Miyakogusa Predicted Gene

Lj0g3v0261749.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0261749.1 Non Chatacterized Hit- tr|K3Y6I6|K3Y6I6_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si009827,40.44,2e-19,AA_permease_2,NULL; AMINO ACID
PERMEASE-RELATED,NULL; AMINO ACID TRANSPORTER,Amino acid/polyamine
tr,gene.g20344.t1.1
         (145 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G01170.2 | Symbols: BAT1 | bidirectional amino acid transport...   157   2e-39
AT2G01170.1 | Symbols: BAT1 | bidirectional amino acid transport...   157   2e-39

>AT2G01170.2 | Symbols: BAT1 | bidirectional amino acid transporter
           1 | chr2:102364-104157 REVERSE LENGTH=437
          Length = 437

 Score =  157 bits (398), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/117 (65%), Positives = 90/117 (76%)

Query: 1   MILIPSVATERASVKFVFTYFNTDNGDGINSRCYIFLLGLLMSQYTLTGYDASAHMTEET 60
           MILIP V+TERA+ KFVFT FNTDNG GI S  YIF+LGLLMSQYT+TGYDASAHMTEET
Sbjct: 127 MILIPLVSTERATTKFVFTNFNTDNGLGITSYAYIFVLGLLMSQYTITGYDASAHMTEET 186

Query: 61  KDAERNGPKXXXXXXXXXXXXXWCYILGISFAVTDIPGLLSDDNEAGGYAIAVRYFI 117
            DA++NGP+             W YILGIS+AVTDIP LLS+ N +GGYAIA  +++
Sbjct: 187 VDADKNGPRGIISAIGISILFGWGYILGISYAVTDIPSLLSETNNSGGYAIAEIFYL 243


>AT2G01170.1 | Symbols: BAT1 | bidirectional amino acid transporter
           1 | chr2:102364-104462 REVERSE LENGTH=516
          Length = 516

 Score =  157 bits (397), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 77/117 (65%), Positives = 90/117 (76%)

Query: 1   MILIPSVATERASVKFVFTYFNTDNGDGINSRCYIFLLGLLMSQYTLTGYDASAHMTEET 60
           MILIP V+TERA+ KFVFT FNTDNG GI S  YIF+LGLLMSQYT+TGYDASAHMTEET
Sbjct: 206 MILIPLVSTERATTKFVFTNFNTDNGLGITSYAYIFVLGLLMSQYTITGYDASAHMTEET 265

Query: 61  KDAERNGPKXXXXXXXXXXXXXWCYILGISFAVTDIPGLLSDDNEAGGYAIAVRYFI 117
            DA++NGP+             W YILGIS+AVTDIP LLS+ N +GGYAIA  +++
Sbjct: 266 VDADKNGPRGIISAIGISILFGWGYILGISYAVTDIPSLLSETNNSGGYAIAEIFYL 322