query: 121 DLGFCVLG-LMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGA 179
DL + L K+ +EPD+ + T++ GLC +G+ +A+ L +DE
Sbjct: 158 DLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVAL---IDE------------ 202
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
+E +G K D + ++ G E +W+ M K
Sbjct: 203 --------------------IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKN 242
Query: 240 IQPDVVTYNCLTRG------------LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI 287
++ D+ +YN G LF +G LK PDV TF+A++ + EG +
Sbjct: 243 VKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELK----PDVFTFTAMIKGFVSEGKL 298
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
A + + G P F +NSL+ A C ++ A ++ + K L +
Sbjct: 299 DEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEV 358
Query: 348 IHGWCKIKKMDKAMSLL 364
+ K K D+A ++
Sbjct: 359 VDALVKGSKQDEAEEIV 375
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 50/294 (17%)
Query: 223 GLVNEALGLWSEMTGKGIQPDVVTYNCL------------TRGLFHCSRGKVLKKGIMPD 270
G+ A ++ EM + + +++N L G+F GK+ I PD
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL---SIEPD 176
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
V +++ ++ C +G A L+ + G++P+ T+N L++ + + ++ +++
Sbjct: 177 VASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWA 236
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
M+ K +YN + G K ++ +SL ++ L PD+ T+ A++ GF G
Sbjct: 237 RMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEG 296
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
LD EA++ Y+E+EK +++
Sbjct: 297 K--------------------------LD---------EAITWYKEIEKNGCRPLKFVFN 321
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
+L +C G L+ A E + AK L +D +V L + D+AE+++
Sbjct: 322 SLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 178/405 (43%), Gaps = 39/405 (9%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPF-PNIKEFTVLINLVVKMKHYTTAISLVKRMHS 97
E+LS +R+ + A FF + +++E+ +I+++ KM+ + TA +L+ M
Sbjct: 132 EILSRVRN--DWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK 189
Query: 98 LGIE-ADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
+S T I+I C + + LE I ++++ LC NV
Sbjct: 190 FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVS 249
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKV-GNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
A G + ++ Y ++ + ++NG C V G+ A + ++ G K DV Y+++
Sbjct: 250 DA-GHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSM 308
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFS 275
+ K G +N+ L L+ M + I+PD YN
Sbjct: 309 ISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN--------------------------- 341
Query: 276 AIVDNYCKEGMIARAERLMGFMARV-GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
A+V K ++ A LM M G+EPNV TYNSLI C + ++A +V+D M+
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 335 KGCLPSTVTYNTLIHGWCKIKKM-DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
KG P+ TY H + +I + ++ LL +M G P + T+ L+ C+
Sbjct: 402 KGLFPTIRTY----HAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFD 457
Query: 394 AAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
L M++ PD +Y +++ GLF EA Y+E++
Sbjct: 458 NVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMK 502
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 145/331 (43%), Gaps = 41/331 (12%)
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
T ++ YC + +A R +E + + SL++A C + DA
Sbjct: 198 QTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA----GH 253
Query: 332 MIY--KGCLP-STVTYNTLIHGWCK-IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+I+ K P ++N +++GWC I +A + EM N G+ D+ ++++++ +
Sbjct: 254 LIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYS 313
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN-LDRHI 446
K G +L M+K PDR Y ++ L K F EA +L + +E+ ++ ++
Sbjct: 314 KGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNV 373
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGL----------------------------- 477
Y+ ++ LC + ++A++ F + KGL
Sbjct: 374 VTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFELLAKMRK 433
Query: 478 ---KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
+ V TY ++++ LCR D+ L +M+EK P+ +Y + + GL G I
Sbjct: 434 MGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEE 493
Query: 535 SEKYLQLMKGKGFSADATTTELLINFFSGNK 565
+ Y + MK KG + +++ ++FSG +
Sbjct: 494 AYGYYKEMKDKGMRPNENVEDMIQSWFSGKQ 524
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 153/353 (43%), Gaps = 29/353 (8%)
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
Y+ ++ T+ A + L + + + +++ G+ D+ Y + K ++ E +
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETV 318
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGL-----------FHCSR-----GKVLKKGIMPDVHT 273
L+ M +P + + L R L F SR GK L K + +H
Sbjct: 319 KLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHR 378
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
V G AE + M G EP+ TY+ L+ C ++++A V D M
Sbjct: 379 SLTSV------GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQME 432
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
+GC P T+ LI G CK ++DKA++ M+ KG D + L+ GF
Sbjct: 433 AQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFE 492
Query: 394 AAKELISTMQKHGQL-PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIM 452
A + M K+ + P + TY +++D L K EA+ L + ++K N Y+
Sbjct: 493 GASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQN----YPAYAEA 548
Query: 453 LDG-LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
DG L +G L+DA++F L +K Y +++ REG L DA+ LL
Sbjct: 549 FDGYLAKFGTLEDAKKFLDVLSSKD-SPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 98/225 (43%), Gaps = 4/225 (1%)
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
STVTYN + + + + S++ EM G D+ T+ + F K+ M +L
Sbjct: 262 STVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLY 321
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPE---AVSLYRELEKMNLDRHITIYSIMLDGL 456
M G I +L P+ + R+ E +Y + L
Sbjct: 322 EYMMD-GPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSL 380
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
S GR +A E ++ G + D TY+ +V GLC+ L++A +L ME +GC P+
Sbjct: 381 TSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDI 440
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
T+ + +QG + ++ ++ M KGF D+ ++LI+ F
Sbjct: 441 KTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGF 485
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 1/158 (0%)
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A+E+ M+ G PD ITY+ ++ GL K EA + ++E I ++I++
Sbjct: 389 AEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQ 448
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM-EEKGCP 513
G C L A F+ + KG ID +++ G + A LM+M +
Sbjct: 449 GHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVK 508
Query: 514 PNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADA 551
P TY L + LL+ + LQ+MK + + A A
Sbjct: 509 PWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYA 546
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 88/216 (40%), Gaps = 7/216 (3%)
Query: 85 YTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTT 144
+ A + K M + G E D+ T++ ++ LC+ R + VL M G PDI T T
Sbjct: 386 FDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTI 445
Query: 145 IVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN--TSAAIGYFKKVEG 202
++ G C +++AL M E G+ +S +I+G + N A+I + V+
Sbjct: 446 LIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFV-IHNKFEGASIFLMEMVKN 504
Query: 203 RGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK- 261
K Y ++D L K EAL L M + ++ K
Sbjct: 505 ANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKK 564
Query: 262 ---VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLM 294
VL P + +++ + +EG + A+ L+
Sbjct: 565 FLDVLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 131/338 (38%), Gaps = 21/338 (6%)
Query: 90 SLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGL 149
S+V M + G + D T+ V + + M +P I + ++ L
Sbjct: 284 SVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYL 343
Query: 150 CAEGN--VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF 207
N ++ ++ + + G + + I L VG A K + G++
Sbjct: 344 SGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEP 403
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----- 262
D Y+ ++ LCK + EA G+ +M +G PD+ T+ L +G HC ++
Sbjct: 404 DNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQG--HCKNNELDKALA 461
Query: 263 -----LKKGIMPDVHTFSAIVDNYCKEGMIARAE-RLMGFMARVGVEPNVFTYNSLINAH 316
L+KG D + ++D + A LM + V+P TY LI+
Sbjct: 462 CFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKL 521
Query: 317 CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW-CKIKKMDKAMSLLGEMVNKGLTPD 375
+ ++A+ + M+ K P+ Y G+ K ++ A L + +K +P
Sbjct: 522 LKIKKSEEALDLL-QMMKKQNYPA---YAEAFDGYLAKFGTLEDAKKFLDVLSSKD-SPS 576
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRIT 413
+ ++ F + G AK L+ H + +I+
Sbjct: 577 FAAYFHVIEAFYREGRLTDAKNLLFICPHHFKTHPKIS 614
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 124/251 (49%), Gaps = 5/251 (1%)
Query: 273 TFSAIVDNYCKEGMIARA-ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
T S ++ K G +A + + GV+ + NSL++A ++ ++ A +V+
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF-L 263
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
++ P T+N LIHG+CK +K D A +++ M TPD+ T+ + V +CK G
Sbjct: 264 KLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGD 323
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
E++ M+++G P+ +TY I++ L K EA+ +Y ++++ YS
Sbjct: 324 FRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSS 383
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE-- 509
++ L GR KDA E F + +G++ DV Y M+ + A +LL ME+
Sbjct: 384 LIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEE 443
Query: 510 -KGCPPNDCTY 519
+ C PN TY
Sbjct: 444 GESCSPNVETY 454
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 17/316 (5%)
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVE-GRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
T ++ L K G + A+ F ++E G K D ++MD+L K+ + A ++ +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 235 MTGKGIQPDVVTYNCLTRGL-----FHCSRG-----KVLKKGIMPDVHTFSAIVDNYCKE 284
+ I+PD T+N L G F +R KV + PDV T+++ V+ YCKE
Sbjct: 265 LFD-TIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTE--FTPDVVTYTSFVEAYCKE 321
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G R ++ M G PNV TY ++++ Q+ +A+ VY+ M GC+P Y
Sbjct: 322 GDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ- 403
++LIH K + A + +M N+G+ D+ +N ++ A L+ M+
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMED 441
Query: 404 KHGQ--LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
+ G+ P+ TYA +L L + K ++ ++ Y +++ GLC G+
Sbjct: 442 EEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGK 501
Query: 462 LKDAREFFSGLQAKGL 477
+++A FF KG+
Sbjct: 502 VEEACLFFEEAVRKGM 517
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 165/394 (41%), Gaps = 17/394 (4%)
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYF----KKVEGRGFKFDVPVYTAIMDSLCKD 222
+ GY + +T+ A+++ L K N K E + D + +M L K
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDT--MSKVMRRLAKS 216
Query: 223 GLVNEALGLWSEMTGK-GIQPDVVTYNCLTRGL-----FHCSRGKVLK--KGIMPDVHTF 274
G N+A+ + EM G++ D + N L L + LK I PD TF
Sbjct: 217 GKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTF 276
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+ ++ +CK A +M M P+V TY S + A+C + + ++ + M
Sbjct: 277 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
GC P+ VTY ++H K K++ +A+ + +M G PD +++L+ K G
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKD 396
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR---HITIYSI 451
A E+ M G D + Y ++ A+ L + +E + ++ Y+
Sbjct: 397 AAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAP 456
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
+L C ++K + + IDV TY ++++GLC G +++A + KG
Sbjct: 457 LLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKG 516
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
P D T + V L ++ K L++ K
Sbjct: 517 MVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSK 550
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 126/260 (48%), Gaps = 11/260 (4%)
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
I+ D+ TF I+I+ C+ + D ++ LM PD+VT T+ V C EG+ +
Sbjct: 269 IKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVN 328
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ M E G N T+ +++ L K + A+G ++K++ G D Y++++ L
Sbjct: 329 EMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHIL 388
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG----KVLKK-------GIM 268
K G +A ++ +MT +G++ DV+ YN + H SR ++LK+
Sbjct: 389 SKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCS 448
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P+V T++ ++ C + + L+ M + V +V TY LI C+ ++++A
Sbjct: 449 PNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLF 508
Query: 329 YDSMIYKGCLPSTVTYNTLI 348
++ + KG +P T L+
Sbjct: 509 FEEAVRKGMVPRDSTCKMLV 528
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 99/231 (42%), Gaps = 6/231 (2%)
Query: 336 GCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL---VGGFCKAGMP 392
G + S TYN ++ K + D L+ EM NK + T + + + K+G
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEM-NKNEESKLVTLDTMSKVMRRLAKSGKY 219
Query: 393 LAAKELISTMQK-HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
A + M+K +G D I ++D L K + A ++ +L + ++I
Sbjct: 220 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNI 278
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
++ G C + DAR ++ DV TYT V+ C+EG ++L +M E G
Sbjct: 279 LIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG 338
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
C PN TY + + L + ++ + + MK G DA LI+ S
Sbjct: 339 CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKH--GQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
T+NA+V K EL++ M K+ +L T + ++ L K Y +AV +
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 436 ELEKMNLDRHITI-YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
E+EK + TI + ++D L ++ A E F L +K D T+ I++ G C+
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKA 286
Query: 495 GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTT 554
DDA ++ M+ P+ TY FV+ + GD R + L+ M+ G + + T
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 555 ELLINFFSGNK 565
++++ +K
Sbjct: 347 TIVMHSLGKSK 357
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 10/222 (4%)
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKE---- 397
T + ++ K K +KA+ EM G+ D N+L+ K A E
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK 264
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
L T++ PD T+ I++ G K + +A ++ ++ + Y+ ++ C
Sbjct: 265 LFDTIK-----PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYC 319
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC 517
G + E ++ G +V TYTI++ L + + +A + M+E GC P+
Sbjct: 320 KEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAK 379
Query: 518 TYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
Y+ + L + G + + + M +G D +I+
Sbjct: 380 FYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMIS 421
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 202/462 (43%), Gaps = 39/462 (8%)
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALG-LAM 163
FT V+ R ++ + G + + G+ P+I+T I E AL +
Sbjct: 131 FTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKL 190
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
+D + T ++ GL N A+ + + +GF D VY+ +M K+
Sbjct: 191 FIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNS 250
Query: 224 LVNEALGLWSEMTGK--GIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNY 281
+ L L+ E+ K G D V Y L +G F K ++K M
Sbjct: 251 DADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFM----KEMEKEAME------------ 294
Query: 282 CKEGMIARAERL-MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
C E + ++ M MA YN ++ A + +A+K++D++ + P
Sbjct: 295 CYEEAVGENSKVRMSAMA----------YNYVLEALSENGKFDEALKLFDAVKKEHNPPR 344
Query: 341 TV-----TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAA 395
+ T+N +++G+C K ++AM + +M + +PD ++N L+ C + A
Sbjct: 345 HLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEA 404
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
++L M++ PD TY +++D FK E + Y+ + + NL ++ +Y+ + D
Sbjct: 405 EKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQ 464
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
L G+L DA+ FF + +K LK+D Y +++ L G LD+ +++ +M +
Sbjct: 465 LIKAGKLDDAKSFFDMMVSK-LKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRV 523
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKG-FSADATTTEL 556
FV+ LR+G R +LM+ K A+A EL
Sbjct: 524 SEELQEFVKEELRKG--GREGDLEKLMEEKERLKAEAKAKEL 563
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 134/301 (44%), Gaps = 10/301 (3%)
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P + T + ++ ++ +L GF+ + G+ PN+ TYN + A+ + + A++
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 329 YDSMIYKGCL-PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
Y I L PS T+ L+ G ++KAM + +M KG D ++ L+ G
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 388 KAGMPLAAKELISTMQKH--GQLPDRITYAIILDGLFKCHFYPEAVSLYREL--EKMNLD 443
K +L +++ G + D + Y ++ G F EA+ Y E E +
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQ-----AKGLKIDVFTYTIMVQGLCREGLLD 498
Y+ +L+ L G+ +A + F ++ + L +++ T+ +MV G C G +
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 499 DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
+A ++ M + C P+ ++N + L ++ +EK M+ K D T LL+
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 559 N 559
+
Sbjct: 428 D 428
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 6/201 (2%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFP-----NIKEFTVLINLVVKMKHYTTAISLVKR 94
+L ++ + D A+ F+ + + P N+ F V++N + A+ + ++
Sbjct: 316 VLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQ 375
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN 154
M D+ +F ++N LC + G M + ++PD T +++ EG
Sbjct: 376 MGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGK 435
Query: 155 VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
+++ M E R N + + + L K G A +F + + K D Y
Sbjct: 436 IDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSK-LKMDDEAYKF 494
Query: 215 IMDSLCKDGLVNEALGLWSEM 235
IM +L + G ++E L + EM
Sbjct: 495 IMRALSEAGRLDEMLKIVDEM 515
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 89/150 (59%), Gaps = 1/150 (0%)
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M R + P TYNS+I+ C QD++ DA ++ DSM KGC P VT++TLI+G+CK K+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+D M + EM +G+ + T+ L+ GFC+ G AA++L++ M G PD IT+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
+L GL +A ++ +L+K D H+
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQKSE-DHHL 149
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 88/143 (61%)
Query: 262 VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
+L+ I P T+++++D +CK+ + A+R++ MA G P+V T+++LIN +C +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
+ + M+++ M +G + +TVTY TLIHG+C++ +D A LL EM++ G+ PD T++
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 382 LVGGFCKAGMPLAAKELISTMQK 404
++ G C A ++ +QK
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 71/142 (50%)
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
M+ P+T+TYN++I G+CK ++D A +L M +KG +PD+ T++ L+ G+CKA
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
E+ M + G + + +TY ++ G + A L E+ + +
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 452 MLDGLCSYGRLKDAREFFSGLQ 473
ML GLCS L+ A LQ
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQ 142
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 73/143 (51%)
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
M+ + P T+N+++ GFCK AK ++ +M G PD +T++ +++G K
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+ ++ E+ + + + Y+ ++ G C G L A++ + + + G+ D T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 487 MVQGLCREGLLDDAEQLLMDMEE 509
M+ GLC + L A +L D+++
Sbjct: 121 MLAGLCSKKELRKAFAILEDLQK 143
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M + + P +T ++++G C + V+ A + M G + T +ING CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
+ F ++ RG + YT ++ C+ G ++ A L +EM G+ PD +T++C
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 250 LTRGLFHCSRGKVLKK-GIMPDVH 272
+ GL CS+ ++ K I+ D+
Sbjct: 121 MLAGL--CSKKELRKAFAILEDLQ 142
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
Y+ M+DG C R+ DA+ + +KG DV T++ ++ G C+ +D+ ++ +M
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
+G N TY + G + GD+ ++ L M G + D T
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 117
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
VD A + MA+ P++ F+ LIN K K + + MH GI A++ T+T
Sbjct: 26 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 85
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGL 161
+I+ C++ D +L M G+ PD +T ++ GLC++ + +A +
Sbjct: 86 LIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 137
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%)
Query: 66 FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFC 125
FP + +I+ K A ++ M S G D TF+ +IN C+ R D G
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
+ M + G+ + VT TT+++G C G+++ A L M G + T ++ GLC
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 186 KVGNTSAAIGYFKKVE 201
A + ++
Sbjct: 127 SKKELRKAFAILEDLQ 142
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 4/292 (1%)
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
++T + I+ + G A + + G+E N + N L++ C + +++ A +V
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVL 213
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
+ P+ T+N IHGWCK ++++A+ + EM G P + ++ ++ +C+
Sbjct: 214 LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
+ E++S M+ +G P+ ITY I+ L + EA+ + +++ Y+
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 451 IMLDGLCSYGRLKDA-REFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
++ L GRL++A R F + G+ I+ TY M+ C D A +LL +ME
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 510 KG-CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK-GFSADATTTELLIN 559
C P+ TY ++ +RGD+ K L+ M K S D +T LI
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 161/398 (40%), Gaps = 49/398 (12%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFT--------VLINLVVKMK-------HYTTAISLVKRM 95
D AVD K + +KEF V +N V K+ + A+ + R+
Sbjct: 125 DMAVDILGKA---KKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 96 HSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV 155
G+E ++ + ++++ LC+ R + VL L K + P+ T ++G C V
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTFNIFIHGWCKANRV 240
Query: 156 EQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
E+AL M G+R ++ II C+ ++E G + YT I
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFS 275
M SL EAL + + M G +PD + YNCL +HT +
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL--------------------IHTLA 340
Query: 276 AIVDNYCKEGMIARAERLMGF-MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+ G + AER+ M +GV N TYNS+I +C D+ A+++ M
Sbjct: 341 -------RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 335 KG-CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMP 392
C P TY L+ K + + LL EMV K L+ D T+ L+ C+A M
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMC 453
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
A L M P T ++L+ + K + + A
Sbjct: 454 EWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESA 491
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 18/349 (5%)
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV---------LKK 265
IM G EA+G++ + G++ + + N L L C +V LK
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL--CKEKRVEQARVVLLQLKS 218
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
I P+ HTF+ + +CK + A + M G P V +Y ++I +C Q +
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV 278
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
++ M G P+++TY T++ K+ ++A+ + M G PD +N L+
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 386 FCKAGMPLAAKELIST-MQKHGQLPDRITYAIILDGLFKCHFYPE--AVSLYRELEKMNL 442
+AG A+ + M + G + TY ++ CH E A+ L +E+E NL
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMI--AMYCHHDEEDKAIELLKEMESSNL 396
Query: 443 -DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK-GLKIDVFTYTIMVQGLCREGLLDDA 500
+ + Y +L G + + + + K L +D TYT ++Q LCR + + A
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWA 456
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
L +M + P T L ++ + ++ +E+ +MK +A
Sbjct: 457 YCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTA 505
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 10/229 (4%)
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
KG S+ Y+ + K KK D+ + M L + T ++ F AG
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEE 173
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT----IYS 450
A + + + G + + ++LD L K +A + + L HIT ++
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-----LQLKSHITPNAHTFN 228
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
I + G C R+++A ++ G + V +YT +++ C++ ++L +ME
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 511 GCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
G PPN TY + L + + + + MK G D+ LI+
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIH 337
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 138/292 (47%), Gaps = 4/292 (1%)
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
++T + I+ + G A + + G+E N + N L++ C + +++ A +V
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQA-RVVL 213
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
+ P+ T+N IHGWCK ++++A+ + EM G P + ++ ++ +C+
Sbjct: 214 LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
+ E++S M+ +G P+ ITY I+ L + EA+ + +++ Y+
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 451 IMLDGLCSYGRLKDA-REFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
++ L GRL++A R F + G+ I+ TY M+ C D A +LL +ME
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 510 KG-CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK-GFSADATTTELLIN 559
C P+ TY ++ +RGD+ K L+ M K S D +T LI
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 161/398 (40%), Gaps = 49/398 (12%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFT--------VLINLVVKMK-------HYTTAISLVKRM 95
D AVD K + +KEF V +N V K+ + A+ + R+
Sbjct: 125 DMAVDILGKA---KKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRL 181
Query: 96 HSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV 155
G+E ++ + ++++ LC+ R + VL L K + P+ T ++G C V
Sbjct: 182 GEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-LQLKSHITPNAHTFNIFIHGWCKANRV 240
Query: 156 EQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
E+AL M G+R ++ II C+ ++E G + YT I
Sbjct: 241 EEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTI 300
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFS 275
M SL EAL + + M G +PD + YNCL +HT +
Sbjct: 301 MSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCL--------------------IHTLA 340
Query: 276 AIVDNYCKEGMIARAERLMGF-MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+ G + AER+ M +GV N TYNS+I +C D+ A+++ M
Sbjct: 341 -------RAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMES 393
Query: 335 KG-CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMP 392
C P TY L+ K + + LL EMV K L+ D T+ L+ C+A M
Sbjct: 394 SNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMC 453
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
A L M P T ++L+ + K + + A
Sbjct: 454 EWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESA 491
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 150/349 (42%), Gaps = 18/349 (5%)
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV---------LKK 265
IM G EA+G++ + G++ + + N L L C +V LK
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL--CKEKRVEQARVVLLQLKS 218
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
I P+ HTF+ + +CK + A + M G P V +Y ++I +C Q +
Sbjct: 219 HITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKV 278
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
++ M G P+++TY T++ K+ ++A+ + M G PD +N L+
Sbjct: 279 YEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHT 338
Query: 386 FCKAGMPLAAKELIST-MQKHGQLPDRITYAIILDGLFKCHFYPE--AVSLYRELEKMNL 442
+AG A+ + M + G + TY ++ CH E A+ L +E+E NL
Sbjct: 339 LARAGRLEEAERVFRVEMPELGVSINTSTYNSMI--AMYCHHDEEDKAIELLKEMESSNL 396
Query: 443 -DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK-GLKIDVFTYTIMVQGLCREGLLDDA 500
+ + Y +L G + + + + K L +D TYT ++Q LCR + + A
Sbjct: 397 CNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWA 456
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
L +M + P T L ++ + ++ +E+ +MK +A
Sbjct: 457 YCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKTVKLTA 505
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 10/229 (4%)
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
KG S+ Y+ + K KK D+ + M L + T ++ F AG
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKLVT-LNTVAKIMRRFAGAGEWEE 173
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHIT----IYS 450
A + + + G + + ++LD L K +A + + L HIT ++
Sbjct: 174 AVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL-----LQLKSHITPNAHTFN 228
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
I + G C R+++A ++ G + V +YT +++ C++ ++L +ME
Sbjct: 229 IFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEAN 288
Query: 511 GCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
G PPN TY + L + + + + MK G D+ LI+
Sbjct: 289 GSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIH 337
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 115/562 (20%), Positives = 234/562 (41%), Gaps = 72/562 (12%)
Query: 46 DLKTVDAAVDFFNKMAAI-------NPFPNIKEFT----VLINLVVKMKHYTTAISLVKR 94
D + V A++ F+ + ++ + P + V++NL + ++ A+ L +
Sbjct: 22 DTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL--RSGNWEKAVELFRE 79
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN 154
M G +A T ++ G + G + ++GLE ++ +++ G
Sbjct: 80 MQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGK 139
Query: 155 VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
+E + + M + N + +I++ K+G AIG ++E G K D+ + +
Sbjct: 140 LELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNS 195
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF---HCSRGK-----VLKKG 266
++ GL +A+ + M G++P + + L + + H GK +L+
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
+ DV+ + ++D Y K G + A + M N+ +NSL++ ++DA
Sbjct: 256 LWYDVYVETTLIDMYIKTGYLPYARMVFDMMD----AKNIVAWNSLVSGLSYACLLKDAE 311
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
+ M +G P +T+N+L G+ + K +KA+ ++G+M KG+ P++ +W A+ G
Sbjct: 312 ALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGC 371
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL--------------------FKCHF 426
K G A ++ MQ+ G P+ T + +L L C
Sbjct: 372 SKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDA 431
Query: 427 Y---------------PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
Y A+ ++ ++ ++ + ++ ML G +GR ++ FS
Sbjct: 432 YVATALVDMYGKSGDLQSAIEIFWGIK----NKSLASWNCMLMGYAMFGRGEEGIAAFSV 487
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK-GCPPNDCTYNLFVQGLLRRG 530
+ G++ D T+T ++ GL+ + + M + G P + V L R G
Sbjct: 488 MLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSG 547
Query: 531 DISRSEKYLQLMKGKGFSADAT 552
+ + ++Q M K DAT
Sbjct: 548 YLDEAWDFIQTMSLK---PDAT 566
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 141/288 (48%), Gaps = 12/288 (4%)
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
KEG A ++ G++ R+G+E NV NSLI + +++ + KV++SM + +
Sbjct: 102 KEG-FAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR----NLS 156
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
++N+++ + K+ +D A+ LL EM GL PDI TWN+L+ G+ G+ A ++ M
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 403 QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
Q G P + + +L + + +++ + + L + + + ++D G L
Sbjct: 217 QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYL 276
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLF 522
AR F + AK ++ + +V GL LL DAE L++ ME++G P+ T+N
Sbjct: 277 PYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSL 332
Query: 523 VQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNTF 570
G G ++ + MK KG + + + + FSG + F
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAI---FSGCSKNGNF 377
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/462 (21%), Positives = 208/462 (45%), Gaps = 32/462 (6%)
Query: 118 SRTDLGFC--VLGLMFKM---GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
S T LG+ +GL+ +M GL+PDIVT ++++G ++G + A+ + RM G +
Sbjct: 164 SYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKP 223
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
++ + +++ + + G+ + +DV V T ++D K G + A ++
Sbjct: 224 STSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVF 283
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDVHTFSAIVDNYCKE 284
M K ++V +N L GL + K + K+GI PD T++++ Y
Sbjct: 284 DMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL 339
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G +A ++G M GV PNV ++ ++ + ++A+KV+ M +G P+ T
Sbjct: 340 GKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATM 399
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
+TL+ + + + G + K L D ALV + K+G +A E+ ++
Sbjct: 400 STLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN 459
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD 464
++ +L G E ++ + + + ++ ++ +L + G +++
Sbjct: 460 ----KSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQE 515
Query: 465 AREFFSGLQAK-GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
++F ++++ G+ + + MV L R G LD+A + M K P+ + F+
Sbjct: 516 GWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK---PDATIWGAFL 572
Query: 524 QGLLRRGDISRSE---KYLQLMKGKGFSADATTTELLINFFS 562
D+ +E K LQ+++ ++ ++IN +S
Sbjct: 573 SSCKIHRDLELAEIAWKRLQVLE----PHNSANYMMMINLYS 610
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 186/414 (44%), Gaps = 25/414 (6%)
Query: 122 LGFCVLGLMFKMGLEPD---IVTLTTIVNGLCAEGNVEQALGLAMRM-DEMGYRCN-SYT 176
LG + G + K GL+ +V+ + G C +LG A ++ DEM R + ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCV------SLGFANKLFDEMPKRDDLAWN 58
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFK-FDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
++N + GN A+ F++++ G K +D + + K+G E + +
Sbjct: 59 EIVMVN--LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFA-EGRQIHGYV 115
Query: 236 TGKGIQPDVVTYNCLT-----RGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
G++ +V N L G SR KV ++ ++++I+ +Y K G + A
Sbjct: 116 LRLGLESNVSMCNSLIVMYSRNGKLELSR-KVFNSMKDRNLSSWNSILSSYTKLGYVDDA 174
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
L+ M G++P++ T+NSL++ + + +DA+ V M G PST + ++L+
Sbjct: 175 IGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQA 234
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
+ + ++ G ++ L D+ L+ + K G A+ + M +
Sbjct: 235 VAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDA----KN 290
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
+ + ++ GL +A +L +EK + ++ + G + G+ + A +
Sbjct: 291 IVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIG 350
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
++ KG+ +V ++T + G + G +A ++ + M+E+G PN T + ++
Sbjct: 351 KMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 126/282 (44%), Gaps = 25/282 (8%)
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
A +L+ RM GI+ D+ T+ + + L + + V+G M + G+ P++V+ T I +
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 148 GLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEG----R 203
G GN AL + ++M E G N+ A ++ L K+ + + K+V G +
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNA----ATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 204 GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK-- 261
D V TA++D K G + A+ ++ + K + ++NC+ G RG+
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL----ASWNCMLMGYAMFGRGEEG 481
Query: 262 ------VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM-ARVGVEPNVFTYNSLIN 314
+L+ G+ PD TF++++ G++ + M +R G+ P + + +++
Sbjct: 482 IAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVD 541
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
+ +A +M K P + + CKI +
Sbjct: 542 LLGRSGYLDEAWDFIQTMSLK---PDATIWGAFLSS-CKIHR 579
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 118/505 (23%), Positives = 207/505 (40%), Gaps = 53/505 (10%)
Query: 53 AVDFFNKMAAINP---FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
A+ FFN AA P +I ++ +L + + ++ +L K++ S I DS +
Sbjct: 65 ALGFFN-WAAQQPGYSHDSISYHSIFKSLSLS-RQFSAMDALFKQVKSNKILLDSSVYRS 122
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLE--PDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
+I+ L + F VL F G E PD+ ++ GL ++G + A L ++M
Sbjct: 123 LIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCN--RLLAGLTSDGCYDYAQKLFVKMRH 180
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA-IMDSLCKDGLVN 226
G N+ G I C+ T+ + +V+ + + I+ SLCK
Sbjct: 181 KGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREM 240
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHC----SRGKVLKK----GIMPDVHTFSAIV 278
+A + E+ +PD + Y + R VLKK G+ P + A +
Sbjct: 241 DAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFI 300
Query: 279 --------------------------DNYCKEGMIAR--------AERLMGFMARVGVEP 304
DN + +I A + +M G P
Sbjct: 301 LDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLP 360
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
+ T + L C D+ +K Y+ + KG +Y+ +I CK ++ ++ + L
Sbjct: 361 AIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTAL 420
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
EM +GL PD+ +NAL+ CKA M AK+L M G + TY +++ L +
Sbjct: 421 QEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEE 480
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLK-IDVFT 483
E++ L+ ++ + ++ TIY +++GLC +++ A E F + K +
Sbjct: 481 GEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRV 540
Query: 484 YTIMVQGLCREGLLDDAEQLLMDME 508
+ V LC G +A QLL + E
Sbjct: 541 LSEFVLNLCSNGHSGEASQLLRERE 565
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 178/451 (39%), Gaps = 26/451 (5%)
Query: 128 GLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGL-AMRMDEMGYRCNSYTHGAIINGLCK 186
GL F+ + P +V +++ + ALG + GY +S ++ +I L
Sbjct: 38 GLGFRHSISPSLVA--RVIDPFLLNHH-SLALGFFNWAAQQPGYSHDSISYHSIFKSLSL 94
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM--TGKGIQPDV 244
SA FK+V+ D VY +++D+L A + E TG+ I PDV
Sbjct: 95 SRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDV 154
Query: 245 VTYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLM 294
N L GL S G K+ KG+ + F + +C+ + RL+
Sbjct: 155 C--NRLLAGL--TSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLV 210
Query: 295 GFMARVGVEPNVFTYNSLI-NAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
+ + + N LI ++ C + DA + + + C P + Y + +
Sbjct: 211 DEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVV 270
Query: 354 IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP--DR 411
+ + +L + G+ P + A + A AKE+ + G+ P +
Sbjct: 271 TGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVS-GKFPMDND 329
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
I A+I G AV + I S + LC + + + +
Sbjct: 330 ILDALI--GSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYEL 387
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGD 531
L +KG ++ +Y++M+ LC+ G + ++ L +M+++G P+ YN ++ +
Sbjct: 388 LSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEM 447
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLINFFS 562
I ++K M +G + TT +LI S
Sbjct: 448 IRPAKKLWDEMFVEGCKMNLTTYNVLIRKLS 478
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 7/213 (3%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
D+AV+F M + P I+ + L + + I + + S G ++ +++++
Sbjct: 344 DSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLM 403
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
I+ LC+ R + L M K GL PD+ ++ C + A L M G
Sbjct: 404 ISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGC 463
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
+ N T+ +I L + G ++ F K+ RG + D +Y ++++ LCK+ + A+
Sbjct: 464 KMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAM- 522
Query: 231 LWSEMTGKGIQPD--VVTYNCLTRGLFH-CSRG 260
E+ K ++ D VT L+ + + CS G
Sbjct: 523 ---EVFRKCMERDHKTVTRRVLSEFVLNLCSNG 552
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 155/353 (43%), Gaps = 20/353 (5%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
E+L + ++ + F++M+ + F N K + VL+N A+ + +R
Sbjct: 148 EILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEF 207
Query: 99 GIEADSFTFTIVINCLCRLSRTDLG---FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV 155
GI+ D F ++ LCR + FC F DI + I+NG C GNV
Sbjct: 208 GIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC----DIKAMNMILNGWCVLGNV 263
Query: 156 EQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
+A + R + ++G +IN L K G A+ ++ + DV + +
Sbjct: 264 HEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNV 323
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK---------VLKKG 266
+D+LC + EAL ++ E++ KG P+VVTYN L + L R + LK G
Sbjct: 324 IDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGG 383
Query: 267 -IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
P+ TFS ++ Y + + ++ MA+ E YN + + D+ +
Sbjct: 384 SCSPNDVTFSYLL-KYSQRS--KDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKV 440
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
+++ M G P TY IHG K+ +A+S EM++KG+ P+ T
Sbjct: 441 REIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 105/486 (21%), Positives = 203/486 (41%), Gaps = 56/486 (11%)
Query: 56 FFNKMAAINPFPNI------KEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
F + + A + FPN K+ + ++ ++K ++ + + + GI+ T +
Sbjct: 55 FLHSLGAPDKFPNRFNDDKDKQSALDVHNIIKHHRGSSPEKIKRILDKCGID---LTEEL 111
Query: 110 VINCLCRLSRTDL--GFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE 167
V+ + R +R+D + + L+ K + L + L G + + DE
Sbjct: 112 VLEVVNR-NRSDWKPAYILSQLVVKQSVHLSSSMLYNEI--LDVLGKMRRFEEFHQVFDE 168
Query: 168 MGYR---CNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
M R N T+ ++N A+G F++ + G D+ + ++ LC+
Sbjct: 169 MSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKH 228
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKE 284
V A L+ C R F C D+ + I++ +C
Sbjct: 229 VEFAETLF----------------CSRRREFGC------------DIKAMNMILNGWCVL 260
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G + A+R + P+V +Y ++INA + ++ AM++Y +M P
Sbjct: 261 GNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKIC 320
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
N +I C K++ +A+ + E+ KG P++ T+N+L+ CK EL+ M+
Sbjct: 321 NNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
Query: 405 HGQL--PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR-HIT--IYSIMLDGLCSY 459
G P+ +T++ +L + + + LE+M ++ +T +Y++M +
Sbjct: 381 KGGSCSPNDVTFSYLLK------YSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQW 434
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
+ + RE +S ++ GL D TYTI + GL +G + +A +M KG P T
Sbjct: 435 DKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTE 494
Query: 520 NLFVQG 525
L Q
Sbjct: 495 MLLNQN 500
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 173/402 (43%), Gaps = 39/402 (9%)
Query: 102 ADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGL 161
+ S + +++ L ++ R + V M K + T ++N A V++A+G+
Sbjct: 141 SSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGV 200
Query: 162 AMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCK 221
R E G + ++ LC+ + A F R F D+ I++ C
Sbjct: 201 FERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIKAMNMILNGWCV 259
Query: 222 DGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNY 281
G V+EA W ++ +PDVV+Y + L
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINAL--------------------------- 292
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
K+G + +A L M P+V N++I+A C + ++ +A++V+ + KG P+
Sbjct: 293 TKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNV 352
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKG--LTPDICTWNALVGGFCKAGMPLAAKELI 399
VTYN+L+ CKI++ +K L+ EM KG +P+ T++ L+ +K++
Sbjct: 353 VTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLL------KYSQRSKDVD 406
Query: 400 STMQKHGQLPDRIT---YAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
+++ + +T Y ++ + + ++ E+E+ L Y+I + GL
Sbjct: 407 IVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGL 466
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
+ G++ +A +F + +KG+ + T ++ Q + + D
Sbjct: 467 HTKGKIGEALSYFQEMMSKGMVPEPRTEMLLNQNKTKPRVED 508
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 108/230 (46%), Gaps = 3/230 (1%)
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
N TY L+N + ++ +A+ V++ G V ++ L+ C+ K ++ A +L
Sbjct: 177 NEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF 236
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
+ DI N ++ G+C G AK + PD ++Y +++ L K
Sbjct: 237 CSR-RREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKK 295
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
+A+ LYR + + + I + ++D LC R+ +A E F + KG +V TY
Sbjct: 296 GKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTY 355
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEKG--CPPNDCTYNLFVQGLLRRGDI 532
+++ LC+ + +L+ +ME KG C PND T++ ++ R D+
Sbjct: 356 NSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDV 405
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 144/363 (39%), Gaps = 23/363 (6%)
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR------------GLFHCS 258
+Y I+D L K E ++ EM+ + + TY L G+F
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF--E 202
Query: 259 RGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR-VGVEPNVFTYNSLINAHC 317
R K GI D+ F ++ C+ + AE L R G ++ N ++N C
Sbjct: 203 RRKEF--GIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC--DIKAMNMILNGWC 258
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
+ + +A + + +I C P V+Y T+I+ K K+ KAM L M + PD+
Sbjct: 259 VLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVK 318
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
N ++ C A E+ + + G P+ +TY +L L K + L E+
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
Query: 438 EKMNLDRHITIYSIMLDGLCSYG-RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
E + + L Y R KD + ++ Y +M + +
Sbjct: 379 ELKGGS--CSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDK 436
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTEL 556
+ ++ +ME G P+ TY + + GL +G I + Y Q M KG + TE+
Sbjct: 437 EEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEP-RTEM 495
Query: 557 LIN 559
L+N
Sbjct: 496 LLN 498
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 113/262 (43%), Gaps = 9/262 (3%)
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
YN +++ + ++ +V+D M + + TY L++ + K+D+A+ +
Sbjct: 146 YNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRK 205
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
G+ D+ ++ L+ C+ A+ L + ++ D +IL+G
Sbjct: 206 EFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCVLGNVH 264
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
EA ++++ + Y M++ L G+L A E + + DV ++
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQL-----MK 543
LC + + +A ++ ++ EKG PN TYN ++ L + I R+EK +L +K
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK---IRRTEKVWELVEEMELK 381
Query: 544 GKGFSADATTTELLINFFSGNK 565
G S + T L+ + +K
Sbjct: 382 GGSCSPNDVTFSYLLKYSQRSK 403
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 95/248 (38%), Gaps = 15/248 (6%)
Query: 47 LKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFT 106
L V A F+ + A P++ + +IN + K A+ L + M D
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
VI+ LC R V + + G +P++VT +++ LC E+ L M+
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIG-YFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
G C+ + + L K S + +++ + +Y + +
Sbjct: 380 LKGGSCSP--NDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKE 437
Query: 226 NEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMPDVHTFS 275
+ +WSEM G+ PD TY GL ++GK+ + KG++P+ T
Sbjct: 438 EKVREIWSEMERSGLGPDQRTYTIRIHGLH--TKGKIGEALSYFQEMMSKGMVPEPRTEM 495
Query: 276 AIVDNYCK 283
+ N K
Sbjct: 496 LLNQNKTK 503
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 184/424 (43%), Gaps = 15/424 (3%)
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSA 192
+GL DIV L E V A+R E G + ++ I+ L + S
Sbjct: 113 IGLSIDIVADVLNRGNLSGEAMV-TFFDWAVR--EPGVTKDVGSYSVILRALGRRKLFSF 169
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
+ K + G D+ T MDS + V A+ L+ E G++ ++N L R
Sbjct: 170 MMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLR 229
Query: 253 GL---FHCSRGKVL---KKGIMP-DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
L H S K + KKG +P D +++ ++ + K G + E+++ M G P+
Sbjct: 230 CLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPD 289
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
+Y+ LI ++ D+++++D++ +KG +P YN +I + + D++M
Sbjct: 290 CLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYR 349
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
M+++ P++ T++ LV G K A E+ M G LP L L C
Sbjct: 350 RMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPL--CS 407
Query: 426 FYP--EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
+ P A+ +Y++ K + Y ++L L +G+ + +Q G DV
Sbjct: 408 YGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEV 467
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK-YLQLM 542
Y +V GLC G L++A ++ + KG PN Y+ L+ + K +L++
Sbjct: 468 YEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIK 527
Query: 543 KGKG 546
K +
Sbjct: 528 KARA 531
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 167/372 (44%), Gaps = 24/372 (6%)
Query: 202 GRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK--GIQPDVVTYNCLTRGLFHCSR 259
G G D+ + D L + L EA+ + + + G+ DV +Y+ + R L R
Sbjct: 112 GIGLSIDI-----VADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRAL---GR 163
Query: 260 GK-------VLK----KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFT 308
K VLK +G+ PD+ + +D++ + + RA L GV+ + +
Sbjct: 164 RKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTES 223
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLP-STVTYNTLIHGWCKIKKMDKAMSLLGEM 367
+N+L+ C + + A V+++ KG +P + +YN +I GW K+ ++++ +L EM
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNAK--KGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEM 281
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
V G PD +++ L+ G + G + E+ ++ G +PD Y ++ +
Sbjct: 282 VESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDF 341
Query: 428 PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIM 487
E++ YR + + ++ YS ++ GL ++ DA E F + ++G+ T
Sbjct: 342 DESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSF 401
Query: 488 VQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
++ LC G A + + GC ++ Y L ++ L R G M+ G+
Sbjct: 402 LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY 461
Query: 548 SADATTTELLIN 559
+D E +++
Sbjct: 462 PSDVEVYEYIVD 473
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 173/425 (40%), Gaps = 44/425 (10%)
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
G+ D ++++++ L R VL M G+ PD+ LT ++ V +A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
+ L + G +C++ + A++ LC+ + SAA F +G FD Y ++
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKG-NIPFDSCSYNIMISG 264
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPD 270
K G V E + EM G PD ++Y+ L GL R + KG +PD
Sbjct: 265 WSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPD 324
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
+ ++A++ N+ + R M EPN+ TY+ L++ ++ DA+++++
Sbjct: 325 ANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE 384
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
M+ +G LP+T +V L P C G
Sbjct: 385 EMLSRGVLPTT------------------------GLVTSFLKP-----------LCSYG 409
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
P AA + +K G Y ++L L + ++++ E+++ + +Y
Sbjct: 410 PPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYE 469
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
++DGLC G L++A KG + F Y+ + L + A +L + +++
Sbjct: 470 YIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKA 529
Query: 511 GCPPN 515
N
Sbjct: 530 RATEN 534
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 163/406 (40%), Gaps = 43/406 (10%)
Query: 37 RRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMH 96
RR+L S M +D M P+++ T+ ++ V++ + AI L +
Sbjct: 163 RRKLFSFM---------MDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESE 213
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEP-DIVTLTTIVNGLCAEGNV 155
S G++ + +F ++ CLC S V K G P D + +++G G V
Sbjct: 214 SFGVKCSTESFNALLRCLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 156 EQALGLAMRMDEMGY--RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
E+ + M E G+ C SY+H +I GL + G + ++ F ++ +G D VY
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSH--LIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYN 329
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT 273
A++ + +E++ + M + +P++ TY+ L GL +G+ + +
Sbjct: 330 AMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLI---KGRKVSDAL----EI 382
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
F E M++R GV P S + C AM +Y
Sbjct: 383 F---------EEMLSR-----------GVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSR 422
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPL 393
GC S Y L+ + K +++ EM G D+ + +V G C G
Sbjct: 423 KAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLE 482
Query: 394 AAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
A ++ + G P+R Y+ + L + A L+ +++K
Sbjct: 483 NAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKK 528
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 94/182 (51%), Gaps = 9/182 (4%)
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK---------GIM 268
SLC+ G V+EA L E+T K PD TYN L + L C V+ + +
Sbjct: 168 SLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVK 227
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
PD+ +F+ ++DN C + A L+ + G +P+ F YN+++ C + +A+ V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
Y M +G P +TYNTLI G K ++++A L MV+ G PD T+ +L+ G C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 389 AG 390
G
Sbjct: 348 KG 349
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 106 TFTIVINCLCRLSRTDLGFC--VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
TF I+++ CR + + VL LM GLEPD VT V LC G V++A L
Sbjct: 124 TFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMK 183
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKV-EGRGFKFDVPVYTAIMDSLCKD 222
+ E ++YT+ ++ LCK + + ++ + K D+ +T ++D++C
Sbjct: 184 ELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 223 GLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTF 274
+ EA+ L S++ G +PD YN + +G S+G K+ ++G+ PD T+
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC 317
+ ++ K G + A + M G EP+ TY SL+N C
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMC 346
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 10/288 (3%)
Query: 280 NYCKEGMIARAERLMGFMARVGVEP-NVFTYNSLINAHCLQDQMQDAMKVYDSMI--YKG 336
N K ++ A+ L +A P ++ +NS++ ++ + D +K++ ++
Sbjct: 58 NPFKSPNLSDAKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPN 117
Query: 337 CLPSTVTYNTLIHGWCKI--KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
P T+ L+ C+ + +L MVN GL PD T + V C+ G
Sbjct: 118 FRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDE 177
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKC---HFYPEAVSLYRELEKMNLDRHITIYSI 451
AK+L+ + + PD TY +L L KC H E V R+ ++ + ++I
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRD--DFDVKPDLVSFTI 235
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
++D +C+ L++A S L G K D F Y +++G C +A + M+E+G
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEG 295
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
P+ TYN + GL + G + + YL+ M G+ D T L+N
Sbjct: 296 VEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMN 343
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 110/230 (47%), Gaps = 3/230 (1%)
Query: 269 PDVHTFSAIVDNYCK--EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
P TF ++ + C+ + I+ R++ M G+EP+ T + + + C ++ +A
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGG 385
+ + K P T TYN L+ CK K + + EM + + PD+ ++ L+
Sbjct: 180 DLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDN 239
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
C + A L+S + G PD Y I+ G EAV +Y+++++ ++
Sbjct: 240 VCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPD 299
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
Y+ ++ GL GR+++AR + + G + D TYT ++ G+CR+G
Sbjct: 300 QITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+ + +V + M+ G P VT + + C+ ++D+A L+ E+ K PD T+N
Sbjct: 139 SISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYN 198
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQL-PDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
L+ CK E + M+ + PD +++ I++D + EA+ L +L
Sbjct: 199 FLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGN 258
Query: 440 MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDD 499
+Y+ ++ G C+ + +A + ++ +G++ D TY ++ GL + G +++
Sbjct: 259 AGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEE 318
Query: 500 AEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
A L M + G P+ TY + G+ R+G
Sbjct: 319 ARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 3/174 (1%)
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFK-MGLEPDIVTLTTIV 146
A L+K + D++T+ ++ LC+ + + + M ++PD+V+ T ++
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 147 NGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFK 206
+ +C N+ +A+ L ++ G++ + + + I+ G C + S A+G +KK++ G +
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 207 FDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG 260
D Y ++ L K G V EA M G +PD TY L G+ C +G
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGM--CRKG 349
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 67/122 (54%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P++ FT+LI+ V K+ A+ LV ++ + G + D F + ++ C LS+ V
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
M + G+EPD +T T++ GL G VE+A M + GY ++ T+ +++NG+C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 187 VG 188
G
Sbjct: 348 KG 349
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 146/332 (43%), Gaps = 9/332 (2%)
Query: 189 NTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN 248
N S A+ ++ + K +V + +I+ L K+G ++ + L+ +M G++PDVVTYN
Sbjct: 146 NVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYN 205
Query: 249 CLTRGLFHCSRG---------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR 299
L G G ++ GI D + ++ G AE + M
Sbjct: 206 TLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKV 265
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK 359
G PN++ Y+SL+N++ + + A ++ M G +P+ V TL+ + K D+
Sbjct: 266 EGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDR 325
Query: 360 AMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD 419
+ LL E+ + G + + L+ G KAG A+ + M+ G D +I++
Sbjct: 326 SRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMIS 385
Query: 420 GLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI 479
L + + EA L R+ E + + + ML C G ++ + + +
Sbjct: 386 ALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSP 445
Query: 480 DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
D T+ I+++ +E L A Q +DM KG
Sbjct: 446 DYNTFHILIKYFIKEKLHLLAYQTTLDMHSKG 477
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/493 (20%), Positives = 206/493 (41%), Gaps = 51/493 (10%)
Query: 80 VKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDI 139
V K+ + A+ + + + + + + +++CL + + D + M + GL+PD+
Sbjct: 142 VGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDV 201
Query: 140 VTLTTIVNG-LCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
VT T++ G + + +A+ L + G + +S +G ++ G + A + +
Sbjct: 202 VTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQ 261
Query: 199 KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR-----G 253
+++ G ++ Y+++++S G +A L +EM G+ P+ V L + G
Sbjct: 262 QMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGG 321
Query: 254 LFHCSR---GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
LF SR ++ G + + ++D K G + A + M GV + + +
Sbjct: 322 LFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANS 381
Query: 311 SLINAHCLQDQMQDAMKVY--DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
+I+A C + ++A ++ Y+ C V NT++ +C+ +M+ M ++ +M
Sbjct: 382 IMISALCRSKRFKEAKELSRDSETTYEKC--DLVMLNTMLCAYCRAGEMESVMRMMKKMD 439
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
+ ++PD T++ L+ F K + L A + M G + + ++ L K
Sbjct: 440 EQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQA 499
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
EA S+Y L YS R L K L I++
Sbjct: 500 EAFSVYNMLR----------YS--------------KRTICKELHEKILH-------ILI 528
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
QG LL DA ++ D + P T F + + G+I+ L+++ G G
Sbjct: 529 QG----NLLKDAYIVVKDNAKMISQP---TLKKFGRAFMISGNINLVNDVLKVLHGSGHK 581
Query: 549 ADATTTELLINFF 561
D E+ I+ +
Sbjct: 582 IDQVQFEIAISRY 594
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 137/324 (42%), Gaps = 11/324 (3%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKH-YTTAISLVKRMHSLGIEADSFTFT 108
+D+ + F++M P++ + L+ +K+K+ Y AI L+ + GI+ DS +
Sbjct: 182 LDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYG 241
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
V+ R++ + M G P+I ++++N +G+ ++A L M +
Sbjct: 242 TVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSI 301
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G N ++ K G + ++E G+ + Y +MD L K G + EA
Sbjct: 302 GLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT---------FSAIVD 279
++ +M GKG++ D + + L R K K+ + D T + ++
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE-LSRDSETTYEKCDLVMLNTMLC 420
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
YC+ G + R+M M V P+ T++ LI + A + M KG
Sbjct: 421 AYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRL 480
Query: 340 STVTYNTLIHGWCKIKKMDKAMSL 363
++LI+ KI+ +A S+
Sbjct: 481 EEELCSSLIYHLGKIRAQAEAFSV 504
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 155/326 (47%), Gaps = 31/326 (9%)
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD-- 243
K+G + AA F K E GF + Y +++LCK ++ A + +M G+ +
Sbjct: 243 KLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGE 302
Query: 244 ----VVTYNCL------TRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCK-EGMIARAER 292
++T+ C ++ ++ K +K + P + ++ CK +G I A+
Sbjct: 303 QMGNIITWFCKEGKAEEAYSVYELAKTK--EKSLPP--RFVATLITALCKNDGTITFAQE 358
Query: 293 LMGFMA----RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
++G ++ R G++P ++ +I++ C ++DA + MI KG P +N ++
Sbjct: 359 MLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
H K +D+A +L M ++GL PD+ T+ ++ G+ K GM A+E+++ +K +
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKK 474
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG-RLKDARE 467
+TY ++ G K Y EA+ L E+++ + + Y+ ++ C + A
Sbjct: 475 LSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEV 534
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCR 493
F ++ KGL ++ + QGL R
Sbjct: 535 LFEEMKQKGLHLNAIS-----QGLIR 555
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 146/336 (43%), Gaps = 23/336 (6%)
Query: 68 NIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVL 127
N++ LI L K+ A + + G ++ T+ + + LC+ S D V
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 128 GLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKV 187
M K G+ + + I+ C EG E+A + +I LCK
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKN 349
Query: 188 -GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
G + A + G + + ++ ++ SLC+ V +A L +M KG P
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAV 409
Query: 247 YNCLTRGLFHCSR-------GKVLK----KGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
+N + CS+ +VLK +G+ PDV+T++ I+ Y K GM+ A+ ++
Sbjct: 410 FNLVVHA---CSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILA 466
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
+ + + TY++LI +C ++ +A+K+ + M G P+ YN LI +C +K
Sbjct: 467 EAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFC-LK 525
Query: 356 KMD--KAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
+D KA L EM KGL NA+ G +A
Sbjct: 526 ALDWEKAEVLFEEMKQKGL-----HLNAISQGLIRA 556
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 120/264 (45%), Gaps = 5/264 (1%)
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
G PN TY + A C + M A V + M+ G L +I +CK K ++A
Sbjct: 261 GFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEA 320
Query: 361 MSL--LGEMVNKGLTPDICTWNALVGGFCKA-GMPLAAKELISTMQKHGQLPDRITYAII 417
S+ L + K L P L+ CK G A+E++ + + ++ +
Sbjct: 321 YSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEARRRGIKPFSDV 378
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
+ L + +A +L ++ ++++++ G L +A+E ++++GL
Sbjct: 379 IHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGL 438
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
K DV+TYT+++ G + G++D+A+++L + ++K + TY+ ++G + + + K
Sbjct: 439 KPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALK 498
Query: 538 YLQLMKGKGFSADATTTELLINFF 561
L M G +A LI F
Sbjct: 499 LLNEMDRFGVQPNADEYNKLIQSF 522
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 69 IKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLG 128
IK F+ +I+ + +M++ A +L+ M S G + F +V++ + D VL
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLK 431
Query: 129 LMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVG 188
LM GL+PD+ T T I++G G +++A + + + + T+ A+I G CK+
Sbjct: 432 LMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIE 491
Query: 189 NTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE-ALGLWSEMTGKGIQPDVVTY 247
A+ +++ G + + Y ++ S C L E A L+ EM KG+
Sbjct: 492 EYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLH-----L 546
Query: 248 NCLTRGLFHC-----SRGKVLKKG 266
N +++GL S KV + G
Sbjct: 547 NAISQGLIRAVKEMESEAKVTEDG 570
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 95/219 (43%), Gaps = 1/219 (0%)
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
N LI + K+ K A + + G TP+ T+ + CK A + M K
Sbjct: 235 NELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLK 294
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSY-GRLK 463
G L + I+ K EA S+Y + + ++ LC G +
Sbjct: 295 SGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTIT 354
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
A+E L + + + ++ ++ LCR + DA+ LL+DM KG P + +NL V
Sbjct: 355 FAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVV 414
Query: 524 QGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ GD+ +++ L+LM+ +G D T ++I+ ++
Sbjct: 415 HACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYA 453
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 4/170 (2%)
Query: 41 LSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGI 100
L MR++K A M + P P F ++++ K A ++K M S G+
Sbjct: 382 LCRMRNVKDAKA---LLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGL 438
Query: 101 EADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALG 160
+ D +T+T++I+ + D +L K + VT ++ G C ++AL
Sbjct: 439 KPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALK 498
Query: 161 LAMRMDEMGYRCNSYTHGAIINGLC-KVGNTSAAIGYFKKVEGRGFKFDV 209
L MD G + N+ + +I C K + A F++++ +G +
Sbjct: 499 LLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNA 548
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 23/272 (8%)
Query: 140 VTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKK 199
++T ++ L EG V++AL RM E + + Y + IIN LC+VGN A +
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 200 VEGRGFKF--DVPVYTAIMDSLCKDGLVNEALGLWSEMTG--KGIQPDVVTYNCLTRGLF 255
++ GF++ D YT ++ S C+ G+ TG K I+ + N + R
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYGM----------QTGCRKAIRRRMWEANRMFR--- 272
Query: 256 HCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
++L +G +PDV T++ ++D CK I RA L M G PN TYNS I
Sbjct: 273 -----EMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRY 327
Query: 316 HCLQDQMQDAMKVYDSMIYKGC-LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP 374
+ + ++++ A+++ +M G +P + TY LIH + ++ +A L+ EMV GL P
Sbjct: 328 YSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVP 387
Query: 375 DICTWNALVGGFCKAGMPLAAKELISTMQKHG 406
T+ + G+ E + + G
Sbjct: 388 REYTYKLVCDALSSEGLASTLDEELHKRMREG 419
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 41/262 (15%)
Query: 213 TAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVH 272
T +M L ++G V EAL + M +HC PDV+
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKE-----------------YHCK----------PDVY 201
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVE--PNVFTYNSLINAHC-----------LQ 319
++ I++ C+ G +A L+ M G P+ +TY LI+++C ++
Sbjct: 202 AYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIR 261
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
+M +A +++ M+++G +P VTYN LI G CK ++ +A+ L +M KG P+ T+
Sbjct: 262 RRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTY 321
Query: 380 NALVGGFCKAGMPLAAKELISTMQKHGQ-LPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
N+ + + A E++ TM+K G +P TY ++ L + EA L E+
Sbjct: 322 NSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMV 381
Query: 439 KMNLDRHITIYSIMLDGLCSYG 460
+ L Y ++ D L S G
Sbjct: 382 EAGLVPREYTYKLVCDALSSEG 403
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 47/261 (18%)
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL--PS 340
+EG + A M +P+V+ YN++INA C + A + D M G P
Sbjct: 177 EEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPD 236
Query: 341 TVTYNTLIHGWCKI-----------KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
T TY LI +C+ ++M +A + EM+ +G PD+ T+N L+ G CK
Sbjct: 237 TYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKT 296
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
A EL M+ G +P+++TY + I Y
Sbjct: 297 NRIGRALELFEDMKTKGCVPNQVTY----------------------------NSFIRYY 328
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
S+ + + ++ ++ G+ TYT ++ L +A L+++M E
Sbjct: 329 SVTNEIEGAIEMMRTMKKLGHGVPGSS------TYTPLIHALVETRRAAEARDLVVEMVE 382
Query: 510 KGCPPNDCTYNLFVQGLLRRG 530
G P + TY L L G
Sbjct: 383 AGLVPREYTYKLVCDALSSEG 403
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 106 TFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
+ T ++ CL M + +PD+ TI+N LC GN ++A L +M
Sbjct: 167 SITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQM 226
Query: 166 DEMGYR--CNSYTHGAIINGLCKVGNTSA-----------AIGYFKKVEGRGFKFDVPVY 212
G+R ++YT+ +I+ C+ G + A F+++ RGF DV Y
Sbjct: 227 QLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTY 286
Query: 213 TAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR---------GLFHCSRG-KV 262
++D CK + AL L+ +M KG P+ VTYN R G R K
Sbjct: 287 NCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKK 346
Query: 263 LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
L G+ P T++ ++ + A A L+ M G+ P +TY + +A
Sbjct: 347 LGHGV-PGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 46/223 (20%)
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+ +A++ M PD+ +N ++ C+ G A+ L+ MQ
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQ------------- 227
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG-----------RLKDA 465
L G + P+ + Y+I++ C YG R+ +A
Sbjct: 228 -LPGF---RYPPDTYT----------------YTILISSYCRYGMQTGCRKAIRRRMWEA 267
Query: 466 REFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQG 525
F + +G DV TY ++ G C+ + A +L DM+ KGC PN TYN F++
Sbjct: 268 NRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRY 327
Query: 526 LLRRGDISRSEKYLQLMK--GKGFSADATTTELLINFFSGNKA 566
+I + + ++ MK G G +T T L+ +A
Sbjct: 328 YSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRA 370
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI--DVFT 483
F EA++ + +++ + + Y+ +++ LC G K AR +Q G + D +T
Sbjct: 180 FVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYT 239
Query: 484 YTIMVQGLCREGL-----------LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
YTI++ CR G+ + +A ++ +M +G P+ TYN + G + I
Sbjct: 240 YTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRI 299
Query: 533 SRSEKYLQLMKGKGFSADATTTELLINFFS 562
R+ + + MK KG + T I ++S
Sbjct: 300 GRALELFEDMKTKGCVPNQVTYNSFIRYYS 329
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 18/221 (8%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIE--ADSFTF 107
V A+ F +M + P++ + +IN + ++ ++ A L+ +M G D++T+
Sbjct: 181 VKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTY 240
Query: 108 TIVINCLCRLS-RTDLGFCVLGLMFKM----------GLEPDIVTLTTIVNGLCAEGNVE 156
TI+I+ CR +T + M++ G PD+VT +++G C +
Sbjct: 241 TILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIG 300
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP---VYT 213
+AL L M G N T+ + I AI + ++ G VP YT
Sbjct: 301 RALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG--HGVPGSSTYT 358
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
++ +L + EA L EM G+ P TY + L
Sbjct: 359 PLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 166/373 (44%), Gaps = 19/373 (5%)
Query: 53 AVDFFNKMAAINPFPNIKE-FTVLINLVVKMKHYTTAISLVKRM-HSLGIEADSFTFTIV 110
A++FFN + + F + E F +I+++ K + + +L+ RM + + TF IV
Sbjct: 64 ALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIV 123
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG- 169
+ L D + +V+ LC +V +A L + +G
Sbjct: 124 FKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCEHKHVVEAEELCFGKNVIGN 182
Query: 170 --YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
N+ H I+ G K+G Y+KK++ G D+ Y+ MD +CK G +
Sbjct: 183 GFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWK 242
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG---------KVLKKGIMPDVHTFSAIV 278
A+ L+ EM + ++ DVV YN + R + S+G ++ ++G P+V T + I+
Sbjct: 243 AVKLYKEMKSRRMKLDVVAYNTVIRAI-GASQGVEFGIRVFREMRERGCEPNVATHNTII 301
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
C++G + A R++ M + G +P+ TY L + ++ + + ++ MI G
Sbjct: 302 KLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSR---LEKPSEILSLFGRMIRSGVR 358
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P TY L+ + + + + + M G TPD +NA++ + GM A+E
Sbjct: 359 PKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREY 418
Query: 399 ISTMQKHGQLPDR 411
M + G P R
Sbjct: 419 EEEMIERGLSPRR 431
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 158/383 (41%), Gaps = 35/383 (9%)
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF-KMGLEPDIVTLTTIVNGLCAEGNVEQ 157
G + TF VI+ L + ++ + ++ M P+ VT + V++
Sbjct: 76 GFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQE 135
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA--IGYFKKVEGRGFKF-DVPVYTA 214
A+ ++D+ R + + +++ LC+ + A + + K V G GF + ++
Sbjct: 136 AIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNL 194
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTF 274
I+ K G + W +M +G+ D+ +Y
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSY--------------------------- 227
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
S +D CK G +A +L M ++ +V YN++I A ++ ++V+ M
Sbjct: 228 SIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRE 287
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
+GC P+ T+NT+I C+ +M A +L EM +G PD T+ L F + P
Sbjct: 288 RGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSE 344
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
L M + G P TY +++ + F + +++ +++ Y+ ++D
Sbjct: 345 ILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVID 404
Query: 455 GLCSYGRLKDAREFFSGLQAKGL 477
L G L ARE+ + +GL
Sbjct: 405 ALIQKGMLDMAREYEEEMIERGL 427
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 134/306 (43%), Gaps = 25/306 (8%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V A+D ++K+ N + F L++ + + KH A L + +G S + T
Sbjct: 133 VQEAIDAYDKLDDFN-LRDETSFYNLVDALCEHKHVVEAEELCFGKNVIG-NGFSVSNTK 190
Query: 110 VINCLCRLSRTDLGFCVLGLMFK----------MGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ N + R G+ LG K G+ D+ + + ++ +C G +A+
Sbjct: 191 IHNLILR------GWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAV 244
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M + + + +I + I F+++ RG + +V + I+ L
Sbjct: 245 KLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLL 304
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR-----GKVLKKGIMPDVHTF 274
C+DG + +A + EM +G QPD +TY CL L S G++++ G+ P + T+
Sbjct: 305 CEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTY 364
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY-DSMI 333
++ + + G + + M G P+ YN++I+A +Q M D + Y + MI
Sbjct: 365 VMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDA-LIQKGMLDMAREYEEEMI 423
Query: 334 YKGCLP 339
+G P
Sbjct: 424 ERGLSP 429
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/379 (20%), Positives = 155/379 (40%), Gaps = 19/379 (5%)
Query: 150 CAEGNVEQALGLAMRMD-EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD 208
C + ++AL ++ E G+R + T +I+ L K + ++ G
Sbjct: 56 CYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTE--S 113
Query: 209 VP---VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH--------- 256
VP + + LV EA+ + ++ ++ + YN + H
Sbjct: 114 VPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEEL 173
Query: 257 CSRGKVLKKGI-MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
C V+ G + + + I+ + K G + + M GV ++F+Y+ ++
Sbjct: 174 CFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDI 233
Query: 316 HCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
C + A+K+Y M + V YNT+I + ++ + + EM +G P+
Sbjct: 234 MCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPN 293
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
+ T N ++ C+ G A ++ M K G PD ITY + L K E +SL+
Sbjct: 294 VATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKP---SEILSLFG 350
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
+ + + + Y +++ +G L+ + ++ G D Y ++ L ++G
Sbjct: 351 RMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKG 410
Query: 496 LLDDAEQLLMDMEEKGCPP 514
+LD A + +M E+G P
Sbjct: 411 MLDMAREYEEEMIERGLSP 429
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 123/276 (44%), Gaps = 11/276 (3%)
Query: 264 KKGIMPDVHTFSAIVDNYCK----EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQ 319
+ G TF+ ++D K E A R++G V PN T+ + +
Sbjct: 74 ESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESV---PNHVTFRIVFKRYVTA 130
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL-LGEMV--NKGLTPDI 376
+Q+A+ YD + T YN L+ C+ K + +A L G+ V N +
Sbjct: 131 HLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNT 189
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
N ++ G+ K G KE M G D +Y+I +D + K +AV LY+E
Sbjct: 190 KIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKE 249
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
++ + + Y+ ++ + + ++ F ++ +G + +V T+ +++ LC +G
Sbjct: 250 MKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGR 309
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
+ DA ++L +M ++GC P+ TY L + +I
Sbjct: 310 MRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI 345
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 103/219 (47%), Gaps = 4/219 (1%)
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
+P+ VT+ + + + +A+ ++ + L + +N LV C+ + A+E
Sbjct: 114 VPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEE 172
Query: 398 LISTMQKHGQ---LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
L G + + + +IL G K ++ + +++++ + + + YSI +D
Sbjct: 173 LCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMD 232
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
+C G+ A + + ++++ +K+DV Y +++ + ++ ++ +M E+GC P
Sbjct: 233 IMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEP 292
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
N T+N ++ L G + + + L M +G D+ T
Sbjct: 293 NVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSIT 331
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 143/292 (48%), Gaps = 6/292 (2%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
K G P+V +++A++++Y + G AE + M G EP+ TY ++ D+ +
Sbjct: 174 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 233
Query: 324 DAMKVYDSMI--YKGCL-PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+A +V+++++ K L P Y+ +I+ + K +KA + MV KG+ T+N
Sbjct: 234 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 293
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
+L+ F + ++ ++ MQ+ PD ++YA+++ + EA+S++ E+
Sbjct: 294 SLMS-FETSYKEVS--KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 350
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ Y+I+LD G ++ A+ F ++ + D+++YT M+ ++ A
Sbjct: 351 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 410
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
E+ ++ G PN TY ++G + D+ + + + M+ G A+ T
Sbjct: 411 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQT 462
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 154/372 (41%), Gaps = 12/372 (3%)
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
F ++I +L + VL ++ KMG P++++ T ++ G A + RM
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKV---EGRGFKFDVPVYTAIMDSLCKDG 223
G ++ T+ I+ + A F+ + + K D +Y ++ K G
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK-------KGIMPDVHTFSA 276
+A ++S M GKG+ VTYN L F S +V K I PDV +++
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSYKEVSKIYDQMQRSDIQPDVVSYAL 326
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
++ Y + A + M GV P YN L++A + ++ A V+ SM
Sbjct: 327 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 386
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
P +Y T++ + M+ A + G P+I T+ L+ G+ KA
Sbjct: 387 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 446
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
E+ M+ G ++ I+D +C + A+ Y+E+E + +++L
Sbjct: 447 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLA 506
Query: 457 CSYGRLKDAREF 468
+ L++A+E
Sbjct: 507 STQDELEEAKEL 518
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 154/383 (40%), Gaps = 27/383 (7%)
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
+I K+GN + A + G +V YTA+M+S + G N A ++ M G
Sbjct: 152 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 211
Query: 240 IQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR 299
+P +TY + + + K + F ++D +
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAE-------EVFETLLDE-----------------KK 247
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK 359
++P+ Y+ +I + + A KV+ SM+ KG STVTYN+L+ K++ K
Sbjct: 248 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK 307
Query: 360 AMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD 419
+ +M + PD+ ++ L+ + +A A + M G P Y I+LD
Sbjct: 308 ---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLD 364
Query: 420 GLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI 479
+A ++++ + + + + Y+ ML + ++ A +FF ++ G +
Sbjct: 365 AFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 424
Query: 480 DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYL 539
++ TY +++G + ++ ++ M G N + R + + +
Sbjct: 425 NIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWY 484
Query: 540 QLMKGKGFSADATTTELLINFFS 562
+ M+ G D +L++ S
Sbjct: 485 KEMESCGVPPDQKAKNVLLSLAS 507
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%)
Query: 57 FNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCR 116
+++M + P++ + +LI + + A+S+ + M G+ + I+++
Sbjct: 309 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 368
Query: 117 LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
+ V M + + PD+ + TT+++ ++E A R+ G+ N T
Sbjct: 369 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 428
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
+G +I G K + + ++K+ G K + + T IMD+ + ALG + EM
Sbjct: 429 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEME 488
Query: 237 GKGIQPDVVTYNCL 250
G+ PD N L
Sbjct: 489 SCGVPPDQKAKNVL 502
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 9/207 (4%)
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
S + + LI + K+ + A +L + G TP++ ++ AL+ + + G A+ +
Sbjct: 145 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 204
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL---EKMNLDRHITIYSIMLDGL 456
MQ G P ITY IIL + + EA ++ L +K L +Y +M+
Sbjct: 205 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
G + AR+ FS + KG+ TY + + E + ++ M+ P+
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDV 321
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMK 543
+Y L ++ G R E+ L + +
Sbjct: 322 VSYALLIKAY---GRARREEEALSVFE 345
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 143/292 (48%), Gaps = 6/292 (2%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
K G P+V +++A++++Y + G AE + M G EP+ TY ++ D+ +
Sbjct: 167 KMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFK 226
Query: 324 DAMKVYDSMI--YKGCL-PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
+A +V+++++ K L P Y+ +I+ + K +KA + MV KG+ T+N
Sbjct: 227 EAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYN 286
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
+L+ F + ++ ++ MQ+ PD ++YA+++ + EA+S++ E+
Sbjct: 287 SLMS-FETSYKEVS--KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA 343
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ Y+I+LD G ++ A+ F ++ + D+++YT M+ ++ A
Sbjct: 344 GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGA 403
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
E+ ++ G PN TY ++G + D+ + + + M+ G A+ T
Sbjct: 404 EKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQT 455
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 154/372 (41%), Gaps = 12/372 (3%)
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMD 166
F ++I +L + VL ++ KMG P++++ T ++ G A + RM
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 167 EMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKV---EGRGFKFDVPVYTAIMDSLCKDG 223
G ++ T+ I+ + A F+ + + K D +Y ++ K G
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 224 LVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK-------KGIMPDVHTFSA 276
+A ++S M GKG+ VTYN L F S +V K I PDV +++
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSYKEVSKIYDQMQRSDIQPDVVSYAL 319
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
++ Y + A + M GV P YN L++A + ++ A V+ SM
Sbjct: 320 LIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
Query: 337 CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAK 396
P +Y T++ + M+ A + G P+I T+ L+ G+ KA
Sbjct: 380 IFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMM 439
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
E+ M+ G ++ I+D +C + A+ Y+E+E + +++L
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLA 499
Query: 457 CSYGRLKDAREF 468
+ L++A+E
Sbjct: 500 STQDELEEAKEL 511
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 154/383 (40%), Gaps = 27/383 (7%)
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
+I K+GN + A + G +V YTA+M+S + G N A ++ M G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 240 IQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR 299
+P +TY + + + K + F ++D +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAE-------EVFETLLDE-----------------KK 240
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK 359
++P+ Y+ +I + + A KV+ SM+ KG STVTYN+L+ K++ K
Sbjct: 241 SPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSK 300
Query: 360 AMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD 419
+ +M + PD+ ++ L+ + +A A + M G P Y I+LD
Sbjct: 301 ---IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLD 357
Query: 420 GLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI 479
+A ++++ + + + + Y+ ML + ++ A +FF ++ G +
Sbjct: 358 AFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEP 417
Query: 480 DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYL 539
++ TY +++G + ++ ++ M G N + R + + +
Sbjct: 418 NIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWY 477
Query: 540 QLMKGKGFSADATTTELLINFFS 562
+ M+ G D +L++ S
Sbjct: 478 KEMESCGVPPDQKAKNVLLSLAS 500
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%)
Query: 57 FNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCR 116
+++M + P++ + +LI + + A+S+ + M G+ + I+++
Sbjct: 302 YDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAI 361
Query: 117 LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
+ V M + + PD+ + TT+++ ++E A R+ G+ N T
Sbjct: 362 SGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVT 421
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
+G +I G K + + ++K+ G K + + T IMD+ + ALG + EM
Sbjct: 422 YGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEME 481
Query: 237 GKGIQPDVVTYNCL 250
G+ PD N L
Sbjct: 482 SCGVPPDQKAKNVL 495
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 9/207 (4%)
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
S + + LI + K+ + A +L + G TP++ ++ AL+ + + G A+ +
Sbjct: 138 SEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIF 197
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL---EKMNLDRHITIYSIMLDGL 456
MQ G P ITY IIL + + EA ++ L +K L +Y +M+
Sbjct: 198 RRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
G + AR+ FS + KG+ TY + + E + ++ M+ P+
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKIYDQMQRSDIQPDV 314
Query: 517 CTYNLFVQGLLRRGDISRSEKYLQLMK 543
+Y L ++ G R E+ L + +
Sbjct: 315 VSYALLIKAY---GRARREEEALSVFE 338
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 175/393 (44%), Gaps = 39/393 (9%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLA 162
D + ++I L + ++ +C++ MF + + + +++ A + QA+
Sbjct: 154 DQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTR-KAMFLMMDRYAAANDTSQAIRTF 212
Query: 163 MRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKD 222
MD+ + ++ LC+ G+ A F + F DV + I++ C
Sbjct: 213 DIMDKFKHTPYDEAFQGLLCALCRHGHIEKA-EEFMLASKKLFPVDVEGFNVILNGWCNI 271
Query: 223 GL-VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNY 281
V EA +W EM +C I P+ ++S ++ +
Sbjct: 272 WTDVTEAKRIWREMGN------------------YC---------ITPNKDSYSHMISCF 304
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
K G + + RL M + G+ P + YNSL+ +D +AMK+ + +G P +
Sbjct: 305 SKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDS 364
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
VTYN++I C+ K+D A ++L M+++ L+P + T++A F +A E++
Sbjct: 365 VTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHA----FLEAVNFEKTLEVLGQ 420
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
M+ P T+ +IL LFK A+ ++ E+++ + + +Y + GL S G
Sbjct: 421 MKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGW 480
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
L+ ARE +S +++KG F M+Q L E
Sbjct: 481 LEKAREIYSEMKSKG-----FVGNPMLQKLLEE 508
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 128/295 (43%), Gaps = 41/295 (13%)
Query: 265 KGIMP-DVHTFSAIVDNYCKEGM-IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
K + P DV F+ I++ +C + A+R+ M + PN +Y+ +I+ +
Sbjct: 251 KKLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNL 310
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
D++++YD M +G P YN+L++ + D+AM L+ ++ +GL PD T+N++
Sbjct: 311 FDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSM 370
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
+ C+AG A+ +++TM P T+ H + EAV+ + LE +
Sbjct: 371 IRPLCEAGKLDVARNVLATMISENLSPTVDTF----------HAFLEAVNFEKTLEVL-- 418
Query: 443 DRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQ 502
G L E T+ +++ L + ++A +
Sbjct: 419 ------------GQMKISDLGPTEE---------------TFLLILGKLFKGKQPENALK 451
Query: 503 LLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
+ +M+ N Y +QGLL G + ++ + MK KGF + +LL
Sbjct: 452 IWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNPMLQKLL 506
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 114/260 (43%), Gaps = 15/260 (5%)
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
+++ + + A++ +D M P + L+ C+ ++KA + + +K
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKK 252
Query: 372 LTP-DICTWNALVGGFCKAGMPLA-AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
L P D+ +N ++ G+C + AK + M + P++ +Y+ ++ K +
Sbjct: 253 LFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFD 312
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
++ LY E++K L I +Y+ ++ L +A + L +GLK D TY M++
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ-----------GLLRRGDISRSEKY 538
LC G LD A +L M + P T++ F++ G ++ D+ +E+
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEET 432
Query: 539 LQLMKGKGFSADATTTELLI 558
L+ GK F L I
Sbjct: 433 FLLILGKLFKGKQPENALKI 452
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
++ +++M P I+ + L+ ++ + + A+ L+K+++ G++ DS T+ +I
Sbjct: 313 SLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIR 372
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
LC + D+ VL M L P + T + + E +E LG M++ ++G
Sbjct: 373 PLCEAGKLDVARNVLATMISENLSPTVDTFHAFLEAVNFEKTLE-VLG-QMKISDLG--P 428
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
T I+ L K A+ + +++ + +Y A + L G + +A ++
Sbjct: 429 TEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIY 488
Query: 233 SEMTGKGI 240
SEM KG
Sbjct: 489 SEMKSKGF 496
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 106/470 (22%), Positives = 197/470 (41%), Gaps = 52/470 (11%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M K G+EP VT++T ++ G VE+ G ++ +++N CKVG
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVG- 323
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
I Y + V R F+ DV + I+ + GLV +A+ + M + ++ D VT
Sbjct: 324 ---LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLAT 380
Query: 250 LTRGLFHCSRGKV--------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
L K+ ++ D+ S ++D Y K G I A+++
Sbjct: 381 LMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST---- 436
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
VE ++ +N+L+ A+ +A++++ M +G P+ +T+N +I + ++D+A
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG- 420
+ +M + G+ P++ +W ++ G + G A + MQ+ G P+ + + L
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 421 --LFKCHF-------------YPEAVSLYRELEKM----------------NLDRHITIY 449
L H + VS+ L M L + +
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLS 616
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM-E 508
+ M+ YG LK+A + L+ GLK D T T ++ G ++ A ++ D+
Sbjct: 617 NAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVS 676
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
++ P Y L V L G+ +EK L+L++ F DA + L+
Sbjct: 677 KRSMKPCLEHYGLMVDLLASAGE---TEKALRLIEEMPFKPDARMIQSLV 723
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 196/498 (39%), Gaps = 104/498 (20%)
Query: 146 VNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIING----------------LCKVGN 189
V+ LC G +++AL L MD R +G I+ G + K G+
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 190 TSAAIGY---------------------FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
A Y F K+ R +V + AI+ C+ GL A
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVR----NVFSWAAIIGVKCRIGLCEGA 157
Query: 229 LGLWSEMTGKGIQPD--VVTYNCLTRGLFHCSR------GKVLKKGIMPDVHTFSAIVDN 280
L + EM I PD VV C G SR G V+K G+ V S++ D
Sbjct: 158 LMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADM 217
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
Y K G++ A ++ + + N +N+L+ + + ++A++++ M +G P+
Sbjct: 218 YGKCGVLDDASKVFDEIP----DRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPT 273
Query: 341 TVTYNT-----------------------------------LIHGWCKIKKMDKAMSLLG 365
VT +T L++ +CK+ ++ A +
Sbjct: 274 RVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFD 333
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
M K D+ TWN ++ G+ + G+ A + M+ D +T A ++ +
Sbjct: 334 RMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR-- 387
Query: 426 FYPEAVSLYRELE----KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
E + L +E++ + + + I + S ++D G + DA++ F K D+
Sbjct: 388 --TENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DL 441
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQL 541
+ ++ GL +A +L M+ +G PPN T+NL + LLR G + ++
Sbjct: 442 ILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQ 501
Query: 542 MKGKGFSADATTTELLIN 559
M+ G + + ++N
Sbjct: 502 MQSSGIIPNLISWTTMMN 519
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 145/313 (46%), Gaps = 31/313 (9%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
+LS +R+ VD A D F +M + PN+ +T ++N +V+ AI +++M G
Sbjct: 483 ILSLLRN-GQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTL-TTIVNGLCAEGNVEQA 158
+ ++F+ T+ ++ L+ +G + G + + +V++ T++V+ G++ +A
Sbjct: 542 LRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA 601
Query: 159 LGLAMRMDEMGYRCNSYTH----GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
E + Y+ A+I+ GN AI ++ +EG G K D T
Sbjct: 602 --------EKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITN 653
Query: 215 IMDSLCKDGLVNEALGLWSEMTGK-GIQPDVVTYNCLTRGLFHCSRGKVLKK-------G 266
++ + G +N+A+ +++++ K ++P + Y + L S G+ K
Sbjct: 654 VLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLL--ASAGETEKALRLIEEMP 711
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR--VGVEP-NVFTYNSLINAHCLQDQMQ 323
PD ++V + K+ R L+ +++R + EP N Y ++ NA+ ++
Sbjct: 712 FKPDARMIQSLVASCNKQ----RKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWD 767
Query: 324 DAMKVYDSMIYKG 336
+ +K+ + M KG
Sbjct: 768 EVVKMREMMKAKG 780
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 140/346 (40%), Gaps = 60/346 (17%)
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
A+ L M G+ + T+ ++I L R + D + M G+ P++++ TT++N
Sbjct: 460 ALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMN 519
Query: 148 GLCAEGNVEQALGLAMRMDEMGYRCNSYT--------------------HGAIINGL--- 184
G+ G E+A+ +M E G R N+++ HG II L
Sbjct: 520 GMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHS 579
Query: 185 -------------CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGL 231
K G+ + A +KV G ++P+ A++ + G + EA+ L
Sbjct: 580 SLVSIETSLVDMYAKCGDINKA----EKVFGSKLYSELPLSNAMISAYALYGNLKEAIAL 635
Query: 232 WSEMTGKGIQPDVVTYNCLTRGLFHCSRGK------------VLKKGIMPDVHTFSAIVD 279
+ + G G++PD +T +T L C+ V K+ + P + + +VD
Sbjct: 636 YRSLEGVGLKPDNIT---ITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVD 692
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
G +A RL+ M +P+ SL+ A C + + + + + +
Sbjct: 693 LLASAGETEKALRLIEEMP---FKPDARMIQSLV-ASCNKQRKTELVDYLSRKLLESEPE 748
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI-CTWNALVG 384
++ Y T+ + + D+ + + M KGL C+W + G
Sbjct: 749 NSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITG 794
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 113/221 (51%), Gaps = 15/221 (6%)
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR---- 252
FK + D Y I+ LCK G +EA +++ + G+QPDV TYN + R
Sbjct: 2 FKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSL 61
Query: 253 GLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSL 312
G +++++G++PD T+++++ CK+ +A+A + V + T+N+L
Sbjct: 62 GRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK---------VSKSCSTFNTL 112
Query: 313 INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
IN +C +++D M ++ M +G + + +TY TLIHG+ ++ + A+ + EMV+ G+
Sbjct: 113 INGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGV 172
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRIT 413
T+ ++ C A ++ +QK + + +T
Sbjct: 173 YSSSITFRDILPQLCSRKELRKAVAML--LQKSSMVSNNVT 211
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
T YN +IHG CK K D+A ++ ++ GL PD+ T+N ++ F G A++L +
Sbjct: 14 TAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLG---RAEKLYA 69
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M + G +PD ITY ++ GL K + +A R++ K + ++ +++G C
Sbjct: 70 EMIRRGLVPDTITYNSMIHGLCKQNKLAQA----RKVSK-----SCSTFNTLINGYCKAT 120
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
R+KD F + +G+ +V TYT ++ G + G + A + +M G + T+
Sbjct: 121 RVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFR 180
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
+ L R ++ ++ L L K S + T
Sbjct: 181 DILPQLCSRKELRKAVAML-LQKSSMVSNNVT 211
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+ ++I+ + K + A ++ + G++ D T+ ++I R S + M
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLYAEMI 72
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ GL PD +T ++++GLC + + QA ++ C+++ +ING CK
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQA-------RKVSKSCSTF--NTLINGYCKATRVK 123
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
+ F ++ RG +V YT ++ + G N AL ++ EM G+ +T+ +
Sbjct: 124 DGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Query: 252 RGLFHCSRGKVLKKGIMPDVHTFSAIVDN 280
L CSR K L+K + + S + +N
Sbjct: 184 PQL--CSR-KELRKAVAMLLQKSSMVSNN 209
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
+++ + + N+D Y+I++ GLC G+ +A F+ L GL+ DV TY +M+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 493 REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
R L AE+L +M +G P+ TYN + GL ++ ++++ K
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK 101
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 86/208 (41%), Gaps = 21/208 (10%)
Query: 91 LVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLC 150
+ K M ++ D+ + I+I+ LC+ + D + + GL+PD+ T ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FS 59
Query: 151 AEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP 210
+ G E+ L M G ++ T+ ++I+GLCK K + R
Sbjct: 60 SLGRAEK---LYAEMIRRGLVPDTITYNSMIHGLCKQN---------KLAQARKVSKSCS 107
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKV 262
+ +++ CK V + + L+ EM +GI +V+TY L G ++
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 263 LKKGIMPDVHTFSAIVDNYCKEGMIARA 290
+ G+ TF I+ C + +A
Sbjct: 168 VSNGVYSSSITFRDILPQLCSRKELRKA 195
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 165/361 (45%), Gaps = 13/361 (3%)
Query: 216 MDSLCKDGLVNEALGLWSEMTGK-GIQPDVVTYNCLTRGLFHCSRGK--------VLKKG 266
+D K+ AL +++ + + +P TY L + L +C + +L +G
Sbjct: 115 LDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEG 174
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG-VEPNVFTYNSLINAHCLQDQMQDA 325
+ P + +++++ Y K ++ +A + +M V +P+VFT+ LI+ C +
Sbjct: 175 LKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLV 234
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT-PDICTWNALVG 384
+ M Y G STVTYNT+I G+ K ++ S+L +M+ G + PD+CT N+++G
Sbjct: 235 KSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIG 294
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
+ + S Q G PD T+ I++ K Y + S+ +EK
Sbjct: 295 SYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSL 354
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
Y+I+++ GR++ + F ++ +G+K + TY +V + GL+ + +L
Sbjct: 355 TTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVL 414
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISR-SEKYLQLMKGKGFSADATTTELLINFFSG 563
+ + +N + + GD++ E Y+Q M+ + D T +I ++
Sbjct: 415 RQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQ-MEERKCKPDKITFATMIKTYTA 473
Query: 564 N 564
+
Sbjct: 474 H 474
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 183/408 (44%), Gaps = 54/408 (13%)
Query: 52 AAVDFFNKMAAINPF-PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
+A+ FN + + + P K +T L ++ K A L + M S G++ +T +
Sbjct: 126 SALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSL 185
Query: 111 INCLCRLSRTDLGFCVLGLMFKMG-LEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
I+ + D F L M + +PD+ T T +++ C G + + + M +G
Sbjct: 186 ISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLG 245
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
C++ T+ II+G K G F+++E +++ + +DG ++L
Sbjct: 246 VGCSTVTYNTIIDGYGKAG-------MFEEME------------SVLADMIEDG---DSL 283
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK-----------GIMPDVHTFSAIV 278
PDV T N + + G+ ++K G+ PD+ TF+ ++
Sbjct: 284 ------------PDVCTLNSI---IGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILI 328
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
++ K GM + +M FM + TYN +I +++ V+ M Y+G
Sbjct: 329 LSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVK 388
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P+++TY +L++ + K + K S+L ++VN + D +N ++ + +AG KEL
Sbjct: 389 PNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKEL 448
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
M++ PD+IT+A ++ + H +AV +ELEK + I
Sbjct: 449 YIQMEERKCKPDKITFATMIK-TYTAHGIFDAV---QELEKQMISSDI 492
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 149/347 (42%), Gaps = 12/347 (3%)
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
RC +YT + G CK + ++ + F+ + G K + VYT+++ K L+++A
Sbjct: 143 RCKTYTKLFKVLGNCKQPDQASLL--FEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFS 200
Query: 231 LWSEMTG-KGIQPDVVTYN-----CLTRGLFHCSRGKVLKK---GIMPDVHTFSAIVDNY 281
M +PDV T+ C G F + VL+ G+ T++ I+D Y
Sbjct: 201 TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGY 260
Query: 282 CKEGMIARAERLMGFMARVGVE-PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
K GM E ++ M G P+V T NS+I ++ M+ Y G P
Sbjct: 261 GKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPD 320
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
T+N LI + K K S++ M + + T+N ++ F KAG ++
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 380
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M+ G P+ ITY +++ K + S+ R++ ++ ++ +++ G
Sbjct: 381 KMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAG 440
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
L +E + ++ + K D T+ M++ G+ D ++L M
Sbjct: 441 DLATMKELYIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQM 487
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 143/326 (43%), Gaps = 13/326 (3%)
Query: 203 RGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC-SRGK 261
R + D VY+ ++ + K G A+ L+SEM G +PD YN L H + K
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186
Query: 262 VLKK---------GI---MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
L+K GI P+V T++ ++ + + G + + L + V P+V+T+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
N +++A+ +++ V M C P +T+N LI + K ++ +K ++
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
P + T+N+++ + KA M A+ + M +P ITY ++ C
Sbjct: 307 SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSR 366
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
A ++ E+ + + + + ML+ C G +A + F A + D TY + +
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPN 515
+ + + + L+ ME+ G PN
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC-LQDQM 322
++ +PD +S ++ K+G A L M G P+ YN+LI AH +D+
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 185
Query: 323 QDAMKV---YDSMIYKG---CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
+ KV D M KG C P+ VTYN L+ + + K+D+ +L ++ ++PD+
Sbjct: 186 KALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDV 243
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
T+N ++ + K GM + +++ M+ + PD IT+ +++D K + + ++
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 437 L--------------------------------EKMNLDRHITIY-----SIMLDGLCSY 459
L +KMN +I + IM+ G C
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC-- 361
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
G + ARE F + + T M++ CR GL +A++L + P+ TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 520 NLFVQG 525
+
Sbjct: 422 KFLYKA 427
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 135/322 (41%), Gaps = 13/322 (4%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL-GL 161
D+ ++ +I+ + + +T + + M G PD ++ + +AL +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 162 AMRMDEMG--YRC--NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
+D+M RC N T+ ++ + G FK ++ DV + +MD
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL--------FHCSRGKVLKKGIMP 269
+ K+G++ E + + M +PD++T+N L + +++ P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+ TF++++ NY K MI +AE + M + P+ TY +I + + A +++
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
+ + + T N ++ +C+ +A L + PD T+ L + KA
Sbjct: 372 EEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Query: 390 GMPLAAKELISTMQKHGQLPDR 411
M + L+ M+K G +P++
Sbjct: 432 DMKEQVQILMKKMEKDGIVPNK 453
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 110/278 (39%), Gaps = 13/278 (4%)
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI----HGWCKIKKMDK 359
P+ Y+ LI+ + Q + AM ++ M GC P YN LI H K K ++K
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 360 AMSLLGEMVNKGL---TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
L +M KG+ P++ T+N L+ F ++G L + PD T+
Sbjct: 191 VRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++D K E ++ + I +++++D + + F L
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
K + T+ M+ + ++D AE + M + P+ TY + G +SR+
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 537 KYLQLMKGKGFSADATTTELLINFFSGN----KADNTF 570
+ + + A+T ++ + N +AD F
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLF 406
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 143/326 (43%), Gaps = 13/326 (3%)
Query: 203 RGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC-SRGK 261
R + D VY+ ++ + K G A+ L+SEM G +PD YN L H + K
Sbjct: 127 RWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAK 186
Query: 262 VLKK---------GI---MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
L+K GI P+V T++ ++ + + G + + L + V P+V+T+
Sbjct: 187 ALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTF 246
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
N +++A+ +++ V M C P +T+N LI + K ++ +K ++
Sbjct: 247 NGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMR 306
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
P + T+N+++ + KA M A+ + M +P ITY ++ C
Sbjct: 307 SKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSR 366
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
A ++ E+ + + + + ML+ C G +A + F A + D TY + +
Sbjct: 367 AREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYK 426
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPN 515
+ + + + L+ ME+ G PN
Sbjct: 427 AYTKADMKEQVQILMKKMEKDGIVPN 452
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC-LQDQM 322
++ +PD +S ++ K+G A L M G P+ YN+LI AH +D+
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 185
Query: 323 QDAMKVY---DSMIYKG---CLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
+ KV D M KG C P+ VTYN L+ + + K+D+ +L ++ ++PD+
Sbjct: 186 KALEKVRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDV 243
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
T+N ++ + K GM + +++ M+ + PD IT+ +++D K + + ++
Sbjct: 244 YTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKS 303
Query: 437 L--------------------------------EKMNLDRHITIY-----SIMLDGLCSY 459
L +KMN +I + IM+ G C
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYC-- 361
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
G + ARE F + + T M++ CR GL +A++L + P+ TY
Sbjct: 362 GSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTY 421
Query: 520 NLFVQG 525
+
Sbjct: 422 KFLYKA 427
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 135/322 (41%), Gaps = 13/322 (4%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL-GL 161
D+ ++ +I+ + + +T + + M G PD ++ + +AL +
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 162 AMRMDEMG--YRC--NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
+D+M RC N T+ ++ + G FK ++ DV + +MD
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL--------FHCSRGKVLKKGIMP 269
+ K+G++ E + + M +PD++T+N L + +++ P
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKP 311
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
+ TF++++ NY K MI +AE + M + P+ TY +I + + A +++
Sbjct: 312 TLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIF 371
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
+ + + T N ++ +C+ +A L + PD T+ L + KA
Sbjct: 372 EEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA 431
Query: 390 GMPLAAKELISTMQKHGQLPDR 411
M + L+ M+K G +P++
Sbjct: 432 DMKEQVQILMKKMEKDGIVPNK 453
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 110/278 (39%), Gaps = 13/278 (4%)
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI----HGWCKIKKMDK 359
P+ Y+ LI+ + Q + AM ++ M GC P YN LI H K K ++K
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 360 AMSLLGEMVNKGL---TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
L +M KG+ P++ T+N L+ F ++G L + PD T+
Sbjct: 191 VRGYLDKM--KGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
++D K E ++ + I +++++D + + F L
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
K + T+ M+ + ++D AE + M + P+ TY + G +SR+
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAR 368
Query: 537 KYLQLMKGKGFSADATTTELLINFFSGN----KADNTF 570
+ + + A+T ++ + N +AD F
Sbjct: 369 EIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLF 406
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 117/539 (21%), Positives = 220/539 (40%), Gaps = 107/539 (19%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+ +L+N + K ++ +I L K+M S G+E DS+TF+ V L G + G +
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 132 KMGL-------------------------------EPDIVTLTTIVNGLCAEGNVEQALG 160
K G E D+++ +I+NG + G E+ L
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLS 282
Query: 161 LAMRMDEMGYRCNSYTHGAIING---------------------------LC-------- 185
+ ++M G + T ++ G C
Sbjct: 283 VFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYS 342
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
K G+ +A F+++ R V YT+++ ++GL EA+ L+ EM +GI PDV
Sbjct: 343 KCGDLDSAKAVFREMSDRS----VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 398
Query: 246 TYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
T +T L C+R ++L +G VH + E +GF +
Sbjct: 399 T---VTAVLNCCARYRLLDEG--KRVHEWI--------------KENDLGF--------D 431
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
+F N+L++ + MQ+A V+ M K +++NT+I G+ K ++A+SL
Sbjct: 432 IFVSNALMDMYAKCGSMQEAELVFSEMRVK----DIISWNTIIGGYSKNCYANEALSLFN 487
Query: 366 EMV-NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
++ K +PD T ++ +E+ + ++G DR ++D KC
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC 547
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
A L+ ++ +L +++M+ G +G K+A F+ ++ G++ D ++
Sbjct: 548 GALLLAHMLFDDIASKDL----VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISF 603
Query: 485 TIMVQGLCREGLLDDAEQLLMDM-EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
++ GL+D+ + M E P Y V L R GD+ ++ ++++ M
Sbjct: 604 VSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM 662
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 141/351 (40%), Gaps = 70/351 (19%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDV 271
+ +M+ L K G + ++GL+ +M G++ D T++C+++
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSK------------------- 203
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
+FS++ + E+L GF+ + G NSL+ + ++ A KV+D
Sbjct: 204 -SFSSLRS-------VHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDE 255
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
M + +++N++I+G+ +K +S+ +M+ G+ D+ T ++ G
Sbjct: 256 MTER----DVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG------ 305
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
A LIS R ++I + F R +
Sbjct: 306 -CADSRLISL--------GRAVHSIGVKACFS--------------------REDRFCNT 336
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
+LD G L A+ F + + V +YT M+ G REGL +A +L +MEE+G
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRS----VVSYTSMIAGYAREGLAGEAVKLFEEMEEEG 392
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
P+ T + R + ++ + +K D + L++ ++
Sbjct: 393 ISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 183/469 (39%), Gaps = 72/469 (15%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P+ F ++N + L + M E D T+ ++I R+ R +L V
Sbjct: 234 PDTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFV 293
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L + G++ + T+ ++V G++ A + M E LCK
Sbjct: 294 LERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKR------------RDLCK 341
Query: 187 V-------GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
V + E + Y+A D + ++G+V+ ++ ++
Sbjct: 342 VLRECNAEDLKEKEEEEAEDDEDAFEDDEDSGYSA-RDEVSEEGVVD----VFKKLLPNS 396
Query: 240 IQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR 299
+ P +L K PD ++ ++ Y K G +A R++ M R
Sbjct: 397 VDP--------------SGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRR 442
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK 359
QD + P VTY T++ + MD+
Sbjct: 443 -------------------QDD-------------RNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 360 AMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM-QKHGQLPDRITYAIIL 418
A +L EM G+ + T+N L+ G+CK A++L+ M + G PD ++Y II+
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 419 DGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGL-QAKGL 477
DG A++ + E+ + Y+ ++ G+ K A F + +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRV 590
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
K+D+ + ++V+G CR GL++DA++++ M+E G PN TY G+
Sbjct: 591 KVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGV 639
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 124/593 (20%), Positives = 236/593 (39%), Gaps = 106/593 (17%)
Query: 38 RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVK---- 93
+ELL +R+ KT +A + P T L LV ++ + + SL +
Sbjct: 86 QELLFLLRNRKTDEAWAKYVQSTHLPGP-------TCLSRLVSQLSYQSKPESLTRAQSI 138
Query: 94 --------RMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTI 145
++H L D+ + ++ + +T V+ M + G P + T
Sbjct: 139 LTRLRNERQLHRL----DANSLGLLAMAAAKSGQTLYAVSVIKSMIRSGYLPHVKAWTAA 194
Query: 146 VNGLCAEGN--VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGR 203
V L A G+ E+++ L + AI + + G+ S +G +
Sbjct: 195 VASLSASGDDGPEESIKLFI---------------AITRRVKRFGDQSL-VGQSRP---- 234
Query: 204 GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG--- 260
D + A++++ G ++ L+ EM+ +PDV+TYN + + R
Sbjct: 235 ----DTAAFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELI 290
Query: 261 -----KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA-------RVGVEPNVFT 308
+++ KGI + T ++V Y G + AER++ M +V E N
Sbjct: 291 VFVLERIIDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAMREKRRDLCKVLRECNAED 350
Query: 309 YNSLI----------------NAHCLQDQMQDAMKVYDSMIYKGCLPSTV---------- 342
+ + +D++ + V D ++K LP++V
Sbjct: 351 LKEKEEEEAEDDEDAFEDDEDSGYSARDEVSEE-GVVD--VFKKLLPNSVDPSGEPPLLP 407
Query: 343 --------TYNTLIHGWCKIKKMDKAMSLLGEMV---NKGLTPDICTWNALVGGFCKAGM 391
Y TL+ G+ K ++ +L M ++ PD T+ +V F AG+
Sbjct: 408 KVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGL 467
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL-EKMNLDRHITIYS 450
A+++++ M + G +RITY ++L G K A L RE+ E ++ + Y+
Sbjct: 468 MDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYN 527
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM-EE 509
I++DG A FF+ ++ +G+ +YT +++ G A ++ +M +
Sbjct: 528 IIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMND 587
Query: 510 KGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
+ +N+ V+G R G I +++ + MK GF + T L N S
Sbjct: 588 PRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVS 640
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 19/348 (5%)
Query: 72 FTVLINLVVKMKHYTTAIS---LVKRMHSLGIE----ADSFTFTIVINCLCRLSRTDLGF 124
FT+ + + + HY++ LV R++ I+ + T I+I LC+ R
Sbjct: 195 FTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVV 254
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
+L + P ++ T++V + E +E+++ L R+ ++ + ++
Sbjct: 255 DLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAK 314
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
K G+ +A F ++ RGF + VYT + C+ G V EA L SEM G+ P
Sbjct: 315 AKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYD 374
Query: 245 VTYNCL----------TRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLM 294
T+NCL +GL +C ++ +G+MP F+ +V + K + RA ++
Sbjct: 375 ETFNCLIGGFARFGWEEKGLEYCE--VMVTRGLMPSCSAFNEMVKSVSKIENVNRANEIL 432
Query: 295 GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
G P+ TY+ LI + + A+K++ M Y+ P + +LI G C
Sbjct: 433 TKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTC 492
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
K++ L M + + P+ ++AL+ F K G A + + M
Sbjct: 493 GKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/493 (19%), Positives = 207/493 (41%), Gaps = 60/493 (12%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAI-NPFPNIKEFTVLINLVVKMKHYTTAISLVKR---- 94
+L ++ +T A+ FF+ + N IK + + I+++VK + A +L++
Sbjct: 83 ILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLN 142
Query: 95 -----------MHSLGIEADS-FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTL 142
+ + I + + F +++ C ++ +LGF V + G ++TL
Sbjct: 143 SPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITL 202
Query: 143 TTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEG 202
T+++ ++D++ +R Y ++
Sbjct: 203 NTLIH-----------YSSKSKIDDLVWRI-----------------------YECAIDK 228
Query: 203 RGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--- 259
R + ++ + I LCK+G + E + L + GK P V+ L + R
Sbjct: 229 RIYPNEITIRIMI-QVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEE 287
Query: 260 -----GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLIN 314
++L K ++ D +S +V KEG + A ++ M + G N F Y +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 315 AHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP 374
C + +++A ++ M G P T+N LI G+ + +K + MV +GL P
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMP 407
Query: 375 DICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLY 434
+N +V K A E+++ G +PD TY+ ++ G + + +A+ L+
Sbjct: 408 SCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLF 467
Query: 435 RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
E+E + ++ ++ GLC+ G+++ ++ ++ + ++ + Y +++ +
Sbjct: 468 YEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKI 527
Query: 495 GLLDDAEQLLMDM 507
G +A+++ +M
Sbjct: 528 GDKTNADRVYNEM 540
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/270 (21%), Positives = 105/270 (38%), Gaps = 43/270 (15%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+++++ K +A + M G A+SF +T+ + +C
Sbjct: 307 YSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR-VC---------------- 349
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
C +G+V++A L M+E G T +I G + G
Sbjct: 350 ------------------CEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEE 391
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
+ Y + + RG + ++ S+ K VN A + ++ KG PD TY+ L
Sbjct: 392 KGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLI 451
Query: 252 RGLFHCSR-GKVLK-------KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
RG + + LK + + P F +++ C G + E+ + M + +E
Sbjct: 452 RGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIE 511
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
PN Y++LI A +A +VY+ MI
Sbjct: 512 PNADIYDALIKAFQKIGDKTNADRVYNEMI 541
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 111/265 (41%), Gaps = 5/265 (1%)
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
AR+ ++ +SL+N+ D + + Y+ P + ++ L+ + KI+ +
Sbjct: 126 ARLLIDARALIESSLLNSPPDSDLVDSLLDTYE---ISSSTP--LVFDLLVQCYAKIRYL 180
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
+ + + + G T + T N L+ K+ + + P+ IT I+
Sbjct: 181 ELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIM 240
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
+ L K E V L + + + + ++ + R++++ L K +
Sbjct: 241 IQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNM 300
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
+D Y+I+V +EG L A ++ +M ++G N Y +FV+ +GD+ +E+
Sbjct: 301 VVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAER 360
Query: 538 YLQLMKGKGFSADATTTELLINFFS 562
L M+ G S T LI F+
Sbjct: 361 LLSEMEESGVSPYDETFNCLIGGFA 385
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 109/214 (50%), Gaps = 1/214 (0%)
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNA 381
+ A K++D M C + ++N L+ + KK+D+AM E+ K G+TPD+ T+N
Sbjct: 139 EHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNT 198
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
++ C+ G + ++K+G PD I++ +L+ ++ + E ++ ++ N
Sbjct: 199 MIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKN 258
Query: 442 LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE 501
L +I Y+ + GL + DA ++ +G+ DV TY ++ + L++
Sbjct: 259 LSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVM 318
Query: 502 QLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRS 535
+ +M+EKG P+ TY + + L ++GD+ R+
Sbjct: 319 KCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 13/238 (5%)
Query: 209 VPVYTAIMDSLCKDGLVNEALGLWSEMTGK-GIQPDVVTYNCLTRGLFHCSRG------- 260
V + A++ + ++EA+ + E+ K GI PD+VTYN + + L C +G
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKAL--CRKGSMDDILS 214
Query: 261 ---KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC 317
++ K G PD+ +F+ +++ + + + +R+ M + PN+ +YNS +
Sbjct: 215 IFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLT 274
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
+ DA+ + D M +G P TYN LI + +++ M EM KGLTPD
Sbjct: 275 RNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTV 334
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
T+ L+ CK G A E+ KH L Y +++ L EA L +
Sbjct: 335 TYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVK 392
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 15/247 (6%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE-MGYRCNSYTHGAIINGLCKVG 188
M ++ E + + +++ +++A+ + E +G + T+ +I LC+ G
Sbjct: 148 MPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 189 NTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN 248
+ + F+++E GF+ D+ + +++ + L E +W M K + P++ +YN
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYN 267
Query: 249 CLTRGLFHCSRGK----------VLK-KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
RGL +R K V+K +GI PDVHT++A++ Y + + + M
Sbjct: 268 SRVRGL---TRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEM 324
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
G+ P+ TY LI C + + A++V + I L Y ++ K+
Sbjct: 325 KEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKI 384
Query: 358 DKAMSLL 364
D+A L+
Sbjct: 385 DEATQLV 391
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK-GLKIDVFTYTIMV 488
A L+ E+ ++N +R + ++ +L + +L +A + F L K G+ D+ TY M+
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
+ LCR+G +DD + ++E+ G P+ ++N ++ RR ++ LMK K S
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLS 260
Query: 549 ADATTTELLINFFSGNK 565
+ + + + NK
Sbjct: 261 PNIRSYNSRVRGLTRNK 277
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 429 EAVSLYREL-EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIM 487
EA+ ++EL EK+ + + Y+ M+ LC G + D F L+ G + D+ ++ +
Sbjct: 175 EAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTL 234
Query: 488 VQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
++ R L + +++ M+ K PN +YN V+GL R + + + +MK +G
Sbjct: 235 LEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGI 294
Query: 548 SADATTTELLINFF 561
S D T LI +
Sbjct: 295 SPDVHTYNALITAY 308
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 81/221 (36%), Gaps = 36/221 (16%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRM-HSLGIEADSFTFT 108
+ A F++M +N +K F L++ V K A+ K + LGI D T+
Sbjct: 138 AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYN 197
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTI----------------------- 145
+I LCR D + + K G EPD+++ T+
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 146 ------------VNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
V GL AL L M G + +T+ A+I N
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEV 317
Query: 194 IGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
+ + +++ +G D Y ++ LCK G ++ A+ + E
Sbjct: 318 MKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 134/284 (47%), Gaps = 36/284 (12%)
Query: 277 IVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG 336
I+ Y K GM A+++ M + +V ++N+L++A+ L + ++++ + K
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 337 CL-PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAA 395
+ P V+YNTLI C+ + +A++LL E+ NKGL PDI T+N L+
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLL------------ 222
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
L S ++ +L + I ++ + N+ I Y+ L G
Sbjct: 223 --LSSYLKGQFELGEEIWAKMV---------------------EKNVAIDIRTYNARLLG 259
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
L + + K+ F L+A GLK DVF++ M++G EG +D+AE ++ + G P+
Sbjct: 260 LANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPD 319
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
T+ L + + + GD + + + K + TT + L++
Sbjct: 320 KATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVD 363
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 112/228 (49%), Gaps = 15/228 (6%)
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCL------------TRGLFHCSRGKVLKKGIM 268
K G+ A ++ EM + + V+++N L LF+ GK+ I
Sbjct: 121 KAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL---SIK 177
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
PD+ +++ ++ C++ + A L+ + G++P++ T+N+L+ + L+ Q + ++
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEI 237
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+ M+ K TYN + G K + ++L GE+ GL PD+ ++NA++ G
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
G A+ + KHG PD+ T+A++L + K + A+ L++E
Sbjct: 298 EGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 87/197 (44%), Gaps = 8/197 (4%)
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
++ +I LC+ + A+ ++E +G K D+ + ++ S G +W++M
Sbjct: 182 SYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKM 241
Query: 236 TGKGIQPDVVTYNCLTRGLFHCSRGKVL--------KKGIMPDVHTFSAIVDNYCKEGMI 287
K + D+ TYN GL + ++ K L G+ PDV +F+A++ EG +
Sbjct: 242 VEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGKM 301
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
AE + + G P+ T+ L+ A C + A++++ K L T L
Sbjct: 302 DEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQL 361
Query: 348 IHGWCKIKKMDKAMSLL 364
+ K K ++A ++
Sbjct: 362 VDELVKGSKREEAEEIV 378
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 68/153 (44%)
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
L I+ D ++ +I LC +L + GL+PDIVT T++ +G E
Sbjct: 174 LSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFEL 233
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
+ +M E + T+ A + GL + + F +++ G K DV + A++
Sbjct: 234 GEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIR 293
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL 250
+G ++EA + E+ G +PD T+ L
Sbjct: 294 GSINEGKMDEAEAWYKEIVKHGYRPDKATFALL 326
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 154/374 (41%), Gaps = 31/374 (8%)
Query: 51 DAAVDFFNKMAAINPFP-NIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+A + FF+ + N + N + + + I + K + SL M G T+ I
Sbjct: 659 NAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAI 718
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEG--NVEQALGLAMRMDE 167
+I R T++ M MGL P T ++ LC + NVE+A M
Sbjct: 719 MIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIR 778
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G+ + + LC+VGNT A + GF V Y+ + +LC+ G + E
Sbjct: 779 SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTV-AYSIYIRALCRIGKLEE 837
Query: 228 ALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI 287
AL + G+ R L D +T+ +IV + G +
Sbjct: 838 ALSELASFEGE-------------RSLL--------------DQYTYGSIVHGLLQRGDL 870
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
+A + M +G +P V Y SLI + Q++ ++ M + C PS VTY +
Sbjct: 871 QKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAM 930
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
I G+ + K+++A + M +G +PD T++ + C+A A +L+S M G
Sbjct: 931 ICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGI 990
Query: 408 LPDRITYAIILDGL 421
P I + + GL
Sbjct: 991 APSTINFRTVFYGL 1004
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/382 (20%), Positives = 166/382 (43%), Gaps = 23/382 (6%)
Query: 199 KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCS 258
++E G D+ +T ++ K + + L ++ +M G + D YN + R L
Sbjct: 214 EMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAG 273
Query: 259 RG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG--VEPNVFT 308
RG ++++KGI + T+ ++D K + + + M R+ E + F
Sbjct: 274 RGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFG 333
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
Y L+ + C+ ++++A+++ + K + L+ G C+ +M A+ ++ M
Sbjct: 334 Y--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMK 391
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
+ L D + ++ G+ + A E ++K G+ P TY I+ LFK +
Sbjct: 392 RRKL-DDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFE 450
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
+ +L+ E+ + ++ + ++ G R+ +A + FS ++ KG+K +Y+I V
Sbjct: 451 KGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFV 510
Query: 489 QGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDIS----------RSEKY 538
+ LCR D+ ++ M D ++ + + + G+ RS Y
Sbjct: 511 KELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSY 570
Query: 539 LQLMKGKGFSADATTTELLINF 560
+ G G + + EL+ ++
Sbjct: 571 CDELNGSGKAEFSQEEELVDDY 592
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 9/293 (3%)
Query: 266 GIMPDVHTFSAIVDNYC-KEGM-IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ 323
G++P TF ++ C K+G + A R M R G P+ + C +
Sbjct: 743 GLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTK 802
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
DA DS+ G P TV Y+ I C+I K+++A+S L + D T+ ++V
Sbjct: 803 DAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIV 861
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
G + G A + +++M++ G P Y ++ FK + + +++E + +
Sbjct: 862 HGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCE 921
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+ Y+ M+ G S G++++A F ++ +G D TY+ + LC+ +DA +L
Sbjct: 922 PSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKL 981
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRG--DISRSEKYLQLMKGKGFSADATTT 554
L +M +KG P+ + GL R G D++R + L K A T +
Sbjct: 982 LSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR----IALQKKSALVAQRTVS 1030
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 170/422 (40%), Gaps = 39/422 (9%)
Query: 45 RDLKTVDAAVDFFNKMAAINPFPN-IKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
R K A+ FFN + + F + + + ++++ + ++ LV M G + D
Sbjct: 164 RCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKD 223
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
T+TI+I+ + + G V M K G E D ++ LC G + AL
Sbjct: 224 IRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYK 283
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF----DVPVYTAIMDSL 219
M E G T+ +++ + K S + + + + + + ++ S
Sbjct: 284 EMMEKGITFGLRTYKMLLDCIAK----SEKVDVVQSIADDMVRICEISEHDAFGYLLKSF 339
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVD 279
C G + EAL L E+ K + CL D F +V
Sbjct: 340 CVSGKIKEALELIRELKNKEM--------CL-------------------DAKYFEILVK 372
Query: 280 NYCKEGMIARAERLMGFMARVGVE-PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
C+ + A ++ M R ++ NV Y +I+ + Q+ + A++ ++ + G
Sbjct: 373 GLCRANRMVDALEIVDIMKRRKLDDSNV--YGIIISGYLRQNDVSKALEQFEVIKKSGRP 430
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
P TY ++ K+K+ +K +L EM+ G+ PD A+V G A ++
Sbjct: 431 PRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKV 490
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCS 458
S+M++ G P +Y+I + L + Y E + ++ ++ + I+S ++ +
Sbjct: 491 FSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEK 550
Query: 459 YG 460
G
Sbjct: 551 NG 552
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 162/381 (42%), Gaps = 35/381 (9%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
+LS + + +D + ++M +I+ +T+LI++ K K + + ++M G
Sbjct: 195 MLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSG 254
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
E D+ + I+I LC R DL M + G+ + T +++ + V+
Sbjct: 255 FELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQ 314
Query: 160 GLAMRMDEMGYRCNSYTH---GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+A D+M C H G ++ C G A+ ++++ + D + ++
Sbjct: 315 SIA---DDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILV 371
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH-------CSRGKVLKK-GIM 268
LC+ + +AL + M + + D Y + G + +V+KK G
Sbjct: 372 KGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRP 430
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P V T++ I+ + K + L M G+EP+ +++ H Q+++ +A KV
Sbjct: 431 PRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKV 490
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT--PDICTWNALVGGF 386
+ SM KG P+ +Y+ + C+ + D+ + + +M + DI +W
Sbjct: 491 FSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSW------- 543
Query: 387 CKAGMPLAAKELISTMQKHGQ 407
+IS+M+K+G+
Sbjct: 544 -----------VISSMEKNGE 553
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 112/516 (21%), Positives = 207/516 (40%), Gaps = 42/516 (8%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+ ++I+ ++ + A+ + + G T+T ++ L +L + + G + M
Sbjct: 401 YGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMI 460
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ G+EPD V +T +V G + V +A + M+E G + ++ + LC+
Sbjct: 461 ENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYD 520
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG------LVNE----ALGLWSEMTGKGI- 240
I F ++ +++ ++ S+ K+G L+ E + E+ G G
Sbjct: 521 EIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKA 580
Query: 241 -----QPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAI----VDNYCKEGMIARA- 290
+ V YNC +++++ +P SA+ V C+ +R
Sbjct: 581 EFSQEEELVDDYNC----------PQLVQQSALPP--ALSAVDKMDVQEICRVLSSSRDW 628
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK--GCLPSTVTYNTLI 348
ER + + V+ FT ++ +A+ + S + K G ++ YN I
Sbjct: 629 ERTQEALEKSTVQ---FTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSI 685
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
K + SL EM +G TW ++ + + G+ A M+ G +
Sbjct: 686 KVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLI 745
Query: 409 PDRITYAIILDGL--FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
P T+ ++ L K EA +RE+ + + L LC G KDA+
Sbjct: 746 PSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAK 805
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
L G + V Y+I ++ LCR G L++A L E + + TY V GL
Sbjct: 806 SCLDSLGKIGFPVTV-AYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGL 864
Query: 527 LRRGDISRSEKYLQLMKGKGFSADATT-TELLINFF 561
L+RGD+ ++ + MK G T L++ FF
Sbjct: 865 LQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFF 900
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 7/239 (2%)
Query: 325 AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK--KMDKAMSLLGEMVNKGLTPDICTWNAL 382
A++ + M G +PS+ T+ LI C+ K +++A EM+ G PD
Sbjct: 732 AIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDY 791
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR--ELEKM 440
+G C+ G AK + ++ K G P + Y+I + L + EA+S E E+
Sbjct: 792 LGCLCEVGNTKDAKSCLDSLGKIG-FPVTVAYSIYIRALCRIGKLEEALSELASFEGERS 850
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
LD++ Y ++ GL G L+ A + + ++ G K V YT ++ +E L+
Sbjct: 851 LLDQYT--YGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV 908
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
+ ME + C P+ TY + G + G + + + M+ +G S D T IN
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFIN 967
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 129/299 (43%), Gaps = 7/299 (2%)
Query: 252 RGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
R LF+ R ++G + T++ ++ Y + G+ A R M +G+ P+ T+
Sbjct: 698 RSLFYEMR----RQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKC 753
Query: 312 LINAHCLQD--QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
LI C + +++A + + MI G +P + C++ A S L +
Sbjct: 754 LITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGK 813
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
G P ++ + C+ G A +++ + L D+ TY I+ GL + +
Sbjct: 814 IGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQK 872
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
A+ ++++ + +Y+ ++ +L+ E ++ + + V TYT M+
Sbjct: 873 ALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMIC 932
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFS 548
G G +++A +MEE+G P+ TY+ F+ L + + K L M KG +
Sbjct: 933 GYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIA 991
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 109/261 (41%), Gaps = 1/261 (0%)
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG 350
+ L+ M + G + ++ T+ LI+ + ++ + V++ M G YN +I
Sbjct: 209 DELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRS 268
Query: 351 WCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPD 410
C + D A+ EM+ KG+T + T+ L+ K+ + + M + ++ +
Sbjct: 269 LCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISE 328
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
+ +L EA+ L REL+ + + I++ GLC R+ DA E
Sbjct: 329 HDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD 388
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
++ + L D Y I++ G R+ + A + +++ G PP TY +Q L +
Sbjct: 389 IMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLK 447
Query: 531 DISRSEKYLQLMKGKGFSADA 551
+ M G D+
Sbjct: 448 QFEKGCNLFNEMIENGIEPDS 468
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 397 ELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL 456
EL M + G + + +TY ++ GLF+ A +++E+ + I Y+I+LDGL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 457 CSYGRLK---------DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
C G+L+ D + F L KG+K +V TYT M+ G C++G ++A L M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKAD 567
+E G P+ TYN ++ LR GD + S + ++ M+ F+ DA+T L+ + + D
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLD 181
Query: 568 NTF 570
F
Sbjct: 182 KGF 184
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 89/200 (44%), Gaps = 36/200 (18%)
Query: 231 LWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARA 290
L+ EM+ +G+ + VTY L +GLF G A
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQA---------------------------GDCDMA 35
Query: 291 ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM---KVYD------SMIYKGCLPST 341
+ + M GV P++ TYN L++ C +++ A+ KV D S+ KG P+
Sbjct: 36 QEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNV 95
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
VTY T+I G+CK ++A +L +M G PD T+N L+ + G A+ ELI
Sbjct: 96 VTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Query: 402 MQKHGQLPDRITYAIILDGL 421
M+ D TY ++ D L
Sbjct: 156 MRSCRFAGDASTYGLVTDML 175
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 10/175 (5%)
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
M++ G+ N TY +LI A +++ M+ G P +TYN L+ G CK K
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 357 MDKAM---------SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
++KA+ L + KG+ P++ T+ ++ GFCK G A L M++ G
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
LPD TY ++ + + L +E+ + Y ++ D L GRL
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD-GRL 180
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 10/182 (5%)
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
M+++ M +G + +TVTY TLI G + D A + EMV+ G+ PDI T+N L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 386 FCK---------AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
CK AG +L ++ G P+ +TY ++ G K F EA +L+R+
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
+++ Y+ ++ G + E +++ D TY + V + +G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGL-VTDMLHDGR 179
Query: 497 LD 498
LD
Sbjct: 180 LD 181
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 87/188 (46%), Gaps = 16/188 (8%)
Query: 54 VDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINC 113
++ F +M+ N +T LI + + A + K M S G+ D T+ I+++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 114 LCRLSRTDLG------------FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGL 161
LC+ + + FC L L G++P++VT TT+++G C +G E+A L
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLK---GVKPNVVTYTTMISGFCKKGFKEEAYTL 117
Query: 162 AMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCK 221
+M E G +S T+ +I + G+ +A+ K++ F D Y + D L
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-H 176
Query: 222 DGLVNEAL 229
DG +++
Sbjct: 177 DGRLDKGF 184
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 36/165 (21%)
Query: 161 LAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
L M + G N+ T+ +I GL + G+ A FK++ G D+ Y ++D LC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 221 KDGLVNEAL---------GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDV 271
K+G + +AL L+ ++ KG++P+VVTY + G
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISG------------------ 104
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH 316
+CK+G A L M G P+ TYN+LI AH
Sbjct: 105 ---------FCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAH 140
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 87/190 (45%), Gaps = 15/190 (7%)
Query: 89 ISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNG 148
+ L + M G+ ++ T+T +I L + D+ + M G+ PDI+T +++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 149 LCAEGNVEQALGLAMRMDE----------MGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
LC G +E+AL +A ++++ G + N T+ +I+G CK G A F+
Sbjct: 61 LCKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 199 KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCS 258
K++ G D Y ++ + +DG + L EM D TY +T + H
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD-MLHDG 178
Query: 259 RGKVLKKGIM 268
R L KG +
Sbjct: 179 R---LDKGFL 185
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 11/147 (7%)
Query: 431 VSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQG 490
+ L+RE+ + L + Y+ ++ GL G A+E F + + G+ D+ TY I++ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 491 LCREGLL---------DDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQL 541
LC+ G L +D L + KG PN TY + G ++G + +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 542 MKGKGFSADATTTELLI--NFFSGNKA 566
MK G D+ T LI + G+KA
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKA 147
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/518 (20%), Positives = 210/518 (40%), Gaps = 11/518 (2%)
Query: 38 RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS 97
R ++ + A ++ ++ PN LINL K AI ++ M
Sbjct: 388 RSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTG 447
Query: 98 LGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQ 157
+G + S I++ ++ + D+ CVL F + + + +++V G V+
Sbjct: 448 IGCQYSSI-LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDD 506
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
LGL S+ + +I + G + A+ + + ++ + + ++D
Sbjct: 507 CLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMID 566
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFH-------CSRGKVL--KKGIM 268
G +EA L+ + G+ D + ++ + R CS +++ +K I+
Sbjct: 567 IYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIV 626
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
PDV+ F ++ Y K + + + L + + G+ N YN +IN + +
Sbjct: 627 PDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGT 686
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
++ MI G P+TVT+N L+ + K K K L G+ D+ ++N ++ + K
Sbjct: 687 FEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGK 745
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
I MQ G Y +LD K + S+ + ++K
Sbjct: 746 NKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYT 805
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
Y+IM++ G + + + L+ GL D+ +Y +++ G++++A L+ +M
Sbjct: 806 YNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMR 865
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
+ P+ TY V L R + + K+ MK G
Sbjct: 866 GRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 113/555 (20%), Positives = 218/555 (39%), Gaps = 58/555 (10%)
Query: 60 MAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSR 119
M A PNI + LI K+ A L R+ ++G+E D ++ +I R
Sbjct: 340 MEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADN 399
Query: 120 TDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGA 179
+ + + G +P+ L T++N G+ + A+ M +G + +S G
Sbjct: 400 YEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GI 458
Query: 180 IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKG 239
I+ KVG K + + +++++ + K G+V++ LGL E +
Sbjct: 459 ILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRD 518
Query: 240 IQPDVVTYNCLTRGLFHCSRGKVLKKGI--------------------MPDVHT------ 273
+ Y+ L + C L + M D++T
Sbjct: 519 SAFESHLYHLL---ICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFS 575
Query: 274 --------------------FSAIVDNYCKEGMIARAERLMGFM-ARVGVEPNVFTYNSL 312
FS +V Y K G + A ++ M + + P+V+ + +
Sbjct: 576 EAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDM 635
Query: 313 INAH--C-LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
+ + C LQD++Q +Y + G + YN +I+ + +D+ EM+
Sbjct: 636 LRIYQKCDLQDKLQ---HLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIR 692
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE 429
G TP+ T+N L+ + KA + EL ++HG + D I+Y I+ K Y
Sbjct: 693 YGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHG-VVDVISYNTIIAAYGKNKDYTN 751
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
S + ++ + Y+ +LD +++ R ++ D +TY IM+
Sbjct: 752 MSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
+G +D+ +L +++E G P+ C+YN ++ G + + ++ M+G+
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871
Query: 550 DATTTELLINFFSGN 564
D T L+ N
Sbjct: 872 DKVTYTNLVTALRRN 886
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/474 (19%), Positives = 200/474 (42%), Gaps = 24/474 (5%)
Query: 53 AVDFFNKMAAINPF-PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSF-TFTIV 110
A+ FF+ M N +++++ ++ + + + A L+K + S+ F V
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
I + L +M + G+ P++ T+ ++ NVE+A M + G
Sbjct: 217 IYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALG 230
C S + ++I ++ A ++ + + + ++++ + G + A
Sbjct: 277 VCES-AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAES 335
Query: 231 LWSEMTGKGIQPDVVTYNCL------------TRGLFHCSRGKVLKKGIMPDVHTFSAIV 278
+ M G P+++ YN L +GLFH ++ G+ PD ++ +++
Sbjct: 336 ILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFH----RLCNIGLEPDETSYRSMI 391
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+ + + A+ + R G +PN F +LIN A+K + M GC
Sbjct: 392 EGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQ 451
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL 398
S++ ++ + K+ K+D +L + + + ++++LV + K GM L
Sbjct: 452 YSSIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGL 510
Query: 399 ISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY--SIMLDGL 456
+ + + Y +++ + +AV +Y KM D I ++ S M+D
Sbjct: 511 LREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYN--HKMESDEEINLHITSTMIDIY 568
Query: 457 CSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
G +A + + L++ G+ +D ++I+V+ + G L++A +L M+E+
Sbjct: 569 TVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQ 622
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 170/415 (40%), Gaps = 51/415 (12%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+ S ++ + AV +N + N+ + +I++ M ++ A L + S G
Sbjct: 529 LICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSG 588
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKM-GLEPDIVTLTTIVNGLCAEGNVEQA 158
+ D F+IV+ + + VL +M + + PD+ ++ + Q
Sbjct: 589 VVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLR-------IYQK 641
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
L ++ + YR + G ++ +Y +++
Sbjct: 642 CDLQDKLQHLYYR----------------------------IRKSGIHWNQEMYNCVINC 673
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK-----------GI 267
+ ++E G + EM G P+ VT+N L L + K+ KK G+
Sbjct: 674 CARALPLDELSGTFEEMIRYGFTPNTVTFNVL---LDVYGKAKLFKKVNELFLLAKRHGV 730
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
+ DV +++ I+ Y K + M G ++ YN+L++A+ QM+
Sbjct: 731 V-DVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRS 789
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+ M P TYN +I+ + + +D+ +L E+ GL PD+C++N L+ +
Sbjct: 790 ILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYG 849
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
GM A L+ M+ +PD++TY ++ L + + EA+ +++M +
Sbjct: 850 IGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMGI 904
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 105/583 (18%), Positives = 223/583 (38%), Gaps = 109/583 (18%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
++ +I + +++ Y A ++ M + + +++N + + +L +L M
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME 341
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
G P+I+ T++ G +E A GL R+ +G + ++ ++I G + N
Sbjct: 342 AAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYE 401
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ---------- 241
A Y+++++ G+K + +++ K G + A+ +MTG G Q
Sbjct: 402 EAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQ 461
Query: 242 -------PDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI------- 287
DVV C+ +G FH I + +FS++V Y K GM+
Sbjct: 462 AYEKVGKIDVVP--CVLKGSFH--------NHIRLNQTSFSSLVMAYVKHGMVDDCLGLL 511
Query: 288 ----------------------------ARAERLMGFMARVGVEPNVFTYNSLINAHCLQ 319
A ++ E N+ +++I+ + +
Sbjct: 512 REKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVM 571
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM-VNKGLTPDI-- 376
+ +A K+Y ++ G + + ++ ++ + K +++A S+L M K + PD+
Sbjct: 572 GEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYL 631
Query: 377 ----------------------------CTWNA----LVGGFCKAGMPLAAKELISTMQ- 403
WN V C +PL EL T +
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPL--DELSGTFEE 689
Query: 404 --KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
++G P+ +T+ ++LD K + + L+ ++ + I+ +I + +YG+
Sbjct: 690 MIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTI----IAAYGK 745
Query: 462 LKDAREFFSG---LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
KD S +Q G + + Y ++ ++ ++ +L M++ P+ T
Sbjct: 746 NKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYT 805
Query: 519 YNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
YN+ + +G I L+ +K G D + LI +
Sbjct: 806 YNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAY 848
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 147/328 (44%), Gaps = 12/328 (3%)
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR----- 259
F+ V+ ++ + K G V A + M G++P+V T L GL+ +
Sbjct: 206 FQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLM-GLYQKNWNVEEA 264
Query: 260 ----GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
+ K GI+ + +S+++ Y + + +AE ++ M + V + + ++NA
Sbjct: 265 EFAFSHMRKFGIVCE-SAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNA 323
Query: 316 HCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
+ Q +M+ A + SM G P+ + YNTLI G+ KI KM+ A L + N GL PD
Sbjct: 324 YSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPD 383
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYR 435
++ +++ G+ +A AK +++ G P+ +++ K A+
Sbjct: 384 ETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIE 443
Query: 436 ELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
++ + ++ +I I+L G++ G ++++ +++ +V + G
Sbjct: 444 DMTGIGC-QYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHG 502
Query: 496 LLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
++DD LL + + + Y+L +
Sbjct: 503 MVDDCLGLLREKKWRDSAFESHLYHLLI 530
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 195/471 (41%), Gaps = 75/471 (15%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
+F++ E D+ + T+++G G V+ A + RM E N + A+++ +
Sbjct: 148 LFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYVQNSK 203
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
A FK E + + + ++ K + EA + M + DVV++N
Sbjct: 204 MEEACMLFKSREN----WALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNT 255
Query: 250 LTRGLFHCSRGKV------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
+ G + GK+ + + DV T++A+V Y + M+ A L M E
Sbjct: 256 IITG--YAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP----E 309
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
N ++N+++ + ++M+ A +++D M + + T+NT+I G+ + K+ +A +L
Sbjct: 310 RNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISEAKNL 365
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILD---- 419
+M + D +W A++ G+ ++G A L M++ G +R +++ L
Sbjct: 366 FDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 420 ---------------------GLF----------KCHFYPEAVSLYRELEKMNLDRHITI 448
G F KC EA L++E+ + I
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEM----AGKDIVS 477
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM- 507
++ M+ G +G + A FF ++ +GLK D T ++ GL+D Q M
Sbjct: 478 WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMT 537
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
++ G PN Y V L R G + E LMK F DA L+
Sbjct: 538 QDYGVMPNSQHYACMVDLLGRAGLL---EDAHNLMKNMPFEPDAAIWGTLL 585
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/293 (17%), Positives = 121/293 (41%), Gaps = 52/293 (17%)
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
+ ++ +N I+++ + +A++V+ M S+V+YN +I G+ + + + A
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPR----WSSVSYNGMISGYLRNGEFELARK 116
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH----------------- 405
L EM + D+ +WN ++ G+ + A+EL M +
Sbjct: 117 LFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 406 --------GQLPDR--ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
++P++ +++ +L + EA L++ E L ++ +L G
Sbjct: 173 VDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGG 228
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
++ +AR+FF + + DV ++ ++ G + G +D+A QL + P
Sbjct: 229 FVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE-----SPVQ 279
Query: 516 DC-TYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKAD 567
D T+ V G ++ + + + M + + + +L + G + +
Sbjct: 280 DVFTWTAMVSGYIQNRMVEEARELFDKMPERN---EVSWNAMLAGYVQGERME 329
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/530 (22%), Positives = 210/530 (39%), Gaps = 81/530 (15%)
Query: 38 RELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLV----- 92
REL S+R KT D VD K P ++ F +I K K A+++V
Sbjct: 119 RELAFSLRAAKTADD-VDAVLKDKGELP---LQVFCAMIKGFGKDKRLKPAVAVVDWLKR 174
Query: 93 KRMHSLG-IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCA 151
K+ S G I + F + ++ + + +L M + G+ P+IVT T++
Sbjct: 175 KKSESGGVIGPNLFIYNSLLGAMRGFGEAE---KILKDMEEEGIVPNIVTYNTLMVIYME 231
Query: 152 EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVE---------- 201
EG +ALG+ E G+ N T+ + ++ + A+ +F ++
Sbjct: 232 EGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRMEDGMGALEFFVELREKYAKREIGN 291
Query: 202 --GRGFKFDVPVYTAIMDSLC----------KDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
G ++F+ + +C D L L + M G++P +
Sbjct: 292 DVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHE- 350
Query: 250 LTRGLFHCSR------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
R ++ C+R GK L K I FS I + C
Sbjct: 351 --RLIWACTREEHYIVGKELYKRIR---ERFSEISLSVC--------------------- 384
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY-------NTLIHGWCKIKK 356
N LI + A+++Y+ ++ +G P+ ++Y N L+ K
Sbjct: 385 ------NHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGI 438
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+ LL +M +KGL P WNA++ KA AA ++ M +G+ P I+Y
Sbjct: 439 WRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGA 498
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
+L L K Y EA ++ + K+ ++ ++ Y+ M L + + +KG
Sbjct: 499 LLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKG 558
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
++ V T+ ++ G R GL A + M+ + PN+ TY + ++ L
Sbjct: 559 IEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEAL 608
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 128/320 (40%), Gaps = 15/320 (4%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
++D + N M + P+ +E LI + +HY L KR+ E
Sbjct: 321 VKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEIS 380
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN-------GLCAEGNVE 156
+I + + + + + G EP+ ++ +V+ G
Sbjct: 381 LSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWR 440
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
+ L +M++ G + A++ K T+AAI FK + G K V Y A++
Sbjct: 441 WGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALL 500
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVL--------KKGIM 268
+L K L +EA +W+ M GI+P++ Y + L + +L KGI
Sbjct: 501 SALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIE 560
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P V TF+A++ + G+ A M VEPN TY LI A + + A ++
Sbjct: 561 PSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
Query: 329 YDSMIYKGCLPSTVTYNTLI 348
+ +G S+ Y+ ++
Sbjct: 621 HVKAQNEGLKLSSKPYDAVV 640
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 73/187 (39%), Gaps = 3/187 (1%)
Query: 35 PKRRE---LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISL 91
P+RR +L + AA+ F M P + + L++ + K K Y A +
Sbjct: 456 PQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRV 515
Query: 92 VKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCA 151
M +GIE + + +T + + L + +L +L M G+EP +VT +++G
Sbjct: 516 WNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCAR 575
Query: 152 EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV 211
G A RM N T+ +I L A K + G K
Sbjct: 576 NGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLSSKP 635
Query: 212 YTAIMDS 218
Y A++ S
Sbjct: 636 YDAVVKS 642
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 86/213 (40%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
LLS+ V NKM P + + ++ K T AI + K M G
Sbjct: 429 LLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNG 488
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
+ ++ +++ L + D F V M K+G+EP++ TT+ + L +
Sbjct: 489 EKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLD 548
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
L M G + T A+I+G + G + A +F +++ + + Y ++++L
Sbjct: 549 TLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEAL 608
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
D A L + +G++ Y+ + +
Sbjct: 609 ANDAKPRLAYELHVKAQNEGLKLSSKPYDAVVK 641
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 102/205 (49%), Gaps = 8/205 (3%)
Query: 181 INGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGI 240
+ LC V T + FK++ F D + A++ +LC++ + +A ++ + +
Sbjct: 154 VAKLCSVRQTVESFWKFKRLVPDFF--DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-F 210
Query: 241 QPDVVTYNCLTRGLFHCSRGKVLK-----KGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
QPD+ T+N L G + KG+ PDV T+++++D YCK+ I +A +L+
Sbjct: 211 QPDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLID 270
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
M P+V TY ++I L Q A +V M GC P YN I +C +
Sbjct: 271 KMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIAR 330
Query: 356 KMDKAMSLLGEMVNKGLTPDICTWN 380
++ A L+ EMV KGL+P+ T+N
Sbjct: 331 RLGDADKLVDEMVKKGLSPNATTYN 355
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 304 PNVFT---YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
P+ F +N+L+ C + M DA VY S+ ++ P T+N L+ GW K ++A
Sbjct: 175 PDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGW---KSSEEA 230
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
+ EM KGL PD+ T+N+L+ +CK A +LI M++ + PD ITY ++ G
Sbjct: 231 EAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGG 290
Query: 421 LFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID 480
L GL G+ ARE ++ G D
Sbjct: 291 L---------------------------------GLI--GQPDKAREVLKEMKEYGCYPD 315
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
V Y ++ C L DA++L+ +M +KG PN TYNLF + L D+ RS +
Sbjct: 316 VAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYV 375
Query: 541 LMKGKGFSADATTTELLINFFSGNK 565
M G + + LI F ++
Sbjct: 376 RMLGNECLPNTQSCMFLIKMFKRHE 400
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 200 VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR 259
++G+G K DV Y +++D CKD + +A L +M + PDV+TY + GL +
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 260 G----KVLKK----GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
+VLK+ G PDV ++A + N+C + A++L+ M + G+ PN TYN
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
L + + + ++Y M+ CLP+T + LI + + +K+D AM L +MV KG
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 372 L 372
Sbjct: 417 F 417
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 22/245 (8%)
Query: 134 GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAA 193
GL+PD+VT ++++ C + +E+A L +M E + T+ +I GL +G A
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 194 IGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
K+++ G DV Y A + + C + +A L EM KG+ P+ TYN R
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 254 LFHCS---RG-----KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
L + R ++L +P+ + ++ + + + A RL M G
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSY 420
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
+ L++ C ++++A K M+ KG PS V++ K + LL
Sbjct: 421 SLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF--------------KRIKLLM 466
Query: 366 EMVNK 370
E+ NK
Sbjct: 467 ELANK 471
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 7/196 (3%)
Query: 370 KGLTPDI---CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHF 426
K L PD +NAL+ C+ A+ + ++ KH PD T+ I+L G
Sbjct: 171 KRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSG---WKS 226
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
EA + + E++ L + Y+ ++D C ++ A + ++ + DV TYT
Sbjct: 227 SEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT 286
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
++ GL G D A ++L +M+E GC P+ YN ++ + ++K + M KG
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKG 346
Query: 547 FSADATTTELLINFFS 562
S +ATT L S
Sbjct: 347 LSPNATTYNLFFRVLS 362
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 14/223 (6%)
Query: 204 GFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR---- 259
G + D+ Y ++ C+ G + + + +EM KGI+P+ ++ + G + +
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 260 GKVLK----KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
GKVL +G+ V T++ + + CK A+ L+ M G++PN TY+ LI+
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 316 HCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
C +D ++A K++ M+ +GC P + Y TLI+ CK + A+SL E + K P
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
+LV G K AKELI GQ+ ++ T + L
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELI------GQVKEKFTRNVEL 398
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 126/265 (47%), Gaps = 15/265 (5%)
Query: 223 GLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK------------GIMPD 270
+++ +L ++ ++ I V + N L LF C K K+ GI PD
Sbjct: 130 NMLDHSLRVFRDLEKFEISRTVKSLNAL---LFACLVAKDYKEAKRVYIEMPKMYGIEPD 186
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
+ T++ ++ +C+ G + + ++ M R G++PN ++ +I+ +D+ + KV
Sbjct: 187 LETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLA 246
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
M +G TYN I CK KK +A +LL M++ G+ P+ T++ L+ GFC
Sbjct: 247 MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNED 306
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
AK+L M G PD Y ++ L K + A+SL +E + N +I
Sbjct: 307 DFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMK 366
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAK 475
+++GL ++++A+E ++ K
Sbjct: 367 SLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 10/233 (4%)
Query: 227 EALGLWSEMTGK-GIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAI 277
EA ++ EM GI+PD+ TYN + + ++ +KGI P+ +F +
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLM 228
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC 337
+ + E +++ M GV V TYN I + C + + ++A + D M+ G
Sbjct: 229 ISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGM 288
Query: 338 LPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKE 397
P+TVTY+ LIHG+C ++A L MVN+G PD + L+ CK G A
Sbjct: 289 KPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALS 348
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
L + +P +++GL K EA L ++ K R++ +++
Sbjct: 349 LCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQV-KEKFTRNVELWN 400
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 128/265 (48%), Gaps = 4/265 (1%)
Query: 270 DVHTFSAIVDNYCKEGMIARAERLM-GFMA-RVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
D FSA V+N ++ + L+ GF+ R ++ F ++++ + + + +++
Sbjct: 79 DRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIV-LYAQANMLDHSLR 137
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGF 386
V+ + + + N L+ K +A + EM G+ PD+ T+N ++ F
Sbjct: 138 VFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVF 197
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
C++G ++ +++ M++ G P+ ++ +++ G + E + ++ ++ +
Sbjct: 198 CESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGV 257
Query: 447 TIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
+ Y+I + LC + K+A+ G+ + G+K + TY+ ++ G C E ++A++L
Sbjct: 258 STYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKI 317
Query: 507 MEEKGCPPNDCTYNLFVQGLLRRGD 531
M +GC P+ Y + L + GD
Sbjct: 318 MVNRGCKPDSECYFTLIYYLCKGGD 342
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 88/201 (43%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P+++ + +I + + +++ S+V M GI+ +S +F ++I+ ++D V
Sbjct: 185 PDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKV 244
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L +M G+ + T + LC ++A L M G + N+ T+ +I+G C
Sbjct: 245 LAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCN 304
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+ A FK + RG K D Y ++ LCK G AL L E K P
Sbjct: 305 EDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSI 364
Query: 247 YNCLTRGLFHCSRGKVLKKGI 267
L GL S+ + K+ I
Sbjct: 365 MKSLVNGLAKDSKVEEAKELI 385
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 102/258 (39%), Gaps = 15/258 (5%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL-GIEADSFTFT 108
+D ++ F + +K L+ + K Y A + M + GIE D T+
Sbjct: 132 LDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYN 191
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
+I C + ++ M + G++P+ + +++G AE ++ + M +
Sbjct: 192 RMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDR 251
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
G T+ I LCK + A + G K + Y+ ++ C + EA
Sbjct: 252 GVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEA 311
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRG-----------KVLKKGIMPDVHTFSAI 277
L+ M +G +PD Y L +++ +G + ++K +P ++
Sbjct: 312 KKLFKIMVNRGCKPDSECYFTL---IYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSL 368
Query: 278 VDNYCKEGMIARAERLMG 295
V+ K+ + A+ L+G
Sbjct: 369 VNGLAKDSKVEEAKELIG 386
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 77/172 (44%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
PN F ++I+ ++ M G+ T+ I I LC+ ++ +
Sbjct: 220 PNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKAL 279
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
L M G++P+ VT + +++G C E + E+A L M G + +S + +I LCK
Sbjct: 280 LDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCK 339
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
G+ A+ K+ + + + ++++ L KD V EA L ++ K
Sbjct: 340 GGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK 391
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/523 (21%), Positives = 205/523 (39%), Gaps = 98/523 (18%)
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLT----TIVNGLCAEGN 154
G+ + F T +++ CR D V EP L T++ G +
Sbjct: 64 GLYQEHFFQTKLVSLFCRYGSVDEAARVF--------EPIDSKLNVLYHTMLKGFAKVSD 115
Query: 155 VEQALGLAMRM--------------------DEMGYRCNSYTHGAII-----------NG 183
+++AL +RM DE R HG ++ G
Sbjct: 116 LDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 184 LCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
L + + +KV R + D+ + I+ ++G+ AL + M + ++P
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 244 VVTYNCL---TRGLFHCSRGK-----VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
+T + L S GK ++ G V+ +A+VD Y K G + A +L
Sbjct: 236 FITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFD 295
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY----------- 344
M +E NV ++NS+I+A+ + ++AM ++ M+ +G P+ V+
Sbjct: 296 GM----LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLG 351
Query: 345 ------------------------NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
N+LI +CK K++D A S+ G++ ++ L +WN
Sbjct: 352 DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLV----SWN 407
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
A++ GF + G P+ A S M+ PD TY ++ + + A ++ + +
Sbjct: 408 AMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS 467
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
LD+++ + + ++D G + AR F + + V T+ M+ G G A
Sbjct: 468 CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER----HVTTWNAMIDGYGTHGFGKAA 523
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
+L +M++ PN T+ + G + K +MK
Sbjct: 524 LELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 130/620 (20%), Positives = 235/620 (37%), Gaps = 122/620 (19%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL- 98
+L + +D A+ FF +M + P + FT L+ K+ + + K +H L
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLL----KVCGDEAELRVGKEIHGLL 161
Query: 99 ---GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNV 155
G D F T + N + + + V M E D+V+ TIV G G
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRM----PERDLVSWNTIVAGYSQNGMA 217
Query: 156 EQALGL------------------------AMRMDEMGYRCNSYT-----------HGAI 180
AL + A+R+ +G + Y A+
Sbjct: 218 RMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTAL 277
Query: 181 INGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGI 240
++ K G+ A F + R +V + +++D+ ++ EA+ ++ +M +G+
Sbjct: 278 VDMYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 333
Query: 241 QPDVVT-----YNCLTRGLFHCSRGKVLKK-----GIMPDVHTFSAIVDNYCK------- 283
+P V+ + C G RG+ + K G+ +V ++++ YCK
Sbjct: 334 KPTDVSVMGALHACADLG--DLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTA 391
Query: 284 ---------EGMIARAERLMGF---------------MARVGVEPNVFTYNSLINAHCLQ 319
+++ ++GF M V+P+ FTY S+I A +
Sbjct: 392 ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA-IAE 450
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNT-LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
+ K ++ + CL V T L+ + K + A + M + +T T
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVT----T 506
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS-LYREL 437
WNA++ G+ G AA EL MQK P+ +T+ ++ + Y
Sbjct: 507 WNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMK 566
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR---- 493
E +++ + Y M+D L GRL +A +F + +K V Y M+ G C+
Sbjct: 567 ENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMP---VKPAVNVYGAML-GACQIHKN 622
Query: 494 EGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR-------GDISRSEKYLQLMKGKG 546
+ A + L ++ P+D Y++ + + R G + S L K G
Sbjct: 623 VNFAEKAAERLFELN-----PDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPG 677
Query: 547 FSADATTTELLINFFSGNKA 566
S E+ +FFSG+ A
Sbjct: 678 CSMVEIKNEVH-SFFSGSTA 696
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/286 (18%), Positives = 119/286 (41%), Gaps = 11/286 (3%)
Query: 287 IARAERLMGFMARV---GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
++ ++ + F R+ VEP V+ + L+ + +++ +++ ++ G
Sbjct: 113 VSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFA 172
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
L + + K +++++A + M + D+ +WN +V G+ + GM A E++ +M
Sbjct: 173 MTGLENMYAKCRQVNEARKVFDRMPER----DLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
+ P IT +L + ++ + D + I + ++D G L+
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
AR+ F G+ L+ +V ++ M+ + +A + M ++G P D + +
Sbjct: 289 TARQLFDGM----LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGAL 344
Query: 524 QGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNKADNT 569
GD+ R +L G + + LI+ + K +T
Sbjct: 345 HACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 157/393 (39%), Gaps = 58/393 (14%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADS--FTF 107
++ A+ F + N F L+ +VK A + ++ + G E +S
Sbjct: 97 LEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK-YCYGWEVNSRITAL 155
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLA----M 163
+++ LC+++R+DL V M G PD + ++ G C EG +E+A L
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD--------------- 208
R+ + G + + +++ LC G AI K+ +G K
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 209 -------------------VPV---YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+P Y+A+ L ++G + E + M KG +P
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 247 YNCLTRGLFHCSRGK------VLKKGIM-----PDVHTFSAIVDNYCKEGMIARAERLMG 295
Y + L C GK V+ K +M P V ++ ++ C +G A +
Sbjct: 336 YGAKVKAL--CRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 296 FMAR-VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
M++ V N TY +L++ C Q +A +V + M+ K P TY+ +I G C +
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+ +A+ L EMV++ + P+ W AL C
Sbjct: 454 DRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 200/474 (42%), Gaps = 42/474 (8%)
Query: 66 FPNIKEFTVLINLVVKMKHYTTAISLVK----RMHSLGIEADSFTFTIVINCLCRLSRTD 121
+P + ++L ++ K K+ TA+ L + R S G + + +I+ L + +R
Sbjct: 6 WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYG--HNGSVYATMIDILGKSNRVL 63
Query: 122 LGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAII 181
V+ M + E +++ G +E A+ L + E S + ++
Sbjct: 64 EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123
Query: 182 NGLCKVGNTSAAIGYFKK-VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGI 240
+ K AA F+K G + +M LC+ + A ++ EM +G
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 241 QPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM--- 297
PD +Y L +G +C EG + A L+ M
Sbjct: 184 YPDRDSYRILMKG---------------------------FCLEGKLEEATHLLYSMFWR 216
Query: 298 -ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG-W-CKI 354
++ G ++ Y L++A C ++ DA+++ ++ KG Y+ + G W
Sbjct: 217 ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSS 276
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
+ +++ LL E + +G P + +++A+ + G + +E++ M+ G P Y
Sbjct: 277 EGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIY 336
Query: 415 AIILDGLFKCHFYPEAVSLY-RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
+ L + EAVS+ +E+ + + + +Y++++ GLC G+ +A + +
Sbjct: 337 GAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMS 396
Query: 474 AK-GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
+ + TY +V GLCR+G +A Q++ +M K P TY++ ++GL
Sbjct: 397 KQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 12/268 (4%)
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
V + N L+ C ++ A +V+ M Y+GC P +Y L+ G+C K+++A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 362 SLLGEMV----NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
LL M KG DI + L+ C AG A E++ + + G + Y I
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRH----ITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
G ++ E + + L L R + YS M L G+L + E ++
Sbjct: 268 EAGHWESS--SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMR 325
Query: 474 AKGLKIDVFTYTIMVQGLCREGLLDDAEQLL-MDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
+KG + F Y V+ LCR G L +A ++ +M + C P YN+ ++GL G
Sbjct: 326 SKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKS 385
Query: 533 SRSEKYLQLM-KGKGFSADATTTELLIN 559
+ YL+ M K A+ T + L++
Sbjct: 386 MEAVGYLKKMSKQVSCVANEETYQTLVD 413
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 125/320 (39%), Gaps = 52/320 (16%)
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
++ ++D K + + ++ M E + S+I +++DA+ ++ S+
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL-----GEMVNKGLTPDICTWNALVGGFC 387
C+ +++++TL+ K +++ A + G VN +T N L+ C
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRIT----ALNLLMKVLC 163
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV----SLYRELEKMNLD 443
+ A ++ M G PDR +Y I++ G EA S++ + +
Sbjct: 164 QVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSG 223
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID----------------------- 480
I +Y I+LD LC G + DA E + KGLK
Sbjct: 224 EDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVK 283
Query: 481 --------------VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
+ +Y+ M L EG L + E++L+ M KG P Y V+ L
Sbjct: 284 RLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKAL 343
Query: 527 LRRGDISRSEKYL--QLMKG 544
R G + + + ++M+G
Sbjct: 344 CRAGKLKEAVSVINKEMMQG 363
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 157/393 (39%), Gaps = 58/393 (14%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADS--FTF 107
++ A+ F + N F L+ +VK A + ++ + G E +S
Sbjct: 97 LEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRK-YCYGWEVNSRITAL 155
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLA----M 163
+++ LC+++R+DL V M G PD + ++ G C EG +E+A L
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD--------------- 208
R+ + G + + +++ LC G AI K+ +G K
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 209 -------------------VPV---YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+P Y+A+ L ++G + E + M KG +P
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFI 335
Query: 247 YNCLTRGLFHCSRGK------VLKKGIM-----PDVHTFSAIVDNYCKEGMIARAERLMG 295
Y + L C GK V+ K +M P V ++ ++ C +G A +
Sbjct: 336 YGAKVKAL--CRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 296 FMAR-VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKI 354
M++ V N TY +L++ C Q +A +V + M+ K P TY+ +I G C +
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+ +A+ L EMV++ + P+ W AL C
Sbjct: 454 DRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/474 (20%), Positives = 200/474 (42%), Gaps = 42/474 (8%)
Query: 66 FPNIKEFTVLINLVVKMKHYTTAISLVK----RMHSLGIEADSFTFTIVINCLCRLSRTD 121
+P + ++L ++ K K+ TA+ L + R S G + + +I+ L + +R
Sbjct: 6 WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYG--HNGSVYATMIDILGKSNRVL 63
Query: 122 LGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAII 181
V+ M + E +++ G +E A+ L + E S + ++
Sbjct: 64 EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123
Query: 182 NGLCKVGNTSAAIGYFKK-VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGI 240
+ K AA F+K G + +M LC+ + A ++ EM +G
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 241 QPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM--- 297
PD +Y L +G +C EG + A L+ M
Sbjct: 184 YPDRDSYRILMKG---------------------------FCLEGKLEEATHLLYSMFWR 216
Query: 298 -ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHG-W-CKI 354
++ G ++ Y L++A C ++ DA+++ ++ KG Y+ + G W
Sbjct: 217 ISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSS 276
Query: 355 KKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY 414
+ +++ LL E + +G P + +++A+ + G + +E++ M+ G P Y
Sbjct: 277 EGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIY 336
Query: 415 AIILDGLFKCHFYPEAVSLY-RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
+ L + EAVS+ +E+ + + + +Y++++ GLC G+ +A + +
Sbjct: 337 GAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMS 396
Query: 474 AK-GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
+ + TY +V GLCR+G +A Q++ +M K P TY++ ++GL
Sbjct: 397 KQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGL 450
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 12/268 (4%)
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
V + N L+ C ++ A +V+ M Y+GC P +Y L+ G+C K+++A
Sbjct: 148 VNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEAT 207
Query: 362 SLLGEMV----NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
LL M KG DI + L+ C AG A E++ + + G + Y I
Sbjct: 208 HLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI 267
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRH----ITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
G ++ E + + L L R + YS M L G+L + E ++
Sbjct: 268 EAGHWESS--SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMR 325
Query: 474 AKGLKIDVFTYTIMVQGLCREGLLDDAEQLL-MDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
+KG + F Y V+ LCR G L +A ++ +M + C P YN+ ++GL G
Sbjct: 326 SKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKS 385
Query: 533 SRSEKYLQLM-KGKGFSADATTTELLIN 559
+ YL+ M K A+ T + L++
Sbjct: 386 MEAVGYLKKMSKQVSCVANEETYQTLVD 413
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 125/320 (39%), Gaps = 52/320 (16%)
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
++ ++D K + + ++ M E + S+I +++DA+ ++ S+
Sbjct: 48 VYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSL 107
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL-----GEMVNKGLTPDICTWNALVGGFC 387
C+ +++++TL+ K +++ A + G VN +T N L+ C
Sbjct: 108 HEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRIT----ALNLLMKVLC 163
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV----SLYRELEKMNLD 443
+ A ++ M G PDR +Y I++ G EA S++ + +
Sbjct: 164 QVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSG 223
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKID----------------------- 480
I +Y I+LD LC G + DA E + KGLK
Sbjct: 224 EDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVK 283
Query: 481 --------------VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
+ +Y+ M L EG L + E++L+ M KG P Y V+ L
Sbjct: 284 RLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKAL 343
Query: 527 LRRGDISRSEKYL--QLMKG 544
R G + + + ++M+G
Sbjct: 344 CRAGKLKEAVSVINKEMMQG 363
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 153/360 (42%), Gaps = 52/360 (14%)
Query: 171 RCNS--YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
RC S + +I A+ +K+ RG + A++ + + +
Sbjct: 157 RCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNG 216
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
++ E+ G D V+ + K + I P+ TF++++ ++ +EG
Sbjct: 217 YKMYREVFG----LDDVSVD----------EAKKMIGKIKPNATTFNSMMVSFYREGETE 262
Query: 289 RAERLMGFMAR-VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
ER+ M VG PNV++YN L+ A+C + M +A KV++ M +G + V YNT+
Sbjct: 263 MVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTM 322
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
I G C ++ KA L +M KG+ T+ LV G+CKAG + + M++ G
Sbjct: 323 IGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGF 382
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
D +T +++GL + + R + I+ D + RE
Sbjct: 383 EADGLTIEALVEGL---------------CDDRDGQRVVEAADIVKDAV---------RE 418
Query: 468 --FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQG 525
F+ Y ++V+ LC +G +D A + +M KG P+ TY F+ G
Sbjct: 419 AMFYPSRNC---------YELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 122/262 (46%), Gaps = 27/262 (10%)
Query: 320 DQMQD-AMKVYDSMI--YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
D+ +D +KV+ S+I Y C + ++ LI K++D A+ ++ ++ ++G+ I
Sbjct: 138 DEDEDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQI 197
Query: 377 CTWNALVGGFCKA-----GMPL-------------AAKELISTMQKHGQLPDRITYAIIL 418
T NAL+ + G + AK++I ++ P+ T+ ++
Sbjct: 198 STCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIK-----PNATTFNSMM 252
Query: 419 DGLFKCHFYPEAVSLYRELEK-MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
++ ++RE+E+ + ++ Y+++++ C+ G + +A + + ++ +G+
Sbjct: 253 VSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGV 312
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
D+ Y M+ GLC + A++L DM KG TY V G + GD+
Sbjct: 313 VYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLV 372
Query: 538 YLQLMKGKGFSADATTTELLIN 559
+ MK KGF AD T E L+
Sbjct: 373 VYREMKRKGFEADGLTIEALVE 394
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 107/228 (46%), Gaps = 5/228 (2%)
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKE 397
P+ T+N+++ + + + + + EM + G +P++ ++N L+ +C G+ A++
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 398 LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
+ M+ G + D + Y ++ GL +A L+R++ ++ Y +++G C
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYC 362
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC--REG--LLDDAEQLLMDMEEKGCP 513
G + + ++ KG + D T +V+GLC R+G +++ A+ + + E
Sbjct: 363 KAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFY 422
Query: 514 PNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
P+ Y L V+ L G + R+ M GKGF T I+ +
Sbjct: 423 PSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGY 470
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 6/171 (3%)
Query: 357 MDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH-GQLPDRITYA 415
+D+A ++G+ + P+ T+N+++ F + G + + M++ G P+ +Y
Sbjct: 231 VDEAKKMIGK-----IKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYN 285
Query: 416 IILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK 475
++++ EA ++ E++ + I Y+ M+ GLCS + A+E F + K
Sbjct: 286 VLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLK 345
Query: 476 GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
G++ TY +V G C+ G +D + +M+ KG + T V+GL
Sbjct: 346 GIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGL 396
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 109/267 (40%), Gaps = 25/267 (9%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHS-LGIEADSFTFTI 109
D +VD KM PN F ++ + + + M +G + +++ +
Sbjct: 228 DVSVDEAKKMIG-KIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNV 286
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
++ C V M G+ DIV T++ GLC+ V +A L M G
Sbjct: 287 LMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKG 346
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
C T+ ++NG CK G+ + + +++++ +GF+ D A+++ LC D
Sbjct: 347 IECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDD------- 399
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIAR 289
+ ++ + + + +F+ SR + + +V C++G + R
Sbjct: 400 ----RDGQRVVEAADIVKDAVREAMFYPSR------------NCYELLVKRLCEDGKMDR 443
Query: 290 AERLMGFMARVGVEPNVFTYNSLINAH 316
A + M G +P+ TY + I+ +
Sbjct: 444 ALNIQAEMVGKGFKPSQETYRAFIDGY 470
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 205/500 (41%), Gaps = 94/500 (18%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A ++P P + VLI ++ K + ++S+ KRM S GI AD FT+
Sbjct: 134 LDEAQTITENSEILHPLP----WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPS 189
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
VI L D + G G++E +
Sbjct: 190 VIKACAAL--LDFAY-----------------------GRVVHGSIEVS----------S 214
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+RCN Y A+I+ + G A F ++ R D + AI++ + + EA
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSER----DAVSWNAIINCYTSEEKLGEAF 270
Query: 230 GLWSEMTGKGIQPDVVTYN-----CLT---------------------------RGLFHC 257
L M G++ +VT+N CL GL C
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 258 SRGKVLKKG-----IMPDVHTFSAIVDNYCKE--GMIARAERL-MGFMARVGVEPNVF-T 308
S LK G ++ +FS +DN M +R L F+ VE N T
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
+NS+I+ ++ ++ + M+ G P+ +T +++ + ++ + ++
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYIL 450
Query: 369 NKGLTPD-ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
+ D + WN+LV + K+G +AAK + +M+K D++TY ++DG +
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR----DKVTYTSLIDGYGRLGKG 506
Query: 428 PEAVSLYRELEKMNLD-RHITIYSIMLDGLCSYGRL-KDAREFFSGLQ-AKGLKIDVFTY 484
A++ ++++++ + H+T+ +++ CS+ L ++ F+ ++ G+++ + Y
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVL--SACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 485 TIMVQGLCREGLLDDAEQLL 504
+ MV CR G LD A +
Sbjct: 565 SCMVDLYCRAGYLDKARDIF 584
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/500 (21%), Positives = 205/500 (41%), Gaps = 94/500 (18%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A ++P P + VLI ++ K + ++S+ KRM S GI AD FT+
Sbjct: 134 LDEAQTITENSEILHPLP----WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPS 189
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
VI L D + G G++E +
Sbjct: 190 VIKACAAL--LDFAY-----------------------GRVVHGSIEVS----------S 214
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
+RCN Y A+I+ + G A F ++ R D + AI++ + + EA
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSER----DAVSWNAIINCYTSEEKLGEAF 270
Query: 230 GLWSEMTGKGIQPDVVTYN-----CLT---------------------------RGLFHC 257
L M G++ +VT+N CL GL C
Sbjct: 271 KLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKAC 330
Query: 258 SRGKVLKKG-----IMPDVHTFSAIVDNYCKE--GMIARAERL-MGFMARVGVEPNVF-T 308
S LK G ++ +FS +DN M +R L F+ VE N T
Sbjct: 331 SHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLST 390
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
+NS+I+ ++ ++ + M+ G P+ +T +++ + ++ + ++
Sbjct: 391 WNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYIL 450
Query: 369 NKGLTPD-ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
+ D + WN+LV + K+G +AAK + +M+K D++TY ++DG +
Sbjct: 451 RRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR----DKVTYTSLIDGYGRLGKG 506
Query: 428 PEAVSLYRELEKMNLD-RHITIYSIMLDGLCSYGRL-KDAREFFSGLQ-AKGLKIDVFTY 484
A++ ++++++ + H+T+ +++ CS+ L ++ F+ ++ G+++ + Y
Sbjct: 507 EVALAWFKDMDRSGIKPDHVTMVAVL--SACSHSNLVREGHWLFTKMEHVFGIRLRLEHY 564
Query: 485 TIMVQGLCREGLLDDAEQLL 504
+ MV CR G LD A +
Sbjct: 565 SCMVDLYCRAGYLDKARDIF 584
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 157/337 (46%), Gaps = 18/337 (5%)
Query: 193 AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR 252
A G + V+ G D +YT ++ S K G V+ ++ +M+ G++ ++ T+ L
Sbjct: 486 ARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALID 545
Query: 253 GLFHCSR-GKVLK----------KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARV- 300
G C+R G+V K K + PD F+A++ + G + RA ++ M
Sbjct: 546 G---CARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAET 602
Query: 301 -GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK-GCLPSTVTYNTLIHGWCKIKKMD 358
++P+ + +L+ A C Q++ A +VY MI+K G + Y ++ K D
Sbjct: 603 HPIDPDHISIGALMKACCNAGQVERAKEVYQ-MIHKYGIRGTPEVYTIAVNSCSKSGDWD 661
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
A S+ +M K +TPD ++AL+ A M A ++ + G I+Y+ ++
Sbjct: 662 FACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLM 721
Query: 419 DGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLK 478
+ +A+ LY +++ + L I+ + ++ LC +L A E+ ++ GLK
Sbjct: 722 GACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLK 781
Query: 479 IDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
+ TY++++ R+ + + +LL + G PN
Sbjct: 782 PNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 148/327 (45%), Gaps = 18/327 (5%)
Query: 106 TFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
TF ++++ + VL L+ + G+ D TT+++ G V+ + +M
Sbjct: 469 TFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQM 528
Query: 166 DEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLV 225
G N +T GA+I+G + G + A G + + + K D V+ A++ + + G V
Sbjct: 529 SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 226 NEALGLWSEMTGK--GIQPDVVTYNCLTRGLFHCSRGKV----------LKKGI--MPDV 271
+ A + +EM + I PD ++ L + C+ G+V K GI P+V
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKAC--CNAGQVERAKEVYQMIHKYGIRGTPEV 646
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDS 331
+T + V++ K G A + M V P+ +++LI+ + +A +
Sbjct: 647 YTIA--VNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 332 MIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM 391
+G T++Y++L+ C K KA+ L ++ + L P I T NAL+ C+
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 392 PLAAKELISTMQKHGQLPDRITYAIIL 418
A E + ++ G P+ ITY++++
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLM 791
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 141/320 (44%), Gaps = 16/320 (5%)
Query: 70 KEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGL 129
K +T LI+ K + +M + G+EA+ TF +I+ R + F G+
Sbjct: 503 KLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGI 562
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGL--AMRMDEMGYRCNSYTHGAIINGLCKV 187
+ ++PD V +++ G V++A + M+ + + + GA++ C
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
G A ++ + G + VYT ++S K G + A ++ +M K + PD V +
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 248 NCLTRGLFHCSRGKVLKK--GIMPDVHT---------FSAIVDNYCKEGMIARAERLMGF 296
+ L H K+L + GI+ D + +S+++ C +A L
Sbjct: 683 SALIDVAGH---AKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEK 739
Query: 297 MARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKK 356
+ + + P + T N+LI A C +Q+ AM+ D + G P+T+TY+ L+ +
Sbjct: 740 IKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799
Query: 357 MDKAMSLLGEMVNKGLTPDI 376
+ + LL + G++P++
Sbjct: 800 FEVSFKLLSQAKGDGVSPNL 819
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 145/356 (40%), Gaps = 45/356 (12%)
Query: 240 IQPDVVTYN-----CLTRGLFHCSRGK---VLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
+ P + T+N C + +RG V + G+ D ++ ++ + K G +
Sbjct: 463 LNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMF 522
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
+ M+ GVE N+ T+ +LI+ Q+ A Y + K P V +N LI
Sbjct: 523 EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC 582
Query: 352 CKIKKMDKAMSLLGEMVNK--GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP 409
+ +D+A +L EM + + PD + AL+ C AG AKE+ + K+G
Sbjct: 583 GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRG 642
Query: 410 DRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD--------------- 454
Y I ++ K + A S+Y+++++ ++ +S ++D
Sbjct: 643 TPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGIL 702
Query: 455 ----------GLCSYGRL----------KDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
G SY L K A E + +++ L+ + T ++ LC
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG 762
Query: 495 GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD 550
L A + L +++ G PN TY++ + R+ D S K L KG G S +
Sbjct: 763 NQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPN 818
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 134/316 (42%), Gaps = 16/316 (5%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L+SS VDA + F++M+ N+ F LI+ + A + S
Sbjct: 508 LISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKN 567
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFK--MGLEPDIVTLTTIVNGLCAEGNVEQ 157
++ D F +I+ + D F VL M ++PD +++ ++ C G VE+
Sbjct: 568 VKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVER 627
Query: 158 ALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMD 217
A + + + G R + +N K G+ A +K ++ + D ++A++D
Sbjct: 628 AKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALID 687
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGI---------- 267
+++EA G+ + +GI+ ++Y+ L + C K KK +
Sbjct: 688 VAGHAKMLDEAFGILQDAKSQGIRLGTISYSSL---MGACCNAKDWKKALELYEKIKSIK 744
Query: 268 -MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
P + T +A++ C+ + +A + + +G++PN TY+ L+ A +D + +
Sbjct: 745 LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSF 804
Query: 327 KVYDSMIYKGCLPSTV 342
K+ G P+ +
Sbjct: 805 KLLSQAKGDGVSPNLI 820
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 78/180 (43%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+T+ +N K + A S+ K M + D F+ +I+ D F +L
Sbjct: 647 YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAK 706
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
G+ ++ ++++ C + ++AL L ++ + R T A+I LC+
Sbjct: 707 SQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLP 766
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A+ Y +++ G K + Y+ +M + + + L S+ G G+ P+++ C+T
Sbjct: 767 KAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCIT 826
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/517 (20%), Positives = 205/517 (39%), Gaps = 68/517 (13%)
Query: 69 IKEFTVLINLVVKMKHY-TTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVL 127
+++ LI++ + H +SL+ + D+F +++ +T +
Sbjct: 13 VQQIKTLISVACTVNHLKQIHVSLINHH----LHHDTFLVNLLLKRTLFFRQTKYSY--- 65
Query: 128 GLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKV 187
L+F P+I +++NG + L L + + + G + +T ++ +
Sbjct: 66 -LLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRA 124
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
+ I V GF DV T+++ G +N+A L+ E+ + VVT+
Sbjct: 125 SSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS----VVTW 180
Query: 248 NCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMAR 299
L G R K+++ G+ PD + ++ G + E ++ +M
Sbjct: 181 TALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEE 240
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK 359
+ ++ N F +L+N + +M+ A V+DSM+ K VT++T+I G+ +
Sbjct: 241 MEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEK----DIVTWSTMIQGYASNSFPKE 296
Query: 360 AMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKEL----ISTMQKHGQLPDRITYA 415
+ L +M+ + L PD + + GF + L A +L IS + +H L +
Sbjct: 297 GIELFLQMLQENLKPDQFS----IVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMAN 352
Query: 416 IILDGLFKCHFYPEAVSLYREL-------------------------------EKMNLDR 444
++D KC +++E+ EK+ +
Sbjct: 353 ALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQ-AKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
+ + +L G G ++D FF+ + LK V Y MV R G+LDDA +L
Sbjct: 413 DGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRL 472
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
+ DM + PN + + G D +E L+
Sbjct: 473 ICDMPMR---PNAIVWGALLSGCRLVKDTQLAETVLK 506
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/517 (21%), Positives = 199/517 (38%), Gaps = 89/517 (17%)
Query: 66 FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFC 125
FPNI + LIN V + + L + G+ FTF +V+ R S LG
Sbjct: 73 FPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGID 132
Query: 126 VLGLMFKMGLEPD-------------------------------IVTLTTIVNGLCAEGN 154
+ L+ K G D +VT T + +G G
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 155 VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
+A+ L +M EMG + +SY +++ VG+ + K +E + + V T
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKG 266
+++ K G + +A ++ M ++ D+VT++ + +G S K +L++
Sbjct: 253 LVNLYAKCGKMEKARSVFDSM----VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQEN 308
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM 326
+ PD + + + G + E + + R N+F N+LI+ + M
Sbjct: 309 LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGF 368
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
+V+ M K V N I G K + + ++ G+ G++PD T+ L+ G
Sbjct: 369 EVFKEMKEK----DIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGC 424
Query: 387 CKAGMPL----------AAKELISTMQKHGQLPDRITYAIILDGLFK------------- 423
AG+ L T++ +G + D A +LD ++
Sbjct: 425 VHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIV 484
Query: 424 -------CHFYPE---AVSLYRE---LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
C + A ++ +E LE N ++ + +I G GR +A E
Sbjct: 485 WGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVG----GRWDEAAEVRD 540
Query: 471 GLQAKGL-KIDVFTYTIMVQGLCREGLLDDAEQLLMD 506
+ KG+ KI +++ I ++G E L DD L D
Sbjct: 541 MMNKKGMKKIPGYSW-IELEGKVHEFLADDKSHPLSD 576
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 76/189 (40%), Gaps = 4/189 (2%)
Query: 374 PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSL 433
P+I +N+L+ GF + +L +++KHG T+ ++L + + L
Sbjct: 74 PNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDL 133
Query: 434 YRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR 493
+ + K + + + +L GRL DA + F + + V T+T + G
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS----VVTWTALFSGYTT 189
Query: 494 EGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
G +A L M E G P+ + + GD+ E ++ M+ ++
Sbjct: 190 SGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFV 249
Query: 554 TELLINFFS 562
L+N ++
Sbjct: 250 RTTLVNLYA 258
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:4962293-4965976 FORWARD LENGTH=1227
Length = 1227
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 114/558 (20%), Positives = 201/558 (36%), Gaps = 74/558 (13%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
V+ V F ++ P + + + + + A S+VKR+ G + +
Sbjct: 685 VEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNH 744
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I LC + F +L M P + + ++ LC A LA ++D
Sbjct: 745 LIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQID--- 801
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG---LVN 226
+SY H A+I GL G A + + G +Y + CK V
Sbjct: 802 ---SSYVHYALIKGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVE 858
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGM 286
E LGL +++K I+ V ++ V C E
Sbjct: 859 EVLGL------------------------------MVRKNIICSVKSYREYVRKMCLEPQ 888
Query: 287 IARAERLMGFMARVGVEP-NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYN 345
A L F+ P V YN LI + KV M +G LP T+N
Sbjct: 889 SLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFN 948
Query: 346 TLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH 405
L+HG+ ++ L M++KG+ P+ + A+ C G A +L M+
Sbjct: 949 FLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESK 1008
Query: 406 G-QLPDRITYAIILDGLFKCHFYPEAVSLYREL------------------EKMNLDRHI 446
G L + I++ L P+A + ++ NLD +
Sbjct: 1009 GWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAPNYDNIIKKLSDRGNLDIAV 1068
Query: 447 TIYSIML---------------DGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGL 491
+ + ML +GL Y +L A +F + + GL + T++ +V
Sbjct: 1069 HLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKF 1128
Query: 492 CREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADA 551
C + ++E+L+ M G P+ + + + ++ + +++M+ G+ D
Sbjct: 1129 CEACQVLESERLIKSMVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCGYEVDF 1188
Query: 552 TTTELLINFFSGNKADNT 569
T LI+ S +K T
Sbjct: 1189 ETHWSLISNMSSSKEKKT 1206
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/476 (20%), Positives = 193/476 (40%), Gaps = 57/476 (11%)
Query: 54 VDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFT-IVIN 112
+D+ A +N NI +I L+ + A L +++ +LG +S ++ I I
Sbjct: 242 LDWVETRAELNHM-NIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIG 300
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
+ DL L + ++ EPD+ I++ LC E+A ++ +G++
Sbjct: 301 YNEKQDFEDL----LSFIGEVKYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQ 356
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ T G +I C G+ A+ Y ++ +G+K DV Y AI+ L + GLW
Sbjct: 357 DEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRK-------GLW 409
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAER 292
HC ++ + G+M + TF +V YCK A+R
Sbjct: 410 QHT--------------------HCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKR 449
Query: 293 LMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV--YDSMIYK------GCLPSTVTY 344
++ M F Y LI A ++D + +A + +D + + +
Sbjct: 450 IVNKM---------FGY-GLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFF 499
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
+ L +G +D + ++++ + P+ +N+L+ + G A L+ M +
Sbjct: 500 DDLGNGLYLHTDLDAYEQRVNMVLDRSVLPE---FNSLIVRASEDGDLQTALRLLDEMAR 556
Query: 405 HGQLPDRITYAIILDGLFKCHFYPE-AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
GQ R ++A+++ L + ++SL + K+ + ++ C G +
Sbjct: 557 WGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEYCKKGFSR 616
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP--NDC 517
++ F + ID TYT +++ C++ L+D + + P NDC
Sbjct: 617 HSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDLNDC 672
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 175/447 (39%), Gaps = 57/447 (12%)
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCA-EGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
+L M + G + + ++ LCA ++ ++ L + ++ Y+ + T ++
Sbjct: 550 LLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETLNFLVQEY 609
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
CK G + + F K+ D YT+++ CK +N+ L +W PD+
Sbjct: 610 CKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQNDNWLPDL 669
Query: 245 VT----YNCLTRGLFHCSRGKVLKKGIMPD-VHTFSAIVDNYCKEGMIARAERLMGFMAR 299
+NCL R KG++ + V F + +Y ++++E F+ +
Sbjct: 670 NDCGDLWNCLVR------------KGLVEEVVQLFERVFISYP----LSQSEACRIFVEK 713
Query: 300 VGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDK 359
+ V + C+ A V + +GC+ YN LI G C KK
Sbjct: 714 LTV----------LGFSCI------AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSA 757
Query: 360 AMSLLGEMVNKGLTPDICTWNALVGGFC---KAGMPLAAKELISTMQKHGQLPDRITYAI 416
A ++L EM++K P + + L+ C KAG E I + H YA+
Sbjct: 758 AFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVH--------YAL 809
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
I GL +A + R + L + IY++M G C E + K
Sbjct: 810 I-KGLSLAGKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKN 868
Query: 477 LKIDVFTYTIMVQGLCRE----GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
+ V +Y V+ +C E + E LL+ + P YN+ + + R +
Sbjct: 869 IICSVKSYREYVRKMCLEPQSLSAISLKEFLLLG---ESNPGGVIIYNMLIFYMFRAKNH 925
Query: 533 SRSEKYLQLMKGKGFSADATTTELLIN 559
K L M+G+G D TT L++
Sbjct: 926 LEVNKVLLEMQGRGVLPDETTFNFLVH 952
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 155/388 (39%), Gaps = 70/388 (18%)
Query: 197 FKKVEGRGFKFDVPVYTAIMDS-LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF 255
+ V+ +GFK +P IM S L ++G+V E L EM G D + + G+F
Sbjct: 135 WASVQYQGFK-HLPQACEIMASMLIREGMVKEVELLLMEMERHG---DTM----VNEGIF 186
Query: 256 HC-----------SRGKVL------KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA 298
C SR V+ +KG++P + ++D + A R+
Sbjct: 187 -CDLIGKYVDDFDSRKAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWV 245
Query: 299 RVGVEPNVFTYNSL---INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
E N +S+ I CL ++Q+A + ++ GC+ ++ Y+ + G+ + +
Sbjct: 246 ETRAELNHMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQ 305
Query: 356 KMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYA 415
+ +S +GE+ PD+ N ++ C+
Sbjct: 306 DFEDLLSFIGEV---KYEPDVFVGNRILHSLCR--------------------------- 335
Query: 416 IILDGLFKCHFYPEAVSLY-RELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
F E +Y ELE + + + I++ C G +K A + S + +
Sbjct: 336 ---------RFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMS 386
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
KG K DV++Y ++ GL R+GL +L +M+E G + T+ + V G +
Sbjct: 387 KGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEE 446
Query: 535 SEKYLQLMKGKGFSADATTTELLINFFS 562
+++ + M G G + + L FS
Sbjct: 447 AKRIVNKMFGYGLIEASKVEDPLSEAFS 474
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 101/520 (19%), Positives = 191/520 (36%), Gaps = 59/520 (11%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
F +LI A+ + + S G + D +++ +++ L R C+L M
Sbjct: 361 FGILIGWCCYEGDIKRAVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMK 420
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+ G+ + T +V G C E+A + +M G S + VG
Sbjct: 421 ENGMMLSLSTFKIMVTGYCKARQFEEAKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDP 480
Query: 192 AAI-------GYFKKVE-----GRGFKFD------------------VPVYTAIMDSLCK 221
A+ F K E G G +P + +++ +
Sbjct: 481 LAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASE 540
Query: 222 DGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGI-----MP------D 270
DG + AL L EM G + ++ L R L C+ L+ I P D
Sbjct: 541 DGDLQTALRLLDEMARWGQKLSRRSFAVLMRSL--CASRAHLRVSISLLEKWPKLAYQLD 598
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
T + +V YCK+G ++ + M ++ + TY SLI C ++ + D + V+
Sbjct: 599 GETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWG 658
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKK--MDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+ LP L + C ++K +++ + L + V
Sbjct: 659 AAQNDNWLPDLNDCGDLWN--CLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTV 716
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G A ++ ++ G + ++ Y ++ GL C ++ + + L++M +HI
Sbjct: 717 LGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGL--CTEKKDSAA-FAILDEMLDKKHIPS 773
Query: 449 YS---IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLM 505
+++ LC + A + + + + +++GL G + DAE L
Sbjct: 774 LGSCLMLIPRLCRANKAGTAFNLAEQIDSS------YVHYALIKGLSLAGKMLDAENQLR 827
Query: 506 DMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
M G + YN+ QG + + + E+ L LM K
Sbjct: 828 IMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRK 867
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 123/580 (21%), Positives = 242/580 (41%), Gaps = 112/580 (19%)
Query: 65 PFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGF 124
P ++ +T +I +K+ A L R+ S + T+T +++ R +
Sbjct: 73 PERDVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQ----L 125
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
+ ++F+ E ++V+ T+++G G +++AL L DEM R N + +++ L
Sbjct: 126 SIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALEL---FDEMPER-NIVSWNSMVKAL 181
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
+ G A+ F+++ R DV +TA++D L K+G V+EA L+ M + I
Sbjct: 182 VQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI---- 233
Query: 245 VTYNCLTRGLFHCSRGKVLKK--GIMP--DVHTFSAIVDNYCKEGMIARAERLMGFMARV 300
+++N + G +R + +MP D +++ ++ + + + +A L M
Sbjct: 234 ISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMP-- 291
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL-PSTVTYNT----------LIH 349
E NV ++ ++I + + ++A+ V+ M+ G + P+ TY + L+
Sbjct: 292 --EKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 350 GWCKIKKMDKAMSLLGEMVNKGL-----------------------TPDICTWNALVGGF 386
G + + K++ E+V L D+ +WN+++ +
Sbjct: 350 GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVY 409
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH---FYPEAVSLYRELEK-MNL 442
G A E+ + M+KHG P +TY L+ LF C + + +++L + +L
Sbjct: 410 AHHGHGKEAIEMYNQMRKHGFKPSAVTY---LNLLFACSHAGLVEKGMEFFKDLVRDESL 466
Query: 443 DRHITIYSIMLDGLCSYGRLKD------------AREFFSGLQA---------------- 474
Y+ ++D GRLKD +R F+ + +
Sbjct: 467 PLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVK 526
Query: 475 KGLKI---DVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPND-CTY-------NLFV 523
K L+ D TY +M G ++A ++ M M+EKG C++ +LFV
Sbjct: 527 KVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFV 586
Query: 524 QGLLRRGDISRSEKYL-----QLMKGKGFSADATTTELLI 558
G + L ++ K K ++DA E L+
Sbjct: 587 VGDKSHPQFEALDSILSDLRNKMRKNKNVTSDAEEAEFLV 626
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 124/265 (46%), Gaps = 27/265 (10%)
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
P V LI C ++ +A K++D + + VT+ +I G+ K+ M +A L
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFDGLPER----DVVTWTHVITGYIKLGDMREAREL 99
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR--ITYAIILDGL 421
+ ++ ++ TW A+V G+ ++ A+ L M P+R +++ ++DG
Sbjct: 100 FDRVDSR---KNVVTWTAMVSGYLRSKQLSIAEMLFQEM------PERNVVSWNTMIDGY 150
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
+ +A+ L+ E+ +R+I ++ M+ L GR+ +A F + + DV
Sbjct: 151 AQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DV 202
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQL 541
++T MV GL + G +D+A +L M E+ N ++N + G + I +++ Q+
Sbjct: 203 VSWTAMVDGLAKNGKVDEARRLFDCMPER----NIISWNAMITGYAQNNRIDEADQLFQV 258
Query: 542 MKGKGFSADATTTELLINFFSGNKA 566
M + F++ T I NKA
Sbjct: 259 MPERDFASWNTMITGFIRNREMNKA 283
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 28/338 (8%)
Query: 180 IINGLCKVGNTS-AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
I+ LC N + A+ +K D Y ++ G +N A L EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 239 GIQPDVVTYNCLTRGLFHCSRGKV----------LKKGIMPDVHTFSAIVDNYCKEGMIA 288
G+ PDV+TY + G +C+ GK+ K + + T+S I++ CK G +
Sbjct: 195 GLYPDVITYTSMING--YCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDME 252
Query: 289 RAERLMGFMARVG----VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
RA L+ M + + PN TY +I A C + ++++A+ V D M +GC+P+ VT
Sbjct: 253 RALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTA 312
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNK-----GLTPDICTWNALVGGFCKAGMPLAAKELI 399
LI G + + D+ + L ++++K G++ C +A V + A+++
Sbjct: 313 CVLIQG---VLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVS-LIRMKRWEEAEKIF 368
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI--TIYSIMLDGLC 457
M G PD + + + L Y + LY+E+EK ++ I I++++L GLC
Sbjct: 369 RLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDVKSTIDSDIHAVLLLGLC 428
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
G +A + + K +++ V +++ L + G
Sbjct: 429 QQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 147/341 (43%), Gaps = 17/341 (4%)
Query: 66 FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFC 125
F N+K +++ L + A+ ++++ + AD+ + +VI ++
Sbjct: 127 FVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADM 186
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
++ M +GL PD++T T+++NG C G ++ A LA M + NS T+ I+ G+C
Sbjct: 187 LIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVC 246
Query: 186 KVGNTSAAIGYFKKVE----GRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
K G+ A+ ++E G + YT ++ + C+ V EAL + M +G
Sbjct: 247 KSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCM 306
Query: 242 PDVVTYNCLTRGLFHCSR---------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAER 292
P+ VT L +G+ K++K G + FS+ + + AE+
Sbjct: 307 PNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEK 366
Query: 293 LMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV---TYNTLIH 349
+ M GV P+ + + CL ++ D +Y I K + ST+ + L+
Sbjct: 367 IFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQE-IEKKDVKSTIDSDIHAVLLL 425
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
G C+ +A L M++K + + ++ K G
Sbjct: 426 GLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKKTG 466
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 36/235 (15%)
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
TV YN +I + ++ A L+ EM GL PD+ T+ +++ G+C AG A L
Sbjct: 165 TVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAK 224
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M KH + + +TY+ IL+G+ K A+ L E+EK DG
Sbjct: 225 EMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKE-------------DG----- 266
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
GL + + TYT+++Q C + +++A +L M +GC PN T
Sbjct: 267 ---------GGL----ISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTAC 313
Query: 521 LFVQGLLRRGDISRSEKYL--QLMKGKGFSAD---ATTTELLINFFSGNKADNTF 570
+ +QG+L + ++ L +L+K G S ++ T LI +A+ F
Sbjct: 314 VLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIF 368
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 392 PLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
P K +I + +K + T I+L + + EA+ + R+ + N+ Y++
Sbjct: 111 PDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNL 170
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKG 511
++ G L A + GL DV TYT M+ G C G +DDA +L +M +
Sbjct: 171 VIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHD 230
Query: 512 CPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK----GKGFSADATTTELLINFF 561
C N TY+ ++G+ + GD+ R+ + L M+ G S +A T L+I F
Sbjct: 231 CVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAF 284
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 138/283 (48%), Gaps = 13/283 (4%)
Query: 243 DVVTYNCLTRGLFHCSRG---------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
+V+ YN +T +F S+ ++L++GI PD TF+ I+ + G+ RA
Sbjct: 174 EVILYN-VTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEW 232
Query: 294 MGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCK 353
M+ G EP+ T ++I+A+ + A+ +YD + VT++TLI +
Sbjct: 233 FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV 292
Query: 354 IKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRIT 413
D +++ EM G+ P++ +N L+ +A P AK + + +G P+ T
Sbjct: 293 SGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWST 352
Query: 414 YAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD-AREFFSGL 472
YA ++ + + +A+++YRE+++ L + +Y+ +L +C+ R D A E F +
Sbjct: 353 YAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLL-SMCADNRYVDEAFEIFQDM 411
Query: 473 Q-AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
+ + D +T++ ++ G + +AE L+ M E G P
Sbjct: 412 KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP 454
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 129/307 (42%), Gaps = 15/307 (4%)
Query: 45 RDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADS 104
R K ++ + F++M P+ FT +I+ + A+ ++M S G E D+
Sbjct: 186 RKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDN 245
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR 164
T +I+ R D+ + D VT +T++ GN + L +
Sbjct: 246 VTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEE 305
Query: 165 MDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGL 224
M +G + N + +I+ + + A +K + GF + Y A++ + +
Sbjct: 306 MKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARY 365
Query: 225 VNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM------------PDVH 272
++AL ++ EM KG+ V+ YN L L C+ + + + PD
Sbjct: 366 GDDALAIYREMKEKGLSLTVILYNTL---LSMCADNRYVDEAFEIFQDMKNCETCDPDSW 422
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
TFS+++ Y G ++ AE + M G EP +F S+I + Q+ D ++ +D +
Sbjct: 423 TFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQV 482
Query: 333 IYKGCLP 339
+ G P
Sbjct: 483 LELGITP 489
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 123/269 (45%), Gaps = 9/269 (3%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M + G++PD T TTI++ G ++A+ +M G ++ T A+I+ + GN
Sbjct: 201 MLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 260
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
A+ + + ++ D ++ ++ G + L ++ EM G++P++V YN
Sbjct: 261 VDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNR 320
Query: 250 LTRGLFHCSR---GKVLKK-----GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
L + R K++ K G P+ T++A+V Y + A + M G
Sbjct: 321 LIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKG 380
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY-KGCLPSTVTYNTLIHGWCKIKKMDKA 360
+ V YN+L++ + +A +++ M + C P + T+++LI + ++ +A
Sbjct: 381 LSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEA 440
Query: 361 MSLLGEMVNKGLTPDICTWNALVGGFCKA 389
+ L +M G P + +++ + KA
Sbjct: 441 EAALLQMREAGFEPTLFVLTSVIQCYGKA 469
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 113/526 (21%), Positives = 217/526 (41%), Gaps = 29/526 (5%)
Query: 59 KMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLS 118
K+ NP N + LI+ K A +L M S GI+ + +T V+ L
Sbjct: 80 KLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLV 139
Query: 119 RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDE-MGYRCNSYTH 177
G + G K G + D+ +VNGL A + + A + E M N+ T
Sbjct: 140 LLLRGEQIHGHTIKTGFDLDV----NVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTW 195
Query: 178 GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTG 237
+++ G + G AI F+ + G + + + +++ + + + +
Sbjct: 196 TSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK 255
Query: 238 KGIQPDVVTYNCLTRGLFHC---SRGKVLKKGI-MPDVHTFSAIVDNYCKEGMIARAERL 293
G + ++ + L C + L +G+ + DV ++++++ ++G+I A +
Sbjct: 256 SGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSM 315
Query: 294 MGFMARVGVEPNVFTYNSLINAHCL-QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWC 352
G M ++ + FT S++N L + +M+ A + ++ G + N L+ +
Sbjct: 316 FGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYA 375
Query: 353 KIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRI 412
K MD A+ + M+ K D+ +W ALV G G A +L M+ G PD+I
Sbjct: 376 KRGIMDSALKVFEGMIEK----DVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKI 431
Query: 413 TYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGL 472
A +L + ++ K +++ + ++ G L+DA F+ +
Sbjct: 432 VTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSM 491
Query: 473 QAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE-KGCPPNDCTYNLFVQGLLRRGD 531
+ + D+ T+T ++ G + GLL+DA++ M G P Y + R GD
Sbjct: 492 EIR----DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGD 547
Query: 532 ISRSEKYLQLMKGKGFSADATTTELLI-------NFFSGNKADNTF 570
+ E+ L M+ DAT + ++ N +G +A T
Sbjct: 548 FVKVEQLLHQME---VEPDATVWKAILAASRKHGNIENGERAAKTL 590
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 140/326 (42%), Gaps = 19/326 (5%)
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR----GKVLKKGIMPD 270
++ L K G V+EA ++ +M + D T+N + + R K+ + + +
Sbjct: 34 LLGDLSKSGRVDEARQMFDKMP----ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKN 89
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
+++A++ YCK G A L M G++PN +T S++ + +++
Sbjct: 90 TISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHG 149
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
I G N L+ + + K++ +A L M +G ++ TW +++ G+ + G
Sbjct: 150 HTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM--EGEKNNV-TWTSMLTGYSQNG 206
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
A E +++ G ++ T+ +L V ++ + K +I + S
Sbjct: 207 FAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQS 266
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
++D ++ AR G++ DV ++ M+ G R+GL+ +A + M E+
Sbjct: 267 ALIDMYAKCREMESARALLEGMEVD----DVVSWNSMIVGCVRQGLIGEALSMFGRMHER 322
Query: 511 GCPPNDCTYNLFVQGLLRRGDISRSE 536
+D T + +L +SR+E
Sbjct: 323 DMKIDDFT----IPSILNCFALSRTE 344
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/304 (18%), Positives = 125/304 (41%), Gaps = 17/304 (5%)
Query: 268 MP--DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
MP D T++ ++ Y ++ AE+L R N ++N+LI+ +C +A
Sbjct: 54 MPERDEFTWNTMIVAYSNSRRLSDAEKLF----RSNPVKNTISWNALISGYCKSGSKVEA 109
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
++ M G P+ T +++ + + + + G + G D+ N L+
Sbjct: 110 FNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAM 169
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH 445
+ + A+ L TM+ + +T+ +L G + F +A+ +R+L + +
Sbjct: 170 YAQCKRISEAEYLFETMEGE---KNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSN 226
Query: 446 ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ--GLCREGLLDDAEQL 503
+ +L S + + + G K +++ + ++ CRE ++ A L
Sbjct: 227 QYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCRE--MESARAL 284
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSG 563
L ME + ++N + G +R+G I + M + D T ++N F+
Sbjct: 285 LEGME----VDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFAL 340
Query: 564 NKAD 567
++ +
Sbjct: 341 SRTE 344
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 109/529 (20%), Positives = 215/529 (40%), Gaps = 22/529 (4%)
Query: 44 MRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEAD 103
+RD +T + +F+ K + K LI+ +V K + +S+ + + D
Sbjct: 82 LRDPETRKLSSEFYEKAKENSELRTTKH---LISYLVSSKSWDLLVSVCEDLREHKALPD 138
Query: 104 SFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAM 163
T + +I R + + C+L + F+ + + G + +
Sbjct: 139 GQTCSNLIRSCIRDRKFRITHCLLSV-FRSDKSLAVSASDAAMKGFNKLQMYSSTIQVFD 197
Query: 164 RMDE-MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF----DVPVYTAIMDS 218
R+ + +G + + I+ K+G + F++ + + F +YT + S
Sbjct: 198 RLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSS 257
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR----GKVLK----KGIMPD 270
L K G EAL + EM KGI Y+ L R K+ K K ++ D
Sbjct: 258 LAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKD 317
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
+V Y +EG + ++ M + ++ +++N Q +A+KVY+
Sbjct: 318 PEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYE 377
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
+ + C VTY I+ +C+++K +KA L EMV KG + ++ ++ + K
Sbjct: 378 WAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTR 437
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
A L++ M++ G P+ Y ++D + A +++E+++ + Y+
Sbjct: 438 RLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYT 497
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
M+ L+ E + + KID IMV + +D+ +LL DM+ +
Sbjct: 498 SMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVE 557
Query: 511 GCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
G + Y+ + LR ++ ++LQ + F A T+T N
Sbjct: 558 GTRLDARLYSSALNA-LRDAGLNSQIRWLQ----ESFDAAQTSTSKYSN 601
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 6/245 (2%)
Query: 324 DAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL--TPDICTWNA 381
+A++V + M KG S+ Y+ LI + + +++ L E K L P++C
Sbjct: 266 EALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCL--K 323
Query: 382 LVGGFCKAGMPLAAKELISTMQKHG-QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
+V + + G E+++ M+K ++ D I AI+ +G K + EAV +Y K
Sbjct: 324 VVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIV-NGFSKQRGFAEAVKVYEWAMKE 382
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
+ Y+I ++ C + A F + KG V Y+ ++ + L DA
Sbjct: 383 ECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDA 442
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
+L+ M+++GC PN YN + R D+ R+EK + MK D + +I+
Sbjct: 443 VRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISA 502
Query: 561 FSGNK 565
++ +K
Sbjct: 503 YNRSK 507
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 112/227 (49%), Gaps = 3/227 (1%)
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
+N L+ +C ++M +A S+ E ++ PD+ T N L+ GF +AG A + M
Sbjct: 179 FNILLRAFCTEREMKEARSIF-EKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
K G P+ +TY I +DG K + EA+ L+ ++++++ D + I + ++ G
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
AR+ F + +GL D Y ++ L + G + A +++ +MEEKG P+ T++
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 524 QGLLRRGDISRSE--KYLQLMKGKGFSADATTTELLINFFSGNKADN 568
G+++ + + +Y Q MK + T +L+ F N N
Sbjct: 358 IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVN 404
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 11/289 (3%)
Query: 69 IKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLG 128
+ EF +L+ + A S+ +++HS D T I++
Sbjct: 176 VDEFNILLRAFCTEREMKEARSIFEKLHS-RFNPDVKTMNILLLGFKEAGDVTATELFYH 234
Query: 129 LMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVG 188
M K G +P+ VT ++G C + N +AL L MD + + +I+G
Sbjct: 235 EMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVAR 294
Query: 189 NTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN 248
N A F ++ RG D Y A+M SL K G V+ A+ + EM KGI+PD VT++
Sbjct: 295 NKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFH 354
Query: 249 CLTRGLFHCSR----------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA 298
+ G+ K+ ++ ++P T ++ +C G + L +M
Sbjct: 355 SMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYML 414
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
G P+ L A C + + DA + + +G S Y L
Sbjct: 415 EKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRML 463
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 139/350 (39%), Gaps = 35/350 (10%)
Query: 184 LCKV---GNTSAAIGYFKKVEGRGF--KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
LCK+ G+ + F K+E F KF V + ++ + C + + EA ++ ++ +
Sbjct: 146 LCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSR 205
Query: 239 GIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA 298
PDV T N L G + + G + E M
Sbjct: 206 -FNPDVKTMNILLLG---------------------------FKEAGDVTATELFYHEMV 237
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
+ G +PN TY I+ C + +A+++++ M + TLIHG +
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
KA L E+ +GLTPD +NAL+ K G A +++ M++ G PD +T+ +
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 419 DGLFKCHFY--PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
G+ K + Y+++++ +L +++ C G + + + + KG
Sbjct: 358 IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGL 526
++ LC +DA + E+G ++ Y + L
Sbjct: 418 YCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSL 467
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 137/307 (44%), Gaps = 8/307 (2%)
Query: 261 KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARV-GVEPNVFTYNSLINAHCLQ 319
++L++G+ P V ++A++ Y + +I A ++ M +P+VFTY++L+ A
Sbjct: 149 EMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDA 208
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM-VNKGLTPDICT 378
Q +Y M + P+TVT N ++ G+ ++ + D+ +L +M V+ PD+ T
Sbjct: 209 SQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWT 268
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
N ++ F G + + G P+ T+ I++ K Y + S+ +
Sbjct: 269 MNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMR 328
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
K+ + Y+ +++ G K+ F ++++G+K D T+ ++ G GL
Sbjct: 329 KLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLFH 388
Query: 499 ---DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTE 555
+ QL E P N YN + + D+ E+ MK + D+ T E
Sbjct: 389 KVISSVQLAAKFE---IPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFE 445
Query: 556 LLINFFS 562
+++ +
Sbjct: 446 IMVEAYE 452
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 164/385 (42%), Gaps = 17/385 (4%)
Query: 139 IVTLTTIVNGLCAEGNVEQALGL-AMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYF 197
+ T+T ++ L A+ QAL + M ++ Y+ T+ ++ L K G + A F
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTG-KGIQPDVVTYNCLTRGLFH 256
++ G + V +YTA++ + + L+++A + +M QPDV TY+ L +
Sbjct: 148 DEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVD 207
Query: 257 CSRGKVL--------KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM-ARVGVEPNVF 307
S+ ++ ++ I P+ T + ++ Y + G + E+++ M +P+V+
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVW 267
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
T N +++ ++ Y+ G P T T+N LI + K + DK S++ M
Sbjct: 268 TMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
T+N ++ F G + M+ G D T+ +++G +
Sbjct: 328 RKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLF 387
Query: 428 PEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIM 487
+ +S + K + + Y+ ++ L + + ++ + D T+ IM
Sbjct: 388 HKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIM 447
Query: 488 VQGLCREGL------LDDAEQLLMD 506
V+ +EG+ L+ Q LMD
Sbjct: 448 VEAYEKEGMNDKIYYLEQERQKLMD 472
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 114/282 (40%), Gaps = 35/282 (12%)
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM-IYKGCLPST 341
K G RA++L M G+EP V Y +L+ A+ + + DA + D M + C P
Sbjct: 136 KSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDV 195
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
TY+TL+ + D SL EM + +TP+ T N ++ G+ + G
Sbjct: 196 FTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGR-------FDQ 248
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
M+K ++ D L P+ ++ +I+L + G+
Sbjct: 249 MEK-----------VLSDMLVSTACKPDVWTM----------------NIILSVFGNMGK 281
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNL 521
+ ++ + G++ + T+ I++ ++ + D ++ M + P TYN
Sbjct: 282 IDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNN 341
Query: 522 FVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSG 563
++ GD E M+ +G AD T LIN ++
Sbjct: 342 IIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYAN 383
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 163/419 (38%), Gaps = 47/419 (11%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVV--KMKHYTTAISLVKRMH 96
E LS + K A++ F+ M F KE T + LV+ K A L M
Sbjct: 93 ETLSDLIAKKQWLQALEVFD-MLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEML 151
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGL-EPDIVTLTTIVNGLCAEGNV 155
G+E +T ++ R + D F +L M +PD+ T +T++
Sbjct: 152 EEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQF 211
Query: 156 EQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAI 215
+ L MDE N+ T +++G +VG +FD
Sbjct: 212 DLVDSLYKEMDERLITPNTVTQNIVLSGYGRVG-----------------RFDQ------ 248
Query: 216 MDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR--------GLFHCSRGKVLKKGI 267
M+ + D LV+ A +PDV T N + + K GI
Sbjct: 249 MEKVLSDMLVSTA-----------CKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGI 297
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
P+ TF+ ++ +Y K+ M + +M +M ++ TYN++I A ++
Sbjct: 298 EPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEL 357
Query: 328 VYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFC 387
+D M +G T T+ LI+G+ K +S + + + +NA++
Sbjct: 358 TFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACA 417
Query: 388 KAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHI 446
KA + + + M++ + D T+ I+++ K + L +E +K+ +DR +
Sbjct: 418 KADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEKEGMNDKIYYLEQERQKL-MDRTV 475
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 172/381 (45%), Gaps = 24/381 (6%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ V ++M + NI + +++ + ++ A+ + +++H LG D T +
Sbjct: 198 LEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSS 257
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGL--AMRMDE 167
V+ + ++G + G + K GL D ++ +++ G+V + L M E
Sbjct: 258 VLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMME 317
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
G CN+Y I GL + G A+ F+ + + + +V +T+I+ ++G E
Sbjct: 318 AGV-CNAY-----ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 228 ALGLWSEMTGKGIQPDVVTY--------NCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVD 279
AL L+ EM G++P+ VT N G + G ++ ++ +VH SA++D
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
Y K G I ++ + M N+ +NSL+N + + ++ M +++S++ P
Sbjct: 432 MYAKCGRINLSQIVFNMMPT----KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKEL 398
+++ +L+ ++ D+ M + G+ P + ++ +V +AG A +L
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547
Query: 399 ISTMQKHGQLPDRITYAIILD 419
I M PD + +L+
Sbjct: 548 IKEMPFE---PDSCVWGALLN 565
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/513 (19%), Positives = 208/513 (40%), Gaps = 53/513 (10%)
Query: 65 PFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADS---------------FTFTI 109
P P I F+ LI + K K +T +I + RM S G+ DS F
Sbjct: 77 PDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGK 136
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGL----------------EPDIVTLTTIVNGLCAEG 153
I+C+ +S D+ V G MF M + + D+VT + ++ +G
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKG 196
Query: 154 NVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
+E+ + + M+ G N + I++G + G A+ F+K+ GF D +
Sbjct: 197 CLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS 256
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT 273
+++ S+ ++N + + +G+ D C+ + GI+ +
Sbjct: 257 SVLPSVGDSEMLNMGRLIHGYVIKQGLLKD----KCVISAMIDMYGKSGHVYGIISLFNQ 312
Query: 274 F--------SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQ-D 324
F +A + + G++ +A + +E NV ++ S+I A C Q+ +
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSII-AGCAQNGKDIE 371
Query: 325 AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
A++++ M G P+ VT +++ I + S G V L ++ +AL+
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALID 431
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
+ K G + +++ M L + + +++G E +S++ L + L
Sbjct: 432 MYAKCGR-INLSQIVFNMMPTKNL---VCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAK-GLKIDVFTYTIMVQGLCREGLLDDAEQL 503
++ +L G + ++F + + G+K + Y+ MV L R G L +A L
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547
Query: 504 LMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE 536
+ +M + P+ C + + + ++ +E
Sbjct: 548 IKEMPFE---PDSCVWGALLNSCRLQNNVDLAE 577
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 374 PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSL 433
P I ++++L+ KA + + + S M HG +PD + +L LFK A +
Sbjct: 79 PTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPD----SHVLPNLFKVCAELSAFKV 134
Query: 434 YRELEKMN----LDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
+++ ++ LD + M GR+ DAR+ F + K DV T + ++
Sbjct: 135 GKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLC 190
Query: 490 GLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
R+G L++ ++L +ME G N ++N + G R G + Q + GF
Sbjct: 191 AYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCP 250
Query: 550 DATTT 554
D T
Sbjct: 251 DQVTV 255
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 133/281 (47%), Gaps = 10/281 (3%)
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+MG+ + T +++ LC G V+ A L M + + + +++ +CK ++S
Sbjct: 172 RMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSS 231
Query: 192 A--AIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
IGY + + F + YT +M L + G E + + ++M ++PD+V Y
Sbjct: 232 CFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTI 291
Query: 250 LTRGLF----HCSRGKVLKKGIM----PDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
+ +G+ + K+ + ++ PDV+T++ ++ CK+ I A ++M M ++G
Sbjct: 292 VLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG 351
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
EPNV TYN LI A + A ++ M G ++ T++ +I + ++ ++ A
Sbjct: 352 SEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAH 411
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTM 402
LL E N + ++ C+ G+ A EL++ +
Sbjct: 412 GLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHL 452
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 138/294 (46%), Gaps = 44/294 (14%)
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
+ +I A+ ++++A++V+ + C+PS T N L+ + ++ ++ L+ E++
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQ---SLELVPEIL 167
Query: 369 NK----GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL------ 418
K G+ + T+ L+ C+ G A EL+ M + + D Y+ +L
Sbjct: 168 VKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKH 227
Query: 419 ------------DGLFKCHFYP-------------------EAVSLYRELEKMNLDRHIT 447
+ L K F P E VS+ +++ ++ +
Sbjct: 228 KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLV 287
Query: 448 IYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
Y+I+L G+ + A + F L GL DV+TY + + GLC++ ++ A +++ M
Sbjct: 288 CYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSM 347
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ G PN TYN+ ++ L++ GD+SR++ + M+ G + ++ T +++I+ +
Sbjct: 348 NKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 161/374 (43%), Gaps = 66/374 (17%)
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVP--VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
++ N S+ + + + E KFD P ++ ++ + G + EA+ ++ ++ P
Sbjct: 87 QLENISSVLYHLEVSE----KFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPS 142
Query: 244 VVTYNCLTRGLFHCSRG---------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLM 294
T N L L + K + G+ + TF ++D C+ G + A L+
Sbjct: 143 AYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELV 202
Query: 295 GFMARVGVEPNVFTYNSLINAHC-------------LQD--------------------- 320
+M++ V + Y+ L+++ C L+D
Sbjct: 203 RYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLV 262
Query: 321 ---QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
+ ++ + V + M P V Y ++ G + KA L E++ GL PD+
Sbjct: 263 EGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVY 322
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
T+N + G CK A +++S+M K G P+ +TY I++ L K A +L++E+
Sbjct: 323 TYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEM 382
Query: 438 EKMNLDRHITIYSIMLDG-------LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQG 490
E ++R+ + IM+ +C++G L++A F + K +I+ ++
Sbjct: 383 ETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEA--FNMNVFVKSSRIEE-----VISR 435
Query: 491 LCREGLLDDAEQLL 504
LC +GL+D A +LL
Sbjct: 436 LCEKGLMDQAVELL 449
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 106/236 (44%), Gaps = 2/236 (0%)
Query: 299 RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMD 358
R+GV T+ LI+A C ++ A ++ M + Y+ L+ CK K
Sbjct: 172 RMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSS 231
Query: 359 --KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+ L ++ +P + + ++ + G +++ M+ PD + Y I
Sbjct: 232 CFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTI 291
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKG 476
+L G+ YP+A L+ EL + L + Y++ ++GLC ++ A + S + G
Sbjct: 292 VLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLG 351
Query: 477 LKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
+ +V TY I+++ L + G L A+ L +ME G N T+++ + + ++
Sbjct: 352 SEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEV 407
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 92/187 (49%), Gaps = 8/187 (4%)
Query: 54 VDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINC 113
V N+M P++ +T+++ V+ + Y A L + LG+ D +T+ + IN
Sbjct: 271 VSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYING 330
Query: 114 LCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCN 173
LC+ + + ++ M K+G EP++VT ++ L G++ +A L M+ G N
Sbjct: 331 LCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRN 390
Query: 174 SYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA----IMDSLCKDGLVNEAL 229
S+T +I+ +V A G ++ F +V V ++ ++ LC+ GL+++A+
Sbjct: 391 SHTFDIMISAYIEVDEVVCAHGLLEE----AFNMNVFVKSSRIEEVISRLCEKGLMDQAV 446
Query: 230 GLWSEMT 236
L + +
Sbjct: 447 ELLAHLV 453
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 131/310 (42%), Gaps = 37/310 (11%)
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
I+ + F ++ +I + S + M + G V+ ++N N ++
Sbjct: 99 IKEEPF-YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVP 157
Query: 160 GLAMRMDEMGYRCNSY-----THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
L DE+ R N ++G +I C G AI ++++G+G + +T
Sbjct: 158 QL---FDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTT 214
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTF 274
I+ SL K G + A LW+EM KG + D YN V
Sbjct: 215 ILSSLYKKGELEVADNLWNEMVKKGCELDNAAYN----------------------VRIM 252
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
SA ++ R + L+ M+ +G++P+ +YN L+ A+C + + +A KVY+ +
Sbjct: 253 SA------QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEG 306
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
C P+ T+ TLI C + ++ ++ + V PD T LV G +
Sbjct: 307 NNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDD 366
Query: 395 AKELISTMQK 404
AK LI T++K
Sbjct: 367 AKGLIRTVKK 376
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 115/268 (42%), Gaps = 22/268 (8%)
Query: 272 HTFSAIVDNYCKEGMIARAERLMGFM------------ARVGVEPNVFTYNSLINAHCLQ 319
H+ S + Y +E + R + F ++ EP Y++LI ++
Sbjct: 59 HSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEP---FYSTLIRSYGQA 115
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK--GLTPDIC 377
AM+ ++ M G S V++N L++ K DK L E+ + + PD
Sbjct: 116 SMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKI 175
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
++ L+ +C +G P A E++ MQ G I + IL L+K A +L+ E+
Sbjct: 176 SYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEM 235
Query: 438 EKM--NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREG 495
K LD IM S R+K+ E S + GLK D +Y ++ C G
Sbjct: 236 VKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSM---GLKPDTISYNYLMTAYCERG 292
Query: 496 LLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
+LD+A+++ +E C PN T+ +
Sbjct: 293 MLDEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 124/278 (44%), Gaps = 11/278 (3%)
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR-GKVLK-- 264
+ P Y+ ++ S + + N A+ + +M G V++N L H KV +
Sbjct: 101 EEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLF 160
Query: 265 -------KGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHC 317
I+PD ++ ++ +YC G +A +M M G+E + +++++
Sbjct: 161 DEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLY 220
Query: 318 LQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDIC 377
+ +++ A +++ M+ KGC YN I K + ++ L+ EM + GL PD
Sbjct: 221 KKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTI 279
Query: 378 TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL 437
++N L+ +C+ GM AK++ ++ + P+ T+ ++ L Y + +++++
Sbjct: 280 SYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKS 339
Query: 438 EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK 475
M+ ++ GL + DA+ ++ K
Sbjct: 340 VYMHKIPDFNTLKHLVVGLVENKKRDDAKGLIRTVKKK 377
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 125/295 (42%), Gaps = 17/295 (5%)
Query: 218 SLCKDGLVNEALGLWSEMTGKGIQPDVVTY--NCLTRGLFHCSRGKVLKKGIM-----PD 270
+L K+ ++AL +++ ++ P Y R L C R ++ I P
Sbjct: 39 TLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPK 98
Query: 271 VHT---FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAM- 326
+ +S ++ +Y + M A R M + G + ++N+L+NA CL + D +
Sbjct: 99 IKEEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNA-CLHSKNFDKVP 157
Query: 327 KVYDSMI--YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
+++D + Y +P ++Y LI +C +KA+ ++ +M KG+ + ++
Sbjct: 158 QLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILS 217
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAV-SLYRELEKMNLD 443
K G A L + M K G D Y + + K PE V L E+ M L
Sbjct: 218 SLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKES--PERVKELIEEMSSMGLK 275
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
Y+ ++ C G L +A++ + GL+ + T+ ++ LC L +
Sbjct: 276 PDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYE 330
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/245 (18%), Positives = 102/245 (41%), Gaps = 13/245 (5%)
Query: 325 AMKVYDSMIYKGCLPSTVTY--NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
A+K+Y ++ P + Y + K ++ +L+ N + ++ L
Sbjct: 49 ALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTL 108
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
+ + +A M A M ++G +++ +L+ + + L+ E+ +
Sbjct: 109 IRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQ--- 165
Query: 443 DRHITI------YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
R+ I Y I++ C G + A E +Q KG+++ +T ++ L ++G
Sbjct: 166 -RYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTEL 556
L+ A+ L +M +KGC ++ YN+ + + R ++ ++ M G D +
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESP-ERVKELIEEMSSMGLKPDTISYNY 283
Query: 557 LINFF 561
L+ +
Sbjct: 284 LMTAY 288
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 89/220 (40%), Gaps = 17/220 (7%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSL--GIEADSFTFTIVINCLCRLSRTDLGFCVLGL 129
F L+N + K++ L + I D ++ I+I C + ++
Sbjct: 140 FNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQ 199
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M G+E + TTI++ L +G +E A L M + G ++ + I K +
Sbjct: 200 MQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ES 258
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
+++ G K D Y +M + C+ G+++EA ++ + G P+ T+
Sbjct: 259 PERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRT 318
Query: 250 LTRGLFHCSRGKVLKKGI-----------MPDVHTFSAIV 278
L +FH ++ ++G +PD +T +V
Sbjct: 319 L---IFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLV 355
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 177/409 (43%), Gaps = 27/409 (6%)
Query: 123 GFCVLGL------MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG-YRCNSY 175
G+C +G +F E +++T T +++G G E GL +RM + G + NS
Sbjct: 217 GYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSN 276
Query: 176 THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM 235
T + V +FD+ + ++M K G + EA ++ M
Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVM 336
Query: 236 TGKGIQPDVVTYNCLTRGLFH----CSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
K D V++N L GL ++ +K D+ +++ ++ + +G I++
Sbjct: 337 KNK----DSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCV 392
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
L G M E + T+ ++I+A ++A+ + M+ K P++ T+++++
Sbjct: 393 ELFGMMP----EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSAT 448
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
+ + + + + G +V + D+ N+LV +CK G A ++ S + + P+
Sbjct: 449 ASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PNI 504
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
++Y ++ G F +A+ L+ LE + + + +L G + ++F
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS 564
Query: 472 LQAK-GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTY 519
+++ ++ Y MV L R GLLDDA L+ M C P+ +
Sbjct: 565 MKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMP---CKPHSGVW 610
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 173/420 (41%), Gaps = 43/420 (10%)
Query: 138 DIVTLTTIVNGLCAEGNVEQALGL--AMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG 195
D V +++G G +A+ + M + E+ C+S HG CK+G A
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV-VSCSSMVHG-----YCKMGRIVDARS 229
Query: 196 YFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV-VTYNCLTRGL 254
F ++ R +V +TA++D K G + GL+ M +G DV V N L
Sbjct: 230 LFDRMTER----NVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG---DVKVNSNTLAVMF 282
Query: 255 FHCS-----------RGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
C G V + + D+ ++++ Y K G + A+ + G M
Sbjct: 283 KACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMK----N 338
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
+ ++NSLI + Q+ +A ++++ M K V++ +I G+ ++ K + L
Sbjct: 339 KDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGFSGKGEISKCVEL 394
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
G M K D TW A++ F G A M + P+ T++ +L
Sbjct: 395 FGMMPEK----DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATAS 450
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
E + ++ + KMN+ +++ + ++ C G DA + FS + + ++ +
Sbjct: 451 LADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----EPNIVS 506
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
Y M+ G G A +L +E G PN T+ + + G + KY + MK
Sbjct: 507 YNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMK 566
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 188/429 (43%), Gaps = 39/429 (9%)
Query: 136 EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG 195
E + V+ T++ G G ++A L + +R +S +++G + G + A+
Sbjct: 141 EKNAVSYATMITGFVRAGRFDEAEFLYAET-PVKFR-DSVASNVLLSGYLRAGKWNEAVR 198
Query: 196 YFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF 255
F +G K +V ++++ CK G + +A L+ MT + +V+T+ + G F
Sbjct: 199 VF---QGMAVK-EVVSCSSMVHGYCKMGRIVDARSLFDRMT----ERNVITWTAMIDGYF 250
Query: 256 HCSR-----GKVLKKGIMPDVHTFS---AIVDNYCKEGMIAR-AERLMGFMARVGVEPNV 306
G L+ DV S A++ C++ + R ++ G ++R+ +E ++
Sbjct: 251 KAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDL 310
Query: 307 FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGE 366
F NSL++ + M +A V+ M K +V++N+LI G + K++ +A L +
Sbjct: 311 FLGNSLMSMYSKLGYMGEAKAVFGVMKNK----DSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 367 MVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP--DRITYAIILDGLFKC 424
M K D+ +W ++ GF G E+ ++ G +P D IT+ ++
Sbjct: 367 MPGK----DMVSWTDMIKGFSGKG------EISKCVELFGMMPEKDNITWTAMISAFVSN 416
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
+Y EA+ + ++ + + + +S +L S L + + + + D+
Sbjct: 417 GYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQ 476
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKG 544
+V C+ G +DA ++ + E PN +YN + G G ++ K +++
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCISE----PNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 545 KGFSADATT 553
G + T
Sbjct: 533 SGKEPNGVT 541
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 118/285 (41%), Gaps = 24/285 (8%)
Query: 40 LLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLG 99
L++ + K + A + F KM P ++ +T +I + + L M
Sbjct: 347 LITGLVQRKQISEAYELFEKM----PGKDMVSWTDMIKGFSGKGEISKCVELFGMMP--- 399
Query: 100 IEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQAL 159
E D+ T+T +I+ + C M + + P+ T +++++ + ++ + L
Sbjct: 400 -EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGL 458
Query: 160 GLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSL 219
+ R+ +M + ++++ CK GNT+ A F + + ++ Y ++
Sbjct: 459 QIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS----EPNIVSYNTMISGY 514
Query: 220 CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR----GKVLKK-----GIMPD 270
+G +AL L+S + G +P+ VT+ L H K K I P
Sbjct: 515 SYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPG 574
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
++ +VD + G++ A L+ M +P+ + SL++A
Sbjct: 575 PDHYACMVDLLGRSGLLDDASNLISTMP---CKPHSGVWGSLLSA 616
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 195/474 (41%), Gaps = 66/474 (13%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+T +++ V K + A+ + M S G++A+ FT + + L LG C G++
Sbjct: 131 WTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVI 190
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
G E + +T+ G + + DEM
Sbjct: 191 THGFEWNHFISSTLAY---LYGVNREPVDARRVFDEMP---------------------- 225
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEM-TGKGIQPDVVTYNCL 250
+ DV +TA++ + K+ L EALGL+ M GKG+ PD T+ +
Sbjct: 226 --------------EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTV 271
Query: 251 TRGLFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV 302
+ R GK++ GI +V S+++D Y K G + A ++ M++
Sbjct: 272 LTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSK--- 328
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
N ++++L+ +C + + A++++ M K + T++ + +
Sbjct: 329 -KNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKE 383
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
+ G+ V +G ++ +AL+ + K+G +A + S M + + IT+ +L L
Sbjct: 384 IHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKM----SIRNMITWNAMLSALA 439
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAK--GLKID 480
+ EAVS + ++ K + + +L G + + R +F L AK G+K
Sbjct: 440 QNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFV-LMAKSYGIKPG 498
Query: 481 VFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
Y+ M+ L R GL ++AE LL E C + + + + D SR
Sbjct: 499 TEHYSCMIDLLGRAGLFEEAENLL---ERAECRNDASLWGVLLGPCAANADASR 549
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 44/355 (12%)
Query: 42 SSMRDLKTVDAAVDFFNKMA--AINPFPNIKEFTVLINLVVKMKHYTTAISLVK-RMHSL 98
S +R ++ D A+ + ++ + +P + + + + K + ++ +L++ ++
Sbjct: 38 SKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNP 97
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
I+ ++F T+ I R S D + M K+G +V+ ++ E+
Sbjct: 98 KIKTETFLSTL-IRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERV 156
Query: 159 LGLAMRMDEMGYRCNSYT-----HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYT 213
L DE R N+ T +G +I C G A+ + +E +G + + +T
Sbjct: 157 PQL---FDEFPQRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFT 213
Query: 214 AIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHT 273
I+ SL K+GLV+EA LW EM KG D YN
Sbjct: 214 TILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVR----------------------- 250
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMI 333
+ N KE R + LM M+ VG++P+ +YN L+ A+C++ M +A KVY+ +
Sbjct: 251 ----LMNAAKES-PERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVYEGLE 305
Query: 334 YKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
P+ T+ TLI C D+ +++ + PD T L G K
Sbjct: 306 Q----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVK 356
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 118/264 (44%), Gaps = 15/264 (5%)
Query: 213 TAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKK------- 265
+ ++ S + + + A+ ++ EM G VV++N L H + + +
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQ 165
Query: 266 ---GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
I PD ++ ++ +YC G +A +M M GVE + + +++ + +
Sbjct: 166 RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLV 225
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
+A ++ M+ KGC YN + K + ++ L+ EM + GL PD ++N L
Sbjct: 226 DEAESLWIEMVNKGCDLDNTVYNVRLMNAAK-ESPERVKELMEEMSSVGLKPDTVSYNYL 284
Query: 383 VGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL 442
+ +C GM AK++ +++ P+ T+ ++ L Y + ++++++ ++
Sbjct: 285 MTAYCVKGMMSEAKKVYEGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHK 340
Query: 443 DRHITIYSIMLDGLCSYGRLKDAR 466
+ +GL R++DAR
Sbjct: 341 IPDFKTCKHLTEGLVKNNRMEDAR 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/279 (18%), Positives = 111/279 (39%), Gaps = 11/279 (3%)
Query: 293 LMGFMARVGVEPNVFTYNSLI---NAHCLQDQMQD---AMKVYDSMIYKGCLPSTVTY-- 344
L F G++ Y I A ++QD A+ +Y S+ P + Y
Sbjct: 11 LRRFSTATGIDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAM 70
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
+ K ++ +L+ N + L+ + +A M A ++ M K
Sbjct: 71 ELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDK 130
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM--NLDRHITIYSIMLDGLCSYGRL 462
G +++ +L + L+ E + N+ Y +++ C G+
Sbjct: 131 LGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKP 190
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLF 522
+ A E ++ KG+++ + +T ++ L + GL+D+AE L ++M KGC ++ YN+
Sbjct: 191 EKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNVR 250
Query: 523 VQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ + R ++ ++ M G D + L+ +
Sbjct: 251 LMNAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLMTAY 288
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/447 (20%), Positives = 174/447 (38%), Gaps = 82/447 (18%)
Query: 83 KHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVL--------------- 127
KH AI V+ + +D F ++ + + +LS D+ CV+
Sbjct: 120 KHVVAAIKTVRGLSQRRQGSDDMRF-VMSSFVAKLSFRDM--CVVLKEQRGWRQVRDFFS 176
Query: 128 GLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKV 187
+ ++ P +V T ++ G ++ A + M E+G ++ G ++ +
Sbjct: 177 WMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARW 236
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
G SA + ++K V+ R VY ++ SL K + + LW EM +G+ P+ TY
Sbjct: 237 GRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTY 296
Query: 248 NCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVF 307
+ +V +Y K+G A + G M +G P
Sbjct: 297 ---------------------------TLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEV 329
Query: 308 TYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEM 367
TY+S+I+ + A+ +Y+ M +G +PS T T++ + K + KA+SL +M
Sbjct: 330 TYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
Query: 368 VNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLP-DRITYAIILDGLFKCHF 426
+ ++P D + +I+ K
Sbjct: 390 ------------------------------------ERNKIPADEVIRGLIIRIYGKLGL 413
Query: 427 YPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI 486
+ +A S++ E E++NL Y M + G + A + ++ + + + F Y +
Sbjct: 414 FHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIV 473
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCP 513
M+Q + +D AE+ + + G P
Sbjct: 474 MLQCYAKIQNVDCAEEAFRALSKTGLP 500
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 171/413 (41%), Gaps = 36/413 (8%)
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
+L LMFK L V +++ EG+V +A +A + +G R T I L
Sbjct: 623 AILNLMFKTDLGSSAVN--RVISSFVREGDVSKAEMIADIIIRLGLRMEEET----IATL 676
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVP---VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
V + K++ + P V +++D+ + G + +A GL+ E KG
Sbjct: 677 IAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCD 736
Query: 242 PDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
P VT + L L +RGK H + + C E
Sbjct: 737 PGAVTISILVNAL--TNRGK----------HREAEHISRTCLEK---------------N 769
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
+E + YN+LI A ++Q A ++Y+ M G S TYNT+I + + ++DKA+
Sbjct: 770 IELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAI 829
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL 421
+ GL D + ++ + K G A L S MQK G P +Y +++
Sbjct: 830 EIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKIC 889
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
+ E L + +E+ ++ Y ++ + +A + + ++ KG+ +
Sbjct: 890 ATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSH 949
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
++ ++ L + G++++AE+ M E G P+ ++G + GD +
Sbjct: 950 SHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEK 1002
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 126/285 (44%), Gaps = 2/285 (0%)
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P +++D Y + G + A L A G +P T + L+NA + + ++A +
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+ + K TV YNTLI + K+ A + M G+ I T+N ++ + +
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
A E+ S ++ G D Y ++ K EA+SL+ E++K +
Sbjct: 822 GLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS 881
Query: 449 YSIMLDGLCSYGRL-KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
Y++M+ +C+ RL + E ++ G D+ TY ++Q +AE+ + +
Sbjct: 882 YNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLV 940
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
+EKG P + ++ + L++ G + +E+ M G S D+
Sbjct: 941 KEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSA 985
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 121/285 (42%), Gaps = 8/285 (2%)
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
G + + T +I++N L + + + +E D V T++ + G ++ A
Sbjct: 734 GCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCA 793
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
+ RM G C+ T+ +I+ + AI F G D +YT ++
Sbjct: 794 SEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMH 853
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYN-----CLTRGLFHCSR---GKVLKKGIMPD 270
K G ++EAL L+SEM KGI+P +YN C T L H + + G D
Sbjct: 854 YGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTD 913
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
+ T+ ++ Y + A AE+ + + G+ + ++SL++A M++A + Y
Sbjct: 914 LSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYC 973
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
M G P + T++ G+ +K + +M+ + D
Sbjct: 974 KMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDD 1018
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/277 (20%), Positives = 118/277 (42%)
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
P V ++ ++ Y + G I AE M VG EP+ +++ + + +
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
Y ++ + L ST YN ++ K K + L EMV +G+ P+ T+ +V + K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
G A + M+ G +P+ +TY+ ++ K + +A+ LY ++ +
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYT 365
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
+ ML A F+ ++ + D ++++ + GL DA+ + + E
Sbjct: 366 CATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETE 425
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
++ TY Q L G++ ++ +++MK +
Sbjct: 426 RLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTR 462
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/343 (21%), Positives = 147/343 (42%), Gaps = 23/343 (6%)
Query: 241 QPDVVTYNCLTRGLFHCSRGKV----------LKKGIMPDVHTFSAIVDNYCKEGMIARA 290
+P VV Y + R + GK+ L+ G PD ++ Y + G R
Sbjct: 185 RPSVVVYTIVLR--LYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWG---RH 239
Query: 291 ERLMGFMARVGVEPNVFT---YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
++ F V + + YN ++++ + + ++ M+ +G P+ TY +
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
+ + K ++A+ GEM + G P+ T+++++ KAG A L M+ G
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGI 359
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
+P T A +L +K YP+A+SL+ ++E+ + I +++ G DA+
Sbjct: 360 VPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQS 419
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLL 527
F + L D TY M Q G + A ++ M+ + P + Y + +Q
Sbjct: 420 MFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYA 479
Query: 528 RRGDISRSEKYLQLMKGKGFSADATTTELLINFFS----GNKA 566
+ ++ +E+ + + G DA++ ++N ++ G KA
Sbjct: 480 KIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKA 521
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 106/549 (19%), Positives = 202/549 (36%), Gaps = 79/549 (14%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A F + +N + K + + + + + A+ +++ M + I F + +++
Sbjct: 417 AQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQ 476
Query: 113 CLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
C ++ D + K GL PD + C
Sbjct: 477 CYAKIQNVDCAEEAFRALSKTGL-PDASS------------------------------C 505
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
N ++N ++ A G+ K++ FD+ +Y M CK+G+V EA L
Sbjct: 506 ND-----MLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLI 560
Query: 233 SEMTGKGIQPDVVTYNCLTRGLF----HCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
+M + D L + H VL + DV +++ KEG +
Sbjct: 561 VKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQL-DVMALGLMLNLRLKEGNLN 619
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
+ ++ M + + + N +I++ + + A + D +I G T TLI
Sbjct: 620 ETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLI 677
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
+ + K+ +A L + TP +++ + + G A L + G
Sbjct: 678 AVYGRQHKLKEAKRLYL-AAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCD 736
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGL------------ 456
P +T +I+++ L + EA + R + N++ Y+ ++ +
Sbjct: 737 PGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEI 796
Query: 457 ----------CS----------YGR---LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR 493
CS YGR L A E FS + GL +D YT M+ +
Sbjct: 797 YERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGK 856
Query: 494 EGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
G + +A L +M++KG P +YN+ V+ ++ LQ M+ G D +T
Sbjct: 857 GGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLST 916
Query: 554 TELLINFFS 562
LI ++
Sbjct: 917 YLTLIQVYA 925
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 88/436 (20%), Positives = 177/436 (40%), Gaps = 43/436 (9%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+ +++ + K + I L M G+ + FT+T+V++ + + G M
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMK 320
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
+G P+ VT +++++ G+ E+A+GL M G ++YT +++ K N
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A+ F +E D + I+ K GL ++A ++ E + D TY ++
Sbjct: 381 KALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMS 440
Query: 252 RGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNS 311
+ H + G V+K I E M R L F V ++ Y
Sbjct: 441 Q--VHLNSGNVVK--------ALDVI------EMMKTRDIPLSRFAYIVMLQ----CYAK 480
Query: 312 LINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKG 371
+ N C ++ + + K LP + N +++ + ++ +KA + +++
Sbjct: 481 IQNVDCAEEAFR--------ALSKTGLPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQ 532
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL--FKCHFYPE 429
+ DI + + +CK GM A++LI M + ++ D + + + H E
Sbjct: 533 VHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHE 592
Query: 430 AVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTI--M 487
AV +L+ M L +ML+ G L + + + + K D+ + + +
Sbjct: 593 AVLNVSQLDVMAL-------GLMLNLRLKEGNLNETKAILNLM----FKTDLGSSAVNRV 641
Query: 488 VQGLCREGLLDDAEQL 503
+ REG + AE +
Sbjct: 642 ISSFVREGDVSKAEMI 657
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 139/340 (40%), Gaps = 16/340 (4%)
Query: 137 PDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY 196
P + ++++ G +E A GL M E G + T ++N L G A
Sbjct: 702 PGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHI 761
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT----R 252
+ + + D Y ++ ++ + G + A ++ M G+ + TYN + R
Sbjct: 762 SRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGR 821
Query: 253 GL--------FHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEP 304
GL F +R + G+ D ++ ++ +Y K G ++ A L M + G++P
Sbjct: 822 GLQLDKAIEIFSNAR----RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKP 877
Query: 305 NVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLL 364
+YN ++ + ++ +M G TY TLI + + + +A +
Sbjct: 878 GTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTI 937
Query: 365 GEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKC 424
+ KG+ +++L+ KAGM A+ M + G PD IL G C
Sbjct: 938 TLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTC 997
Query: 425 HFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD 464
+ + Y ++ + +++ + S++ D + G+ +D
Sbjct: 998 GDAEKGILFYEKMIRSSVEDDRFVSSVVEDLYKAVGKEQD 1037
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 108/527 (20%), Positives = 201/527 (38%), Gaps = 33/527 (6%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
+ A+ F +M ++ P ++ +I+L VK + AI L + M S GI ++T +
Sbjct: 310 EEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATM 369
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN-----GLC--AEGNVEQALGLAM 163
++ + + M + + D V I+ GL A+ E+ L +
Sbjct: 370 LSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNL 429
Query: 164 RMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDG 223
DE Y S H +N GN A+ + ++ R Y ++ K
Sbjct: 430 LADEKTYLAMSQVH---LNS----GNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQ 482
Query: 224 LVNEALGLWSEMTGKGIQPDVVT----YNCLTR-GLFHCSRG---KVLKKGIMPDVHTFS 275
V+ A + ++ G+ PD + N TR L ++G +++ + D+ +
Sbjct: 483 NVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYK 541
Query: 276 AIVDNYCKEGMIARAERLMGFMARVG-VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+ YCKEGM+A A+ L+ M R V+ N F + H + + + S +
Sbjct: 542 TAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQL- 600
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
+ +++ K +++ ++L M L N ++ F + G
Sbjct: 601 -----DVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSK 653
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A+ + + + G + T A ++ + H EA LY + I S M+D
Sbjct: 654 AEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSVIRS-MID 712
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
G L+DA F KG T +I+V L G +AE + EK
Sbjct: 713 AYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIEL 772
Query: 515 NDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
+ YN ++ +L G + + + + M G T +I+ +
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVY 819
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 193/451 (42%), Gaps = 66/451 (14%)
Query: 94 RMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEG 153
R+H L E + T + + L RL + + M +GL+P+ + ++ L G
Sbjct: 98 RIHFLE-ERNEETLSKRLRKLSRLDKVRSALELFDSMRFLGLQPNAHACNSFLSCLLRNG 156
Query: 154 NVEQALGLA--MRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVE---GRGFKFD 208
++++A + MR E +T+ ++ + +V +A+ F+++E R FD
Sbjct: 157 DIQKAFTVFEFMRKKE---NVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFD 213
Query: 209 VPVY-TAIMDSLCKDGLVN---EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV-- 262
V +Y TAI SLC G +N E +W M G G +TY+ L C R ++
Sbjct: 214 VVLYNTAI--SLC--GRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELAL 269
Query: 263 -----------------------------------------LKKGIMPDVHTFSAIVDNY 281
LKKG+ P++ + ++++
Sbjct: 270 DVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSL 329
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKG-CLPS 340
K G + ++ + +G +P+ +T+N+L+ A ++ +D ++++D + + C +
Sbjct: 330 GKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLN 389
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIS 400
YNT + K+ +KA+ LL EM GLT ++N ++ K+ A +
Sbjct: 390 EYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYE 449
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M + P+ TY ++ + E + +++E +++Y+ + G+C
Sbjct: 450 HMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEP-----DVSLYNAAIHGMCLRR 504
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGL 491
K A+E + ++ GL+ D T +M+Q L
Sbjct: 505 EFKFAKELYVKMREMGLEPDGKTRAMMLQNL 535
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 122/305 (40%), Gaps = 33/305 (10%)
Query: 72 FTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
+++L+++ V+ A+ + M + I +I+ + + DL + M
Sbjct: 252 YSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSML 311
Query: 132 KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
K G++P++V T++N L G V + + +G++ + YT A++ L K
Sbjct: 312 KKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYE 371
Query: 192 AAIGYFKKVEGRGF-KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL 250
+ F + + +Y M S K G +A+ L EM G G+ +YN +
Sbjct: 372 DVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLV 431
Query: 251 TRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
C + + K ++ H MA+ +PN FTY
Sbjct: 432 ISA---CEKSRKSKVALLVYEH------------------------MAQRDCKPNTFTYL 464
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
SL+ + C+ + D +V D I K P YN IHG C ++ A L +M
Sbjct: 465 SLVRS-CIWGSLWD--EVED--ILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREM 519
Query: 371 GLTPD 375
GL PD
Sbjct: 520 GLEPD 524
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 149/355 (41%), Gaps = 50/355 (14%)
Query: 85 YTTAISLVKRMHSL-------------GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMF 131
Y TAISL R++++ G T++++++ R R++L V M
Sbjct: 217 YNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMV 276
Query: 132 --KMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
K+ L D + +++ E + AL + M + G + N +IN L K G
Sbjct: 277 NNKISLRED--AMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGK 334
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
+ ++ G K D + A++ +L K + L L+ + + + C
Sbjct: 335 VGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENL-------CC 387
Query: 250 LTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKE-GMIARAERLMGFMARVGVEPNVFT 308
L L++ +A+V C++ G +A +L+ M G+ + +
Sbjct: 388 LNEYLYN------------------TAMVS--CQKLGYWEKAVKLLYEMEGSGLTVSTSS 427
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
YN +I+A + + A+ VY+ M + C P+T TY +L+ D+ +L
Sbjct: 428 YNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDIL---- 483
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
K + PD+ +NA + G C AKEL M++ G PD T A++L L K
Sbjct: 484 -KKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 104/234 (44%), Gaps = 8/234 (3%)
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY-KGCLPSTVTYNTL 347
R R+M +G E TY+ L++ + + A+ VYD M+ K L Y +
Sbjct: 235 RIWRVMKGDGHIGTE---ITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMY-AM 290
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
I K +K D A+ + M+ KG+ P++ N L+ KAG ++ S ++ G
Sbjct: 291 ISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGH 350
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL-DRHITIYSIMLDGLCSYGRLKDAR 466
PD T+ +L L+K + Y + + L+ + NL + +Y+ + G + A
Sbjct: 351 KPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAV 410
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD-MEEKGCPPNDCTY 519
+ ++ GL + +Y +++ C + L+ + M ++ C PN TY
Sbjct: 411 KLLYEMEGSGLTVSTSSYNLVISA-CEKSRKSKVALLVYEHMAQRDCKPNTFTY 463
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/302 (20%), Positives = 131/302 (43%), Gaps = 13/302 (4%)
Query: 266 GIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNV--FTYNSLINAHCLQDQMQ 323
G+ P+ H ++ + + G I +A + FM + + NV TY+ ++ A +
Sbjct: 137 GLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRK---KENVTGHTYSLMLKAVAEVKGCE 193
Query: 324 DAMKVYDSM----IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
A++++ + + C V YNT I +I + + + M G T+
Sbjct: 194 SALRMFRELEREPKRRSCF-DVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITY 252
Query: 380 NALVGGFCKAGMPLAAKELISTMQKHG-QLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
+ LV F + G A ++ M + L + YA+I K + A+ +++ +
Sbjct: 253 SLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMI-SACTKEEKWDLALKIFQSML 311
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
K + ++ + +++ L G++ + +S L++ G K D +T+ ++ L + +
Sbjct: 312 KKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYE 371
Query: 499 DAEQLL-MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
D QL M E C N+ YN + + G ++ K L M+G G + ++ L+
Sbjct: 372 DVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLV 431
Query: 558 IN 559
I+
Sbjct: 432 IS 433
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 164/377 (43%), Gaps = 48/377 (12%)
Query: 189 NTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYN 248
+ A+ Y K+ K DV + ++ + + + L++EM +G+ PD T+
Sbjct: 57 SVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFT 116
Query: 249 CLTRGLFHCSR-----------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
+ + CS+ GKV++ G + + + +A++ + G + A L
Sbjct: 117 FVLKA---CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDS 173
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
A+ + ++S+ + + + ++ +AM+++D M YK V +N +I G K K+M
Sbjct: 174 AKA----HKVAWSSMTSGYAKRGKIDEAMRLFDEMPYK----DQVAWNVMITGCLKCKEM 225
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
D A L K D+ TWNA++ G+ G P A + M+ G+ PD +T I
Sbjct: 226 DSARELFDRFTEK----DVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVT---I 278
Query: 418 LDGLFKCHFYPEAVSLYRE----LEKMNLDRHI----TIYSIMLDGLCSYGRLKDAREFF 469
L L C + + R LE ++ I I++ ++D G + A E F
Sbjct: 279 LSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVF 338
Query: 470 SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE---QLLMDMEEKGCPPNDCTYNLFVQGL 526
G++ + D+ T+ ++ GL L AE ++ +M+ PN+ T+ +
Sbjct: 339 RGVKDR----DLSTWNTLIVGLA----LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILAC 390
Query: 527 LRRGDISRSEKYLQLMK 543
G + KY LM+
Sbjct: 391 SHSGRVDEGRKYFSLMR 407
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/435 (19%), Positives = 168/435 (38%), Gaps = 58/435 (13%)
Query: 49 TVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFT 108
+V A+ + +K+ P P++ ++ + +SL M G+ D +TFT
Sbjct: 57 SVPGALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFT 116
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
V+ +L GF G + + G
Sbjct: 117 FVLKACSKLEWRSNGFAFHGKVVRHG---------------------------------- 142
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
+ N Y A+I G+ A F K ++++ K G ++EA
Sbjct: 143 -FVLNEYVKNALILFHANCGDLGIASELFDD----SAKAHKVAWSSMTSGYAKRGKIDEA 197
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHC----SRGKVLKKGIMPDVHTFSAIVDNYCKE 284
+ L+ EM K D V +N + G C S ++ + DV T++A++ Y
Sbjct: 198 MRLFDEMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNC 253
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV-- 342
G A + M G P+V T SL++A + ++ +++ ++ + S++
Sbjct: 254 GYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYV 313
Query: 343 ---TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
+N LI + K +D+A+ + + ++ D+ TWN L+ G + E+
Sbjct: 314 GTPIWNALIDMYAKCGSIDRAIEVFRGVKDR----DLSTWNTLIVGLALHHAE-GSIEMF 368
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM-NLDRHITIYSIMLDGLCS 458
MQ+ P+ +T+ ++ E + + M N++ +I Y M+D L
Sbjct: 369 EEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGR 428
Query: 459 YGRLKDAREFFSGLQ 473
G+L++A F ++
Sbjct: 429 AGQLEEAFMFVESMK 443
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/499 (20%), Positives = 194/499 (38%), Gaps = 29/499 (5%)
Query: 65 PFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGF 124
P N ++ +I V+ + A+ K M + + V+ LS LG
Sbjct: 242 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 301
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
+ K D + T ++ N++ A L + + N ++ A+I G
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL----NRQSYNAMITGY 357
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
+ + A+ F ++ G FD + + + ++E L ++ + DV
Sbjct: 358 SQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDV 417
Query: 245 VTYNCLTRGLFHCSR----GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARV 300
N C +V + D +++AI+ + + G L M R
Sbjct: 418 CVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRS 477
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKA 360
+EP+ FT+ S++ A C + M+++ S++ G ++ +LI + K +++A
Sbjct: 478 RIEPDEFTFGSILKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEA 536
Query: 361 ----------------MSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
M L +M NK L +WN+++ G+ A+ L + M +
Sbjct: 537 EKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMME 596
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD 464
G PD+ TYA +LD ++ ++ K L + I S ++D G L D
Sbjct: 597 MGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHD 656
Query: 465 AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
+R F K L+ D T+ M+ G G ++A QL M + PN T+ ++
Sbjct: 657 SRLMFE----KSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILR 712
Query: 525 GLLRRGDISRSEKYLQLMK 543
G I + +Y +MK
Sbjct: 713 ACAHMGLIDKGLEYFYMMK 731
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 118/564 (20%), Positives = 212/564 (37%), Gaps = 112/564 (19%)
Query: 68 NIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVL 127
N + + +I + +H A+ L R+ S G+ D + + V + G +
Sbjct: 346 NRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 128 GLMFKMGLEPDIVTLTTIVN--GLCAEGNVEQALGLAMRM-DEMGYRCNSYTHGAIINGL 184
GL K L D+ ++ G C QAL A R+ DEM R
Sbjct: 406 GLAIKSSLSLDVCVANAAIDMYGKC------QALAEAFRVFDEMRRR------------- 446
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
D + AI+ + ++G E L L+ M I+PD
Sbjct: 447 -----------------------DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDE 483
Query: 245 VTYNCLTRGLFHCSRG-------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG-F 296
T+ + + S G ++K G+ + +++D Y K GMI AE++ F
Sbjct: 484 FTFGSILKACTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRF 543
Query: 297 MARVGVEPNV---------------FTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
R V + ++NS+I+ + +++Q +DA ++ M+ G P
Sbjct: 544 FQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDK 603
Query: 342 VTYNTL---------------IHGWCKIKKMDKAMSLLGEMVN----------------K 370
TY T+ IH K++ + + +V+ K
Sbjct: 604 FTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEK 663
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
L D TWNA++ G+ G A +L M P+ +T+ IL +
Sbjct: 664 SLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKG 723
Query: 431 VSLYRELEK-MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQ 489
+ + +++ LD + YS M+D L G++K A E + + DV T++
Sbjct: 724 LEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEA--DDVIWRTLL-- 779
Query: 490 GLC-----REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ-GLLRR-GDISRSEKYLQLM 542
G+C + ++A L+ ++ + N++ G+ + D+ R+ + +L
Sbjct: 780 GVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLK 839
Query: 543 KGKGFSADATTTELLINFFSGNKA 566
K G S EL + F G+KA
Sbjct: 840 KEPGCSWVELKDELHV-FLVGDKA 862
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 105/250 (42%), Gaps = 18/250 (7%)
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
FS + K+G + ++ M G P F N L+ + A V+D M
Sbjct: 50 NFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKM 109
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
L V++N +I+G+ K M KA S M + D+ +WN+++ G+ + G
Sbjct: 110 ----PLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVR----DVVSWNSMLSGYLQNGES 161
Query: 393 LAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPE---AVSLYRELEKMNLDRHITIY 449
L + E+ M + G D T+AIIL C F + + ++ + ++ D +
Sbjct: 162 LKSIEVFVDMGREGIEFDGRTFAIILK---VCSFLEDTSLGMQIHGIVVRVGCDTDVVAA 218
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE 509
S +LD R ++ F G+ K + +++ ++ G + LL A + +M++
Sbjct: 219 SALLDMYAKGKRFVESLRVFQGIPEK----NSVSWSAIIAGCVQNNLLSLALKFFKEMQK 274
Query: 510 KGCPPNDCTY 519
+ Y
Sbjct: 275 VNAGVSQSIY 284
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 154/354 (43%), Gaps = 16/354 (4%)
Query: 35 PKRRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKR 94
P R L + L+ FFN + + + FP T+ N+ +K + L++
Sbjct: 151 PNRDNALLVLNSLREWQKTHTFFNWVKSKSLFPME---TIFYNVTMKSLRFGRQFQLIEE 207
Query: 95 MH----SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLC 150
M G+E D+ T++ +I C R + + M+K GL PD VT + I++
Sbjct: 208 MALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYS 267
Query: 151 AEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP 210
G VE+ L L R G++ ++ + + G+ ++++ K +V
Sbjct: 268 KSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVV 327
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR--GLFHCSRGKV-----L 263
VY +++++ + G A L++EM G+ P+ T L + G +R + +
Sbjct: 328 VYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEM 387
Query: 264 KKGIMPDVHTFSAIVDNYCKE-GMIARAERLMGFMAR-VGVEPNVFTYNSLINAHCLQDQ 321
K P + N C + G+ AERL M V P+ F+Y +++N + +
Sbjct: 388 KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGK 447
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
+ AM++++ M+ G + + L+ K K++D + + + +G+ PD
Sbjct: 448 AEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 163/392 (41%), Gaps = 18/392 (4%)
Query: 137 PDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGY 196
P I L L + E++ L++ +DE+ + N ++N L + T +
Sbjct: 117 PQIKDLRAFALKLNSSIFTEKSEFLSL-LDEIPHPPNRDNALLVLNSLREWQKTHT---F 172
Query: 197 FKKVEGRG-FKFDVPVYTAIMDSL--CKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG 253
F V+ + F + Y M SL + + E + L EM G++ D +TY+ +
Sbjct: 173 FNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMAL--EMVKDGVELDNITYSTIITC 230
Query: 254 LFHCSR--------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
C+ ++ K G+MPD T+SAI+D Y K G + L G +P+
Sbjct: 231 AKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPD 290
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLG 365
++ L V M P+ V YNTL+ + K A SL
Sbjct: 291 AIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFN 350
Query: 366 EMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCH 425
EM+ GLTP+ T ALV + KA A +L M+ D I Y +L+
Sbjct: 351 EMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIG 410
Query: 426 FYPEAVSLYREL-EKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTY 484
EA L+ ++ E + Y+ ML+ S G+ + A E F + G++++V
Sbjct: 411 LEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGC 470
Query: 485 TIMVQGLCREGLLDDAEQLLMDMEEKGCPPND 516
T +VQ L + +DD + ++G P+D
Sbjct: 471 TCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDD 502
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 100/215 (46%), Gaps = 6/215 (2%)
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
YN + + Q Q ++ M+ G +TY+T+I + +KA+ M
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMY 248
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKH---GQLPDRITYAIILDGLFKCH 425
GL PD T++A++ + K+G +E++S ++ G PD I ++++ +
Sbjct: 249 KTGLMPDEVTYSAILDVYSKSG---KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 426 FYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYT 485
Y + +E++ M++ ++ +Y+ +L+ + G+ AR F+ + GL + T T
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLT 365
Query: 486 IMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
+V+ + DA QL +M+ K P + YN
Sbjct: 366 ALVKIYGKARWARDALQLWEEMKAKKWPMDFILYN 400
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 126/291 (43%), Gaps = 17/291 (5%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
+ A+++F +M P+ ++ ++++ K +SL +R + G + D+ F+++
Sbjct: 238 NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL 297
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
D VL M M ++P++V T++ + G A L M E G
Sbjct: 298 GKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGL 357
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKD-GLVNEAL 229
N T A++ K A+ +++++ + + D +Y +++ +C D GL EA
Sbjct: 358 TPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN-MCADIGLEEEAE 416
Query: 230 GLWSEMTGKGIQ--PDVVTYNCLTRGLFHCSRGK----------VLKKGIMPDVHTFSAI 277
L+++M + +Q PD +Y + + S GK +LK G+ +V + +
Sbjct: 417 RLFNDMK-ESVQCRPDNFSYTAMLN--IYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCL 473
Query: 278 VDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
V K I + + GV+P+ L++ L + +DA KV
Sbjct: 474 VQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKV 524
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 69/166 (41%)
Query: 396 KELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDG 455
+E+ M K G D ITY+ I+ +C+ Y +A+ + + K L YS +LD
Sbjct: 206 EEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV 265
Query: 456 LCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPN 515
G++++ + A G K D ++++ + G D +L +M+ PN
Sbjct: 266 YSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPN 325
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFF 561
YN ++ + R G + M G + + T L+ +
Sbjct: 326 VVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIY 371
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 198/488 (40%), Gaps = 41/488 (8%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGI---EADSFTFTIVINCLCRLSRTDLG 123
PNI + V I + ++ + L K+M G D FT+ ++ L + LG
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 124 FCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIING 183
+LG + K+ LE ++ + G++E A + DE R + + +ING
Sbjct: 176 HMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKV---FDESPVR-DLVSWNCLING 231
Query: 184 LCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
K+G AI +K +E G K D ++ S G +N + + G++
Sbjct: 232 YKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMT 291
Query: 244 VVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGV- 302
+ N L C D+H I DN K +++ + G+ AR G+
Sbjct: 292 IPLVNALMDMFSKCG-----------DIHEARRIFDNLEKRTIVSWTTMISGY-ARCGLL 339
Query: 303 -----------EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
E +V +N++I + QDA+ ++ M P +T +
Sbjct: 340 DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG-QLPD 410
++ +D + + + L+ ++ +LV + K G E +S HG Q +
Sbjct: 400 SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCG---NISEALSVF--HGIQTRN 454
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
+TY I+ GL A+S + E+ + + +L C G ++ R++FS
Sbjct: 455 SLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFS 514
Query: 471 GLQAK-GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRR 529
++++ L + Y+IMV L R GLL++A++L ME + + + G
Sbjct: 515 QMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL---MESMPMEADAAVWGALLFGCRMH 571
Query: 530 GDISRSEK 537
G++ EK
Sbjct: 572 GNVELGEK 579
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 15/242 (6%)
Query: 327 KVYDSMIYKGCLPSTVTYNTLIHGWCKIKK---MDKAMSLLGEMVNKGLTPDICTWNALV 383
++ MI G + + LI +C + + +D ++ +L + N P+I +WN +
Sbjct: 71 QIQAQMIINGLILDPFASSRLI-AFCALSESRYLDYSVKILKGIEN----PNIFSWNVTI 125
Query: 384 GGFCKAGMPLAAKELISTMQKHG---QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
GF ++ P + L M +HG PD TY ++ + + K+
Sbjct: 126 RGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKL 185
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDA 500
L+ +++ + S G +++AR+ F + D+ ++ ++ G + G + A
Sbjct: 186 RLELVSHVHNASIHMFASCGDMENARKVFDESPVR----DLVSWNCLINGYKKIGEAEKA 241
Query: 501 EQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINF 560
+ ME +G P+D T V GD++R +++ + +K G L++
Sbjct: 242 IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM 301
Query: 561 FS 562
FS
Sbjct: 302 FS 303
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 96/452 (21%), Positives = 194/452 (42%), Gaps = 24/452 (5%)
Query: 67 PNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCV 126
P + + +I ++ A++ M + G D F V+ + G V
Sbjct: 68 PPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 127 LGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
G + ++G++ D+ T ++N + + + DEM R ++ + C
Sbjct: 128 HGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCI 187
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVT 246
+ I ++V + DV Y I+ + G+ +AL + EM ++PD T
Sbjct: 188 M---PFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 247 YNCLT---RGLFHCSRGK-----VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM- 297
+ + +GK V++KGI DV+ S++VD Y K I +ER+ +
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM 357
R G+ ++NSL+ + + +A++++ M+ P V ++++I + +
Sbjct: 305 CRDGI-----SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATL 359
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITY-AI 416
L G ++ G +I +ALV + K G AA+++ M + D +++ AI
Sbjct: 360 HLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM----NVLDEVSWTAI 415
Query: 417 ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGL-QAK 475
I+ H + EAVSL+ E+++ + + + +L G + +A +F+ + +
Sbjct: 416 IMGHALHGHGH-EAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVY 474
Query: 476 GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
GL ++ Y + L R G L++A + M
Sbjct: 475 GLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 124/280 (44%), Gaps = 21/280 (7%)
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
+++A++ Y + G + A +L M V +V YN++++ M A +++D M
Sbjct: 146 SWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGFVKSGDMTSARRLFDEM 202
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
+K + +T+ T+IHG+C IK +D A L M + L +WN ++GG+C+ P
Sbjct: 203 THK----TVITWTTMIHGYCNIKDIDAARKLFDAMPERNLV----SWNTMIGGYCQNKQP 254
Query: 393 LAAKELISTMQKHGQL-PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
L MQ L PD +T +L + + +++ LD+ + + +
Sbjct: 255 QEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTA 314
Query: 452 MLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM--EE 509
+LD G ++ A+ F + K V ++ M+ G G A L + M EE
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEK----QVASWNAMIHGYALNGNARAALDLFVTMMIEE 370
Query: 510 KGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSA 549
K P++ T + G + K+ +M+ G +A
Sbjct: 371 K---PDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNA 407
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 172/438 (39%), Gaps = 90/438 (20%)
Query: 75 LINLVVKMKHYTTAISLVKRMHSLGIEA-DSFTFTIVINCLCRLSR-TDLGFCVLGLMFK 132
+I ++ + Y + +L + + A D+FTFT + C LS G + +++
Sbjct: 48 MIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKS-CSLSMCVYQGLQLHSQIWR 106
Query: 133 MGLEPDIVTLTTIVNGLCAEGNVEQALGLAMR-MDEMGYRCN-SYTHGAIINGLCKVGNT 190
G D+ T +V+ G +G A DEM +R S+T A+I+G + G
Sbjct: 107 FGFCADMYVSTGVVDMYAKFGK----MGCARNAFDEMPHRSEVSWT--ALISGYIRCGEL 160
Query: 191 SAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL 250
A F ++ DV +Y A+MD K G + A L+ EMT K
Sbjct: 161 DLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRLFDEMTHKT----------- 206
Query: 251 TRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
V T++ ++ YC I A +L M E N+ ++N
Sbjct: 207 --------------------VITWTTMIHGYCNIKDIDAARKLFDAMP----ERNLVSWN 242
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCL-PSTVTYNTLIHG-----------WC------ 352
++I +C Q Q+ ++++ M L P VT +++ WC
Sbjct: 243 TMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQR 302
Query: 353 -----KIK-------------KMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
K+K +++KA + EM K + +WNA++ G+ G A
Sbjct: 303 KKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEK----QVASWNAMIHGYALNGNARA 358
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLD 454
A +L TM + PD IT ++ E + + +M L+ I Y M+D
Sbjct: 359 ALDLFVTMMIE-EKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVD 417
Query: 455 GLCSYGRLKDAREFFSGL 472
L G LK+A + + +
Sbjct: 418 LLGRAGSLKEAEDLITNM 435
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 151/383 (39%), Gaps = 49/383 (12%)
Query: 175 YTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSE 234
+ + +++ L K N ++ RG + A + CK G V+EAL L+
Sbjct: 358 FRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRS 417
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSRGKVLK-----KGIMPDVH-----TFSAIVDNYCKE 284
+ G P ++YN L L C+ V + KG + H TFS + + C +
Sbjct: 418 RSEIGFAPTAMSYNYLIHTL--CANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWK 475
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G A L+ A + P +I+A C +++DA+ + + G S +
Sbjct: 476 GKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMF 535
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTP------------------------------ 374
+LI+G + + D A L+ M KG TP
Sbjct: 536 TSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQ 595
Query: 375 ------DICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
+ +N + G AG P A+ + M + G P + ++L K
Sbjct: 596 LSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIA 655
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV 488
+A+ + +L + + +Y +M+ GLC +L DA F ++ +GL+ + Y + +
Sbjct: 656 DALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNI 714
Query: 489 QGLCREGLLDDAEQLLMDMEEKG 511
Q LC E D+A L+ + + G
Sbjct: 715 QKLCNEEKYDEAVGLVNEFRKSG 737
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/515 (20%), Positives = 200/515 (38%), Gaps = 57/515 (11%)
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN 154
M G++ DSF + +++N L D F V+ + VT + +V C +G
Sbjct: 208 MRFRGLDLDSFGYHVLLNALVEEKCFD-SFDVIFDQISVRGFVCAVTHSILVKKFCKQGK 266
Query: 155 VEQA---LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV 211
+++A L + D G C S G +++ LC A +++ G
Sbjct: 267 LDEAEDYLRALLPNDPAG--CGSGL-GILVDALCSKRKFQEATKLLDEIKLVGTVNMDRA 323
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTG-KGIQPDVVTYNCLTRGLFHCSR--------GKV 262
Y + +L K G +N +++ +G + +V YN + L + ++
Sbjct: 324 YNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEM 383
Query: 263 LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQM 322
+ +G+ P+ T +A + +CK G + A L + +G P +YN LI+ C + +
Sbjct: 384 MVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESV 443
Query: 323 QDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNAL 382
+ A V I +G T++TL + C K D A L+ + L P +
Sbjct: 444 EQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKI 503
Query: 383 VGGFC----------------KAGMPLA-------------------AKELISTMQKHGQ 407
+ C K+G+ + A +LI MQ+ G
Sbjct: 504 ISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGY 563
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL---DRHITIYSIMLDGLCSYGRLKD 464
P R Y ++ + C + + L K L + + Y++ ++G G+ K
Sbjct: 564 TPTRSLYRNVIQCV--CEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKL 621
Query: 465 AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
AR + + G+ V + +M+Q + + DA D+ E+G Y + +
Sbjct: 622 ARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQG-KTKKRLYQVMIV 680
Query: 525 GLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
GL + + + +L+ MKG+G E+ I
Sbjct: 681 GLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQ 715
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 184/484 (38%), Gaps = 23/484 (4%)
Query: 49 TVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFT 108
+D D +M PN K + K A+ L + +G + ++
Sbjct: 372 NLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYN 431
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
+I+ LC + + VL G T +T+ N LC +G + A L + E
Sbjct: 432 YLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAER 491
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
II+ LC VG A+ + G ++T+++ + A
Sbjct: 492 DLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIA 551
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK------VLKKGIM---PDVHTFSAIVD 279
L M KG P Y + + + G+ +LK + V ++ ++
Sbjct: 552 AKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIE 611
Query: 280 NYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLP 339
G A + M R G+ P V + ++ ++ +++ DA+ + + +G
Sbjct: 612 GAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTK 671
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
+ Y +I G CK K+D AM L EM +GL P I + + C A L+
Sbjct: 672 KRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLV 730
Query: 400 STMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK-----MNLDRHITIYSIMLD 454
+ +K G+ ++L K EA + R +E +L I ++S +D
Sbjct: 731 NEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKSLGELIGLFSGRID 790
Query: 455 GLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPP 514
RL + E K +D++TY ++++ + +DA +++ + +G P
Sbjct: 791 MEVELKRLDEVIE-------KCYPLDMYTYNMLLRMIVMNQ-AEDAYEMVERIARRGYVP 842
Query: 515 NDCT 518
N+ T
Sbjct: 843 NERT 846
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 169/393 (43%), Gaps = 38/393 (9%)
Query: 179 AIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGK 238
A++ G G T A+ +F + RG D Y ++++L ++ + ++ +++ +
Sbjct: 187 ALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVR 246
Query: 239 GIQPDVVTYNCLTRGLFHCSRGKVLK-----KGIMPDVHT-----FSAIVDNYCKEGMIA 288
G VT++ L + C +GK+ + + ++P+ +VD C +
Sbjct: 247 GFVC-AVTHSILVKKF--CKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQ 303
Query: 289 RAERLMGFMARVGVEPNVFTYN----SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
A +L+ + VG YN +LI A L + K+ +GC Y
Sbjct: 304 EATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISP---LEGCELEVFRY 360
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
N+++ K +D +L EM+ +G++P+ T NA + FCKAG A EL + +
Sbjct: 361 NSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSE 420
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR-HI---TIYSIMLDGLCSYG 460
G P ++Y ++ L C E+V ++ K +DR H +S + + LC G
Sbjct: 421 IGFAPTAMSYNYLIHTL--CA--NESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKG 476
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
+ ARE + L ++ LC G ++DA LM E D ++
Sbjct: 477 KPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDA---LMINELFNKSGVDTSFK 533
Query: 521 LFVQGL-----LRRGDISRSEKYLQLMKGKGFS 548
+F + L RGDI + K + M+ KG++
Sbjct: 534 MFTSLIYGSITLMRGDI--AAKLIIRMQEKGYT 564
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 108/274 (39%), Gaps = 41/274 (14%)
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD--------------- 375
S+ ++ C S + L+ G+ + D A+ G M +GL D
Sbjct: 172 SVGFESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEK 231
Query: 376 -----------------IC--TWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAI 416
+C T + LV FCK G A++ + + + I
Sbjct: 232 CFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGI 291
Query: 417 ILDGLFKCHFYPEAVSLYRELE---KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQ 473
++D L + EA L E++ +N+DR Y+I + L G L + +F +
Sbjct: 292 LVDALCSKRKFQEATKLLDEIKLVGTVNMDR---AYNIWIRALIKAGFLNNPADFLQKIS 348
Query: 474 A-KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDI 532
+G +++VF Y MV L +E LD +L +M +G PN T N + + G +
Sbjct: 349 PLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFV 408
Query: 533 SRSEKYLQLMKGKGFSADATTTELLINFFSGNKA 566
+ + + GF+ A + LI+ N++
Sbjct: 409 DEALELYRSRSEIGFAPTAMSYNYLIHTLCANES 442
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 153/347 (44%), Gaps = 58/347 (16%)
Query: 241 QPDVVTYNCLTRGLFHCS----RGKVLKKGIM-----PDVHTFSAIVDNYCKEGMIARAE 291
+PD +N + RG F CS R +L + ++ + +TF +++
Sbjct: 77 RPDTFLWNLMIRG-FSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETT 135
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
++ + ++G E +V+ NSLIN++ + + A ++D + P V++N++I G+
Sbjct: 136 QIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPE----PDDVSWNSVIKGY 191
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
K KMD A++L +M K + +W ++ G+ +A M A +L MQ PD
Sbjct: 192 VKAGKMDIALTLFRKMAEK----NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 412 ITYA-----------------------------------IILDGLFKCHFYPEAVSLYRE 436
++ A +++D KC EA+ +++
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
++K + + ++ ++ G +G ++A F +Q G+K +V T+T ++ GL
Sbjct: 308 IKK----KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGL 363
Query: 497 LDDAEQLLMDME-EKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
+++ + + ME + P Y V L R G + +++++Q M
Sbjct: 364 VEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 78/364 (21%), Positives = 157/364 (43%), Gaps = 43/364 (11%)
Query: 91 LVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLC 150
L +RM +++TF ++ LS + + + K+G E D+ + +++N
Sbjct: 102 LYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYA 161
Query: 151 AEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP 210
GN + A L R+ E + + ++I G K G A+ F+K+ + +
Sbjct: 162 VTGNFKLAHLLFDRIPEP----DDVSWNSVIKGYVKAGKMDIALTLFRKMAEK----NAI 213
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPD 270
+T ++ + + EAL L+ EM ++PD V+ L L C++ L++G
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS---LANALSACAQLGALEQG---- 266
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
+ +Y + I R + ++G + LI+ + +M++A++V+
Sbjct: 267 -----KWIHSYLNKTRI-RMDSVLGCV--------------LIDMYAKCGEMEEALEVFK 306
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
++ K S + LI G+ +A+S EM G+ P++ T+ A++ G
Sbjct: 307 NIKKK----SVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTG 362
Query: 391 MPLAAKELISTMQKHGQLPDRIT-YAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIY 449
+ K + +M++ L I Y I+D L + EA R +++M L + I+
Sbjct: 363 LVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEA---KRFIQEMPLKPNAVIW 419
Query: 450 SIML 453
+L
Sbjct: 420 GALL 423
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 110/267 (41%), Gaps = 39/267 (14%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A+ F KMA N +T +I+ V+ A+ L M + +E D+ +
Sbjct: 197 MDIALTLFRKMAEKNAIS----WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
++ +L + G + + K + D V +++ G +E+AL + + +
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA- 228
+ + A+I+G G+ AI F +++ G K +V +TA++ + GLV E
Sbjct: 313 VQAWT----ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGK 368
Query: 229 LGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
L +S ++P + Y C IVD + G++
Sbjct: 369 LIFYSMERDYNLKPTIEHYGC---------------------------IVDLLGRAGLLD 401
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINA 315
A+R F+ + ++PN + +L+ A
Sbjct: 402 EAKR---FIQEMPLKPNAVIWGALLKA 425
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/476 (20%), Positives = 209/476 (43%), Gaps = 34/476 (7%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
+L+S++ + + AV FN++ PN+ LI + A + M
Sbjct: 56 KLISALSLCRQTNLAVRVFNQVQE----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRF 111
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN--GLCAEGNVE 156
G+ AD+FT+ ++ S + + + K+GL DI +++ C V
Sbjct: 112 GLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVR 171
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
A+ L +M E ++ + +++ GL K G A F ++ R D+ + ++
Sbjct: 172 DAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTML 223
Query: 217 DSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLK----KGIMP--D 270
D + +++A L+ +M + + V+++ + G ++ + K +P +
Sbjct: 224 DGYARCREMSKAFELFEKMPER----NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN 279
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYD 330
V T++ I+ Y ++G++ A+RL+ M G++ + S++ A + M+++
Sbjct: 280 VVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHS 339
Query: 331 SMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG 390
+ + N L+ + K + KA + ++ K D+ +WN ++ G G
Sbjct: 340 ILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHG 395
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM-NLDRHITIY 449
A EL S M++ G PD++T+ +L E + + +EK+ +L + Y
Sbjct: 396 HGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHY 455
Query: 450 SIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR-EGLLDDAEQLL 504
++D L GRLK+A +Q ++ +V + ++ G CR +D A+++L
Sbjct: 456 GCLVDLLGRVGRLKEA---IKVVQTMPMEPNVVIWGALL-GACRMHNEVDIAKEVL 507
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/467 (20%), Positives = 200/467 (42%), Gaps = 33/467 (7%)
Query: 89 ISLVKRMHSL----GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTT 144
++ VK++H+ + D +I+ L +T+L V F EP++ +
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRV----FNQVQEPNVHLCNS 87
Query: 145 IVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG 204
++ QA + M G +++T+ ++ +E G
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 205 FKFDVPVYTAIMD--SLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV 262
D+ V A++D S C V +A+ L+ +M+ + D V++N + GL +
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRD 203
Query: 263 LKKGI--MP--DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCL 318
++ MP D+ +++ ++D Y + +++A L M E N ++++++ +
Sbjct: 204 ARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP----ERNTVSWSTMVMGYSK 259
Query: 319 QDQMQDAMKVYDSMIYKGCLPS--TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
M+ A ++D M LP+ VT+ +I G+ + + +A L+ +MV GL D
Sbjct: 260 AGDMEMARVMFDKM----PLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDA 315
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
+++ ++G+ + S +++ + +LD KC +A ++ +
Sbjct: 316 AAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFND 375
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
+ K +L ++ ML GL +G K+A E FS ++ +G++ D T+ ++ GL
Sbjct: 376 IPKKDL----VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGL 431
Query: 497 LDDAEQLLMDMEE-KGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
+D+ ME+ P Y V L R G + + K +Q M
Sbjct: 432 IDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 150/347 (43%), Gaps = 33/347 (9%)
Query: 184 LCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPD 243
LC + A+ ++ G D Y+ ++ + V+E + + G +P
Sbjct: 36 LCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPM 95
Query: 244 VVTYNCLTRGLFHCSRGKVLKKGIMPDVH------------TFSAIVDNYCKEGMIARAE 291
+ N L +K ++ D H +++ ++ Y K + +A
Sbjct: 96 MFLVNVLI--------NMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKAL 147
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
L+ M R V PNV+TY+S++ + C + M D ++ +I +G + LI +
Sbjct: 148 ELLVLMLRDNVRPNVYTYSSVLRS-C--NGMSDVRMLHCGIIKEGLESDVFVRSALIDVF 204
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
K+ + + A+S+ EMV T D WN+++GGF + A EL M++ G + ++
Sbjct: 205 AKLGEPEDALSVFDEMV----TGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSG 471
T +L + + + K D+ + + + ++D C G L+DA F+
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQ 318
Query: 472 LQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
++ + DV T++ M+ GL + G +A +L M+ G PN T
Sbjct: 319 MKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYIT 361
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 114/502 (22%), Positives = 215/502 (42%), Gaps = 45/502 (8%)
Query: 82 MKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLS-RTDLGFCVLGL--MFKMGLEPD 138
MK + I L + + +L S T++++ RL + DL + + + GL D
Sbjct: 1 MKSVMSKIKLFRPVVTLRCSYSSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWAD 60
Query: 139 IVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFK 198
T + ++ + V + + + G+R + +IN K + A F
Sbjct: 61 SATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFD 120
Query: 199 KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG----- 253
++ R +V +T ++ + K + +AL L M ++P+V TY+ + R
Sbjct: 121 QMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMS 176
Query: 254 ---LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYN 310
+ HC ++K+G+ DV SA++D + K G A + M V + +N
Sbjct: 177 DVRMLHCG---IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM----VTGDAIVWN 229
Query: 311 SLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK 370
S+I + A++++ M G + T +++ + ++ M +V
Sbjct: 230 SIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK- 288
Query: 371 GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEA 430
D+ NALV +CK G A + + M++ D IT++ ++ GL + + EA
Sbjct: 289 -YDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMISGLAQNGYSQEA 343
Query: 431 VSLYRELEKMNLD-RHITIYSIMLDGLCSY-GRLKDAREFFSGLQAKGLKIDVFT--YTI 486
+ L+ ++ +ITI ++ CS+ G L+D +F ++ K ID Y
Sbjct: 344 LKLFERMKSSGTKPNYITIVGVLF--ACSHAGLLEDGWYYFRSMK-KLYGIDPVREHYGC 400
Query: 487 MVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
M+ L + G LDDA +LL +ME C P+ T+ + LL + R+ + K
Sbjct: 401 MIDLLGKAGKLDDAVKLLNEME---CEPDAVTW----RTLLGACRVQRNMVLAEYAAKKV 453
Query: 547 FS---ADATTTELLINFFSGNK 565
+ DA T LL N ++ ++
Sbjct: 454 IALDPEDAGTYTLLSNIYANSQ 475
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 124/307 (40%), Gaps = 58/307 (18%)
Query: 87 TAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLG----------------------- 123
A+ L KRM G A+ T T V+ L+ +LG
Sbjct: 243 VALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDM 302
Query: 124 FCVLGLM------FKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTH 177
+C G + F E D++T +T+++GL G ++AL L RM G + N T
Sbjct: 303 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 362
Query: 178 GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV---YTAIMDSLCKDGLVNEALGLWSE 234
++ G YF+ ++ + + D PV Y ++D L K G +++A+ L +E
Sbjct: 363 VGVLFACSHAGLLEDGWYYFRSMK-KLYGID-PVREHYGCMIDLLGKAGKLDDAVKLLNE 420
Query: 235 MTGKGIQPDVVTYNCLTRGLFHCSRGKVL-----KKGIM---PDVHTFSAIVDNYCKEGM 286
M +PD VT+ L G R VL KK I D T++ + + Y
Sbjct: 421 ME---CEPDAVTWRTLL-GACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 287 IARAERLMGFMARVGV--EP--NVFTYNSLINAHCLQD----QMQDAMKVYDSMIYK--- 335
E + M G+ EP + N I+A + D Q+ + K + +I++
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTG 536
Query: 336 -GCLPST 341
G +P T
Sbjct: 537 IGYVPET 543
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 190/490 (38%), Gaps = 98/490 (20%)
Query: 49 TVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFT 108
+ + A F+KM+ +N + +T++I ++M AI M G E+D FT +
Sbjct: 218 SFENAYKVFDKMSELN----VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLS 273
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDI-VTLTTIVNGLCAEGNVEQALGLAMRMDE 167
V + L LG + + GL D+ +L + A+G+V+ + RM++
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMED 333
Query: 168 MGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNE 227
+ S+T A+I G K N L E
Sbjct: 334 --HSVMSWT--ALITGYMKNCN----------------------------------LATE 355
Query: 228 ALGLWSEMTGKG-IQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVHTFSAIV 278
A+ L+SEM +G ++P+ T++ + + S G+ K+G+ + ++++
Sbjct: 356 AINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVI 415
Query: 279 DNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCL 338
+ K + A+R ++ E N+ +YN+ ++ C + A K+ + +
Sbjct: 416 SMFVKSDRMEDAQRAFESLS----EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG 471
Query: 339 PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLT------------------------- 373
S T+ +L+ G + + K + ++V GL+
Sbjct: 472 VSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRV 531
Query: 374 ------PDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY 427
++ +W +++ GF K G + E + M + G P+ +TY IL
Sbjct: 532 FNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLV 591
Query: 428 PEAVSLYRELEKMNLDRHITI----YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
E +R M D I Y+ M+D LC G L DA EF + + + DV
Sbjct: 592 SEG---WRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMP---FQADVLV 645
Query: 484 YTIMVQGLCR 493
+ + G CR
Sbjct: 646 WRTFL-GACR 654
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 102/515 (19%), Positives = 207/515 (40%), Gaps = 32/515 (6%)
Query: 46 DLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSF 105
DL+ +A+D + I P ++ F+ L+ ++ + + + R+ IE DS
Sbjct: 41 DLRGAVSALDLMAR-DGIRPMDSVT-FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSV 98
Query: 106 TFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
+ +I+ + + V M + G + D+V+ + ++ G A+ + +
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVVSWSAMMACYGNNGRELDAIKVFVEF 157
Query: 166 DEMGYRCNSYTHGAIINGLCK---VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCK- 221
E+G N Y + A+I VG +G+ K F+ DV V +++D K
Sbjct: 158 LELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH--FESDVCVGCSLIDMFVKG 215
Query: 222 DGLVNEALGLWSEMTGKGIQPDVVTYN-----CLTRGLFHCSRGKVLK---KGIMPDVHT 273
+ A ++ +M+ + +VVT+ C+ G + L G D T
Sbjct: 216 ENSFENAYKVFDKMS----ELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFT 271
Query: 274 FSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD-QMQDAMKVYDSM 332
S++ + ++ ++L + R G+ +V + A C D + D KV+D M
Sbjct: 272 LSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKM-DKAMSLLGEMVNKG-LTPDICTWNALVGGFCKAG 390
S +++ LI G+ K + +A++L EM+ +G + P+ T+++
Sbjct: 332 EDH----SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS 387
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
P K+++ K G + ++ K +A + L + NL Y+
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNL----VSYN 443
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
LDG C + A + S + + L + FT+ ++ G+ G + EQ+ + +
Sbjct: 444 TFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKL 503
Query: 511 GCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGK 545
G N N + + G I + + M+ +
Sbjct: 504 GLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR 538
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 178/464 (38%), Gaps = 91/464 (19%)
Query: 49 TVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTT-AISLVKRMHSLG-IEADSFT 106
+ D +VD K+ ++ +T LI +K + T AI+L M + G +E + FT
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 107 FTIVINCLCRLSRTDLGFCVLGLMFKMGL------------------------------- 135
F+ LS +G VLG FK GL
Sbjct: 376 FSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLS 435
Query: 136 EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIG 195
E ++V+ T ++G C N EQA L + E +++T ++++G+ VG+
Sbjct: 436 EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQ 495
Query: 196 YFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLF 255
+V G + PV A++ K G ++ A +++ M +
Sbjct: 496 IHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR----------------- 538
Query: 256 HCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
+V ++++++ + K G R M GV+PN TY ++++A
Sbjct: 539 --------------NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSA 584
Query: 316 HCLQDQMQDAMKVYDSMIYKGCL-PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTP 374
+ + + ++SM + P Y ++ C+ + A + M
Sbjct: 585 CSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM---PFQA 641
Query: 375 DICTWNALVGGFCKAGM-----PLAAKELISTMQKHGQLPDRITYAIILDGLFKCH-FYP 428
D+ W +G C+ LAA++++ P+ I L ++ C +
Sbjct: 642 DVLVWRTFLGA-CRVHSNTELGKLAARKILELD------PNEPAAYIQLSNIYACAGKWE 694
Query: 429 EAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDA-REFFSG 471
E+ + R++++ NL + +G CS+ + D +F+ G
Sbjct: 695 ESTEMRRKMKERNLVK---------EGGCSWIEVGDKIHKFYVG 729
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 151/346 (43%), Gaps = 20/346 (5%)
Query: 205 FKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR----- 259
F+ D+ + +++ K G + EA ++ +M Q D VT+ L G R
Sbjct: 91 FRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP----QRDFVTWTTLISGYSQHDRPCDAL 146
Query: 260 ---GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAH 316
++L+ G P+ T S+++ E +L GF + G + NV ++L++ +
Sbjct: 147 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 206
Query: 317 CLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDI 376
M DA V+D++ + + V++N LI G + +KA+ L M+ G P
Sbjct: 207 TRYGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSH 262
Query: 377 CTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRE 436
++ +L G G K + + M K G+ +LD K +A ++
Sbjct: 263 FSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 437 LEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGL 496
L K R + ++ +L +G K+A +F ++ G++ + ++ ++ GL
Sbjct: 323 LAK----RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 497 LDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
LD+ M++ G P Y V L R GD++R+ ++++ M
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEM 424
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 94/484 (19%), Positives = 184/484 (38%), Gaps = 65/484 (13%)
Query: 49 TVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFT 108
+++ A F KM P + +T LI+ + A+ +M G + FT +
Sbjct: 110 SLEEARKVFEKM----PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLS 165
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
VI R G + G K G + ++ + +++ G ++ A + D +
Sbjct: 166 SVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDA---QLVFDAL 222
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEA 228
R N + A+I G + T A+ F+ + GF+ Y ++ + G + +
Sbjct: 223 ESR-NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 229 LGLWSEMTGKGIQPDVVTYNCL-----TRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCK 283
+ + M G + N L G H +R K+ + DV ++++++ Y +
Sbjct: 282 KWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDAR-KIFDRLAKRDVVSWNSLLTAYAQ 340
Query: 284 EGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVT 343
G A M RVG+ PN ++ S++ A + + Y+ M G +P
Sbjct: 341 HGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWH 400
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
Y T++ + +++A+ + EM + P W AL+ C+ M
Sbjct: 401 YVTVVDLLGRAGDLNRALRFIEEM---PIEPTAAIWKALLNA-CR-------------MH 443
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
K+ +L A + +F EL+ + H+ +Y+I G GR
Sbjct: 444 KNTELG-----AYAAEHVF-------------ELDPDDPGPHVILYNIYASG----GRWN 481
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLC------------REGLLDDAEQLLMDMEEKG 511
DA ++ G+K + + ++ RE + E++L ++E G
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Query: 512 CPPN 515
P+
Sbjct: 542 YVPD 545
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/503 (21%), Positives = 206/503 (40%), Gaps = 61/503 (12%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGL--------------------------- 135
DSFTF VI L R LG + L+ K G
Sbjct: 106 DSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVF 165
Query: 136 ----EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTS 191
E D+ + T+++ G E+AL L RM+ G+ NS + I+ ++
Sbjct: 166 DEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLE 225
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
+K +GF+ D V +A++D K + A ++ +M K + V +N +
Sbjct: 226 RGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL----VAWNSMI 281
Query: 252 RGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
+G + ++G +++ +G P T ++I+ + + + + G++ R
Sbjct: 282 KG--YVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV 339
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
V +++ SLI+ + + A V+ S K S +N +I + + KA+
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVF-SKTQKDVAES---WNVMISSYISVGNWFKAV 395
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL 421
+ +MV+ G+ PD+ T+ +++ + K++ ++ + D + + +LD
Sbjct: 396 EVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMY 455
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
KC EA ++ + K + + +++M+ S+G+ ++A F +Q GLK D
Sbjct: 456 SKCGNEKEAFRIFNSIPK----KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDG 511
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEK-GCPPNDCTYNLFVQGLLRRGDISRSEKYLQ 540
T ++ GL+D+ + M K G P Y+ + L R G + + + +Q
Sbjct: 512 VTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571
Query: 541 LMKGKGFSADATTTELLINFFSG 563
+A ELL FS
Sbjct: 572 QTPETSDNA-----ELLSTLFSA 589
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/422 (20%), Positives = 182/422 (43%), Gaps = 29/422 (6%)
Query: 101 EADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALG 160
E D ++ VI+C + + + G M G EP+ V+LT ++ +E+
Sbjct: 170 ERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKE 229
Query: 161 LAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
+ + + G+ + Y + A+++ K A F+K+ + + + +++
Sbjct: 230 IHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKS----LVAWNSMIKGYV 285
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR-----------GKVLKKGIMP 269
G + + + M +G +P T LT L CSR G V++ +
Sbjct: 286 AKGDSKSCVEILNRMIIEGTRPSQTT---LTSILMACSRSRNLLHGKFIHGYVIRSVVNA 342
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
D++ +++D Y K G AE + + E ++N +I+++ A++VY
Sbjct: 343 DIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAE----SWNVMISSYISVGNWFKAVEVY 398
Query: 330 DSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
D M+ G P VT+ +++ ++ ++K + + L D +AL+ + K
Sbjct: 399 DQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKC 458
Query: 390 GMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP-EAVSLYRELEKMNLDRHITI 448
G A + +++ K D +++ +++ + H P EA+ + E++K L
Sbjct: 459 GNEKEAFRIFNSIPK----KDVVSWTVMISA-YGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAK-GLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
+L G + + +FFS +++K G++ + Y+ M+ L R G L +A +++
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQT 573
Query: 508 EE 509
E
Sbjct: 574 PE 575
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/421 (19%), Positives = 163/421 (38%), Gaps = 19/421 (4%)
Query: 56 FFNKMAAINPFP--NIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINC 113
F N + + P ++ + +I+ + A+ L RM S G E +S + T+ I+
Sbjct: 158 FENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISA 217
Query: 114 LCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN--GLCAEGNVEQALGLAMRMDEMGYR 171
RL + G + K G E D + +V+ G C L +A + + R
Sbjct: 218 CSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKC------DCLEVAREVFQKMPR 271
Query: 172 CNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGL 231
+ ++I G G++ + + ++ G + T+I+ + + + +
Sbjct: 272 KSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Query: 232 WSEMTGKGIQPDVVTYNCLTRGLFHCSRGK----VLKKGIMPDVHTFSAIVDNYCKEGMI 287
+ + D+ L F C V K +++ ++ +Y G
Sbjct: 332 HGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNW 391
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL 347
+A + M VGV+P+V T+ S++ A ++ +++ S+ + + L
Sbjct: 392 FKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSAL 451
Query: 348 IHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQ 407
+ + K +A + + K D+ +W ++ + G P A MQK G
Sbjct: 452 LDMYSKCGNEKEAFRIFNSIPKK----DVVSWTVMISAYGSHGQPREALYQFDEMQKFGL 507
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELE-KMNLDRHITIYSIMLDGLCSYGRLKDAR 466
PD +T +L E + + ++ K ++ I YS M+D L GRL +A
Sbjct: 508 KPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAY 567
Query: 467 E 467
E
Sbjct: 568 E 568
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 166/415 (40%), Gaps = 60/415 (14%)
Query: 51 DAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIV 110
+ A++ F +M + PN TV I+ ++ + ++ G E D + + +
Sbjct: 190 EKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSAL 249
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
++ + ++ V M + L V +++ G A+G+ + + + RM G
Sbjct: 250 VDMYGKCDCLEVAREVFQKMPRKSL----VAWNSMIKGYVAKGDSKSCVEILNRMIIEGT 305
Query: 171 RCNSYT---------------HGAIINGLCKVGNTSAAIG--------YFK--------K 199
R + T HG I+G +A I YFK
Sbjct: 306 RPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAET 365
Query: 200 VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR 259
V + K + ++ S G +A+ ++ +M G++PDVVT+ T L CS+
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTF---TSVLPACSQ 422
Query: 260 GKVLKKG-----------IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFT 308
L+KG + D SA++D Y K G A R+ + + +V +
Sbjct: 423 LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK----KDVVS 478
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
+ +I+A+ Q ++A+ +D M G P VT ++ +D+ + +M
Sbjct: 479 WTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMR 538
Query: 369 NK-GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
+K G+ P I ++ ++ +AG L A E+I Q P+ A +L LF
Sbjct: 539 SKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ------QTPETSDNAELLSTLF 587
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 116/570 (20%), Positives = 216/570 (37%), Gaps = 97/570 (17%)
Query: 53 AVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVIN 112
A F++M P NI F LI+ +M Y A+ L ++ D FT+ +
Sbjct: 101 ARQLFDRM----PERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 113 CLCRLSRTDLGFCVLGLMFKMGL-------------------------------EPDIVT 141
DLG + GL+ GL E D V+
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 142 LTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKK-- 199
++++G G E+ L L +M G +Y G+++ C N G+ +K
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE----GFIEKGM 272
Query: 200 -----VEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
G +FD+ V TA++D K+G + EA+ L+S M K +VVTYN + G
Sbjct: 273 AIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK----NVVTYNAMISGF 328
Query: 255 FHCSR-------------GKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
+ ++G+ P TFS ++ + ++ + +
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNN 388
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
+ + F ++LI + L +D M+ + S + ++ ++I + ++++ A
Sbjct: 389 FQSDEFIGSALIELYALMGSTEDGMQCFASTSKQ----DIASWTSMIDCHVQNEQLESAF 444
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII--LD 419
L ++ + + P+ T + ++ C L++ E I YAI +D
Sbjct: 445 DLFRQLFSSHIRPEEYTVSLMMSA-CADFAALSSGEQIQG------------YAIKSGID 491
Query: 420 GLFKCHFYPEAVSLYRELEKMNLDRHITI---------YSIMLDGLCSYGRLKDAREFFS 470
++S+Y + M L + I YS M+ L +G +A F
Sbjct: 492 AFTSVK--TSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFE 549
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME-EKGCPPNDCTYNLFVQGLLRR 529
++ G+K + + ++ C GL+ + M+ + PN+ + V L R
Sbjct: 550 SMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRT 609
Query: 530 GDISRSEKYLQLMKGKGFSADATTTELLIN 559
G +S +E L+ GF T L++
Sbjct: 610 GRLSDAEN---LILSSGFQDHPVTWRALLS 636
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAE----GNVEQA 158
D ++T +I+C + + + F + +F + P+ T++ +++ CA+ + EQ
Sbjct: 423 DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSA-CADFAALSSGEQI 481
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDS 218
G A++ G + + I+ K GN A F +V+ DV Y+A++ S
Sbjct: 482 QGYAIKS---GIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNP----DVATYSAMISS 534
Query: 219 LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKG------------ 266
L + G NEAL ++ M GI+P+ + + L C G ++ +G
Sbjct: 535 LAQHGSANEALNIFESMKTHGIKPNQQAFLGV---LIACCHGGLVTQGLKYFQCMKNDYR 591
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
I P+ F+ +VD + G ++ AE L + G + + T+ +L+++
Sbjct: 592 INPNEKHFTCLVDLLGRTGRLSDAENL---ILSSGFQDHPVTWRALLSS 637
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/418 (22%), Positives = 174/418 (41%), Gaps = 53/418 (12%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
+ +++ K +D AV +M PN+ + L V H ++ L RM
Sbjct: 810 QFITACTSFKRLDLAVSTMTQMQE----PNVFVYNALFKGFVTCSHPIRSLELYVRMLRD 865
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
+ S+T++ ++ SR G + ++K G + TT+++ A G + +A
Sbjct: 866 SVSPSSYTYSSLVKASSFASR--FGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREA 923
Query: 159 LGLAMRMDEM----------GYR-----------------CNSYTHGAIINGLCKVGNTS 191
+ M E YR N T +ING +GN
Sbjct: 924 RKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLE 983
Query: 192 AAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLT 251
A F ++ + D+ +T ++ ++ EA+ ++ +M +GI PD VT + +
Sbjct: 984 QAESLFNQMPVK----DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVI 1039
Query: 252 RGLFH---CSRGK-----VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVE 303
H GK L+ G + DV+ SA+VD Y K G + RA L+ F +
Sbjct: 1040 SACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERA--LLVFFNL--PK 1095
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
N+F +NS+I Q+A+K++ M + P+ VT+ ++ +D+ +
Sbjct: 1096 KNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRI 1155
Query: 364 LGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
M++ + ++ + +V F KAG+ A ELI M+ P+ + + +LDG
Sbjct: 1156 YRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFE---PNAVIWGALLDG 1210
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 168/401 (41%), Gaps = 57/401 (14%)
Query: 111 INCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGY 170
I R DL + M EP++ + G + ++L L +RM
Sbjct: 812 ITACTSFKRLDLAVSTMTQM----QEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSV 867
Query: 171 RCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGR----GFKFDVPVYTAIMDSLCKDGLVN 226
+SYT+ +++ +S A + + ++ GF F V + T ++D G +
Sbjct: 868 SPSSYTYSSLVKA------SSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIR 921
Query: 227 EALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGM 286
EA ++ EM + D + + + V + ++D
Sbjct: 922 EARKVFDEMPER----DDIAWTTM--------------------VSAYRRVLD------- 950
Query: 287 IARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
+ A L M+ E N T N LIN + ++ A +++ M K +++ T
Sbjct: 951 MDSANSLANQMS----EKNEATSNCLINGYMGLGNLEQAESLFNQMPVK----DIISWTT 1002
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG 406
+I G+ + K+ +A+++ +M+ +G+ PD T + ++ G+ KE+ ++G
Sbjct: 1003 MIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNG 1062
Query: 407 QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
+ D + ++D KC A+ ++ L K NL ++ +++GL ++G ++A
Sbjct: 1063 FVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNL----FCWNSIIEGLAAHGFAQEAL 1118
Query: 467 EFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDM 507
+ F+ ++ + +K + T+ + GL+D+ ++ M
Sbjct: 1119 KMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/323 (21%), Positives = 144/323 (44%), Gaps = 30/323 (9%)
Query: 241 QPDVVTYNCLTRGLFHCSRG--------KVLKKGIMPDVHTFSAIVDNYCKEGMIAR-AE 291
+P+V YN L +G CS ++L+ + P +T+S++V +R E
Sbjct: 833 EPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVK---ASSFASRFGE 889
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
L + + G +V +LI+ + ++++A KV+D M + + + T++ +
Sbjct: 890 SLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAY 945
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
++ MD A SL +M K + T N L+ G+ G A+ L + M + D
Sbjct: 946 RRVLDMDSANSLANQMSEK----NEATSNCLINGYMGLGNLEQAESLFNQM----PVKDI 997
Query: 412 ITYAIILDGLFKCHFYPEAVSL-YRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
I++ ++ G + Y EA+++ Y+ +E+ + +T+ S ++ G L+ +E
Sbjct: 998 ISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTM-STVISACAHLGVLEIGKEVHM 1056
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
G +DV+ + +V + G L+ A + ++ +K N +N ++GL G
Sbjct: 1057 YTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK----NLFCWNSIIEGLAAHG 1112
Query: 531 DISRSEKYLQLMKGKGFSADATT 553
+ K M+ + +A T
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVT 1135
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 20/222 (9%)
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
N I K++D A+S + +M P++ +NAL GF P+ + EL M +
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQE----PNVFVYNALFKGFVTCSHPIRSLELYVRMLR 864
Query: 405 HGQLPDRITY-AIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLK 463
P TY +++ F F SL + K H+ I + ++D + GR++
Sbjct: 865 DSVSPSSYTYSSLVKASSFASRF---GESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIR 921
Query: 464 DAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFV 523
+AR+ F + + D +T MV R +D A L M EK N+ T N +
Sbjct: 922 EARKVFDEMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLI 973
Query: 524 QGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFSGNK 565
G + G++ ++E M K D + +I +S NK
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVK----DIISWTTMIKGYSQNK 1011
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/260 (19%), Positives = 103/260 (39%), Gaps = 14/260 (5%)
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
EPNVF YN+L ++++Y M+ PS+ TY++L+ + + S
Sbjct: 833 EPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGE--S 890
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
L + G + L+ + G A+++ M + D I + ++
Sbjct: 891 LQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPER----DDIAWTTMVSAYR 946
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVF 482
+ A SL ++ + N + +++G G L+ A F+ + K D+
Sbjct: 947 RVLDMDSANSLANQMSEKNE----ATSNCLINGYMGLGNLEQAESLFNQMPVK----DII 998
Query: 483 TYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
++T M++G + +A + M E+G P++ T + + G + ++
Sbjct: 999 SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYT 1058
Query: 543 KGKGFSADATTTELLINFFS 562
GF D L++ +S
Sbjct: 1059 LQNGFVLDVYIGSALVDMYS 1078
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 184/428 (42%), Gaps = 39/428 (9%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
+D A+ F+ M A N I ++LI + A L + E D+F++ I
Sbjct: 77 IDGALRVFHGMRAKN---TITWNSLLIGISKDPSRMMEAHQLFDEIP----EPDTFSYNI 129
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+++C R ++ F F D + T++ G G +E+A L M E
Sbjct: 130 MLSCYVR----NVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEK- 184
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
N + A+I+G + G+ A +FK RG V +TA++ K V A
Sbjct: 185 ---NEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKAKKVELAE 237
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGK--------VLKKGIMPDVHTFSAIVDNY 281
++ +MT + ++VT+N + G SR + +L++GI P+ S+ +
Sbjct: 238 AMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGC 294
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
+ + ++ +++ + +V SLI+ +C ++ DA K+++ M K
Sbjct: 295 SELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DV 350
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
V +N +I G+ + DKA+ L EM++ + PD T+ A++ AG+ +
Sbjct: 351 VAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFES 410
Query: 402 MQKHGQL-PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M + ++ P Y ++D L + EA+ L R M H ++ +L G C
Sbjct: 411 MVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRS---MPFRPHAAVFGTLL-GACRVH 466
Query: 461 RLKDAREF 468
+ + EF
Sbjct: 467 KNVELAEF 474
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 153/343 (44%), Gaps = 26/343 (7%)
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+++++ +++ + N A +F ++ FK D + ++ + G + +A L+
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMP---FK-DAASWNTMITGYARRGEMEKARELF 178
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHC----SRGKVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
M K + V++N + G C K + V ++A++ Y K +
Sbjct: 179 YSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
AE + M V N+ T+N++I+ + + +D +K++ +M+ +G P++ ++ +
Sbjct: 235 LAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSAL 291
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
G ++ + + + L D+ +L+ +CK G A +L M+K
Sbjct: 292 LGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK---- 347
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYREL--EKMNLDRHITIYSIMLDGLCSYGRLKDAR 466
D + + ++ G + +A+ L+RE+ K+ D IT +++L C++ L +
Sbjct: 348 KDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPD-WITFVAVLL--ACNHAGLVNIG 404
Query: 467 EFFSGLQAKGLKIDVFT--YTIMVQGLCREGLLDDAEQLLMDM 507
+ + K++ YT MV L R G L++A +L+ M
Sbjct: 405 MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/268 (18%), Positives = 108/268 (40%), Gaps = 54/268 (20%)
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
EP+ F+YN +++ + + A +D M +K ++NT+I G+ + +M+KA
Sbjct: 121 EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARE 176
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
L M+ K + +WNA++ G+ + G A G + + ++ G
Sbjct: 177 LFYSMMEK----NEVSWNAMISGYIECGDLEKASHFFKVAPVRGV----VAWTAMITGYM 228
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI--- 479
K A +++++ M +++++ ++ M+ G R +D + F + +G++
Sbjct: 229 KAKKVELAEAMFKD---MTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS 285
Query: 480 --------------------------------DVFTYTIMVQGLCREGLLDDAEQLLMDM 507
DV T ++ C+ G L DA +L M
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 508 EEKGCPPNDCTYNLFVQGLLRRGDISRS 535
++K +N + G + G+ ++
Sbjct: 346 KKKDV----VAWNAMISGYAQHGNADKA 369
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 106/258 (41%), Gaps = 20/258 (7%)
Query: 305 NVFTYNSL-INAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
N T+NSL I +M +A +++D + P T +YN ++ + + +KA S
Sbjct: 91 NTITWNSLLIGISKDPSRMMEAHQLFDEIPE----PDTFSYNIMLSCYVRNVNFEKAQSF 146
Query: 364 LGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFK 423
M K D +WN ++ G+ + G A+EL +M + + +++ ++ G +
Sbjct: 147 FDRMPFK----DAASWNTMITGYARRGEMEKARELFYSMMEKNE----VSWNAMISGYIE 198
Query: 424 CHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFT 483
C +A + K+ R + ++ M+ G +++ A F + ++ T
Sbjct: 199 CGDLEKASHFF----KVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNK---NLVT 251
Query: 484 YTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMK 543
+ M+ G +D +L M E+G PN + + G + + Q++
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 544 GKGFSADATTTELLINFF 561
D T LI+ +
Sbjct: 312 KSTLCNDVTALTSLISMY 329
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 194/454 (42%), Gaps = 39/454 (8%)
Query: 59 KMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLS 118
K+ A P P++ F V+I K A+ L +M S GIE D +T ++ C LS
Sbjct: 187 KVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLS 246
Query: 119 RTDLGFCVLGLMFKMGLEPDIVTLTTIVNGL------CAEGNVEQALGLAMRMDEMGYRC 172
LG V G + + G P + + N L C E GLA R + +
Sbjct: 247 DIRLGKGVHGWIERRG--PVYSSNLILSNALLDMYFKCKES------GLAKRAFDAMKKK 298
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL-GL 231
+ + ++ G ++G+ AA F ++ R D+ + +++ K G + L
Sbjct: 299 DMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR----DLVSWNSLLFGYSKKGCDQRTVREL 354
Query: 232 WSEMT-GKGIQPDVVTYNCLTRG------LFH--CSRGKVLKKGIMPDVHTFSAIVDNYC 282
+ EMT + ++PD VT L G L H G V++ + D SA++D YC
Sbjct: 355 FYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYC 414
Query: 283 KEGMIARAERLMGFMA-RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
K G+I RA FM + E +V + S+I Q A++++ M +G P+
Sbjct: 415 KCGIIERA-----FMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKELIS 400
VT ++ +++ + + M +K G P+ + +LV C+AG AK+++
Sbjct: 470 VTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
Query: 401 TMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
+K P + + IL A EL K+ ++ Y ++ + + G
Sbjct: 530 --KKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKE-GGYVLLSNIYATVG 586
Query: 461 RLKDAREFFSGLQAKGLKIDV-FTYTIMVQGLCR 493
R + + ++ +G+K ++ + V+GL R
Sbjct: 587 RWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHR 620
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 146/349 (41%), Gaps = 47/349 (13%)
Query: 174 SYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWS 233
+Y +++ ++GN G +KV R DV + ++ K G EAL L+
Sbjct: 166 NYLWNSLVKFYMELGN----FGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYF 221
Query: 234 EMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERL 293
+M GI+PD T L H S + L KG+
Sbjct: 222 KMVSDGIEPDEYTVLSLLVCCGHLSDIR-LGKGV-------------------------- 254
Query: 294 MGFMARVG--VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
G++ R G N+ N+L++ + + A + +D+M K ++NT++ G+
Sbjct: 255 HGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKK----DMRSWNTMVVGF 310
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGM-PLAAKELISTMQKHGQL-P 409
++ M+ A ++ +M + D+ +WN+L+ G+ K G +EL M ++ P
Sbjct: 311 VRLGDMEAAQAVFDQMPKR----DLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKP 366
Query: 410 DRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFF 469
DR+T ++ G ++ + ++ L + S ++D C G ++ A F
Sbjct: 367 DRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVF 426
Query: 470 SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
K DV +T M+ GL G A QL M+E+G PN+ T
Sbjct: 427 KTATEK----DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVT 471
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 84/400 (21%), Positives = 163/400 (40%), Gaps = 34/400 (8%)
Query: 86 TTAISLVKRMHSLGIEADSFTF-TIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTT 144
++ +S VK++H I + + + N L + F V +F PD+ +
Sbjct: 143 SSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNV 202
Query: 145 IVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRG 204
++ G +G +AL L +M G + YT +++ + + G +E RG
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRG 262
Query: 205 FKFDVPVYT-------AIMDSL--CKD-GLVNEALGLWSEMTGKGIQPDVVTYNCLTRGL 254
PVY+ A++D CK+ GL A M K D+ ++N + G
Sbjct: 263 -----PVYSSNLILSNALLDMYFKCKESGLAKRAF---DAMKKK----DMRSWNTMVVGF 310
Query: 255 FHCSRGKVLKKGI--MP--DVHTFSAIVDNYCKEGMIARAERLMGFMARV--GVEPNVFT 308
+ + MP D+ ++++++ Y K+G R R + + + V+P+ T
Sbjct: 311 VRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVT 370
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMV 368
SLI+ ++ V+ +I + LI +CK +++A +
Sbjct: 371 MVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT 430
Query: 369 NKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYP 428
K D+ W +++ G G A +L MQ+ G P+ +T +L
Sbjct: 431 EK----DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVE 486
Query: 429 EAVSLYREL-EKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
E + ++ + +K D Y ++D LC GR+++A++
Sbjct: 487 EGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKD 526
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 129/290 (44%), Gaps = 28/290 (9%)
Query: 241 QPDVVTYNCLTRG------------LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIA 288
+P+++ +N + RG L+ C ++ G++P+ +TF ++ + K
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVC----MISLGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
+++ G + ++G + +++ + SLI+ + +++DA KV+D ++ V+Y LI
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTALI 207
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQL 408
G+ ++ A L E+ K D+ +WNA++ G+ + G A EL M K
Sbjct: 208 KGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREF 468
PD T ++ + ++ ++ ++ I + ++D G L+ A
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 469 FSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCT 518
F L K DV ++ ++ G L +A L +M G PND T
Sbjct: 324 FERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT 369
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 171/405 (42%), Gaps = 58/405 (14%)
Query: 62 AINPFPNIKEFTVLINLVVKMKHY-----TTAISLVKRMHSLGIEADSFTFTIVINCLCR 116
AI+ F I+E +LI + H +A+ L M SLG+ +S+TF V+ +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 117 LSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYT 176
G + G + K+G + D+ T++++ G +E A + D+ +R + +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV---FDKSPHR-DVVS 202
Query: 177 HGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMT 236
+ A+I G G A F ++ + DV + A++ + G EAL L+ +M
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 237 GKGIQPD-----VVTYNCLTRGLFHCSRGKVL---KKGIMPDVHTFSAIVDNYCKEGMIA 288
++PD V C G R L G ++ +A++D Y K G +
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL- 317
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
E G R+ + +V ++N+LI + + ++A+ ++ M+ G P+ VT +++
Sbjct: 318 --ETACGLFERLPYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL 374
Query: 349 HG-----------WC------KIKKMDKAMSLLGEMV----------------NKGLTPD 375
W ++K + A SL ++ N L
Sbjct: 375 PACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKS 434
Query: 376 ICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDG 420
+ +WNA++ GF G A+ +L S M+K G PD IT+ +L
Sbjct: 435 LSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSA 479
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 39/300 (13%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGN 189
M K + PD T+ T+V+ G++E + + +D+ G+ N A+I+ K G
Sbjct: 257 MMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGE 316
Query: 190 TSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNC 249
A G F+++ + DV + ++ L EAL L+ EM G P+ VT
Sbjct: 317 LETACGLFERLPYK----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVT--- 369
Query: 250 LTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTY 309
+ L C+ + G +H + +D K GV
Sbjct: 370 MLSILPACAHLGAIDIGRW--IHVY---IDKRLK-----------------GVTNASSLR 407
Query: 310 NSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVN 369
SLI+ + ++ A +V++S+++K S ++N +I G+ + D + L M
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHK----SLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 370 KGLTPDICTWNALVGGFCKAGMPLAAKELISTM-QKHGQLPDRITYAIILD-----GLFK 423
G+ PD T+ L+ +GM + + TM Q + P Y ++D GLFK
Sbjct: 464 IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/260 (20%), Positives = 102/260 (39%), Gaps = 43/260 (16%)
Query: 303 EPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMS 362
EPN+ +N++ H L A+K+Y MI G LP++ T+ ++ K K +
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 363 LLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLF 422
+ G ++ G D+ LIS ++G+L D
Sbjct: 156 IHGHVLKLGCDLDL----------------YVHTSLISMYVQNGRLEDA----------- 188
Query: 423 KCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVF 482
++ +K + R + Y+ ++ G S G +++A++ F + K DV
Sbjct: 189 -----------HKVFDK-SPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVV 232
Query: 483 TYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLM 542
++ M+ G G +A +L DM + P++ T V + G I + +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 543 KGKGFSADATTTELLINFFS 562
GF ++ LI+ +S
Sbjct: 293 DDHGFGSNLKIVNALIDLYS 312
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 88/429 (20%), Positives = 188/429 (43%), Gaps = 30/429 (6%)
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGN 154
+HS+ SF++ +++ + + G PD+ T +
Sbjct: 62 LHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSG 121
Query: 155 VEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTA 214
+ + + + +MG+ + Y ++++ G + A F ++ R DV +T
Sbjct: 122 IREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVR----DVVSWTG 177
Query: 215 IMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL--TRGLFHC-SRGK-----VLKKG 266
I+ + GL EAL +S+M ++P++ TY C+ + G C S GK +LK+
Sbjct: 178 IITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA 234
Query: 267 IMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA--HCLQDQMQD 324
+ + T +A++D Y K ++ A R+ G + + + ++NS+I+ HC ++ ++
Sbjct: 235 SLISLETGNALIDMYVKCEQLSDAMRVFGELEK----KDKVSWNSMISGLVHC--ERSKE 288
Query: 325 AMKVYDSM-IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALV 383
A+ ++ M G P +++ + +D + ++ G+ D A+V
Sbjct: 289 AIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIV 348
Query: 384 GGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLD 443
+ K G A E+ + ++ + T+ +L GL E++ + E+ K+
Sbjct: 349 DMYAKCGYIETALEIFNGIRS----KNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKI--DVFTYTIMVQGLCREGLLDDAE 501
++ + L+ C G + + R +F ++++ + + Y M+ LCR GLLD+A
Sbjct: 405 PNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEAL 464
Query: 502 QLLMDMEEK 510
+L+ M K
Sbjct: 465 ELVKAMPVK 473
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/381 (20%), Positives = 156/381 (40%), Gaps = 16/381 (4%)
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+S+++ +++ I +K GF D+ + + + K + E +
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 233 SEMTGKGIQPDVVTYNCLTRGLFHC--SRGKVLKKGIMP--DVHTFSAIVDNYCKEGMIA 288
+T G D+ N L C SR G MP DV +++ I+ + + G+
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 289 RAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLI 348
A + +++ VEPN+ TY ++ + + ++ ++ + L S T N LI
Sbjct: 190 EA---LDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 349 HGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ-KHGQ 407
+ K +++ AM + GE+ K D +WN+++ G A +L S MQ G
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKK----DKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGI 302
Query: 408 LPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDARE 467
PD +L ++ + + I + ++D G ++ A E
Sbjct: 303 KPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALE 362
Query: 468 FFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLL 527
F+G+++K +VFT+ ++ GL G ++ + +M + G PN T+ +
Sbjct: 363 IFNGIRSK----NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACC 418
Query: 528 RRGDISRSEKYLQLMKGKGFS 548
G + +Y MK + ++
Sbjct: 419 HTGLVDEGRRYFHKMKSREYN 439
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 133/328 (40%), Gaps = 63/328 (19%)
Query: 138 DIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYF 197
D+V+ T I+ G G ++AL +MD N T+ ++ +VG S G
Sbjct: 171 DVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVGCLSLGKGIH 227
Query: 198 KKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHC 257
+ R + A++D K +++A+ ++ E+ K D V++N + GL HC
Sbjct: 228 GLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKK----DKVSWNSMISGLVHC 283
Query: 258 SRGK--------------------------------------------VLKKGIMPDVHT 273
R K +L GI D H
Sbjct: 284 ERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHI 343
Query: 274 FSAIVDNYCKEGMIARA-ERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
+AIVD Y K G I A E G ++ NVFT+N+L+ + ++++ ++ M
Sbjct: 344 GTAIVDMYAKCGYIETALEIFNGIRSK-----NVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNK--GLTPDICTWNALVGGFCKAG 390
+ G P+ VT+ ++ C +D+ +M ++ L P + + ++ C+AG
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 391 MPLAAKELISTMQKHGQLPD-RITYAII 417
+ A EL+ M PD RI AI+
Sbjct: 459 LLDEALELVKAMPVK---PDVRICGAIL 483
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/349 (20%), Positives = 140/349 (40%), Gaps = 53/349 (15%)
Query: 246 TYNCLTRGLFHCSRGKV--------LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFM 297
+YN L C + +V + G PD+ TF + K I +++ G +
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM-------------------IYKGCL 338
++G +++ NSL++ + + + ++A KV+ M +YK L
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 339 ---------PSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKA 389
P+ TY ++ ++ + + G ++ + + T NAL+ + K
Sbjct: 193 DTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKC 252
Query: 390 GMPLAAKELISTMQKHGQLP--DRITYAIILDGLFKCHFYPEAVSLYRELEK---MNLDR 444
++L M+ G+L D++++ ++ GL C EA+ L+ ++ + D
Sbjct: 253 ------EQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDG 306
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
HI + +L S G + R + G+K D T +V + G ++ A ++
Sbjct: 307 HIL--TSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIF 364
Query: 505 MDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATT 553
+ K N T+N + GL G S +Y + M GF + T
Sbjct: 365 NGIRSK----NVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVT 409
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 124/285 (43%), Gaps = 44/285 (15%)
Query: 42 SSMRDLKTVDAAVDFFNKMA----AINPFPNIKE-----FTVLINLVVKMKHYTTAISLV 92
+S+ L+T +A +D + K A+ F +++ + +I+ +V + AI L
Sbjct: 234 ASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLF 293
Query: 93 KRMH-SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCA 151
M S GI+ D T V++ L D G V + G++ D T IV+
Sbjct: 294 SLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAK 353
Query: 152 EGNVEQALGLAMRMDEMGYRC-NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP 210
G +E AL + G R N +T A++ GL G+ ++ YF+++ GFK ++
Sbjct: 354 CGYIETALEIFN-----GIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLV 408
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPD 270
+ A +++ C GLV+E R FH + K + + P
Sbjct: 409 TFLAALNACCHTGLVDEG-----------------------RRYFH--KMKSREYNLFPK 443
Query: 271 VHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINA 315
+ + ++D C+ G++ A L+ M V+P+V ++++A
Sbjct: 444 LEHYGCMIDLLCRAGLLDEALELVKAMP---VKPDVRICGAILSA 485
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 115/554 (20%), Positives = 228/554 (41%), Gaps = 70/554 (12%)
Query: 35 PKRRELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKR 94
P L D + ++ A+ F++M + F + V+I Y A+ R
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFL----WNVMIKGFTSCGLYIEAVQFYSR 120
Query: 95 MHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGL------------------- 135
M G++AD+FT+ VI + +S + G + ++ K+G
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 136 ------------EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIING 183
E DIV+ ++++G A G+ +L L M + G++ + ++ + +
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 184 LCKVGNTSAAIG---YFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGI 240
V S +G + V R DV V T+I+D K G V+ A +++ M I
Sbjct: 241 CSHV--YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM----I 294
Query: 241 QPDVVTYN----CLTRG-----LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAE 291
Q ++V +N C R F C + + G+ PDV T N I
Sbjct: 295 QRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVIT----SINLLPASAILEGR 350
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
+ G+ R G P++ +LI+ + Q++ A ++D M K + +++N++I +
Sbjct: 351 TIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEK----NVISWNSIIAAY 406
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
+ K A+ L E+ + L PD T +++ + ++ +E+ + + K +
Sbjct: 407 VQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSN- 465
Query: 412 ITYAIILDGLFKCHFYPEAVSLYRELEKMN--LDRHITIYSIMLDGLCSYGRLKDAREFF 469
IIL+ L H Y L + N L + + ++ ++ +G + + F
Sbjct: 466 ---TIILNSL--VHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 470 SGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME-EKGCPPNDCTYNLFVQGLLR 528
S + A + + T+ ++ G++D+ + M+ E G P Y + + R
Sbjct: 521 SEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGR 580
Query: 529 RGDISRSEKYLQLM 542
G+ S ++++L+ M
Sbjct: 581 TGNFSAAKRFLEEM 594
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/491 (21%), Positives = 201/491 (40%), Gaps = 80/491 (16%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNV---EQALGLAMRMDEMGYRCNSYTHGAIINGLCK 186
+F + + D+VT T+++G + G + E+A L DEM R +S++ +I+G K
Sbjct: 93 LFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKL---FDEMPSR-DSFSWNTMISGYAK 148
Query: 187 VGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQP---- 242
A+ F+K+ R + ++A++ C++G V+ A+ L+ +M K P
Sbjct: 149 NRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCAL 204
Query: 243 --DVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLM------ 294
++ L+ + + L G V+ ++ ++ Y + G + A L
Sbjct: 205 VAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDL 264
Query: 295 -----GFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIH 349
G R NV ++NS+I A+ + A ++D M + T+++NT+I
Sbjct: 265 CGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMID 320
Query: 350 GWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAG-MPLAAKELISTMQKHGQL 408
G+ + +M+ A +L EM N+ D +WN +V G+ G + LA T +KH
Sbjct: 321 GYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEKHT-- 374
Query: 409 PDRITYAIILDGLFKCHFYPEAVSLY--RELEKMNLDRH--------------------- 445
+++ I+ K Y EAV L+ +E D H
Sbjct: 375 ---VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQM 431
Query: 446 -----------ITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCRE 494
+ +++ ++ G + ++R F ++ LK +V T+ M+ G
Sbjct: 432 HQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFH 488
Query: 495 GLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSE-KYLQLMKGKGFSADATT 553
G +A L M+ G P+ T+ + G + ++ +++ +M
Sbjct: 489 GNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEH 548
Query: 554 TELLINFFSGN 564
L+N SG
Sbjct: 549 YSSLVNVTSGQ 559
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/502 (21%), Positives = 205/502 (40%), Gaps = 56/502 (11%)
Query: 48 KTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTF 107
+ + A+ F KM P N ++ +I + +A+ L ++M DS
Sbjct: 150 RRIGEALLLFEKM----PERNAVSWSAMITGFCQNGEVDSAVVLFRKMPV----KDSSPL 201
Query: 108 TIVINCLCRLSRTDLGFCVLGLMFKM--GLEPDIVTLTTIVNGLCAEGNVEQALGLAMRM 165
++ L + R VLG + G E + T++ G G VE A L
Sbjct: 202 CALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCL---F 258
Query: 166 DEMGYRC--------------NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPV 211
D++ C N + ++I KVG+ +A F +++ R D
Sbjct: 259 DQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTIS 314
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV-LKKGIM-- 268
+ ++D + +A L+SEM + D ++N + G + S G V L +
Sbjct: 315 WNTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSG--YASVGNVELARHYFEK 368
Query: 269 -PDVHTFS--AIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDA 325
P+ HT S +I+ Y K A L M G +P+ T SL++A ++
Sbjct: 369 TPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG 428
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
M+++ ++ K +P +N LI + + ++ ++ + EM L ++ TWNA++GG
Sbjct: 429 MQMHQ-IVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEM---KLKREVITWNAMIGG 484
Query: 386 FCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM-NLDR 444
+ G A L +M+ +G P IT+ +L+ EA + + + + ++
Sbjct: 485 YAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEP 544
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR----EGLLDDA 500
+ YS +++ G+ ++A + + + D + ++ CR GL A
Sbjct: 545 QMEHYSSLVNVTSGQGQFEEAMYIITSMP---FEPDKTVWGALLDA-CRIYNNVGLAHVA 600
Query: 501 EQLLMDMEEKGCPPNDCTYNLF 522
+ + +E + P YN++
Sbjct: 601 AEAMSRLEPESSTPYVLLYNMY 622
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 19/197 (9%)
Query: 340 STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELI 399
+TVT+NT+I G+ K ++M++A L M + D+ TWN ++ G+ G + L
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNTMISGYVSCG---GIRFLE 122
Query: 400 STMQKHGQLPDR--ITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLC 457
+ ++P R ++ ++ G K EA+ L+ EKM +R+ +S M+ G C
Sbjct: 123 EARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLF---EKMP-ERNAVSWSAMITGFC 178
Query: 458 SYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDC 517
G + A F + K D +V GL + L +A +L D
Sbjct: 179 QNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDL 234
Query: 518 --TYNLFVQGLLRRGDI 532
YN + G +RG +
Sbjct: 235 VYAYNTLIVGYGQRGQV 251
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 112/239 (46%), Gaps = 24/239 (10%)
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEM-TGKGIQ--PDVVTYNCLTRGLFHCSRGKVLKKGI 267
+Y +I+ K G + A+ ++ M T K ++ P + TY+ L + L RG
Sbjct: 209 LYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALL--GRGN------ 260
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
++Y + L M G+EP+VF N L+ + L + DA++
Sbjct: 261 -----------NSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALR 309
Query: 328 VYDSM-IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGF 386
++ M + C P++ TY+ LIHG C + A LL EM KG P+ ++N+LV F
Sbjct: 310 IFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAF 369
Query: 387 CKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYREL-EKMNLDR 444
+G A + + M ++G++ D I+Y ++D + Y EA L L EK +DR
Sbjct: 370 ALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDR 428
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 81/168 (48%), Gaps = 10/168 (5%)
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGL---FHCSRG-KVLKKGIM-----PDVHTFSAIVDN 280
L+ +M GI+PDV NCL +G H + ++ + + P+ T+ ++
Sbjct: 274 SLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHG 333
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
C +G A L+ M G PN +YNSL+NA L ++ DA+K MI G +
Sbjct: 334 LCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVD 393
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
++Y TL+ C+ K D+A LL EM+ + D +++ LV K
Sbjct: 394 FISYRTLVDESCRKGKYDEATRLL-EMLREKQLVDRDSYDKLVNVLHK 440
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 107/262 (40%), Gaps = 46/262 (17%)
Query: 309 YNSLINAHCLQDQMQDAMKVYDSMIYKG---CLPSTVTYNTLI--------HGWCKIKKM 357
YNS+I ++ A+ ++ M+ C P+ TY+ L + + M
Sbjct: 210 YNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYM 269
Query: 358 DKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAII 417
+ SL +MV+ G+ PD+ N LV G+ + L + + +
Sbjct: 270 ETVRSLFRQMVDSGIEPDVFALNCLVKGYV---LSLHVNDALRIFHQ------------- 313
Query: 418 LDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGL 477
+ ++ C P + + Y ++ GLC+ GR +ARE S ++ KG
Sbjct: 314 MSVVYDCE--PNSFT----------------YDYLIHGLCAQGRTINARELLSEMKGKGF 355
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEK 537
+ +Y +V G +DDA + L +M E G + +Y V R+G + +
Sbjct: 356 VPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATR 415
Query: 538 YLQLMKGKGFSADATTTELLIN 559
L++++ K D + + L+N
Sbjct: 416 LLEMLREKQL-VDRDSYDKLVN 436
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 130 MFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC--NSYTHGAIINGLCKV 187
M G+EPD+ L +V G +V AL + +M + Y C NS+T+ +I+GLC
Sbjct: 279 MVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMS-VVYDCEPNSFTYDYLIHGLCAQ 337
Query: 188 GNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY 247
G T A +++G+GF + Y +++++ G +++A+ EM G D ++Y
Sbjct: 338 GRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISY 397
Query: 248 NCLTRGLFHCSRGK 261
L C +GK
Sbjct: 398 RTLVDE--SCRKGK 409
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 12/146 (8%)
Query: 429 EAVSLYREL-EKMNLDRHITI--YSIMLDGLCSYGR--------LKDAREFFSGLQAKGL 477
AV+++R + NL+ TI Y I+ L G ++ R F + G+
Sbjct: 225 RAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGI 284
Query: 478 KIDVFTYTIMVQGLCREGLLDDAEQLLMDMEE-KGCPPNDCTYNLFVQGLLRRGDISRSE 536
+ DVF +V+G ++DA ++ M C PN TY+ + GL +G +
Sbjct: 285 EPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINAR 344
Query: 537 KYLQLMKGKGFSADATTTELLINFFS 562
+ L MKGKGF + + L+N F+
Sbjct: 345 ELLSEMKGKGFVPNGKSYNSLVNAFA 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 82/204 (40%), Gaps = 20/204 (9%)
Query: 53 AVDFFNKMAAINPF---PNIKEFTVLI--------NLVVKMKHYTTAISLVKRMHSLGIE 101
AV+ F M P I+ + +L N + + T SL ++M GIE
Sbjct: 226 AVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIE 285
Query: 102 ADSFTFTIVINCLCRLSRTDLGFC-VLGLMFKMGL----EPDIVTLTTIVNGLCAEGNVE 156
D F +NCL + L L + +M + EP+ T +++GLCA+G
Sbjct: 286 PDVF----ALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTI 341
Query: 157 QALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIM 216
A L M G+ N ++ +++N G A+ ++ G D Y ++
Sbjct: 342 NARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLV 401
Query: 217 DSLCKDGLVNEALGLWSEMTGKGI 240
D C+ G +EA L + K +
Sbjct: 402 DESCRKGKYDEATRLLEMLREKQL 425
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/488 (20%), Positives = 190/488 (38%), Gaps = 102/488 (20%)
Query: 136 EPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGA---------------- 179
E ++VT TT+++G ++ L L MRM G + NS+T A
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 180 -------------------IINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
+IN K GN A F K E + V + +++
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS----VVTWNSMISGYA 271
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR-----------GLFHCSRGKVLKKGIMP 269
+GL EALG++ M ++ ++ + + HCS V+K G +
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCS---VVKYGFLF 328
Query: 270 DVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVY 329
D + +A++ Y K + A RL + VG NV ++ ++I+ D ++A+ ++
Sbjct: 329 DQNIRTALMVAYSKCTAMLDALRLFKEIGCVG---NVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 330 DSMIYKGCLPSTVTYN-------------------------------TLIHGWCKIKKMD 358
M KG P+ TY+ L+ + K+ K++
Sbjct: 386 SEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 359 KAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIIL 418
+A + + +K DI W+A++ G+ + G AA ++ + K G P+ T++ IL
Sbjct: 446 EAAKVFSGIDDK----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSIL 501
Query: 419 DGLFKCHFYPEAVSLYRELE----KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQA 474
+ C ++ ++ K LD + + S +L G ++ A E F +
Sbjct: 502 N---VCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE 558
Query: 475 KGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISR 534
K D+ ++ M+ G + G A + +M+++ + T+ G +
Sbjct: 559 K----DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEE 614
Query: 535 SEKYLQLM 542
EKY +M
Sbjct: 615 GEKYFDIM 622
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/416 (20%), Positives = 161/416 (38%), Gaps = 85/416 (20%)
Query: 197 FKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTR---- 252
F K GR D Y +++ +DG EA L+ + G++ D ++ + +
Sbjct: 50 FDKSPGR----DRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSAT 105
Query: 253 ---GLF----HCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPN 305
LF HC + +K G + DV +++VD Y K ++ M E N
Sbjct: 106 LCDELFGRQLHC---QCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK----ERN 158
Query: 306 VFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTL---------------IHG 350
V T+ +LI+ + + + ++ M +G P++ T+ +H
Sbjct: 159 VVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
Query: 351 WCKIKKMDKAMSLLGEMVN----------------KGLTPDICTWNALVGGFCKAGMPLA 394
+DK + + ++N K + TWN+++ G+ G+ L
Sbjct: 219 VVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLE 278
Query: 395 AKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRH----ITIYS 450
A + +M R+ Y + + F + L L+++ + Y
Sbjct: 279 ALGMFYSM--------RLNYVRLSESSF-----ASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 451 IMLDG------LCSYGR---LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAE 501
+ D + +Y + + DA F + G +V ++T M+ G + ++A
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVG---NVVSWTAMISGFLQNDGKEEAV 382
Query: 502 QLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELL 557
L +M+ KG PN+ TY++ + L IS SE + Q++K + T LL
Sbjct: 383 DLFSEMKRKGVRPNEFTYSVILTAL---PVISPSEVHAQVVKTNYERSSTVGTALL 435
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 111/247 (44%)
Query: 285 GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTY 344
G I RA ++ M G P+ ++N ++N + K++ S G
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 345 NTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQK 404
N LI G C+ ++ A+ LL E + P++ T++ L+ GFC G A +L+ M+K
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 405 HGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKD 464
PD IT+ I++ GL K E + L ++ + + Y +L GL R +
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 465 AREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQ 524
A+E S + + G++ +Y MV GLC + + + +L M G P + VQ
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQ 385
Query: 525 GLLRRGD 531
++ + +
Sbjct: 386 CVVSKNN 392
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 114/243 (46%), Gaps = 21/243 (8%)
Query: 212 YTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKV--------- 262
+ I++ L L +E ++ G++ D N L +GL C G +
Sbjct: 170 FNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGL--CESGNLEAALQLLDE 227
Query: 263 -LKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQ 321
++ P+V TFS ++ +C +G A +L+ M + +EP+ T+N LI+ + +
Sbjct: 228 FPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGR 287
Query: 322 MQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNA 381
+++ + + + M KGC P+ TY +++G K+ +A ++ +M++ G+ P ++
Sbjct: 288 VEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKK 347
Query: 382 LVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMN 441
+V G C+ + ++ M HG +P + + ++ +C VS + + N
Sbjct: 348 MVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV----QC-----VVSKNNDDSQAN 398
Query: 442 LDR 444
LDR
Sbjct: 399 LDR 401
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 99/262 (37%), Gaps = 27/262 (10%)
Query: 88 AISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVN 147
AI ++ M G S +F ++N L D + K+G+E D L ++
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 148 GLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKF 207
GLC GN+E AL L + R N T +I G C G A +++E +
Sbjct: 211 GLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEP 270
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGI 267
D + ++ L K G V E + L M KG +P+ TY + GL R
Sbjct: 271 DTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN------- 323
Query: 268 MPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMK 327
A+ +M M G+ P+ +Y ++ C + +
Sbjct: 324 --------------------LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDW 363
Query: 328 VYDSMIYKGCLPSTVTYNTLIH 349
V M+ G +P T+ + ++
Sbjct: 364 VLRQMVNHGFVPKTLMWWKVVQ 385
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 94/205 (45%)
Query: 50 VDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTI 109
++ A++ M +P+ K F ++NL+V K + + LG+E D+ I
Sbjct: 148 INRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
Query: 110 VINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMG 169
+I LC + +L + P+++T + ++ G C +G E+A L RM++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 170 YRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEAL 229
++ T +I+GL K G I ++++ +G + + Y ++ L EA
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAK 327
Query: 230 GLWSEMTGKGIQPDVVTYNCLTRGL 254
+ S+M G++P ++Y + GL
Sbjct: 328 EMMSQMISWGMRPSFLSYKKMVLGL 352
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 128/289 (44%), Gaps = 8/289 (2%)
Query: 264 KKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA-----RVGVEPNVFTYNSLINAHCL 318
+K P ++ +++ + + M E +M + R E F YN + L
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEE---FFYNLMRIYGNL 144
Query: 319 QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICT 378
++ A+++ M GC PS+ ++N +++ K D+ + G+ D C
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 379 WNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELE 438
N L+ G C++G AA +L+ + P+ +T++ ++ G + EA L +E
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 439 KMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLD 498
K ++ ++I++ GL GR+++ + ++ KG + + TY ++ GL +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 499 DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGF 547
+A++++ M G P+ +Y V GL + + L+ M GF
Sbjct: 325 EAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 8/207 (3%)
Query: 223 GLVNEALGLWSEMTGKGIQPDVVTYN-----CLTRGLF---HCSRGKVLKKGIMPDVHTF 274
G +N A+ + M G P ++N ++ LF H K G+ D
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCL 205
Query: 275 SAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIY 334
+ ++ C+ G + A +L+ + PNV T++ LI C + + ++A K+ + M
Sbjct: 206 NILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEK 265
Query: 335 KGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLA 394
+ P T+T+N LI G K ++++ + LL M KG P+ T+ ++ G L
Sbjct: 266 ERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLE 325
Query: 395 AKELISTMQKHGQLPDRITYAIILDGL 421
AKE++S M G P ++Y ++ GL
Sbjct: 326 AKEMMSQMISWGMRPSFLSYKKMVLGL 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%)
Query: 49 TVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFT 108
++AA+ ++ PN+ F+ LI + A L++RM IE D+ TF
Sbjct: 217 NLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFN 276
Query: 109 IVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEM 168
I+I+ L + R + G +L M G EP+ T ++ GL + +A + +M
Sbjct: 277 ILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISW 336
Query: 169 GYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGF 205
G R + ++ ++ GLC+ + +++ GF
Sbjct: 337 GMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGF 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Query: 402 MQKHGQLPDRITYAI-ILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYG 460
M+ +G L RI AI IL G+ +P + S ++ +L+ L S
Sbjct: 138 MRIYGNLAGRINRAIEILFGMPDFGCWPSSKS----------------FNFILNLLVSAK 181
Query: 461 RLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYN 520
+ + F G++ID I+++GLC G L+ A QLL + ++ PN T++
Sbjct: 182 LFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFS 241
Query: 521 LFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN 559
++G +G + K L+ M+ + D T +LI+
Sbjct: 242 PLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILIS 280
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 16/262 (6%)
Query: 273 TFSAIVDNYCKEGMI--------ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQD 324
+FS+ NY + ++ R + + MA +G E Y++L+NA + ++D
Sbjct: 11 SFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRD 70
Query: 325 AMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG 384
+V+ MI LP+T L+ + K ++ A +L EM K ++ +W A++
Sbjct: 71 GQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK----NVVSWTAMIS 126
Query: 385 GFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
+ + G A + + M + P+ T+A +L + ++ + K N D
Sbjct: 127 RYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDS 186
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
HI + S +LD G++K+ARE F L + DV + T ++ G + GL ++A ++
Sbjct: 187 HIFVGSSLLDMYAKAGQIKEAREIFECLPER----DVVSCTAIIAGYAQLGLDEEALEMF 242
Query: 505 MDMEEKGCPPNDCTYNLFVQGL 526
+ +G PN TY + L
Sbjct: 243 HRLHSEGMSPNYVTYASLLTAL 264
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/321 (20%), Positives = 130/321 (40%), Gaps = 42/321 (13%)
Query: 261 KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQD 320
KVL + +V +++A++ Y + G + A + M R +PN FT+ +++ + C++
Sbjct: 108 KVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS-CIRA 166
Query: 321 QMQDAMKVYDSMIYKGCLPSTV-TYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
K +I K S + ++L+ + K ++ +A + + + D+ +
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER----DVVSC 222
Query: 380 NALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL-----------FKCHFYP 428
A++ G+ + G+ A E+ + G P+ +TYA +L L CH
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
Query: 429 EAVSLYRELEKMNLD--------------------RHITIYSIMLDGLCSYGRLKDAREF 468
+ Y L+ +D R ++ ML G +G ++ E
Sbjct: 283 RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342
Query: 469 FSGLQ-AKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMD---MEEKGCPPNDCTYNLFVQ 524
F ++ K +K D T ++ G C G ++D + D E G P Y V
Sbjct: 343 FRLMRDEKRVKPDAVTLLAVLSG-CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVD 401
Query: 525 GLLRRGDISRSEKYLQLMKGK 545
L R G I + ++++ M K
Sbjct: 402 MLGRAGRIDEAFEFIKRMPSK 422
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 135/316 (42%), Gaps = 17/316 (5%)
Query: 65 PFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGF 124
P N+ +T +I+ + H + A+++ M + + FTF V+ R S LG
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 125 CVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGL 184
+ GL+ K + I +++++ G +++A + + E + + AII G
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER----DVVSCTAIIAGY 229
Query: 185 CKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDV 244
++G A+ F ++ G + Y +++ +L L++ + + +
Sbjct: 230 AQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYA 289
Query: 245 VTYNCLTRGLFHCSRGKVLKKGI--MPD--VHTFSAIVDNYCKEGM---IARAERLMGFM 297
V N L C ++ MP+ +++A++ Y K G+ + RLM
Sbjct: 290 VLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDE 349
Query: 298 ARVGVEPNVFTYNSLINAHCLQDQMQD-AMKVYDSMIYK--GCLPSTVTYNTLIHGWCKI 354
R V+P+ T ++++ C +M+D + ++D M+ G P T Y ++ +
Sbjct: 350 KR--VKPDAVTLLAVLSG-CSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRA 406
Query: 355 KKMDKAMSLLGEMVNK 370
++D+A + M +K
Sbjct: 407 GRIDEAFEFIKRMPSK 422
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 131/301 (43%), Gaps = 19/301 (6%)
Query: 141 TLTTIVNGLCAEGNVEQALGL-AMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKK 199
T + +V L A+ + + AL + + GY+ N + +I + ++
Sbjct: 74 TNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEE 133
Query: 200 VEGRGFKFDVPVYTAIMDSLC-KDGLVNEALGLWSEM-TGKGIQPDVVTYNCLTRG---- 253
V + VP+Y I+ C + L N A ++++M +PD+ TY L
Sbjct: 134 VIAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKR 193
Query: 254 ---------LFHCSRG---KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMARVG 301
H R ++ G++PD + I+ Y K + A R+ MA G
Sbjct: 194 FNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYG 253
Query: 302 VEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
EPN +TY+ L+ C + ++ + Y M KG +P+ Y LI +++D+A+
Sbjct: 254 SEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAV 313
Query: 362 SLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGL 421
++ +M+ L+PD+ T+N ++ C+ G A E++ +K + Y ++D +
Sbjct: 314 EVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEV 373
Query: 422 F 422
+
Sbjct: 374 Y 374
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 113/255 (44%), Gaps = 10/255 (3%)
Query: 301 GVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKM-DK 359
G + N Y+++I + + + +I C S YN +I C K + ++
Sbjct: 103 GYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKFLFNR 162
Query: 360 AMSLLGEMVNKGLT-PDICTWNALVGGFCKAGMPL--------AAKELISTMQKHGQLPD 410
A + +M+ + PD+ T+ L+ K L A + L M+ +G +PD
Sbjct: 163 AFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPD 222
Query: 411 RITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFS 470
+I+ KC EA+ +++E+ + + YS ++ G+C GR+ F+
Sbjct: 223 TFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYK 282
Query: 471 GLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRG 530
+Q KG+ + Y +++ L E LD+A +++ DM P+ TYN + L R G
Sbjct: 283 EMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGG 342
Query: 531 DISRSEKYLQLMKGK 545
S + + ++ K +
Sbjct: 343 RGSEALEMVEEWKKR 357
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 9/193 (4%)
Query: 51 DAAVDFFNKM-AAINPFPNIKEFTVLINLVVKMKH-------YTTAI-SLVKRMHSLGIE 101
+ A D +NKM + + P+++ +T+L++ ++K + Y A+ SL K+M S G+
Sbjct: 161 NRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVI 220
Query: 102 ADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGL 161
D+F ++I + D V M G EP+ T + +V G+C +G V Q LG
Sbjct: 221 PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGF 280
Query: 162 AMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCK 221
M G N + +I L A+ + D+ Y ++ LC+
Sbjct: 281 YKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCR 340
Query: 222 DGLVNEALGLWSE 234
G +EAL + E
Sbjct: 341 GGRGSEALEMVEE 353
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/314 (21%), Positives = 120/314 (38%), Gaps = 42/314 (13%)
Query: 175 YTHGAIINGLCKVGNTSAAIGYFK-KVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWS 233
+T+ ++ L + A+ F+ + RG+K + Y ++ N L
Sbjct: 73 FTNSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIE 132
Query: 234 EMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGI------------MPDVHTFSAIVDNY 281
E+ + V YNC+ R F C R + + PD+ T++ ++ +
Sbjct: 133 EVIAGACEMSVPLYNCIIR--FCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSL 190
Query: 282 CKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPST 341
K R +L NV Y L L QM+ G +P T
Sbjct: 191 LK-----RFNKL-----------NV-CYVYLHAVRSLTKQMKS----------NGVIPDT 223
Query: 342 VTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
N +I + K ++D+A+ + EM G P+ T++ LV G C+ G
Sbjct: 224 FVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKE 283
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
MQ G +P+ Y +++ L EAV + ++ +L + Y+ +L LC GR
Sbjct: 284 MQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGGR 343
Query: 462 LKDAREFFSGLQAK 475
+A E + +
Sbjct: 344 GSEALEMVEEWKKR 357
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/481 (21%), Positives = 184/481 (38%), Gaps = 68/481 (14%)
Query: 66 FPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCLCRLSRTDLGFC 125
FPN+ + KM + L ++ GI D+F+F +VI R G
Sbjct: 68 FPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GIL 122
Query: 126 VLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRCNSYTHGAIINGLC 185
L+ K+G D I++ +VE A + D++ R S +I+G
Sbjct: 123 FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKV---FDQISQRKGS-DWNVMISGYW 178
Query: 186 KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVV 245
K GN A F + DV +T ++ K + A + M K VV
Sbjct: 179 KWGNKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKS----VV 230
Query: 246 TYNCLTRGLFHCSRG----------KVLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMG 295
++N + G + G +L+ G+ P+ T+ ++ + L+
Sbjct: 231 SWNAMLSG--YAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVK 288
Query: 296 FMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIK 355
+ V N F +L++ H +Q A ++++ + G + VT+N +I G+ +I
Sbjct: 289 LIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIG 345
Query: 356 KMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHG-QLPDRITY 414
M A L M + ++ +WN+L+ G+ G A E M +G PD +T
Sbjct: 346 DMSSARQLFDTMPKR----NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTM 401
Query: 415 AIILDG--------LFKC---HFYPEAVSL----YRELEKM-----NL-----------D 443
+L L C + + L YR L M NL +
Sbjct: 402 ISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE 461
Query: 444 RHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQL 503
R + Y+ + + G + S ++ +G++ D TYT ++ R GLL + +++
Sbjct: 462 RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRI 521
Query: 504 L 504
Sbjct: 522 F 522
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 140/348 (40%), Gaps = 65/348 (18%)
Query: 208 DVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRG------LFHCSRGK 261
+V V ++ K + N+ L L+ + + GI PD ++ + + LF
Sbjct: 70 NVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQ---AL 126
Query: 262 VLKKGIMPDVHTFSAIVDNYCKEGMIARAERLMGFMA-RVGVEPNVFTYNSLINAHCLQD 320
V K G D + + I+D Y K + A ++ ++ R G + NV +I+ +
Sbjct: 127 VEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNV-----MISGYWKWG 181
Query: 321 QMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWN 380
++A K++D M V++ +I G+ K+K ++ A M K + +WN
Sbjct: 182 NKEEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMPEKS----VVSWN 233
Query: 381 ALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKM 440
A++ G+ + G A L + M + G P+ T+ I++ C F + SL R L K+
Sbjct: 234 AMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA---CSFRADP-SLTRSLVKL 289
Query: 441 NLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMV--QGLCREGLLD 498
+ K ++++ F T ++ CR+ +
Sbjct: 290 -------------------------------IDEKRVRLNCFVKTALLDMHAKCRD--IQ 316
Query: 499 DAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKG 546
A ++ E G N T+N + G R GD+S + + M +
Sbjct: 317 SARRIF---NELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRN 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 105/244 (43%), Gaps = 21/244 (8%)
Query: 304 PNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSL 363
PNVF NS+ D D +++Y+ G +P ++ +I K + L
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVI------KSAGRFGIL 122
Query: 364 LGEMVNK-GLTPDICTWNALVGGFCKAGMPLAAKELISTM-QKHGQLPDRITYAIILDGL 421
+V K G D N ++ + K +A+++ + Q+ G + +++ G
Sbjct: 123 FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGS-----DWNVMISGY 177
Query: 422 FKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDV 481
+K EA L+ M + + +++M+ G L++AR++F + K V
Sbjct: 178 WKWGNKEEACKLF----DMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKS----V 229
Query: 482 FTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQL 541
++ M+ G + G +DA +L DM G PN+ T+ + + R D S + ++L
Sbjct: 230 VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKL 289
Query: 542 MKGK 545
+ K
Sbjct: 290 IDEK 293
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/445 (21%), Positives = 191/445 (42%), Gaps = 51/445 (11%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLA 162
+ +TF +I +S LG + G+ K + D+ ++++ + G+++ A +
Sbjct: 130 NKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVF 189
Query: 163 MRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKD 222
+ E + + ++ING + G+ A+ FKK+E K
Sbjct: 190 TTIKEK----DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA--------------- 230
Query: 223 GLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDNYC 282
S +T G+ L G CS + + + ++ +A++D Y
Sbjct: 231 ----------SHVTMVGVLSACAKIRNLEFGRQVCSY--IEENRVNVNLTLANAMLDMYT 278
Query: 283 KEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTV 342
K G I A+RL M E + T+ ++++ + + + + A +V +SM K V
Sbjct: 279 KCGSIEDAKRLFDAME----EKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK----DIV 330
Query: 343 TYNTLIHGWCKIKKMDKAMSLLGEM-VNKGLTPDICTWNALVGGFCKAGMPLAAKELIST 401
+N LI + + K ++A+ + E+ + K + + T + + + G + + S
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSY 390
Query: 402 MQKHG-QLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNL--DRHITIYSIMLDGLCS 458
++KHG ++ +T A+I H Y + L + E N R + ++S M+ GL
Sbjct: 391 IKKHGIRMNFHVTSALI-------HMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAM 443
Query: 459 YGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK-GCPPNDC 517
+G +A + F +Q +K + T+T + GL+D+AE L ME G P +
Sbjct: 444 HGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEK 503
Query: 518 TYNLFVQGLLRRGDISRSEKYLQLM 542
Y V L R G + ++ K+++ M
Sbjct: 504 HYACIVDVLGRSGYLEKAVKFIEAM 528
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 115/536 (21%), Positives = 227/536 (42%), Gaps = 55/536 (10%)
Query: 56 FFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSLGIEADSFTFTIVINCL- 114
F + ++ +PN F LI ++ +++SL + +H + +++ + V N L
Sbjct: 118 FLDMVSESQCYPNKYTFPFLIKAAAEV----SSLSLGQSLHGMAVKSAVGSDVFVANSLI 173
Query: 115 -CRLSRTDL-GFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLAMRMDEMGYRC 172
C S DL C + K E D+V+ +++NG +G+ ++AL L +M+ +
Sbjct: 174 HCYFSCGDLDSACKVFTTIK---EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKA 230
Query: 173 NSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLW 232
+ T +++ K+ N +E ++ + A++D K G + +A L+
Sbjct: 231 SHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLF 290
Query: 233 SEMTGKGIQPDVVTYNCLTRGL-----FHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI 287
M K D VT+ + G + +R +VL D+ ++A++ Y + G
Sbjct: 291 DAMEEK----DNVTWTTMLDGYAISEDYEAAR-EVLNSMPQKDIVAWNALISAYEQNG-- 343
Query: 288 ARAERLMGFMA---RVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYK-GCLPSTVT 343
E L+ F + ++ N T S ++A C Q + + S I K G +
Sbjct: 344 KPNEALIVFHELQLQKNMKLNQITLVSTLSA-CAQVGALELGRWIHSYIKKHGIRMNFHV 402
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQ 403
+ LIH + K ++K+ E+ N D+ W+A++GG G A ++ MQ
Sbjct: 403 TSALIHMYSKCGDLEKSR----EVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQ 458
Query: 404 KHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK----MNLDRHITIYSIMLDGLCSY 459
+ P+ +T+ + EA SL+ ++E + ++H Y+ ++D L
Sbjct: 459 EANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKH---YACIVDVLGRS 515
Query: 460 GRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCR-EGLLDDAEQL---LMDMEEKGCPPN 515
G L+ A +F ++A + + ++ G C+ L+ AE L+++E P N
Sbjct: 516 GYLEKAVKF---IEAMPIPPSTSVWGALL-GACKIHANLNLAEMACTRLLELE----PRN 567
Query: 516 DCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLIN-----FFSGNKA 566
D + L + G + + M+ G + + + I+ F SG+ A
Sbjct: 568 DGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNA 623
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 92/240 (38%), Gaps = 36/240 (15%)
Query: 303 EPNVFTYNSLINAHCL-QDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAM 361
+PN F +N+LI A+ D + D + C P+ T+ LI ++ +
Sbjct: 92 KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQ 151
Query: 362 SLLGEMVNKGL-------------------------------TPDICTWNALVGGFCKAG 390
SL G V + D+ +WN+++ GF + G
Sbjct: 152 SLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKG 211
Query: 391 MPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYS 450
P A EL M+ +T +L K + +E+ ++ ++T+ +
Sbjct: 212 SPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLAN 271
Query: 451 IMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
MLD G ++DA+ F ++ K D T+T M+ G + A ++L M +K
Sbjct: 272 AMLDMYTKCGSIEDAKRLFDAMEEK----DNVTWTTMLDGYAISEDYEAAREVLNSMPQK 327
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 111/535 (20%), Positives = 201/535 (37%), Gaps = 112/535 (20%)
Query: 39 ELLSSMRDLKTVDAAVDFFNKMAAINPFPNIKEFTVLINLVVKMKHYTTAISLVKRMHSL 98
+LS++ + + + K+ P ++ + ++I + V+ Y AIS+ RM S
Sbjct: 50 HILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSE 109
Query: 99 GIE--ADSFTFTIVINCLCRLSRTDLGFCVLGLM-------------------------- 130
G++ D +T+ V L LG V G +
Sbjct: 110 GVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVE 169
Query: 131 -----FKMGLEPDIVTLTTIVNGLCAEGNVEQALGL-------AMRMD------------ 166
F + D+++ T+++G G + AL + ++ +D
Sbjct: 170 MARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCG 229
Query: 167 -----EMGYRCNSYTH-----------GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVP 210
EMG + A++N K G A F ++E R DV
Sbjct: 230 HLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR----DVI 285
Query: 211 VYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTY--------NCLTRGLFHCSRGKV 262
+T +++ +DG V AL L M +G++P+ VT + L C G
Sbjct: 286 TWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345
Query: 263 LKKGIMPDV-----------------------------HT--FSAIVDNYCKEGMIARAE 291
+++ + D+ HT +SAI+ + +++ A
Sbjct: 346 VRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDAL 405
Query: 292 RLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGW 351
L M R VEPN+ T NSL+ A+ ++ AM ++ + G + S L+H +
Sbjct: 406 GLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVY 465
Query: 352 CKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDR 411
K ++ A + + K + D+ W AL+ G+ G A ++ M + G P+
Sbjct: 466 SKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNE 525
Query: 412 ITYAIILDGLFKCHFYPEAVSLYR-ELEKMNLDRHITIYSIMLDGLCSYGRLKDA 465
IT+ L+ E ++L+R LE Y+ ++D L GRL +A
Sbjct: 526 ITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEA 580
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/430 (18%), Positives = 160/430 (37%), Gaps = 57/430 (13%)
Query: 178 GAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTG 237
G I++ L I Y +K+ + + Y ++ ++GL ++A+ ++ M
Sbjct: 49 GHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVS 108
Query: 238 KGIQ--PDVVTYNCLTRG--------LFHCSRGKVLKKGIMPDVHTFSAIVDNYCKEGMI 287
+G++ PD TY + + L G++L+ D + +A++ Y G +
Sbjct: 109 EGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKV 168
Query: 288 ARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGC---------- 337
A + M +V ++N++I+ + M DA+ ++D M+ +
Sbjct: 169 EMARDVFDVMK----NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSM 224
Query: 338 LP-------------------------STVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGL 372
LP N L++ + K +MD+A + M +
Sbjct: 225 LPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR-- 282
Query: 373 TPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVS 432
D+ TW ++ G+ + G A EL MQ G P+ +T A ++ +
Sbjct: 283 --DVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKC 340
Query: 433 LYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLC 492
L+ + + I I + ++ R+ FSG K ++ ++ G
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS----KYHTGPWSAIIAGCV 396
Query: 493 REGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSADAT 552
+ L+ DA L M + PN T N + D+ ++ + GF +
Sbjct: 397 QNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLD 456
Query: 553 TTELLINFFS 562
L++ +S
Sbjct: 457 AATGLVHVYS 466
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 112/250 (44%), Gaps = 43/250 (17%)
Query: 261 KVLKKGIMPDVHTFSAIVDNYCKE-GMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQ 319
K+L+ P + I+D G + +A L GV PN +YN L+ A CL
Sbjct: 144 KMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLN 203
Query: 320 DQMQDAMKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTW 379
D + A +++ M+ + +P +Y LI G+C+ +++ AM LL +M+NKG PD
Sbjct: 204 DDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD---- 259
Query: 380 NALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEK 439
L+GG C GM K+ + M G F P
Sbjct: 260 RTLIGGLCDQGMFDEGKKYLEEMISKG-------------------FSP----------- 289
Query: 440 MNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDD 499
H ++ + ++ G CS+G++++A + + G + T+ +++ +C E D+
Sbjct: 290 -----HFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNE---DE 341
Query: 500 AEQLLMDMEE 509
+E++ + +E+
Sbjct: 342 SEKIKLFLED 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 96/216 (44%), Gaps = 5/216 (2%)
Query: 344 YNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK-AGMPLAAKELISTM 402
+ LI + + K +K +S +M+ TP N ++ G A EL +
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 403 QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGRL 462
+ HG +P+ +Y +++ A L+ ++ + ++ + Y I++ G C G++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 463 KDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEKGCPPNDCTYNLF 522
A E + KG D ++ GLC +G+ D+ ++ L +M KG P+ N
Sbjct: 242 NGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCL 297
Query: 523 VQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLI 558
V+G G + + ++++ G + + T E++I
Sbjct: 298 VKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVI 333
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 7/191 (3%)
Query: 372 LTPDICTWNALVGGFCKAGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFY-PEA 430
LT +I T+ L+ + +A +P M + P ILD L Y +A
Sbjct: 117 LTGEIFTY--LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKA 174
Query: 431 VSLYRELEKMNLDRHITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQG 490
L++ + + Y++++ C L A + F + + + DV +Y I++QG
Sbjct: 175 FELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQG 234
Query: 491 LCREGLLDDAEQLLMDMEEKGCPPNDCTYNLFVQGLLRRGDISRSEKYLQLMKGKGFSAD 550
CR+G ++ A +LL DM KG P+ + GL +G +KYL+ M KGFS
Sbjct: 235 FCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 290
Query: 551 ATTTELLINFF 561
+ + L+ F
Sbjct: 291 FSVSNCLVKGF 301
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 102/275 (37%), Gaps = 40/275 (14%)
Query: 105 FTFTIVINCLCRLSRTDLGFCVLGLMFKM---GLEPDIVTLTTIVNGLCAE-GNVEQALG 160
FT+ I + +L VL +KM P L I++ L + G +++A
Sbjct: 122 FTYLIKVYAEAKLPEK-----VLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE 176
Query: 161 LAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
L G N+ ++ ++ C + S A F K+ R DV Y ++ C
Sbjct: 177 LFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFC 236
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIMPDVHTFSAIVDN 280
+ G VN A+ L +M KG PD ++
Sbjct: 237 RKGQVNGAMELLDDMLNKGFVPD-------------------------------RTLIGG 265
Query: 281 YCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPS 340
C +GM ++ + M G P+ N L+ C ++++A V + ++ G
Sbjct: 266 LCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLH 325
Query: 341 TVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPD 375
+ T+ +I C + +K L + V + +T D
Sbjct: 326 SDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 360
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 183/420 (43%), Gaps = 26/420 (6%)
Query: 103 DSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQALGLA 162
D +++ +I + + D + M ++ ++P+ VTLT+++ G CA G LG +
Sbjct: 365 DVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQG-CA-GVAASRLGKS 422
Query: 163 MRMDEMGYRCNSY--THGAIINGLCKVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLC 220
+ + S T A+I+ K G S A+ F+++ + D + A+
Sbjct: 423 IHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK----DAVAFNALAQGYT 478
Query: 221 KDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSR--------GKVLKKGIMPDVH 272
+ G N+A ++ M G+ PD T + + CS G+++K G + H
Sbjct: 479 QIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECH 538
Query: 273 TFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSM 332
A+++ + K +A A L + G E + ++N ++N + L Q ++A+ + M
Sbjct: 539 VAHALINMFTKCDALAAAIVLFD---KCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 333 IYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCKAGMP 392
+ P+ VT+ ++ ++ + MS+ ++ G N+LV + K GM
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMI 655
Query: 393 LAAKE-LISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSI 451
++++ I K+ + + A GL C AVSL+ +++ L +
Sbjct: 656 ESSEKCFIEISNKYIVSWNTMLSAYAAHGLASC-----AVSLFLSMQENELKPDSVSFLS 710
Query: 452 MLDGLCSYGRLKDAREFFSGL-QAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK 510
+L G +++ + F + + ++ +V Y MV L + GL +A +++ M K
Sbjct: 711 VLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVK 770
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 94/475 (19%), Positives = 187/475 (39%), Gaps = 32/475 (6%)
Query: 99 GIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVEQA 158
GI+ D ++FT + G + L+ +MGLE D+ T +V C ++ A
Sbjct: 95 GIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSA 154
Query: 159 LGLAMRMDEMGYRCNSYTHGAIINGLCKVGNTSAAIGYFKKVEGRGFKFD-------VPV 211
+ D+M + + T +++GL + G +SAA+ F + D +P
Sbjct: 155 RQV---FDKMHVK-DVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 212 YTAIMDS---LCKDGLVNEALGLWSEMTGKGIQPDVVTYNCLTRGLFHCSRGKVLKKGIM 268
+ + S C GLV + +++ +G ++ C L+ + V ++
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGFIFAFSSG------LIDMYCNCADLY--AAESVFEEVWR 262
Query: 269 PDVHTFSAIVDNYCKEGMIARAERLMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKV 328
D ++ ++ Y G L M V N S + A + + +
Sbjct: 263 KDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAI 322
Query: 329 YDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGGFCK 388
+D + +G + +L+ + K +++ A L + ++ D+ +W+A++ + +
Sbjct: 323 HDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDR----DVVSWSAMIASYEQ 378
Query: 389 AGMPLAAKELISTMQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITI 448
AG A L M + P+ +T +L G S++ K +++ +
Sbjct: 379 AGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELET 438
Query: 449 YSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDME 508
+ ++ GR A + F L K D + + QG + G + A + +M+
Sbjct: 439 ATAVISMYAKCGRFSPALKAFERLPIK----DAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Query: 509 EKGCPPNDCTYNLFVQGLLRRGDISR-SEKYLQLMKGKGFSADATTTELLINFFS 562
G P+ T +Q D +R S Y Q++K GF ++ LIN F+
Sbjct: 495 LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK-HGFDSECHVAHALINMFT 548
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 108/248 (43%), Gaps = 15/248 (6%)
Query: 326 MKVYDSMIYKGCLPSTVTYNTLIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVGG 385
++V+ S+I G P +N LI+ + ++ D + + + + P + WN+++ G
Sbjct: 22 LQVHGSLIVSGLKP----HNQLINAYSLFQRQDLSRVIFDSVRD----PGVVLWNSMIRG 73
Query: 386 FCKAGMPLAAKELISTM-QKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDR 444
+ +AG+ A M ++ G PD+ ++ L + + + ++ + +M L+
Sbjct: 74 YTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLES 133
Query: 445 HITIYSIMLDGLCSYGRLKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLL 504
+ I + +++ C L AR+ F + K DV T+ MV GL + G A L
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHVK----DVVTWNTMVSGLAQNGCSSAALLLF 189
Query: 505 MDMEEKGCPPNDCT-YNLF-VQGLLRRGDISRSEKYLQLMKGKGFSADATTTELLINFFS 562
DM + + YNL L + D+ R L + KG F+ + ++ N
Sbjct: 190 HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCAD 249
Query: 563 GNKADNTF 570
A++ F
Sbjct: 250 LYAAESVF 257
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 156/383 (40%), Gaps = 54/383 (14%)
Query: 206 KFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQPDVVTYNCL---TRGLFHCSRGK- 261
K D+ ++ + ++G E+L + EM G++ D L +R L GK
Sbjct: 79 KRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKM 138
Query: 262 ----VLKKGIMPDVHTFSAIVDNYCKEGMIARAER------------------------- 292
VLK D S+++D Y K G + A +
Sbjct: 139 IHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQ 198
Query: 293 ------LMGFMARVGVEPNVFTYNSLINAHCLQDQMQDAMKVYDSMIYKGCLPSTVTYNT 346
L+ M +G++P+V T+N+LI+ + ++ + M G P V++ +
Sbjct: 199 ADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTS 258
Query: 347 LIHGWCKIKKMDKAMSLLGEMVNKGLTPDICTWNALVG-----GFCKAGMPLAAKELIST 401
+I G + +KA +M+ GL P+ T L+ + K G + +++
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG 318
Query: 402 MQKHGQLPDRITYAIILDGLFKCHFYPEAVSLYRELEKMNLDRHITIYSIMLDGLCSYGR 461
++ HG + +LD KC F EA+ L+R+ K + ++ M+ ++G
Sbjct: 319 LEDHG-----FVRSALLDMYGKCGFISEAMILFRKTPK----KTTVTFNSMIFCYANHGL 369
Query: 462 LKDAREFFSGLQAKGLKIDVFTYTIMVQGLCREGLLDDAEQLLMDMEEK-GCPPNDCTYN 520
A E F ++A G K+D T+T ++ GL D + L + M+ K P Y
Sbjct: 370 ADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYA 429
Query: 521 LFVQGLLRRGDISRSEKYLQLMK 543
V L R G + + + ++ M+
Sbjct: 430 CMVDLLGRAGKLVEAYEMIKAMR 452
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 130/323 (40%), Gaps = 60/323 (18%)
Query: 46 DLKTVDAAVDFFNKMAAI----NPFPNIKE-----FTVLINLVVKMKHYTTAISLVKRMH 96
D V + +D ++K + F ++ E F +I+ A++LVK M
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK 210
Query: 97 SLGIEADSFTFTIVINCLCRLSRTDLGFCVLGLMFKMGLEPDIVTLTTIVNGLCAEGNVE 156
LGI+ D T+ +I+ + + +L LM G +PD+V+ T+I++GL E
Sbjct: 211 LLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNE 270
Query: 157 QALGLAMRMDEMGYRCNSYT---------------HGAIINGLC---------------- 185
+A +M G NS T HG I+G
Sbjct: 271 KAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL 330
Query: 186 ----KVGNTSAAIGYFKKVEGRGFKFDVPVYTAIMDSLCKDGLVNEALGLWSEMTGKGIQ 241
K G S A+ F+K K + +++ GL ++A+ L+ +M G +
Sbjct: 331 DMYGKCGFISEAMILFRKTP----KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEK 386
Query: 242 PDVVTYN-----CLTRGLFHCSRGKVL----KKGIMPDVHTFSAIVDNYCKEGMIARAER 292
D +T+ C GL + L K I+P + ++ +VD + G + A
Sbjct: 387 LDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYE 446
Query: 293 LMGFMARVGVEPNVFTYNSLINA 315
++ M +EP++F + +L+ A
Sbjct: 447 MIKAMR---MEPDLFVWGALLAA 466