Miyakogusa Predicted Gene

Lj0g3v0259769.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259769.1 Non Chatacterized Hit- tr|I1JQE0|I1JQE0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,38.51,0.000000000000001,TRAF domain-like,TRAF-like; ZF_TRAF,Zinc
finger, TRAF-type; TNF RECEPTOR ASSOCIATED FACTOR,NULL;
seg,CUFF.17115.1
         (408 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G11950.2 | Symbols:  | TRAF-like superfamily protein | chr3:3...   446   e-125
AT3G11950.1 | Symbols:  | TRAF-like superfamily protein | chr3:3...   446   e-125

>AT3G11950.2 | Symbols:  | TRAF-like superfamily protein |
           chr3:3783273-3785098 REVERSE LENGTH=572
          Length = 572

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 199/329 (60%), Positives = 259/329 (78%), Gaps = 3/329 (0%)

Query: 19  EKIKDEKEGGPMIHCDLCDTEVIHKMAQMFVPGLASACVDNTTGDPFKTPGSVVNDLRKD 78
           E I+D+KEGGP  HCDL DT+V+HK+AQ+F+PGLA+ACVDNTTGD F++PGSV  D+RK+
Sbjct: 9   ESIEDQKEGGPSFHCDLYDTQVVHKIAQVFLPGLATACVDNTTGDIFRSPGSVAADIRKE 68

Query: 79  MIDYLTQRSESFVAESVILEGTGPDDEVSDHPFDIVSYFVDDFVDSKRNLFSKVSGWLLS 138
           MI+YLT+RSE+FVAE ++L+G G + E S  PFDI+S F+DDF  SKRNLFS+VSGW+LS
Sbjct: 69  MIEYLTRRSETFVAEHIVLQG-GSEIEASHDPFDIISDFIDDFATSKRNLFSRVSGWMLS 127

Query: 139 DKREDKIDDFVQEIEMNGFWSLDRRETIAETLLKNVDFKNLFHCSMKFNSAEDLAKHTEK 198
           ++RED IDDF QE+E++GFW  D RE IA+TLLKNVDFK+  HC MKF +  +LA+H   
Sbjct: 128 ERREDNIDDFAQEMEISGFWLTDHREGIAQTLLKNVDFKSSAHCEMKFQTEGELAEHAMN 187

Query: 199 CNFKPMICQNEGCNNRFSTRHLKEHDSTCPFKIIPCEQKCTDSLMRRQMDRHCITECPMK 258
           C ++ M C+NEGC   F    ++ HDS CPFKIIPCEQ C++S+MRR MDRHCIT CPMK
Sbjct: 188 CGYRTMNCENEGCTAVFCANQMENHDSVCPFKIIPCEQNCSESIMRRDMDRHCITVCPMK 247

Query: 259 LVNCPFYSVGCRSAISQCMIEKHCADDLHSHLLHILKGIHREASGEDLKRRVEQIVQAXX 318
           LVNCPF+SVGC S + QC +++H  D++ SHL++IL+ I++EAS +DLK R EQI Q   
Sbjct: 248 LVNCPFHSVGCLSDVHQCEVQQHHLDNVSSHLMYILRSIYKEASLDDLKPRAEQIQQ--L 305

Query: 319 XXXLAEAKEVRSLKNIVKALEAKLGPLEV 347
              L+EA+  RSL N+VK ++ KLGPLE+
Sbjct: 306 STRLSEARNARSLTNLVKEIDGKLGPLEI 334


>AT3G11950.1 | Symbols:  | TRAF-like superfamily protein |
           chr3:3783273-3785098 REVERSE LENGTH=572
          Length = 572

 Score =  446 bits (1146), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 199/329 (60%), Positives = 259/329 (78%), Gaps = 3/329 (0%)

Query: 19  EKIKDEKEGGPMIHCDLCDTEVIHKMAQMFVPGLASACVDNTTGDPFKTPGSVVNDLRKD 78
           E I+D+KEGGP  HCDL DT+V+HK+AQ+F+PGLA+ACVDNTTGD F++PGSV  D+RK+
Sbjct: 9   ESIEDQKEGGPSFHCDLYDTQVVHKIAQVFLPGLATACVDNTTGDIFRSPGSVAADIRKE 68

Query: 79  MIDYLTQRSESFVAESVILEGTGPDDEVSDHPFDIVSYFVDDFVDSKRNLFSKVSGWLLS 138
           MI+YLT+RSE+FVAE ++L+G G + E S  PFDI+S F+DDF  SKRNLFS+VSGW+LS
Sbjct: 69  MIEYLTRRSETFVAEHIVLQG-GSEIEASHDPFDIISDFIDDFATSKRNLFSRVSGWMLS 127

Query: 139 DKREDKIDDFVQEIEMNGFWSLDRRETIAETLLKNVDFKNLFHCSMKFNSAEDLAKHTEK 198
           ++RED IDDF QE+E++GFW  D RE IA+TLLKNVDFK+  HC MKF +  +LA+H   
Sbjct: 128 ERREDNIDDFAQEMEISGFWLTDHREGIAQTLLKNVDFKSSAHCEMKFQTEGELAEHAMN 187

Query: 199 CNFKPMICQNEGCNNRFSTRHLKEHDSTCPFKIIPCEQKCTDSLMRRQMDRHCITECPMK 258
           C ++ M C+NEGC   F    ++ HDS CPFKIIPCEQ C++S+MRR MDRHCIT CPMK
Sbjct: 188 CGYRTMNCENEGCTAVFCANQMENHDSVCPFKIIPCEQNCSESIMRRDMDRHCITVCPMK 247

Query: 259 LVNCPFYSVGCRSAISQCMIEKHCADDLHSHLLHILKGIHREASGEDLKRRVEQIVQAXX 318
           LVNCPF+SVGC S + QC +++H  D++ SHL++IL+ I++EAS +DLK R EQI Q   
Sbjct: 248 LVNCPFHSVGCLSDVHQCEVQQHHLDNVSSHLMYILRSIYKEASLDDLKPRAEQIQQ--L 305

Query: 319 XXXLAEAKEVRSLKNIVKALEAKLGPLEV 347
              L+EA+  RSL N+VK ++ KLGPLE+
Sbjct: 306 STRLSEARNARSLTNLVKEIDGKLGPLEI 334