Miyakogusa Predicted Gene

Lj0g3v0260439.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0260439.2 tr|C1MQ59|C1MQ59_MICPC Glycosyltransferase family
77 protein (Fragment) OS=Micromonas pusilla
(strai,35.26,2e-17,UNCHARACTERIZED,NULL; RETICULON,Reticulon;
Nucleotide-diphospho-sugar transferases,NULL; Nucleotid_t,CUFF.17175.2
         (330 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19360.1 | Symbols:  | Nucleotide-diphospho-sugar transferase...   513   e-146
AT1G75110.1 | Symbols: RRA2 | Nucleotide-diphospho-sugar transfe...   497   e-141
AT1G75120.1 | Symbols: RRA1 | Nucleotide-diphospho-sugar transfe...   432   e-121
AT2G35610.1 | Symbols: XEG113 | xyloglucanase 113 | chr2:1494761...    72   4e-13
AT1G70630.1 | Symbols:  | Nucleotide-diphospho-sugar transferase...    69   5e-12

>AT1G19360.1 | Symbols:  | Nucleotide-diphospho-sugar transferase
           family protein | chr1:6690672-6692211 REVERSE LENGTH=428
          Length = 428

 Score =  513 bits (1322), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 242/322 (75%), Positives = 275/322 (85%), Gaps = 1/322 (0%)

Query: 3   SSACESPEQLDALKLDIESAKEKNSELKKKVRGLMEKLRMAEQGEGHAQEQVIVLGENHK 62
           SSACESPE++  LK D  +  EKN+ELKK+VR L EKLR+AEQG  +A++QV+ LG   K
Sbjct: 60  SSACESPERVKMLKSDFVTLSEKNAELKKQVRELTEKLRLAEQGSDNARKQVLALGTQIK 119

Query: 63  AGPYGTVKGLRTNPPVIPDESVNPRLGKLLEEVAIYKELLVVLANTNVMEMLEVWFTNIK 122
           AGP+GTVK LRTNP ++PDES+NPRL K+LEE+A+ KE++V LAN NV  MLEV   +IK
Sbjct: 120 AGPFGTVKSLRTNPTILPDESINPRLAKILEEIAVDKEVIVALANANVKAMLEVQIASIK 179

Query: 123 RVGIPNYLVVALDDKIEEFCKANDVPVYRRDPDQGVDSVAKTGGNHAVSGLKFRILREFL 182
           RVGI NYLVVALDD IE  CK NDV  Y+RDPD+ VD+V KTGGNHAVSGLKFR+LREFL
Sbjct: 180 RVGITNYLVVALDDYIENLCKENDVAYYKRDPDKDVDTVGKTGGNHAVSGLKFRVLREFL 239

Query: 183 QLGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHDNRTAYGFNDVFDEPSMGWARYAH 242
           QLGY VLLSDVDIV+LQNPF +LYRDSDVESMSDGHDN TAYGFNDVFDEP+MGWARYAH
Sbjct: 240 QLGYGVLLSDVDIVFLQNPFSHLYRDSDVESMSDGHDNHTAYGFNDVFDEPAMGWARYAH 299

Query: 243 TMRIWVYNSGFFYIRPTLPSIELLDRVASRLSTDSKAWDQAVFNEELFFPSHPGYDGLHA 302
           TMRIWV+NSGFFY+RPT+PSIELLDRVA RLS  +K WDQAVFNEELF+PSHP Y  LHA
Sbjct: 300 TMRIWVFNSGFFYLRPTIPSIELLDRVADRLSK-AKVWDQAVFNEELFYPSHPEYTALHA 358

Query: 303 AKRTMDMYLFMNSKVLFKTVRK 324
           +KR MDMY FMNSKVLFKTVRK
Sbjct: 359 SKRVMDMYEFMNSKVLFKTVRK 380


>AT1G75110.1 | Symbols: RRA2 | Nucleotide-diphospho-sugar
           transferase family protein | chr1:28194348-28195885
           REVERSE LENGTH=428
          Length = 428

 Score =  497 bits (1279), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 233/321 (72%), Positives = 276/321 (85%), Gaps = 1/321 (0%)

Query: 4   SACESPEQLDALKLDIESAKEKNSELKKKVRGLMEKLRMAEQGEGHAQEQVIVLGENHKA 63
           ++CES E++  LK D      KN+EL+K+VR L EK+R+AEQ   +A++QV+VLG   KA
Sbjct: 62  ASCESSERVKMLKSDFSIISVKNAELRKQVRELTEKVRLAEQETENARKQVLVLGSEIKA 121

Query: 64  GPYGTVKGLRTNPPVIPDESVNPRLGKLLEEVAIYKELLVVLANTNVMEMLEVWFTNIKR 123
           GP+GTVK LRTNP V+PDESVNPRL KLLE+VA+ KE++VVLAN+NV  MLE+   ++KR
Sbjct: 122 GPFGTVKSLRTNPTVVPDESVNPRLAKLLEKVAVNKEIIVVLANSNVKPMLELQIASVKR 181

Query: 124 VGIPNYLVVALDDKIEEFCKANDVPVYRRDPDQGVDSVAKTGGNHAVSGLKFRILREFLQ 183
           VGI NYL+VALDD +E FC++ +V  Y+RDPD+ VD V K+GGNHAVSGLKFR+LREFLQ
Sbjct: 182 VGIQNYLIVALDDSMESFCESKEVVFYKRDPDKAVDMVGKSGGNHAVSGLKFRVLREFLQ 241

Query: 184 LGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHDNRTAYGFNDVFDEPSMGWARYAHT 243
           LGYSVLLSDVDIV+LQNPF +L+RDSDVESMSDGHDN TAYGFNDVFDEPSMGWARYAHT
Sbjct: 242 LGYSVLLSDVDIVFLQNPFSHLHRDSDVESMSDGHDNNTAYGFNDVFDEPSMGWARYAHT 301

Query: 244 MRIWVYNSGFFYIRPTLPSIELLDRVASRLSTDSKAWDQAVFNEELFFPSHPGYDGLHAA 303
           MRIWV+NSGFFY+RPT+PSI+LLDRVA  LS  S+AWDQAVFNE+LF+PSHPGY GLHA+
Sbjct: 302 MRIWVFNSGFFYLRPTIPSIDLLDRVADTLSK-SEAWDQAVFNEQLFYPSHPGYTGLHAS 360

Query: 304 KRTMDMYLFMNSKVLFKTVRK 324
           KR MDMY FMNSKVLFKTVRK
Sbjct: 361 KRVMDMYEFMNSKVLFKTVRK 381


>AT1G75120.1 | Symbols: RRA1 | Nucleotide-diphospho-sugar
           transferase family protein | chr1:28197022-28198656
           REVERSE LENGTH=402
          Length = 402

 Score =  432 bits (1111), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 212/324 (65%), Positives = 252/324 (77%), Gaps = 13/324 (4%)

Query: 1   MVSSACESPEQLDALKLDIESAKEKNSELKKKVRGLMEKLRMAEQGEGHAQEQVIVLGEN 60
           + S++CESPE++   K +     EKN EL+K+V  L EK+R+AEQ E      VI     
Sbjct: 46  VASASCESPERVKMFKAEFAIISEKNGELRKQVSDLTEKVRLAEQKE------VI----- 94

Query: 61  HKAGPYGTVKGLRTNPPVIPDESVNPRLGKLLEEVAIYKELLVVLANTNVMEMLEVWFTN 120
            KAGP+GTV GL+TNP V PDES NPRL KLLE+VA+ KE++VVLAN NV  MLEV   +
Sbjct: 95  -KAGPFGTVTGLQTNPTVAPDESANPRLAKLLEKVAVNKEIIVVLANNNVKPMLEVQIAS 153

Query: 121 IKRVGIPNYLVVALDDKIEEFCKANDVPVYRRDPDQGVDSVAKTGGNHAVSGLKFRILRE 180
           +KRVGI NYLVV LDD +E FCK+N+V  Y+RDPD  +D V K+  +  VSGLKFR+LRE
Sbjct: 154 VKRVGIQNYLVVPLDDSLESFCKSNEVAYYKRDPDNAIDVVGKSRRSSDVSGLKFRVLRE 213

Query: 181 FLQLGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHDNRTAYGFNDVFDEPSMGWARY 240
           FLQLGY VLLSDVDIV+LQNPF +LYRDSDVESMSDGHDN TAYGFNDVFD+P+M  +R 
Sbjct: 214 FLQLGYGVLLSDVDIVFLQNPFGHLYRDSDVESMSDGHDNNTAYGFNDVFDDPTMTRSRT 273

Query: 241 AHTMRIWVYNSGFFYIRPTLPSIELLDRVASRLSTDSKAWDQAVFNEELFFPSHPGYDGL 300
            +T RIWV+NSGFFY+RPTLPSIELLDRV   LS  S  WDQAVFN+ LF+PSHPGY GL
Sbjct: 274 VYTNRIWVFNSGFFYLRPTLPSIELLDRVTDTLSK-SGGWDQAVFNQHLFYPSHPGYTGL 332

Query: 301 HAAKRTMDMYLFMNSKVLFKTVRK 324
           +A+KR MD+Y FMNS+VLFKTVRK
Sbjct: 333 YASKRVMDVYEFMNSRVLFKTVRK 356


>AT2G35610.1 | Symbols: XEG113 | xyloglucanase 113 |
           chr2:14947617-14951106 REVERSE LENGTH=644
          Length = 644

 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 88/207 (42%), Gaps = 14/207 (6%)

Query: 101 LLVVLANTNVMEMLEVWFTNIKRVGIPNYLVVALDDKIEEFCKANDVPVYRRDPDQG-VD 159
           ++V   N   M+ +  W  ++  + + N LV A+D K+ E      VPV+        VD
Sbjct: 134 IIVTFGNYAFMDFILTWVKHLTDLDLSNILVGAMDTKLLEALYWKGVPVFDMGSHMSTVD 193

Query: 160 SVAKTGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHD 219
               +   H +   K  ++   L  GY +L+ D D+V+L+NP  YL R  D + ++   D
Sbjct: 194 VGWGSPTFHKMGREKVILIDSVLPFGYELLMCDTDMVWLKNPMPYLARFPDADVLTSS-D 252

Query: 220 NRTAYGFNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTLPSIELLDRVASRLSTDSKA 279
                  +D  D     W +         YN G F+ RPT  + +L       L  D K 
Sbjct: 253 QVVPTVIDDSLDI----WQQVGAA-----YNIGIFHWRPTESAKKLAKEWKEILLADDKV 303

Query: 280 WDQAVFNEEL---FFPSHPGYDGLHAA 303
           WDQ  FNE +     PS  G  GL  A
Sbjct: 304 WDQNGFNEIVRRQLGPSVEGDSGLFYA 330


>AT1G70630.1 | Symbols:  | Nucleotide-diphospho-sugar transferase
           family protein | chr1:26632118-26633991 FORWARD
           LENGTH=537
          Length = 537

 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 33/211 (15%)

Query: 78  VIPDESVNP-----RLGKLLEEVAIYKELLVV-LANTNVMEMLEVWFTNIKRVGIPNYLV 131
           V  DE+V P      L  LL  VA     +V+ +A  +  +ML  W   ++R+ +PN+LV
Sbjct: 246 VQKDETVPPLKFPFDLESLLPLVADKNRTVVLSVAGYSYKDMLMSWVCRLRRLKVPNFLV 305

Query: 132 VALDDKIEEFCKANDVPVYRRDPDQGV-----DSVAKTGGNHAVSGLKFRILREFLQLGY 186
            ALDD+  +F     +PV+  DP         D    +     V+ +K R + + L+LGY
Sbjct: 306 CALDDETYQFSILQGLPVF-FDPYAPKNISFNDCHFGSKCFQRVTKVKSRTVLKILKLGY 364

Query: 187 SVLLSDVDIVYLQNPFDYL--YRDSDVESMSDGHDNRTAYGFNDVFDEPSMGWARYAHTM 244
           +VLLSDVD+ + +NP   L  +  S + + SD ++                     A   
Sbjct: 365 NVLLSDVDVYWFRNPLPLLQSFGPSVLAAQSDEYNTT-------------------APIN 405

Query: 245 RIWVYNSGFFYIRPTLPSIELLDRVASRLST 275
           R    NSGF++ R   P+I  +++V    +T
Sbjct: 406 RPRRLNSGFYFARSDSPTIAAMEKVVKHAAT 436