Miyakogusa Predicted Gene
- Lj0g3v0259639.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0259639.1 Non Chatacterized Hit- tr|B4FW77|B4FW77_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,26.59,2e-18,PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.17102.1
(454 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 327 8e-90
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 3e-89
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 317 8e-87
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 2e-86
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 7e-71
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 258 6e-69
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 1e-68
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 2e-68
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 3e-67
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 4e-63
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 235 4e-62
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 231 1e-60
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 230 2e-60
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 6e-58
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 1e-57
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 220 2e-57
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 219 4e-57
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 217 2e-56
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 215 4e-56
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 214 7e-56
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 5e-55
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 211 6e-55
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 211 7e-55
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 211 7e-55
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 5e-54
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 6e-54
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 9e-54
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 207 1e-53
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 206 2e-53
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 203 3e-52
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 202 6e-52
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 8e-52
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 8e-52
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 199 2e-51
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 199 5e-51
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 8e-51
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 1e-50
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 3e-50
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 196 4e-50
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 6e-50
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 7e-50
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 194 8e-50
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 194 1e-49
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 1e-49
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 2e-49
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 2e-49
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 3e-49
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 192 5e-49
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 191 6e-49
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 7e-49
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 7e-49
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 191 8e-49
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 190 1e-48
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 2e-48
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 4e-48
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 189 4e-48
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 188 8e-48
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 6e-47
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 9e-47
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 184 1e-46
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 184 1e-46
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 1e-46
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 184 2e-46
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 4e-46
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 4e-46
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 6e-46
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 181 1e-45
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 181 1e-45
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 179 4e-45
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 4e-45
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 4e-45
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 5e-45
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 6e-45
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 7e-45
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 178 7e-45
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 4e-44
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 176 4e-44
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 4e-44
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 173 2e-43
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 172 4e-43
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 172 6e-43
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 1e-42
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 1e-42
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 1e-42
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 2e-42
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 169 4e-42
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 6e-42
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 7e-42
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 7e-42
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 9e-42
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 166 2e-41
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 2e-41
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 164 1e-40
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 7e-40
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 7e-40
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 159 5e-39
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 5e-39
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 5e-39
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 9e-39
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 3e-38
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 3e-38
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 4e-38
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 2e-37
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 3e-37
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 1e-36
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 1e-35
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 1e-35
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 3e-35
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 144 1e-34
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 144 2e-34
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 4e-34
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 1e-33
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 1e-33
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 140 2e-33
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 8e-33
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 7e-32
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 1e-31
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 2e-31
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 133 2e-31
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 2e-31
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 3e-30
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 8e-30
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 127 1e-29
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 126 3e-29
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 1e-28
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 2e-28
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 2e-28
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 4e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 122 5e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 122 6e-28
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 8e-28
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 121 1e-27
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 120 3e-27
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 119 3e-27
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 119 5e-27
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 7e-26
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 3e-25
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 110 3e-24
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 3e-24
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 107 2e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 107 2e-23
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 107 2e-23
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 106 4e-23
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 8e-23
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 103 2e-22
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 103 3e-22
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 4e-22
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 102 6e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 2e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 100 2e-21
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 100 2e-21
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 9e-21
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 1e-19
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 94 3e-19
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 90 3e-18
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 7e-18
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 9e-18
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 86 5e-17
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 8e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 1e-16
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 80 3e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 8e-15
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 78 1e-14
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 77 2e-14
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 5e-14
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 76 6e-14
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 75 1e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 74 2e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 74 2e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 74 3e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 4e-13
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 6e-13
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 70 2e-12
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 4e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 64 3e-10
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 62 1e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 59 5e-09
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 59 5e-09
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 56 5e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 54 2e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 53 5e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 53 6e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 51 2e-06
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 327 bits (839), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 168/449 (37%), Positives = 258/449 (57%), Gaps = 34/449 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+ N+ I + R N+ AR++F+ MP +DV +WN+ML+ Y +G +R++FD MP
Sbjct: 125 DLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMP 184
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAF-------------------------------NYFAA 124
KN VSWNA+++ VQN ++EA +F +
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDS 244
Query: 125 MPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
M R+ S+N +I+G+ + G++ +A++LF E P +V ++T M+ GY++ + + AR
Sbjct: 245 MNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM---VEEAR 301
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDE 244
LFD MP RNEVSW M+ G V+ E A ELF MP +NV MITG+ + GK+ E
Sbjct: 302 ELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISE 361
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A LF ++ RD SW MI GY+Q+G EAL LF QM R G + + F S + CA
Sbjct: 362 AKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCAD 421
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
+ L+ G+Q + ++K G+++ V NAL+ MY KCGSI ++ F + + DIVSWNT+
Sbjct: 422 VVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTM 481
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
IA +++H A +F+ M G++PD T +++LS C G +D+ F M DYG
Sbjct: 482 IAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYG 541
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ P S+HYAC+VD++ RAG L+ A +++
Sbjct: 542 VMPNSQHYACMVDLLGRAGLLEDAHNLMK 570
Score = 238 bits (606), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 209/398 (52%), Gaps = 44/398 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N + F + I ARQ FD M +DVV+WN+++T Y SG +R LFD P+++V
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVF 282
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
+W AMV+G +QN M++EA F MPERN S+NAM++G+++ R+ A+ LF MPC N
Sbjct: 283 TWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGR 220
V ++ MI GY + G I+ A+ LFD MP+R+ VSW MI G ++G EA LF +
Sbjct: 343 VSTWNTMITGYAQC---GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQ 399
Query: 221 MPQK-----------------NVVA----------------------STAMITGFCKQGK 241
M ++ +VVA A++ +CK G
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
++EA LF+++ +DI SWN MI GY+++G GE AL F M R G++PDD V++ +A
Sbjct: 460 IEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 302 CASLALLDQGRQT-YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-LAFGQTSQPDIV 359
C+ L+D+GRQ Y + +G + +V + + G + D+ L +PD
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAA 579
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
W T++ A H A + D++ A+ G+ L
Sbjct: 580 IWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVL 617
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 188/367 (51%), Gaps = 30/367 (8%)
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
K D+ WN +++Y +G + +F MP + VS+N M++G ++N + A
Sbjct: 58 KCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKL 117
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
F MPER+ S+N MI G+++ L A+ LF+ MP +V S+ M+ GY + G +
Sbjct: 118 FDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYA---QNGCVD 174
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
AR++FD MP +N+VSW +++ V+N EEA LF +V+ ++ GF K+ K
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKK 234
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ-----------MVRTGMQP 290
+ EA F + RD+ SWN +ITGYAQ+G+ +EA LF + MV +Q
Sbjct: 235 IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQN 294
Query: 291 ----------DDLIFVSLFTACASLALLDQGRQTYALVIKHGFD----SDLSVNNALVTM 336
D + + + A LA QG + + K FD ++S N ++T
Sbjct: 295 RMVEEARELFDKMPERNEVSWNAMLAGYVQGERME--MAKELFDVMPCRNVSTWNTMITG 352
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y++CG I +++ F + + D VSW +IA ++Q ++A F QM G R + +F
Sbjct: 353 YAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 397 LSLLSVC 403
S LS C
Sbjct: 413 SSALSTC 419
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 325 bits (834), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 162/413 (39%), Positives = 252/413 (61%), Gaps = 7/413 (1%)
Query: 44 IAAFSRAGNITAARQVFDKMPT-KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSW 102
I + + G++ AR++FD++ + K+VVTW +M++ Y S + LF MP +NVVSW
Sbjct: 84 ITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSW 143
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVV 162
N M+ G Q+ +D+A F MPERN S+N+M+ ++ GR+ +A LF+ MP +VV
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP 222
S+T M+DG K G + AR LFD MP RN +SW MI G +N +EA +LF MP
Sbjct: 204 SWTAMVDGLAK---NGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMP 260
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+++ + MITGF + ++++A LF ++ +++ SW MITGY +N EEALN+FS+
Sbjct: 261 ERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSK 320
Query: 283 MVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
M+R G ++P+ +VS+ +AC+ LA L +G+Q + L+ K + V +AL+ MYSK G
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
Query: 342 SIVDSELAF--GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
++ + F G Q D++SWN++IA +A H +A ++QM G +P +T+L+L
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNL 440
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
L C AG +++ M F +V D +P R EHY CLVD+ RAG+L+ I
Sbjct: 441 LFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFI 493
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 187/351 (53%), Gaps = 52/351 (14%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N I ++++G I A ++FD+MP +++V+WNSM+ A G + LF+ MP ++VV
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVV 203
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
SW AMV G +N +DEA F MPERN S+NAMI+G+ + R+ +A +LF+ MP +
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGR 220
S+ MI G+++ +E + +A LFD MP +N +SWT MI G VEN EEA +F +
Sbjct: 264 FASWNTMITGFIRNRE---MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSK 320
Query: 221 M----------------------------------------PQKNVVASTAMITGFCKQG 240
M QKN + ++A++ + K G
Sbjct: 321 MLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
Query: 241 KVDEAWTLFQQ-IRC-RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
++ A +F + C RD+ SWN MI YA +G G+EA+ +++QM + G +P + +++L
Sbjct: 381 ELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNL 440
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNA----LVTMYSKCGSIVD 345
AC+ L+++G + + +++ D L + LV + + G + D
Sbjct: 441 LFACSHAGLVEKGMEFFKDLVR---DESLPLREEHYTCLVDLCGRAGRLKD 488
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 171/320 (53%), Gaps = 16/320 (5%)
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM-PRRN 194
+I K G++ +A++LF +P +VV++T +I GY+K+ G + AR LFD + R+N
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKL---GDMREARELFDRVDSRKN 108
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
V+WT M++G + + A LF MP++NVV+ MI G+ + G++D+A LF ++
Sbjct: 109 VVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPE 168
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
R+I SWN M+ Q GR +EA+NLF +M R D + + ++ A +D+ R+
Sbjct: 169 RNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRL 224
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ + + S NA++T Y++ I +++ F + D SWNT+I F ++
Sbjct: 225 FDCMPERNIIS----WNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREM 280
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
KA FD+M V I++ ++++ + +E++N+F+ M+ D + P Y
Sbjct: 281 NKACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVS 336
Query: 435 LVDVMSRAGQLQRACEIIRL 454
++ S L +I +L
Sbjct: 337 ILSACSDLAGLVEGQQIHQL 356
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 317 bits (813), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 170/473 (35%), Positives = 263/473 (55%), Gaps = 60/473 (12%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
AN+ I SR G I AR++FD +K + +WNSM+ Y+ + P+ +R LFD MP +N+
Sbjct: 20 ANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNI 79
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
+SWN +V+G ++N +DEA F MPERN S+ A++ G++ G++ A+ LF +MP
Sbjct: 80 ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEK 139
Query: 160 NVVSYTVMIDG-------------YVKVKEGGGIAR------------------------ 182
N VS+TVM+ G Y + + IAR
Sbjct: 140 NKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMS 199
Query: 183 ----------------------ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGR 220
AR +FD MP + EVSWT M+ G V+NG E+A ELF
Sbjct: 200 ERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEV 259
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
MP K V+A AMI+G ++G++ +A +F ++ R+ ASW +I + +NG EAL+LF
Sbjct: 260 MPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF 319
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
M + G++P +S+ + CASLA L G+Q +A +++ FD D+ V + L+TMY KC
Sbjct: 320 ILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKC 379
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGITFLSL 399
G +V S+L F + DI+ WN+II+ +A H L +A F +M G +P+ +TF++
Sbjct: 380 GELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
LS C AG ++E + ++ M +G+ P + HYAC+VD++ RAG+ A E+I
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMI 492
Score = 198 bits (503), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 184/335 (54%), Gaps = 13/335 (3%)
Query: 70 TWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN 129
T N +T G +R LFD+ K++ SWN+MVAG N M +A F MP+RN
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRN 78
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDA 189
S+N ++SG++K G + +A+++F MP NVVS+T ++ GYV G + A +LF
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYV---HNGKVDVAESLFWK 135
Query: 190 MPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLF 249
MP +N+VSWTVM+ G +++G ++A +L+ +P K+ +A T+MI G CK+G+VDEA +F
Sbjct: 136 MPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIF 195
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
++ R + +W M+TGY QN R ++A +F M + ++ + S+ ++
Sbjct: 196 DEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSMLMGYVQNGRIE 251
Query: 310 QGRQTYALV-IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+ + ++ +K + NA+++ + G I + F + + SW T+I
Sbjct: 252 DAEELFEVMPVK-----PVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH 306
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
++ +A F M GVRP T +S+LSVC
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVC 341
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 203/418 (48%), Gaps = 46/418 (11%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ F + G I A ++++ +P KD + SM+ G +R +FD M ++V++W
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWT 207
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS 163
MV G QN+ +D+A F MPE+ S+ +M+ G+++ GR+ DA+ LF+ MP V++
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIA 267
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ 223
MI G + + G IA+AR +FD+M RN+ SW +I NG EA +LF M +
Sbjct: 268 CNAMISG---LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 224 K---------------------------------------NVVASTAMITGFCKQGKVDE 244
+ +V ++ ++T + K G++ +
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACA 303
+ +F + +DI WN +I+GYA +G GEEAL +F +M +G +P+++ FV+ +AC+
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 304 SLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSW 361
++++G + Y ++ G + +V M + G ++ E+ T +PD W
Sbjct: 445 YAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVW 504
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+++ A H A ++I + G T++ L ++ G+ + L LM
Sbjct: 505 GSLLGACRTHSQLDVAEFCAKKLIEIEPENSG-TYILLSNMYASQGRWADVAELRKLM 561
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 15/207 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DVY A++ + + + G + ++ +FD+ P+KD++ WNS+++ Y G + + +F MP
Sbjct: 365 DVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMP 424
Query: 96 MK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGR 145
+ N V++ A ++ C M++E + +M + A Y M+ + GR
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGR 484
Query: 146 LCDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMI 202
+A + M P+ + ++ G + +A A+ L + P N ++ ++
Sbjct: 485 FNEAMEMIDSMTVEPDAAVWGSLL-GACRTHSQLDVAEFCAKKLIEIEP-ENSGTYILLS 542
Query: 203 NGLVENGLYEEAWELFGRMPQKNVVAS 229
N G + + EL M + V S
Sbjct: 543 NMYASQGRWADVAELRKLMKTRLVRKS 569
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 117/291 (40%), Gaps = 55/291 (18%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
V N I+ + G I AR+VFD M ++ +W +++ + +GF + LF M
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 97 KNV----VSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCD 148
+ V + ++++ C L A + + + + +++ +IK G L
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
++ +F P ++ + W +I+G +
Sbjct: 385 SKLIFDRFPSKDI----------------------------------IMWNSIISGYASH 410
Query: 209 GLYEEAWELFGRMP-----QKNVVASTAMITGFCKQGKVDEAWTLFQQIR----CRDI-A 258
GL EEA ++F MP + N V A ++ G V+E +++ + + I A
Sbjct: 411 GLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITA 470
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
+ M+ + GR EA+ + M ++PD ++ SL AC + + LD
Sbjct: 471 HYACMVDMLGRAGRFNEAMEMIDSMT---VEPDAAVWGSLLGACRTHSQLD 518
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/489 (34%), Positives = 261/489 (53%), Gaps = 65/489 (13%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
L+ + + + + I+ SR G I AR+ FD + K + +WNS+++ Y+ +G P+
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA---------------------- 123
+R LFD M +NVVSWN +V+G ++N M+ EA N F
Sbjct: 66 EARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGM 125
Query: 124 ---------AMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP--------------- 159
MPERN S+ M G I GR+ A++L+ MP
Sbjct: 126 VGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCRE 185
Query: 160 ----------------NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
NVV++T MI GY ++ + AR LF+ MP + EVSWT M+
Sbjct: 186 GRVDEARLIFDEMRERNVVTWTTMITGY---RQNNRVDVARKLFEVMPEKTEVSWTSMLL 242
Query: 204 GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
G +G E+A E F MP K V+A AMI GF + G++ +A +F + RD A+W M
Sbjct: 243 GYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGM 302
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I Y + G EAL+LF+QM + G++P +S+ + CA+LA L GRQ +A +++ F
Sbjct: 303 IKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQF 362
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
D D+ V + L+TMY KCG +V ++L F + S DI+ WN+II+ +A H L +A F +
Sbjct: 363 DDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHE 422
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
M + G P+ +T +++L+ C AGK++E + +F M + + P EHY+C VD++ RAG
Sbjct: 423 MPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAG 482
Query: 444 QLQRACEII 452
Q+ +A E+I
Sbjct: 483 QVDKAMELI 491
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 175/362 (48%), Gaps = 44/362 (12%)
Query: 51 GNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCV 110
G I AR+++D MP KDVV +M+ G +R +FD M +NVV+W M+ G
Sbjct: 155 GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 111 QNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDG 170
QN+ +D A F MPE+ S+ +M+ G+ GR+ DA+ F+ MP V++ MI G
Sbjct: 215 QNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------ 224
+ +V G I++AR +FD M R+ +W MI G EA +LF +M ++
Sbjct: 275 FGEV---GEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSF 331
Query: 225 ---------------------------------NVVASTAMITGFCKQGKVDEAWTLFQQ 251
+V ++ ++T + K G++ +A +F +
Sbjct: 332 PSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR 391
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+DI WN +I+GYA +G GEEAL +F +M +G P+ + +++ TAC+ L++G
Sbjct: 392 FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEG 451
Query: 312 RQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFA 369
+ + ++ K + + V M + G + + EL T +PD W ++ A
Sbjct: 452 LEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACK 511
Query: 370 QH 371
H
Sbjct: 512 TH 513
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 265 bits (676), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 136/366 (37%), Positives = 213/366 (58%), Gaps = 5/366 (1%)
Query: 90 LFDAMPMKNVVSWNAMVAGCVQN-DMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCD 148
+F M KN ++WN+++ G ++ + EA F +PE + SYN M+S +++
Sbjct: 83 VFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEK 142
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
AQ F MP + S+ MI GY + G + +AR LF +M +NEVSW MI+G +E
Sbjct: 143 AQSFFDRMPFKDAASWNTMITGYAR---RGEMEKARELFYSMMEKNEVSWNAMISGYIEC 199
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC-RDIASWNIMITGY 267
G E+A F P + VVA TAMITG+ K KV+ A +F+ + +++ +WN MI+GY
Sbjct: 200 GDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGY 259
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+N R E+ L LF M+ G++P+ S C+ L+ L GRQ + +V K +D+
Sbjct: 260 VENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDV 319
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
+ +L++MY KCG + D+ F + D+V+WN +I+ +AQH KA F +MI
Sbjct: 320 TALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDN 379
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
+RPD ITF+++L C AG ++ M F MV DY + P+ +HY C+VD++ RAG+L+
Sbjct: 380 KIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEE 439
Query: 448 ACEIIR 453
A ++IR
Sbjct: 440 ALKLIR 445
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 185/358 (51%), Gaps = 45/358 (12%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDML 115
A Q+FD++P D ++N ML+ Y + + +++ FD MP K+ SWN M+ G + +
Sbjct: 112 AHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEM 171
Query: 116 DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK 175
++A F +M E+N S+NAMISG+I+ G L A FK P VV++T MI GY+K K
Sbjct: 172 EKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAK 231
Query: 176 EGGGIARARALFDAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRMPQK---------- 224
+ + A A+F M +N V+W MI+G VEN E+ +LF M ++
Sbjct: 232 K---VELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLS 288
Query: 225 -----------------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
+V A T++I+ +CK G++ +AW LF+ ++ +
Sbjct: 289 SALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK 348
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
D+ +WN MI+GYAQ+G ++AL LF +M+ ++PD + FV++ AC L++ G +
Sbjct: 349 DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYF 408
Query: 316 -ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
++V + + +V + + G + ++ +L +P + T++ A H
Sbjct: 409 ESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVH 466
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 123/324 (37%), Gaps = 81/324 (25%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM-KNV 99
N I+ + G++ A F P + VV W +M+T Y + + + A+F M + KN+
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNL 249
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPER------------------------------- 128
V+WNAM++G V+N ++ F AM E
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 129 --------NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK------- 173
+ + ++IS + K G L DA +LF+ M +VV++ MI GY +
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKA 369
Query: 174 -------------------------VKEGGGIARARALFDAMPRRNEVS-----WTVMIN 203
G + A F++M R +V +T M++
Sbjct: 370 LCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVD 429
Query: 204 GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDE----AWTLFQQIRCRDIAS 259
L G EEA +L MP + A + G C+ K E A Q+ ++ A
Sbjct: 430 LLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAG 489
Query: 260 WNIMITGYAQNGRGEEALNLFSQM 283
+ + YA R E+ + +M
Sbjct: 490 YVQLANIYASKNRWEDVARVRKRM 513
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 264 bits (675), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 249/502 (49%), Gaps = 82/502 (16%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +++ N I A+S+ G++ RQVFDKMP +++ TWNS++T GF + +LF +
Sbjct: 52 SNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRS 111
Query: 94 MPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASY---------------- 133
MP ++ +WN+MV+G Q+D +EA YFA M + N S+
Sbjct: 112 MPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG 171
Query: 134 -------------------NAMISGFIKFGRLCDAQRLFKEMPCPNVVS----------- 163
+A++ + K G + DAQR+F EM NVVS
Sbjct: 172 VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQN 231
Query: 164 ---------YTVMIDGYVKVKEG--GGIARARALFDAMPRRNEVSWTVMINGLVENGLY- 211
+ +M++ V+ E + A A A+ EV V+ N + N +
Sbjct: 232 GPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIIL 291
Query: 212 --------------EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
+EA +F MP +NV+A T+MI+G+ A +F ++ R++
Sbjct: 292 SNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNV 351
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWN +I GY QNG EEAL+LF + R + P F ++ ACA LA L G Q +
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 318 VIKHGF------DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
V+KHGF + D+ V N+L+ MY KCG + + L F + + D VSWN +I FAQ+
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
+A F +M+ G +PD IT + +LS C AG ++E + F+ M D+G+ P +H
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 432 YACLVDVMSRAGQLQRACEIIR 453
Y C+VD++ RAG L+ A +I
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIE 553
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 199/447 (44%), Gaps = 82/447 (18%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DVY + + +S+ GN+ A++VFD+M ++VV+WNS++T + +G + +F M
Sbjct: 186 DVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMML 245
Query: 96 MKNV----VSWNAMVAGC----------------VQNDMLDEAFNYFAAMPERNAASYNA 135
V V+ ++++ C V+ND L + NA
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKL-----------RNDIILSNA 294
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
+ + K R+ +A+ +F MP NV++ T MI GY AR +F M RN
Sbjct: 295 FVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAM---AASTKAARLMFTKMAERNV 351
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS-------------------------- 229
VSW +I G +NG EEA LF + +++V +
Sbjct: 352 VSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 230 -------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQN 270
++I + K G V+E + +F+++ RD SWN MI G+AQN
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQN 471
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH-GFDSDLSV 329
G G EAL LF +M+ +G +PD + + + +AC +++GR ++ + + G
Sbjct: 472 GYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDH 531
Query: 330 NNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
+V + + G + +++ + QPD V W +++AA H + ++++ V
Sbjct: 532 YTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEVE 591
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNL 415
G ++ L ++ GK ++ MN+
Sbjct: 592 PSNSG-PYVLLSNMYAELGKWEDVMNV 617
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 124/307 (40%), Gaps = 63/307 (20%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV--- 100
I+ ++ A + AAR +F KM ++VV+WN+++ Y +G + + +LF + ++V
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386
Query: 101 -SWNAMVAGC--------------------------------VQNDMLD---------EA 118
S+ ++ C V N ++D E
Sbjct: 387 YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 119 FNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-PCPNVVSYTVMIDGYVKVKEG 177
+ F M ER+ S+NAMI GF + G +A LF+EM + MI
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
Query: 178 GGIARARALFDAMPRRNEVS-----WTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM 232
G + R F +M R V+ +T M++ L G EEA + MP +
Sbjct: 507 GFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGS 566
Query: 233 ITGFCKQGKVDEAWTLFQ-------QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
+ C KV TL + ++ + + ++ YA+ G+ E+ +N+ M +
Sbjct: 567 LLAAC---KVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRK 623
Query: 286 TGM--QP 290
G+ QP
Sbjct: 624 EGVTKQP 630
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 258 bits (659), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 157/473 (33%), Positives = 242/473 (51%), Gaps = 60/473 (12%)
Query: 36 DVYRANLNIAAFSRAGNI---TAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
DV N I+ + G I AR++FD+MP++D +WN+M++ Y + + LF+
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA--- 149
MP +N VSW+AM+ G QN +D A F MP ++++ A+++G IK RL +A
Sbjct: 161 KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV 220
Query: 150 --------------------------QR--------LFKEMP---------------CPN 160
QR LF ++P C N
Sbjct: 221 LGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKN 280
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGR 220
VVS+ MI Y+KV G + AR LFD M R+ +SW MI+G V E+A+ LF
Sbjct: 281 VVSWNSMIKAYLKV---GDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSE 337
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
MP ++ + M++G+ G V+ A F++ + SWN +I Y +N +EA++LF
Sbjct: 338 MPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLF 397
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
+M G +PD SL +A L L G Q + +V+K D+ V+NAL+TMYS+C
Sbjct: 398 IRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI-PDVPVHNALITMYSRC 456
Query: 341 GSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
G I++S F + + ++++WN +I +A H +A + F M + G+ P ITF+S+
Sbjct: 457 GEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSV 516
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
L+ C AG +DE+ F M+ Y I P+ EHY+ LV+V S GQ + A II
Sbjct: 517 LNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYII 569
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 217/439 (49%), Gaps = 38/439 (8%)
Query: 38 YRA-NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
+RA N + R+G I AR +F+K+ ++ VTWN+M++ Y +R LFD MP
Sbjct: 40 FRATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPK 99
Query: 97 KNVVSWNAMVAG---CVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
++VV+WN M++G C L+EA F MP R++ S+N MISG+ K R+ +A LF
Sbjct: 100 RDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLF 159
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENG-LYE 212
++MP N VS++ MI G+ + G + A LF MP ++ ++ GL++N L E
Sbjct: 160 EKMPERNAVSWSAMITGFC---QNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSE 216
Query: 213 EAWEL--FGRM---PQKNVVASTAMITGFCKQGKVDEAWTLFQQIR-------------- 253
AW L +G + + V A +I G+ ++G+V+ A LF QI
Sbjct: 217 AAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRER 276
Query: 254 -CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
C+++ SWN MI Y + G A LF QM D +S T + +
Sbjct: 277 FCKNVVSWNSMIKAYLKVGDVVSARLLFDQM-------KDRDTISWNTMIDGYVHVSRME 329
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
+AL + + D N +V+ Y+ G++ + F +T + VSWN+IIAA+ ++
Sbjct: 330 DAFALFSEMP-NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
Y +A F +M G +PD T SLLS + M + ++V IP H
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV-IPDVPVHN 447
Query: 433 ACLVDVMSRAGQLQRACEI 451
A L+ + SR G++ + I
Sbjct: 448 A-LITMYSRCGEIMESRRI 465
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 257 bits (656), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/461 (33%), Positives = 243/461 (52%), Gaps = 44/461 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V N + R G++ A+QVFD MP++DVV+WN+M+ Y + + ++ LF M
Sbjct: 168 NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS 227
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
KNVV+W +MV G + + EA+ F MPERN S+ AMISGF +A LF E
Sbjct: 228 EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLE 287
Query: 156 MP------CPN-----VVSYT------------------VMIDGYVKVKEGGGIARARA- 185
M PN ++Y V+ +G+ V G +A++
Sbjct: 288 MKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVH 347
Query: 186 -------LFDAMPRRNEV----SWTVMINGLVENGLYEEAWELFGRMPQ-KNVVASTAMI 233
+ A NE S ++IN ++NG E A LF R+ + V+ T+MI
Sbjct: 348 MYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMI 407
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
G+ + G V A+ LFQ++ +D +W +MI+G QN EA +L S MVR G++P +
Sbjct: 408 DGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNS 467
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHG--FDSDLSVNNALVTMYSKCGSIVDSELAFG 351
+ L ++ + + LDQG+ + ++ K +D DL + N+LV+MY+KCG+I D+ F
Sbjct: 468 TYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFA 527
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ Q D VSWN++I + H L KA + F +M+ G +P+ +TFL +LS C +G I
Sbjct: 528 KMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITR 587
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+ LF M Y I P +HY ++D++ RAG+L+ A E I
Sbjct: 588 GLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFI 628
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 134/383 (34%), Positives = 214/383 (55%), Gaps = 21/383 (5%)
Query: 51 GNITAARQVFDKMPTKD----VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
G + AR + DK+P + VV W S+L+ Y +G+ +R LF+ MP +N+V+ NAM+
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
G V+ ++EA+ F MP +N S+ M++ GR DA LF EMP NVVS+
Sbjct: 116 TGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNT 174
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
++ G ++ G + +A+ +FDAMP R+ VSW MI G +EN EEA LFG M +KNV
Sbjct: 175 LVTGLIR---NGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNV 231
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR- 285
V T+M+ G+C+ G V EA+ LF ++ R+I SW MI+G+A N EAL LF +M +
Sbjct: 232 VTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKD 291
Query: 286 -TGMQPDDLIFVSLFTACASLALLDQ--GRQTYALVIKHGF---DSDLSVNNALVTMYSK 339
+ P+ +SL AC L + + G Q +A VI +G+ D D + +LV MY+
Sbjct: 292 VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYAS 351
Query: 340 CGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
G I ++ ++ D+ S N II + ++ +A + F+++ ++ D +++ S+
Sbjct: 352 SGLIASAQSLLNESF--DLQSCNIIINRYLKNGDLERAETLFERVKSL---HDKVSWTSM 406
Query: 400 LSVCCRAGKIDESMNLFNLMVHD 422
+ AG + + LF +HD
Sbjct: 407 IDGYLEAGDVSRAFGLFQ-KLHD 428
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 14/177 (7%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFSSYD--VYRANLNIAAFSRAGNITAARQVFD 61
S+++S A + +H H V AK + YD + N ++ +++ G I A ++F
Sbjct: 470 SVLLSSAGATSNLDQGKHIH--CVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFA 527
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALF----DAMPMKNVVSWNAMVAGCVQNDMLDE 117
KM KD V+WNSM+ H G + LF D+ N V++ +++ C + ++
Sbjct: 528 KMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITR 587
Query: 118 AFNYFAAMPERNAAS-----YNAMISGFIKFGRLCDAQRLFKEMP-CPNVVSYTVMI 168
F AM E + Y +MI + G+L +A+ +P P+ Y ++
Sbjct: 588 GLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALL 644
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 256 bits (655), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 140/418 (33%), Positives = 232/418 (55%), Gaps = 12/418 (2%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
I ++R+ + A +FD+MP +DVV+WNSM++ G + LFD MP ++VVSW
Sbjct: 73 ITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVVSWT 132
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS 163
AMV GC ++ +D+A F MP ++ A++N+M+ G+++FG++ DA +LFK+MP NV+S
Sbjct: 133 AMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVIS 192
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVSWTVMINGLVENGLYEEAWELFG 219
+T MI G + + G A LF M R +T +I + ++ G
Sbjct: 193 WTTMICGLDQNERSG---EALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHG 249
Query: 220 RMPQKNVV----ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEE 275
+ + + S ++IT + ++ ++ +F + +A W +++GY+ N + E+
Sbjct: 250 LIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHED 309
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
AL++FS M+R + P+ F S +C++L LD G++ + + +K G ++D V N+LV
Sbjct: 310 ALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVV 369
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MYS G++ D+ F + + IVSWN+II AQH A F QMI + PD IT
Sbjct: 370 MYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEIT 429
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMVHDYG-IPPRSEHYACLVDVMSRAGQLQRACEII 452
F LLS C G +++ LF M I + +HY C+VD++ R G+L+ A E+I
Sbjct: 430 FTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELI 487
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 162/296 (54%), Gaps = 3/296 (1%)
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV 174
+DEA F +P + + Y MI+G+ + RL DA LF EMP +VVS+ MI G V
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCV-- 108
Query: 175 KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMIT 234
E G + A LFD MP R+ VSWT M+NG +G ++A LF +MP K+ A +M+
Sbjct: 109 -ECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVH 167
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
G+ + GKVD+A LF+Q+ +++ SW MI G QN R EAL+LF M+R ++
Sbjct: 168 GYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP 227
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
F + TACA+ G Q + L+IK GF + V+ +L+T Y+ C I DS F +
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
+ W +++ ++ + + A S F M+ + P+ TF S L+ C G +D
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLD 343
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/504 (25%), Positives = 226/504 (44%), Gaps = 121/504 (24%)
Query: 53 ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQN 112
I AR+VF+++P+ V + M+T Y S + LFD MP+++VVSWN+M++GCV+
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVEC 110
Query: 113 DMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV 172
++ A F MPER+ S+ AM++G + G++ A+RLF +MP + ++ M+ GY+
Sbjct: 111 GDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYL 170
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM----------P 222
+ G + A LF MP +N +SWT MI GL +N EA +LF M P
Sbjct: 171 QF---GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRP 227
Query: 223 QKNVVA-----------------------------STAMITGFCKQGKVDEAWTLFQQIR 253
V+ S ++IT + ++ ++ +F +
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
+A W +++GY+ N + E+AL++FS M+R + P+ F S +C++L LD G++
Sbjct: 288 HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE 347
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-------------------------- 347
+ + +K G ++D V N+LV MYS G++ D+
Sbjct: 348 MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGR 407
Query: 348 -----LAFGQ----TSQPDIVSWNTIIAAFAQHVLYYKARSYF----------------- 381
+ FGQ +PD +++ +++A + K R F
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHY 467
Query: 382 ----------------DQMIA-VGVRPDGITFLSLLSVCCRAGKIDESMN----LFNLMV 420
+++I + V+P+ + +L+LLS C +D +FNL
Sbjct: 468 TCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNL-- 525
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQ 444
S Y L ++ + AG+
Sbjct: 526 ----DSKSSAAYVLLSNIYASAGR 545
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 88/208 (42%), Gaps = 33/208 (15%)
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLI----- 294
++DEA +F Q+ ++ + MITGY ++ R +ALNLF +M VR + + +I
Sbjct: 50 RIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVE 109
Query: 295 ---------------------FVSLFTACASLALLDQG-RQTYALVIKHGFDSDLSVNNA 332
+ ++ C +DQ R Y + +K D + N+
Sbjct: 110 CGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVK-----DTAAWNS 164
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
+V Y + G + D+ F Q +++SW T+I Q+ +A F M+ ++
Sbjct: 165 MVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKST 224
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMV 420
F +++ C A + + L++
Sbjct: 225 SRPFTCVITACANAPAFHMGIQVHGLII 252
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 229/426 (53%), Gaps = 12/426 (2%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D +N+ ++ + RAG A +VF M K+VV+ +SM+ Y G +R+LFD M
Sbjct: 176 DSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMT 235
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNA--------MISGFIKFGRLC 147
+NV++W AM+ G + ++ F F M + N+ F+++
Sbjct: 236 ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGS 295
Query: 148 DAQRLFKEMPCP-NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
L MP ++ ++ Y K+ G + A+A+F M ++ VSW +I GLV
Sbjct: 296 QIHGLVSRMPLEFDLFLGNSLMSMYSKL---GYMGEAKAVFGVMKNKDSVSWNSLITGLV 352
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
+ EA+ELF +MP K++V+ T MI GF +G++ + LF + +D +W MI+
Sbjct: 353 QRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISA 412
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+ NG EEAL F +M++ + P+ F S+ +A ASLA L +G Q + V+K +D
Sbjct: 413 FVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVND 472
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
LSV N+LV+MY KCG+ D+ F S+P+IVS+NT+I+ ++ + KA F + +
Sbjct: 473 LSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLES 532
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
G P+G+TFL+LLS C G +D F M Y I P +HYAC+VD++ R+G L
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLD 592
Query: 447 RACEII 452
A +I
Sbjct: 593 DASNLI 598
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/396 (30%), Positives = 202/396 (51%), Gaps = 22/396 (5%)
Query: 37 VYRANL-----NIAAFSRAGNITAARQVFDKMPTKDVVTW--NSMLTAYWHSGFPQHSRA 89
+YR N+ + A S IT + F + T + NS ++ + +G Q + A
Sbjct: 12 IYRHNICLRCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEA 71
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCD- 148
+F M +++VSW AM++ +N + +A+ F MP R SYNAMI+ IK CD
Sbjct: 72 IFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIK--NKCDL 129
Query: 149 --AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR--RNEVSWTVMING 204
A LF ++P N VSY MI G+V+ G A L+ P R+ V+ V+++G
Sbjct: 130 GKAYELFCDIPEKNAVSYATMITGFVR---AGRFDEAEFLYAETPVKFRDSVASNVLLSG 186
Query: 205 LVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
+ G + EA +F M K VV+ ++M+ G+CK G++ +A +LF ++ R++ +W MI
Sbjct: 187 YLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMI 246
Query: 265 TGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
GY + G E+ LF +M + G ++ + +F AC +G Q + LV +
Sbjct: 247 DGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPL 306
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
+ DL + N+L++MYSK G + +++ FG D VSWN++I Q +A F++
Sbjct: 307 EFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEK 366
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
M D +++ ++ G+I + + LF +M
Sbjct: 367 MPG----KDMVSWTDMIKGFSGKGEISKCVELFGMM 398
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 240/430 (55%), Gaps = 21/430 (4%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N I + + GN+ AR +FDK K VVTWNSM++ Y +G + +F +M + V
Sbjct: 232 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYV 291
Query: 100 ----VSWNAMVAGCVQ------NDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
S+ +++ C + L + + + ++N + A++ + K + DA
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRT--ALMVAYSKCTAMLDA 349
Query: 150 QRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMING 204
RLFKE+ C NVVS+T MI G++ + G A LF M R+ NE +++V++
Sbjct: 350 LRLFKEIGCVGNVVSWTAMISGFL---QNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 205 LVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
L E ++ +++ TA++ + K GKV+EA +F I +DI +W+ M+
Sbjct: 407 LPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL-ALLDQGRQTYALVIKHGF 323
GYAQ G E A+ +F ++ + G++P++ F S+ CA+ A + QG+Q + IK
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
DS L V++AL+TMY+K G+I +E F + + D+VSWN++I+ +AQH KA F +
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKE 586
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
M V+ DG+TF+ + + C AG ++E F++MV D I P EH +C+VD+ SRAG
Sbjct: 587 MKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAG 646
Query: 444 QLQRACEIIR 453
QL++A ++I
Sbjct: 647 QLEKAMKVIE 656
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/458 (25%), Positives = 200/458 (43%), Gaps = 86/458 (18%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ + + N R+VFD+M ++VVTW ++++ Y + LF M M+N
Sbjct: 135 VDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF--MRMQN----- 187
Query: 104 AMVAGCVQNDMLDEAFNYFAA---MPERNAASYNAMI-SGFIKFGRLCDAQRLFKEMPCP 159
G N +F + AA + E + + +K G L K +P
Sbjct: 188 ---EGTQPN-----SFTFAAALGVLAEEGVGGRGLQVHTVVVKNG-------LDKTIPVS 232
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG 219
N +I+ Y+K G + +AR LFD ++ V+W MI+G NGL EA +F
Sbjct: 233 N-----SLINLYLKC---GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 220 RMPQKNVVAS---------------------------------------TAMITGFCKQG 240
M V S TA++ + K
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT 344
Query: 241 KVDEAWTLFQQIRC-RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
+ +A LF++I C ++ SW MI+G+ QN EEA++LFS+M R G++P++ + +
Sbjct: 345 AMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
TA ++ + +A V+K ++ +V AL+ Y K G + ++ F DIV
Sbjct: 405 TALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIV 460
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+W+ ++A +AQ A F ++ G++P+ TF S+L+VC + SM
Sbjct: 461 AWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVC---AATNASMGQ-GKQ 516
Query: 420 VHDYGIPPRSEHYAC----LVDVMSRAGQLQRACEIIR 453
H + I R + C L+ + ++ G ++ A E+ +
Sbjct: 517 FHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK 554
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 158/373 (42%), Gaps = 82/373 (21%)
Query: 108 GCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF-------KEMPCP- 159
G V + L A N F P R+ SY +++ GF + GR +A+RLF EM C
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 160 -------------------------------NVVSYTVMIDGYVKVKEGGGIARARALFD 188
+V T ++D Y+K G R +FD
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMK---GSNFKDGRKVFD 152
Query: 189 AMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ------------------------- 223
M RN V+WT +I+G N + +E LF RM
Sbjct: 153 EMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 224 --------------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQ 269
K + S ++I + K G V +A LF + + + +WN MI+GYA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 270 NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSV 329
NG EAL +F M ++ + F S+ CA+L L Q + V+K+GF D ++
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 330 NNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
AL+ YSKC +++D+ F + ++VSW +I+ F Q+ +A F +M G
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 389 VRPDGITFLSLLS 401
VRP+ T+ +L+
Sbjct: 393 VRPNEFTYSVILT 405
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 136/275 (49%), Gaps = 15/275 (5%)
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN-EVS 197
G + RL +A LF + P + SY ++ G+ + G A+ LF + R E+
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSR---DGRTQEAKRLFLNIHRLGMEMD 92
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQ---------KNVVASTAMITGFCKQGKVDEAWTL 248
++ + L + + ELFGR +V T+++ + K + +
Sbjct: 93 CSIFSSVLKVSATLCD--ELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKV 150
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F +++ R++ +W +I+GYA+N +E L LF +M G QP+ F + A +
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+G Q + +V+K+G D + V+N+L+ +Y KCG++ + + F +T +V+WN++I+ +
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
A + L +A F M VR +F S++ +C
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLC 305
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 7/217 (3%)
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
G ++ A LF + RD S+ ++ G++++GR +EA LF + R GM+ D I
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
F S+ A+L GRQ + IK GF D+SV +LV Y K + D F +
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
+ ++V+W T+I+ +A++ + + + F +M G +P+ TF + L V G +
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 415 LFNLMVH---DYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ ++V D IP + L+++ + G +++A
Sbjct: 216 VHTVVVKNGLDKTIPVSNS----LINLYLKCGNVRKA 248
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/536 (28%), Positives = 255/536 (47%), Gaps = 119/536 (22%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA---LFDA 93
+ AN+ + +++ G + A +F+ + KDVV+WNS++T Y +G S LF
Sbjct: 49 IQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFRE 108
Query: 94 MPMKNVVSWNAMVAGCVQND---------------------------------------M 114
M ++++ +AG + + +
Sbjct: 109 MRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGL 168
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF------KEMPCPNVVSYTVMI 168
+++ FA MPERN +++ M+SG+ GR+ +A ++F KE + +T ++
Sbjct: 169 VEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVL 228
Query: 169 DGY--------------VKVKEG--GGIARARAL----------------FDAMPRRNEV 196
+ +K G G +A + AL FD+ RN +
Sbjct: 229 SSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSI 288
Query: 197 SWTVMINGLVENGLYEEAWELFGRM------P---------------------------- 222
+W+ M+ G +NG EA +LF RM P
Sbjct: 289 TWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFL 348
Query: 223 -----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
++++ A+TA++ + K G + +A F ++ RD+A W +I+GY QN EEAL
Sbjct: 349 LKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEAL 408
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
L+ +M G+ P+D S+ AC+SLA L+ G+Q + IKHGF ++ + +AL TMY
Sbjct: 409 ILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMY 468
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
SKCGS+ D L F +T D+VSWN +I+ + + +A F++M+A G+ PD +TF+
Sbjct: 469 SKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFV 528
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+++S C G ++ FN+M G+ P+ +HYAC+VD++SRAGQL+ A E I
Sbjct: 529 NIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIE 584
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 45/209 (21%)
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+T + P + T + L GR + +I+ G + + N LV Y+KCG +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQH---VLYYKARSYFDQMIAVGVRPDGITF----- 396
+ F D+VSWN++I ++Q+ Y F +M A + P+ T
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 397 ------------------------------LSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
SL+ + C+AG +++ + +F M P
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYM------P 180
Query: 427 PRSEH-YACLVDVMSRAGQLQRACEIIRL 454
R+ + ++ +V + G+++ A ++ L
Sbjct: 181 ERNTYTWSTMVSGYATRGRVEEAIKVFNL 209
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 161/564 (28%), Positives = 257/564 (45%), Gaps = 129/564 (22%)
Query: 7 VSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTK 66
+S+ KP + R ++ ++V + N ++ + AGN+ AARQVFDKMP
Sbjct: 19 ISLLQKPVEENIVRISNQVMV---------KFDPNSHLRSLINAGNLRAARQVFDKMPHG 69
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAM--------PMKNVVSWNAMVAGCVQN------ 112
D+V+W S++ Y + + LF AM P +V+S ++ C Q+
Sbjct: 70 DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLS--VVLKACGQSSNIAYG 127
Query: 113 -----------------------DM------LDEAFNYFAAMPERNAASYNAMISGFIKF 143
DM +D++ F+ MP RNA ++ A+I+G +
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHA 187
Query: 144 GRLCDAQRLFKEMPCPNVVSYT-------------------------VMIDGYVKV---- 174
GR + F EM +S T V++ G+V
Sbjct: 188 GRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVA 247
Query: 175 -------KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------ 221
E G + LF+ M R+ VSWT +I G +A E F +M
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVP 307
Query: 222 PQKNVVAS---------------------------------TAMITGFCKQGKVDEAWTL 248
P + AS +M+ + G + A L
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL 367
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
FQ +RCRDI SW+ +I GY Q G GEE FS M ++G +P D SL + ++A++
Sbjct: 368 FQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI 427
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+ GRQ +AL + G + + +V ++L+ MYSKCGSI ++ + FG+T + DIVS +I +
Sbjct: 428 EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGY 487
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
A+H +A F++ + VG RPD +TF+S+L+ C +G++D + FN+M Y + P
Sbjct: 488 AEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPA 547
Query: 429 SEHYACLVDVMSRAGQLQRACEII 452
EHY C+VD++ RAG+L A ++I
Sbjct: 548 KEHYGCMVDLLCRAGRLSDAEKMI 571
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 136/300 (45%), Gaps = 40/300 (13%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM------ 125
NSM+ Y G + LF M ++++SW+ ++ G Q +E F YF+ M
Sbjct: 349 NSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTK 408
Query: 126 PERNAASYNAMISG---FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR 182
P A + +SG I+ GR A L + N + +I+ Y K G I
Sbjct: 409 PTDFALASLLSVSGNMAVIEGGRQVHALALCFGLE-QNSTVRSSLINMYSKC---GSIKE 464
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCK 238
A +F R + VS T MING E+G +EA +LF + + + V +++T
Sbjct: 465 ASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTH 524
Query: 239 QGKVDEAWTLFQQIRCRDIASWNI---------MITGYAQNGRGEEALNLFSQMVRTGMQ 289
G++D + F ++ ++N+ M+ + GR +A + ++M +
Sbjct: 525 SGQLDLGFHYFNMMQ----ETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEM---SWK 577
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM---YSKCGSIVDS 346
DD+++ +L AC + +++GR+ ++ + D + ALVT+ YS G++ ++
Sbjct: 578 KDDVVWTTLLIACKAKGDIERGRRAAERIL----ELDPTCATALVTLANIYSSTGNLEEA 633
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 140/488 (28%), Positives = 235/488 (48%), Gaps = 83/488 (17%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ A++ + T AR+VFD++P ++ +WN++L AY +G + F+ +P ++ V+WN
Sbjct: 48 VHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWN 107
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNAA--------------SYNAMIS----------- 138
++ G + ++ A + M +A S N +S
Sbjct: 108 VLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIK 167
Query: 139 -GFIKF--------------GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
GF + G + DA+++F + N V Y ++ G + G I A
Sbjct: 168 LGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLAC---GMIEDA 224
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP--------------------- 222
LF M ++ VSW MI GL +NGL +EA E F M
Sbjct: 225 LQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGL 283
Query: 223 ------------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
Q ++ +A+I +CK + A T+F +++ +++ SW M+
Sbjct: 284 GAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMV 343
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
GY Q GR EEA+ +F M R+G+ PD +ACA+++ L++G Q + I G
Sbjct: 344 VGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLI 403
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
++V+N+LVT+Y KCG I DS F + + D VSW +++A+AQ + FD+M
Sbjct: 404 HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM 463
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
+ G++PDG+T ++S C RAG +++ F LM +YGI P HY+C++D+ SR+G+
Sbjct: 464 VQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGR 523
Query: 445 LQRACEII 452
L+ A I
Sbjct: 524 LEEAMRFI 531
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 178/369 (48%), Gaps = 17/369 (4%)
Query: 51 GNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCV 110
GNI A +P + +N+++ AY ++R +FD +P N+ SWN ++
Sbjct: 30 GNIIRA------LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 111 QNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP---CPNVVSYTVM 167
+ ++ E + F +P+R+ ++N +I G+ G + A + + M N+ T+M
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 168 IDGYVKVKEGGG-IARARALFDAMPRRNEVSWTVMINGLV----ENGLYEEAWELFGRMP 222
+K+ G ++ + + + + S+ ++ + L+ G +A ++F +
Sbjct: 144 T--MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLD 201
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+N V +++ G G +++A LF+ + +D SW MI G AQNG +EA+ F +
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFRE 260
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M G++ D F S+ AC L +++G+Q +A +I+ F + V +AL+ MY KC
Sbjct: 261 MKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKC 320
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ ++ F + Q ++VSW ++ + Q +A F M G+ PD T +S
Sbjct: 321 LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISA 380
Query: 403 CCRAGKIDE 411
C ++E
Sbjct: 381 CANVSSLEE 389
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 151/363 (41%), Gaps = 78/363 (21%)
Query: 51 GNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMV 106
G I A Q+F M KD V+W +M+ +G + + F M ++ + + +++
Sbjct: 219 GMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASY----NAMISGFIKFGRLCDAQRLFKEMPCPNVV 162
C ++E A + N + +A+I + K L A+ +F M NVV
Sbjct: 278 PACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 337
Query: 163 SYTVMIDGY---------VKV-----KEG--------GGIARARALFDAMPRRNEVSWTV 200
S+T M+ GY VK+ + G G A A ++ ++
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKA 397
Query: 201 MINGLV--------------ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAW 246
+ +GL+ + G +++ LF M ++ V+ TAM++
Sbjct: 398 ITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSA----------- 446
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
YAQ GR E + LF +MV+ G++PD + + +AC+
Sbjct: 447 --------------------YAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAG 486
Query: 307 LLDQGRQTYALVI-KHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTI 364
L+++G++ + L+ ++G + + ++ ++S+ G + ++ G PD + W T+
Sbjct: 487 LVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 365 IAA 367
++A
Sbjct: 547 LSA 549
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 94/199 (47%), Gaps = 14/199 (7%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N + + + G+I + ++F++M +D V+W +M++AY G + LFD M +
Sbjct: 409 SNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 100 ----VSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQ 150
V+ +++ C + ++++ YF M + Y+ MI F + GRL +A
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528
Query: 151 RLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMINGLVE 207
R MP P+ + +T ++ + K I + A +L + P + +T++ +
Sbjct: 529 RFINGMPFPPDAIGWTTLLSA-CRNKGNLEIGKWAAESLIELDP-HHPAGYTLLSSIYAS 586
Query: 208 NGLYEEAWELFGRMPQKNV 226
G ++ +L M +KNV
Sbjct: 587 KGKWDSVAQLRRGMREKNV 605
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 20/239 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTW----NSMLTAYWHSGFPQHSRALF 91
D Y I+A + ++ Q K T ++ + NS++T Y G S LF
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLC 147
+ M +++ VSW AMV+ Q E F M + + + +IS + G +
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 148 DAQRLFKEMP-----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP-RRNEVSWTVM 201
QR FK M P++ Y+ MID + + G + A + MP + + WT +
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR---SGRLEEAMRFINGMPFPPDAIGWTTL 546
Query: 202 INGLVENGLYEE---AWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
++ G E A E + + T + + + +GK D L + +R +++
Sbjct: 547 LSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNV 605
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 230/430 (53%), Gaps = 20/430 (4%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
N +A + + + +AR+VFD+M +DV++WNS++ Y +G + ++F M + +
Sbjct: 233 GNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 292
Query: 100 ----VSWNAMVAGCVQNDM--LDEAFNYFA--AMPERNAASYNAMISGFIKFGRLCDAQR 151
+ ++ AGC + + L A + A R N ++ + K G L A+
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVE 207
+F+EM +VVSYT MI GY + G A LF+ M + + T ++N
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAR---EGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCAR 409
Query: 208 NGLYEEAWELFGRMPQKN----VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
L +E + + + + + S A++ + K G + EA +F ++R +DI SWN +
Sbjct: 410 YRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTI 469
Query: 264 ITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
I GY++N EAL+LF+ ++ PD+ + ACASL+ D+GR+ + ++++G
Sbjct: 470 IGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNG 529
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
+ SD V N+LV MY+KCG+++ + + F + D+VSW +IA + H +A + F+
Sbjct: 530 YFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFN 589
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
QM G+ D I+F+SLL C +G +DE FN+M H+ I P EHYAC+VD+++R
Sbjct: 590 QMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLART 649
Query: 443 GQLQRACEII 452
G L +A I
Sbjct: 650 GDLIKAYRFI 659
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 147/312 (47%), Gaps = 44/312 (14%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM---------------- 221
G + A +FD + + W +++N L ++G + + LF +M
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 222 ------------------------PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
++N V ++ ++ + K +VD A +F ++ RD+
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS-LVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWN +I GY NG E+ L++F QM+ +G++ D VS+F CA L+ GR +++
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+K F + N L+ MYSKCG + ++ F + S +VS+ ++IA +A+ L +A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN-LMVHDYGIPPRSEHYACLV 436
F++M G+ PD T ++L+ C R +DE + + +D G + L+
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSN--ALM 439
Query: 437 DVMSRAGQLQRA 448
D+ ++ G +Q A
Sbjct: 440 DMYAKCGSMQEA 451
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 106/218 (48%), Gaps = 9/218 (4%)
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
G + EA +F +++ WNI++ A++G ++ LF +M+ +G++ D F +
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVS 202
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
+ +SL + G Q + ++K GF SV N+LV Y K + + F + ++ D++
Sbjct: 203 KSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI 262
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
SWN+II + + L K S F QM+ G+ D T +S+ + C D +
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCA-----DSRLISLGRA 317
Query: 420 VHDYGIP---PRSEHYA-CLVDVMSRAGQLQRACEIIR 453
VH G+ R + + L+D+ S+ G L A + R
Sbjct: 318 VHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFR 355
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 99/211 (46%), Gaps = 20/211 (9%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+D++ +N + +++ G++ A VF +M KD+++WN+++ Y + + + +LF+ +
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLL 489
Query: 95 PMKNVVSWNAMVAGCV--------QNDMLDEAFNYF---AAMPERNAASYNAMISGFIKF 143
+ S + CV D E Y +R+ A N+++ + K
Sbjct: 490 LEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVA--NSLVDMYAKC 547
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVSWT 199
G L A LF ++ ++VS+TVMI GY G A ALF+ M + +E+S+
Sbjct: 548 GALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFG---KEAIALFNQMRQAGIEADEISFV 604
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVVAST 230
++ +GL +E W F M + + T
Sbjct: 605 SLLYACSHSGLVDEGWRFFNIMRHECKIEPT 635
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
R + N + + ++G E A+ L + + P L S+ CA L G++
Sbjct: 59 RSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRTL--CSVLQLCADSKSLKDGKEV 116
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ +GF D ++ + L MY+ CG + ++ F + + WN ++ A+ +
Sbjct: 117 DNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDF 176
Query: 375 YKARSYFDQMIAVGVRPDGITF 396
+ F +M++ GV D TF
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTF 198
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 128/377 (33%), Positives = 207/377 (54%), Gaps = 15/377 (3%)
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-NAASYNAMISGFIKFGR 145
+R +FD + K+ SW M+ G V+N D M + +YNAMISG++ G
Sbjct: 207 ARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGF 266
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYV------KVKEGGGIARARALFDAMPRRNEVSW- 198
+A + + M VS + +D + G + + + + RR + S+
Sbjct: 267 YQEALEMVRRM-----VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH 321
Query: 199 --TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+++ + G ++EA +F +MP K++V+ A+++G+ G + EA +F++++ ++
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
I SW IMI+G A+NG GEE L LFS M R G +P D F +CA L G+Q +A
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHA 441
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
++K GFDS LS NAL+TMY+KCG + ++ F D VSWN +IAA QH +
Sbjct: 442 QLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAE 501
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
A +++M+ G+RPD IT L++L+ C AG +D+ F+ M Y IPP ++HYA L+
Sbjct: 502 AVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLI 561
Query: 437 DVMSRAGQLQRACEIIR 453
D++ R+G+ A +I
Sbjct: 562 DLLCRSGKFSDAESVIE 578
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 164/342 (47%), Gaps = 83/342 (24%)
Query: 53 ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP--MKNVVSWNAMVAGCV 110
+ +AR+VFD++ KD +W +M+T Y +G+ L + M MK +V++NAM++G V
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMK-LVAYNAMISGYV 262
Query: 111 QNDMLDEA----------------FNY-------------------FAAMPERNAASY-- 133
EA F Y A + R S+
Sbjct: 263 NRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHF 322
Query: 134 -NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR 192
N+++S + K G+ +A+ +F++MP ++VS+ ++ GYV G I A+ +F M
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVS---SGHIGEAKLIFKEMKE 379
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMPQK---------------------------- 224
+N +SW +MI+GL ENG EE +LF M ++
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 225 -----------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
++ A A+IT + K G V+EA +F+ + C D SWN +I Q+G G
Sbjct: 440 HAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHG 499
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
EA++++ +M++ G++PD + +++ TAC+ L+DQGR+ +
Sbjct: 500 AEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYF 541
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 25 LLVFAKHFSSYDVYRANLN-------IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTA 77
LL K +Y + R + + ++ + + G AR +F+KMP KD+V+WN++L+
Sbjct: 301 LLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSG 360
Query: 78 YWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI 137
Y SG ++ +F M KN++SW M++G +N +E F+ M +
Sbjct: 361 YVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAF 420
Query: 138 SGFIK----FGRLCDAQ----RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDA 189
SG IK G C+ Q +L K ++ + +I Y K G + AR +F
Sbjct: 421 SGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKC---GVVEEARQVFRT 477
Query: 190 MPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEA 245
MP + VSW +I L ++G EA +++ M +K + + ++T G VD+
Sbjct: 478 MPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQG 537
Query: 246 WTLFQQIR 253
F +
Sbjct: 538 RKYFDSME 545
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 45/236 (19%)
Query: 214 AWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ--IRCRDIASWNIMITGYAQNG 271
A +LF + + + +A T M++G+C G + A +F++ + RD +N MITG++ N
Sbjct: 68 ARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNN 127
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL----DQGRQTYALVIKHGFDSDL 327
G A+NLF +M G +PD+ F S+ A LAL+ Q Q +A +K G
Sbjct: 128 DGYSAINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYIT 184
Query: 328 SVNNALVTMYSKCGSI------------------------------------VDSELAFG 351
SV+NALV++YSKC S + EL G
Sbjct: 185 SVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEG 244
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
+V++N +I+ + Y +A +M++ G+ D T+ S++ C AG
Sbjct: 245 MDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/257 (19%), Positives = 121/257 (47%), Gaps = 21/257 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+ N ++ + +G+I A+ +F +M K++++W M++ +GF + LF M
Sbjct: 350 DLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMK 409
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAF----NYFAAMP----ERNAASYNAMISGFIKFGRLC 147
+ + +G +++ + A+ Y A + + + ++ NA+I+ + K G +
Sbjct: 410 REGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE 469
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMIN 203
+A+++F+ MPC + VS+ +I + + G A A +++ M ++ + ++ ++
Sbjct: 470 EARQVFRTMPCLDSVSWNALI---AALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLT 526
Query: 204 GLVENGLYEEAWELFGRMPQKNVVASTA-----MITGFCKQGKVDEAWTLFQQIRCRDIA 258
GL ++ + F M + A +I C+ GK +A ++ + + + A
Sbjct: 527 ACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTA 586
Query: 259 S-WNIMITGYAQNGRGE 274
W +++G +G E
Sbjct: 587 EIWEALLSGCRVHGNME 603
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 212/427 (49%), Gaps = 40/427 (9%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRA 89
S D + +L + A SR G + Q+ + D+ N ++ Y G SR
Sbjct: 118 SVDKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQ 177
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
+FD MP +R++ SYN+MI G++K G + A
Sbjct: 178 MFDRMP-------------------------------KRDSVSYNSMIDGYVKCGLIVSA 206
Query: 150 QRLFKEMPC--PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
+ LF MP N++S+ MI GY + +G IA LF MP ++ +SW MI+G V+
Sbjct: 207 RELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASK--LFADMPEKDLISWNSMIDGYVK 264
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
+G E+A LF MP+++VV MI G+ K G V A TLF Q+ RD+ ++N M+ GY
Sbjct: 265 HGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGY 324
Query: 268 AQNGRGEEALNLFSQMVR-TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
QN EAL +FS M + + + PDD V + A A L L + + +++ F
Sbjct: 325 VQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLG 384
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ AL+ MYSKCGSI + L F I WN +I A H L A Q+
Sbjct: 385 GKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIER 444
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
+ ++PD ITF+ +L+ C +G + E + F LM + I PR +HY C+VD++SR+G ++
Sbjct: 445 LSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 447 RACEIIR 453
A +I
Sbjct: 505 LAKNLIE 511
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 189/409 (46%), Gaps = 49/409 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ N I + + G + +RQ+FD+MP +D V++NSM+ Y G +R LFD MP
Sbjct: 155 DLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMP 214
Query: 96 M----------------------------------KNVVSWNAMVAGCVQNDMLDEAFNY 121
M K+++SWN+M+ G V++ +++A
Sbjct: 215 MEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGL 274
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
F MP R+ ++ MI G+ K G + A+ LF +MP +VV+Y M+ GYV+ K
Sbjct: 275 FDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYH---M 331
Query: 182 RARALFDAMPRR-----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV----ASTAM 232
A +F M + ++ + +++ + + G +A ++ + +K A+
Sbjct: 332 EALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVAL 391
Query: 233 ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
I + K G + A +F+ I + I WN MI G A +G GE A ++ Q+ R ++PDD
Sbjct: 392 IDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDD 451
Query: 293 LIFVSLFTACASLALLDQGRQTYALV-IKHGFDSDLSVNNALVTMYSKCGSI-VDSELAF 350
+ FV + AC+ L+ +G + L+ KH + L +V + S+ GSI + L
Sbjct: 452 ITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIE 511
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITFLS 398
+P+ V W T + A + H + +I G P LS
Sbjct: 512 EMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLS 560
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN +I ++ +AL L M+ G+ D + AC+ L + G Q + +
Sbjct: 89 WNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFLK 148
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K G SDL + N L+ +Y KCG + S F + + D VS+N++I + + L AR
Sbjct: 149 KTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARE 208
Query: 380 YFDQM 384
FD M
Sbjct: 209 LFDLM 213
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 229 bits (583), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 151/500 (30%), Positives = 234/500 (46%), Gaps = 102/500 (20%)
Query: 39 RANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF------D 92
R IA+ +++G I +ARQVFD MP D V WN+MLT+Y G Q + ALF D
Sbjct: 6 RLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSD 65
Query: 93 AMPMKNVVSWNAMVAGC-----------VQNDMLDEAFNYFAAMPERNAASYNAMISGFI 141
A P + S+ A+++ C +Q+ ++ F A++P N++I +
Sbjct: 66 AKP--DDYSFTAILSTCASLGNVKFGRKIQSLVIRSGF--CASLPVN-----NSLIDMYG 116
Query: 142 KFGRLCDAQRLFKEMPCP--NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT 199
K A ++F++M C N V++ ++ Y+ ++ A +F MP+R +W
Sbjct: 117 KCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQ---FEAALDVFVEMPKRVAFAWN 173
Query: 200 VMINGLVENGLYEEAWELF-------------------------------GRMPQ----K 224
+MI+G G E LF GRM K
Sbjct: 174 IMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLK 233
Query: 225 N-----VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN------------------ 261
N V A ++++ + K G D+A + I SWN
Sbjct: 234 NGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEV 293
Query: 262 -------------IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
MITGY +NG GE+AL F +M+++G+ D + ++ AC+ LALL
Sbjct: 294 FHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALL 353
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
G+ + +I GF V NALV +Y+KCG I +++ AFG + D+VSWNT++ AF
Sbjct: 354 GHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAF 413
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
H L +A +D MIA G++PD +TF+ LL+ C +G ++E +F MV DY IP
Sbjct: 414 GVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLE 473
Query: 429 SEHYACLVDVMSRAGQLQRA 448
+H C++D+ R G L A
Sbjct: 474 VDHVTCMIDMFGRGGHLAEA 493
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 183/424 (43%), Gaps = 79/424 (18%)
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE 127
+V S + + SG +R +FD MP + V+WN M+ + + EA F +
Sbjct: 4 LVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRF 63
Query: 128 RNAA----SYNAMIS-----GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG 178
+A S+ A++S G +KFGR + + + C ++ +ID Y K +
Sbjct: 64 SDAKPDDYSFTAILSTCASLGNVKFGRKIQS-LVIRSGFCASLPVNNSLIDMYGKCSD-- 120
Query: 179 GIARARALFDAM--PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF 236
A +F M RNEV+W ++ + +E A ++F MP++ A
Sbjct: 121 -TLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFA-------- 171
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
WNIMI+G+A G+ E L+LF +M+ + +PD F
Sbjct: 172 -----------------------WNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFS 208
Query: 297 SLFTAC-ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG-------------- 341
SL AC A + + GR +A+++K+G+ S + N++++ Y+K G
Sbjct: 209 SLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV 268
Query: 342 -------SIVDSELAFGQTS----------QPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
SI+D+ + G+T + +IV+W T+I + ++ +A +F +M
Sbjct: 269 LTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEM 328
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
+ GV D + ++L C + + ++H G + LV++ ++ G
Sbjct: 329 MKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH-CGFQGYAYVGNALVNLYAKCGD 387
Query: 445 LQRA 448
++ A
Sbjct: 388 IKEA 391
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 160/358 (44%), Gaps = 37/358 (10%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
NS+L+ Y G + +++ + VSWN+++ C++ ++A F PE+N
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIV 303
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
++ MI+G+ + G A R F EM V S + G +
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLAL----------- 352
Query: 192 RRNEVSWTVMING-LVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQ 250
+ MI+G L+ G Q A++ + K G + EA F
Sbjct: 353 ----LGHGKMIHGCLIHCGF------------QGYAYVGNALVNLYAKCGDIKEADRAFG 396
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
I +D+ SWN M+ + +G ++AL L+ M+ +G++PD++ F+ L T C+ L+++
Sbjct: 397 DIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEE 456
Query: 311 GRQTYALVIKHGFDSDLSVNN--ALVTMYSKCGSIVDS-ELAFGQTS----QPDIVSWNT 363
G + ++K + L V++ ++ M+ + G + ++ +LA +S + SW T
Sbjct: 457 GCMIFESMVKD-YRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWET 515
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
++ A + H R +++ + + ++F+ L ++ C G+ E ++ MV
Sbjct: 516 LLGACSTHWHTELGRE-VSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVE 572
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 128/305 (41%), Gaps = 21/305 (6%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH 86
V K+ S V N ++ +++ G+ A + + + V+WNS++ A G +
Sbjct: 230 VMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEK 289
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIK 142
+ +F P KN+V+W M+ G +N ++A +F M + S Y A++
Sbjct: 290 ALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSG 349
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV-KEGGGIARARALFDAMPRRNEVSWTVM 201
L + + + Y + + V + + G I A F + ++ VSW M
Sbjct: 350 LALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTM 409
Query: 202 INGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRD- 256
+ +GL ++A +L+ M + V ++T G V+E +F+ + +D
Sbjct: 410 LFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESM-VKDY 468
Query: 257 -----IASWNIMITGYAQNGRGEEALNL---FSQMVRTGMQPDDLIFVSLFTACASLALL 308
+ MI + + G EA +L +S +V ++ + +L AC++
Sbjct: 469 RIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTD--SSNNSSWETLLGACSTHWHT 526
Query: 309 DQGRQ 313
+ GR+
Sbjct: 527 ELGRE 531
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 131/425 (30%), Positives = 228/425 (53%), Gaps = 23/425 (5%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SW 102
+++ +I A F + ++VV WN ML AY ++S +F M ++ +V ++
Sbjct: 434 YAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTY 493
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERN----AASYNAMISGFIKFGRLCDAQRLFKEMPC 158
+++ C++ L+ + + + N A + +I + K G+L A +
Sbjct: 494 PSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAG 553
Query: 159 PNVVSYTVMIDGYVKVK-EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL 217
+VVS+T MI GY + + + R + D R +EV T ++ +E ++
Sbjct: 554 KDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI 613
Query: 218 FGR---------MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
+ +P +N A++T + + GK++E++ F+Q D +WN +++G+
Sbjct: 614 HAQACVSGFSSDLPFQN-----ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
Q+G EEAL +F +M R G+ ++ F S A + A + QG+Q +A++ K G+DS+
Sbjct: 669 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 728
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
V NAL++MY+KCGSI D+E F + S + VSWN II A+++H +A FDQMI
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSN 788
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
VRP+ +T + +LS C G +D+ + F M +YG+ P+ EHY C+VD+++RAG L RA
Sbjct: 789 VRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRA 848
Query: 449 CEIIR 453
E I+
Sbjct: 849 KEFIQ 853
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 204/440 (46%), Gaps = 23/440 (5%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
LV FSS D Y N ++ + GN+ +A +F M +D VT+N+++ G+ +
Sbjct: 313 LVLKLGFSS-DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGE 371
Query: 86 HSRALFDAM------PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN----A 135
+ LF M P N ++ ++V C + L A + AS N A
Sbjct: 372 KAMELFKRMHLDGLEPDSNTLA--SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGY---VKVKEGGGIARARALFDAMPR 192
+++ + K + A F E NVV + VM+ Y ++ I R + + +P
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVP- 488
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTL 248
N+ ++ ++ + G E ++ ++ Q N + +I + K GK+D AW +
Sbjct: 489 -NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
+ +D+ SW MI GY Q ++AL F QM+ G++ D++ + +ACA L L
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQAL 607
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+G+Q +A GF SDL NALVT+YS+CG I +S LAF QT D ++WN +++ F
Sbjct: 608 KEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGF 667
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
Q +A F +M G+ + TF S + + + + + ++ G
Sbjct: 668 QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQV-HAVITKTGYDSE 726
Query: 429 SEHYACLVDVMSRAGQLQRA 448
+E L+ + ++ G + A
Sbjct: 727 TEVCNALISMYAKCGSISDA 746
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 179/416 (43%), Gaps = 62/416 (14%)
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGR---- 145
+FD MP + + +WN M+ +++ E F F M N SG ++ R
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 146 ------LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT 199
A+ L++ + VV +ID Y + G + AR +FD + ++ SW
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSR---NGFVDLARRVFDGLRLKDHSSWV 257
Query: 200 VMINGLVENGLYEEAWELF------GRMPQKNVVAS------------------------ 229
MI+GL +N EA LF G MP +S
Sbjct: 258 AMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL 317
Query: 230 ---------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
A+++ + G + A +F + RD ++N +I G +Q G GE+A+ LF
Sbjct: 318 GFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELF 377
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
+M G++PD SL AC++ L +G+Q +A K GF S+ + AL+ +Y+KC
Sbjct: 378 KRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKC 437
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
I + F +T ++V WN ++ A+ + F QM + P+ T+ S+L
Sbjct: 438 ADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSIL 497
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSE--HYAC--LVDVMSRAGQLQRACEII 452
C R G ++ +H I + Y C L+D+ ++ G+L A +I+
Sbjct: 498 KTCIRLGDLE-----LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/311 (29%), Positives = 139/311 (44%), Gaps = 34/311 (10%)
Query: 108 GCVQNDMLD---------EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
GC+ + D AF F MPER ++N MI + + LF M
Sbjct: 120 GCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVS 179
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
NV G ++ GG +A FD + ++ ++ GL
Sbjct: 180 ENVTPNEGTFSGVLEACRGGSVA-----FDVV---EQIHARILYQGL------------- 218
Query: 219 GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
+ + V +I + + G VD A +F +R +D +SW MI+G ++N EA+
Sbjct: 219 ----RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
LF M G+ P F S+ +AC + L+ G Q + LV+K GF SD V NALV++Y
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
G+++ +E F SQ D V++NT+I +Q KA F +M G+ PD T S
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLAS 394
Query: 399 LLSVCCRAGKI 409
L+ C G +
Sbjct: 395 LVVACSADGTL 405
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 187/439 (42%), Gaps = 50/439 (11%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDML 115
AR ++ + VV N ++ Y +GF +R +FD + +K+ SW AM++G +N+
Sbjct: 211 ARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECE 269
Query: 116 DEAFNYF------AAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMID 169
EA F MP A +++++S K L ++L + S T + +
Sbjct: 270 AEAIRLFCDMYVLGIMPTPYA--FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 170 GYVKVK-EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------P 222
V + G + A +F M +R+ V++ +INGL + G E+A ELF RM P
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 223 QKNVVAST---------------------------------AMITGFCKQGKVDEAWTLF 249
N +AS A++ + K ++ A F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
+ ++ WN+M+ Y + +F QM + P+ + S+ C L L+
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFA 369
G Q ++ +IK F + V + L+ MY+K G + + + + D+VSW T+IA +
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRS 429
Q+ KA + F QM+ G+R D + + +S C + E + + G
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQI-HAQACVSGFSSDL 626
Query: 430 EHYACLVDVMSRAGQLQRA 448
LV + SR G+++ +
Sbjct: 627 PFQNALVTLYSRCGKIEES 645
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 160/354 (45%), Gaps = 21/354 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+ Y ++ I +++ G + A + + KDVV+W +M+ Y F + F M
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGRLC 147
+ + V V+ C L E A +S NA+++ + + G++
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMIN 203
++ F++ + +++ ++ G+ ++ G A +F M R N ++ +
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGF---QQSGNNEEALRVFVRMNREGIDNNNFTFGSAVK 700
Query: 204 GLVENGLYEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
E ++ ++ + + + T A+I+ + K G + +A F ++ ++ S
Sbjct: 701 AASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS 760
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALV 318
WN +I Y+++G G EAL+ F QM+ + ++P+ + V + +AC+ + L+D+G + ++
Sbjct: 761 WNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMN 820
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
++G +V M ++ G + + E +PD + W T+++A H
Sbjct: 821 SEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVH 874
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 287 GMQPDDLIFVSLFTAC-ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
G++P+ L C + LD+GR+ ++ ++K G DS+ ++ L Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
+ F + + I +WN +I A L + F +M++ V P+ TF +L CR
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA-CR 197
Query: 406 AGKI 409
G +
Sbjct: 198 GGSV 201
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 221 bits (564), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/479 (30%), Positives = 236/479 (49%), Gaps = 61/479 (12%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V+ N +A +SR +++ AR+VFD+M DVV+WNS++ +Y G P+ + +F M
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 96 ----------------------------------------MKNVVSWNAMVAGCVQNDML 115
++N+ N +V + M+
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMM 280
Query: 116 DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP----NVVSYTVMIDGY 171
DEA F+ M ++ S+NAM++G+ + GR DA RLF++M +VV+++ I GY
Sbjct: 281 DEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGY 340
Query: 172 VKVKEG-GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG---RMP---QK 224
+ G + R + + + NEV+ +++G G E+ + P +K
Sbjct: 341 AQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRK 400
Query: 225 NVVASTAMITG-----FCKQGKVDEAWTLFQQI--RCRDIASWNIMITGYAQNGRGEEAL 277
N M+ + K KVD A +F + + RD+ +W +MI GY+Q+G +AL
Sbjct: 401 NGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKAL 460
Query: 278 NLFSQMVRTGMQ--PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS-DLSVNNALV 334
L S+M Q P+ ACASLA L G+Q +A +++ ++ L V+N L+
Sbjct: 461 ELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLI 520
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
MY+KCGSI D+ L F + V+W +++ + H +A FD+M +G + DG+
Sbjct: 521 DMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGV 580
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
T L +L C +G ID+ M FN M +G+ P EHYACLVD++ RAG+L A +I
Sbjct: 581 TLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIE 639
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 114/228 (50%), Gaps = 14/228 (6%)
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRD--IASWNIMITGYAQNGRGEEALNLFSQMVRT 286
++ +I+ + G + A +L ++ D + WN +I Y NG + L LF M
Sbjct: 62 TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSL 121
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
PD+ F +F AC ++ + G +AL + GF S++ V NALV MYS+C S+ D+
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITFLSLLSVCCR 405
F + S D+VSWN+II ++A+ A F +M G RPD IT +++L C
Sbjct: 182 RKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCAS 241
Query: 406 AG--KIDESMNLFNL---MVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
G + + ++ F + M+ + + CLVD+ ++ G + A
Sbjct: 242 LGTHSLGKQLHCFAVTSEMIQNMFVG------NCLVDMYAKCGMMDEA 283
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP- 95
++ +N I +++ G+I+ AR VFD M K+ VTW S++T Y G+ + + +FD M
Sbjct: 513 LFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRR 572
Query: 96 ---MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFGRLC 147
+ V+ ++ C + M+D+ YF M S Y ++ + GRL
Sbjct: 573 IGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLN 632
Query: 148 DAQRLFKEMPC--PNVVSYTVM----IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
A RL +EMP P VV + I G V++ E A + ++ S+T++
Sbjct: 633 AALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGE-----YAAEKITELASNHDGSYTLL 687
Query: 202 INGLVENGLYEEAWELFGRMPQKNV 226
N G +++ + M K V
Sbjct: 688 SNLYANAGRWKDVTRIRSLMRHKGV 712
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 198/349 (56%), Gaps = 12/349 (3%)
Query: 108 GCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP-CPNVVSYTV 166
GCV + A F MPERN A++NAMI G++ G A LF+E+ C N V++
Sbjct: 95 GCVVS-----ARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIE 149
Query: 167 MIDGYVKVKEGGGIARARALFDAMP--RRNEVSWTVMINGLVENGLYEEAWELFGRMPQK 224
MI GY K E I +AR LF+ MP +N +W+VM+ V N E+A + F +P+K
Sbjct: 150 MIKGYGKRIE---IEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEK 206
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
N + M++G+ + G V EA +F ++ RD+ WN +I GYAQNG ++A++ F M
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
G +PD + S+ +ACA LD GR+ ++L+ G + + V+NAL+ MY+KCG +
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLE 326
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
++ F S + N++I+ A H +A F M ++ ++PD ITF+++L+ C
Sbjct: 327 NATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACV 386
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G + E + +F+ M + P +H+ CL+ ++ R+G+L+ A +++
Sbjct: 387 HGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVK 434
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 172/352 (48%), Gaps = 43/352 (12%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFP----------- 84
DV + I+ + + G + +AR+VFD+MP ++V TWN+M+ Y +G
Sbjct: 80 DVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEIS 139
Query: 85 ---------------------QHSRALFDAMP--MKNVVSWNAMVAGCVQNDMLDEAFNY 121
+ +R LF+ MP +KNV +W+ M+ V N +++A +
Sbjct: 140 VCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKF 199
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
F +PE+NA ++ M+SG+ + G + +A+ +F + ++V + +I GY + G
Sbjct: 200 FEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGY--AQNGYSDD 257
Query: 182 RARALFDAMPRRNE---VSWTVMINGLVENGLYEEAWELFG----RMPQKNVVASTAMIT 234
A F+ E V+ + +++ ++G + E+ R + N S A+I
Sbjct: 258 AIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALID 317
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
+ K G ++ A ++F+ I R +A N MI+ A +G+G+EAL +FS M ++PD++
Sbjct: 318 MYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEIT 377
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
F+++ TAC L +G + ++ + ++ L+ + + G + ++
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEA 429
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 76/157 (48%), Gaps = 3/157 (1%)
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I + G +AL L+ + R G+ + + L + + G+ ++ IK G
Sbjct: 17 LIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKLLHSESIKFG 76
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
SD+ V ++L++MY KCG +V + F + + ++ +WN +I + + A F+
Sbjct: 77 VCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFE 136
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+ + V + +T++ ++ + +I+++ LF M
Sbjct: 137 E---ISVCRNTVTWIEMIKGYGKRIEIEKARELFERM 170
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 210/406 (51%), Gaps = 37/406 (9%)
Query: 53 ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SWNAMVAG 108
++ A + +++ + + T NS++ AY +S P+ + +F M + V S+ ++
Sbjct: 90 VSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKA 149
Query: 109 CVQNDMLDEAFNYFAAMPERNAASYNAMISG-FIKFGRLCDAQRLFKEMPCPNVVSYTVM 167
C F E I G FIK G + D +F E NV +
Sbjct: 150 CAA----------FCGFEE------GRQIHGLFIKSGLVTD---VFVENTLVNVYGRS-- 188
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
GY ++ AR + D MP R+ VSW +++ +E GL +EA LF M ++NV
Sbjct: 189 --GYFEI--------ARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEERNVE 238
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
+ MI+G+ G V EA +F + RD+ SWN M+T YA G E L +F++M+
Sbjct: 239 SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDS 298
Query: 288 MQ-PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
+ PD VS+ +ACASL L QG + + KHG + + + ALV MYSKCG I +
Sbjct: 299 TEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F TS+ D+ +WN+II+ + H L A F +M+ G +P+GITF+ +LS C
Sbjct: 359 LEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV 418
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
G +D++ LF +M Y + P EHY C+VD++ R G+++ A E++
Sbjct: 419 GMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 154/344 (44%), Gaps = 57/344 (16%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
R H L F K DV+ N + + R+G AR+V D+MP +D V+WNS+L+AY
Sbjct: 159 GRQIHGL--FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAY 216
Query: 79 WHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMIS 138
G +RALFD M +NV SWN M++G ++ EA F +MP R+ S+NAM++
Sbjct: 217 LEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVT 276
Query: 139 GFIKFGRLCDAQRLFKEM------------------PCPNVVSYT------VMIDGYVKV 174
+ G + +F +M C ++ S + V ID +
Sbjct: 277 AYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIE 336
Query: 175 KEG-------------GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM 221
EG G I +A +F A +R+ +W +I+ L +GL ++A E+F M
Sbjct: 337 IEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM 396
Query: 222 P----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC-----RDIASWNIMITGYAQNGR 272
+ N + +++ G +D+A LF+ + I + M+ + G+
Sbjct: 397 VYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGK 456
Query: 273 GEEALNLFSQMVRTGMQPDD---LIFVSLFTACASLALLDQGRQ 313
EEA L +++ P D ++ SL AC L+Q +
Sbjct: 457 IEEAEELVNEI------PADEASILLESLLGACKRFGQLEQAER 494
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 127/291 (43%), Gaps = 56/291 (19%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF--------- 91
N I+ ++ AG + A++VFD MP +DVV+WN+M+TAY H G +F
Sbjct: 241 NFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE 300
Query: 92 --DAMPMKNVVSWNAMVAGCVQND-----------------------------MLDEAFN 120
D + +V+S A + Q + +D+A
Sbjct: 301 KPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALE 360
Query: 121 YFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKE 176
F A +R+ +++N++IS G DA +F EM PN +++ ++ V
Sbjct: 361 VFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHV-- 418
Query: 177 GGGIARARALFDAMPRRNEVSWTV-----MINGLVENGLYEEAWELFGRMPQKNVVASTA 231
G + +AR LF+ M V T+ M++ L G EEA EL +P
Sbjct: 419 -GMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLE 477
Query: 232 MITGFCKQ-GKVDEAWTL---FQQIRCRDIASWNIMITGYAQNGRGEEALN 278
+ G CK+ G++++A + ++ RD + + M YA +GR E+ ++
Sbjct: 478 SLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVID 528
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 103/248 (41%), Gaps = 45/248 (18%)
Query: 211 YEEAWELFGRMPQKNVVA----STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
+EE ++ G + +V ++ + + G + A + ++ RD SWN +++
Sbjct: 156 FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSA 215
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
Y + G +EA LF +M ++
Sbjct: 216 YLEKGLVDEARALFDEMEERNVES------------------------------------ 239
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
N +++ Y+ G + +++ F D+VSWN ++ A+A Y + F++M+
Sbjct: 240 ---WNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLD 296
Query: 387 VGV-RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
+PDG T +S+LS C G + + ++ + +GI LVD+ S+ G++
Sbjct: 297 DSTEKPDGFTLVSVLSACASLGSLSQG-EWVHVYIDKHGIEIEGFLATALVDMYSKCGKI 355
Query: 446 QRACEIIR 453
+A E+ R
Sbjct: 356 DKALEVFR 363
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/430 (30%), Positives = 229/430 (53%), Gaps = 15/430 (3%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ A I+A S A +VF+++ +V NS++ A+ + P + +F M
Sbjct: 50 DLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQ 109
Query: 96 ----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGRLC 147
+ ++ ++ C L + + +S NA+I + + G L
Sbjct: 110 RFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLG 169
Query: 148 --DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
DA +LF++M + VS+ M+ G VK G + AR LFD MP+R+ +SW M++G
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVK---AGELRDARRLFDEMPQRDLISWNTMLDGY 226
Query: 206 VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ--IRCRDIASWNIM 263
+A+ELF +MP++N V+ + M+ G+ K G ++ A +F + + +++ +W I+
Sbjct: 227 ARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTII 286
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I GYA+ G +EA L QMV +G++ D +S+ AC LL G + ++++ +
Sbjct: 287 IAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNL 346
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
S+ V NAL+ MY+KCG++ + F + D+VSWNT++ H +A F +
Sbjct: 347 GSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSR 406
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
M G+RPD +TF+++L C AG IDE ++ F M Y + P+ EHY CLVD++ R G
Sbjct: 407 MRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVG 466
Query: 444 QLQRACEIIR 453
+L+ A ++++
Sbjct: 467 RLKEAIKVVQ 476
Score = 181 bits (459), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 193/368 (52%), Gaps = 17/368 (4%)
Query: 34 SYDVYRANLNIAAFSRAGNITA--ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
S D+Y N I +SR G + A ++F+KM +D V+WNSML +G + +R LF
Sbjct: 149 SSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLF 208
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
D MP ++++SWN M+ G + + +AF F MPERN S++ M+ G+ K G + A+
Sbjct: 209 DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARV 268
Query: 152 LFKEMPCP--NVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGL 205
+F +MP P NVV++T++I GY E G + A L D M + + + ++
Sbjct: 269 MFDKMPLPAKNVVTWTIIIAGYA---EKGLLKEADRLVDQMVASGLKFDAAAVISILAAC 325
Query: 206 VENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
E+GL + + + N+ ++ A++ + K G + +A+ +F I +D+ SWN
Sbjct: 326 TESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWN 385
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT-YALVIK 320
M+ G +G G+EA+ LFS+M R G++PD + F+++ +C L+D+G Y++
Sbjct: 386 TMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKV 445
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+ + LV + + G + ++ ++ +P++V W ++ A H A+
Sbjct: 446 YDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKE 505
Query: 380 YFDQMIAV 387
D ++ +
Sbjct: 506 VLDNLVKL 513
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%)
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
IF A L+Q +Q +A +I+ DL + L++ S C + F Q
Sbjct: 18 IFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV 77
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
+P++ N++I A AQ+ Y+A F +M G+ D T+ LL C
Sbjct: 78 QEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC 127
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 214/432 (49%), Gaps = 48/432 (11%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
F + +N I + + G A +VFD+M +++ +WN+M++ Y SG +R +F
Sbjct: 77 FKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVF 136
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIK----- 142
D+MP ++VVSWN MV G Q+ L EA ++ N S+ +++ +K
Sbjct: 137 DSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQ 196
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMI 202
R Q L NVV +ID Y K G + A+ FD M ++ WT +I
Sbjct: 197 LNRQAHGQVLVAGF-LSNVVLSCSIIDAYAKC---GQMESAKRCFDEMTVKDIHIWTTLI 252
Query: 203 NGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+G + G E A +LF MP+KN V+ TA+I G+ +QG
Sbjct: 253 SGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS--------------------- 291
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
G AL+LF +M+ G++P+ F S A AS+A L G++ + +I+
Sbjct: 292 ----------GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQT-SQPDIVSWNTIIAAFAQHVLYYKARSYF 381
+ V ++L+ MYSK GS+ SE F + D V WNT+I+A AQH L +KA
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
D MI V+P+ T + +L+ C +G ++E + F M +GI P EHYACL+D++ R
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 442 AG---QLQRACE 450
AG +L R E
Sbjct: 462 AGCFKELMRKIE 473
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 145/312 (46%), Gaps = 33/312 (10%)
Query: 174 VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMI 233
+K+G I R + R N + +I ++ G +A ++F +M +N+ + M+
Sbjct: 62 LKQGKWIHRHLKI-TGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMV 120
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+G+ K G + A +F + RD+ SWN M+ GYAQ+G EAL + + R+G++ ++
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
F L TAC L RQ + V+ GF S++ ++ +++ Y+KCG + ++ F +
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEM 240
Query: 354 SQPDI-------------------------------VSWNTIIAAFAQHVLYYKARSYFD 382
+ DI VSW +IA + + +A F
Sbjct: 241 TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+MIA+GV+P+ TF S L + + M+ + P + + L+D+ S++
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKS 359
Query: 443 GQLQRACEIIRL 454
G L+ + + R+
Sbjct: 360 GSLEASERVFRI 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ-PDDLIFVSLFTACASLALLDQG 311
R R I ++ +A +A++ + + G++ P DL+ SL C L QG
Sbjct: 7 RKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLL-ASLLQQCGDTKSLKQG 65
Query: 312 RQTYALVIKHGFDS-DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
+ + + GF + ++N L+ MY KCG +D+ F Q ++ SWN +++ + +
Sbjct: 66 KWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVK 125
Query: 371 HVLYYKARSYFDQM 384
+ +AR FD M
Sbjct: 126 SGMLVRARVVFDSM 139
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 130/452 (28%), Positives = 225/452 (49%), Gaps = 53/452 (11%)
Query: 49 RAGNITAARQVFDKMPTKDVVTWN--SMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
RAG + + V D ++ ++ N M +W + +R +FD MP K+ + WN M+
Sbjct: 136 RAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRV---EDARKVFDRMPEKDTILWNTMI 192
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAA----------------------------------- 131
+G +N+M E+ F + +
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGC 252
Query: 132 -SYNAMISGFI----KFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARAL 186
S++ +++GFI K G++ LF+E P++V+Y MI GY G + +L
Sbjct: 253 YSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTS---NGETELSLSL 309
Query: 187 F-DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA----STAMITGFCKQGK 241
F + M + + +++ + +G + + G + N ++ STA+ T + K +
Sbjct: 310 FKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNE 369
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
++ A LF + + + SWN MI+GY QNG E+A++LF +M ++ P+ + + +A
Sbjct: 370 IESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSA 429
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
CA L L G+ + LV F+S + V+ AL+ MY+KCGSI ++ F ++ + V+W
Sbjct: 430 CAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTW 489
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
NT+I+ + H +A + F +M+ G+ P +TFL +L C AG + E +FN M+H
Sbjct: 490 NTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIH 549
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
YG P +HYAC+VD++ RAG LQRA + I
Sbjct: 550 RYGFEPSVKHYACMVDILGRAGHLQRALQFIE 581
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 133/342 (38%), Gaps = 88/342 (25%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
I+ +S+ G I +F + D+V +N+M+ Y +G + S +LF + +
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 100 --------VSWNAMV-----AGCVQNDML-------------------DEAFNYFAAMPE 127
VS + M+ C++++ L + A F PE
Sbjct: 323 STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDG------------- 170
++ S+NAMISG+ + G DA LF+EM PN V+ T ++
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 171 -------------YVKV------KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
YV + G IA AR LFD M ++NEV+W MI+G +G
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 212 EEAWELFGRMPQKNVVASTAMITGFC------KQGKVDEAWTLFQQIRCR-----DIASW 260
+EA +F M + + +T C G V E +F + R + +
Sbjct: 503 QEALNIFYEMLNSGITPTP--VTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY 560
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
M+ + G + AL M ++P ++ +L AC
Sbjct: 561 ACMVDILGRAGHLQRALQFIEAM---SIEPGSSVWETLLGAC 599
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 23 HFLLVFAKH---FSSYDVYRANLNIA---AFSRAGNITAARQVFDKMPTKDVVTWNSMLT 76
H +L++A H S + A+++ A +S+ I +AR++FD+ P K + +WN+M++
Sbjct: 334 HLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMIS 393
Query: 77 AYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLD--EAFNYFAAMPERNA 130
Y +G + + +LF M N V+ +++ C Q L + + + +
Sbjct: 394 GYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 131 ASY--NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFD 188
+ Y A+I + K G + +A+RLF M N V++ MI GY +G A +F
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG---QEALNIFY 510
Query: 189 AMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQK 224
M V++ ++ GL +E E+F M +
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHR 550
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TGMQPDDLIFVSL 298
G + A +F ++ D+ +N+++ G++ N +L++F+ + + T ++P+ +
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
+A + GR + + G DS+L + + +V MY K + D+ F + + D
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDESMNLFN 417
+ WNT+I+ + ++ +Y ++ F +I R D T L +L ++ M + +
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 418 LMV------HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
L HDY + + + S+ G+++ + R
Sbjct: 246 LATKTGCYSHDYVL-------TGFISLYSKCGKIKMGSALFR 280
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 14/191 (7%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
LV + F S +Y + I +++ G+I AR++FD M K+ VTWN+M++ Y G Q
Sbjct: 445 LVRSTDFES-SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQ 503
Query: 86 HSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAM 136
+ +F M + V++ ++ C ++ E F +M R + Y M
Sbjct: 504 EALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACM 563
Query: 137 ISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRN 194
+ + G L A + + M S + G ++ + +AR + LF+ P +
Sbjct: 564 VDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDP--D 621
Query: 195 EVSWTVMINGL 205
V + V+++ +
Sbjct: 622 NVGYHVLLSNI 632
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 212/437 (48%), Gaps = 52/437 (11%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP----MKNVVSWNAMVAGCVQ 111
A VF + +++ WN+M + S P + L+ M + N ++ ++ C +
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 112 NDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVM 167
+ E + + + + ++IS +++ GRL DA ++F + P +VVSYT +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
I GY G I A+ LFD +P ++ VSW MI+G E G Y+EA ELF M + NV
Sbjct: 207 IKGYA---SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVR 263
Query: 228 AS---------------------------------------TAMITGFCKQGKVDEAWTL 248
A+I + K G+++ A L
Sbjct: 264 PDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGL 323
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F+++ +D+ SWN +I GY +EAL LF +M+R+G P+D+ +S+ ACA L +
Sbjct: 324 FERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 309 DQGRQTYALVIKH--GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
D GR + + K G + S+ +L+ MY+KCG I + F + SWN +I
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIF 443
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
FA H + F +M +G++PD ITF+ LLS C +G +D ++F M DY +
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 427 PRSEHYACLVDVMSRAG 443
P+ EHY C++D++ +G
Sbjct: 504 PKLEHYGCMIDLLGHSG 520
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/259 (34%), Positives = 149/259 (57%), Gaps = 11/259 (4%)
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
T +I+ V+NG E+A ++F + P ++VV+ TA+I G+ +G ++ A LF +I +D+
Sbjct: 173 TSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVV 232
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SWN MI+GYA+ G +EAL LF M++T ++PD+ V++ +ACA ++ GRQ + +
Sbjct: 233 SWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWI 292
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
HGF S+L + NAL+ +YSKCG + + F + D++SWNT+I + LY +A
Sbjct: 293 DDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEAL 352
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY------GIPPRSEHY 432
F +M+ G P+ +T LS+L C G ID +H Y G+ S
Sbjct: 353 LLFQEMLRSGETPNDVTMLSILPACAHLGAID-----IGRWIHVYIDKRLKGVTNASSLR 407
Query: 433 ACLVDVMSRAGQLQRACEI 451
L+D+ ++ G ++ A ++
Sbjct: 408 TSLIDMYAKCGDIEAAHQV 426
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 195/431 (45%), Gaps = 63/431 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+Y I+ + + G + A +VFDK P +DVV++ +++ Y G+ ++++ LFD +P
Sbjct: 168 DLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIP 227
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI---------SGFIKFGR- 145
+K+VVSWNAM++G + EA F M + N + + SG I+ GR
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ 287
Query: 146 --LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
L F N+ +ID Y K G + A LF+ +P ++ +SW +I
Sbjct: 288 VHLWIDDHGFGS----NLKIVNALIDLYSKC---GELETACGLFERLPYKDVISWNTLIG 340
Query: 204 GLVENGLYEEAWELF------GRMPQKNVVAS---------------------------- 229
G LY+EA LF G P + S
Sbjct: 341 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGV 400
Query: 230 -------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
T++I + K G ++ A +F I + ++SWN MI G+A +GR + + +LFS+
Sbjct: 401 TNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSR 460
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCG 341
M + G+QPDD+ FV L +AC+ +LD GR + + + + L ++ + G
Sbjct: 461 MRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSG 520
Query: 342 SI-VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
E+ +PD V W +++ A H S+ + +I + G +++ L
Sbjct: 521 LFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG-SYVLLS 579
Query: 401 SVCCRAGKIDE 411
++ AG+ +E
Sbjct: 580 NIYASAGRWNE 590
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 129/414 (31%), Positives = 206/414 (49%), Gaps = 52/414 (12%)
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN-AASYNAMIS------- 138
+R +FD MP +++VSWN +VAG QN M A +M E N S+ ++S
Sbjct: 189 ARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 139 -GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS 197
I G+ + +S T ++D Y K G + AR LFD M RN VS
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNIS-TALVDMYAKC---GSLETARQLFDGMLERNVVS 304
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQ---------------------------------- 223
W MI+ V+N +EA +F +M
Sbjct: 305 WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Query: 224 -----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
+NV ++I+ +CK +VD A ++F +++ R + SWN MI G+AQNGR +ALN
Sbjct: 365 ELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALN 424
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
FSQM ++PD +VS+ TA A L++ + + +V++ D ++ V ALV MY+
Sbjct: 425 YFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYA 484
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
KCG+I+ + L F S+ + +WN +I + H A F++M ++P+G+TFLS
Sbjct: 485 KCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLS 544
Query: 399 LLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
++S C +G ++ + F +M +Y I +HY +VD++ RAG+L A + I
Sbjct: 545 VISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 153/294 (52%), Gaps = 13/294 (4%)
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
++S F ++G + +A R+F+ + V Y M+ G+ KV + + +A F M R ++
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSD---LDKALQFFVRM-RYDD 130
Query: 196 V-----SWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAW 246
V ++T ++ + E+ G + + ++ A T + + K +V+EA
Sbjct: 131 VEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEAR 190
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
+F ++ RD+ SWN ++ GY+QNG AL + M ++P + VS+ A ++L
Sbjct: 191 KVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALR 250
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
L+ G++ + ++ GFDS ++++ ALV MY+KCGS+ + F + ++VSWN++I
Sbjct: 251 LISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMID 310
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
A+ Q+ +A F +M+ GV+P ++ + L C G ++ + L V
Sbjct: 311 AYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSV 364
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 25/251 (9%)
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
+NGLY+E + T +++ FC+ G VDEA +F+ I + ++ M+ G
Sbjct: 62 KNGLYQEHF------------FQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+A+ ++AL F +M ++P F L C A L G++ + L++K GF D
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLD 169
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
L L MY+KC + ++ F + + D+VSWNTI+A ++Q+ + A M
Sbjct: 170 LFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCE 229
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH------YACLVDVMS 440
++P IT +S+L ++ L ++ +G RS LVD+ +
Sbjct: 230 ENLKPSFITIVSVLPAV-------SALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 441 RAGQLQRACEI 451
+ G L+ A ++
Sbjct: 283 KCGSLETARQL 293
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 93/236 (39%), Gaps = 53/236 (22%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
++V NS+++ Y + ++F + + +VSWNAM+ G QN +A NYF+ M
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQM 429
Query: 126 PERNAA----SYNAMISGFIKFGRLCDAQ----RLFKEMPCPNVVSYTVMIDGYVKVKEG 177
R +Y ++I+ + A+ + + NV T ++D Y K
Sbjct: 430 RSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKC--- 486
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST------- 230
G I AR +FD M R+ +W MI+G +G + A ELF M QK +
Sbjct: 487 GAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEM-QKGTIKPNGVTFLSV 545
Query: 231 ----------------------------------AMITGFCKQGKVDEAWTLFQQI 252
AM+ + G+++EAW Q+
Sbjct: 546 ISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM 601
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 124/398 (31%), Positives = 198/398 (49%), Gaps = 47/398 (11%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV NS++ Y+ G + +F + K+VVSWN+M+ G VQ D+A F M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 127 ERNAASYNAMISGFI---------KFGR-LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE 176
+ + + + G + +FGR +C + + N+ M+D Y K
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCS--YIEENRVNVNLTLANAMLDMYTKC-- 280
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF 236
G I A+ LFDAM ++ V+WT M++G + YE A E+ MPQK
Sbjct: 281 -GSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK------------ 327
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIF 295
DI +WN +I+ Y QNG+ EAL +F ++ ++ M+ + +
Sbjct: 328 -------------------DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
VS +ACA + L+ GR ++ + KHG + V +AL+ MYSKCG + S F +
Sbjct: 369 VSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
D+ W+ +I A H +A F +M V+P+G+TF ++ C G +DE+ +L
Sbjct: 429 RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
Query: 416 FNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F+ M +YGI P +HYAC+VDV+ R+G L++A + I
Sbjct: 489 FHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 526
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 156/328 (47%), Gaps = 51/328 (15%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ AN I + G++ +A +VF + KDVV+WNSM+ + G P + LF M
Sbjct: 165 DVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKME 224
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLC 147
++V V+ +++ C + L+ + + E N NAM+ + K G +
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
DA+RLF M + V++T M+DGY ++ AR + ++MP+++ V+W +I+ +
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISED---YEAAREVLNSMPQKDIVAWNALISAYEQ 341
Query: 208 NGLYEEAWELFGRMP-QKNVV--------------------------------------- 227
NG EA +F + QKN+
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
++A+I + K G ++++ +F + RD+ W+ MI G A +G G EA+++F +M
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTY 315
++P+ + F ++F AC+ L+D+ +
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLF 489
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 141/284 (49%), Gaps = 16/284 (5%)
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSW 198
F L A+++F E+P PN ++ +I Y + + A D + N+ ++
Sbjct: 77 FASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDP--VLSIWAFLDMVSESQCYPNKYTF 134
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTLFQQIR 253
+I E L G M K+ V S ++I + G +D A +F I+
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHG-MAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIK 193
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
+D+ SWN MI G+ Q G ++AL LF +M ++ + V + +ACA + L+ GRQ
Sbjct: 194 EKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQ 253
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ + ++ + +L++ NA++ MY+KCGSI D++ F + D V+W T++ +A
Sbjct: 254 VCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISED 313
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
Y AR + M + D + + +L+S + GK +E++ +F+
Sbjct: 314 YEAAREVLNSM----PQKDIVAWNALISAYEQNGKPNEALIVFH 353
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 147/311 (47%), Gaps = 34/311 (10%)
Query: 26 LVFAKHFSSY-DVYRANLNIA-------AFSRAGNITAARQVFDKMPTKDVVTWNSMLTA 77
L F + SY + R N+N+ +++ G+I A+++FD M KD VTW +ML
Sbjct: 248 LEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDG 307
Query: 78 YWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN--A 135
Y S + +R + ++MP K++V+WNA+++ QN +EA F + + N
Sbjct: 308 YAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQIT 367
Query: 136 MIS--------GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
++S G ++ GR + + K N + +I Y K G + ++R +F
Sbjct: 368 LVSTLSACAQVGALELGRWIHSY-IKKHGIRMNFHVTSALIHMYSKC---GDLEKSREVF 423
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITG-FC---KQGKVD 243
+++ +R+ W+ MI GL +G EA ++F +M + NV + T FC G VD
Sbjct: 424 NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD 483
Query: 244 EAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
EA +LF Q+ + + ++ ++G E+A+ M + P ++ +L
Sbjct: 484 EAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM---PIPPSTSVWGAL 540
Query: 299 FTACASLALLD 309
AC A L+
Sbjct: 541 LGACKIHANLN 551
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 244/470 (51%), Gaps = 22/470 (4%)
Query: 1 MLSSIIVSIALKPTPSSTAR-HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQV 59
+LS+++ + ++ P + H H L ++ D N+ I ++ + G + AA ++
Sbjct: 251 ILSTVLSACSILPFLEGGKQIHAHIL----RYGLEMDASLMNVLIDSYVKCGRVIAAHKL 306
Query: 60 FDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAMVAGCVQNDML 115
F+ MP K++++W ++L+ Y + + + LF +M ++ + ++++ C L
Sbjct: 307 FNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHAL 366
Query: 116 DEAFNYFAAMPERNAA--SY--NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGY 171
A + N SY N++I + K L DA+++F +VV + MI+GY
Sbjct: 367 GFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGY 426
Query: 172 VKVKEGGGIARARALFDAMPRR-------NEVSWTVMINGLVENGLYEEAWEL-FGRMPQ 223
++ + A +F M R VS L GL ++ L F
Sbjct: 427 SRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLN 486
Query: 224 KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
++ A +A+I + + ++ +F +++ +D+ WN M GY Q EEALNLF ++
Sbjct: 487 LDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL 546
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI 343
+ +PD+ F ++ TA +LA + G++ + ++K G + + + NAL+ MY+KCGS
Sbjct: 547 QLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSP 606
Query: 344 VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
D+ AF + D+V WN++I+++A H KA ++M++ G+ P+ ITF+ +LS C
Sbjct: 607 EDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSAC 666
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
AG +++ + F LM+ +GI P +EHY C+V ++ RAG+L +A E+I
Sbjct: 667 SHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Score = 161 bits (408), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 129/491 (26%), Positives = 214/491 (43%), Gaps = 130/491 (26%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF---- 91
D Y +N+ I +SRAG + AR+VF+KMP +++V+W++M++A H G + S +F
Sbjct: 78 DTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFW 137
Query: 92 ---DAMPMKNVVSWNAMVAGC-------------------------------------VQ 111
P + ++S + + C ++
Sbjct: 138 RTRKDSPNEYILS--SFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 112 NDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS-------- 163
+ +D A F A+PE++ ++ MISG +K GR + +LF ++ NVV
Sbjct: 196 DGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTV 255
Query: 164 -------------------------------YTVMIDGYVKVKEGGGIARARALFDAMPR 192
V+ID YVK G + A LF+ MP
Sbjct: 256 LSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC---GRVIAAHKLFNGMPN 312
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMIT--------GFCKQ- 239
+N +SWT +++G +N L++EA ELF M + ++ A ++++T GF Q
Sbjct: 313 KNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQV 372
Query: 240 -----------------------GKVD---EAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
K D +A +F D+ +N MI GY++ G
Sbjct: 373 HAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQ 432
Query: 274 ---EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
EALN+F M ++P L FVSL A ASL L +Q + L+ K+G + D+
Sbjct: 433 WELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAG 492
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
+AL+ +YS C + DS L F + D+V WN++ A + Q +A + F ++ R
Sbjct: 493 SALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRER 552
Query: 391 PDGITFLSLLS 401
PD TF ++++
Sbjct: 553 PDEFTFANMVT 563
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 140/302 (46%), Gaps = 50/302 (16%)
Query: 166 VMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEA-------WELF 218
++I+ Y + GG+ AR +F+ MP RN VSW+ M++ +G+YEE+ W
Sbjct: 84 ILINLYSR---AGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTR 140
Query: 219 GRMPQKNVVAS-----------------------------------TAMITGFCKQGKVD 243
P + +++S T +I + K G +D
Sbjct: 141 KDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNID 200
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
A +F + + +W MI+G + GR +L LF Q++ + PD I ++ +AC+
Sbjct: 201 YARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACS 260
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNT 363
L L+ G+Q +A ++++G + D S+ N L+ Y KCG ++ + F +I+SW T
Sbjct: 261 ILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTT 320
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY 423
+++ + Q+ L+ +A F M G++PD S+L+ C + F VH Y
Sbjct: 321 LLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALG-----FGTQVHAY 375
Query: 424 GI 425
I
Sbjct: 376 TI 377
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 92/199 (46%), Gaps = 9/199 (4%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK 97
Y N + +++ G+ A + FD ++DVV WNS++++Y + G + + + + M +
Sbjct: 591 YITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSE 650
Query: 98 ----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDA 149
N +++ +++ C ++++ F M E Y M+S + GRL A
Sbjct: 651 GIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKA 710
Query: 150 QRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
+ L ++MP P + + ++ G K A + ++ S+T++ N
Sbjct: 711 RELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASK 770
Query: 209 GLYEEAWELFGRMPQKNVV 227
G++ EA ++ RM + VV
Sbjct: 771 GMWTEAKKVRERMKVEGVV 789
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 113/354 (31%), Positives = 200/354 (56%), Gaps = 8/354 (2%)
Query: 105 MVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSY 164
M A C + ++ A N F M R+ ++N MI + +FG + +A +LF+EM NV+
Sbjct: 155 MYASCGR---INYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPD 211
Query: 165 TVMIDGYVKV-KEGGGIARARALFDAMPRRNEVSWTVMINGLVE----NGLYEEAWELFG 219
+++ V G + RA+++ + + T ++ LV G + A E F
Sbjct: 212 EMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
Query: 220 RMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNL 279
+M +N+ STAM++G+ K G++D+A +F Q +D+ W MI+ Y ++ +EAL +
Sbjct: 272 KMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRV 331
Query: 280 FSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSK 339
F +M +G++PD + S+ +ACA+L +LD+ + ++ + +G +S+LS+NNAL+ MY+K
Sbjct: 332 FEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAK 391
Query: 340 CGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
CG + + F + + ++VSW+++I A + H A S F +M V P+ +TF+ +
Sbjct: 392 CGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGV 451
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
L C +G ++E +F M +Y I P+ EHY C+VD+ RA L+ A E+I
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIE 505
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 174/374 (46%), Gaps = 52/374 (13%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNA-- 104
++ G I AR VFD+M +DVVTWN+M+ Y G + LF+ M NV+
Sbjct: 156 YASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMIL 215
Query: 105 --MVAGC----------------VQNDM-------------------LDEAFNYFAAMPE 127
+V+ C ++ND+ +D A +F M
Sbjct: 216 CNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
RN AM+SG+ K GRL DAQ +F + ++V +T MI YV E A +F
Sbjct: 276 RNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYV---ESDYPQEALRVF 332
Query: 188 DAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQ 239
+ M + + VS +I+ G+ ++A + + + + + A+I + K
Sbjct: 333 EEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKC 392
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
G +D +F+++ R++ SW+ MI + +G +AL+LF++M + ++P+++ FV +
Sbjct: 393 GGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVL 452
Query: 300 TACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPD 357
C+ L+++G++ +A + ++ L +V ++ + + ++ E+ +
Sbjct: 453 YGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASN 512
Query: 358 IVSWNTIIAAFAQH 371
+V W ++++A H
Sbjct: 513 VVIWGSLMSACRIH 526
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 36/268 (13%)
Query: 213 EAWELFGRMPQKNVVASTAMITGFCKQ----GKVDEAWTLFQQIRCRDIASWNIMITGYA 268
E EL G + + + TGF G+++ A +F ++ RD+ +WN MI Y
Sbjct: 129 EGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYC 188
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
+ G +EA LF +M + + PD++I ++ +AC + R Y +I++ D
Sbjct: 189 RFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTH 248
Query: 329 VNNALVTM-------------------------------YSKCGSIVDSELAFGQTSQPD 357
+ ALVTM YSKCG + D+++ F QT + D
Sbjct: 249 LLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKD 308
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
+V W T+I+A+ + +A F++M G++PD ++ S++S C G +D++ +
Sbjct: 309 LVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVH 367
Query: 418 LMVHDYGIPPRSEHYACLVDVMSRAGQL 445
+H G+ L+++ ++ G L
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGL 395
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 27/310 (8%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ ++ AG + AR+ F KM +++ +M++ Y G ++ +FD K++V W
Sbjct: 254 VTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWT 313
Query: 104 AMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
M++ V++D EA F M + + S ++IS G L A+ + +
Sbjct: 314 TMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVN 373
Query: 160 NVVSY----TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
+ S +I+ Y K GG+ R +F+ MPRRN VSW+ MIN L +G +A
Sbjct: 374 GLESELSINNALINMYAKC---GGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDAL 430
Query: 216 ELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIR-----CRDIASWNIMITG 266
LF RM Q+NV V ++ G G V+E +F + + + M+
Sbjct: 431 SLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDL 490
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+ + EAL + M + + +I+ SL +AC L+ G+ +++ D D
Sbjct: 491 FGRANLLREALEVIESM---PVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
Query: 327 LSVNNALVTM 336
ALV M
Sbjct: 548 ----GALVLM 553
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 139/284 (48%), Gaps = 27/284 (9%)
Query: 28 FAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHS 87
F + S +++ + ++ +S+ G + A+ +FD+ KD+V W +M++AY S +PQ +
Sbjct: 269 FFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEA 328
Query: 88 RALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISG 139
+F+ M +VVS ++++ C +LD+A + + E + NA+I+
Sbjct: 329 LRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINM 388
Query: 140 FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NE 195
+ K G L + +F++MP NVVS++ MI+ + G + A +LF M + NE
Sbjct: 389 YAKCGGLDATRDVFEKMPRRNVVSWSSMINA---LSMHGEASDALSLFARMKQENVEPNE 445
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST-----AMITGFCKQGKVDEAWTLFQ 250
V++ ++ G +GL EE ++F M + + M+ F + + EA + +
Sbjct: 446 VTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIE 505
Query: 251 QIRCRDIASWNIMITGYAQNG---RGEEALNLFSQMVRTGMQPD 291
+ +AS N++I G + GE L F+ ++PD
Sbjct: 506 SM---PVAS-NVVIWGSLMSACRIHGELELGKFAAKRILELEPD 545
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 2/176 (1%)
Query: 279 LFSQMVR-TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
LF Q +R G + D F+ + A + ++ L +G + + + K D V + MY
Sbjct: 97 LFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMY 156
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+ CG I + F + S D+V+WNT+I + + L +A F++M V PD +
Sbjct: 157 ASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILC 216
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+++S C R G + + ++ ++ + + + LV + + AG + A E R
Sbjct: 217 NIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAREFFR 271
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 217/434 (50%), Gaps = 59/434 (13%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER--- 128
NS+L+ Y G + LF M + V+WN M++G VQ+ +++E+ +F M
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 129 -NAASYNAMISGFIKFGRLCDAQRLFKEMPC--------PNVVSYTVMIDGYVKVKEGGG 179
+A ++++++ KF L K++ C ++ + +ID Y K + G
Sbjct: 338 PDAITFSSLLPSVSKFENL----EYCKQIHCYIMRHSISLDIFLTSALIDAYFKCR---G 390
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF--------------------- 218
++ A+ +F + V +T MI+G + NGLY ++ E+F
Sbjct: 391 VSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPV 450
Query: 219 ---------GRMPQKNVVAS---------TAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
GR ++ A+I + K G+++ A+ +F+++ RDI SW
Sbjct: 451 IGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSW 510
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
N MIT AQ+ A+++F QM +G+ D + + +ACA+L G+ + +IK
Sbjct: 511 NSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK 570
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
H SD+ + L+ MY+KCG++ + F + +IVSWN+IIAA H +
Sbjct: 571 HSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCL 630
Query: 381 FDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F +M+ G+RPD ITFL ++S CC G +DE + F M DYGI P+ EHYAC+VD+
Sbjct: 631 FHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLF 690
Query: 440 SRAGQLQRACEIIR 453
RAG+L A E ++
Sbjct: 691 GRAGRLTEAYETVK 704
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/461 (24%), Positives = 193/461 (41%), Gaps = 90/461 (19%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NV 99
I A+ G I ++FD++ KD V WN ML Y G F M M N
Sbjct: 180 IKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNA 239
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKE 155
V+++ +++ C ++D + + + N+++S + K GR DA +LF+
Sbjct: 240 VTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFR- 298
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
M R + V+W MI+G V++GL EE+
Sbjct: 299 ---------------------------------MMSRADTVTWNCMISGYVQSGLMEESL 325
Query: 216 ELF------GRMPQK---------------------------------NVVASTAMITGF 236
F G +P ++ ++A+I +
Sbjct: 326 TFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAY 385
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
K V A +F Q D+ + MI+GY NG ++L +F +V+ + P+++ V
Sbjct: 386 FKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLV 445
Query: 297 SLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP 356
S+ L L GR+ + +IK GFD+ ++ A++ MY+KCG + + F + S+
Sbjct: 446 SILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR 505
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
DIVSWN++I AQ A F QM G+ D ++ + LS C A ES F
Sbjct: 506 DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC--ANLPSES---F 560
Query: 417 NLMVHDYGIPPR--SEHY--ACLVDVMSRAGQLQRACEIIR 453
+H + I S+ Y + L+D+ ++ G L+ A + +
Sbjct: 561 GKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFK 601
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 217/471 (46%), Gaps = 34/471 (7%)
Query: 4 SIIVSIALKPTPSSTARHTH-FLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDK 62
S+++ P + H FL+V + SY R + ++ G+ + ++F +
Sbjct: 39 SLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERI---LGMYAMCGSFSDCGKMFYR 95
Query: 63 MPTK--DVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAMVAGCV--QN-- 112
+ + + WNS+++++ +G + A + M +V ++ +V CV +N
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFK 155
Query: 113 --DMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDG 170
D L + + AS ++I ++++G++ +LF + + V + VM++G
Sbjct: 156 GIDFLSDTVSSLGMDCNEFVAS--SLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNG 213
Query: 171 YVK------VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK 224
Y K V +G + R + N V++ +++ L + +L G +
Sbjct: 214 YAKCGALDSVIKGFSVMRMDQI-----SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVS 268
Query: 225 NV----VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
V ++++ + K G+ D+A LF+ + D +WN MI+GY Q+G EE+L F
Sbjct: 269 GVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
+M+ +G+ PD + F SL + + L+ +Q + +++H D+ + +AL+ Y KC
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKC 388
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
+ ++ F Q + D+V + +I+ + + LY + F ++ V + P+ IT +S+L
Sbjct: 389 RGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
V + L ++ G R ++D+ ++ G++ A EI
Sbjct: 449 PVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEI 498
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/446 (18%), Positives = 177/446 (39%), Gaps = 119/446 (26%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNV 99
++ +S+ G A ++F M D VTWN M++ Y SG + S F M + +
Sbjct: 281 LSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDA 340
Query: 100 VSWNAMVAG---------CVQ-----------------NDMLDEAF---------NYFAA 124
+++++++ C Q + ++D F N F+
Sbjct: 341 ITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ 400
Query: 125 MPERNAASYNAMISGFIKFGRLCDAQRLF----KEMPCPNVVSYTVMI------------ 168
+ + AMISG++ G D+ +F K PN ++ ++
Sbjct: 401 CNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLG 460
Query: 169 ---DGYVKVKEG------------------GGIARARALFDAMPRRNEVSWTVMINGLVE 207
G++ +K+G G + A +F+ + +R+ VSW MI +
Sbjct: 461 RELHGFI-IKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQ 519
Query: 208 NGLYEEAWELFGRM----------------------PQK-----------------NVVA 228
+ A ++F +M P + +V +
Sbjct: 520 SDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYS 579
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV-RTG 287
+ +I + K G + A +F+ ++ ++I SWN +I +G+ +++L LF +MV ++G
Sbjct: 580 ESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSG 639
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
++PD + F+ + ++C + +D+G + + ++ +G +V ++ + G + ++
Sbjct: 640 IRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEA 699
Query: 347 -ELAFGQTSQPDIVSWNTIIAAFAQH 371
E PD W T++ A H
Sbjct: 700 YETVKSMPFPPDAGVWGTLLGACRLH 725
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
KH + DVY + I +++ GN+ AA VF M K++V+WNS++ A + G + S
Sbjct: 570 KHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLC 629
Query: 90 LFDAMPMK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISG 139
LF M K + +++ +++ C +DE +F +M E Y ++
Sbjct: 630 LFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDL 689
Query: 140 FIKFGRLCDAQRLFKEMPCP 159
F + GRL +A K MP P
Sbjct: 690 FGRAGRLTEAYETVKSMPFP 709
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 28/231 (12%)
Query: 39 RANLNIAA---FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
R N+ A +++ G + A ++F+++ +D+V+WNSM+T S P + +F M
Sbjct: 475 RCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMG 534
Query: 96 MKNV----VSWNAMVAGC--VQNDMLDEAFNYFAAMPERNAASYN--AMISGFIKFGRLC 147
+ + VS +A ++ C + ++ +A + F + Y+ +I + K G L
Sbjct: 535 VSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLK 594
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP-----RRNEVSWTVMI 202
A +FK M N+VS+ +I G + + LF M R +++++ +I
Sbjct: 595 AAMNVFKTMKEKNIVSWNSII---AACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEII 651
Query: 203 N-----GLVENGL--YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAW 246
+ G V+ G+ + E +G PQ+ A ++ F + G++ EA+
Sbjct: 652 SSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYA--CVVDLFGRAGRLTEAY 700
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 141/433 (32%), Positives = 230/433 (53%), Gaps = 22/433 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG-FPQHSRALFDAM 94
D+ N I +SR+G+ AR+VFD+M KD+++WNS+L+ G F + +F M
Sbjct: 208 DLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 95 PMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY----NAMISGFIKFGRL 146
+ V VS+ +++ C L A +R S N ++S + K G L
Sbjct: 268 MREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVL 327
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM-PRRNEVSWTVMINGL 205
+ +F +M NVVS+T MI K+ FD + P NEV++ +IN +
Sbjct: 328 EAVKSVFHQMSERNVVSWTTMISSN---KDDAVSIFLNMRFDGVYP--NEVTFVGLINAV 382
Query: 206 VENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
N +E ++ G + V+ + IT + K +++A F+ I R+I SWN
Sbjct: 383 KCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWN 442
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA--SLALLDQGRQTYALVI 319
MI+G+AQNG EAL +F M P++ F S+ A A + QG++ +A ++
Sbjct: 443 AMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL 501
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K G +S V++AL+ MY+K G+I +SE F + SQ + W +II+A++ H + +
Sbjct: 502 KLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMN 561
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F +MI V PD +TFLS+L+ C R G +D+ +FN+M+ Y + P EHY+C+VD++
Sbjct: 562 LFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDML 621
Query: 440 SRAGQLQRACEII 452
RAG+L+ A E++
Sbjct: 622 GRAGRLKEAEELM 634
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 151/298 (50%), Gaps = 24/298 (8%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGY----------VKVKEGGGIARA 183
NA++ + K GR +A +F+ + P+VVS+ ++ G+ V++K G
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAG----- 169
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVD 243
+FDA +S+ V G + GL ++ + + ++V + IT + + G
Sbjct: 170 -VVFDAFTYSTALSFCVGSEGFLL-GLQLQS-TVVKTGLESDLVVGNSFITMYSRSGSFR 226
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGR-GEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
A +F ++ +D+ SWN +++G +Q G G EA+ +F M+R G++ D + F S+ T C
Sbjct: 227 GARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTC 286
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
L RQ + L IK G++S L V N L++ YSKCG + + F Q S+ ++VSW
Sbjct: 287 CHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWT 346
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
T+I++ A S F M GV P+ +TF+ L++ +I E + + L +
Sbjct: 347 TMISSNKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCI 399
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 96/181 (53%), Gaps = 4/181 (2%)
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
V S A++ + K G+ D A +F+ + D+ SWN +++G+ N + ALN +M
Sbjct: 111 VCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKS 167
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
G+ D + + + C G Q + V+K G +SDL V N+ +TMYS+ GS
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLY-YKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
+ F + S D++SWN++++ +Q + ++A F M+ GV D ++F S+++ CC
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC 287
Query: 405 R 405
Sbjct: 288 H 288
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 92/195 (47%), Gaps = 20/195 (10%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSW 102
+++ GNI + +VF++M K+ W S+++AY G + LF M +NV V++
Sbjct: 519 YAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTF 578
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPE-----RNAASYNAMISGFIKFGRLCDAQRLFKEMP 157
+++ C + M+D+ + F M E + Y+ M+ + GRL +A+ L E+P
Sbjct: 579 LSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVP 638
Query: 158 -CPNVVSYTVMIDG---YVKVKEGGGIARARALFDAMPRRNEV--SWTVMINGLVENGLY 211
P M+ + VK G +A AM + E+ S+ M N E +
Sbjct: 639 GGPGESMLQSMLGSCRLHGNVKMGAKVAEL-----AMEMKPELSGSYVQMYNIYAEKEEW 693
Query: 212 EEAWELFGRMPQKNV 226
++A E+ M +KNV
Sbjct: 694 DKAAEIRKAMRKKNV 708
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 276 ALNLFSQMVRTGM---QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
AL++F + ++ G D++ AC L +G Q + GF S + V+NA
Sbjct: 59 ALSIFKENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNA 116
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
++ MY K G ++ F PD+VSWNTI++ F + + A ++ +M + GV D
Sbjct: 117 VMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI---ALNFVVRMKSAGVVFD 173
Query: 393 GITFLSLLSVC 403
T+ + LS C
Sbjct: 174 AFTYSTALSFC 184
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 208/435 (47%), Gaps = 57/435 (13%)
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE 127
+V WNS+L+ Y G + LFD MPM++V+S N + G ++N + F M
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 128 RNAASYNAM--ISGFIKFGRLCDAQRLFKEMPCPNVVSYTV-----MIDGYVKVKEGGGI 180
+ + + C ++ + + + +I Y K G
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKC---GCS 206
Query: 181 ARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP------------------ 222
R +FD M RN ++ T +I+GL+EN L+E+ LF M
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAAC 266
Query: 223 ---------------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
+ + +A++ + K G +++AWT+F+ D S
Sbjct: 267 SGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMT 326
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ----GRQTYAL 317
+++ G AQNG EEA+ F +M++ G++ D ++ +A ++ +D G+Q ++L
Sbjct: 327 VILVGLAQNGSEEEAIQFFIRMLQAGVEID----ANVVSAVLGVSFIDNSLGLGKQLHSL 382
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
VIK F + VNN L+ MYSKCG + DS+ F + + + VSWN++IAAFA+H A
Sbjct: 383 VIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAA 442
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+++M + V+P +TFLSLL C G ID+ L N M +GI PR+EHY C++D
Sbjct: 443 LKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIID 502
Query: 438 VMSRAGQLQRACEII 452
++ RAG L+ A I
Sbjct: 503 MLGRAGLLKEAKSFI 517
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 156/321 (48%), Gaps = 11/321 (3%)
Query: 102 WNAMVAGCVQNDMLD--EAFNYFAAMPERNA-ASYNAMISGFIKFGRLCDAQRLFKEMPC 158
W + C+ ++ E F A RNA +N+++S + K G+L DA +LF EMP
Sbjct: 59 WFPHLGPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPM 118
Query: 159 PNVVSYTVMIDGYVKVK--EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
+V+S ++ G+++ + E G + R L ++ + + E L +
Sbjct: 119 RDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHATLTIVLSVCDTPEFCLVTKMIH 178
Query: 217 LFGRMP--QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
+ K + +IT + K G +F + R++ + +I+G +N E
Sbjct: 179 ALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHE 238
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
+ L LFS M R + P+ + ++S AC+ + +G+Q +AL+ K+G +S+L + +AL+
Sbjct: 239 DGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALM 298
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
MYSKCGSI D+ F T++ D VS I+ AQ+ +A +F +M+ GV D
Sbjct: 299 DMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDAN 358
Query: 395 TFLSLLSVCCRAGKIDESMNL 415
++L V ID S+ L
Sbjct: 359 VVSAVLGVSF----IDNSLGL 375
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 194/384 (50%), Gaps = 34/384 (8%)
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQ----RLFKEMPC 158
N + C LD A + M E N YNA+ GF+ + R+ ++
Sbjct: 809 NQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVS 868
Query: 159 PNVVSYTVMIDG----------------------YVKVKEG--------GGIARARALFD 188
P+ +Y+ ++ +VK++ G I AR +FD
Sbjct: 869 PSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFD 928
Query: 189 AMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTL 248
MP R++++WT M++ + A L +M +KN S +I G+ G +++A +L
Sbjct: 929 EMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESL 988
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F Q+ +DI SW MI GY+QN R EA+ +F +M+ G+ PD++ ++ +ACA L +L
Sbjct: 989 FNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVL 1048
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+ G++ + +++GF D+ + +ALV MYSKCGS+ + L F + ++ WN+II
Sbjct: 1049 EIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGL 1108
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
A H +A F +M V+P+ +TF+S+ + C AG +DE ++ M+ DY I
Sbjct: 1109 AAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSN 1168
Query: 429 SEHYACLVDVMSRAGQLQRACEII 452
EHY +V + S+AG + A E+I
Sbjct: 1169 VEHYGGMVHLFSKAGLIYEALELI 1192
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 173/335 (51%), Gaps = 13/335 (3%)
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS 132
+++ Y +G + +R +FD MP ++ ++W MV+ + +D A + M E+N A+
Sbjct: 909 TLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEAT 968
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR 192
N +I+G++ G L A+ LF +MP +++S+T MI GY + K A A+F M
Sbjct: 969 SNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKR---YREAIAVFYKMME 1025
Query: 193 R----NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDE 244
+EV+ + +I+ G+ E E+ Q +V +A++ + K G ++
Sbjct: 1026 EGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLER 1085
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A +F + +++ WN +I G A +G +EAL +F++M ++P+ + FVS+FTAC
Sbjct: 1086 ALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTH 1145
Query: 305 LALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWN 362
L+D+GR+ Y +++ + S++ +V ++SK G I ++ EL +P+ V W
Sbjct: 1146 AGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWG 1205
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
++ H A F++++ + G FL
Sbjct: 1206 ALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFL 1240
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 132/307 (42%), Gaps = 54/307 (17%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS---------------------- 81
I +S G I AR+VFD+MP +D + W +M++AY
Sbjct: 911 IDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSN 970
Query: 82 ---------GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER---- 128
G + + +LF+ MP+K+++SW M+ G QN EA F M E
Sbjct: 971 CLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIP 1030
Query: 129 NAASYNAMISGFIKFGRLCDAQRL----FKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
+ + + +IS G L + + + +V + ++D Y K G + RA
Sbjct: 1031 DEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKC---GSLERAL 1087
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQG 240
+F +P++N W +I GL +G +EA ++F +M + N V ++ T G
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 241 KVDEAWTLFQQI-----RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
VDE +++ + ++ + M+ +++ G EAL L M +P+ +I+
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM---EFEPNAVIW 1204
Query: 296 VSLFTAC 302
+L C
Sbjct: 1205 GALLDGC 1211
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 10/145 (6%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DVY + + +S+ G++ A VF +P K++ WNS++ GF Q + +F M
Sbjct: 1066 DVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKME 1125
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPE-----RNAASYNAMISGFIKFGRL 146
M+ N V++ ++ C ++DE + +M + N Y M+ F K G +
Sbjct: 1126 MESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLI 1185
Query: 147 CDAQRLFKEMPC-PNVVSYTVMIDG 170
+A L M PN V + ++DG
Sbjct: 1186 YEALELIGNMEFEPNAVIWGALLDG 1210
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 223/439 (50%), Gaps = 29/439 (6%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+DVY A I +SR + AR +FD+MP +D+ +WN+M++ Y SG + + L + +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY----NAMISGFIKFGRLCDAQ 150
+ V+ ++++ C + + + + S N +I + +FGRL D Q
Sbjct: 243 RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQ 302
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR-------NEVSWTVMIN 203
++F M +++S+ +I Y ++ RA +LF M +S +++
Sbjct: 303 KVFDRMYVRDLISWNSIIKAYELNEQP---LRAISLFQEMRLSRIQPDCLTLISLASILS 359
Query: 204 GL--------VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
L V+ + W L +++ A++ + K G VD A +F +
Sbjct: 360 QLGDIRACRSVQGFTLRKGWFL------EDITIGNAVVVMYAKLGLVDSARAVFNWLPNT 413
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQT 314
D+ SWN +I+GYAQNG EA+ +++ M G + + +VS+ AC+ L QG +
Sbjct: 414 DVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKL 473
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ ++K+G D+ V +L MY KCG + D+ F Q + + V WNT+IA H
Sbjct: 474 HGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHG 533
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
KA F +M+ GV+PD ITF++LLS C +G +DE F +M DYGI P +HY C
Sbjct: 534 EKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGC 593
Query: 435 LVDVMSRAGQLQRACEIIR 453
+VD+ RAGQL+ A + I+
Sbjct: 594 MVDMYGRAGQLETALKFIK 612
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 181/365 (49%), Gaps = 29/365 (7%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
KH +++ +N I ++ G + ++VFD+M +D+++WNS++ AY + P + +
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 90 LFDAMPMKNV-------VSWNAMVA--GCVQNDMLDEAFNYFAAMPERNAASYNAMISGF 140
LF M + + +S ++++ G ++ + F + NA++ +
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 394
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV---- 196
K G + A+ +F +P +V+S+ +I GY + G + A +++ M E+
Sbjct: 395 AKLGLVDSARAVFNWLPNTDVISWNTIISGYA---QNGFASEAIEMYNIMEEEGEIAANQ 451
Query: 197 -SWTVMINGLVENGLYEEAWELFGRMPQKN------VVASTAMITGFCKQGKVDEAWTLF 249
+W ++ + G + +L GR+ + VV S A + G C G++++A +LF
Sbjct: 452 GTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKC--GRLEDALSLF 509
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
QI + WN +I + +G GE+A+ LF +M+ G++PD + FV+L +AC+ L+D
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 310 QGRQTYALV-IKHGFDSDLSVNNALVTMYSKCGSIVDSELAF--GQTSQPDIVSWNTIIA 366
+G+ + ++ +G L +V MY + G + ++ L F + QPD W +++
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQL-ETALKFIKSMSLQPDASIWGALLS 628
Query: 367 AFAQH 371
A H
Sbjct: 629 ACRVH 633
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 136/301 (45%), Gaps = 46/301 (15%)
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
C RL NV +++ Y + G +A AR FD + R+ +W +MI+G
Sbjct: 72 CLHARLVVSKQIQNVCISAKLVNLYCYL---GNVALARHTFDHIQNRDVYAWNLMISGYG 128
Query: 207 ENGLYEEAWELF-------GRMPQK------------------------------NVVAS 229
G E F G P +V +
Sbjct: 129 RAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVA 188
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
++I + + V A LF ++ RD+ SWN MI+GY Q+G +EAL L G++
Sbjct: 189 ASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-----SNGLR 243
Query: 290 P-DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
D + VSL +AC ++G ++ IKHG +S+L V+N L+ +Y++ G + D +
Sbjct: 244 AMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQK 303
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
F + D++SWN+II A+ + +A S F +M ++PD +T +SL S+ + G
Sbjct: 304 VFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGD 363
Query: 409 I 409
I
Sbjct: 364 I 364
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 120/234 (51%), Gaps = 18/234 (7%)
Query: 224 KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ- 282
+NV S ++ +C G V A F I+ RD+ +WN+MI+GY + G E + FS
Sbjct: 84 QNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLF 143
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M+ +G+ PD F S+ AC ++ G + + L +K GF D+ V +L+ +YS+ +
Sbjct: 144 MLSSGLTPDYRTFPSVLKACRTVI---DGNKIHCLALKFGFMWDVYVAASLIHLYSRYKA 200
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ ++ + F + D+ SWN +I+ + Q +A + + + A+ D +T +SLLS
Sbjct: 201 VGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSA 256
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPP--RSEHYAC--LVDVMSRAGQLQRACEII 452
C AG + + +H Y I SE + L+D+ + G+L R C+ +
Sbjct: 257 CTEAGDFNRGVT-----IHSYSIKHGLESELFVSNKLIDLYAEFGRL-RDCQKV 304
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 29/289 (10%)
Query: 47 FSRAGNITAARQVFDKMPTK-----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS 101
S+ G+I A R V K D+ N+++ Y G +RA+F+ +P +V+S
Sbjct: 358 LSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVIS 417
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQ----RL 152
WN +++G QN EA + M E N ++ +++ + G L RL
Sbjct: 418 WNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
K +V T + D Y K G + A +LF +PR N V W +I +G E
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKC---GRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGE 534
Query: 213 EAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIM 263
+A LF M + V + +++ G VDE F+ ++ + + M
Sbjct: 535 KAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCM 594
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
+ Y + G+ E AL M +QPD I+ +L +AC +D G+
Sbjct: 595 VDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSACRVHGNVDLGK 640
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 211 bits (538), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 136/438 (31%), Positives = 217/438 (49%), Gaps = 56/438 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+ +++ Y G + + +FD MP +++V+WNAM++G + L + F M
Sbjct: 137 DMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMR 196
Query: 127 ERNAASYN--AMISGFIKFGRLCDAQRLFKEMP--CP------NVVSYTVMIDGYVKVKE 176
+ S N ++ F GR A R K + C ++V T ++D Y K K
Sbjct: 197 RIDGLSPNLSTIVGMFPALGR-AGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSK- 254
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA-------- 228
I AR +FD ++NEV+W+ MI G VEN + +EA E+F +M + VA
Sbjct: 255 --CIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIG 312
Query: 229 ---------------------------------STAMITGFCKQGKVDEAWTLFQQIRCR 255
+I+ + K G + +A+ F +I +
Sbjct: 313 LILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLK 372
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
D+ S+N +ITG N R EE+ LF +M +G++PD + + TAC+ LA L G +
Sbjct: 373 DVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
+ HG+ + S+ NAL+ MY+KCG + ++ F + DIVSWNT++ F H L
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGK 492
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH-DYGIPPRSEHYAC 434
+A S F+ M GV PD +T L++LS C +G +DE LFN M D+ + PR +HY C
Sbjct: 493 EALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNC 552
Query: 435 LVDVMSRAGQLQRACEII 452
+ D+++RAG L A + +
Sbjct: 553 MTDLLARAGYLDEAYDFV 570
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 166/381 (43%), Gaps = 65/381 (17%)
Query: 46 AFSRAGNITAARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS 101
A RAG + + V + D+V +L Y S ++R +FD KN V+
Sbjct: 214 ALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVT 273
Query: 102 WNAMVAGCVQNDMLDEAFN-YFAAMPERNAASY--------------------------- 133
W+AM+ G V+N+M+ EA +F + N A
Sbjct: 274 WSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCY 333
Query: 134 -------------NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV---KVKEG 177
N +IS + K+G LCDA R F E+ +V+SY +I G V + +E
Sbjct: 334 AVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEE- 392
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
+ LF M + G++ + A VV A+ T C
Sbjct: 393 -----SFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSIC 447
Query: 238 --------KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
K GK+D A +F + RDI SWN M+ G+ +G G+EAL+LF+ M TG+
Sbjct: 448 NALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVN 507
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN--NALVTMYSKCGSIVDS- 346
PD++ +++ +AC+ L+D+G+Q + + + F+ ++ N + + ++ G + ++
Sbjct: 508 PDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAY 567
Query: 347 ELAFGQTSQPDIVSWNTIIAA 367
+ +PDI T+++A
Sbjct: 568 DFVNKMPFEPDIRVLGTLLSA 588
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 5/175 (2%)
Query: 241 KVDEAWTLFQQI---RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
+V+ A +F +I R IA W++MI YA N E+AL+L+ +M+ +G++P +
Sbjct: 50 EVELARHVFDEIPHPRINPIA-WDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPF 108
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
+ ACA L +D G+ ++ V F +D+ V ALV Y+KCG + + F + + D
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD 168
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAV-GVRPDGITFLSLLSVCCRAGKIDE 411
+V+WN +I+ F+ H F M + G+ P+ T + + RAG + E
Sbjct: 169 MVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALRE 223
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 123/277 (44%), Gaps = 39/277 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+ N I+ +++ G++ A + F ++ KDV+++NS++T + P+ S LF M
Sbjct: 342 DLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMR 401
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
+ + G + A ++ AA+ ++ ++ G+ +C+A
Sbjct: 402 TSGIRPDITTLLGVLT------ACSHLAALGHGSSCHGYCVVHGYAVNTSICNA------ 449
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
++D Y K G + A+ +FD M +R+ VSW M+ G +GL +EA
Sbjct: 450 -----------LMDMYTKC---GKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEAL 495
Query: 216 ELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRD------IASWNIMIT 265
LF M + V V A+++ G VDE LF + D I +N M
Sbjct: 496 SLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTD 555
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
A+ G +EA + ++M +PD + +L +AC
Sbjct: 556 LLARAGYLDEAYDFVNKM---PFEPDIRVLGTLLSAC 589
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 10/164 (6%)
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFD-SDLSVNNALVTMYSKCGSIVDSELAFGQ 352
+F+SL C L G+ + ++K S +V L +Y+ C + + F +
Sbjct: 1 MFLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDE 60
Query: 353 TSQPDI--VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
P I ++W+ +I A+A + KA + +M+ GVRP T+ +L C ID
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAID 120
Query: 411 ESMNLF-NLMVHDYGIPPRSEHYAC--LVDVMSRAGQLQRACEI 451
+ + ++ D+ ++ Y C LVD ++ G+L+ A ++
Sbjct: 121 DGKLIHSHVNCSDFA----TDMYVCTALVDFYAKCGELEMAIKV 160
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 196/379 (51%), Gaps = 32/379 (8%)
Query: 77 AYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAM 136
AY G +HS ALF ++ + A + N + D+AF + +
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 137 ISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
S +K C + ++ +V+ + + ID YV A L D + +V
Sbjct: 133 FSSLLKS---CSTKS--GKLIHTHVLKFGLGIDPYV----------ATGLVDVYAKGGDV 177
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
A ++F RMP++++V+STAMIT + KQG V+ A LF + RD
Sbjct: 178 V---------------SAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGM-QPDDLIFVSLFTACASLALLDQGRQTY 315
I SWN+MI GYAQ+G +AL LF +++ G +PD++ V+ +AC+ + L+ GR +
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
V ++ V L+ MYSKCGS+ ++ L F T + DIV+WN +IA +A H
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 376 KARSYFDQMIAV-GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
A F++M + G++P ITF+ L C AG ++E + +F M +YGI P+ EHY C
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 435 LVDVMSRAGQLQRACEIIR 453
LV ++ RAGQL+RA E I+
Sbjct: 403 LVSLLGRAGQLKRAYETIK 421
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 139/308 (45%), Gaps = 29/308 (9%)
Query: 14 TPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNS 73
T S HTH L K D Y A + +++ G++ +A++VFD+MP + +V+ +
Sbjct: 142 TKSGKLIHTHVL----KFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTA 197
Query: 74 MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM-----PER 128
M+T Y G + +RALFD+M +++VSWN M+ G Q+ ++A F + P+
Sbjct: 198 MITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKP 257
Query: 129 NAASYNAMISGFIKFGRLCDAQRLFKEMPCP----NVVSYTVMIDGYVKVKEGGGIARAR 184
+ + A +S + G L + + + NV T +ID Y K G + A
Sbjct: 258 DEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC---GSLEEAV 314
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP-----QKNVVASTAMITGFCKQ 239
+F+ PR++ V+W MI G +G ++A LF M Q + +
Sbjct: 315 LVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHA 374
Query: 240 GKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
G V+E +F+ + I + +++ + G+ + A M M D ++
Sbjct: 375 GLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNM---NMDADSVL 431
Query: 295 FVSLFTAC 302
+ S+ +C
Sbjct: 432 WSSVLGSC 439
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 153/538 (28%), Positives = 250/538 (46%), Gaps = 91/538 (16%)
Query: 1 MLSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
+L ++++ +ARH VF DVY N ++ +S+ +VF
Sbjct: 40 VLCKSLINVYFTCKDHCSARH-----VFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVF 94
Query: 61 DKM-----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQ 111
++ D T+ +++ AY G R + + +VV +++V +
Sbjct: 95 KRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAK 154
Query: 112 NDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVM 167
++ + + F MPER+ AS+N +IS F + G A LF M PN VS TV
Sbjct: 155 FNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVA 214
Query: 168 IDGYVKV---KEGGGIAR-----------------------------ARALFDAMPRRNE 195
I ++ + G I R AR +F MPR++
Sbjct: 215 ISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSL 274
Query: 196 VSWTVMINGLVENGLYEEAWELFGRM------PQKNVVASTAM-------------ITGF 236
V+W MI G V G + E+ RM P + + S M I G+
Sbjct: 275 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY 334
Query: 237 C--------------------KQGKVDEAWTLFQQIRCRDIA-SWNIMITGYAQNGRGEE 275
K G+ + A T+F + + +D+A SWN+MI+ Y G +
Sbjct: 335 VIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ-KDVAESWNVMISSYISVGNWFK 393
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
A+ ++ QMV G++PD + F S+ AC+ LA L++G+Q + + + ++D + +AL+
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLD 453
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MYSKCG+ ++ F + D+VSW +I+A+ H +A FD+M G++PDG+T
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
L++LS C AG IDE + F+ M YGI P EHY+C++D++ RAG+L A EII+
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQ 571
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 202/438 (46%), Gaps = 59/438 (13%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-NVVSWNAMVAGCVQNDMLDEAFNYFAA 124
+DVV S++ Y+ +R +F+ ++ +V WN++++G +N M + F
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 125 M-------PERNA-----ASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV 172
+ P+ +Y A+ F+ GR+ + C +VV + ++ Y
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGREFL--GRMIHTLVVKSGYVC-DVVVASSLVGMYA 153
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVA 228
K + +FD MP R+ SW +I+ ++G E+A ELFGRM + N V+
Sbjct: 154 KF---NLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVS 210
Query: 229 STAMITG-----FCKQGK------------VDE------------------AWTLFQQIR 253
T I+ + ++GK +DE A +FQ++
Sbjct: 211 LTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMP 270
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
+ + +WN MI GY G + + + ++M+ G +P S+ AC+ L G+
Sbjct: 271 RKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKF 330
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ VI+ ++D+ VN +L+ +Y KCG +E F +T + SWN +I+++
Sbjct: 331 IHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGN 390
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
++KA +DQM++VGV+PD +TF S+L C + +++ + +L + + + +
Sbjct: 391 WFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQI-HLSISESRLETDELLLS 449
Query: 434 CLVDVMSRAGQLQRACEI 451
L+D+ S+ G + A I
Sbjct: 450 ALLDMYSKCGNEKEAFRI 467
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 137/492 (27%), Positives = 233/492 (47%), Gaps = 77/492 (15%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF---- 91
D Y N+ ++ F++AG ++ AR++F+ MP KDVVT NS+L Y +G+ + + LF
Sbjct: 123 DGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELN 182
Query: 92 ---DAMPMKNVVSWNA--------------MVAGCVQND--MLDEAFNYFAAMPERNAAS 132
DA+ + V+ A ++ G V+ D M N +A + AS
Sbjct: 183 FSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMAS 242
Query: 133 Y-------------NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGG 179
Y +A+ISG+ GR+ +++ LF V+ + MI GY+
Sbjct: 243 YMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIA---NNM 299
Query: 180 IARARALFDAM---PRRNEVSWTVMINGLVENGLYE------------------------ 212
A LF+ M R + + +IN + G E
Sbjct: 300 KMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTL 359
Query: 213 -----------EAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
EA +LF + + + +MI + G++D+A +F++I + + SWN
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWN 419
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
M G++QNG E L F QM + + D++ S+ +ACAS++ L+ G Q +A
Sbjct: 420 SMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIV 479
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
G DSD V+++L+ +Y KCG + F + D V WN++I+ +A + ++A F
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLF 539
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
+M G+RP ITF+ +L+ C G ++E LF M D+G P EH++C+VD+++R
Sbjct: 540 KKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLAR 599
Query: 442 AGQLQRACEIIR 453
AG ++ A ++
Sbjct: 600 AGYVEEAINLVE 611
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 211/431 (48%), Gaps = 37/431 (8%)
Query: 20 RHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYW 79
R T+ LL+ K F S V AN + +SR+G + AR +FD+MP ++ +WN+M+ Y
Sbjct: 46 RQTNGLLL-KKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYM 104
Query: 80 HSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISG 139
+SG S FD MP ++ SWN +V+G + L A F AMPE++ + N+++ G
Sbjct: 105 NSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHG 164
Query: 140 FIKFGRLCDAQRLFKEMP-CPNVVSYTVMIDGYVKVK--EGGGIARARALFDAMPRRNEV 196
+I G +A RLFKE+ + ++ T ++ +++ + G A+ L + +++
Sbjct: 165 YILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKM 224
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+ + ++N + G A + ++ + + + +A+I+G+ G+V+E+ LF + R
Sbjct: 225 N-SSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRC 283
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ WN MI+GY N EAL LF++M R + D ++ AC L L+ G+Q +
Sbjct: 284 VILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHC 342
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGS-------------------------------IVD 345
K G D+ V + L+ MYSKCGS I D
Sbjct: 343 HACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDD 402
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
++ F + ++SWN++ F+Q+ + YF QM + + D ++ S++S C
Sbjct: 403 AKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACAS 462
Query: 406 AGKIDESMNLF 416
++ +F
Sbjct: 463 ISSLELGEQVF 473
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 36/305 (11%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
G + AR LFD MP RN SW MI G + +G + F MP+++ + +++GF
Sbjct: 76 GKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFA 135
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
K G++ A LF + +D+ + N ++ GY NG EEAL LF ++ D + +
Sbjct: 136 KAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTT 192
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM--------------------- 336
+ ACA L L G+Q +A ++ G + D +N++LV +
Sbjct: 193 VLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPD 252
Query: 337 ----------YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
Y+ CG + +S F + S ++ WN++I+ + + + +A F++M
Sbjct: 253 DHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-R 311
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
R D T ++++ C G + E+ + +G+ + L+D+ S+ G
Sbjct: 312 NETREDSRTLAAVINACIGLGFL-ETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPM 370
Query: 447 RACEI 451
AC++
Sbjct: 371 EACKL 375
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 139/303 (45%), Gaps = 25/303 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+ A+ + +S+ G+ A ++F ++ + D + NSM+ Y+ G ++ +F+ +
Sbjct: 352 DIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIE 411
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCDAQR 151
K+++SWN+M G QN E YF M + + S +++IS L ++
Sbjct: 412 NKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQ 471
Query: 152 LFKE-----MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
+F + VVS + +ID Y K G + R +FD M + +EV W MI+G
Sbjct: 472 VFARATIVGLDSDQVVS-SSLIDLYCKC---GFVEHGRRVFDTMVKSDEVPWNSMISGYA 527
Query: 207 ENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR-----DI 257
NG EA +LF +M + + ++T G V+E LF+ ++ D
Sbjct: 528 TNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDK 587
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++ M+ A+ G EEA+NL +M D ++ S+ C + G++
Sbjct: 588 EHFSCMVDLLARAGYVEEAINLVEEM---PFDVDGSMWSSILRGCVANGYKAMGKKAAEK 644
Query: 318 VIK 320
+I+
Sbjct: 645 IIE 647
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLS-VNNALVTMYSKCGSIVDSELAFGQT 353
+V L +C+S RQT L++K GF S + V N L+ MYS+ G + + F +
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
+ SWNT+I + + +FD M DG ++ ++S +AG++ +
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM----PERDGYSWNVVVSGFAKAGELSVAR 144
Query: 414 NLFNLM 419
LFN M
Sbjct: 145 RLFNAM 150
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 235/485 (48%), Gaps = 54/485 (11%)
Query: 18 TARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTA 77
T + H L V K + Y +N + +S+ G ++ AR F +V ++N ++ A
Sbjct: 26 TGKSLHALYV--KSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKA 83
Query: 78 YWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI 137
Y +R LFD +P + VS+N +++G A F M + +
Sbjct: 84 YAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTL 143
Query: 138 SGFIKFGRLCDAQRLFKEMPCPNVV----SYTVMIDGYVKVKEGGGIAR-ARALFDAMPR 192
SG I CD L K++ C +V SY+ + + +V GG+ R A ++F M
Sbjct: 144 SGLI--AACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDE 201
Query: 193 -RNEVSWTVMI-------NGLVENGLYEE----------------------------AWE 216
R+EVSW MI G LY+E +
Sbjct: 202 LRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQ 261
Query: 217 LFGRMPQ----KNVVASTAMITGFCKQGKVD---EAWTLFQQIRCRDIASWNIMITGYAQ 269
G++ + +N + +I + K G D ++ +FQ+I D+ WN MI+GY+
Sbjct: 262 FHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSM 321
Query: 270 NGR-GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD-L 327
N EEA+ F QM R G +PDD FV + +AC++L+ Q +Q + L IK S+ +
Sbjct: 322 NEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRI 381
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
SVNNAL+++Y K G++ D+ F + + + VS+N +I +AQH +A + +M+
Sbjct: 382 SVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDS 441
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G+ P+ ITF+++LS C GK+DE FN M + I P +EHY+C++D++ RAG+L+
Sbjct: 442 GIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEE 501
Query: 448 ACEII 452
A I
Sbjct: 502 AERFI 506
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 92/236 (38%), Gaps = 53/236 (22%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHS---------GFPQ--------------------- 85
+ +VF ++ + D+V WN+M++ Y + F Q
Sbjct: 297 SEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACS 356
Query: 86 -----------HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN 134
H A+ +P + NA+++ ++ L +A F MPE NA S+N
Sbjct: 357 NLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFN 416
Query: 135 AMISGFIKFGRLCDA----QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM 190
MI G+ + G +A QR+ PN +++ ++ G + + F+ M
Sbjct: 417 CMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHC---GKVDEGQEYFNTM 473
Query: 191 PRRNEVS-----WTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
++ ++ MI+ L G EEA MP K + A + G C++ K
Sbjct: 474 KETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHK 529
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 220/426 (51%), Gaps = 19/426 (4%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
I A+S G++ +AR VF+ + KD+V W +++ Y +G+ + S L M M + N
Sbjct: 188 INAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNN 247
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPER--------NAASYNAMISGFIKFGRLCDAQRLFKE 155
++ + AF++ + + + ++ + + G + DA ++F E
Sbjct: 248 YTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNE 307
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALF----DAMPRRNEVSWTVMINGLVE---N 208
MP +VV ++ MI + + G A LF +A NE + + ++NG +
Sbjct: 308 MPKNDVVPWSFMIARFC---QNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 209 GLYEEAWELFGRMP-QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
GL E+ L ++ ++ S A+I + K K+D A LF ++ ++ SWN +I GY
Sbjct: 365 GLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGY 424
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
G G +A ++F + +R + ++ F S ACASLA +D G Q + L IK +
Sbjct: 425 ENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKV 484
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
+V+N+L+ MY+KCG I ++ F + D+ SWN +I+ ++ H L +A D M
Sbjct: 485 AVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDR 544
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
+P+G+TFL +LS C AG ID+ F M+ D+GI P EHY C+V ++ R+GQL +
Sbjct: 545 DCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDK 604
Query: 448 ACEIIR 453
A ++I
Sbjct: 605 AMKLIE 610
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 139/318 (43%), Gaps = 42/318 (13%)
Query: 125 MPERNAASYNAMISGFIKFGRLCDAQ----RLFKEMPCPNVVSYTVMIDGYVKVKEGGGI 180
+P ++ +Y AM+ I+ A+ + K+ C ++ + ++++ YVK G
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVK---AGFD 100
Query: 181 ARARALFDAMPRRNEVSWTVMINGL-------VENGLYEEAWEL-----------FGRMP 222
A LFD MP RN VS+ + G + + L+ E EL F +
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 223 Q-----------------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
+ N A+I + G VD A T+F+ I C+DI W +++
Sbjct: 161 KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
Y +NG E++L L S M G P++ F + A L D + + ++K +
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI 385
D V L+ +Y++ G + D+ F + + D+V W+ +IA F Q+ +A F +M
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 386 AVGVRPDGITFLSLLSVC 403
V P+ T S+L+ C
Sbjct: 341 EAFVVPNEFTLSSILNGC 358
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
++ A+ ++ + K G +A LF ++ R+ S+ + GYA ++ + L+S++
Sbjct: 83 DLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLH 138
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
R G + + +F S SL + ++ ++K G+DS+ V AL+ YS CGS+
Sbjct: 139 REGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVD 198
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
+ F DIV W I++ + ++ + + M G P+ TF + L
Sbjct: 199 SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASI 258
Query: 405 RAGKID 410
G D
Sbjct: 259 GLGAFD 264
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 27/293 (9%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD 61
LSSI+ A+ S H L+V K D+Y +N I +++ + A ++F
Sbjct: 351 LSSILNGCAIGKC-SGLGEQLHGLVV--KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDE 117
++ +K+ V+WN+++ Y + G + ++F V V++++ + C +D
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 118 AFNYFA-AMPERNA---ASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK 173
A+ NA A N++I + K G + AQ +F EM +V S+ +I GY
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY-- 525
Query: 174 VKEGGGIAR-ARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA 228
G+ R A + D M R N +++ +++G GL ++ E F M + + +
Sbjct: 526 --STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIE 583
Query: 229 S-----TAMITGFCKQGKVDEAWTLFQQIRCR-DIASWNIMITGYAQNGRGEE 275
T M+ + G++D+A L + I + W M++ + N EE
Sbjct: 584 PCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA-SMNQNNEE 635
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 217/406 (53%), Gaps = 15/406 (3%)
Query: 59 VFDKMPTKDVVTWNSMLTAYWHSGFPQHS-----RALFDAMPMKNVVSWNAMVAGCVQND 113
VF+++P+ WN ++ Y + + R + + + ++ ++ C N
Sbjct: 65 VFERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNG 124
Query: 114 MLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMID 169
+ + + +++ + + + K L A+++F EMP N VS+T ++
Sbjct: 125 QVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVV 184
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS 229
YVK G + A+++FD MP RN SW +++GLV++G A +LF MP++++++
Sbjct: 185 AYVK---SGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISY 241
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
T+MI G+ K G + A LF++ R D+ +W+ +I GYAQNG+ EA +FS+M ++
Sbjct: 242 TSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVK 301
Query: 290 PDDLIFVSLFTACASLALLD--QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
PD+ I V L +AC+ + + + +Y + F S V AL+ M +KCG + +
Sbjct: 302 PDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVV-PALIDMNAKCGHMDRAA 360
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
F + Q D+VS+ +++ A H +A F++M+ G+ PD + F +L VC ++
Sbjct: 361 KLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSR 420
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
++E + F LM Y I +HY+C+V+++SR G+L+ A E+I+
Sbjct: 421 LVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIK 466
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/336 (28%), Positives = 179/336 (53%), Gaps = 14/336 (4%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+ + ++ +AR+VF +MP ++ V+W +++ AY SG + ++++FD MP +N+ SWNA+V
Sbjct: 155 YGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALV 214
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
G V++ L A F MP+R+ SY +MI G+ K G + A+ LF+E +V +++
Sbjct: 215 DGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSA 274
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV----ENGLYEEAWELFGRMP 222
+I GY + G A +F M +N ++ GL+ + G +E ++ +
Sbjct: 275 LILGYA---QNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLH 331
Query: 223 QK-NVVAS----TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
Q+ N +S A+I K G +D A LF+++ RD+ S+ M+ G A +G G EA+
Sbjct: 332 QRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAI 391
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV-IKHGFDSDLSVNNALVTM 336
LF +MV G+ PD++ F + C L+++G + + L+ K+ + + +V +
Sbjct: 392 RLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNL 451
Query: 337 YSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
S+ G + ++ EL + +W +++ + H
Sbjct: 452 LSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLH 487
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 126/266 (47%), Gaps = 31/266 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N + ++G++ A+++FD+MP +D++++ SM+ Y G +R LF+ +V
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVR 270
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
+W+A++ G QN +EAF F+ M +N ++ G + C F+ C
Sbjct: 271 AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMS---ACSQMGCFE--LCEK 325
Query: 161 VVSY--------------TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
V SY +ID K G + RA LF+ MP+R+ VS+ M+ G+
Sbjct: 326 VDSYLHQRMNKFSSHYVVPALIDMNAKC---GHMDRAAKLFEEMPQRDLVSYCSMMEGMA 382
Query: 207 ENGLYEEAWELFGRMPQKNVVAST---AMITGFCKQGK-VDEAWTLFQQIRCR--DIAS- 259
+G EA LF +M + +V +I C Q + V+E F+ +R + +AS
Sbjct: 383 IHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASP 442
Query: 260 --WNIMITGYAQNGRGEEALNLFSQM 283
++ ++ ++ G+ +EA L M
Sbjct: 443 DHYSCIVNLLSRTGKLKEAYELIKSM 468
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 125/252 (49%), Gaps = 22/252 (8%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
I +++ G++ +AR +F++ DV W++++ Y +G P + +F M KNV
Sbjct: 245 IDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDE 304
Query: 104 AMVAG----CVQN---DMLDEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQRLFK 154
++ G C Q ++ ++ +Y + ++ Y A+I K G + A +LF+
Sbjct: 305 FIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFE 364
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGL 210
EMP ++VSY M++G G G + A LF+ M +EV++TV++ ++ L
Sbjct: 365 EMPQRDLVSYCSMMEGM--AIHGCG-SEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 211 YEEAWELFGRMPQK-NVVAS----TAMITGFCKQGKVDEAWTLFQQIRCRDIAS-WNIMI 264
EE F M +K +++AS + ++ + GK+ EA+ L + + AS W ++
Sbjct: 422 VEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLL 481
Query: 265 TGYAQNGRGEEA 276
G + +G E A
Sbjct: 482 GGCSLHGNTEIA 493
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 209/434 (48%), Gaps = 60/434 (13%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQND-----MLDEAFNYFAAMP 126
N +L AY + LFD MP++N+V+WN ++ G +Q D F Y + +
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFK---EMPC--------PNVVSYTVMIDGYVKVK 175
+ + + G I RLC K ++ C + T ++ Y K
Sbjct: 135 FTDVSLDHVSFMGLI---RLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKC- 190
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP------------- 222
G I AR +F+A+ R+ V W +++ V NG+ +EA+ L M
Sbjct: 191 --GLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTF 248
Query: 223 ------------------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
Q ++ +TA++ + K + +A F+ + R++
Sbjct: 249 SSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVV 308
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SWN MI G+AQNG G EA+ LF QM+ +QPD+L F S+ ++CA + + + +Q A+V
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
K G LSV N+L++ YS+ G++ ++ L F +PD+VSW ++I A A H ++
Sbjct: 369 TKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESL 428
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F+ M+ ++PD ITFL +LS C G + E + F M Y I EHY CL+D+
Sbjct: 429 QMFESMLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDL 487
Query: 439 MSRAGQLQRACEII 452
+ RAG + A +++
Sbjct: 488 LGRAGFIDEASDVL 501
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 207 bits (527), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/318 (36%), Positives = 176/318 (55%), Gaps = 11/318 (3%)
Query: 143 FGRLC------DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
FG LC A ++F EM NVV +T MI+GY+ K+ + AR FD P R+ V
Sbjct: 35 FGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKD---LVSARRYFDLSPERDIV 91
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
W MI+G +E G EA LF +MP ++V++ ++ G+ G ++ +F + R+
Sbjct: 92 LWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERN 151
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTY 315
+ SWN +I GYAQNGR E L F +MV G + P+D + +ACA L D G+ +
Sbjct: 152 VFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVH 211
Query: 316 ALVIKHGFDS-DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
G++ D++V NAL+ MY KCG+I + F + D++SWNT+I A H
Sbjct: 212 KYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHG 271
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
+A + F +M G+ PD +TF+ +L C G +++ + FN M D+ I P EH C
Sbjct: 272 TEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGC 331
Query: 435 LVDVMSRAGQLQRACEII 452
+VD++SRAG L +A E I
Sbjct: 332 VVDLLSRAGFLTQAVEFI 349
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 172/377 (45%), Gaps = 47/377 (12%)
Query: 82 GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFI 141
G + +F M KNVV W +M+ G + N L A YF PER+ +N MISG+I
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 142 KFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
+ G + +A+ LF +MPC +V+S+ +++GY + G + +FD MP RN SW +
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANI---GDMEACERVFDDMPERNVFSWNGL 158
Query: 202 INGLVENGLYEEAWELFGRMPQK------------------------------------- 224
I G +NG E F RM +
Sbjct: 159 IKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLG 218
Query: 225 ----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
+V A+I + K G ++ A +F+ I+ RD+ SWN MI G A +G G EALNLF
Sbjct: 219 YNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLF 278
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSK 339
+M +G+ PD + FV + AC + L++ G + ++ ++ +V + S+
Sbjct: 279 HEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSR 338
Query: 340 CGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
G + + E + D V W T++ A + +++I + R + F+
Sbjct: 339 AGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPR-NPANFVM 397
Query: 399 LLSVCCRAGKIDESMNL 415
L ++ AG+ D++ L
Sbjct: 398 LSNIYGDAGRFDDAARL 414
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 108/243 (44%), Gaps = 42/243 (17%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQ 111
++ +AR+ FD P +D+V WN+M++ Y G +R+LFD MP ++V+SWN ++ G
Sbjct: 74 DLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYAN 133
Query: 112 NDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-----PCPNVVSYTV 166
++ F MPERN S+N +I G+ + GR+ + FK M PN + T+
Sbjct: 134 IGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTL 193
Query: 167 MID---------------------GYVKVK------------EGGGIARARALFDAMPRR 193
++ GY KV + G I A +F + RR
Sbjct: 194 VLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRR 253
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF---CKQ-GKVDEAWTLF 249
+ +SW MINGL +G EA LF M + G CK G V++ F
Sbjct: 254 DLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYF 313
Query: 250 QQI 252
+
Sbjct: 314 NSM 316
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 137/467 (29%), Positives = 221/467 (47%), Gaps = 53/467 (11%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N +A +++ G + A + F +M +DV+ WNS+L AY +G + + L M + +
Sbjct: 219 SNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGI 278
Query: 100 ----VSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCDAQR 151
V+WN ++ G Q D A + M + ++ AMISG I G A
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 152 LFKEMPCPNVVSYTVMIDGYVK------------------VKEG---------------- 177
+F++M VV V I V VK G
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 178 --GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTA 231
G + AR +FD++ ++ +W MI G + G +A+ELF RM + N++
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458
Query: 232 MITGFCKQGKVDEAWTLFQQIRC-----RDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
MI+G+ K G EA LFQ++ R+ A+WN++I GY QNG+ +EAL LF +M +
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFS 518
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
P+ + +SL ACA+L R+ + V++ D+ +V NAL Y+K G I S
Sbjct: 519 RFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYS 578
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F DI++WN++I + H Y A + F+QM G+ P+ T S++
Sbjct: 579 RTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLM 638
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G +DE +F + +DY I P EH + +V + RA +L+ A + I+
Sbjct: 639 GNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQ 685
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 126/236 (53%), Gaps = 1/236 (0%)
Query: 218 FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
FG + +V T +++ + K G + +A +F +R R++ +W+ MI Y++ R E
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVA 166
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
LF M++ G+ PDD +F + CA+ ++ G+ +++VIK G S L V+N+++ +Y
Sbjct: 167 KLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVY 226
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+KCG + + F + + D+++WN+++ A+ Q+ + +A +M G+ P +T+
Sbjct: 227 AKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWN 286
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
L+ + GK D +M+L M +GI + ++ + G +A ++ R
Sbjct: 287 ILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNGMRYQALDMFR 341
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 104/461 (22%), Positives = 187/461 (40%), Gaps = 125/461 (27%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
F+ DV+ ++ +++ G I AR+VFD M +++ TW++M+ AY + LF
Sbjct: 110 FTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 92 DAMPMKNVVS----WNAMVAGC--------------------------VQNDM------- 114
M V+ + ++ GC V N +
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 115 --LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMI 168
LD A +F M ER+ ++N+++ + + G+ +A L KEM P +V++ ++I
Sbjct: 230 GELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILI 289
Query: 169 DGYVKVKEGGGIARARALFDAMPRRNE-------VSWTVMINGLVENGLYEEAWELFGRM 221
GY + + + A D M + +WT MI+GL+ NG+ +A ++F +M
Sbjct: 290 GGYNQ------LGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKM 343
Query: 222 -------------------------PQKNVVASTAMITGF--------------CKQGKV 242
Q + V S A+ GF K GK+
Sbjct: 344 FLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKL 403
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
++A +F ++ +D+ +WN MITGY Q G +A LF++M ++P+ + + ++ +
Sbjct: 404 EDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS-- 461
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
+ G + A+ + + D V Q + +WN
Sbjct: 462 ---GYIKNGDEGEAMDLFQRMEKDGKV-------------------------QRNTATWN 493
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
IIA + Q+ +A F +M P+ +T LSLL C
Sbjct: 494 LIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPAC 534
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 120/408 (29%), Positives = 217/408 (53%), Gaps = 14/408 (3%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D Y N+ + + + ++ +AR+VFD++ + WN M++ YW G + + LFD MP
Sbjct: 135 DPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMP 194
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
+VVSW M+ G + L+ A YF MPE++ S+NAM+SG+ + G DA RLF +
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 156 M----PCPNVVSYTVMIDGYVKVKEGGGIARA--RALFDAMPRRNEVSWTVMINGLVENG 209
M PN ++ ++I + + R+ + + + R N T +++ +
Sbjct: 255 MLRLGVRPNETTWVIVISA-CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 210 LYEEAWELFGRM-PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
+ A +F + Q+N+V AMI+G+ + G + A LF + R++ SWN +I GYA
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 269 QNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
NG+ A+ F M+ G +PD++ +S+ +AC +A L+ G + K+ +
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLND 433
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
S +L+ MY++ G++ +++ F + + D+VS+NT+ AFA + + + +M
Sbjct: 434 SGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDE 493
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
G+ PD +T+ S+L+ C RAG + E +F + + P ++HYAC+
Sbjct: 494 GIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRN-----PLADHYACM 536
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 212/459 (46%), Gaps = 74/459 (16%)
Query: 46 AFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGF----------PQHSRALFDAMP 95
F + I A VF+ +P + +YW S ++R +FD++
Sbjct: 18 TFPQLNQIHAQLIVFNSLPRQ----------SYWASRIISCCTRLRAPSYYTRLIFDSVT 67
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYF------AAMPERNAASYNAMISGFIKFGRLCDA 149
NV N+M + DM ++ + MP+ A S+ +I +FG L A
Sbjct: 68 FPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPD--AFSFPVVIKSAGRFGILFQA 125
Query: 150 --QRL--FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
++L FK+ NV+ +D YVK + + AR +FD + +R W VMI+G
Sbjct: 126 LVEKLGFFKDPYVRNVI-----MDMYVKHE---SVESARKVFDQISQRKGSDWNVMISGY 177
Query: 206 VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
+ G EEA +LF MP+ +VV+ T MITGF K ++ A F ++ + + SWN M++
Sbjct: 178 WKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLS 237
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA----------LLDQGRQTY 315
GYAQNG E+AL LF+ M+R G++P++ +V + +AC+ A L+D+ R
Sbjct: 238 GYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRL 297
Query: 316 ALVIKH----------------------GFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+K G +L NA+++ Y++ G + + F
Sbjct: 298 NCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTM 357
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDES 412
+ ++VSWN++IA +A + A +F+ MI G +PD +T +S+LS C ++
Sbjct: 358 PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELG 417
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ + + I Y L+ + +R G L A +
Sbjct: 418 DCIVDY-IRKNQIKLNDSGYRSLIFMYARGGNLWEAKRV 455
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 207/391 (52%), Gaps = 44/391 (11%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
N+++ Y G H+ +FD MP ++ ++W +++ Q ++ + + F+++ +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 132 S-----YNAMIS-----GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
++A++ G I GR + E VV + ++D Y K G +
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSS-LVDMYAKC---GLLN 157
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
A+A+FD++ +N +SWT M++G ++G EEA ELF +P KN+ + TA+I+GF + GK
Sbjct: 158 SAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGK 217
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
EA+++F ++R E +++ D L+ S+ A
Sbjct: 218 GLEAFSVFTEMR--------------------RERVDIL----------DPLVLSSIVGA 247
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
CA+LA GRQ + LVI GFDS + ++NAL+ MY+KC ++ ++ F + D+VSW
Sbjct: 248 CANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSW 307
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
++I AQH KA + +D M++ GV+P+ +TF+ L+ C G +++ LF M
Sbjct: 308 TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTK 367
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
DYGI P +HY CL+D++ R+G L A +I
Sbjct: 368 DYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 153/366 (41%), Gaps = 68/366 (18%)
Query: 44 IAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+ A + G+I RQV D V +S++ Y G ++A+FD++ +KN
Sbjct: 112 VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNT 171
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM--- 156
+SW AMV+G ++ +EA F +P +N S+ A+ISGF++ G+ +A +F EM
Sbjct: 172 ISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRE 231
Query: 157 ---------------PCPNVVS----------------------YTVMIDGYVKVKEGGG 179
C N+ + +ID Y K +
Sbjct: 232 RVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSD--- 288
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF--- 236
+ A+ +F M R+ VSWT +I G+ ++G E+A L+ M V + G
Sbjct: 289 VIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYA 348
Query: 237 CKQ-GKVDEAWTLFQQIRCRD------IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
C G V++ LFQ + +D + + ++ ++G +EA NL M
Sbjct: 349 CSHVGFVEKGRELFQSM-TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM---PFP 404
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
PD+ + +L +AC QGR + I S + + + Y +I S
Sbjct: 405 PDEPTWAALLSACKR-----QGRGQMGIRIADHLVSSFKLKDP--STYILLSNIYASASL 457
Query: 350 FGQTSQ 355
+G+ S+
Sbjct: 458 WGKVSE 463
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 98/192 (51%), Gaps = 5/192 (2%)
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQ-NGRGEEALNLFSQMVRTG 287
+ ++ + K G A +F ++ RD +W ++T Q N G+ S +G
Sbjct: 41 ANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSG 100
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
++PDD +F +L ACA+L +D GRQ + I + +D V ++LV MY+KCG + ++
Sbjct: 101 LRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
F + +SW +++ +A+ +A F +++ V + ++ +L+S ++G
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELF-RILPV---KNLYSWTALISGFVQSG 216
Query: 408 KIDESMNLFNLM 419
K E+ ++F M
Sbjct: 217 KGLEAFSVFTEM 228
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 12/168 (7%)
Query: 1 MLSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
+LSSI+ + A S R H L V A F S V+ +N I +++ ++ AA+ +F
Sbjct: 240 VLSSIVGACA-NLAASIAGRQVHGL-VIALGFDSC-VFISNALIDMYAKCSDVIAAKDIF 296
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLD 116
+M +DVV+W S++ G + + AL+D M V V++ ++ C ++
Sbjct: 297 SRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVE 356
Query: 117 EAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
+ F +M + + Y ++ + G L +A+ L MP P
Sbjct: 357 KGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFP 404
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 4/149 (2%)
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
CA L + +A ++K G + N LV +Y KCG+ + F + D ++W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 362 NTIIAAFAQHVLYYKA-RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF-NLM 419
+++ A Q L K + + G+RPD F +L+ C G ID + + +
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFI 132
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
V +Y + + LVD+ ++ G L A
Sbjct: 133 VSEYANDEVVK--SSLVDMYAKCGLLNSA 159
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/501 (28%), Positives = 240/501 (47%), Gaps = 74/501 (14%)
Query: 5 IIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMP 64
I++ + +KP+P S F+ VF S + +AN+ + G+
Sbjct: 204 IMMRMEVKPSPVS------FVNVFPAVSISRSIKKANVFYGLMLKLGD----------EY 247
Query: 65 TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYF-A 123
KD+ +S ++ Y G + SR +FD+ +N+ WN M+ VQND L E+ F
Sbjct: 248 VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 307
Query: 124 AMPERNAASYN-------AMISGF--IKFGRLCDA--QRLFKEMPCPNVVSYTVMIDGYV 172
A+ + S + +S ++ GR + F+E+P V S VM Y
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVM---YS 364
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVA 228
+ G + ++ +F +M R+ VSW MI+ V+NGL +E L M ++ + +
Sbjct: 365 RC---GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYIT 421
Query: 229 STAMITGFC-----KQGKVDEAWTLFQQIRC----------------------------- 254
TA+++ + GK A+ + Q I+
Sbjct: 422 VTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGY 481
Query: 255 --RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
RD A+WN MI+GY QNG E+ +F +M+ ++P+ + S+ AC+ + +D G+
Sbjct: 482 AERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGK 541
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
Q + I+ D ++ V +ALV MYSK G+I +E F QT + + V++ T+I + QH
Sbjct: 542 QLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHG 601
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
+ +A S F M G++PD ITF+++LS C +G IDE + +F M Y I P SEHY
Sbjct: 602 MGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHY 661
Query: 433 ACLVDVMSRAGQLQRACEIIR 453
C+ D++ R G++ A E ++
Sbjct: 662 CCITDMLGRVGRVNEAYEFVK 682
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/532 (24%), Positives = 222/532 (41%), Gaps = 129/532 (24%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKN- 98
++ + GN ARQ+FD +P V WN+++ + + P + + M P N
Sbjct: 46 LSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNC 105
Query: 99 -VVSWNAMVAGC--------------------------VQNDMLD---------EAFNY- 121
++++ + C V N +++ + F Y
Sbjct: 106 DAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYD 165
Query: 122 -----FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM------PCP----NV----- 161
F M +N ++N +IS ++K GR +A R F M P P NV
Sbjct: 166 VVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
Query: 162 ---------VSYTVMI---DGYVK-----------VKEGGGIARARALFDAMPRRNEVSW 198
V Y +M+ D YVK E G I +R +FD+ RN W
Sbjct: 226 ISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVW 285
Query: 199 TVMINGLVENGLYEEAWELF-------------------------------GR----MPQ 223
MI V+N E+ ELF GR
Sbjct: 286 NTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVS 345
Query: 224 KN-----VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
KN +V +++ + + G V +++ +F +R RD+ SWN MI+ + QNG +E L
Sbjct: 346 KNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLM 405
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
L +M + G + D + +L +A ++L + G+QT+A +I+ G + +N+ L+ MYS
Sbjct: 406 LVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYS 464
Query: 339 KCGSIVDSELAFGQT--SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
K G I S+ F + ++ D +WN++I+ + Q+ K F +M+ +RP+ +T
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTV 524
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
S+L C + G +D L + Y + + LVD+ S+AG ++ A
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYA 575
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 173/384 (45%), Gaps = 55/384 (14%)
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER---- 128
S L+ G PQ +R LFDA+P V WN ++ G + N++ EA +++ M +
Sbjct: 44 SRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFT 103
Query: 129 --NAASYNAMISGFIKFGRLCDAQ----RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR 182
+A +Y++ + + L + L + + + V + +++ YV
Sbjct: 104 NCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFE 163
Query: 183 ---ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ---------------- 223
R +FD M R+N V+W +I+ V+ G EA FG M +
Sbjct: 164 YDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPA 223
Query: 224 -------------------------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
K++ ++ I+ + + G ++ + +F R+I
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIE 283
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYAL 317
WN MI Y QN E++ LF + + + + D++ ++ +A ++L ++ GRQ +
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
V K+ + + + N+L+ MYS+CGS+ S F + D+VSWNT+I+AF Q+ L +
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 378 RSYFDQMIAVGVRPDGITFLSLLS 401
+M G + D IT +LLS
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLS 427
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 192/358 (53%), Gaps = 12/358 (3%)
Query: 105 MVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-----PCP 159
MV C + + +D A F + N YN++I + CD R++K++ P
Sbjct: 48 MVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP 107
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRRNEVSWTVMINGLVENGLYEEAW 215
+ ++ M + G + + + PR + V+ +I+ ++ +A
Sbjct: 108 DRFTFPFMFKSCASL---GSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAH 164
Query: 216 ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEE 275
++F M +++V++ ++++G+ + G++ +A LF + + I SW MI+GY G E
Sbjct: 165 KVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVE 224
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
A++ F +M G++PD++ +S+ +CA L L+ G+ + + GF V NAL+
Sbjct: 225 AMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIE 284
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MYSKCG I + FGQ D++SW+T+I+ +A H + A F++M V+P+GIT
Sbjct: 285 MYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
FL LLS C G E + F++M DY I P+ EHY CL+DV++RAG+L+RA EI +
Sbjct: 345 FLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITK 402
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 167/364 (45%), Gaps = 57/364 (15%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSG--------FPQHSRALF---DAMPMKNVVSWNA 104
A ++F+++ +V +NS++ AY H+ + Q R F D + A
Sbjct: 61 ATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA 120
Query: 105 MVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSY 164
+ C + F P + + NA+I ++KF L DA ++F EM +V+S+
Sbjct: 121 SLGSCYLGKQVHGHLCKFG--PRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISW 178
Query: 165 TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM--- 221
++ GY ++ G + +A+ LF M + VSWT MI+G G Y EA + F M
Sbjct: 179 NSLLSGYARL---GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLA 235
Query: 222 ---PQK----NVVASTAMI---------------------TGFC--------KQGKVDEA 245
P + +V+ S A + TG C K G + +A
Sbjct: 236 GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQA 295
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
LF Q+ +D+ SW+ MI+GYA +G A+ F++M R ++P+ + F+ L +AC+ +
Sbjct: 296 IQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHV 355
Query: 306 ALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNT 363
+ +G + + ++ + + + + L+ + ++ G + + E+ +PD W +
Sbjct: 356 GMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGS 415
Query: 364 IIAA 367
++++
Sbjct: 416 LLSS 419
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 234/471 (49%), Gaps = 33/471 (7%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT 65
I+ + + S H L+ K S ++ +N I + + A +VFD MP
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLL--KSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPE 69
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNY 121
++VV+W+++++ + +G + S +LF M + N +++ + C + L++
Sbjct: 70 RNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQI 129
Query: 122 --------FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK 173
F M E N+++ + K GR+ +A+++F+ + +++S+ MI G+V
Sbjct: 130 HGFCLKIGFEMMVEVG----NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 174 VKEGGGIARARALFDAM------PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV- 226
G ++A F M R +E + T ++ G+ ++ G + +
Sbjct: 186 AGYG---SKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 227 VASTAMITG-----FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
S+A ITG + K G + A F QI+ + + SW+ +I GYAQ G EA+ LF
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
++ Q D S+ A ALL QG+Q AL +K + SV N++V MY KCG
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ ++E F + D++SW +I + +H L K+ F +M+ + PD + +L++LS
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C +G I E LF+ ++ +GI PR EHYAC+VD++ RAG+L+ A +I
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLI 473
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 73/159 (45%), Gaps = 1/159 (0%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
VS+ C L DQG Q + ++K G +L +N L+ MY KC + + F
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
+ ++VSW+ +++ + + S F +M G+ P+ TF + L C +++ +
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 415 LFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ + G E LVD+ S+ G++ A ++ R
Sbjct: 129 IHGFCL-KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFR 166
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/400 (33%), Positives = 208/400 (52%), Gaps = 17/400 (4%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
+V NS+L Y G P ++ +FD M ++++ SWNAM+A +Q +D A F M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARAL 186
ER+ ++N+MISGF + G A +F +M +++S D + A L
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS----PDRFTLASVLSACANLEKL 295
Query: 187 FDAMPRRNEVSWTVM-INGLVENGL---------YEEAWELFGRMPQKN--VVASTAMIT 234
+ + T I+G+V N L E A L + K+ + TA++
Sbjct: 296 CIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLD 355
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
G+ K G +++A +F ++ RD+ +W MI GY Q+G EA+NLF MV G +P+
Sbjct: 356 GYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYT 415
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
++ + +SLA L G+Q + +K G +SV+NAL+TMY+K G+I + AF
Sbjct: 416 LAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIR 475
Query: 355 -QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
+ D VSW ++I A AQH +A F+ M+ G+RPD IT++ + S C AG +++
Sbjct: 476 CERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGR 535
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F++M I P HYAC+VD+ RAG LQ A E I
Sbjct: 536 QYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIE 575
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 178/369 (48%), Gaps = 43/369 (11%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
N+++ Y +G+ H+R LFD MP++ SWN +++ + +D +F +P+R++
Sbjct: 53 NNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSV 112
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEM------PCPNVVSYTVMIDGYVKVKEGGGIARARA 185
S+ MI G+ G+ A R+ +M P ++ + + E G + +
Sbjct: 113 SWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETG--KKVHS 170
Query: 186 LFDAMPRRNEVSWT-VMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDE 244
+ R VS + ++N + G A +F RM +++ + AMI + G++D
Sbjct: 171 FIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDL 230
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACA 303
A F+Q+ RDI +WN MI+G+ Q G AL++FS+M+R + PD S+ +ACA
Sbjct: 231 AMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACA 290
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG---------------------- 341
+L L G+Q ++ ++ GFD V NAL++MYS+CG
Sbjct: 291 NLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGF 350
Query: 342 -SIVDSELAFGQTSQP----------DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
+++D + G +Q D+V+W +I + QH Y +A + F M+ G R
Sbjct: 351 TALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQR 410
Query: 391 PDGITFLSL 399
P+ T ++
Sbjct: 411 PNSYTLAAM 419
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/458 (25%), Positives = 209/458 (45%), Gaps = 98/458 (21%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD 61
L++++ S+A T + H +V + V + LN+ +++ G+ A+ VFD
Sbjct: 149 LTNVLASVA-ATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNM--YAKCGDPMMAKFVFD 205
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
+M +D+ +WN+M+ + G + A F+ M +++V+WN+M++G Q A +
Sbjct: 206 RMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDI 265
Query: 122 FAAM-------PER---------------------------------NAASYNAMISGFI 141
F+ M P+R + NA+IS +
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 142 KFGRLCDAQRLFKEMPCPN--VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT 199
+ G + A+RL ++ + + +T ++DGY+K+ G + +A+ +F ++ R+ V+WT
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL---GDMNQAKNIFVSLKDRDVVAWT 382
Query: 200 VMINGLVENGLYEEAWELF------GRMPQKNVVA------------------------- 228
MI G ++G Y EA LF G+ P +A
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKS 442
Query: 229 --------STAMITGFCKQGKVDEAWTLFQQIRC-RDIASWNIMITGYAQNGRGEEALNL 279
S A+IT + K G + A F IRC RD SW MI AQ+G EEAL L
Sbjct: 443 GEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALEL 502
Query: 280 FSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD-----LSVNNALV 334
F M+ G++PD + +V +F+AC L++QGRQ + ++ D D LS +V
Sbjct: 503 FETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMK----DVDKIIPTLSHYACMV 558
Query: 335 TMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
++ + G + ++ E +PD+V+W ++++A H
Sbjct: 559 DLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 126/249 (50%), Gaps = 7/249 (2%)
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
++N + G A +LF MP + + +++ + K+G +D F Q+ RD SW
Sbjct: 55 LMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSW 114
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
MI GY G+ +A+ + MV+ G++P ++ + A+ ++ G++ ++ ++K
Sbjct: 115 TTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK 174
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
G ++SV+N+L+ MY+KCG + ++ F + DI SWN +IA Q A +
Sbjct: 175 LGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQ 234
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
F+QM D +T+ S++S + G ++++F+ M+ D + P L V+S
Sbjct: 235 FEQM----AERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDR---FTLASVLS 287
Query: 441 RAGQLQRAC 449
L++ C
Sbjct: 288 ACANLEKLC 296
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 99/205 (48%), Gaps = 15/205 (7%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMP-TKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
Y V +N I +++AGNIT+A + FD + +D V+W SM+ A G + + LF+
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 94 MPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNA-----ASYNAMISGFIKFG 144
M M+ + +++ + + C ++++ YF M + + + Y M+ F + G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 145 RLCDAQRLFKEMPC-PNVVSYTVMIDG--YVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
L +AQ ++MP P+VV++ ++ K + G +A R L + N +++ +
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLL--LEPENSGAYSAL 623
Query: 202 INGLVENGLYEEAWELFGRMPQKNV 226
N G +EEA ++ M V
Sbjct: 624 ANLYSACGKWEEAAKIRKSMKDGRV 648
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 131/417 (31%), Positives = 203/417 (48%), Gaps = 44/417 (10%)
Query: 46 AFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN-- 103
A S + + AR++ P D +N+++ Y S P +S A+F M K V +
Sbjct: 48 AISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSF 107
Query: 104 --AMVAGCVQN-DMLDEAFNYFAAMPERNAASY----NAMISGFIKFGRLCDAQRLFKEM 156
A V V+N L F + S+ +I + G + A+++F EM
Sbjct: 108 SFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEM 167
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
PN+V++ +I + G +A AR +FD M RN SW V
Sbjct: 168 HQPNLVAWNAVITACFR---GNDVAGAREIFDKMLVRNHTSWNV---------------- 208
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
M+ G+ K G+++ A +F ++ RD SW+ MI G A NG E+
Sbjct: 209 ---------------MLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNES 253
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
F ++ R GM P+++ + +AC+ + G+ + V K G+ +SVNNAL+ M
Sbjct: 254 FLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDM 313
Query: 337 YSKCGSIVDSELAF-GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
YS+CG++ + L F G + IVSW ++IA A H +A F++M A GV PDGI+
Sbjct: 314 YSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGIS 373
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
F+SLL C AG I+E + F+ M Y I P EHY C+VD+ R+G+LQ+A + I
Sbjct: 374 FISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFI 430
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 153/334 (45%), Gaps = 54/334 (16%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
KH ++ I + G + AR+VFD+M ++V WN+++TA + +R
Sbjct: 134 KHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGARE 193
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
+FD M ++N SWN M+AG ++ L+ A F+ MP R+ S++ MI G G ++
Sbjct: 194 IFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNES 253
Query: 150 QRLFKEMP----CPNVVSYT---------------VMIDGYVKVKEG------------- 177
F+E+ PN VS T ++ G+V+ K G
Sbjct: 254 FLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVE-KAGYSWIVSVNNALID 312
Query: 178 -----GGIARARALFDAM-PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----V 227
G + AR +F+ M +R VSWT MI GL +G EEA LF M V +
Sbjct: 313 MYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGI 372
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIR-----CRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+ +++ G ++E F +++ +I + M+ Y ++G+ ++A + Q
Sbjct: 373 SFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQ 432
Query: 283 MVRTGMQPDDLIFVSLFTACAS---LALLDQGRQ 313
M + P +++ +L AC+S + L +Q +Q
Sbjct: 433 M---PIPPTAIVWRTLLGACSSHGNIELAEQVKQ 463
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 201 bits (511), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 231/507 (45%), Gaps = 97/507 (19%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPT---KDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
ANL I+ ++R G + AR VF+ + D+ WNS+L A G +++ L+ M
Sbjct: 93 ANL-ISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQ 151
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMP--------ERNAASYNAMISGFIKFGRLCD 148
+ + ++ ++ F A + N N +++ + K GR+ D
Sbjct: 152 RGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGD 211
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMING 204
A LF EMP N +S+ VMI G+ + + A +F+ M R +EV+WT +++
Sbjct: 212 AYNLFVEMPVRNRMSWNVMIKGFSQEYD---CESAVKIFEWMQREEFKPDEVTWTSVLSC 268
Query: 205 LVENGLYEEAWELFGRMP---------------------------------------QKN 225
+ G +E+ + F M ++
Sbjct: 269 HSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEY 328
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS---- 281
+ + A+I + KQGKV +A LF+QIR + I SWN +IT + G+ +EAL+LFS
Sbjct: 329 LPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEE 388
Query: 282 -----------------------------------QMVRTGMQPDDLIFVSLFTACASLA 306
QM + + + + + + CA L
Sbjct: 389 MNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELP 448
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
L+ GR+ + VI+ ++ V NALV MY+KCG + + L F D++SWN+II
Sbjct: 449 ALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIK 508
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
+ H KA S FD+MI+ G PDGI +++LS C AG +++ +F M +G+
Sbjct: 509 GYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLE 568
Query: 427 PRSEHYACLVDVMSRAGQLQRACEIIR 453
P+ EHYAC+VD++ R G L+ A EI++
Sbjct: 569 PQQEHYACIVDLLGRVGFLKEASEIVK 595
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 208/401 (51%), Gaps = 15/401 (3%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D SM Y G +R +FD M K+VV+ +A++ + L+E + M
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 127 ----ERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMID--GYVKVKE 176
E N S+N ++SGF + G +A +F+++ CP+ V+ + ++ G ++
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF 236
G + + + +++ + MI+ ++G LF + A ITG
Sbjct: 270 MGRLIHGYVIKQGL-LKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 237 CKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
+ G VD+A +F+ + + ++ SW +I G AQNG+ EAL LF +M G++P+
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
+ S+ AC ++A L GR T+ ++ ++ V +AL+ MY+KCG I S++ F
Sbjct: 389 VTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNM 448
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
++V WN+++ F+ H + S F+ ++ ++PD I+F SLLS C + G DE
Sbjct: 449 MPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F +M +YGI PR EHY+C+V+++ RAG+LQ A ++I+
Sbjct: 509 WKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIK 549
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 97/205 (47%), Gaps = 1/205 (0%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
Q + S +I + ++A + Q I I S++ +I + +++ +FS+
Sbjct: 47 QNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSR 106
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M G+ PD + +LF CA L+ G+Q + + G D D V ++ MY +CG
Sbjct: 107 MFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGR 166
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ D+ F + S D+V+ + ++ A+A+ + +M + G+ + +++ +LS
Sbjct: 167 MGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSG 226
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPP 427
R+G E++ +F +H G P
Sbjct: 227 FNRSGYHKEAVVMFQ-KIHHLGFCP 250
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V+ + I +++ G I ++ VF+ MPTK++V WNS++ + G + ++F+++
Sbjct: 422 NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLM 481
Query: 96 ----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRL 146
+ +S+ ++++ C Q + DE + YF M E Y+ M++ + G+L
Sbjct: 482 RTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKL 541
Query: 147 CDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMIN 203
+A L KEMP P+ + +++ +++ +A A LF P N ++ ++ N
Sbjct: 542 QEAYDLIKEMPFEPDSCVWGALLNS-CRLQNNVDLAEIAAEKLFHLEP-ENPGTYVLLSN 599
Query: 204 GLVENGLYEEAWELFGRM 221
G++ E + +M
Sbjct: 600 IYAAKGMWTEVDSIRNKM 617
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 218/426 (51%), Gaps = 22/426 (5%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK--- 97
N + ++ AG A VF +MPTKD+++WNS++ ++ + G + L +M
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 98 -NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRL 152
N V++ + +A C D ++ + N NA++S + K G + +++R+
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSW------TVMINGLV 206
+MP +VV++ +I GY + ++ +A A F M R VS +V+ L+
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPD---KALAAFQTM-RVEGVSSNYITVVSVLSACLL 475
Query: 207 ENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
L E L + + + ++IT + K G + + LF + R+I +WN
Sbjct: 476 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 535
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
M+ A +G GEE L L S+M G+ D F +A A LA+L++G+Q + L +K G
Sbjct: 536 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 595
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
F+ D + NA MYSKCG I + + + SWN +I+A +H + + + F
Sbjct: 596 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 655
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M+ +G++P +TF+SLL+ C G +D+ + ++++ D+G+ P EH C++D++ R+
Sbjct: 656 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 715
Query: 443 GQLQRA 448
G+L A
Sbjct: 716 GRLAEA 721
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 177/381 (46%), Gaps = 34/381 (8%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM------PMKNVV 100
+++ G + AR +FD MP ++ V+WN+M++ G F M P V+
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 101 SWNAMVAGCVQN-DMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGRLCDAQRLFKE 155
+ ++V C ++ M E + + S A++ + +G + ++++F+E
Sbjct: 62 A--SLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLY 211
MP NVVS+T ++ GY + G ++ M NE S +++I+ GL
Sbjct: 120 MPDRNVVSWTSLMVGY---SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLL 173
Query: 212 EEAWELFGRMPQKNVVAS---------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
++ E GR VV S ++I+ G VD A +F Q+ RD SWN
Sbjct: 174 KD--ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNS 231
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+ YAQNG EE+ +FS M R + + +L + + GR + LV+K G
Sbjct: 232 IAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 291
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
FDS + V N L+ MY+ G V++ L F Q D++SWN+++A+F A
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 351
Query: 383 QMIAVGVRPDGITFLSLLSVC 403
MI+ G + +TF S L+ C
Sbjct: 352 SMISSGKSVNYVTFTSALAAC 372
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 183/433 (42%), Gaps = 52/433 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV ++L Y G SR +F+ MP +NVVSW +++ G +E + + M
Sbjct: 93 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 152
Query: 127 ER----NAASYNAMIS--GFIK---FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
N S + +IS G +K GR Q + + V +++ +
Sbjct: 153 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLI----SMLGSM 208
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ-KNVVASTAMITGF 236
G + A +FD M R+ +SW + +NG EE++ +F M + + V ST + T
Sbjct: 209 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 268
Query: 237 CKQGKVD--------------------------------------EAWTLFQQIRCRDIA 258
G VD EA +F+Q+ +D+
Sbjct: 269 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI 328
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SWN ++ + +GR +AL L M+ +G + + F S AC + ++GR + LV
Sbjct: 329 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 388
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+ G + + NALV+MY K G + +S Q + D+V+WN +I +A+ KA
Sbjct: 389 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 448
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
+ F M GV + IT +S+LS C G + E + + G L+ +
Sbjct: 449 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM 508
Query: 439 MSRAGQLQRACEI 451
++ G L + ++
Sbjct: 509 YAKCGDLSSSQDL 521
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 182/402 (45%), Gaps = 18/402 (4%)
Query: 13 PTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWN 72
P R H L+V + F Y+ N ++ + + G ++ +R+V +MP +DVV WN
Sbjct: 375 PDFFEKGRILHGLVVVSGLF--YNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 432
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGC-VQNDMLDEAFNYFA---- 123
+++ Y P + A F M ++ N ++ ++++ C + D+L+ A
Sbjct: 433 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492
Query: 124 AMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
A E + N++I+ + K G L +Q LF + N++++ M+ G + +
Sbjct: 493 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 552
Query: 184 RALFDAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITG----FCK 238
+ + ++ S++ ++ + + EE +L G + + + + K
Sbjct: 553 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 612
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
G++ E + R + SWNI+I+ ++G EE F +M+ G++P + FVSL
Sbjct: 613 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672
Query: 299 FTACASLALLDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QP 356
TAC+ L+D+G Y ++ + G + + ++ + + G + ++E + +P
Sbjct: 673 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 732
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
+ + W +++A+ H + R + + + D + LS
Sbjct: 733 NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 774
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 135/437 (30%), Positives = 225/437 (51%), Gaps = 24/437 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF-DAM 94
DV A ++ +S+ G + A Q+F + +DVV+W++M+ +Y +G + +LF D M
Sbjct: 334 DVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM 393
Query: 95 PMK---NVVSWNAMVAGC--VQNDMLDEAFNYFA--AMPERNAASYNAMISGFIKFGRLC 147
+ N V+ +++ GC V L ++ + +A A E + A+IS + K GR
Sbjct: 394 RIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFS 453
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
A + F+ +P + V++ + GY ++ G +A ++ M + + G+++
Sbjct: 454 PALKAFERLPIKDAVAFNALAQGYTQI---GDANKAFDVYKNMKLHGVCPDSRTMVGMLQ 510
Query: 208 NGL----YEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAWTLFQQIRC---RD 256
Y ++G++ + + A+I F K + A LF +C +
Sbjct: 511 TCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFD--KCGFEKS 568
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
SWNIM+ GY +G+ EEA+ F QM QP+ + FV++ A A L+ L G ++
Sbjct: 569 TVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHS 628
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
+I+ GF S V N+LV MY+KCG I SE F + S IVSWNT+++A+A H L
Sbjct: 629 SLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASC 688
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
A S F M ++PD ++FLS+LS C AG ++E +F M + I EHYAC+V
Sbjct: 689 AVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMV 748
Query: 437 DVMSRAGQLQRACEIIR 453
D++ +AG A E++R
Sbjct: 749 DLLGKAGLFGEAVEMMR 765
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 166/384 (43%), Gaps = 52/384 (13%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV +++ Y + +R +FD M +K+VV+WN MV+G QN A F M
Sbjct: 134 DVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR 193
Query: 127 E-----RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV---MIDGYVKVKEGG 178
+ + YN +I K + D R + + +ID Y +
Sbjct: 194 SCCVDIDHVSLYN-LIPAVSKLEK-SDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCAD-- 249
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ--------------- 223
+ A ++F+ + R++E SW M+ NG +EE ELF M
Sbjct: 250 -LYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQ 308
Query: 224 ------------------------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
+V +T++++ + K G+++ A LF I RD+ S
Sbjct: 309 AAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVS 368
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
W+ MI Y Q G+ +EA++LF M+R ++P+ + S+ CA +A G+ + I
Sbjct: 369 WSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAI 428
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K +S+L A+++MY+KCG + AF + D V++N + + Q KA
Sbjct: 429 KADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFD 488
Query: 380 YFDQMIAVGVRPDGITFLSLLSVC 403
+ M GV PD T + +L C
Sbjct: 489 VYKNMKLHGVCPDSRTMVGMLQTC 512
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 174/398 (43%), Gaps = 49/398 (12%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQ 111
N QV + + N ++ AY SR +FD++ VV WN+M+ G +
Sbjct: 17 NFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTR 76
Query: 112 NDMLDEAFNYFAAMPERNAASYN--------AMISGFIKFGRLCDAQRLFKEMPCP-NVV 162
+ EA +F M E + +G + F + L EM +V
Sbjct: 77 AGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVY 136
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP 222
T +++ Y K ++ + AR +FD M ++ V+W M++GL +NG A LF M
Sbjct: 137 IGTALVEMYCKARD---LVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMR 193
Query: 223 ---------------------QKNVVA----------------STAMITGFCKQGKVDEA 245
+K+ V S+ +I +C + A
Sbjct: 194 SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAA 253
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
++F+++ +D +SW M+ YA NG EE L LF M ++ + + S A A +
Sbjct: 254 ESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYV 313
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L +G + ++ G D+SV +L++MYSKCG + +E F D+VSW+ +I
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
A++ Q + +A S F M+ + ++P+ +T S+L C
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGC 411
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 203/422 (48%), Gaps = 21/422 (4%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP-----MKN 98
I + ++ AA VF+++ KD +W +M+ AY H+GF + LFD M M
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK 300
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAMPER---NAASYNAMISGFIKFGRLCDAQRLFKE 155
V + +A+ A D++ + A+ + + + +++S + K G L A++LF
Sbjct: 301 VAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFIN 360
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVSWTVMINGL--VENG 209
+ +VVS++ MI Y ++ G A +LF M R N V+ T ++ G V
Sbjct: 361 IEDRDVVSWSAMIASY---EQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 210 LYEEAWELFGRMP--QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
++ + + + +TA+I+ + K G+ A F+++ +D ++N + GY
Sbjct: 418 RLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGY 477
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
Q G +A +++ M G+ PD V + CA + +G Y +IKHGFDS+
Sbjct: 478 TQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSEC 537
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
V +AL+ M++KC ++ + + F + + VSWN ++ + H +A + F QM
Sbjct: 538 HVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKV 597
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
+P+ +TF++++ + M++ + ++ G ++ LVD+ ++ G ++
Sbjct: 598 EKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQ-CGFCSQTPVGNSLVDMYAKCGMIE 656
Query: 447 RA 448
+
Sbjct: 657 SS 658
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 129/310 (41%), Gaps = 51/310 (16%)
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------------ 224
+R +FD++ V W MI G GL+ EA FG M ++
Sbjct: 52 SRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA 111
Query: 225 ----------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+V TA++ +CK + A +F ++ +D+ +WN
Sbjct: 112 GSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNT 171
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
M++G AQNG AL LF M + D + +L A + L D R + LVIK G
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
F + ++ L+ MY C + +E F + + D SW T++AA+A + + + FD
Sbjct: 232 F--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFD 289
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY----GIPPRSEHYACLVDV 438
M VR + + S L G + + + +HDY G+ L+ +
Sbjct: 290 LMRNYDVRMNKVAAASALQAAAYVGDL-----VKGIAIHDYAVQQGLIGDVSVATSLMSM 344
Query: 439 MSRAGQLQRA 448
S+ G+L+ A
Sbjct: 345 YSKCGELEIA 354
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQ----------IRCRDIASWNIMITGYAQNGRGEEA 276
V + +++G ++ A++LFQ+ +R + WN MI GY + G EA
Sbjct: 24 VHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREA 83
Query: 277 LNLFSQMVR-TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
L F M G+ PD F ACA +G + + L+ + G +SD+ + ALV
Sbjct: 84 LGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVE 143
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MY K +V + F + D+V+WNT+++ AQ+ A F M + V D ++
Sbjct: 144 MYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVS 203
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMV 420
+L+ + K D L L++
Sbjct: 204 LYNLIPAVSKLEKSDVCRCLHGLVI 228
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 218/426 (51%), Gaps = 22/426 (5%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK--- 97
N + ++ AG A VF +MPTKD+++WNS++ ++ + G + L +M
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 342
Query: 98 -NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRL 152
N V++ + +A C D ++ + N NA++S + K G + +++R+
Sbjct: 343 VNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 402
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSW------TVMINGLV 206
+MP +VV++ +I GY + ++ +A A F M R VS +V+ L+
Sbjct: 403 LLQMPRRDVVAWNALIGGYAEDEDPD---KALAAFQTM-RVEGVSSNYITVVSVLSACLL 458
Query: 207 ENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
L E L + + + ++IT + K G + + LF + R+I +WN
Sbjct: 459 PGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNA 518
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
M+ A +G GEE L L S+M G+ D F +A A LA+L++G+Q + L +K G
Sbjct: 519 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 578
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
F+ D + NA MYSKCG I + + + SWN +I+A +H + + + F
Sbjct: 579 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 638
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M+ +G++P +TF+SLL+ C G +D+ + ++++ D+G+ P EH C++D++ R+
Sbjct: 639 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 698
Query: 443 GQLQRA 448
G+L A
Sbjct: 699 GRLAEA 704
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 183/433 (42%), Gaps = 52/433 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV ++L Y G SR +F+ MP +NVVSW +++ G +E + + M
Sbjct: 76 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 135
Query: 127 ER----NAASYNAMIS--GFIK---FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
N S + +IS G +K GR Q + + V +++ +
Sbjct: 136 GEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLI----SMLGSM 191
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ-KNVVASTAMITGF 236
G + A +FD M R+ +SW + +NG EE++ +F M + + V ST + T
Sbjct: 192 GNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLL 251
Query: 237 CKQGKVD--------------------------------------EAWTLFQQIRCRDIA 258
G VD EA +F+Q+ +D+
Sbjct: 252 SVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLI 311
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SWN ++ + +GR +AL L M+ +G + + F S AC + ++GR + LV
Sbjct: 312 SWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+ G + + NALV+MY K G + +S Q + D+V+WN +I +A+ KA
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKAL 431
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
+ F M GV + IT +S+LS C G + E + + G L+ +
Sbjct: 432 AAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITM 491
Query: 439 MSRAGQLQRACEI 451
++ G L + ++
Sbjct: 492 YAKCGDLSSSQDL 504
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/367 (27%), Positives = 168/367 (45%), Gaps = 38/367 (10%)
Query: 63 MPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM------PMKNVVSWNAMVAGCVQN-DML 115
MP ++ V+WN+M++ G F M P V++ ++V C ++ M
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIA--SLVTACGRSGSMF 58
Query: 116 DEAFNYFAAMPERNAAS----YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGY 171
E + + S A++ + +G + ++++F+EMP NVVS+T ++ GY
Sbjct: 59 REGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGY 118
Query: 172 VKVKEGGGIARARALFDAMPRR----NEVSWTVMIN--GLVENGLYEEAWELFGRMPQKN 225
+ G ++ M NE S +++I+ GL+++ E GR
Sbjct: 119 ---SDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD-------ESLGRQIIGQ 168
Query: 226 VVAS---------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
VV S ++I+ G VD A +F Q+ RD SWN + YAQNG EE+
Sbjct: 169 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 228
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+FS M R + + +L + + GR + LV+K GFDS + V N L+ M
Sbjct: 229 FRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRM 288
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y+ G V++ L F Q D++SWN+++A+F A MI+ G + +TF
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTF 348
Query: 397 LSLLSVC 403
S L+ C
Sbjct: 349 TSALAAC 355
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 182/402 (45%), Gaps = 18/402 (4%)
Query: 13 PTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWN 72
P R H L+V + F Y+ N ++ + + G ++ +R+V +MP +DVV WN
Sbjct: 358 PDFFEKGRILHGLVVVSGLF--YNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWN 415
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGC-VQNDMLDEAFNYFA---- 123
+++ Y P + A F M ++ N ++ ++++ C + D+L+ A
Sbjct: 416 ALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Query: 124 AMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
A E + N++I+ + K G L +Q LF + N++++ M+ G + +
Sbjct: 476 AGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKL 535
Query: 184 RALFDAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITG----FCK 238
+ + ++ S++ ++ + + EE +L G + + + + K
Sbjct: 536 VSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 595
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
G++ E + R + SWNI+I+ ++G EE F +M+ G++P + FVSL
Sbjct: 596 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655
Query: 299 FTACASLALLDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QP 356
TAC+ L+D+G Y ++ + G + + ++ + + G + ++E + +P
Sbjct: 656 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 715
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
+ + W +++A+ H + R + + + D + LS
Sbjct: 716 NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLS 757
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 213/419 (50%), Gaps = 25/419 (5%)
Query: 50 AGNITAARQVFDKMPTKD-VVTWNSMLTAYWHSGFPQHSRALFDAMPMKN---------- 98
A I AR++FD+ P +D NSM+ AY + S AL+ + +
Sbjct: 23 AVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFT 82
Query: 99 VVSWNAMVAGCV-QNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP 157
++ + ++ CV Q L F + ++ ++ + KFG++ A+ F EMP
Sbjct: 83 TLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVST--GVVDMYAKFGKMGCARNAFDEMP 140
Query: 158 CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR-RNEVSWTVMINGLVENGLYEEAWE 216
+ VS+T +I GY++ G + A LFD MP ++ V + M++G V++G A
Sbjct: 141 HRSEVSWTALISGYIRC---GELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARR 197
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
LF M K V+ T MI G+C +D A LF + R++ SWN MI GY QN + +E
Sbjct: 198 LFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEG 257
Query: 277 LNLFSQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
+ LF +M T + PDD+ +S+ A + L G + V + D + V A++
Sbjct: 258 IRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILD 317
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV--RPDG 393
MYSKCG I ++ F + + + SWN +I +A L AR+ D + + + +PD
Sbjct: 318 MYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYA---LNGNARAALDLFVTMMIEEKPDE 374
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
IT L++++ C G ++E F++M + G+ + EHY C+VD++ RAG L+ A ++I
Sbjct: 375 ITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEAEDLI 432
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 189/369 (51%), Gaps = 15/369 (4%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+Y + + +++ G + AR FD+MP + V+W ++++ Y G + LFD MP
Sbjct: 112 DMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMP 171
Query: 96 -MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFK 154
+K+VV +NAM+ G V++ + A F M + ++ MI G+ + A++LF
Sbjct: 172 HVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFD 231
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR-----NEVSWTVMINGLVENG 209
MP N+VS+ MI GY + K+ R LF M ++V+ ++ + + G
Sbjct: 232 AMPERNLVSWNTMIGGYCQNKQPQEGIR---LFQEMQATTSLDPDDVTILSVLPAISDTG 288
Query: 210 LYE--EAWELFGRMPQ--KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
E F + + K V TA++ + K G++++A +F ++ + +ASWN MI
Sbjct: 289 ALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIH 348
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
GYA NG AL+LF M+ +PD++ +++ TAC L+++GR+ + ++ + G ++
Sbjct: 349 GYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNA 407
Query: 326 DLSVNNALVTMYSKCGSIVDSE-LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+ +V + + GS+ ++E L +P+ + ++ ++A Q+ +A +
Sbjct: 408 KIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKA 467
Query: 385 IAVGVRPDG 393
+ + + DG
Sbjct: 468 VELEPQNDG 476
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 13/198 (6%)
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW-NIMITGYAQNGRGEEALNLFSQMV 284
V++++A+ G+ ++ LF Q RD + N MI Y + + ++ L+ +
Sbjct: 18 VISASAVGIGYARK--------LFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLR 69
Query: 285 R-TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI 343
+ T PD+ F +L +C+ + QG Q ++ + + GF +D+ V+ +V MY+K G +
Sbjct: 70 KETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKM 129
Query: 344 VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
+ AF + VSW +I+ + + A FDQM V D + + +++
Sbjct: 130 GCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHV---KDVVIYNAMMDGF 186
Query: 404 CRAGKIDESMNLFNLMVH 421
++G + + LF+ M H
Sbjct: 187 VKSGDMTSARRLFDEMTH 204
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/360 (29%), Positives = 189/360 (52%), Gaps = 43/360 (11%)
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR 192
+N ++ + K G L DA+++F EMP ++ S+ VM++GY +V G + AR LFD M
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEV---GLLEEARKLFDEMTE 179
Query: 193 RNEVSWTVMINGLVENGLYEEA---WELFGRMPQK------------------------- 224
++ SWT M+ G V+ EEA + L R+P
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 225 ------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGR 272
+ V ++++ + K G +DEA +F +I +D+ SW MI Y ++ R
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 273 GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
E +LFS++V + +P++ F + ACA L + G+Q + + + GFD +++
Sbjct: 300 WREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSS 359
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
LV MY+KCG+I ++ +PD+VSW ++I AQ+ +A YFD ++ G +PD
Sbjct: 360 LVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPD 419
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+TF+++LS C AG +++ + F + + + S+HY CLVD+++R+G+ ++ +I
Sbjct: 420 HVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVI 479
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/430 (22%), Positives = 195/430 (45%), Gaps = 51/430 (11%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+++ G++ AR+VFD+MP +D+ +WN M+ Y G + +R LFD M K+ SW AMV
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 107 AGCVQNDMLDEAFNYFAAMP---------------------------------------- 126
G V+ D +EA ++ M
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE-GGGIARARA 185
+ + +++++ + K G + +A+ +F ++ +VVS+T MID Y K G +
Sbjct: 250 DSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSE 309
Query: 186 LFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGK 241
L + R NE ++ ++N + E ++ G M + AS++++ + K G
Sbjct: 310 LVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGN 369
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
++ A + D+ SW +I G AQNG+ +EAL F ++++G +PD + FV++ +A
Sbjct: 370 IESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSA 429
Query: 302 CASLALLDQGRQ-TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIV 359
C L+++G + Y++ KH LV + ++ G + + +P
Sbjct: 430 CTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF 489
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG-ITFLSLLSVCCRAGKIDESMNLFNL 418
W +++ + + A ++ + P+ +T++++ ++ AGK +E +
Sbjct: 490 LWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEEEGKMRKR 547
Query: 419 MVHDYGIPPR 428
M + G+ R
Sbjct: 548 M-QEIGVTKR 556
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 78/147 (53%), Gaps = 4/147 (2%)
Query: 273 GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
G++ L Q++ +P + +L C+ L++G++ + + GF + + N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
L+ MY+KCGS+VD+ F + D+ SWN ++ +A+ L +AR FD+M D
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEM----TEKD 181
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLM 419
++ ++++ + + +E++ L++LM
Sbjct: 182 SYSWTAMVTGYVKKDQPEEALVLYSLM 208
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 228/439 (51%), Gaps = 26/439 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+Y + I + + G + A ++FD++ D+VTW+SM++ + +G P + F M
Sbjct: 95 DLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMV 154
Query: 96 MKNVVSWN-----AMVAGCVQ--NDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRL 146
M + V+ + +V+ C + N L + F + + N++++ + K
Sbjct: 155 MASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAF 214
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF-DAMPRRNEVSWTVMINGL 205
+A LFK + +V+S++ +I YV + G A A +F D M E + ++ L
Sbjct: 215 KEAVNLFKMIAEKDVISWSTVIACYV---QNGAAAEALLVFNDMMDDGTEPNVATVLCVL 271
Query: 206 --------VENGLYEEAWELFGRMP-QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+E G + EL R + V STA++ + K +EA+ +F +I +D
Sbjct: 272 QACAAAHDLEQG--RKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKD 329
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMV-RTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
+ SW +I+G+ NG ++ FS M+ +PD ++ V + +C+ L L+Q + +
Sbjct: 330 VVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFH 389
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
+ VIK+GFDS+ + +LV +YS+CGS+ ++ F + D V W ++I + H
Sbjct: 390 SYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGT 449
Query: 376 KARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
KA F+ M+ + V+P+ +TFLS+LS C AG I E + +F LMV+DY + P EHYA
Sbjct: 450 KALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAV 509
Query: 435 LVDVMSRAGQLQRACEIIR 453
LVD++ R G L A EI +
Sbjct: 510 LVDLLGRVGDLDTAIEITK 528
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 197/425 (46%), Gaps = 43/425 (10%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAY-----WHSGFPQHSRALFDAMPMKNV----------- 99
ARQ+F +M + + WN++L + W S D N
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 100 ---VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM 156
V++ M+ G V+ D+ + Y + ++I +IK GR+ +A R+F E+
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGS----------SLIYMYIKCGRMIEALRMFDEL 122
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
P++V+++ M+ G+ K G +A F M ++V+ + + + + +
Sbjct: 123 EKPDIVTWSSMVSGFEK---NGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNS 179
Query: 217 LFGRMPQKNVVAS---------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
GR V+ +++ + K EA LF+ I +D+ SW+ +I Y
Sbjct: 180 RLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACY 239
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
QNG EAL +F+ M+ G +P+ + + ACA+ L+QGR+T+ L I+ G ++++
Sbjct: 240 VQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEV 299
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
V+ ALV MY KC S ++ F + + D+VSW +I+ F + + +++ F M+
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Query: 388 -GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
RPD I + +L C G ++++ F+ V YG A LV++ SR G L
Sbjct: 360 NNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLG 418
Query: 447 RACEI 451
A ++
Sbjct: 419 NASKV 423
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 96/175 (54%), Gaps = 5/175 (2%)
Query: 235 GFCKQ--GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
GFC++ VD A +F ++ R + WN ++ ++ + EE L FS M R +PD+
Sbjct: 2 GFCRKFSSSVD-ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDN 60
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
AC L ++ G + V K SDL V ++L+ MY KCG ++++ F
Sbjct: 61 FTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFD 120
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITFLSLLSVCCR 405
+ +PDIV+W+++++ F ++ Y+A +F +M+ A V PD +T ++L+S C +
Sbjct: 121 ELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTK 175
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 163/402 (40%), Gaps = 85/402 (21%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT 65
+VS K + S R H ++ + + + LN A SRA A +F +
Sbjct: 169 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA--FKEAVNLFKMIAE 226
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
KDV++W++++ Y +G + +F NDM+D+
Sbjct: 227 KDVISWSTVIACYVQNGAAAEALLVF--------------------NDMMDDG------- 259
Query: 126 PERNAASYNAMISGF-----IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGI 180
E N A+ ++ ++ GR + K + VS T ++D Y+K
Sbjct: 260 TEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVS-TALVDMYMKCFSP--- 315
Query: 181 ARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMIT------ 234
A A+F +PR++ VSW +I+G NG+ + E F M +N A++
Sbjct: 316 EEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGS 375
Query: 235 ----GFCKQ------------------------------GKVDEAWTLFQQIRCRDIASW 260
GF +Q G + A +F I +D W
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
+ITGY +G+G +AL F+ MV++ ++P+++ F+S+ +AC+ L+ +G + + L++
Sbjct: 436 TSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 495
Query: 320 K-HGFDSDLSVNNALVTMYSKCGSI-----VDSELAFGQTSQ 355
+ +L LV + + G + + + F T Q
Sbjct: 496 NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQ 537
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/440 (29%), Positives = 209/440 (47%), Gaps = 51/440 (11%)
Query: 62 KMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
K+P+ D V +L Y G + + +F+ + ++NVV W +M+AG V+ND+ +E
Sbjct: 170 KVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVL 229
Query: 122 FAAMPERNAA----SYNAMISGFIKFGRLCDAQ----RLFKEMPCPNVVSYTVMIDGYVK 173
F M E N +Y +I K L + L K + T ++D YVK
Sbjct: 230 FNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVK 289
Query: 174 VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVAS 229
G I+ AR +F+ + V WT MI G NG EA LF +M + N V
Sbjct: 290 C---GDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTI 346
Query: 230 TAMITG----------------------------------FCKQGKVDEAWTLFQQIRCR 255
++++G + K + +A +F+ +
Sbjct: 347 ASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
DI +WN +I+G++QNG EAL LF +M + P+ + SLF+ACASL L G +
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 316 ALVIKHGF--DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
A +K GF S + V AL+ Y+KCG + L F + + ++W+ +I + +
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGD 526
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
+ F++M+ +P+ TF S+LS C G ++E F+ M DY P ++HY
Sbjct: 527 TIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYT 586
Query: 434 CLVDVMSRAGQLQRACEIIR 453
C+VD+++RAG+L++A +II
Sbjct: 587 CMVDMLARAGELEQALDIIE 606
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 202/457 (44%), Gaps = 63/457 (13%)
Query: 47 FSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSW 102
S+ NI + RQ + D+ +++ Y G+ + +R +FD +P + W
Sbjct: 51 LSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLW 110
Query: 103 NAMV-AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC-DAQRL-------- 152
M+ C+ + ++ Y M ++ Y+ ++ F K + C + Q L
Sbjct: 111 KVMLRCYCLNKESVEVVKLYDLLM--KHGFRYDDIV--FSKALKACTELQDLDNGKKIHC 166
Query: 153 -FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
++P + V T ++D Y K E I A +F+ + RN V WT MI G V+N L
Sbjct: 167 QLVKVPSFDNVVLTGLLDMYAKCGE---IKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 212 EEAWELFGRMPQKNVVAS---------------------------------------TAM 232
EE LF RM + NV+ + T++
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 233 ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
+ + K G + A +F + D+ W MI GY NG EAL+LF +M ++P+
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
+ S+ + C + L+ GR + L IK G D +V NALV MY+KC D++ F
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
S+ DIV+WN+II+ F+Q+ ++A F +M + V P+G+T SL S C G +
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 413 MNLFNLMVHDYGIPPRSEHYA-CLVDVMSRAGQLQRA 448
+L V + S H L+D ++ G Q A
Sbjct: 463 SSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA 499
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 148/309 (47%), Gaps = 15/309 (4%)
Query: 105 MVAGCVQNDMLDEAFNYFAA---MPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV 161
+++ C D L ++ M + + A+ + GF FG DA+ +F ++P P+
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGF--FGYTKDARLVFDQIPEPDF 107
Query: 162 VSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWEL 217
+ VM+ Y KE + + L+D + R +++ ++ + E + ++
Sbjct: 108 YLWKVMLRCYCLNKESVEVVK---LYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 218 ---FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
++P + V T ++ + K G++ A +F I R++ W MI GY +N E
Sbjct: 165 HCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCE 224
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
E L LF++M + ++ + +L AC L+ L QG+ + ++K G + + +L+
Sbjct: 225 EGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
MY KCG I ++ F + S D+V W +I + + +A S F +M V ++P+ +
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 395 TFLSLLSVC 403
T S+LS C
Sbjct: 345 TIASVLSGC 353
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 125/301 (41%), Gaps = 44/301 (14%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+D AN + +++ A+ VF+ KD+V WNS+++ + +G + LF M
Sbjct: 375 WDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM 434
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF-IKFGRLCDAQRLF 153
++V VA + F+A + + + + + +K G L +
Sbjct: 435 NSESVTPNGVTVA------------SLFSACASLGSLAVGSSLHAYSVKLGFLASS---- 478
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
+V T ++D Y K G AR +FD + +N ++W+ MI G + G
Sbjct: 479 ------SVHVGTALLDFYAKC---GDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIG 529
Query: 214 AWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRD------IASWNIM 263
+ ELF M +K N T++++ G V+E F + +D + M
Sbjct: 530 SLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMY-KDYNFTPSTKHYTCM 588
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
+ A+ G E+AL++ +M +QPD F + C + D G +VIK
Sbjct: 589 VDMLARAGELEQALDIIEKM---PIQPDVRCFGAFLHGCGMHSRFDLGE----IVIKKML 641
Query: 324 D 324
D
Sbjct: 642 D 642
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
L + C ++ D RQ++ ++ +G D+S+ LV++Y G D+ L F Q +PD
Sbjct: 50 LLSKCTNI---DSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
W ++ + + + +D ++ G R D I F L C +D +
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 418 LMVHDYGIPP-RSEHYACLVDVMSRAGQLQRACEI 451
+V +P + L+D+ ++ G+++ A ++
Sbjct: 167 QLVK---VPSFDNVVLTGLLDMYAKCGEIKSAHKV 198
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 207/379 (54%), Gaps = 11/379 (2%)
Query: 85 QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFG 144
+ +R LFD MP +N+V+WN M+ G + ++++A F + E++ S+ MI G ++
Sbjct: 225 KDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKN 284
Query: 145 RLCDAQRLFKEM-PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR-----NEVSW 198
+L +A + EM C S +M+D G ++ L + +R + +
Sbjct: 285 QLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQA 344
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
T++ V N + + A + F + ++ + A+I GF K G V++A +F Q +DI
Sbjct: 345 TIIHFYAVSNDI-KLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIF 403
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWN MI+GYAQ+ + AL+LF +M+ + ++PD + VS+F+A +SL L++G++ +
Sbjct: 404 SWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDY 463
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT---SQPDIVSWNTIIAAFAQHVLY 374
+ + ++ A++ MY+KCGSI + F QT S I WN II A H
Sbjct: 464 LNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHA 523
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
A + + ++ ++P+ ITF+ +LS CC AG ++ F M D+GI P +HY C
Sbjct: 524 KLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGC 583
Query: 435 LVDVMSRAGQLQRACEIIR 453
+VD++ +AG+L+ A E+I+
Sbjct: 584 MVDLLGKAGRLEEAKEMIK 602
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 135/491 (27%), Positives = 224/491 (45%), Gaps = 59/491 (12%)
Query: 9 IALKPTPSSTARHTHFLLVFAKHFS--SYDVYRANLN-IAAFSRAGNITAARQVFDKMPT 65
I+L+ S THF FS S D RA ++ + + + + ++T RQ+ ++
Sbjct: 16 ISLQARCFSAPSRTHF------DFSGESSDTERALVSALGSCASSNDVTCGRQIHCRVLK 69
Query: 66 KDVVT----WNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
+ + NS+L Y + ++F + S+N MV G V++ L +A
Sbjct: 70 SGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKL 129
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV-KEGGGI 180
F MPER+ SY +I G+ + + +A LF+EM ++ V + + GGI
Sbjct: 130 FDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGI 189
Query: 181 ARARALFD-AMPRRNEVSWTVMINGLVENGL---YEEAWELFGRMPQKNVVASTAMITGF 236
R L A+ + E V N L L ++A +LF MP++N+V M+ G+
Sbjct: 190 WDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGY 249
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
K G +++A LF QI +DI SW MI G + + +EAL +++M+R GM+P +++ V
Sbjct: 250 SKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMV 309
Query: 297 SLFTACASLALLDQGRQTYALVIKHGFD-------------------------------S 325
L +A A +G Q + ++K GFD
Sbjct: 310 DLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKD 369
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI 385
++ NAL+ + K G + + F QT DI SWN +I+ +AQ + A F +MI
Sbjct: 370 HIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI 429
Query: 386 AVG-VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY----GIPPRSEHYACLVDVMS 440
+ V+PD IT +S+ S G ++E HDY IPP A ++D+ +
Sbjct: 430 SSSQVKPDAITMVSVFSAISSLGSLEEGKR-----AHDYLNFSTIPPNDNLTAAIIDMYA 484
Query: 441 RAGQLQRACEI 451
+ G ++ A I
Sbjct: 485 KCGSIETALNI 495
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 198 bits (503), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 214/439 (48%), Gaps = 26/439 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ + F + ++ A +VF++MP +D TWN+ML+ + SG + +LF M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP--------ERNAASYNAMISGFIKFGRLC 147
+ + + V +Q+ +++ AM + N IS + K G L
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 148 DAQRLFKEMPCPN--VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN-EVSWTVMIN- 203
A+ +F+ + + VVS+ M Y E A L+ M R + + IN
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEA---FDAFGLYCLMLREEFKPDLSTFINL 262
Query: 204 --------GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
L + L G +++ A I+ + K A LF + R
Sbjct: 263 AASCQNPETLTQGRLIHSHAIHLG--TDQDIEAINTFISMYSKSEDTCSARLLFDIMTSR 320
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
SW +MI+GYA+ G +EAL LF M+++G +PD + +SL + C L+ G+
Sbjct: 321 TCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWID 380
Query: 316 ALVIKHGFDSD-LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
A +G D + + NAL+ MYSKCGSI ++ F T + +V+W T+IA +A + ++
Sbjct: 381 ARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIF 440
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
+A F +MI + +P+ ITFL++L C +G +++ F++M Y I P +HY+C
Sbjct: 441 LEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSC 500
Query: 435 LVDVMSRAGQLQRACEIIR 453
+VD++ R G+L+ A E+IR
Sbjct: 501 MVDLLGRKGKLEEALELIR 519
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 170/354 (48%), Gaps = 26/354 (7%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKD--VVTWNSMLTAYWHSGFPQHSRALFDAMPMK 97
AN I+ + + G++ +A+ VF+ + D VV+WNSM AY G + L+ M +
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 98 ----NVVSWNAMVAGCVQNDMLDEA----FNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
++ ++ + A C + L + + +++ + N IS + K C A
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 150 QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE----VSWTVMINGL 205
+ LF M VS+TVMI GY E G + A ALF AM + E V+ +I+G
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYA---EKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 206 VENGLYEEA-W-----ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
+ G E W +++G + NV+ A+I + K G + EA +F + + +
Sbjct: 368 GKFGSLETGKWIDARADIYG-CKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVT 426
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
W MI GYA NG EAL LFS+M+ +P+ + F+++ ACA L++G + + ++
Sbjct: 427 WTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMK 486
Query: 320 K-HGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ + L + +V + + G + ++ EL +++PD W ++ A H
Sbjct: 487 QVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 5/169 (2%)
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +WN+ I E+L LF +M R G +P++ F + ACA LA + +A
Sbjct: 17 VNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHA 76
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
+IK F SD+ V A V M+ KC S+ + F + + D +WN +++ F Q K
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDK 136
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
A S F +M + PD +T ++L+ ++ ++S+ L M H GI
Sbjct: 137 AFSLFREMRLNEITPDSVTVMTLI----QSASFEKSLKLLEAM-HAVGI 180
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 114/248 (45%), Gaps = 22/248 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM- 94
D+ N I+ +S++ + +AR +FD M ++ V+W M++ Y G + ALF AM
Sbjct: 290 DIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMI 349
Query: 95 ---PMKNVVSWNAMVAGCVQNDMLD-----EAFNYFAAMPERNAASYNAMISGFIKFGRL 146
++V+ ++++GC + L+ +A N NA+I + K G +
Sbjct: 350 KSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSI 409
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMI 202
+A+ +F P VV++T MI GY G A LF M + N +++ ++
Sbjct: 410 HEARDIFDNTPEKTVVTWTTMIAGYAL---NGIFLEALKLFSKMIDLDYKPNHITFLAVL 466
Query: 203 NGLVENGLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTLFQQIRCR-D 256
+G E+ WE F M Q ++ + M+ ++GK++EA L + + + D
Sbjct: 467 QACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPD 526
Query: 257 IASWNIMI 264
W ++
Sbjct: 527 AGIWGALL 534
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V N I +S+ G+I AR +FD P K VVTW +M+ Y +G + LF M
Sbjct: 392 NVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMI 451
Query: 96 ----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFGRL 146
N +++ A++ C + L++ + YF M + S Y+ M+ + G+L
Sbjct: 452 DLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKL 511
Query: 147 CDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMIN 203
+A L + M P+ + +++ K+ IA A +LF+ P+ + M N
Sbjct: 512 EEALELIRNMSAKPDAGIWGALLNA-CKIHRNVKIAEQAAESLFNLEPQM-AAPYVEMAN 569
Query: 204 GLVENGLYEEAWELFGR----MPQKNV 226
G+ W+ F R M Q+N+
Sbjct: 570 IYAAAGM----WDGFARIRSIMKQRNI 592
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 131/451 (29%), Positives = 209/451 (46%), Gaps = 65/451 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DVY N I+ + + G A +VF++MP +D+V+WNSM++ Y G S LF
Sbjct: 164 DVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLF---- 219
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAF--NYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
+ML F + F+ M A S+ K G+ +
Sbjct: 220 ----------------KEMLKCGFKPDRFSTMSALGACSHVYS----PKMGKEIHCHAVR 259
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
+ +V+ T ++D Y K G ++ A +F+ M +RN V+W VMI NG +
Sbjct: 260 SRIETGDVMVMTSILDMYSKY---GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTD 316
Query: 214 AWELFGRMPQKN------------------------------------VVASTAMITGFC 237
A+ F +M ++N +V TA+I +
Sbjct: 317 AFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYG 376
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
+ G++ A +F ++ +++ SWN +I Y QNG+ AL LF ++ + + PD S
Sbjct: 377 ECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIAS 436
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
+ A A L +GR+ +A ++K + S+ + N+LV MY+ CG + D+ F D
Sbjct: 437 ILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKD 496
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
+VSWN+II A+A H + F +MIA V P+ TF SLL+ C +G +DE F
Sbjct: 497 VVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFE 556
Query: 418 LMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
M +YGI P EHY C++D++ R G A
Sbjct: 557 SMKREYGIDPGIEHYGCMLDLIGRTGNFSAA 587
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 186/391 (47%), Gaps = 30/391 (7%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQ 111
A Q+FD+M D WN M+ + G + + M V ++ ++
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 112 NDMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVM 167
L+E A + + S N++IS ++K G DA+++F+EMP ++VS+ M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 168 IDGYVKVKEGGGIARARALFDAM-------PRRNEVSWTVMINGLVENGLYEE--AWELF 218
I GY+ + +G + LF M R + +S + + + +E +
Sbjct: 203 ISGYLALGDG---FSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVR 259
Query: 219 GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
R+ +V+ T+++ + K G+V A +F + R+I +WN+MI YA+NGR +A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 279 LFSQMV-RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
F +M + G+QPD + ++L A A L +GR + ++ GF + + AL+ MY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+CG + +E+ F + ++ +++SWN+IIAA+ Q+ Y A F ++ + PD T
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
S+L + + E +H Y + R
Sbjct: 436 SILPAYAESLSLSEGRE-----IHAYIVKSR 461
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 101/181 (55%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
Q N A T + GF +++A LF ++ D WN+MI G+ G EA+ +S+
Sbjct: 61 QVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSR 120
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
MV G++ D + + + A ++ L++G++ +A+VIK GF SD+ V N+L+++Y K G
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
D+E F + + DIVSWN++I+ + + + F +M+ G +PD + +S L
Sbjct: 181 AWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGA 240
Query: 403 C 403
C
Sbjct: 241 C 241
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 156/345 (45%), Gaps = 27/345 (7%)
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
+ + N + + GF + DA +LF EM + + VMI G+ G
Sbjct: 56 YKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSC---GLYI 112
Query: 182 RARALFDAM----PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMI 233
A + M + + ++ +I + EE ++ + + +V ++I
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLI 172
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ + K G +A +F+++ RDI SWN MI+GY G G +L LF +M++ G +PD
Sbjct: 173 SLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRF 232
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDS-DLSVNNALVTMYSKCGSIVDSELAFGQ 352
+S AC+ + G++ + ++ ++ D+ V +++ MYSK G + +E F
Sbjct: 233 STMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNG 292
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV-GVRPDGITFLSLLSVCCRAGKIDE 411
Q +IV+WN +I +A++ A F +M G++PD IT ++LL
Sbjct: 293 MIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA--------- 343
Query: 412 SMNLFNLMVHDY----GIPPRSEHYACLVDVMSRAGQLQRACEII 452
S L +H Y G P L+D+ GQL+ A E+I
Sbjct: 344 SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSA-EVI 387
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/399 (30%), Positives = 203/399 (50%), Gaps = 25/399 (6%)
Query: 74 MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY 133
++T Y G +R +FD MP +++ M+ C +N E+ ++F M +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 134 NAMISGFIKFGR-LCDAQRLFKEMPCPNVVSYTV---------MIDGYVKVKEGGGIARA 183
++ +K R L D R F +M V+ ++ +ID Y K G + A
Sbjct: 117 AFIVPSLLKASRNLLD--REFGKMIHCLVLKFSYESDAFIVSSLIDMYSKF---GEVGNA 171
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQ 239
R +F + ++ V + MI+G N +EA L M + +V+ A+I+GF
Sbjct: 172 RKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHM 231
Query: 240 GKVDEAWTLFQQIRCRD-----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
+ +E + ++ C D + SW +I+G N + E+A + F QM+ G+ P+
Sbjct: 232 -RNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSAT 290
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
++L AC +LA + G++ + + G + V +AL+ MY KCG I ++ + F +T
Sbjct: 291 IITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTP 350
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
+ V++N++I +A H L KA FDQM A G + D +TF ++L+ C AG D N
Sbjct: 351 KKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQN 410
Query: 415 LFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
LF LM + Y I PR EHYAC+VD++ RAG+L A E+I+
Sbjct: 411 LFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIK 449
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 165/383 (43%), Gaps = 66/383 (17%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK-------------DVVTWNSMLTAYWHSG 82
++Y+ L + AF + A+R + D+ K D +S++ Y G
Sbjct: 107 EMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFG 166
Query: 83 FPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMIS 138
++R +F + +++V +NAM++G N DEA N M + + ++NA+IS
Sbjct: 167 EVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALIS 226
Query: 139 GFIKFGRLCDAQRLFKEMPC-----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
GF + E+ C P+VVS+T +I G V +A FDA +
Sbjct: 227 GFSHMRNEEKVSEIL-ELMCLDGYKPDVVSWTSIISGLVH-----NFQNEKA-FDAFKQ- 278
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA-----------------------ST 230
++ +GLY + + +P +A +
Sbjct: 279 -----------MLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRS 327
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
A++ + K G + EA LF++ + ++N MI YA +G ++A+ LF QM TG +
Sbjct: 328 ALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKL 387
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVNNALVTMYSKCGSIVDS-EL 348
D L F ++ TAC+ L D G+ + L+ K+ L +V + + G +V++ E+
Sbjct: 388 DHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEM 447
Query: 349 AFGQTSQPDIVSWNTIIAAFAQH 371
+PD+ W ++AA H
Sbjct: 448 IKAMRMEPDLFVWGALLAACRNH 470
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 134/300 (44%), Gaps = 34/300 (11%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYF 122
DV+TWN++++ + H + + + M + +VVSW ++++G V N ++AF+ F
Sbjct: 217 DVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAF 276
Query: 123 AAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS--------YTVMIDGYVKV 174
M +A I + + KE+ +VV+ + ++D Y K
Sbjct: 277 KQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKC 336
Query: 175 KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVAST 230
G I+ A LF P++ V++ MI +GL ++A ELF +M + + + T
Sbjct: 337 ---GFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFT 393
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVR 285
A++T G D LF ++ + + + M+ + G+ EA + M
Sbjct: 394 AILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAM-- 451
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH--GFDSDLSVNNALVT-MYSKCGS 342
M+PD ++ +L AC + ++ R + KH + + S N L+T +Y+ GS
Sbjct: 452 -RMEPDLFVWGALLAACRNHGNMELAR----IAAKHLAELEPENSGNGLLLTSLYANAGS 506
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 196 bits (498), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 219/437 (50%), Gaps = 49/437 (11%)
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
P K + +++ +Y+ G + +R+LFD MP ++VV+W AM+ G ++ A+ F
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 124 AMPERNAA-------------------SYNAMISGFI-KFG------------------- 144
M ++ + +Y A++ G + K G
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 145 -RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG-GGIARARALFDAMPRRNEVSWTVMI 202
+ A +F+++ N V++T +I G+ + +G GG+ + + T+ +
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 203 NGL-----VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
V G A + R Q N+ +++ +C+ G + EA F ++ +D+
Sbjct: 221 RASASIDSVTTGKQIHA-SVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDL 279
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+WN +I+ + EAL +F + G P+ F SL ACA++A L+ G+Q +
Sbjct: 280 ITWNTLISEL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGR 338
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ-TSQPDIVSWNTIIAAFAQHVLYYK 376
+ + GF+ ++ + NAL+ MY+KCG+I DS+ FG+ + ++VSW +++ + H +
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAE 398
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
A FD+M++ G+RPD I F+++LS C AG +++ + FN+M +YGI P + Y C+V
Sbjct: 399 AVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVV 458
Query: 437 DVMSRAGQLQRACEIIR 453
D++ RAG++ A E++
Sbjct: 459 DLLGRAGKIGEAYELVE 475
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 125/435 (28%), Positives = 214/435 (49%), Gaps = 54/435 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFN------ 120
D V NS+++ Y R +FD M ++ VS+ +++ C Q+ +L EA
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 121 YFAAMPERN-AASYNAMISGF---IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE 176
++ +P+ AS A+ + K R+ A L E +V+ T ++D Y+K +
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDD 200
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA-------- 228
A A +FD M +NEVSWT MI+G V N YE +LF M ++N+
Sbjct: 201 H---AAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 229 --------------------------------STAMITGFCKQGKVDEAWTLFQQIRCRD 256
+ A +T +C+ G V + LF+ + RD
Sbjct: 258 LPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRD 317
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ W+ MI+GYA+ G E +NL +QM + G++ + + +++ +AC + LL ++
Sbjct: 318 VVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHS 377
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
++K GF S + + NAL+ MY+KCGS+ + F + ++ D+VSW+++I A+ H +
Sbjct: 378 QILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSE 437
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
A F MI G D + FL++LS C AG ++E+ +F Y +P EHYAC +
Sbjct: 438 ALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFT-QAGKYHMPVTLEHYACYI 496
Query: 437 DVMSRAGQLQRACEI 451
+++ R G++ A E+
Sbjct: 497 NLLGRFGKIDDAFEV 511
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 180/474 (37%), Gaps = 124/474 (26%)
Query: 48 SRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA--LFDAMPMKNVVSWNAM 105
S+ + A + D+ + V+ +++ Y F H+ A +FD M +KN VSW AM
Sbjct: 165 SKVARMFHALVLVDERMQESVLLSTALVDMYLK--FDDHAAAFHVFDQMEVKNEVSWTAM 222
Query: 106 VAGCVQNDMLDEAFNYFAAMPERN--------------------AASYNAMISGFIKFGR 145
++GCV N + + F AM N +S I GF F
Sbjct: 223 ISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGF-SFRH 281
Query: 146 LCDA-QRL---FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
C A +RL F M C G ++ +R LF+ R+ V W+ M
Sbjct: 282 GCHADERLTAAFMTMYC-----------------RCGNVSLSRVLFETSKVRDVVMWSSM 324
Query: 202 INGLVENGLYEEAWELFGRMPQKNVVAST------------------------------- 230
I+G E G E L +M ++ + A++
Sbjct: 325 ISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGF 384
Query: 231 --------AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
A+I + K G + A +F ++ +D+ SW+ MI Y +G G EAL +F
Sbjct: 385 MSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKG 444
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M++ G + DD+ F+++ +AC L+++ + + K+ L + + + G
Sbjct: 445 MIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGK 504
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
I D+ F+ I + ++P + SLLS
Sbjct: 505 IDDA----------------------------------FEVTINMPMKPSARIWSSLLSA 530
Query: 403 CCRAGKIDESMNLF--NLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
C G++D + + LM + P +Y L + + +G A E+ R+
Sbjct: 531 CETHGRLDVAGKIIANELMKSE---PDNPANYVLLSKIHTESGNYHAAEEVRRV 581
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 210/443 (47%), Gaps = 63/443 (14%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
N+++ Y G S+ L + +++V+WN +++ QN+ L EA Y M
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPC---------PNVVSYTVMIDGYVKVKEGGGIAR 182
IS + + R KE+ N + ++D Y K+ +
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQ---VLS 356
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF-GRMPQKNVVASTAMITG------ 235
R +FD M R W MI G +N +EA LF G ++A++ + G
Sbjct: 357 GRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACV 416
Query: 236 ---------------------------------FCKQGKVDEAWTLFQQIRCRDIASWNI 262
+ + GK+D A +F ++ RD+ +WN
Sbjct: 417 RSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNT 476
Query: 263 MITGYAQNGRGEEALNLFSQM-----------VRTGMQPDDLIFVSLFTACASLALLDQG 311
MITGY + E+AL L +M R ++P+ + +++ +CA+L+ L +G
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
++ +A IK+ +D++V +ALV MY+KCG + S F Q Q ++++WN II A+ H
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
+A M+ GV+P+ +TF+S+ + C +G +DE + +F +M DYG+ P S+H
Sbjct: 597 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH 656
Query: 432 YACLVDVMSRAGQLQRACEIIRL 454
YAC+VD++ RAG+++ A +++ +
Sbjct: 657 YACVVDLLGRAGRIKEAYQLMNM 679
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 191/460 (41%), Gaps = 44/460 (9%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY-- 78
H H V+ + V AN + + + G+ A +VFD++ ++ V+WNS++++
Sbjct: 120 HAH---VYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 176
Query: 79 ---WHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLD------EAFNYFAAMPERN 129
W + R + D + + ++V C M + + Y E N
Sbjct: 177 FEKWEMAL-EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN 235
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV---KVKEGGGIARARAL 186
+ N +++ + K G+L ++ L ++V++ ++ ++ E R L
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 187 FDAMPRRNEVSWTVMINGLVE---NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVD 243
P +S + +E G A+ L +N +A++ +C +V
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTAC 302
+F + R I WN MI GY+QN +EAL LF M + G+ + + AC
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
+ + V+K G D D V N L+ MYS+ G I + FG+ D+V+WN
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 363 TIIAA--FAQH-----VLYYK----ARSYFDQMIAVGVRPDGITFLSLLSVCC-----RA 406
T+I F++H +L +K R V ++P+ IT +++L C
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
GK + + N + D + + LVD+ ++ G LQ
Sbjct: 536 GKEIHAYAIKNNLATDVAVG------SALVDMYAKCGCLQ 569
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 83/167 (49%), Gaps = 3/167 (1%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
W ++ ++ EA+ + M+ G++PD+ F +L A A L ++ G+Q +A V
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 320 KHGFDSD-LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
K G+ D ++V N LV +Y KCG F + S+ + VSWN++I++ + A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
F M+ V P T +S+++ C + E + + VH YG+
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNL-PMPEGL-MMGKQVHAYGL 229
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 196/386 (50%), Gaps = 33/386 (8%)
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE 127
V ++ Y G+ + ++ FD + KN VSWN+++ G +++ LDEA F +PE
Sbjct: 139 VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE 198
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
++A S+N +IS + K G + +A LF MP + S+ ++I GYV +E + AR F
Sbjct: 199 KDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCRE---MKLARTYF 255
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWT 247
DAMP++N VSW MI+G + G + A ELF M +K+ + AMI + + GK +A
Sbjct: 256 DAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALK 315
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
LF Q+ R+ + +QPD++ S+ +A + L
Sbjct: 316 LFAQMLERN-----------------------------SYIQPDEITLSSVVSANSQLGN 346
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
G + + +HG D ++ +L+ +Y K G + F ++ D VS++ +I
Sbjct: 347 TSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMG 406
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
+ + +A S F MI + P+ +TF LLS +G + E FN M D+ + P
Sbjct: 407 CGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEP 465
Query: 428 RSEHYACLVDVMSRAGQLQRACEIIR 453
++HY +VD++ RAG+L+ A E+I+
Sbjct: 466 SADHYGIMVDMLGRAGRLEEAYELIK 491
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 177/377 (46%), Gaps = 45/377 (11%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
VY + +SR G I A++ FD + K+ V+WNS+L Y SG +R +FD +P
Sbjct: 139 VYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE 198
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM 156
K+ VSWN +++ + + A + F+AMP ++ AS+N +I G++ + A+ F M
Sbjct: 199 KDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAM 258
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
P N VS+ MI GY K+ G + A LF M +++++ + MI +NG ++A +
Sbjct: 259 PQKNGVSWITMISGYTKL---GDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALK 315
Query: 217 LFGRMPQKN------------VVA-----------------------------STAMITG 235
LF +M ++N VV+ ST++I
Sbjct: 316 LFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDL 375
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ K G +A+ +F + +D S++ MI G NG EA +LF+ M+ + P+ + F
Sbjct: 376 YMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTF 435
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTS 354
L +A + L+ +G + + + H + +V M + G + ++ EL
Sbjct: 436 TGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPM 495
Query: 355 QPDIVSWNTIIAAFAQH 371
QP+ W ++ A H
Sbjct: 496 QPNAGVWGALLLASGLH 512
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 144/315 (45%), Gaps = 55/315 (17%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D NL I+++++ G++ A +F MP K +WN ++ Y + + +R FDAMP
Sbjct: 200 DAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMP 259
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
KN VSW M++G + + A F M +++ Y+AMI+ + + G+ DA +LF +
Sbjct: 260 QKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQ 319
Query: 156 MPCPN----------------------------VVSY-------------TVMIDGYVKV 174
M N V SY T +ID Y+K
Sbjct: 320 MLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMK- 378
Query: 175 KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVAST 230
GG A+A +F + +++ VS++ MI G NG+ EA LF M +K NVV T
Sbjct: 379 --GGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFT 436
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRT 286
+++ + G V E + F ++ ++ + IM+ + GR EEA L M
Sbjct: 437 GLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMP-- 494
Query: 287 GMQPDDLIFVSLFTA 301
MQP+ ++ +L A
Sbjct: 495 -MQPNAGVWGALLLA 508
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 83/165 (50%), Gaps = 4/165 (2%)
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
D SW ++ +Q+ + +E ++++ M +G+ P S+ AC + + G+
Sbjct: 67 HDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPI 126
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+A +K+G + V LV +YS+ G I ++ AF ++ + VSWN+++ + +
Sbjct: 127 HAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGEL 186
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+AR FD++ D +++ ++S + G + + +LF+ M
Sbjct: 187 DEARRVFDKI----PEKDAVSWNLIISSYAKKGDMGNACSLFSAM 227
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 216/443 (48%), Gaps = 27/443 (6%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF-- 91
S V+ N+ I +S+ G + A +FD+ +D V+WNS+++ Y G + L
Sbjct: 180 SQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAK 239
Query: 92 ---DAMPMKNVVSWNAMVAGCVQNDMLDEAF--------NYFAAMP-ERNAASYNAMISG 139
D + + + + A C+ L+E F Y A + E + A++
Sbjct: 240 MHRDGLNLTTYALGSVLKACCIN---LNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDM 296
Query: 140 FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARA--LFDAMPRR---- 193
+ K G L +A +LF MP NVV+Y MI G++++ E A + A LF M RR
Sbjct: 297 YAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEP 356
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA----STAMITGFCKQGKVDEAWTLF 249
+ +++V++ E ++ + + N + +A+I + G ++ F
Sbjct: 357 SPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCF 416
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
+DIASW MI + QN + E A +LF Q+ + ++P++ + +ACA A L
Sbjct: 417 ASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALS 476
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFA 369
G Q IK G D+ SV + ++MY+K G++ + F + PD+ +++ +I++ A
Sbjct: 477 SGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLA 536
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRS 429
QH +A + F+ M G++P+ FL +L CC G + + + F M +DY I P
Sbjct: 537 QHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNE 596
Query: 430 EHYACLVDVMSRAGQLQRACEII 452
+H+ CLVD++ R G+L A +I
Sbjct: 597 KHFTCLVDLLGRTGRLSDAENLI 619
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 177/398 (44%), Gaps = 79/398 (19%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDML 115
ARQ+FD+MP ++++++NS+++ Y GF + + LF N+ L
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANL--------------KL 146
Query: 116 DEAFNYFAAM---PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV 172
D+ F Y A+ ER ++ G + L +Q++F V+ID Y
Sbjct: 147 DK-FTYAGALGFCGERCDLDLGELLHGLVVVNGL--SQQVFL---------INVLIDMYS 194
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK-------- 224
K G + +A +LFD R++VSW +I+G V G EE L +M +
Sbjct: 195 KC---GKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYA 251
Query: 225 ----------------------------------NVVASTAMITGFCKQGKVDEAWTLFQ 250
++V TA++ + K G + EA LF
Sbjct: 252 LGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFS 311
Query: 251 QIRCRDIASWNIMITGYAQ-----NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+ +++ ++N MI+G+ Q + EA LF M R G++P F + AC++
Sbjct: 312 LMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAA 371
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L+ GRQ +AL+ K+ F SD + +AL+ +Y+ GS D F TS+ DI SW ++I
Sbjct: 372 KTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMI 431
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
Q+ A F Q+ + +RP+ T ++S C
Sbjct: 432 DCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSAC 469
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 127/287 (44%), Gaps = 50/287 (17%)
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA-- 228
Y K +E G AR LFD MP RN +S+ +I+G + G YE+A ELF + N+
Sbjct: 92 YCKCRELG---FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDK 148
Query: 229 -STAMITGFC------------------------------------KQGKVDEAWTLFQQ 251
+ A GFC K GK+D+A +LF +
Sbjct: 149 FTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR 208
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA---SLALL 308
RD SWN +I+GY + G EE LNL ++M R G+ S+ AC + +
Sbjct: 209 CDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI 268
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
++G + K G + D+ V AL+ MY+K GS+ ++ F ++V++N +I+ F
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF 328
Query: 369 AQ-----HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
Q +A F M G+ P TF +L C A ++
Sbjct: 329 LQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLE 375
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 164/364 (45%), Gaps = 30/364 (8%)
Query: 29 AKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH-----SGF 83
AK +D+ + +++ G++ A ++F MP+K+VVT+N+M++ +
Sbjct: 279 AKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEA 338
Query: 84 PQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNA 135
+ LF M + + +++ ++ C L+ A + + N S +A
Sbjct: 339 SSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSA 398
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE-GGGIARARALFDAMPRRN 194
+I + G D + F ++ S+T MID +V+ ++ R LF + R
Sbjct: 399 LIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPE 458
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA----STAMITGFCKQGKVDEAWTLFQ 250
E + ++M++ + ++ G + + A T+ I+ + K G + A +F
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
+++ D+A+++ MI+ AQ+G EALN+F M G++P+ F+ + AC L+ Q
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQ 578
Query: 311 GRQTYALVIKHGFDSDLSVN------NALVTMYSKCGSIVDSE-LAFGQTSQPDIVSWNT 363
G + + + +D +N LV + + G + D+E L Q V+W
Sbjct: 579 GLKYFQCM-----KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRA 633
Query: 364 IIAA 367
++++
Sbjct: 634 LLSS 637
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 106/225 (47%), Gaps = 10/225 (4%)
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+CK ++ A LF ++ R+I S+N +I+GY Q G E+A+ LF + ++ D +
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
C LD G + LV+ +G + + N L+ MYSKCG + + F + +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC---RAGKIDES 412
D VSWN++I+ + + + + +M G+ S+L CC G I++
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 413 MNLFNLMVH---DYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
M + ++ I R+ L+D+ ++ G L+ A ++ L
Sbjct: 272 MAIHCYTAKLGMEFDIVVRT----ALLDMYAKNGSLKEAIKLFSL 312
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 133/450 (29%), Positives = 225/450 (50%), Gaps = 21/450 (4%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H L+V + + D Y+ N I + + AR++FD MP ++VV+W +M+ Y +
Sbjct: 54 HAH-LIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQN 112
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVA-----GCVQNDMLDEAFNYFAAMPERNAASYNA 135
SGF LF +M N VA C + ++E + + S+
Sbjct: 113 SGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEF 172
Query: 136 MISGFIKFGRLC----DAQRLFKEMPCPNVVSYTVMIDGYVKV---KEGGGIARARALFD 188
+ + + LC +A R+ ++P ++ ++ + GY++ KEG + R A D
Sbjct: 173 VRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANED 232
Query: 189 AM-PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVD 243
+ +S + + L + L A ++ RM + V A A+I + K GKV
Sbjct: 233 FVWNNLTYLSSLRLFSNLRDLNL---ALQVHSRMVRFGFNAEVEACGALINMYGKCGKVL 289
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
A +F ++I ++ Y Q+ EEALNLFS+M + P++ F L + A
Sbjct: 290 YAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIA 349
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNT 363
L+LL QG + LV+K G+ + + V NALV MY+K GSI D+ AF + DIV+WNT
Sbjct: 350 ELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNT 409
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY 423
+I+ + H L +A FD+MI G P+ ITF+ +L C G +++ ++ FN ++ +
Sbjct: 410 MISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKF 469
Query: 424 GIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ P +HY C+V ++S+AG + A + +R
Sbjct: 470 DVQPDIQHYTCIVGLLSKAGMFKDAEDFMR 499
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/440 (28%), Positives = 206/440 (46%), Gaps = 40/440 (9%)
Query: 18 TARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTA 77
T + H +V S+ V + A+ S G + A ++FD++P DV N +L
Sbjct: 27 TLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 78 YWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY 133
S P+ + +L+ M + V ++ ++ C + + F + +
Sbjct: 87 SAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLN 146
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
+ + I F C G + A LFD +
Sbjct: 147 EYVKNALILFHANC------------------------------GDLGIASELFDDSAKA 176
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIR 253
++V+W+ M +G + G +EA LF MP K+ VA MITG K ++D A LF +
Sbjct: 177 HKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFT 236
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
+D+ +WN MI+GY G +EAL +F +M G PD + +SL +ACA L L+ G++
Sbjct: 237 EKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKR 296
Query: 314 TYALVIKHG-FDSDLSVN----NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+ +++ S + V NAL+ MY+KCGSI + F D+ +WNT+I
Sbjct: 297 LHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGL 356
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
A H + F++M + V P+ +TF+ ++ C +G++DE F+LM Y I P
Sbjct: 357 ALHHA-EGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPN 415
Query: 429 SEHYACLVDVMSRAGQLQRA 448
+HY C+VD++ RAGQL+ A
Sbjct: 416 IKHYGCMVDMLGRAGQLEEA 435
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 121/417 (29%), Positives = 210/417 (50%), Gaps = 55/417 (13%)
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMI---SG 139
+R +FD +P + WNA++ G +N+ +A ++ M ++ ++ ++ SG
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131
Query: 140 F--IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP--RRNE 195
++ GR AQ +F+ +V +I Y K + G AR +F+ +P R
Sbjct: 132 LSHLQMGRFVHAQ-VFRLGFDADVFVQNGLIALYAKCRRLGS---ARTVFEGLPLPERTI 187
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGF--------------- 236
VSWT +++ +NG EA E+F +M + +V VA +++ F
Sbjct: 188 VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHAS 247
Query: 237 --------------------CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
K G+V A LF +++ ++ WN MI+GYA+NG EA
Sbjct: 248 VVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREA 307
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+++F +M+ ++PD + S +ACA + L+Q R Y V + + D+ +++AL+ M
Sbjct: 308 IDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDM 367
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
++KCGS+ + L F +T D+V W+ +I + H +A S + M GV P+ +TF
Sbjct: 368 FAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTF 427
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
L LL C +G + E FN M D+ I P+ +HYAC++D++ RAG L +A E+I+
Sbjct: 428 LGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIK 483
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 208/410 (50%), Gaps = 25/410 (6%)
Query: 57 RQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLD 116
R V +V+ +S+L + P +S ++F +N NA++ G +N +
Sbjct: 55 RGVLSSRVAAQLVSCSSLLKS------PDYSLSIFRNSEERNPFVLNALIRGLTENARFE 108
Query: 117 EAFNYFAAM------PERNAASY----NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
+ +F M P+R + N+ + GF GR A L + C + V +
Sbjct: 109 SSVRHFILMLRLGVKPDRLTFPFVLKSNSKL-GFRWLGRALHAATLKNFVDCDSFVRLS- 166
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNE----VSWTVMINGLVENGLYEEAWELFGRMP 222
++D Y K G + A +F+ P R + + W V+ING A LF MP
Sbjct: 167 LVDMYAKT---GQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMP 223
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
++N + + +I G+ G+++ A LF+ + +++ SW +I G++Q G E A++ + +
Sbjct: 224 ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFE 283
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M+ G++P++ ++ +AC+ L G + + ++ +G D ++ ALV MY+KCG
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGE 343
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ + F + DI+SW +I +A H +++A F QM+ G +PD + FL++L+
Sbjct: 344 LDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTA 403
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C + ++D +N F+ M DY I P +HY +VD++ RAG+L A E++
Sbjct: 404 CLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELV 453
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 54/371 (14%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCV-----QNDMLDEAFNY 121
D +T+ +L + GF RAL A +KN V ++ V + + L AF
Sbjct: 125 DRLTFPFVLKSNSKLGFRWLGRALH-AATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQV 183
Query: 122 FAAMPERNAAS----YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
F P+R +N +I+G+ + + A LF+ MP N S++ +I GYV +
Sbjct: 184 FEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYV---DS 240
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------GRMPQKNVVAS-- 229
G + RA+ LF+ MP +N VSWT +ING + G YE A + G P + +A+
Sbjct: 241 GELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVL 300
Query: 230 -------------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
TA++ + K G++D A T+F + +DI
Sbjct: 301 SACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL 360
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-AL 317
SW MI G+A +GR +A+ F QM+ +G +PD+++F+++ TAC + + +D G + ++
Sbjct: 361 SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSM 420
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
+ + + L +V + + G + ++ EL PD+ +W + A H Y +
Sbjct: 421 RLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRR 480
Query: 377 ARSYFDQMIAV 387
A S ++ +
Sbjct: 481 AESVSQNLLEL 491
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 127/282 (45%), Gaps = 25/282 (8%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N+ I + RA ++ A +F MP ++ +W++++ Y SG ++ LF+ MP KNVV
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV 259
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEM 156
SW ++ G Q + A + + M E+ N + A++S K G L R+ +
Sbjct: 260 SWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYI 319
Query: 157 PCPNVVSY-----TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
N + T ++D Y K G + A +F M ++ +SWT MI G +G +
Sbjct: 320 -LDNGIKLDRAIGTALVDMYAKC---GELDCAATVFSNMNHKDILSWTAMIQGWAVHGRF 375
Query: 212 EEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNI 262
+A + F +M + + V A++T +VD F +R + + +
Sbjct: 376 HQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVL 435
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
++ + G+ EA L M + PD + +L+ AC +
Sbjct: 436 VVDLLGRAGKLNEAHELVENM---PINPDLTTWAALYRACKA 474
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 195/394 (49%), Gaps = 42/394 (10%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D NS++ Y G + + +FD MP ++VVSWN +++ V N ++A F M
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMS 139
Query: 127 ERNAASYN-----AMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV---MIDGYVKVKEGG 178
+ + ++ + +S L +R+++ + +S + ++D + K G
Sbjct: 140 QESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKC---G 196
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCK 238
+ +ARA+FD+M +N WT M+ G V G +EA LF R P K+VV TAM+ G+ +
Sbjct: 197 CLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQ 256
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
+ DEA LF RC M G++PD+ + VSL
Sbjct: 257 FNRFDEALELF---RC----------------------------MQTAGIRPDNFVLVSL 285
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
T CA L+QG+ + + ++ D V ALV MY+KCG I + F + + D
Sbjct: 286 LTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDT 345
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
SW ++I A + + +A + +M VGVR D ITF+++L+ C G + E +F+
Sbjct: 346 ASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHS 405
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
M + + P+SEH +CL+D++ RAG L A E+I
Sbjct: 406 MTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELI 439
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 171/362 (47%), Gaps = 51/362 (14%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
+D Y +N + ++ G I +VFD+MP +DVV+WN ++++Y +G + + +F
Sbjct: 78 EFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKR 137
Query: 94 MPMKNVVSWN-----AMVAGC--VQNDMLDEAFNYFAAMP-ERNAASYNAMISGFIKFGR 145
M ++ + ++ + ++ C ++N + E F E + NA++ F K G
Sbjct: 138 MSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGC 197
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
L A+ +F M NV +T M+ GYV G I AR LF+ P ++ V WT M+NG
Sbjct: 198 LDKARAVFDSMRDKNVKCWTSMVFGYVST---GRIDEARVLFERSPVKDVVLWTAMMNGY 254
Query: 206 VENGLYEEAWELF------GRMPQKNVVAS------------------------------ 229
V+ ++EA ELF G P V+ S
Sbjct: 255 VQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDK 314
Query: 230 ---TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
TA++ + K G ++ A +F +I+ RD ASW +I G A NG AL+L+ +M
Sbjct: 315 VVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENV 374
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
G++ D + FV++ TAC + +GR+ + ++ +H + L+ + + G + +
Sbjct: 375 GVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDE 434
Query: 346 SE 347
+E
Sbjct: 435 AE 436
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 90/190 (47%), Gaps = 3/190 (1%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
+N M+ A + L LF ++ G+ PD+ + + L + +G + + +
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K G + D V+N+L+ MY+ G I + F + Q D+VSWN +I+++ + + A
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIG 133
Query: 380 YFDQMI-AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F +M ++ D T +S LS C ++ ++ +V ++ + R + LVD+
Sbjct: 134 VFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDM 191
Query: 439 MSRAGQLQRA 448
+ G L +A
Sbjct: 192 FCKCGCLDKA 201
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 168/313 (53%), Gaps = 39/313 (12%)
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW----------------------- 215
GI R +F+ MPR++ VS+ +I G ++G+YE+A
Sbjct: 191 GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP 250
Query: 216 ------------ELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
E+ G + +K +V ++++ + K +++++ +F ++ CRD S
Sbjct: 251 IFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS 310
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN ++ GY QNGR EAL LF QMV ++P + F S+ ACA LA L G+Q + V+
Sbjct: 311 WNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVL 370
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+ GF S++ + +ALV MYSKCG+I + F + + D VSW II A H ++A S
Sbjct: 371 RGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVS 430
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F++M GV+P+ + F+++L+ C G +DE+ FN M YG+ EHYA + D++
Sbjct: 431 LFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLL 490
Query: 440 SRAGQLQRACEII 452
RAG+L+ A I
Sbjct: 491 GRAGKLEEAYNFI 503
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 174/394 (44%), Gaps = 65/394 (16%)
Query: 36 DVYRANLNIAAFSR---AGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFP---QHSRA 89
D+Y N + +++ G+ + VFD+MP + + + + A P R
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET-CIMPFGIDSVRR 197
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIK-FGRLCD 148
+F+ MP K+VVS+N ++AG Q+ M ++A M + + +S + F D
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 149 AQR-------LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVM 201
+ + ++ +V + ++D Y K I + +F + R+ +SW +
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK---SARIEDSERVFSRLYCRDGISWNSL 314
Query: 202 INGLVENGLYEEAWELFGRMPQ-------------------------------------- 223
+ G V+NG Y EA LF +M
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 224 -KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
N+ ++A++ + K G + A +F ++ D SW +I G+A +G G EA++LF +
Sbjct: 375 GSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEE 434
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCG 341
M R G++P+ + FV++ TAC+ + L+D+ + + K +G + +L A+ + + G
Sbjct: 435 MKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG 494
Query: 342 SIVDSELAFGQTS----QPDIVSWNTIIAAFAQH 371
+ E A+ S +P W+T++++ + H
Sbjct: 495 KL---EEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 36/190 (18%)
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F+ ++ + +W +I + +AL F +M +G PD +F S+ +C + L
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSK---------CGSIVDSE------------ 347
G + +++ G D DL NAL+ MY+K G++ D
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 348 ------LAFGQTS---------QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
+ FG S + D+VS+NTIIA +AQ +Y A +M ++PD
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 393 GITFLSLLSV 402
T S+L +
Sbjct: 242 SFTLSSVLPI 251
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+++ A+ + +S+ GNI AAR++FD+M D V+W +++ + G + +LF+ M
Sbjct: 377 NIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPE-----RNAASYNAMISGFIKFGRL 146
+ V V++ A++ C ++DEA+ YF +M + + Y A+ + G+L
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKL 496
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMING 204
+A +M S + V + +A A +F + N ++ +M N
Sbjct: 497 EEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIF-TVDSENMGAYVLMCNM 555
Query: 205 LVENGLYEEAWELFGRMPQKNV 226
NG ++E +L RM +K +
Sbjct: 556 YASNGRWKEMAKLRLRMRKKGL 577
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 223/451 (49%), Gaps = 23/451 (5%)
Query: 22 THFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS 81
+ F + K + +++ N + +++ G + ARQ+F++M +D VTWN+++ +Y
Sbjct: 448 SQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQD 507
Query: 82 GFPQHSRALFDAMPMKNVVSWNAMVA----GCVQNDMLDEAFNYFAAMP----ERNAASY 133
+ LF M + +VS A +A C L + +R+ +
Sbjct: 508 ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTG 567
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
+++I + K G + DA+++F +P +VVS +I GY + + A LF M R
Sbjct: 568 SSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ----NNLEEAVVLFQEMLTR 623
Query: 194 ----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDE 244
+E+++ ++ + + G++ ++ + +++ + + E
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTE 683
Query: 245 AWTLFQQIRC-RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
A LF ++ + I W M++G++QNG EEAL + +M G+ PD FV++ C+
Sbjct: 684 ACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCS 743
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ-PDIVSWN 362
L+ L +GR ++L+ D D +N L+ MY+KCG + S F + + ++VSWN
Sbjct: 744 VLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWN 803
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
++I +A++ A FD M + PD ITFL +L+ C AGK+ + +F +M+
Sbjct: 804 SLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQ 863
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
YGI R +H AC+VD++ R G LQ A + I
Sbjct: 864 YGIEARVDHVACMVDLLGRWGYLQEADDFIE 894
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 210/488 (43%), Gaps = 81/488 (16%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFP----QHSRALFDAMP 95
N + +++ ++ A + FD + KDV WNSML+ Y G P + +LF+
Sbjct: 98 GNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQI 156
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR 151
N +++ +++ C + ++ +M ERN+ A++ + K R+ DA+R
Sbjct: 157 FPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 152 LFKEMPCPNVVSYTVMIDGYVKV--------------KEG------------------GG 179
+F+ + PN V +T + GYVK EG G
Sbjct: 217 VFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGK 276
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK--------------- 224
+ AR LF M + V+W VMI+G + G A E F M +
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 225 ------------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
N+ +++++ + K K++ A +F+ + ++ W
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
N MI GYA NG + + LF M +G DD F SL + CA+ L+ G Q ++++IK
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
+L V NALV MY+KCG++ D+ F + D V+WNTII ++ Q +A
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
F +M G+ DG S L C + + + L V G+ + L+D+ S
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV-KCGLDRDLHTGSSLIDMYS 575
Query: 441 RAGQLQRA 448
+ G ++ A
Sbjct: 576 KCGIIKDA 583
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 198/483 (40%), Gaps = 90/483 (18%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
SI++S + T R H ++ K + Y + +++ I+ AR+VF+ +
Sbjct: 164 SIVLSTCARETNVEFGRQIHCSMI--KMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHS-----------------------------------R 88
+ V W + + Y +G P+ + R
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 89 ALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIK------ 142
LF M +VV+WN M++G + A YF M + + S + + +
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 143 ---FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT 199
G + A+ + K N+ + ++ Y K ++ + A +F+A+ +N+V W
Sbjct: 342 NLDLGLVVHAEAI-KLGLASNIYVGSSLVSMYSKCEK---MEAAAKVFEALEEKNDVFWN 397
Query: 200 VMINGLVENGLYEEAWELFGRMPQ------------------------------------ 223
MI G NG + ELF M
Sbjct: 398 AMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKK 457
Query: 224 ---KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
KN+ A++ + K G +++A +F+++ RD +WN +I Y Q+ EA +LF
Sbjct: 458 KLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLF 517
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
+M G+ D S AC + L QG+Q + L +K G D DL ++L+ MYSKC
Sbjct: 518 KRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC 577
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G I D+ F + +VS N +IA ++Q+ L +A F +M+ GV P ITF +++
Sbjct: 578 GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIV 636
Query: 401 SVC 403
C
Sbjct: 637 EAC 639
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
++R +FD MP+R ++ + I V + + GR+ A++ + K +
Sbjct: 60 KSRKVFDEMPQR--LALALRIGKAVHSKSLILGIDSEGRL-------GNAIVDLYAKCAQ 110
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
V A F + +D+ +WN M++ Y+ G+ + L F + + P+ F + +
Sbjct: 111 VSYAEKQFDFLE-KDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLST 169
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
CA ++ GRQ + +IK G + + ALV MY+KC I D+ F P+ V W
Sbjct: 170 CARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCW 229
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+ + + + L +A F++M G RPD + F+++++ R GK+ ++ LF M
Sbjct: 230 TCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/442 (30%), Positives = 224/442 (50%), Gaps = 30/442 (6%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+VY + + +++ + A + F ++ + V+WN+++ + + + L M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAF-NYFAAMP--------ERNAASYNAMISGFIKFGRL 146
MK V+ +A + + D F N + + NAMIS + G +
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 147 CDAQRLFKEMP-CPNVVSYTVMIDGYVK--VKEGGGIARARALFDAMPRRNEVSWTVMIN 203
DA+R+F + +++S+ MI G+ K +KE A LF M R +
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKES-----AFELFIQMQRHWVETDIYTYT 309
Query: 204 GLVENGLYEEAWELFGRMPQKNVV---------ASTAMITGFCK--QGKVDEAWTLFQQI 252
GL+ EE ++FG+ V+ A+ A+I+ + + G +++A +LF+ +
Sbjct: 310 GLLSACSGEEH-QIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESL 368
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
+ +D+ SWN +ITG+AQ G E+A+ FS + + ++ DD F +L +C+ LA L G+
Sbjct: 369 KSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ 428
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ-TSQPDIVSWNTIIAAFAQH 371
Q +AL K GF S+ V ++L+ MYSKCG I + F Q +S+ V+WN +I +AQH
Sbjct: 429 QIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQH 488
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
L + F QM V+ D +TF ++L+ C G I E + L NLM Y I PR EH
Sbjct: 489 GLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEH 548
Query: 432 YACLVDVMSRAGQLQRACEIIR 453
YA VD++ RAG + +A E+I
Sbjct: 549 YAAAVDLLGRAGLVNKAKELIE 570
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 184/388 (47%), Gaps = 23/388 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+Y +N + ++ + G + A +FD+MP +D V+WN+M++ Y G + + LF M
Sbjct: 34 DIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMK 93
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLC 147
+ S++ ++ G D + E N ++++ + K R+
Sbjct: 94 RSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVE 153
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS---------W 198
DA FKE+ PN VS+ +I G+V+V++ I A L M + V+
Sbjct: 154 DAFEAFKEISEPNSVSWNALIAGFVQVRD---IKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQI-RCRDI 257
T++ + + N L + ++ Q + AMI+ + G V +A +F + +D+
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SWN MI G++++ E A LF QM R ++ D + L +AC+ G+ + +
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGM 330
Query: 318 VIKHGFDSDLSVNNALVTMYSK--CGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
VIK G + S NAL++MY + G++ D+ F D++SWN+II FAQ L
Sbjct: 331 VIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSE 390
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVC 403
A +F + + ++ D F +LL C
Sbjct: 391 DAVKFFSYLRSSEIKVDDYAFSALLRSC 418
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 194/419 (46%), Gaps = 62/419 (14%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMP-TKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
+++ N I++++ G+++ A++VFD + +KD+++WNSM+ + + + LF
Sbjct: 236 HEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQ 295
Query: 94 MPMK----NVVSWNAMVAGCV--QNDMLDEAFNYFAAMP--ERNAASYNAMISGFIKF-- 143
M ++ ++ +++ C ++ + ++ + E+ ++ NA+IS +I+F
Sbjct: 296 MQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPT 355
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV-----SW 198
G + DA LF+ + +++S+ +I G+ + G++ F + R +E+ ++
Sbjct: 356 GTMEDALSLFESLKSKDLISWNSIITGFAQ----KGLSEDAVKFFSYLRSSEIKVDDYAF 411
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQIRC 254
+ ++ + + ++ + V++ +++I + K G ++ A FQQI
Sbjct: 412 SALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISS 471
Query: 255 R-DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
+ +WN MI GYAQ+G G+ +L+LFSQM ++ D + F ++ TAC+ L+ +G
Sbjct: 472 KHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEG-- 529
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
L + N + +Y QP + + + + L
Sbjct: 530 -------------LELLNLMEPVYK---------------IQPRMEHYAAAVDLLGRAGL 561
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
KA+ + M + PD + + L VC G+I+ + + N H I P +H+
Sbjct: 562 VNKAKELIESM---PLNPDPMVLKTFLGVCRACGEIEMATQVAN---HLLEIEPE-DHF 613
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 148/535 (27%), Positives = 242/535 (45%), Gaps = 115/535 (21%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH 86
V FSS D Y ++ + +++ G + AR+VF++M +DVV W +M+ Y +G
Sbjct: 72 VLVNGFSS-DFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGE 130
Query: 87 SRALFDAMPMKNV----VSWNAMVAG-----------------------CVQNDMLD--- 116
+ +L + M + + V+ M++G V N ML+
Sbjct: 131 ACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 117 ------EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP------------- 157
+A + F M +R+ S+N MISG+ G + + +L M
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGA 250
Query: 158 --------CP---------NVVSYTVMIDGYVK-------VKEGGGIARARALFDAMPRR 193
C +V +D ++K +K G A R L + +P +
Sbjct: 251 SLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL-ETIPNK 309
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQK----------NVVASTA------------ 231
+ V WTVMI+GL+ G E+A +F M Q +VVAS A
Sbjct: 310 DVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVH 369
Query: 232 -----------------MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
+IT + K G +D++ +F+++ RD+ SWN +I+GYAQN
Sbjct: 370 GYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLC 429
Query: 275 EALNLFSQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
+AL LF +M +T Q D VSL AC+S L G+ + +VI+ V+ AL
Sbjct: 430 KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTAL 489
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
V MYSKCG + ++ F S D+VSW +IA + H A + + + G+ P+
Sbjct: 490 VDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNH 549
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ FL++LS C G + + + +F+ MV D+G+ P EH AC+VD++ RA +++ A
Sbjct: 550 VIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDA 604
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 158/326 (48%), Gaps = 15/326 (4%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP-- 191
+++++ + KFG L A+++F+EM +VV +T MI Y + G + A +L + M
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSR---AGIVGEACSLVNEMRFQ 141
Query: 192 --RRNEVSWTVMINGLVE----NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEA 245
+ V+ M++G++E L++ A ++G ++ +M+ +CK V +A
Sbjct: 142 GIKPGPVTLLEMLSGVLEITQLQCLHDFAV-IYGF--DCDIAVMNSMLNLYCKCDHVGDA 198
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
LF Q+ RD+ SWN MI+GYA G E L L +M G++PD F + + ++
Sbjct: 199 KDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTM 258
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L+ GR + ++K GFD D+ + AL+TMY KCG S D+V W +I
Sbjct: 259 CDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMI 318
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+ + KA F +M+ G S+++ C + G D ++ ++ +G
Sbjct: 319 SGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLR-HGY 377
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEI 451
+ L+ + ++ G L ++ I
Sbjct: 378 TLDTPALNSLITMYAKCGHLDKSLVI 403
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
+N I + +G ++ L+ FS M+ + PD F SL ACASL L G + V+
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+GF SD ++++LV +Y+K G + + F + + D+V W +I +++ + +A S
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACS 133
Query: 380 YFDQMIAVGVRPDGITFLSLLS 401
++M G++P +T L +LS
Sbjct: 134 LVNEMRFQGIKPGPVTLLEMLS 155
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 224/493 (45%), Gaps = 48/493 (9%)
Query: 7 VSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTK 66
+S K H L+V K + D++ N + ++ G + +AR+VFD+M +
Sbjct: 141 LSACAKSRAKGNGIQIHGLIV--KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALF-----DAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
+VV+W SM+ Y F + + LF D N V+ +++ C + + L+
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDA----QRLFKEMPCPNVVSYTVMIDGYVK---V 174
+A + + M+S + C+A +RLF E N+ M YV+
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT 318
Query: 175 KEGGG--------------IARARALFDAMPRRNEV---------------SWTVMINGL 205
+E G I+ A+ RN + SW + N L
Sbjct: 319 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378
Query: 206 VENGL----YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
++ + + A+ +F RM K VV +++ G+ + G+VD AW F+ + ++I SWN
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438
Query: 262 IMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+I+G Q EEA+ +F M + G+ D + +S+ +AC L LD + Y + K
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
+G D+ + LV M+S+CG + F + D+ +W I A A +A
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
FD MI G++PDG+ F+ L+ C G + + +F M+ +G+ P HY C+VD++
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618
Query: 441 RAGQLQRACEIIR 453
RAG L+ A ++I
Sbjct: 619 RAGLLEEAVQLIE 631
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 2/180 (1%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
+N +I GYA +G EA+ LF +M+ +G+ PD F +ACA G Q + L++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K G+ DL V N+LV Y++CG + + F + S+ ++VSW ++I +A+ A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 380 YFDQMIA-VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F +M+ V P+ +T + ++S C + ++ ++ + + GI + LVD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSALVDM 280
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 136/294 (46%), Gaps = 25/294 (8%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH 86
V F S+D N I + + A ++FD+M K VVTWNS++ Y +G
Sbjct: 363 VLRNGFESWDNI-CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN-----AMISGFI 141
+ F+ MP KN+VSWN +++G VQ + +EA F +M + + + ++ S
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 142 KFGRLCDAQRLF----KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS 197
G L A+ ++ K +V T ++D + + G A ++F+++ R+ +
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC---GDPESAMSIFNSLTNRDVSA 538
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLF-QQI 252
WT I + G E A ELF M ++ + VA +T G V + +F +
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 253 RCRDIASWNI----MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ ++ ++ M+ + G EEA+ L M M+P+D+I+ SL AC
Sbjct: 599 KLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAAC 649
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 176/330 (53%), Gaps = 8/330 (2%)
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEG----GGIARA 183
S+ + I+ + GRL +A + F +M PN +++ ++ G G G +
Sbjct: 38 SWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHG 97
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVD 243
A + R + + T +I + G +++A +F M KN V MI G+ + G+VD
Sbjct: 98 YACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVD 157
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
A +F ++ RD+ SW MI G+ + G EEAL F +M +G++PD + ++ AC
Sbjct: 158 NAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACT 217
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNT 363
+L L G + V+ F +++ V+N+L+ +Y +CG + + F + +VSWN+
Sbjct: 218 NLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNS 277
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY 423
+I FA + +++ YF +M G +PD +TF L+ C G ++E + F +M DY
Sbjct: 278 VIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDY 337
Query: 424 GIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
I PR EHY CLVD+ SRAG+L+ A ++++
Sbjct: 338 RISPRIEHYGCLVDLYSRAGRLEDALKLVQ 367
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 136/279 (48%), Gaps = 25/279 (8%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
I +S+ G AR VFD M K+ VTWN+M+ Y SG ++ +FD MP ++++SW
Sbjct: 116 IGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWT 175
Query: 104 AMVAGCVQNDMLDEAFNYFAAM------PERNA--ASYNAMIS-GFIKFGRLCDAQRLFK 154
AM+ G V+ +EA +F M P+ A A+ NA + G + FG L +
Sbjct: 176 AMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQ 235
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEA 214
+ NV +ID Y + G + AR +F M +R VSW +I G NG E+
Sbjct: 236 DFK-NNVRVSNSLIDLYCRC---GCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHES 291
Query: 215 WELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMIT 265
F +M +K + V T +T G V+E FQ ++C I + ++
Sbjct: 292 LVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVD 351
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
Y++ GR E+AL L M M+P++++ SL AC++
Sbjct: 352 LYSRAGRLEDALKLVQSMP---MKPNEVVIGSLLAACSN 387
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 212/464 (45%), Gaps = 58/464 (12%)
Query: 44 IAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+ A S++ N RQ+ + D S+L+ Y G + +F + K +
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMIS---------GFIKFGRLCDAQ 150
WNAMVA +ND A + F M +++ + +S G +G+ A+
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
LFK + ++ Y K G A +F +M ++ V+W +I+GL +NG
Sbjct: 399 -LFKRPIQSTSTIESALLTLYSKC---GCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGK 454
Query: 211 YEEAWELFGRMPQK-----------------------------------------NVVAS 229
++EA ++FG M NV
Sbjct: 455 FKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVG 514
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
+++I + K G + A +F + ++ +WN MI+ Y++N E +++LF+ M+ G+
Sbjct: 515 SSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIF 574
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
PD + S+ A +S A L +G+ + ++ G SD + NAL+ MY KCG +E
Sbjct: 575 PDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENI 634
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F + +++WN +I + H A S FD+M G PD +TFLSL+S C +G +
Sbjct: 635 FKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFV 694
Query: 410 DESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+E N+F M DYGI P EHYA +VD++ RAG L+ A I+
Sbjct: 695 EEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIK 738
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 199/457 (43%), Gaps = 56/457 (12%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDK-------MPTKDVVTWNSMLTAY-----WHSG 82
YD + A + + + G + A QVFD + +DV WNSM+ Y + G
Sbjct: 93 YDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEG 152
Query: 83 FPQHSRALF-----DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN--- 134
R L DA + VVS C + + E RN+ +
Sbjct: 153 VGCFRRMLVFGVRPDAFSLSIVVS-----VMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 135 --AMISGFIKFGRLCDAQRLFKEMP-CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
A+I + KFG DA R+F E+ NVV + VMI G+ G GI + +
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGF----GGSGICESSLDLYMLA 263
Query: 192 RRNEVSW--TVMINGLVENGLYEEAWELFGRMPQKNVV---------ASTAMITGFCKQG 240
+ N V T L E + FGR +VV T++++ + K G
Sbjct: 264 KNNSVKLVSTSFTGALGACSQSENSG--FGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
V EA T+F + + + WN M+ YA+N G AL+LF M + + PD ++ +
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
C+ L L + G+ +A + K S ++ +AL+T+YSKCG D+ L F + D+V+
Sbjct: 382 CCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVA 441
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMI--AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
W ++I+ ++ + +A F M ++PD S+ + C AG E++ F L
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNAC--AGL--EALR-FGL 496
Query: 419 MVH----DYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
VH G+ + L+D+ S+ G + A ++
Sbjct: 497 QVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKV 533
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP---DDLIFVSLFTACASLALLDQGRQT 314
AS N I Q G +AL+L+S+ G P F SL AC++L L G+
Sbjct: 25 ASINSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTI 82
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP-------DIVSWNTIIAA 367
+ V+ G+ D + +LV MY KCG + + F SQ D+ WN++I
Sbjct: 83 HGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDG 142
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
+ + + + F +M+ GVRPD + ++SV C+ G
Sbjct: 143 YFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEG 182
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 191 bits (486), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/494 (26%), Positives = 236/494 (47%), Gaps = 52/494 (10%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
S +V+ +L + A+ H L+ A + Y N + + ++G++ A Q+FD +
Sbjct: 8 SRLVNRSLLSKSPTLAKIVHAQLLEAGFVRT--TYWGNRCLQLYFKSGSVINALQLFDDI 65
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
P K+ +TWN L + +G+ ++ LFD MP ++VVSWN M++G V + F
Sbjct: 66 PDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFF 125
Query: 124 AM------PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
M P S A + ++ G + + N+V + ++D Y ++
Sbjct: 126 DMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRL--- 182
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ-------------- 223
G A ++F M R+ VSW +I ++G E A + F M +
Sbjct: 183 GVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVV 242
Query: 224 -------------------------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
N + A I F K ++D++ LF+++ D
Sbjct: 243 SICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSV 302
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
N MI Y+ + GE+AL LF + ++PD F S+ ++ ++ +LD G ++LV
Sbjct: 303 LCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLV 361
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
IK GFD D +V +L+ MY K GS+ + F +T D++ WNT+I A++ ++
Sbjct: 362 IKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESL 421
Query: 379 SYFDQMIA-VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+ F+Q++ ++PD +T + +L CC AG ++E + +F+ M +G+ P +EHYAC+++
Sbjct: 422 AIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIE 481
Query: 438 VMSRAGQLQRACEI 451
++ R G + A +I
Sbjct: 482 LLCRVGMINEAKDI 495
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 110/249 (44%), Gaps = 7/249 (2%)
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
++G A +LF +P KN + + G K G ++ A LF ++ RD+ SWN MI+G
Sbjct: 51 KSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISG 110
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL-ALLDQGRQTYALVIKHGFDS 325
G E + +F M R ++P + F L ASL + G Q + I G
Sbjct: 111 LVSCGFHEYGIRVFFDMQRWEIRPTEFTFSIL----ASLVTCVRHGEQIHGNAICSGVSR 166
Query: 326 -DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+L V N+++ MY + G + F D+VSWN +I + + A F M
Sbjct: 167 YNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLM 226
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
+ ++PD T ++S+C ++ + L + G S +D+ S+ +
Sbjct: 227 REMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIK-MGFLSNSIVLGAGIDMFSKCNR 285
Query: 445 LQRACEIIR 453
L + ++ R
Sbjct: 286 LDDSVKLFR 294
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 191 bits (485), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 224/493 (45%), Gaps = 48/493 (9%)
Query: 7 VSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTK 66
+S K H L+V K + D++ N + ++ G + +AR+VFD+M +
Sbjct: 141 LSACAKSRAKGNGIQIHGLIV--KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALF-----DAMPMKNVVSWNAMVAGCVQNDMLDEAFNY 121
+VV+W SM+ Y F + + LF D N V+ +++ C + + L+
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDA----QRLFKEMPCPNVVSYTVMIDGYVK---V 174
+A + + M+S + C+A +RLF E N+ M YV+
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT 318
Query: 175 KEGGG--------------IARARALFDAMPRRNEV---------------SWTVMINGL 205
+E G I+ A+ RN + SW + N L
Sbjct: 319 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378
Query: 206 VENGL----YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
++ + + A+ +F RM K VV +++ G+ + G+VD AW F+ + ++I SWN
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438
Query: 262 IMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+I+G Q EEA+ +F M + G+ D + +S+ +AC L LD + Y + K
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEK 498
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
+G D+ + LV M+S+CG + F + D+ +W I A A +A
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIEL 558
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
FD MI G++PDG+ F+ L+ C G + + +F M+ +G+ P HY C+VD++
Sbjct: 559 FDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLG 618
Query: 441 RAGQLQRACEIIR 453
RAG L+ A ++I
Sbjct: 619 RAGLLEEAVQLIE 631
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 94/180 (52%), Gaps = 2/180 (1%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
+N +I GYA +G EA+ LF +M+ +G+ PD F +ACA G Q + L++
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K G+ DL V N+LV Y++CG + + F + S+ ++VSW ++I +A+ A
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 380 YFDQMIA-VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F +M+ V P+ +T + ++S C + ++ ++ + + GI + LVD+
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAF-IRNSGIEVNDLMVSALVDM 280
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 27/295 (9%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH 86
V F S+D N I + + A ++FD+M K VVTWNS++ Y +G
Sbjct: 363 VLRNGFESWDNI-CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN-----AMISGFI 141
+ F+ MP KN+VSWN +++G VQ + +EA F +M + + + ++ S
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACG 481
Query: 142 KFGRLCDAQRLF----KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS 197
G L A+ ++ K +V T ++D + + G A ++F+++ R+ +
Sbjct: 482 HLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRC---GDPESAMSIFNSLTNRDVSA 538
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLF---- 249
WT I + G E A ELF M ++ + VA +T G V + +F
Sbjct: 539 WTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSML 598
Query: 250 --QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ D+ + M+ + G EEA+ L M M+P+D+I+ SL AC
Sbjct: 599 KLHGVSPEDV-HYGCMVDLLGRAGLLEEAVQLIEDM---PMEPNDVIWNSLLAAC 649
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/350 (30%), Positives = 186/350 (53%), Gaps = 11/350 (3%)
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP--CPNVVSYTVMIDGYV 172
L A F +P+ ++YN MISG++K G + + L + M YT+ +
Sbjct: 85 LSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKA 144
Query: 173 KVKEGGGIARARALFDAMPRR--------NEVSWTVMINGLVENGLYEEAWELFGRMPQK 224
G + R+L + R ++V T +++ V++G E A +F M +
Sbjct: 145 SNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDE 204
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGR-GEEALNLFSQM 283
NVV T+MI+G+ QG V++A +F + +DI +N M+ G++++G + +++++ M
Sbjct: 205 NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISM 264
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI 343
R G P+ F S+ AC+ L + G+Q +A ++K G + + + ++L+ MY+KCG I
Sbjct: 265 QRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGI 324
Query: 344 VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
D+ F Q + ++ SW ++I + ++ +A F +M + P+ +TFL LS C
Sbjct: 325 NDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSAC 384
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+G +D+ +F M DY + P+ EHYAC+VD+M RAG L +A E R
Sbjct: 385 SHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFAR 434
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 166/378 (43%), Gaps = 58/378 (15%)
Query: 49 RAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ----------------------- 85
+ G ++ ARQVFD++P + +N M++ Y G +
Sbjct: 81 KCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 86 ----------------------HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
H+R + + + +V+ A+V V++ L+ A F
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVL-ITALVDTYVKSGKLESARTVFE 199
Query: 124 AMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
M + N +MISG++ G + DA+ +F ++V Y M++G+ + G R+
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGF--SRSGETAKRS 257
Query: 184 RALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA----STAMITG 235
++ +M R N ++ +I +E ++ ++ + V ++++
Sbjct: 258 VDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDM 317
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ K G +++A +F Q++ +++ SW MI GY +NG EEAL LF++M ++P+ + F
Sbjct: 318 YAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTF 377
Query: 296 VSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQT 353
+ +AC+ L+D+G + + ++ + + +V + + G + + E A
Sbjct: 378 LGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP 437
Query: 354 SQPDIVSWNTIIAAFAQH 371
+PD W ++++ H
Sbjct: 438 ERPDSDIWAALLSSCNLH 455
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 133/279 (47%), Gaps = 28/279 (10%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ + ++G + +AR VF+ M ++VV SM++ Y + GF + + +F+ +K++V +N
Sbjct: 182 VDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYN 241
Query: 104 AMVAGCVQN-DMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCD-------AQRLFKE 155
AMV G ++ + + + + +M A ++ IS F C Q++ +
Sbjct: 242 AMVEGFSRSGETAKRSVDMYISMQR---AGFHPNISTFASVIGACSVLTSHEVGQQVHAQ 298
Query: 156 MPCPNVVSYTVM----IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
+ V ++ M +D Y K GGI AR +FD M +N SWT MI+G +NG
Sbjct: 299 IMKSGVYTHIKMGSSLLDMYAKC---GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNP 355
Query: 212 EEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
EEA ELF RM + N V ++ G VD+ + +F+ ++ RD S + Y
Sbjct: 356 EEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQ-RDY-SMKPKMEHY 413
Query: 268 A----QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
A GR + F +PD I+ +L ++C
Sbjct: 414 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSC 452
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%)
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G++ +A +IK GF DL+++ L+ ++ KCG + + F + +P + ++N +I+ + +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
H L + +M G + DG T +L
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVL 142
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 231/426 (54%), Gaps = 21/426 (4%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NV 99
+ +S+ G++ ++ ++F+K+ K+ V+W +M+++Y F + + F M N+
Sbjct: 244 LTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNL 303
Query: 100 VSWNAMVAGCVQNDMLDE--AFNYFAAMPER--NAASYN-AMISGFIKFGRLCDAQRLFK 154
V+ ++++ C ++ E + + FA E N S + A++ + + G+L D + + +
Sbjct: 304 VTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLR 363
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGL 210
+ N+V++ +I Y G + +A LF M + + + I+ GL
Sbjct: 364 VVSDRNIVAWNSLISLYA---HRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGL 420
Query: 211 YEEAWELFGRMPQKNV---VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
++ G + + +V ++I + K G VD A T+F QI+ R + +WN M+ G+
Sbjct: 421 VPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGF 480
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+QNG EA++LF M + ++ +++ F+++ AC+S+ L++G+ + +I G DL
Sbjct: 481 SQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDL 539
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
+ AL+ MY+KCG + +E F S IVSW+++I A+ H A S F+QM+
Sbjct: 540 FTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVES 599
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G +P+ + F+++LS C +G ++E FNLM +G+ P SEH+AC +D++SR+G L+
Sbjct: 600 GTKPNEVVFMNVLSACGHSGSVEEGKYYFNLM-KSFGVSPNSEHFACFIDLLSRSGDLKE 658
Query: 448 ACEIIR 453
A I+
Sbjct: 659 AYRTIK 664
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 210/427 (49%), Gaps = 23/427 (5%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
+ + + GN++ A +VFD MP +D+V W++++++ +G + +F M V
Sbjct: 143 LCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDA 202
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKE 155
V+ ++V GC + L A + + + + N++++ + K G L ++R+F++
Sbjct: 203 VTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEK 262
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLY 211
+ N VS+T MI Y G +A F M + N V+ +++ GL
Sbjct: 263 IAKKNAVSWTAMISSY---NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319
Query: 212 EEAWELFGRMPQKNV-----VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
E + G ++ + S A++ + + GK+ + T+ + + R+I +WN +I+
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
YA G +AL LF QMV ++PD S +AC + L+ G+Q + VI+ SD
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDV-SD 438
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
V N+L+ MYSK GS+ + F Q +V+WN+++ F+Q+ +A S FD M
Sbjct: 439 EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYH 498
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
+ + +TFL+++ C G +++ + + ++ G+ A L+D+ ++ G L
Sbjct: 499 SYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS-GLKDLFTDTA-LIDMYAKCGDLN 556
Query: 447 RACEIIR 453
A + R
Sbjct: 557 AAETVFR 563
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 198/438 (45%), Gaps = 60/438 (13%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYF--- 122
+D + ++ +Y G P SR +F+A P + + ++ V +LD A + +
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 123 -----------------AAMPERNAASYNAMISGFI--------------------KFGR 145
A R S + G I + G
Sbjct: 92 VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGN 151
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRRNEVSWTVM 201
L DA+++F MP ++V+++ ++ + E G + +A +F M + V+ +
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCL---ENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 202 INGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
+ G E G A + G++ +K + +++T + K G + + +F++I ++
Sbjct: 209 VEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNA 268
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SW MI+ Y + E+AL FS+M+++G++P+ + S+ ++C + L+ +G+ +
Sbjct: 269 VSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGF 328
Query: 318 VIKHGFDSDL-SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
++ D + S++ ALV +Y++CG + D E S +IV+WN++I+ +A + +
Sbjct: 329 AVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQ 388
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR-SEHYA-- 433
A F QM+ ++PD T S +S C AG + +H + I S+ +
Sbjct: 389 ALGLFRQMVTQRIKPDAFTLASSISACENAGLVP-----LGKQIHGHVIRTDVSDEFVQN 443
Query: 434 CLVDVMSRAGQLQRACEI 451
L+D+ S++G + A +
Sbjct: 444 SLIDMYSKSGSVDSASTV 461
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 219 GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
GR+ +++ + T +I + G D + +F+ D + ++I + A++
Sbjct: 28 GRL-RRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAID 86
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACA-SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
L+ ++V Q +F S+ ACA S L G + + +IK G D D + +L+ MY
Sbjct: 87 LYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+ G++ D+E F D+V+W+T++++ ++ KA F M+ GV PD +T +
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 398 SLLSVCCRAG 407
S++ C G
Sbjct: 207 SVVEGCAELG 216
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 115/244 (47%), Gaps = 13/244 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + N I +S++G++ +A VF+++ + VVTWNSML + +G + +LFD M
Sbjct: 438 DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY 497
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEA---FNYFAAMPERNAASYNAMISGFIKFGRLCD 148
N V++ A++ C L++ + ++ + A+I + K G L
Sbjct: 498 HSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLFTDTALIDMYAKCGDLNA 557
Query: 149 AQRLFKEMPCPNVVSYTVMIDGY-VKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
A+ +F+ M ++VS++ MI+ Y + + G I+ + ++ + NEV + +++
Sbjct: 558 AETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGH 617
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGF----CKQGKVDEAWTLFQQIR-CRDIASWNI 262
+G EE F M V ++ F + G + EA+ +++ D + W
Sbjct: 618 SGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGS 677
Query: 263 MITG 266
++ G
Sbjct: 678 LVNG 681
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/439 (27%), Positives = 214/439 (48%), Gaps = 25/439 (5%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V N I +SR G + +R+VF+ M +++ +WNS+L++Y G+ + L D M
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 96 M----KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMIS---------GFIK 142
+ ++V+WN++++G + +A M + IS G +K
Sbjct: 183 ICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLK 242
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMI 202
G+ L ++ +V T +ID Y+K G + AR +FD M +N V+W ++
Sbjct: 243 LGKAIHGYILRNQL-WYDVYVETTLIDMYIKT---GYLPYARMVFDMMDAKNIVAWNSLV 298
Query: 203 NGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
+GL L ++A L RM ++ + + ++ +G+ GK ++A + +++ + +A
Sbjct: 299 SGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVA 358
Query: 259 ----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
SW + +G ++NG AL +F +M G+ P+ +L L+LL G++
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ ++ D V ALV MY K G + + F + SWN ++ +A
Sbjct: 419 HGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRG 478
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
+ + F M+ G+ PD ITF S+LSVC +G + E F+LM YGI P EH +C
Sbjct: 479 EEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSC 538
Query: 435 LVDVMSRAGQLQRACEIIR 453
+VD++ R+G L A + I+
Sbjct: 539 MVDLLGRSGYLDEAWDFIQ 557
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 174/390 (44%), Gaps = 59/390 (15%)
Query: 10 ALKPTPSS-------TARHTHFLLVFAKHFSS------YDVYRANLNIAAFSRAGNITAA 56
LKP+ SS A H L A H YDVY I + + G + A
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 57 RQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQN 112
R VFD M K++V WNS+++ ++ + + AL M + + ++WN++ +G
Sbjct: 280 RMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL 339
Query: 113 DMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMI 168
++A + M E+ N S+ A+ SG K G +A ++F +M
Sbjct: 340 GKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQ----------- 388
Query: 169 DGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV- 227
+EG G P +S + I G + L E+ G +KN++
Sbjct: 389 ------EEGVG-----------PNAATMSTLLKILGCLS--LLHSGKEVHGFCLRKNLIC 429
Query: 228 ---ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+TA++ + K G + A +F I+ + +ASWN M+ GYA GRGEE + FS M+
Sbjct: 430 DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVML 489
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALV-IKHGFDSDLSVNNALVTMYSKCGSI 343
GM+PD + F S+ + C + L+ +G + + L+ ++G + + +V + + G +
Sbjct: 490 EAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYL 549
Query: 344 VDSELAFGQTS--QPDIVSWNTIIAAFAQH 371
D F QT +PD W +++ H
Sbjct: 550 -DEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 148/345 (42%), Gaps = 79/345 (22%)
Query: 183 ARALFDAMPRRNEVSWT--VMINGLVENGLYEEAWELFGRMP------------------ 222
A LFD MP+R++++W VM+N + +G +E+A ELF M
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVN--LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVC 99
Query: 223 ---------------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
+ NV ++I + + GK++ + +F ++ R+++SWN
Sbjct: 100 SNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWN 159
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL-------------- 307
+++ Y + G ++A+ L +M G++PD + + SL + AS L
Sbjct: 160 SILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA 219
Query: 308 ---------------------LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
L G+ + ++++ D+ V L+ MY K G + +
Sbjct: 220 GLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYA 279
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
+ F +IV+WN++++ + L A + +M G++PD IT+ SL S
Sbjct: 280 RMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL 339
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
GK ++++++ M + G+ P + + S+ G + A ++
Sbjct: 340 GKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKV 383
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/443 (29%), Positives = 204/443 (46%), Gaps = 64/443 (14%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
+D N++L Y + G + +R +FD M ++V+SWN M++G +N +++A F M
Sbjct: 150 RDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWM 209
Query: 126 PERNAASYNAMISGFI---------KFGR----LCDAQRLFKEMPCPNVVSYTVMIDGYV 172
+ +A I + + GR L + +RL ++ N +++ Y+
Sbjct: 210 VNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA-----LVNMYL 264
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------GRMPQKNV 226
K G + AR +FD M RR+ ++WT MING E+G E A EL G P
Sbjct: 265 KC---GRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVT 321
Query: 227 VASTAMITG---FCKQGKVDEAWTLFQQI---------------RCRDI----------- 257
+AS + G GK W + QQ+ +C+ +
Sbjct: 322 IASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGAS 381
Query: 258 ----ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
W+ +I G QN +AL LF +M R ++P+ SL A A+LA L Q
Sbjct: 382 KYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMN 441
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG----QTSQPDIVSWNTIIAAFA 369
+ + K GF S L LV +YSKCG++ + F + D+V W +I+ +
Sbjct: 442 IHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYG 501
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRS 429
H + A F +M+ GV P+ ITF S L+ C +G ++E + LF M+ Y RS
Sbjct: 502 MHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARS 561
Query: 430 EHYACLVDVMSRAGQLQRACEII 452
HY C+VD++ RAG+L A +I
Sbjct: 562 NHYTCIVDLLGRAGRLDEAYNLI 584
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 137/294 (46%), Gaps = 24/294 (8%)
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
A F MP+ + SYN +I +++ G DA +F M V + DGY
Sbjct: 68 ARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGV---KCVPDGYTY---- 120
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
+A+A +M GLV +G +W FGR + A++ +
Sbjct: 121 PFVAKAAGELKSMKL-----------GLVVHGRILRSW--FGR----DKYVQNALLAMYM 163
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
GKV+ A +F ++ RD+ SWN MI+GY +NG +AL +F MV + D VS
Sbjct: 164 NFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVS 223
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
+ C L L+ GR + LV + + V NALV MY KCG + ++ F + + D
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+++W +I + + A M GVRP+ +T SL+SVC A K+++
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVND 337
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/444 (23%), Positives = 184/444 (41%), Gaps = 64/444 (14%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
++ G+IT AR++F++MP ++++N ++ Y G + ++F M + V
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGV------- 111
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
CV + Y + A +M G + GR+ + ++ N +
Sbjct: 112 -KCVPD-------GYTYPFVAKAAGELKSMKLGLVVHGRILRSW-FGRDKYVQNALLAMY 162
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF-------- 218
M G V++ AR +FD M R+ +SW MI+G NG +A +F
Sbjct: 163 MNFGKVEM--------ARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESV 214
Query: 219 ----------------------GRMPQK---------NVVASTAMITGFCKQGKVDEAWT 247
GR K + A++ + K G++DEA
Sbjct: 215 DLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARF 274
Query: 248 LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+F ++ RD+ +W MI GY ++G E AL L M G++P+ + SL + C
Sbjct: 275 VFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALK 334
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
++ G+ + ++ SD+ + +L++MY+KC + F S+ W+ IIA
Sbjct: 335 VNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAG 394
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
Q+ L A F +M V P+ T SLL + ++MN+ + G
Sbjct: 395 CVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT-GFMS 453
Query: 428 RSEHYACLVDVMSRAGQLQRACEI 451
+ LV V S+ G L+ A +I
Sbjct: 454 SLDAATGLVHVYSKCGTLESAHKI 477
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/460 (28%), Positives = 221/460 (48%), Gaps = 70/460 (15%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAF----SRAGNITAAR 57
L+ + S+ + T + +H ++ + R NLN+A F S AG++ A
Sbjct: 14 LNWFVTSLKIHGNNLKTLKQSHCYMIIT------GLNRDNLNVAKFIEACSNAGHLRYAY 67
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQ-HSRALFDAMPMKNVVSWNAMVAGCVQNDMLD 116
VF P + N+M+ A P HS A + + + A C + D
Sbjct: 68 SVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIA---------ITVYRKLWALCAKPDTF- 117
Query: 117 EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL-FKEMPCPNVVSYTVMIDGYVKVK 175
F + + R + + FGR Q + F +VV T +I Y
Sbjct: 118 -TFPFVLKIAVRVSDVW---------FGRQIHGQVVVFGFDSSVHVV--TGLIQMYFSC- 164
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITG 235
GG+ AR +FD M ++ W A++ G
Sbjct: 165 --GGLGDARKMFDEMLVKDVNVWN-------------------------------ALLAG 191
Query: 236 FCKQGKVDEAWTLFQQIRC--RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ K G++DEA +L + + C R+ SW +I+GYA++GR EA+ +F +M+ ++PD++
Sbjct: 192 YGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEV 251
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+++ +ACA L L+ G + + V G + +S+NNA++ MY+K G+I + F
Sbjct: 252 TLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECV 311
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
++ ++V+W TIIA A H +A + F++M+ GVRP+ +TF+++LS C G +D
Sbjct: 312 NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGK 371
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
LFN M YGI P EHY C++D++ RAG+L+ A E+I+
Sbjct: 372 RLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 165/372 (44%), Gaps = 48/372 (12%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT 65
++ IA++ + R H +V SS V + + + G + AR++FD+M
Sbjct: 122 VLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQM--YFSCGGLGDARKMFDEMLV 179
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMP--MKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
KDV WN++L Y G +R+L + MP ++N VSW +++G ++ EA F
Sbjct: 180 KDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQ 239
Query: 124 AM----PERNAASYNAMIS-----GFIKFG-RLC---DAQRLFKEMPCPNVVSYTVMIDG 170
M E + + A++S G ++ G R+C D + + + + N V ID
Sbjct: 240 RMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAV-----IDM 294
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV---- 226
Y K G I +A +F+ + RN V+WT +I GL +G EA +F RM + V
Sbjct: 295 YAK---SGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPND 351
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFS 281
V A+++ G VD LF +R + +I + MI + G+ EA +
Sbjct: 352 VTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIK 411
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA-----LVTM 336
M + + I+ SL A L+ G + + +IK L NN+ L +
Sbjct: 412 SM---PFKANAAIWGSLLAASNVHHDLELGERALSELIK------LEPNNSGNYMLLANL 462
Query: 337 YSKCGSIVDSEL 348
YS G +S +
Sbjct: 463 YSNLGRWDESRM 474
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 121/434 (27%), Positives = 213/434 (49%), Gaps = 46/434 (10%)
Query: 65 TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAA 124
+ +VV S+L Y G + +R +FD + ++ V+WN M+ G ++ND +++ +F
Sbjct: 231 SDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRN 290
Query: 125 M------PER-----------NAASY----------------------NAMISGFIKFGR 145
M P + SY NA++ + G
Sbjct: 291 MLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD 350
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVK--VKEGGGIARARALFDAMPRRNEVSWTVMIN 203
+ +A +F + PN+VS+ +I G + E + R L + PR +E +++ I+
Sbjct: 351 MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Query: 204 GLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
E + L G++ +++V T +++ + K + + A +F ++ RD+
Sbjct: 411 ATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVL 470
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
W MI G+++ G E A+ F +M R + D S+ AC+ +A+L QG + L I
Sbjct: 471 WTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAI 530
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+ GFD +SV ALV MY K G +E F S PD+ WN+++ A++QH + KA S
Sbjct: 531 RTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALS 590
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
+F+Q++ G PD +T+LSLL+ C G + L+N M + GI +HY+C+V+++
Sbjct: 591 FFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLV 649
Query: 440 SRAGQLQRACEIIR 453
S+AG + A E+I
Sbjct: 650 SKAGLVDEALELIE 663
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 181/388 (46%), Gaps = 24/388 (6%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWN--SMLTAYWHSGFPQHSR------- 88
Y N I+ + R ++ AR+VFDKMP +++VT S + Y G HS+
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 89 ALFDAMPMKNVVSWNA-MVAGCVQNDMLDEAFNYFAAMPERNAASY-------NAMISGF 140
+ MP+ + S + CV +L A A + A + N +IS +
Sbjct: 83 QMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMY 142
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA----RARALFDAMPRRNEV 196
++ G L A+++F +MP NVVSY + Y + + A A P +
Sbjct: 143 VRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTF 202
Query: 197 SWTVMINGLVENGLYEEAW--ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
+ V + ++E+ L + ++ NVV T+++ + G ++ A +F +
Sbjct: 203 TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNN 262
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
RD +WN MI G +N + E+ L F M+ +G+ P + + C+ L G+
Sbjct: 263 RDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLI 322
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+A +I +DL ++NAL+ MY CG + ++ FG+ P++VSWN+II+ +++
Sbjct: 323 HARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFG 382
Query: 375 YKARSYFDQMIAVGV-RPDGITFLSLLS 401
+A + +++ + RPD TF + +S
Sbjct: 383 EQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 133/290 (45%), Gaps = 17/290 (5%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDA---- 189
N +IS +++ L A+++F +MP N+V+ + + V G + +
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 190 --MPRRNEVSWTV--MINGLVENGLYEEAWELFGRMPQKNVVASTA-------MITGFCK 238
MP NE++ +V + V + + A ++ + A+T +I+ + +
Sbjct: 86 FFMPL-NEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVR 144
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGR-GEEALNLFSQMVRTGMQPDDLIFVS 297
G +++A +F ++ R++ S+N + + Y++N A L + M ++P+ F S
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
L CA L + G + +IK G+ ++ V +++ MYS CG + + F + D
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
V+WNT+I ++ +F M+ GV P T+ +L+ C + G
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 188/367 (51%), Gaps = 55/367 (14%)
Query: 133 YNAMISGFIKF-----GRLCDA---QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
YN ++ F GR+ A Q +F+ ++V +++ Y K G + AR
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRH----DIVMGNTLLNMYAKC---GSLEEAR 115
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------PQK-------------- 224
+F+ MP+R+ V+WT +I+G ++ +A F +M P +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 225 -------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
NV +A++ + + G +D+A +F + R+ SWN +I
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
G+A+ E+AL LF M+R G +P + SLF AC+S L+QG+ +A +IK G
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI 385
N L+ MY+K GSI D+ F + ++ D+VSWN+++ A+AQH +A +F++M
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 386 AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
VG+RP+ I+FLS+L+ C +G +DE + + LM D GI P + HY +VD++ RAG L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDL 414
Query: 446 QRACEII 452
RA I
Sbjct: 415 NRALRFI 421
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 173/380 (45%), Gaps = 48/380 (12%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H L +H D+ N + +++ G++ AR+VF+KMP +D VTW +++
Sbjct: 83 HAHILQSIFRH----DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLI----- 133
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVA-GCVQNDMLDEAFNYFAAMPERNAASY------ 133
SG+ QH R P ++ +N M+ G N+ + AA R +
Sbjct: 134 SGYSQHDR------PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFC 187
Query: 134 ------------NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
+A++ + ++G + DAQ +F + N VS+ +I G+ + G
Sbjct: 188 VKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR---RSGTE 244
Query: 182 RARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKN----VVASTAMI 233
+A LF M R + S+ + G E+ + M + A ++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ K G + +A +F ++ RD+ SWN ++T YAQ+G G+EA+ F +M R G++P+++
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
F+S+ TAC+ LLD+G Y L+ K G + +V + + G + + L F +
Sbjct: 365 SFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDL-NRALRFIEE 423
Query: 354 S--QPDIVSWNTIIAAFAQH 371
+P W ++ A H
Sbjct: 424 MPIEPTAAIWKALLNACRMH 443
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
D + +L C LL QGR +A +++ F D+ + N L+ MY+KCGS+ ++ F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV-------C 403
+ Q D V+W T+I+ ++QH A +F+QM+ G P+ T S++ C
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 404 C 404
C
Sbjct: 179 C 179
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 193/371 (52%), Gaps = 10/371 (2%)
Query: 88 RALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC 147
R FD+ +V N M+ + D ++ A F M ER+ S+N+MISG+ + G
Sbjct: 160 RGGFDS----DVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFE 215
Query: 148 DAQRLFKEM-PC----PNVVSYTVMIDGYVKVKEG-GGIARARALFDAMPRRNEVSWTVM 201
D ++++K M C PN V+ + + + G+ + + + + + +
Sbjct: 216 DCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAV 275
Query: 202 INGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
I + G + A LF M +K+ V A+I+G+ G V EA LF ++ +++WN
Sbjct: 276 IGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWN 335
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
MI+G QN EE +N F +M+R G +P+ + SL + + L G++ +A I++
Sbjct: 336 AMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRN 395
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
G D+++ V +++ Y+K G ++ ++ F +++W II A+A H A S F
Sbjct: 396 GADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLF 455
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
DQM +G +PD +T ++LS +G D + ++F+ M+ Y I P EHYAC+V V+SR
Sbjct: 456 DQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSR 515
Query: 442 AGQLQRACEII 452
AG+L A E I
Sbjct: 516 AGKLSDAMEFI 526
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 175/399 (43%), Gaps = 61/399 (15%)
Query: 4 SIIVSIALKPTPS-------STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAA 56
SI +S LK S AR H ++ F S DV+ N I +++ NI +A
Sbjct: 129 SISISCVLKALSGCDDFWLGSLARQVHGFVIRGG-FDS-DVFVGNGMITYYTKCDNIESA 186
Query: 57 RQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP-----MKNVVSWNAMVAGCVQ 111
R+VFD+M +DVV+WNSM++ Y SG + + ++ AM N V+ ++ C Q
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 112 NDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVM 167
+ L M E + + NA+I + K G L A+ LF EM + V+Y +
Sbjct: 247 SSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAI 306
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------ 221
I GY+ G + A ALF M +W MI+GL++N +EE F M
Sbjct: 307 ISGYMA---HGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSR 363
Query: 222 ---------------------------------PQKNVVASTAMITGFCKQGKVDEAWTL 248
N+ +T++I + K G + A +
Sbjct: 364 PNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRV 423
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F + R + +W +IT YA +G + A +LF QM G +PDD+ ++ +A A
Sbjct: 424 FDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDS 483
Query: 309 DQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
D + + +++ K+ + + +V++ S+ G + D+
Sbjct: 484 DMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDA 522
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 105/207 (50%), Gaps = 16/207 (7%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
N +AS +I+ + +Q + +A +F +I R+ S+N ++ Y +A +LF +
Sbjct: 57 NFLASK-LISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREMYFDAFSLFLSWI 115
Query: 285 RT------GMQPDDLIFVSLFTA---CASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
+ +PD + + A C L RQ + VI+ GFDSD+ V N ++T
Sbjct: 116 GSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMIT 175
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGI 394
Y+KC +I + F + S+ D+VSWN++I+ ++Q + + + M+A +P+G+
Sbjct: 176 YYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGV 235
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVH 421
T +S+ C ++ + +F L VH
Sbjct: 236 TVISVFQACGQSSDL-----IFGLEVH 257
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 125/265 (47%), Gaps = 20/265 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+ N I +++ G++ AR +FD+M KD VT+ ++++ Y G + + ALF M
Sbjct: 268 DLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEME 327
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDAQR 151
+ +WNAM++G +QN+ +E N F M N + ++++ L +
Sbjct: 328 SIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKE 387
Query: 152 L----FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
+ + N+ T +ID Y K+ G + A+ +FD R+ ++WT +I
Sbjct: 388 IHAFAIRNGADNNIYVTTSIIDNYAKL---GFLLGAQRVFDNCKDRSLIAWTAIITAYAV 444
Query: 208 NGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIA 258
+G + A LF +M + + V TA+++ F G D A +F + + +
Sbjct: 445 HGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVE 504
Query: 259 SWNIMITGYAQNGRGEEALNLFSQM 283
+ M++ ++ G+ +A+ S+M
Sbjct: 505 HYACMVSVLSRAGKLSDAMEFISKM 529
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 19/235 (8%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFA-KHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
LSS++ S+ T SS + + FA ++ + ++Y I +++ G + A++VF
Sbjct: 369 LSSLLPSL----TYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVF 424
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNVVSWNAMVAGCVQNDMLD 116
D + ++ W +++TAY G + +LFD M + V+ A+++ + D
Sbjct: 425 DNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSD 484
Query: 117 EAFNYFAAM-----PERNAASYNAMISGFIKFGRLCDAQRLFKEMPC-PNVVSYTVMIDG 170
A + F +M E Y M+S + G+L DA +MP P + +++G
Sbjct: 485 MAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNG 544
Query: 171 YVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ 223
V IAR LF+ P N ++T+M N + G +EEA + +M +
Sbjct: 545 -ASVLGDLEIARFACDRLFEMEPE-NTGNYTIMANLYTQAGRWEEAEMVRNKMKR 597
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/430 (26%), Positives = 216/430 (50%), Gaps = 30/430 (6%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
IA+ R G I+ AR+VFD++P + V +NSM+ Y P L+D M + +
Sbjct: 57 IASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDS 116
Query: 100 VSWNAMVAGCVQNDMLDEA---------FNYFAAMPERNAASYNAMISGFIKFGRLCDAQ 150
++ + C+ +L++ F Y + + +++++ ++K G++ +A+
Sbjct: 117 STFTMTIKACLSGLVLEKGEAVWCKAVDFGY-----KNDVFVCSSVLNLYMKCGKMDEAE 171
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN-- 208
LF +M +V+ +T M+ G+ + G +A + M V++ GL++
Sbjct: 172 VLFGKMAKRDVICWTTMVTGFA---QAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASG 228
Query: 209 --GLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
G + + G + + NVV T+++ + K G ++ A +F ++ + SW
Sbjct: 229 DLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGS 288
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I+G+AQNG +A +M G QPD + V + AC+ + L GR + ++K
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
D AL+ MYSKCG++ S F + D+V WNT+I+ + H + S F
Sbjct: 349 V-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFL 407
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M + PD TF SLLS +G +++ + F++M++ Y I P +HY CL+D+++RA
Sbjct: 408 KMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARA 467
Query: 443 GQLQRACEII 452
G+++ A ++I
Sbjct: 468 GRVEEALDMI 477
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 158/326 (48%), Gaps = 17/326 (5%)
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----- 190
+I+ + G + A+++F E+P V Y MI Y + K + R L+D M
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEVLR---LYDQMIAEKI 112
Query: 191 -PRRNEVSWTVM--INGLV-ENGLYEEAWELFGRMPQKN-VVASTAMITGFCKQGKVDEA 245
P + + T+ ++GLV E G E W KN V ++++ + K GK+DEA
Sbjct: 113 QPDSSTFTMTIKACLSGLVLEKG--EAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEA 170
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
LF ++ RD+ W M+TG+AQ G+ +A+ + +M G D ++ + L A L
Sbjct: 171 EVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDL 230
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
GR + + + G ++ V +LV MY+K G I + F + VSW ++I
Sbjct: 231 GDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLI 290
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+ FAQ+ L KA +M ++G +PD +T + +L C + G + ++ L + + +
Sbjct: 291 SGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL-KTGRLVHCYILKRHV 349
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEI 451
R A L+D+ S+ G L + EI
Sbjct: 350 LDRVTATA-LMDMYSKCGALSSSREI 374
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 117/239 (48%), Gaps = 15/239 (6%)
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
L G ++++AS I G++ A +F ++ R ++ +N MI Y++ +E
Sbjct: 47 LNGSSISRDLIASCGRI------GEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDEV 100
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
L L+ QM+ +QPD F AC S +L++G + + G+ +D+ V ++++ +
Sbjct: 101 LRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNL 160
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y KCG + ++E+ FG+ ++ D++ W T++ FAQ KA ++ +M G D +
Sbjct: 161 YMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVM 220
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDY----GIPPRSEHYACLVDVMSRAGQLQRACEI 451
L LL G D M VH Y G+P LVD+ ++ G ++ A +
Sbjct: 221 LGLLQASGDLG--DTKM---GRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRV 274
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 124/450 (27%), Positives = 213/450 (47%), Gaps = 54/450 (12%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS--GFP--------QHSRALFDAMPM 96
+++ N+ A+ +FD + ++N+M+T Y GF S FD + +
Sbjct: 326 YAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISL 385
Query: 97 KNVVSWNAMVAG--------------------CVQNDMLD---------EAFNYFAAMPE 127
V A+V G CV N +D EAF F M
Sbjct: 386 SGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR 445
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
R+A S+NA+I+ + G+ + LF M + +K GG + +
Sbjct: 446 RDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIH 505
Query: 188 DAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVD 243
++ + N +I+ + G+ EEA ++ R Q+ V+ G ++
Sbjct: 506 SSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVS-----------GTME 554
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
E + + SWN +I+GY + E+A LF++M+ G+ PD + ++ CA
Sbjct: 555 ELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCA 614
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNT 363
+LA G+Q +A VIK SD+ + + LV MYSKCG + DS L F ++ + D V+WN
Sbjct: 615 NLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNA 674
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY 423
+I +A H +A F++MI ++P+ +TF+S+L C G ID+ + F +M DY
Sbjct: 675 MICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDY 734
Query: 424 GIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G+ P+ HY+ +VD++ ++G+++RA E+IR
Sbjct: 735 GLDPQLPHYSNMVDILGKSGKVKRALELIR 764
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 209/458 (45%), Gaps = 52/458 (11%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N + ++ + + +A VFDKMP +DVV+WN M+ Y S + + F+ MP+++VV
Sbjct: 87 NCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVV 146
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP--- 157
SWN+M++G +QN ++ F M + +K + L ++
Sbjct: 147 SWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV 206
Query: 158 ----C-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
C +VV+ + ++D Y K G + +F +P +N VSW+ +I G V+N L
Sbjct: 207 VRVGCDTDVVAASALLDMYAK---GKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 263
Query: 213 EAWELFGRMPQKNV---------------------------------------VASTAMI 233
A + F M + N + TA +
Sbjct: 264 LALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATL 323
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ K + +A LF + S+N MITGY+Q G +AL LF +++ +G+ D++
Sbjct: 324 DMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEI 383
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+F ACA + L +G Q Y L IK D+ V NA + MY KC ++ ++ F +
Sbjct: 384 SLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEM 443
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
+ D VSWN IIAA Q+ Y+ F M+ + PD TF S+L C G + M
Sbjct: 444 RRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGM 502
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ + +V G+ S L+D+ S+ G ++ A +I
Sbjct: 503 EIHSSIVKS-GMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 118/481 (24%), Positives = 197/481 (40%), Gaps = 109/481 (22%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV A+ + +++ + +VF +P K+
Sbjct: 214 DVVAASALLDMYAKGKRFVESLRVFQGIPEKNS--------------------------- 246
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF---------IKFGRL 146
VSW+A++AGCVQN++L A +F M + NA ++ + ++ G
Sbjct: 247 ----VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQ 302
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMING-- 204
A L + +V T +D Y K + A+ LFD N S+ MI G
Sbjct: 303 LHAHALKSDFAADGIVR-TATLDMYAKCD---NMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 205 --------------LVENGL-------------------YEEAWELFGRMPQK----NVV 227
L+ +GL E +++G + +V
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVC 418
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
+ A I + K + EA+ +F ++R RD SWN +I + QNG+G E L LF M+R+
Sbjct: 419 VANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSR 478
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
++PD+ F S+ AC L G + ++ ++K G S+ SV +L+ MYSKCG I ++E
Sbjct: 479 IEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAE 537
Query: 348 LA---FGQTS-----------------QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
F Q + Q VSWN+II+ + A+ F +M+ +
Sbjct: 538 KIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEM 597
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC--LVDVMSRAGQL 445
G+ PD T+ ++L C + ++ +S+ Y C LVD+ S+ G L
Sbjct: 598 GITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK---ELQSDVYICSTLVDMYSKCGDL 654
Query: 446 Q 446
Sbjct: 655 H 655
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 97/202 (48%), Gaps = 12/202 (5%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQH 86
V K S DVY + + +S+ G++ +R +F+K +D VTWN+M+ Y H G +
Sbjct: 629 VIKKELQS-DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEE 687
Query: 87 SRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMI 137
+ LF+ M ++N+ V++ +++ C ++D+ YF M + Y+ M+
Sbjct: 688 AIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMV 747
Query: 138 SGFIKFGRLCDAQRLFKEMP--CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
K G++ A L +EMP +V+ T++ + A A + ++
Sbjct: 748 DILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDS 807
Query: 196 VSWTVMINGLVENGLYEEAWEL 217
++T++ N + G++E+ +L
Sbjct: 808 SAYTLLSNVYADAGMWEKVSDL 829
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
F +F CA L+ G+Q +A +I GF V N L+ +Y+ V + + F +
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
D+VSWN +I +++ +KA S+F+ M VR D +++ S+LS + G+ +S+
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMM---PVR-DVVSWNSMLSGYLQNGESLKSIE 166
Query: 415 LFNLMVHDYGIPPRSEHYACLVDVMS 440
+F M + GI +A ++ V S
Sbjct: 167 VFVDMGRE-GIEFDGRTFAIILKVCS 191
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/405 (28%), Positives = 208/405 (51%), Gaps = 22/405 (5%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D + S+L Y G +++ +FD M K+VV+WN +++G VQ ++++A Y +
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAI-YMCQLM 366
Query: 127 ERNAASYNAM-ISGFIKFGRLCDAQRLFKEMPC--------PNVVSYTVMIDGYVKVKEG 177
Y+ + ++ + + +L KE+ C ++V + ++D Y K
Sbjct: 367 RLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC--- 423
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMI 233
G I A+ +FD+ ++ + W ++ E+GL EA LF M + NV+ +I
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII 483
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
+ G+VDEA +F Q++ I SW M+ G QNG EEA+ +M +G++
Sbjct: 484 LSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLR 543
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL-SVNNALVTMYSKCGSIVDSEL 348
P+ +ACA LA L GR + +I++ S L S+ +LV MY+KCG I +E
Sbjct: 544 PNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEK 603
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
FG ++ N +I+A+A + +A + + + VG++PD IT ++LS C AG
Sbjct: 604 VFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGD 663
Query: 409 IDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
I++++ +F +V + P EHY +VD+++ AG+ ++A +I
Sbjct: 664 INQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIE 708
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 217/454 (47%), Gaps = 22/454 (4%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLT 76
ST + H ++ F + + Y + +++ + A +F K+ ++V +W +++
Sbjct: 87 STGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 77 AYWHSGFPQHSRALFDAMPMKNVVSWNAMV------AGCVQNDMLDEAFNYFAAMPERNA 130
G + + F M + N +V G ++ + +
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLED 206
Query: 131 ASY--NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFD 188
+ +++ + K G L DA ++F E+P N V++ ++ GYV + G A LF
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV---QNGKNEEAIRLFS 263
Query: 189 AM------PRRNEVSWTVMIN---GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQ 239
M P R VS + + G VE G A + M N++ T+++ +CK
Sbjct: 264 DMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKV 322
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
G ++ A +F ++ +D+ +WN++I+GY Q G E+A+ + M ++ D + +L
Sbjct: 323 GLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLM 382
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
+A A L G++ I+H F+SD+ + + ++ MY+KCGSIVD++ F T + D++
Sbjct: 383 SAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI 442
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
WNT++AA+A+ L +A F M GV P+ IT+ ++ R G++DE+ ++F L
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF-LQ 501
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ GI P + +++ M + G + A +R
Sbjct: 502 MQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLR 535
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 174/429 (40%), Gaps = 83/429 (19%)
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE 127
V +S+ Y G + +FD +P +N V+WNA++ G VQN +EA F+ M +
Sbjct: 208 VFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRK 267
Query: 128 RNAASYNAMIS---------GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG 178
+ +S G ++ G+ A + M N++ T +++ Y KV G
Sbjct: 268 QGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG-TSLLNFYCKV---G 323
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL--------------------- 217
I A +FD M ++ V+W ++I+G V+ GL E+A +
Sbjct: 324 LIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMS 383
Query: 218 ---------FGRMPQ---------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
G+ Q ++V ++ ++ + K G + +A +F +D+
Sbjct: 384 AAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLIL 443
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN ++ YA++G EAL LF M G+ P+ + + + L+LL G+ +
Sbjct: 444 WNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII-----LSLLRNGQ------V 492
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
D L + ++ + P+++SW T++ Q+ +A
Sbjct: 493 DEAKDMFLQMQSSGII--------------------PNLISWTTMMNGMVQNGCSEEAIL 532
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
+ +M G+RP+ + LS C + + ++ + LVD+
Sbjct: 533 FLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMY 592
Query: 440 SRAGQLQRA 448
++ G + +A
Sbjct: 593 AKCGDINKA 601
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 45/304 (14%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
+H D+ A+ + +++ G+I A++VFD KD++ WN++L AY SG +
Sbjct: 403 RHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALR 462
Query: 90 LFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGR 145
LF M ++ NV++WN ++ ++N +DEA + F M SG I
Sbjct: 463 LFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS----------SGII---- 508
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF-----DAMPRRNEVSWTV 200
PN++S+T M++G V+ G + LF ++ R N S TV
Sbjct: 509 -------------PNLISWTTMMNGMVQ----NGCSEEAILFLRKMQESGLRPNAFSITV 551
Query: 201 MINGLVENGLYEEAWELFG---RMPQKNVVAS--TAMITGFCKQGKVDEAWTLFQQIRCR 255
++ + G R Q + + S T+++ + K G +++A +F
Sbjct: 552 ALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYS 611
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
++ N MI+ YA G +EA+ L+ + G++PD++ ++ +AC ++Q + +
Sbjct: 612 ELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIF 671
Query: 316 ALVI 319
++
Sbjct: 672 TDIV 675
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG- 322
++ +NG +EAL+L ++M ++ I+ + C L G+Q +A ++K+G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 323 -FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
+ + + LV Y+KC ++ +E+ F + ++ SW II + L A F
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH----YACLVD 437
+M+ + PD + +VC G + S F VH Y + E + L D
Sbjct: 162 VEMLENEIFPDNFV---VPNVCKACGALKWSR--FGRGVHGYVVKSGLEDCVFVASSLAD 216
Query: 438 VMSRAGQLQRACEI 451
+ + G L A ++
Sbjct: 217 MYGKCGVLDDASKV 230
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 211/429 (49%), Gaps = 52/429 (12%)
Query: 74 MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----N 129
++ Y G +H+R LFD + ++VVSW AM++ + +A F M N
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMP---CP-NVVSYTVMIDGYVKVKEGGGIARARA 185
+Y +++ G L + ++ + C N++ + ++ Y + G + AR
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARC---GKMEEARL 169
Query: 186 LFDAMPRRNEVSWTVMINGLVENGLYEEAWELF---------------GRMPQKNVVAST 230
FD+M R+ VSW MI+G N + ++ LF G + + ++V
Sbjct: 170 QFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKC 229
Query: 231 ------------------------AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
+++ + K G + AW L + + RD+ S +ITG
Sbjct: 230 LEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITG 289
Query: 267 YAQ-NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG-FD 324
++Q N +A ++F M+R + D+++ S+ C ++A + GRQ + +K
Sbjct: 290 FSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIR 349
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
D+++ N+L+ MY+K G I D+ LAF + + D+ SW ++IA + +H + KA +++M
Sbjct: 350 FDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM 409
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
++P+ +TFLSLLS C G+ + +++ M++ +GI R EH +C++D+++R+G
Sbjct: 410 EHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGY 469
Query: 445 LQRACEIIR 453
L+ A +IR
Sbjct: 470 LEEAYALIR 478
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
N+ +I + KQG V A LF +I RD+ SW MI+ +++ G +AL LF +M
Sbjct: 46 NLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMH 105
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
R ++ + + S+ +C L L +G Q + V K +L V +AL+++Y++CG +
Sbjct: 106 REDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKME 165
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
++ L F + D+VSWN +I + + + S F M+ G +PD TF SLL
Sbjct: 166 EARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLL 221
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/512 (21%), Positives = 217/512 (42%), Gaps = 106/512 (20%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD 61
L +++ + LK AR +F + S DV I+ FSR G A +F
Sbjct: 49 LKDMLIDLYLKQGDVKHARK-----LFDR-ISKRDVVSWTAMISRFSRCGYHPDALLLFK 102
Query: 62 KMPTKDV---------------------------------------VTWNSMLTAYWHSG 82
+M +DV + +++L+ Y G
Sbjct: 103 EMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCG 162
Query: 83 FPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM------PE--------- 127
+ +R FD+M +++VSWNAM+ G N D +F+ F M P+
Sbjct: 163 KMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLR 222
Query: 128 ------------------------RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS 163
R++A ++++ ++K G L +A +L + +++S
Sbjct: 223 ASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLS 282
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL---------VENGLYEEA 214
T +I G+ ++ + A +F M R V+++ + V G
Sbjct: 283 CTALITGF--SQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHG 340
Query: 215 WELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
+ L + +V ++I + K G++++A F++++ +D+ SW +I GY ++G E
Sbjct: 341 FALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFE 400
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVNNAL 333
+A++L+++M ++P+D+ F+SL +AC+ + G + Y +I KHG ++ + +
Sbjct: 401 KAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCI 460
Query: 334 VTMYSKCGSIVDSELAFGQT-SQPDIVS-----WNTIIAAFAQHVLYYKARSYFDQMIAV 387
+ M ++ G + E A+ S+ IVS W + A +H ++ Q++++
Sbjct: 461 IDMLARSGYL---EEAYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSM 517
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
R + +++L SV G D ++N LM
Sbjct: 518 EPRKP-VNYINLASVYAANGAWDNALNTRKLM 548
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%)
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
I +GF S+L + + L+ +Y K G + + F + S+ D+VSW +I+ F++ + A
Sbjct: 39 ITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDAL 98
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
F +M V+ + T+ S+L C G + E M +
Sbjct: 99 LLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQI 135
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 171/330 (51%), Gaps = 41/330 (12%)
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
P + V+I+ YVK + A LFD MP+RN +SWT MI+ + ++++A EL
Sbjct: 94 PMMFLVNVLINMYVKFNL---LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150
Query: 219 GRMPQKNV------------------------------------VASTAMITGFCKQGKV 242
M + NV +A+I F K G+
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
++A ++F ++ D WN +I G+AQN R + AL LF +M R G + S+ AC
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC 270
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
LALL+ G Q + ++K +D DL +NNALV MY KCGS+ D+ F Q + D+++W+
Sbjct: 271 TGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWS 328
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
T+I+ AQ+ +A F++M + G +P+ IT + +L C AG +++ F M
Sbjct: 329 TMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKL 388
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEII 452
YGI P EHY C++D++ +AG+L A +++
Sbjct: 389 YGIDPVREHYGCMIDLLGKAGKLDDAVKLL 418
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 157/399 (39%), Gaps = 72/399 (18%)
Query: 11 LKPTPSSTARHTHFLLVFAKHFSSYD--VYRANLNIAAFSRAGNITAARQVFDKMPTKDV 68
+K S+ A H L+ +F+ + ++ N+ I + + + A Q+FD+MP ++V
Sbjct: 68 IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127
Query: 69 VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER 128
++W +M++AY Q + L M NV + Y + +
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRDNVRP---------------NVYTYSSVLRSC 172
Query: 129 NAASYNAMIS-GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF 187
N S M+ G IK G D V + +ID + K+ G A ++F
Sbjct: 173 NGMSDVRMLHCGIIKEGLESD------------VFVRSALIDVFAKL---GEPEDALSVF 217
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWT 247
D M + + W +I G +N + A ELF RM + +A A +T +
Sbjct: 218 DEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLE 277
Query: 248 LFQQIRC------RDIASWNIMITGYAQNGRGEEALNLFSQMVR---------------- 285
L Q +D+ N ++ Y + G E+AL +F+QM
Sbjct: 278 LGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQN 337
Query: 286 ---------------TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDSDLSV 329
+G +P+ + V + AC+ LL+ G + + K +G D
Sbjct: 338 GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREH 397
Query: 330 NNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAA 367
++ + K G + D+ +L +PD V+W T++ A
Sbjct: 398 YGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 31/256 (12%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV ++++ + G P+ + ++FD M + + WN+++ G QN D A F M
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMK 252
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFK--EMPCPNVVSY-------TVMIDGYVKVKEG 177
+ A ++ + R C L + ++V Y ++D Y K
Sbjct: 253 RAGFIAEQATLTSVL---RACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKC--- 306
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF- 236
G + A +F+ M R+ ++W+ MI+GL +NG +EA +LF RM + I G
Sbjct: 307 GSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVL 366
Query: 237 --CKQ-GKVDEAWTLFQQIR-------CRDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
C G +++ W F+ ++ R+ + MI + G+ ++A+ L ++M
Sbjct: 367 FACSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDAVKLLNEM--- 421
Query: 287 GMQPDDLIFVSLFTAC 302
+PD + + +L AC
Sbjct: 422 ECEPDAVTWRTLLGAC 437
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 101/211 (47%), Gaps = 18/211 (8%)
Query: 31 HFSSYD--VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSR 88
H YD + N + + + G++ A +VF++M +DV+TW++M++ +G+ Q +
Sbjct: 285 HIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEAL 344
Query: 89 ALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAM-------PERNAASYNAMI 137
LF+ M N ++ ++ C +L++ + YF +M P R Y MI
Sbjct: 345 KLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMI 402
Query: 138 SGFIKFGRLCDAQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIAR-ARALFDAMPRRNE 195
K G+L DA +L EM C P+ V++ ++ G +V+ +A A A+ +
Sbjct: 403 DLLGKAGKLDDAVKLLNEMECEPDAVTWRTLL-GACRVQRNMVLAEYAAKKVIALDPEDA 461
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
++T++ N + ++ E+ RM + +
Sbjct: 462 GTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
A+ + G+ D + L C S + +G + +G + + N L+
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLIN 104
Query: 336 MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGIT 395
MY K + D+ F Q Q +++SW T+I+A+++ ++ KA M+ VRP+ T
Sbjct: 105 MYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYT 164
Query: 396 FLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ S+L C G D + + + + G+ + L+DV ++ G+ + A +
Sbjct: 165 YSSVLRSC--NGMSD--VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSV 216
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 90/240 (37%), Positives = 146/240 (60%)
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
G A +FG+M ++VV+ T+M+ G+CK G V+ A +F ++ R++ +W+IMI GYA
Sbjct: 166 GFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYA 225
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
+N E+A++LF M R G+ ++ + VS+ ++CA L L+ G + Y V+K +L
Sbjct: 226 KNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLI 285
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
+ ALV M+ +CG I + F + D +SW++II A H +KA YF QMI++G
Sbjct: 286 LGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLG 345
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
P +TF ++LS C G +++ + ++ M D+GI PR EHY C+VD++ RAG+L A
Sbjct: 346 FIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEA 405
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 139/287 (48%), Gaps = 29/287 (10%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DVY N + ++ G I AA ++F +M +DVV+W SM+ Y G +++R +FD MP
Sbjct: 151 DVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQR 151
+N+ +W+ M+ G +N+ ++A + F M N ++IS G L +R
Sbjct: 211 HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGER 270
Query: 152 LF----KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
+ K N++ T ++D + + G I +A +F+ +P + +SW+ +I GL
Sbjct: 271 AYEYVVKSHMTVNLILGTALVDMFWRC---GDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 208 NGLYEEAWELFGRM------PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD----- 256
+G +A F +M P+ V TA+++ G V++ +++ ++ +D
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRD--VTFTAVLSACSHGGLVEKGLEIYENMK-KDHGIEP 384
Query: 257 -IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ + ++ + G+ EA N +M ++P+ I +L AC
Sbjct: 385 RLEHYGCIVDMLGRAGKLAEAENFILKM---HVKPNAPILGALLGAC 428
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 82/140 (58%)
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A+ +F QI+ ++ +N++I ++ +A ++QM+++ + PD++ F L A +
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
+ + G QT++ +++ GF +D+ V N+LV MY+ CG I + FGQ D+VSW ++
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 365 IAAFAQHVLYYKARSYFDQM 384
+A + + + AR FD+M
Sbjct: 190 VAGYCKCGMVENAREMFDEM 209
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 170/333 (51%), Gaps = 42/333 (12%)
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG 219
+V V+I+ Y K G + AR +FD M R+ VSW MI N + EA ++F
Sbjct: 95 DVTLLNVLINAYSKC---GFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFL 151
Query: 220 RMPQK---------------------------------------NVVASTAMITGFCKQG 240
M + N+ TA++ + K G
Sbjct: 152 EMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCG 211
Query: 241 KVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
+ +A +F+ ++ + +W+ M+ GY QN EEAL L+ + R ++ + S+
Sbjct: 212 MIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVIC 271
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
AC++LA L +G+Q +A++ K GF S++ V ++ V MY+KCGS+ +S + F + + ++
Sbjct: 272 ACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL 331
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
WNTII+ FA+H + F++M G+ P+ +TF SLLSVC G ++E F LM
Sbjct: 332 WNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMR 391
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
YG+ P HY+C+VD++ RAG L A E+I+
Sbjct: 392 TTYGLSPNVVHYSCMVDILGRAGLLSEAYELIK 424
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 181/394 (45%), Gaps = 60/394 (15%)
Query: 28 FAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMP----TKDVVTWNSMLTAYWHSGF 83
++ FS+ ++ L + A R G + A+ K+ DV N ++ AY GF
Sbjct: 54 YSNEFSNRNLVHEILQLCA--RNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGF 111
Query: 84 PQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIK- 142
+ +R +FD M +++VSWN M+ +N M EA + F M IS +
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA 171
Query: 143 FGRLCDAQRLFKEMPCPNVVSY--------TVMIDGYVKVKEGGGIARARALFDAMPRRN 194
G CDA K++ C +V + T ++D Y K G I A +F++M ++
Sbjct: 172 CGVNCDALEC-KKLHCLSVKTCIDLNLYVGTALLDLYAKC---GMIKDAVQVFESMQDKS 227
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQ------------------------------- 223
V+W+ M+ G V+N YEEA L+ R +
Sbjct: 228 SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHA 287
Query: 224 --------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEE 275
NV +++ + + K G + E++ +F +++ +++ WN +I+G+A++ R +E
Sbjct: 288 VICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKE 347
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV-IKHGFDSDLSVNNALV 334
+ LF +M + GM P+++ F SL + C L+++GR+ + L+ +G ++ + +V
Sbjct: 348 VMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMV 407
Query: 335 TMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAA 367
+ + G + ++ EL P W +++A+
Sbjct: 408 DILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 4/200 (2%)
Query: 208 NGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
NG EA G++ + +V +I + K G V+ A +F + R + SWN M
Sbjct: 74 NGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTM 133
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I Y +N EAL++F +M G + + S+ +AC + ++ + L +K
Sbjct: 134 IGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCI 193
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
D +L V AL+ +Y+KCG I D+ F V+W++++A + Q+ Y +A + +
Sbjct: 194 DLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRR 253
Query: 384 MIAVGVRPDGITFLSLLSVC 403
+ + + T S++ C
Sbjct: 254 AQRMSLEQNQFTLSSVICAC 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 107/247 (43%), Gaps = 23/247 (9%)
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ER 128
++L Y G + + +F++M K+ V+W++MVAG VQN +EA + E+
Sbjct: 202 ALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 261
Query: 129 NAASYNAMISGFIKFGRLCDAQRLF----KEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
N + +++I L + +++ K NV + +D Y K G + +
Sbjct: 262 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKC---GSLRESY 318
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQG 240
+F + +N W +I+G ++ +E LF +M Q N V +++++ G
Sbjct: 319 IIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTG 378
Query: 241 KVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
V+E F+ +R ++ ++ M+ + G EA L + P I+
Sbjct: 379 LVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI---PFDPTASIW 435
Query: 296 VSLFTAC 302
SL +C
Sbjct: 436 GSLLASC 442
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
+ CA + + + + +I+ + D+++ N L+ YSKCG + + F +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
+VSWNT+I + ++ + +A F +M G + T S+LS C
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC 172
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 186/367 (50%), Gaps = 14/367 (3%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAF-NYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM 156
NV S A V CV ++ ++ R+ + ++ +++ G A++LF EM
Sbjct: 33 NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEM 92
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP------RRNEVSWTVMINGLVENGL 210
P ++VS+ +I GY G + + + M R NEV++ MI+ V G
Sbjct: 93 PERDLVSWNSLISGY---SGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGS 149
Query: 211 YEEAWELFGRMPQKNVVASTAMITGFC----KQGKVDEAWTLFQQIRCRDIASWNIMITG 266
EE + G + + V+ ++ F K G + + LF+ + +++ SWN MI
Sbjct: 150 KEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVI 209
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+ QNG E+ L F+ R G +PD F+++ +C + ++ + + L++ GF +
Sbjct: 210 HLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGN 269
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ AL+ +YSK G + DS F + + PD ++W ++AA+A H A +F+ M+
Sbjct: 270 KCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVH 329
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
G+ PD +TF LL+ C +G ++E + F M Y I PR +HY+C+VD++ R+G LQ
Sbjct: 330 YGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQ 389
Query: 447 RACEIIR 453
A +I+
Sbjct: 390 DAYGLIK 396
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 166/350 (47%), Gaps = 35/350 (10%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG-----FPQHSRALFDAMPMK- 97
+ + R G+ A ++FD+MP +D+V+WNS+++ Y G F SR + + +
Sbjct: 73 VGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRP 132
Query: 98 NVVSWNAMVAGCVQNDMLDEA------FNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
N V++ +M++ CV +E F + E NA I+ + K G L + +
Sbjct: 133 NEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV--NAFINWYGKTGDLTSSCK 190
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR-----NEVSWTVMINGLV 206
LF+++ N+VS+ MI +++ G+A + M RR ++ ++ ++
Sbjct: 191 LFEDLSIKNLVSWNTMIVIHLQ----NGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 207 ENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
+ G+ A + G + N +TA++ + K G+++++ T+F +I D +W
Sbjct: 247 DMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTA 306
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-H 321
M+ YA +G G +A+ F MV G+ PD + F L AC+ L+++G+ + + K +
Sbjct: 307 MLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRY 366
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAA 367
D L + +V + + G + D A+G +P W ++ A
Sbjct: 367 RIDPRLDHYSCMVDLLGRSGLLQD---AYGLIKEMPMEPSSGVWGALLGA 413
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 110/240 (45%), Gaps = 32/240 (13%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V N I + + G++T++ ++F+ + K++V+WN+M+ + +G + A F+ M
Sbjct: 168 EVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MS 226
Query: 96 MK-----NVVSWNAMVAGCVQNDMLDEA--------FNYFAAMPERNAASYNAMISGFIK 142
+ + ++ A++ C ++ A F F+ N A++ + K
Sbjct: 227 RRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSG----NKCITTALLDLYSK 282
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR-ARALFDAMPRR----NEVS 197
GRL D+ +F E+ P+ +++T M+ Y G R A F+ M + V+
Sbjct: 283 LGRLEDSSTVFHEITSPDSMAWTAMLAAYAT----HGFGRDAIKHFELMVHYGISPDHVT 338
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTLFQQI 252
+T ++N +GL EE F M ++ + + M+ + G + +A+ L +++
Sbjct: 339 FTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEM 398
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 184 bits (468), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 123/449 (27%), Positives = 203/449 (45%), Gaps = 45/449 (10%)
Query: 50 AGNITAARQVFDKMPTKDVVTWNSMLTA------------------------------YW 79
G+++ A ++F K+P DVV WN+M+ +
Sbjct: 81 GGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFL 140
Query: 80 HSGFPQHSRALFDAMPM----------KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN 129
+G + AL + N+ NA+V ++D A F + +
Sbjct: 141 LNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKED 200
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARA 185
S+N MISG+ + ++ L EM P V+ +++ KVK+ R
Sbjct: 201 VFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHE 260
Query: 186 LFDAMPRRNEVSW-TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDE 244
+ ++N G + A +F M ++V++ T+++ G+ ++G +
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKL 320
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A T F Q+ RD SW IMI GY + G E+L +F +M GM PD+ VS+ TACA
Sbjct: 321 ARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAH 380
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
L L+ G + K+ +D+ V NAL+ MY KCG ++ F Q D +W +
Sbjct: 381 LGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAM 440
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
+ A + +A F QM + ++PD IT+L +LS C +G +D++ F M D+
Sbjct: 441 VVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHR 500
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
I P HY C+VD++ RAG ++ A EI+R
Sbjct: 501 IEPSLVHYGCMVDMLGRAGLVKEAYEILR 529
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 180/386 (46%), Gaps = 54/386 (13%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
++Y N + +S G + AR VFD+ +DV +WN M++ Y + S L M
Sbjct: 169 NLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEME 228
Query: 96 MKNVVSWNA-----MVAGCVQ---NDMLDEAFNYFA-AMPERNAASYNAMISGFIKFGRL 146
+N+VS + +++ C + D+ Y + E + NA+++ + G +
Sbjct: 229 -RNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEM 287
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
A R+F+ M +V+S+T ++ GYV E G + AR FD MP R+ +SWT+MI+G +
Sbjct: 288 DIAVRIFRSMKARDVISWTSIVKGYV---ERGNLKLARTYFDQMPVRDRISWTIMIDGYL 344
Query: 207 ENGLYEEAWELF------GRMP---------------------------------QKNVV 227
G + E+ E+F G +P + +VV
Sbjct: 345 RAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVV 404
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
A+I + K G ++A +F + RD +W M+ G A NG+G+EA+ +F QM
Sbjct: 405 VGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMS 464
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
+QPDD+ ++ + +AC ++DQ R+ +A + H + L +V M + G + ++
Sbjct: 465 IQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEA 524
Query: 347 -ELAFGQTSQPDIVSWNTIIAAFAQH 371
E+ P+ + W ++ A H
Sbjct: 525 YEILRKMPMNPNSIVWGALLGASRLH 550
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 194/415 (46%), Gaps = 47/415 (11%)
Query: 85 QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGF 140
+++ +FD M NVV+W M+ C+Q EA +F M E + + +++ S
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 141 IKFGRLCDAQRLFKEMPCPNVVS--YTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSW 198
+ L ++L +V ++D Y K G + R +FD M + +SW
Sbjct: 280 AELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 199 TVMINGLVEN-GLYEEAWELFGRMPQK--------------------------------- 224
T +I G ++N L EA LF M +
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 225 -------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
N + ++I+ F K ++++A F+ + +++ S+N + G +N E+A
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
L S++ + F SL + A++ + +G Q ++ V+K G + V NAL++MY
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMY 519
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
SKCGSI + F +++SW ++I FA+H + F+QMI GV+P+ +T++
Sbjct: 520 SKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYV 579
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
++LS C G + E FN M D+ I P+ EHYAC+VD++ RAG L A E I
Sbjct: 580 AILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 198/458 (43%), Gaps = 60/458 (13%)
Query: 49 RAGNITAARQV-FDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM---PMKNVVSWNA 104
R G + AR + FD P D V +NS+++ Y SG + +F+ M ++VVSW+A
Sbjct: 79 RLGKLVHARLIEFDIEP--DSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSA 136
Query: 105 MVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMI-----SGFIKFGRLCDAQRLFKE 155
M+A N +A F E N Y A+I S F+ GR+ +
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG 196
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
+V +ID +VK + A +FD M N V+WT+MI ++ G EA
Sbjct: 197 HFESDVCVGCSLIDMFVKGE--NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAI 254
Query: 216 ELF------GRMPQKNVVAST-------------------------------AMITGFCK 238
F G K ++S +++ + K
Sbjct: 255 RFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAK 314
Query: 239 ---QGKVDEAWTLFQQIRCRDIASWNIMITGYAQN-GRGEEALNLFSQMVRTG-MQPDDL 293
G VD+ +F ++ + SW +ITGY +N EA+NLFS+M+ G ++P+
Sbjct: 315 CSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
F S F AC +L+ G+Q K G S+ SV N++++M+ K + D++ AF
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
S+ ++VS+NT + +++ + +A ++ + TF SLLS G I +
Sbjct: 435 SEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ + +V G+ L+ + S+ G + A +
Sbjct: 495 QIHSQVVK-LGLSCNQPVCNALISMYSKCGSIDTASRV 531
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 166/350 (47%), Gaps = 29/350 (8%)
Query: 45 AAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS-GFPQHSRALFDAMPMK-----N 98
A S G++ R+VFD+M V++W +++T Y + + LF M + N
Sbjct: 313 AKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPN 372
Query: 99 VVSWNAMVAGC-------VQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
++++ C V +L +AF A N++ N++IS F+K R+ DAQR
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLA---SNSSVANSVISMFVKSDRMEDAQR 429
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVE 207
F+ + N+VSY +DG + +A L + R + ++ +++G+
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCR---NLNFEQAFKLLSEITERELGVSAFTFASLLSGVAN 486
Query: 208 NGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
G + ++ ++ + N A+I+ + K G +D A +F + R++ SW M
Sbjct: 487 VGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSM 546
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG-RQTYALVIKHG 322
ITG+A++G L F+QM+ G++P+++ +V++ +AC+ + L+ +G R ++ H
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHK 606
Query: 323 FDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ +V + + G + D+ E Q D++ W T + A H
Sbjct: 607 IKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 172/378 (45%), Gaps = 57/378 (15%)
Query: 50 AGNITAARQVFDKMPTK-----DVVTWNSMLTAY-----WHSGFPQHSRAL-FDAMPMKN 98
AG++ A D M D VT++S+L + + G H+R + FD P +
Sbjct: 39 AGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEP--D 96
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAM---PERNAASYNAMISGFIKFGRLCDAQRLFKE 155
V +N++++ ++ +A + F M +R+ S++AM++ + GR DA ++F E
Sbjct: 97 SVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE 156
Query: 156 MP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
PN YT +I A + + F + R V + L++ G +
Sbjct: 157 FLELGLVPNDYCYTAVIR-----------ACSNSDFVGVGR-------VTLGFLMKTGHF 198
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCK-QGKVDEAWTLFQQIRCRDIASWNIMITGYAQN 270
E +V ++I F K + + A+ +F ++ ++ +W +MIT Q
Sbjct: 199 E-----------SDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQM 247
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
G EA+ F MV +G + D S+F+ACA L L G+Q ++ I+ G D V
Sbjct: 248 GFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VE 305
Query: 331 NALVTMYSKC---GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV-LYYKARSYFDQMIA 386
+LV MY+KC GS+ D F + ++SW +I + ++ L +A + F +MI
Sbjct: 306 CSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMIT 365
Query: 387 VG-VRPDGITFLSLLSVC 403
G V P+ TF S C
Sbjct: 366 QGHVEPNHFTFSSAFKAC 383
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 14/199 (7%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK--- 97
N I+ +S+ G+I A +VF+ M ++V++W SM+T + GF F+ M +
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 98 -NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNA-----ASYNAMISGFIKFGRLCDAQR 151
N V++ A+++ C ++ E + +F +M E + Y M+ + G L DA
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFE 632
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMINGLVE-N 208
MP V G +V + + AR + + P NE + + ++ +
Sbjct: 633 FINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDP--NEPAAYIQLSNIYACA 690
Query: 209 GLYEEAWELFGRMPQKNVV 227
G +EE+ E+ +M ++N+V
Sbjct: 691 GKWEESTEMRRKMKERNLV 709
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 212/432 (49%), Gaps = 68/432 (15%)
Query: 72 NSMLTAYWHSGFP--QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP--- 126
NS+L+ Y+ G P + +R +FD +K+ +SW +M++G V +A F M
Sbjct: 100 NSLLSLYFKLG-PGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFG 158
Query: 127 -ERNAASYNAMIS-----GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGI 180
+ N + ++ + G ++ GR + + +S T+ Y+ G+
Sbjct: 159 LDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTL---AYLY-----GV 210
Query: 181 AR----ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF-------GRMPQ------ 223
R AR +FD MP + + WT +++ +N LYEEA LF G +P
Sbjct: 211 NREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGT 270
Query: 224 ---------------------------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
NVV ++++ + K G V EA +F + ++
Sbjct: 271 VLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKN 330
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
SW+ ++ GY QNG E+A+ +F +M + D F ++ ACA LA + G++ +
Sbjct: 331 SVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAAVRLGKEIHG 386
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
++ G ++ V +AL+ +Y K G I + + + S ++++WN +++A AQ+ +
Sbjct: 387 QYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEE 446
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
A S+F+ M+ G++PD I+F+++L+ C G +DE N F LM YGI P +EHY+C++
Sbjct: 447 AVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMI 506
Query: 437 DVMSRAGQLQRA 448
D++ RAG + A
Sbjct: 507 DLLGRAGLFEEA 518
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 121/293 (41%), Gaps = 56/293 (19%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+ + G++ ARQVF+ M K+ V+W+++L Y +G + + +F M K++ + ++
Sbjct: 310 YGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVL 369
Query: 107 AGCV-----------------------------------QNDMLDEAFNYFAAMPERNAA 131
C ++ +D A ++ M RN
Sbjct: 370 KACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMI 429
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALF 187
++NAM+S + GR +A F +M P+ +S+ ++ G + R F
Sbjct: 430 TWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL---TACGHTGMVDEGRNYF 486
Query: 188 DAMPRRNEVS-----WTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKV 242
M + + ++ MI+ L GL+EEA L R +N + ++ G C
Sbjct: 487 VLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANA- 545
Query: 243 DEAWTLFQQIRCRDIA-------SWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+A + ++I R + S+ ++ Y GR +ALN+ MVR G+
Sbjct: 546 -DASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGV 597
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
I + ++G I +A +V+ KM ++++TWN+ML+A +G + + + F+ M K +
Sbjct: 404 IDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDY 463
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQRLFK 154
+S+ A++ C M+DE NYF M + Y+ MI + G +A+ L +
Sbjct: 464 ISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLE 523
Query: 155 EMPCPNVVS 163
C N S
Sbjct: 524 RAECRNDAS 532
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
G+ EA+ + + + + ++ SL C + G Q +A V+K G ++D +V
Sbjct: 40 GQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVG 99
Query: 331 NALVTMYSKCG-SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
N+L+++Y K G + ++ F D +SW ++++ + + KA F +M++ G+
Sbjct: 100 NSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGL 159
Query: 390 RPDGITFLSLLSVCCRAGKI 409
+ T S + C G++
Sbjct: 160 DANEFTLSSAVKACSELGEV 179
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 194/415 (46%), Gaps = 50/415 (12%)
Query: 85 QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFG 144
++S LF N+ +N+++ G V N + E + F ++ + + +K
Sbjct: 62 KYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKAC 121
Query: 145 RLCDAQRLFKEM-----PC---PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
+++L ++ C +V + T ++ Y G + A LFD +P R+ V
Sbjct: 122 TRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIY---SGSGRLNDAHKLFDEIPDRSVV 178
Query: 197 SWTVMINGLVENGLYEEAWELFGRMP---------------------------------- 222
+WT + +G +G + EA +LF +M
Sbjct: 179 TWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYM 238
Query: 223 -----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
QKN T ++ + K GK+++A ++F + +DI +W+ MI GYA N +E +
Sbjct: 239 EEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
LF QM++ ++PD V ++CASL LD G +L+ +H F ++L + NAL+ MY
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMY 358
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+KCG++ F + + DIV N I+ A++ + + F Q +G+ PDG TFL
Sbjct: 359 AKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
LL C AG I + + FN + Y + EHY C+VD+ RAG L A +I
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI 473
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 180/407 (44%), Gaps = 28/407 (6%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
++DV ++ +S +G + A ++FD++P + VVTW ++ + Y SG + + LF
Sbjct: 143 NHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKK 202
Query: 94 MPMKNVVSWN----AMVAGCVQNDMLDEA---FNYFAAMP-ERNAASYNAMISGFIKFGR 145
M V + +++ CV LD Y M ++N+ +++ + K G+
Sbjct: 203 MVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGK 262
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVK---VKEGGGIARARALFDAMPRRNEVSWTVMI 202
+ A+ +F M ++V+++ MI GY KEG LF M + N I
Sbjct: 263 MEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEG------IELFLQMLQENLKPDQFSI 316
Query: 203 NGLVEN-------GLYEEAWELFGRMP-QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
G + + L E L R N+ + A+I + K G + + +F++++
Sbjct: 317 VGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKE 376
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
+DI N I+G A+NG + + +F Q + G+ PD F+ L C L+ G +
Sbjct: 377 KDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRF 436
Query: 315 Y-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHV 372
+ A+ + + +V ++ + G + D+ L +P+ + W +++
Sbjct: 437 FNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVK 496
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
A + ++IA+ G ++ L ++ G+ DE+ + ++M
Sbjct: 497 DTQLAETVLKELIALEPWNAG-NYVQLSNIYSVGGRWDEAAEVRDMM 542
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 104/215 (48%), Gaps = 3/215 (1%)
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
T F +Q K ++ LF + +I +N +I G+ N E L+LF + + G+
Sbjct: 55 TLFFRQTKY--SYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGF 112
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
F + AC + G ++LV+K GF+ D++ +L+++YS G + D+ F +
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI 172
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
+V+W + + + + +A F +M+ +GV+PD + +LS C G +D
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE 232
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ M + + S LV++ ++ G++++A
Sbjct: 233 WIVKYM-EEMEMQKNSFVRTTLVNLYAKCGKMEKA 266
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 134/323 (41%), Gaps = 30/323 (9%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFS---SYDVYRANLNIAAFSRAGNITAARQVF 60
S++ AL +++ RH + +F K D Y ++A G++ + +
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 61 DKMPT----KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLD 116
M K+ +++ Y G + +R++FD+M K++V+W+ M+ G N
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 117 EAFNYFAAMPERNAASYNAMISGFI----KFGRLCDAQ----RLFKEMPCPNVVSYTVMI 168
E F M + N I GF+ G L + + + N+ +I
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALI 355
Query: 169 DGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV- 227
D Y K G +AR +F M ++ V I+GL +NG + ++ +FG+ + +
Sbjct: 356 DMYAKC---GAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISP 412
Query: 228 -AST--AMITGFCKQGKVDEAWTLFQQIRC-----RDIASWNIMITGYAQNGRGEEALNL 279
ST ++ G G + + F I C R + + M+ + + G ++A L
Sbjct: 413 DGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRL 472
Query: 280 FSQMVRTGMQPDDLIFVSLFTAC 302
M M+P+ +++ +L + C
Sbjct: 473 ICDM---PMRPNAIVWGALLSGC 492
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/471 (26%), Positives = 218/471 (46%), Gaps = 62/471 (13%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLT 76
S +R+ + + K + +++ N+ I FS + N P + + + ML
Sbjct: 98 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSESEN-----------PKESFLLYKQMLR 146
Query: 77 AYWHSGFPQHSR--ALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN 134
P H LF + S M+ G V L E + +N
Sbjct: 147 HGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRL-----------ELVSHVHN 195
Query: 135 AMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG----------------- 177
A I F G + +A+++F E P ++VS+ +I+GY K+ E
Sbjct: 196 ASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKP 255
Query: 178 ---------------GGIARARALFDAMPRRNEVSWTV-MINGLVEN----GLYEEAWEL 217
G + R + ++ + + N + T+ ++N L++ G EA +
Sbjct: 256 DDVTMIGLVSSCSMLGDLNRGKEFYEYV-KENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 218 FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
F + ++ +V+ T MI+G+ + G +D + LF + +D+ WN MI G Q RG++AL
Sbjct: 315 FDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDAL 374
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
LF +M + +PD++ + +AC+ L LD G + + K+ ++++ +LV MY
Sbjct: 375 ALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMY 434
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+KCG+I ++ F + +++ II A H A SYF++MI G+ PD ITF+
Sbjct: 435 AKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFI 494
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
LLS CC G I + F+ M + + P+ +HY+ +VD++ RAG L+ A
Sbjct: 495 GLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEA 545
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/380 (23%), Positives = 170/380 (44%), Gaps = 52/380 (13%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV- 99
N +I F+ G++ AR+VFD+ P +D+V+WN ++ Y G + + ++ M + V
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254
Query: 100 ---VSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRL 152
V+ +V+ C L+ ++ + E NA++ F K G + +A+R+
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
Query: 153 FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
F + +VS+T MI GY + G + +R LFD M ++ V W MI G V+ +
Sbjct: 315 FDNLEKRTIVSWTTMISGYARC---GLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 213 EAWELFGRM------PQK---------------------------------NVVASTAMI 233
+A LF M P + NV T+++
Sbjct: 372 DALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLV 431
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ K G + EA ++F I+ R+ ++ +I G A +G A++ F++M+ G+ PD++
Sbjct: 432 DMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEI 491
Query: 294 IFVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-LAFG 351
F+ L +AC ++ GR ++ + + + L + +V + + G + +++ L
Sbjct: 492 TFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMES 551
Query: 352 QTSQPDIVSWNTIIAAFAQH 371
+ D W ++ H
Sbjct: 552 MPMEADAAVWGALLFGCRMH 571
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 7/229 (3%)
Query: 229 STAMITGFCKQGK---VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
+++ + FC + +D + + + I +I SWN+ I G++++ +E+ L+ QM+R
Sbjct: 87 ASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLR 146
Query: 286 TGM---QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
G +PD + LF CA L L G V+K + V+NA + M++ CG
Sbjct: 147 HGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGD 206
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ ++ F ++ D+VSWN +I + + KA + M + GV+PD +T + L+S
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
C G ++ + V + G+ L+D+ S+ G + A I
Sbjct: 267 CSMLGDLNRGKEFYEY-VKENGLRMTIPLVNALMDMFSKCGDIHEARRI 314
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 212/467 (45%), Gaps = 54/467 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV N + + + G + A F ++ +WN++++ Y +G + LF MP
Sbjct: 141 DVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMP 200
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
NVVSWN +++G V A + M + +K + K+
Sbjct: 201 QPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQ 259
Query: 156 MPCPNVVS--------YTVMIDGYVKVKEGGGIARARALF--DAMPRRNEVS-WTVMING 204
+ C V S + +ID Y G + A +F + + + V+ W M++G
Sbjct: 260 LHCCVVKSGLESSPFAISALIDMYSNC---GSLIYAADVFHQEKLAVNSSVAVWNSMLSG 316
Query: 205 LVENGLYEEAWELFGRMPQKNV-------------------------VASTAMITGF--- 236
+ N E A L ++ Q ++ V S +++G+
Sbjct: 317 FLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELD 376
Query: 237 -----------CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
G + +A LF ++ +DI +++ +I G ++G A LF ++++
Sbjct: 377 YIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIK 436
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
G+ D I ++ C+SLA L G+Q + L IK G++S+ ALV MY KCG I +
Sbjct: 437 LGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDN 496
Query: 346 SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
+ F + D+VSW II F Q+ +A YF +MI +G+ P+ +TFL LLS C
Sbjct: 497 GVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRH 556
Query: 406 AGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+G ++E+ + M +YG+ P EHY C+VD++ +AG Q A E+I
Sbjct: 557 SGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELI 603
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 197/470 (41%), Gaps = 56/470 (11%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
K S +V+ AN I+ + ++ A +VFD+M +++VTW +M++ Y G P +
Sbjct: 33 KQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIE 92
Query: 90 LFDAM-----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN----AASYNAMISGF 140
L+ M N ++A++ C + + + + N N+++ +
Sbjct: 93 LYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMY 152
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
+K GRL +A FKE+ P+ S+ +I GY K G + A LF MP+ N VSW
Sbjct: 153 VKNGRLIEANSSFKEILRPSSTSWNTLISGYCK---AGLMDEAVTLFHRMPQPNVVSWNC 209
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVV--------------------------------- 227
+I+G V+ G A E RM ++ +V
Sbjct: 210 LISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSG 268
Query: 228 ------ASTAMITGFCKQGKVDEAWTLFQQIRC---RDIASWNIMITGYAQNGRGEEALN 278
A +A+I + G + A +F Q + +A WN M++G+ N E AL
Sbjct: 269 LESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALW 328
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
L Q+ ++ + D C + L G Q ++LV+ G++ D V + LV +++
Sbjct: 329 LLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHA 388
Query: 339 KCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
G+I D+ F + DI++++ +I + A F ++I +G+ D +
Sbjct: 389 NVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSN 448
Query: 399 LLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+L VC + + L + G LVD+ + G++
Sbjct: 449 ILKVCSSLASLGWGKQIHGLCIKK-GYESEPVTATALVDMYVKCGEIDNG 497
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 119/238 (50%), Gaps = 13/238 (5%)
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
G + DA +LF +P ++++++ +I G VK G + A LF + + + +++
Sbjct: 391 GNIQDAHKLFHRLPNKDIIAFSGLIRGCVK---SGFNSLAFYLFRELIKLGLDADQFIVS 447
Query: 204 GLVE--NGLYEEAW--ELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR 255
+++ + L W ++ G +K V +TA++ + K G++D LF + R
Sbjct: 448 NILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLER 507
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
D+ SW +I G+ QNGR EEA F +M+ G++P+ + F+ L +AC LL++ R T
Sbjct: 508 DVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTL 567
Query: 316 -ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ ++G + L +V + + G ++ EL +PD W +++ A H
Sbjct: 568 ETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTH 625
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 120/447 (26%), Positives = 213/447 (47%), Gaps = 16/447 (3%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLT 76
S R H V AK D N I+ +S+ + +A +F +M K V+WN+M+
Sbjct: 168 SQGRSVHG--VAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIG 225
Query: 77 AYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE--RNAASYN 134
AY SG + + +F M KNV + + + E + + +
Sbjct: 226 AYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVT 285
Query: 135 AMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP--- 191
+++ + + G L A+RL+ ++V T ++ Y E G + A F
Sbjct: 286 SLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYA---EKGDMDIAVVYFSKTRQLC 342
Query: 192 -RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAW 246
+ + V+ +++G ++ + L G + + T +IT + K V+
Sbjct: 343 MKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVL 402
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASL 305
LF+Q++ + SWN +I+G Q+GR A +F QM+ TG + PD + SL C+ L
Sbjct: 403 FLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQL 462
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L+ G++ + +++ F+++ V AL+ MY+KCG+ V +E F P +WN++I
Sbjct: 463 CCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMI 522
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+ ++ L ++A S + +M G++PD ITFL +LS C G +DE F M+ ++GI
Sbjct: 523 SGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGI 582
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEII 452
P +HYA +V ++ RA A +I
Sbjct: 583 SPTLQHYALMVGLLGRACLFTEALYLI 609
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 195/432 (45%), Gaps = 23/432 (5%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
VY + + + G +T+A+ +FD+MP +D V WN+++ Y +G+ + LF M
Sbjct: 85 VYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQ 144
Query: 97 K----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCD 148
+ + + ++ C Q + + + E ++ NA+IS + K L
Sbjct: 145 QGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGS 204
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN-EVSWTVMINGLVE 207
A+ LF+EM + VS+ MI Y + G A +F M +N E+S +IN L
Sbjct: 205 AEVLFREMKDKSTVSWNTMIGAY---SQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
Query: 208 NGLYEEAWELFGRMPQKN-VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
+ +E L + N + T+++ + + G + A L+ + I +++
Sbjct: 262 HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSC 321
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
YA+ G + A+ FS+ + M+ D + V + C + +D G + IK G +
Sbjct: 322 YAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTK 381
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
V N L+TMYSK + F Q + ++SWN++I+ Q A F QM+
Sbjct: 382 TLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMML 441
Query: 387 V-GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP--RSEHYAC--LVDVMSR 441
G+ PD IT SLL+ C + ++ L H Y + +E++ C L+D+ ++
Sbjct: 442 TGGLLPDAITIASLLAGCSQLCCLNLGKEL-----HGYTLRNNFENENFVCTALIDMYAK 496
Query: 442 AGQLQRACEIIR 453
G +A + +
Sbjct: 497 CGNEVQAESVFK 508
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 92/204 (45%), Gaps = 9/204 (4%)
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF-----TACASLALLD 309
RD++ ++ ++ + +F ++R+ + P+ +S+F T+ S L
Sbjct: 11 RDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFT-MSIFLQATTTSFNSFKLQV 69
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFA 369
+ QT+ + K G D + V +L+ +Y K G + +++ F + + D V WN +I ++
Sbjct: 70 EQVQTH--LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRS 429
++ A F M+ G P T ++LL C + G + + ++ + G+ S
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKS-GLELDS 186
Query: 430 EHYACLVDVMSRAGQLQRACEIIR 453
+ L+ S+ +L A + R
Sbjct: 187 QVKNALISFYSKCAELGSAEVLFR 210
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 190/435 (43%), Gaps = 87/435 (20%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMP-MKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
DV N +L Y + LF+ M KN V+W +M+ G QN +A F +
Sbjct: 159 DVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDL 218
Query: 126 PERNAASYNAMISGFIKFGRLCDAQRLFKEMPC--------PNVVSYTVMIDGYVKVKEG 177
S + A R+ ++ C N+ + +ID Y K +E
Sbjct: 219 RREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCRE- 277
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----------- 226
+ ARAL + M + VSW MI G V GL EA +FGRM ++++
Sbjct: 278 --MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Query: 227 -----------------------------VASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
+ + A++ + K+G +D A +F+ + +D+
Sbjct: 336 NCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDV 395
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SW ++TG NG +EAL LF M G+ PD ++ S+ +A A L LL+ G+Q +
Sbjct: 396 ISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGN 455
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
IK GF S LSVNN+LVTMY+KCGS+ D+ + F D+++W +I +A++ L A
Sbjct: 456 YIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDA 515
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+ YFD M V YGI P EHYAC++D
Sbjct: 516 QRYFDSMRTV-----------------------------------YGITPGPEHYACMID 540
Query: 438 VMSRAGQLQRACEII 452
+ R+G + +++
Sbjct: 541 LFGRSGDFVKVEQLL 555
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 128/468 (27%), Positives = 209/468 (44%), Gaps = 73/468 (15%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+NL + S++G + ARQ+FDKMP +D TWN+M+ AY +S + LF + P+KN
Sbjct: 31 SNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNT 90
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
+SWNA+++G ++ EAFN F M + + N G + R+C + L +
Sbjct: 91 ISWNALISGYCKSGSKVEAFNLFWEM-QSDGIKPNEYTLGSVL--RMCTSLVLL--LRGE 145
Query: 160 NVVSYTV---------MIDG----YVKVKEGGGIARARALFDAMP-RRNEVSWTVMINGL 205
+ +T+ +++G Y + K I+ A LF+ M +N V+WT M+ G
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKR---ISEAEYLFETMEGEKNNVTWTSMLTGY 202
Query: 206 VENGLYEEAWELFGRMPQK---------------------------------------NV 226
+NG +A E F + ++ N+
Sbjct: 203 SQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNI 262
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
+A+I + K +++ A L + + D+ SWN MI G + G EAL++F +M
Sbjct: 263 YVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHER 322
Query: 287 GMQPDDLIFVSLFTACA-SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD 345
M+ DD S+ A S + + L++K G+ + VNNALV MY+K G I+D
Sbjct: 323 DMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRG-IMD 381
Query: 346 SEL-AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
S L F + D++SW ++ + Y +A F M G+ PD I S+LS
Sbjct: 382 SALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASA 441
Query: 405 RAGKIDESMNLFNLMVH----DYGIPPRSEHYACLVDVMSRAGQLQRA 448
++ F VH G P LV + ++ G L+ A
Sbjct: 442 ELTLLE-----FGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDA 484
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 121/221 (54%), Gaps = 6/221 (2%)
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQI 252
R ++ +++ L ++G +EA ++F +MP+++ MI + ++ +A LF+
Sbjct: 26 RTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSN 85
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
++ SWN +I+GY ++G EA NLF +M G++P++ S+ C SL LL +G
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGE 145
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF-GQTSQPDIVSWNTIIAAFAQH 371
Q + IK GFD D++V N L+ MY++C I ++E F + + V+W +++ ++Q+
Sbjct: 146 QIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQN 205
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVC-----CRAG 407
+KA F + G + + TF S+L+ C CR G
Sbjct: 206 GFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVG 246
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 159/384 (41%), Gaps = 87/384 (22%)
Query: 85 QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFG 144
+ +RAL + M + +VVSWN+M+ GCV+ ++ EA + F M ER+ + I +
Sbjct: 279 ESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCF 338
Query: 145 RLCDAQ-RLFKEMPCPNV----VSYTVMIDGYVKVKEGGGIA-RARALFDAMPRRNEVSW 198
L + ++ C V +Y ++ + V + GI A +F+ M ++ +SW
Sbjct: 339 ALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISW 398
Query: 199 TVMINGLVENGLYEEAWELFGRM------PQKNVVAS----------------------- 229
T ++ G NG Y+EA +LF M P K V AS
Sbjct: 399 TALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIK 458
Query: 230 ----------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNL 279
+++T + K G +++A +F + RD+ +W +I GYA+NG E+A
Sbjct: 459 SGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRY 518
Query: 280 FSQMVRT--GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
F M RT G+ P G + YA ++ ++
Sbjct: 519 FDSM-RTVYGITP--------------------GPEHYA---------------CMIDLF 542
Query: 338 SKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD-GIT 395
+ G V E Q +PD W I+AA +H ++ + P+ +
Sbjct: 543 GRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMEL--EPNNAVP 600
Query: 396 FLSLLSVCCRAGKIDESMNLFNLM 419
++ L ++ AG+ DE+ N+ LM
Sbjct: 601 YVQLSNMYSAAGRQDEAANVRRLM 624
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 25/221 (11%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM------ 125
N+++ Y G + +F+ M K+V+SW A+V G N DEA F M
Sbjct: 368 NALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGIT 427
Query: 126 PER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
P++ + S +A ++ ++FG+ + P V+ + ++ Y K G +
Sbjct: 428 PDKIVTASVLSASAELT-LLEFGQQVHGNYIKSGFPSSLSVNNS-LVTMYTKC---GSLE 482
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST-------AMIT 234
A +F++M R+ ++WT +I G +NGL E+A F M + V T MI
Sbjct: 483 DANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFDSM--RTVYGITPGPEHYACMID 540
Query: 235 GFCKQGKVDEAWTLFQQIRCR-DIASWNIMITGYAQNGRGE 274
F + G + L Q+ D W ++ ++G E
Sbjct: 541 LFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIE 581
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 177/362 (48%), Gaps = 27/362 (7%)
Query: 105 MVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSY 164
++ C D +D A++ F+ + N Y AMI GF+ GR D L+ M +V+
Sbjct: 67 LIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPD 126
Query: 165 TVMIDGYVK--------------VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
+I +K +K G G +R+ L M+ ++G
Sbjct: 127 NYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGL-------------KMMEIYGKSGE 173
Query: 211 YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQN 270
A ++F MP ++ VA+T MI + + G + EA LFQ ++ +D W MI G +N
Sbjct: 174 LVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRN 233
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
+AL LF +M + ++ V + +AC+ L L+ GR ++ V + V
Sbjct: 234 KEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVG 293
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
NAL+ MYS+CG I ++ F D++S+NT+I+ A H +A + F M+ G R
Sbjct: 294 NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFR 353
Query: 391 PDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACE 450
P+ +T ++LL+ C G +D + +FN M + + P+ EHY C+VD++ R G+L+ A
Sbjct: 354 PNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYR 413
Query: 451 II 452
I
Sbjct: 414 FI 415
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 147/339 (43%), Gaps = 31/339 (9%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT 65
+++ LK R H ++ SS V + I + ++G + A+++FD+MP
Sbjct: 129 VITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEI--YGKSGELVNAKKMFDEMPD 186
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
+D V M+ Y GF + + LF + +K+ V W AM+ G V+N +++A F M
Sbjct: 187 RDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM 246
Query: 126 PERN--AASYNAMIS-------GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE 176
N A + A+ G ++ GR + + M N V +I+ Y +
Sbjct: 247 QMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVG-NALINMYSRC-- 303
Query: 177 GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAM 232
G I AR +F M ++ +S+ MI+GL +G EA F M + N V A+
Sbjct: 304 -GDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVAL 362
Query: 233 ITGFCKQGKVDEAWTLFQQIR-----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
+ G +D +F ++ I + ++ + GR EEA +
Sbjct: 363 LNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENI---P 419
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
++PD ++ +L +AC ++ G + + K F+S+
Sbjct: 420 IEPDHIMLGTLLSACKIHGNMELGEK----IAKRLFESE 454
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 116/399 (29%), Positives = 185/399 (46%), Gaps = 77/399 (19%)
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMI----------------------- 168
S N +I K G+L A R+ + P+ +Y ++I
Sbjct: 48 SNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNG 107
Query: 169 ---DGYVKVK------EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG 219
D ++ K + G + AR +FD +R W + L G EE L+
Sbjct: 108 SDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYW 167
Query: 220 RMPQ--------------KNVVAS-----------------------------TAMITGF 236
+M + K VAS T ++ +
Sbjct: 168 KMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMY 227
Query: 237 CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ--PDDLI 294
+ G VD A +F + R++ SW+ MI YA+NG+ EAL F +M+R P+ +
Sbjct: 228 ARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVT 287
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
VS+ ACASLA L+QG+ + +++ G DS L V +ALVTMY +CG + + F +
Sbjct: 288 MVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMN 414
D+VSWN++I+++ H KA F++M+A G P +TF+S+L C G ++E
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407
Query: 415 LFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
LF M D+GI P+ EHYAC+VD++ RA +L A ++++
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 170/375 (45%), Gaps = 31/375 (8%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H L + S D + A I +S G++ AR+VFDK + + WN++ A
Sbjct: 100 HRHIL----DNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTL 155
Query: 81 SGFPQHSRALFDAMPMKNVVS----WNAMVAGCVQND----MLDEAFNYFAAMPERNAAS 132
+G + L+ M V S + ++ CV ++ L + A + R +S
Sbjct: 156 AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSS 215
Query: 133 Y----NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFD 188
+ ++ + +FG + A +F MP NVVS++ MI Y K G A F
Sbjct: 216 HVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAK---NGKAFEALRTFR 272
Query: 189 AMPRR------NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA----STAMITGFCK 238
M R N V+ ++ E+ + G + ++ + + +A++T + +
Sbjct: 273 EMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGR 332
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
GK++ +F ++ RD+ SWN +I+ Y +G G++A+ +F +M+ G P + FVS+
Sbjct: 333 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSV 392
Query: 299 FTACASLALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVD-SELAFGQTSQP 356
AC+ L+++G++ + + + HG + +V + + + + +++ ++P
Sbjct: 393 LGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEP 452
Query: 357 DIVSWNTIIAAFAQH 371
W +++ + H
Sbjct: 453 GPKVWGSLLGSCRIH 467
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
+ + R G + ++VFD+M +DVV+WNS++++Y G+ + + +F+ M
Sbjct: 327 VTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTP 386
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNA-----ASYNAMISGFIKFGRLCDAQRLFK 154
V++ +++ C +++E F M + Y M+ + RL +A ++ +
Sbjct: 387 VTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
Query: 155 EM---PCPNV---VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
+M P P V + + I G V++ E +R LF P +N ++ ++ + E
Sbjct: 447 DMRTEPGPKVWGSLLGSCRIHGNVELAERA----SRRLFALEP-KNAGNYVLLADIYAEA 501
Query: 209 GLYEE 213
+++E
Sbjct: 502 QMWDE 506
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 183/357 (51%), Gaps = 43/357 (12%)
Query: 137 ISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
+S + K G A ++ M N +S ++I+GYV+ G + AR +FD MP R
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVR---AGDLVNARKVFDEMPDRKLT 57
Query: 197 SWTVMINGLVENGLYEEAWELFGRM------PQK-------------------------- 224
+W MI GL++ EE LF M P +
Sbjct: 58 TWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYT 117
Query: 225 -------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
++V ++++ + + GK+ + + + + R++ +WN +I G AQNG E L
Sbjct: 118 IKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVL 177
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
L+ M +G +P+ + FV++ ++C+ LA+ QG+Q +A IK G S ++V ++L++MY
Sbjct: 178 YLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMY 237
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA-VGVRPDGITF 396
SKCG + D+ AF + D V W+++I+A+ H +A F+ M + + + F
Sbjct: 238 SKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAF 297
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
L+LL C +G D+ + LF++MV YG P +HY C+VD++ RAG L +A IIR
Sbjct: 298 LNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 354
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 186/406 (45%), Gaps = 77/406 (18%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
++ +S+ G+ +A V+ +M K+ ++ N ++ Y +G ++R +FD MP + + +WN
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWN 60
Query: 104 AMVAGCVQNDMLDEAFNYFAAM------PER-------------NAASYNAMISGF-IKF 143
AM+AG +Q + +E + F M P+ + S I G+ IK+
Sbjct: 61 AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKY 120
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
G D + + +++ M +G K+++G + R+ MP RN V+W +I
Sbjct: 121 GLELD-------LVVNSSLAHMYMRNG--KLQDGEIVIRS------MPVRNLVAWNTLIM 165
Query: 204 GLVENGLYEEAWELFGRM------PQK----NVVASTA---------------------- 231
G +NG E L+ M P K V++S +
Sbjct: 166 GNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASS 225
Query: 232 -------MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+I+ + K G + +A F + D W+ MI+ Y +G+G+EA+ LF+ M
Sbjct: 226 VVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMA 285
Query: 285 -RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVNNALVTMYSKCGS 342
+T M+ +++ F++L AC+ L D+G + + +++ K+GF L +V + + G
Sbjct: 286 EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC 345
Query: 343 IVDSE-LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
+ +E + + DIV W T+++A H A+ F +++ +
Sbjct: 346 LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQI 391
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 172/330 (52%), Gaps = 13/330 (3%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVS--YTVMIDGYVKVKEGGGIARARALFDAMP 191
A+IS + K G + DA+++F+E P + +S Y +I GY + + A +F M
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK---VTDAAYMFRRMK 148
Query: 192 RRNEVSWTVMINGLVE-NGLYEEAW---ELFGRMPQKNVVASTAM----ITGFCKQGKVD 243
+V + GLV + E W L G+ + + + A+ IT + K G V+
Sbjct: 149 ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVE 208
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
LF ++ + + +WN +I+GY+QNG + L L+ QM +G+ PD VS+ ++CA
Sbjct: 209 AGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA 268
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNT 363
L G + LV +GF ++ V+NA ++MY++CG++ + F +VSW
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY 423
+I + H + FD MI G+RPDG F+ +LS C +G D+ + LF M +Y
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREY 388
Query: 424 GIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ P EHY+CLVD++ RAG+L A E I
Sbjct: 389 KLEPGPEHYSCLVDLLGRAGRLDEAMEFIE 418
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/380 (22%), Positives = 169/380 (44%), Gaps = 29/380 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMP--TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS 101
I+ + + G + AR+VF++ P ++ V +N++++ Y + + +F M V
Sbjct: 95 ISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSV 154
Query: 102 WNAMVAGCVQNDMLDEAF--------NYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
+ + G V + E + A N+ I+ ++K G + +RLF
Sbjct: 155 DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENG 209
EMP ++++ +I GY + G L++ M + + +++ G
Sbjct: 215 DEMPVKGLITWNAVISGY---SQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLG 271
Query: 210 LYEEAWELFGRMPQK-----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
+ E+ G++ + NV S A I+ + + G + +A +F + + + SW MI
Sbjct: 272 AKKIGHEV-GKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMI 330
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGF 323
Y +G GE L LF M++ G++PD +FV + +AC+ L D+G + + A+ ++
Sbjct: 331 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQT--SQPDIVSWNTIIAAFAQHVLYYKARSYF 381
+ + LV + + G + D + F ++ +PD W ++ A H A F
Sbjct: 391 EPGPEHYSCLVDLLGRAGRL-DEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449
Query: 382 DQMIAVGVRPDGITFLSLLS 401
++I P+ I + L+S
Sbjct: 450 AKVIE--FEPNNIGYYVLMS 467
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN+ + A E+++L+ M+R+G PD F + +CASL+L G+Q + V
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS--WNTIIAAFAQHVLYYKA 377
K G +++ V AL++MY KCG + D+ F + Q +S +N +I+ + + A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVC---------------CRAGKIDESMNLFNLMVHD 422
F +M GV D +T L L+ +C C G +D + + N +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 423 Y 423
Y
Sbjct: 201 Y 201
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V+ +N +I+ ++R GN+ AR VFD MP K +V+W +M+ Y G + LFD M
Sbjct: 291 NVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMI 350
Query: 96 MKNVVSWNA----MVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGRL 146
+ + A +++ C + + D+ F AM E Y+ ++ + GRL
Sbjct: 351 KRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRL 410
Query: 147 CDAQRLFKEMP 157
+A + MP
Sbjct: 411 DEAMEFIESMP 421
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 112/244 (45%), Gaps = 25/244 (10%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N I + + G++ A R++FD+MP K ++TWN++++ Y +G L++ M V
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 101 ----SWNAMVAGCVQ------NDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQ 150
+ ++++ C + + +P N NA IS + + G L A+
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVP--NVFVSNASISMYARCGNLAKAR 312
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLV 206
+F MP ++VS+T MI Y + G I LFD M +R + + ++++
Sbjct: 313 AVFDIMPVKSLVSWTAMIGCY-GMHGMGEI--GLMLFDDMIKRGIRPDGAVFVMVLSACS 369
Query: 207 ENGLYEEAWELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTLFQQIRCR-DIASW 260
+GL ++ ELF M ++ + + ++ + G++DEA + + D A W
Sbjct: 370 HSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 261 NIMI 264
++
Sbjct: 430 GALL 433
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 139/229 (60%), Gaps = 2/229 (0%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V ++++ + G+V+ A+ +F+++ R++ SW MI+G+AQ R + L L+S+M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
++ P+D F +L +AC L QGR + + G S L ++N+L++MY KCG +
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLK 273
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITFLSLLSVC 403
D+ F Q S D+VSWN++IA +AQH L +A F+ M+ G +PD IT+L +LS C
Sbjct: 274 DAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSC 333
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
AG + E FNLM ++G+ P HY+CLVD++ R G LQ A E+I
Sbjct: 334 RHAGLVKEGRKFFNLMA-EHGLKPELNHYSCLVDLLGRFGLLQEALELI 381
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 115/253 (45%), Gaps = 23/253 (9%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM- 125
DV +S++ Y SG +++ +F+ MP +NVVSW AM++G Q +D ++ M
Sbjct: 154 DVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMR 213
Query: 126 ---PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSY----TVMIDGYVKVKEGG 178
+ N ++ A++S G L + + + + SY +I Y K G
Sbjct: 214 KSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKC---G 270
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM----IT 234
+ A +FD ++ VSW MI G ++GL +A ELF M K+ A+ +
Sbjct: 271 DLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVL 330
Query: 235 GFCKQ-GKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
C+ G V E F + ++ ++ ++ + G +EAL L M M+
Sbjct: 331 SSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMP---MK 387
Query: 290 PDDLIFVSLFTAC 302
P+ +I+ SL +C
Sbjct: 388 PNSVIWGSLLFSC 400
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 80/178 (44%), Gaps = 17/178 (9%)
Query: 1 MLSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVF 60
+LS+ S AL S + H L H S N I+ + + G++ A ++F
Sbjct: 227 LLSACTGSGALGQGRSVHCQTLHMGLKSYLHIS-------NSLISMYCKCGDLKDAFRIF 279
Query: 61 DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-----NVVSWNAMVAGCVQNDML 115
D+ KDVV+WNSM+ Y G + LF+ M K + +++ +++ C ++
Sbjct: 280 DQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLV 339
Query: 116 DEAFNYFAAMPERNAA----SYNAMISGFIKFGRLCDAQRLFKEMPC-PNVVSYTVMI 168
E +F M E Y+ ++ +FG L +A L + MP PN V + ++
Sbjct: 340 KEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 1/172 (0%)
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
S + R G D S +C G + L +K GF SD+ + ++LV +Y
Sbjct: 109 SSVKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDS 168
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G + ++ F + + ++VSW +I+ FAQ + +M P+ TF +LL
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
S C +G + + ++ +H G+ L+ + + G L+ A I
Sbjct: 229 SACTGSGALGQGRSVHCQTLH-MGLKSYLHISNSLISMYCKCGDLKDAFRIF 279
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/416 (27%), Positives = 204/416 (49%), Gaps = 49/416 (11%)
Query: 84 PQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKF 143
P +R +FD M +++ VS+N M+ G ++ +M++E+ F ++ + S
Sbjct: 258 PTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRAC 317
Query: 144 GRLCD---AQRLFKEMPCPNVVSYT----VMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
G L D A+ ++ M V + ++ID Y K G + AR +F++M ++ V
Sbjct: 318 GHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKC---GDMITARDVFNSMECKDTV 374
Query: 197 SWTVMINGLVENGLYEEAWELF------------------------------GRMPQKNV 226
SW +I+G +++G EA +LF G+ N
Sbjct: 375 SWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNG 434
Query: 227 V---------ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
+ S A+I + K G+V ++ +F + D +WN +I+ + G L
Sbjct: 435 IKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGL 494
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
+ +QM ++ + PD F+ CASLA G++ + +++ G++S+L + NAL+ MY
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
SKCG + +S F + S+ D+V+W +I A+ + KA F M G+ PD + F+
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFI 614
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+++ C +G +DE + F M Y I P EHYAC+VD++SR+ ++ +A E I+
Sbjct: 615 AIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQ 670
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 198/452 (43%), Gaps = 49/452 (10%)
Query: 2 LSSIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFD 61
+SS +S AL + + LV + S D + L I +S ++ VF
Sbjct: 5 VSSPFISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKL-IDKYSHFREPASSLSVFR 63
Query: 62 KM-PTKDVVTWNSMLTAYWHSG-FPQ---------HSRALFDAMPMKNVVS-----WNAM 105
++ P K+V WNS++ A+ +G FP+ S+ D +V+ ++A
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 106 VAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYT 165
+ V +LD F E + NA++ + + G L A+++F EMP ++VS+
Sbjct: 124 MGDLVYEQILDMGF-------ESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWN 176
Query: 166 VMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL--------YEEAWEL 217
+I GY G A ++ + SW V + V + L ++ L
Sbjct: 177 SLISGY---SSHGYYEEALEIYHELKN----SWIVPDSFTVSSVLPAFGNLLVVKQGQGL 229
Query: 218 FG----RMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
G VV + ++ + K + +A +F ++ RD S+N MI GY +
Sbjct: 230 HGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV 289
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
EE++ +F + + +PD L S+ AC L L + Y ++K GF + +V N L
Sbjct: 290 EESVRMFLENLDQ-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNIL 348
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
+ +Y+KCG ++ + F D VSWN+II+ + Q +A F M+ + + D
Sbjct: 349 IDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADH 408
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
IT+L L+SV R + F +H GI
Sbjct: 409 ITYLMLISVSTRLADLK-----FGKGLHSNGI 435
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 146/326 (44%), Gaps = 47/326 (14%)
Query: 167 MIDGYVKVKEGGGIARARALFDAM-PRRNEVSWTVMINGLVENGLYEEAWELFGRM---- 221
+ID Y +E A + ++F + P +N W +I +NGL+ EA E +G++
Sbjct: 45 LIDKYSHFREP---ASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESK 101
Query: 222 --PQK---------------------------------NVVASTAMITGFCKQGKVDEAW 246
P K ++ A++ + + G + A
Sbjct: 102 VSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRAR 161
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
+F ++ RD+ SWN +I+GY+ +G EEAL ++ ++ + + PD S+ A +L
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLL 221
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
++ QG+ + +K G +S + VNN LV MY K D+ F + D VS+NT+I
Sbjct: 222 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMIC 281
Query: 367 AFAQ-HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+ + ++ R + + + +PD +T S+L C + + ++N M+ G
Sbjct: 282 GYLKLEMVEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLK-AGF 338
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEI 451
S L+DV ++ G + A ++
Sbjct: 339 VLESTVRNILIDVYAKCGDMITARDV 364
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 4/153 (2%)
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIV 359
A +S + L++ R+ +ALVI G DS + L+ YS S F + S ++
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM-NLFNL 418
WN+II AF+++ L+ +A ++ ++ V PD TF S++ C AG D M +L
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVYE 130
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ D G LVD+ SR G L RA ++
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 194/357 (54%), Gaps = 14/357 (3%)
Query: 110 VQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYT 165
+ +D++ A F +PE + S A+I F+K R +A + FK + C PN ++
Sbjct: 38 IDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFG 97
Query: 166 VMIDGYVKVKEG--GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ 223
+I ++ G AL + N + ++N V+ +A F
Sbjct: 98 TVIGSSTTSRDVKLGKQLHCYALKMGLAS-NVFVGSAVLNCYVKLSTLTDARRCFDDTRD 156
Query: 224 KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
NVV+ T +I+G+ K+ + +EA +LF+ + R + +WN +I G++Q GR EEA+N F M
Sbjct: 157 PNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDM 216
Query: 284 VRTGMQ-PDDLIFVSLFTACASLALLDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCG 341
+R G+ P++ F TA +++A G+ +A IK G ++ V N+L++ YSKCG
Sbjct: 217 LREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCG 276
Query: 342 SIVDSELAFG--QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA-VGVRPDGITFLS 398
++ DS LAF + Q +IVSWN++I +A + +A + F++M+ +RP+ +T L
Sbjct: 277 NMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILG 336
Query: 399 LLSVCCRAGKIDESMNLFNLMVHDYGIPP--RSEHYACLVDVMSRAGQLQRACEIIR 453
+L C AG I E FN V+DY P EHYAC+VD++SR+G+ + A E+I+
Sbjct: 337 VLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIK 393
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 157/384 (40%), Gaps = 90/384 (23%)
Query: 75 LTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM------PER 128
L + S +++ +FD +P +V+S A++ V+ EA F + P
Sbjct: 34 LVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNE 93
Query: 129 ---------------------------------NAASYNAMISGFIKFGRLCDAQRLFKE 155
N +A+++ ++K L DA+R F +
Sbjct: 94 FTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDD 153
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
PNVVS T +I GY+K E A +LF AMP R+ V+W +I G + G EEA
Sbjct: 154 TRDPNVVSITNLISGYLKKHE---FEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAV 210
Query: 216 ELFGRMPQKNVV---------ASTA--------------------------------MIT 234
F M ++ VV A TA +I+
Sbjct: 211 NTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLIS 270
Query: 235 GFCKQGKVDEAWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TGMQPD 291
+ K G ++++ F ++ R+I SWN MI GYA NGRGEEA+ +F +MV+ T ++P+
Sbjct: 271 FYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPN 330
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDS---DLSVNNALVTMYSKCGSIVDS-E 347
++ + + AC L+ +G + + D +L +V M S+ G ++ E
Sbjct: 331 NVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEE 390
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQH 371
L P I W ++ H
Sbjct: 391 LIKSMPLDPGIGFWKALLGGCQIH 414
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 120/275 (43%), Gaps = 33/275 (12%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V+ + + + + +T AR+ FD +VV+ ++++ Y + + +LF AMP
Sbjct: 127 NVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMP 186
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMIS--------GFIK 142
++VV+WNA++ G Q +EA N F M N +++ I+ G K
Sbjct: 187 ERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGK 246
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM--PRRNEVSWTV 200
C + L K NV + +I Y K G + + F+ + +RN VSW
Sbjct: 247 SIHACAIKFLGKRF---NVFVWNSLISFYSKC---GNMEDSLLAFNKLEEEQRNIVSWNS 300
Query: 201 MINGLVENGLYEEAWELFGRMPQK-NVVASTAMITGF---CKQ-GKVDEAWTLFQQI--- 252
MI G NG EEA +F +M + N+ + I G C G + E + F +
Sbjct: 301 MIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVND 360
Query: 253 ----RCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
++ + M+ +++GR +EA L M
Sbjct: 361 YDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPT--KDVVTWNSMLTAYWHSGFPQHSRALFD 92
++V+ N I+ +S+ GN+ + F+K+ +++V+WNSM+ Y H+G + + A+F+
Sbjct: 260 FNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFE 319
Query: 93 AMPMK-----NVVSWNAMVAGCVQNDMLDEAFNYF-AAMPERNAAS------YNAMISGF 140
M N V+ ++ C ++ E + YF A+ + + + Y M+
Sbjct: 320 KMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLELEHYACMVDML 379
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSW 198
+ GR +A+ L K MP + + + G ++ +A+ A + + PR +VS
Sbjct: 380 SRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILELDPR--DVSS 437
Query: 199 TVMIN 203
VM++
Sbjct: 438 YVMLS 442
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 145/243 (59%), Gaps = 4/243 (1%)
Query: 214 AWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
A +LF M ++NVV+ TAM++G+ + G + A LF+ + RD+ SWN ++ QNG
Sbjct: 181 ARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLF 240
Query: 274 EEALNLFSQMV-RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
EA++LF +M+ ++P+++ V + +ACA L + +A + SD+ V+N+
Sbjct: 241 LEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNS 300
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV--- 389
LV +Y KCG++ ++ F S+ + +WN++I FA H +A + F++M+ + +
Sbjct: 301 LVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDI 360
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
+PD ITF+ LL+ C G + + F+LM + +GI PR EHY CL+D++ RAG+ A
Sbjct: 361 KPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEAL 420
Query: 450 EII 452
E++
Sbjct: 421 EVM 423
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 168/387 (43%), Gaps = 74/387 (19%)
Query: 49 RAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD--------AMPMKNVV 100
R N++ AR +FD+ + + ++LTAY S P H+ + F ++P N
Sbjct: 69 RLCNLSYARFIFDRFSFPNTHLYAAVLTAY-SSSLPLHASSAFSFFRLMVNRSVPRPNHF 127
Query: 101 SW-----------NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA 149
+ +A V + F+ + + SY + +S + A
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVS------HITLA 181
Query: 150 QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENG 209
++LF EM NVVS+T M+ GY + G I+ A ALF+ MP R+ SW ++ +NG
Sbjct: 182 RQLFDEMSERNVVSWTAMLSGYAR---SGDISNAVALFEDMPERDVPSWNAILAACTQNG 238
Query: 210 LYEEAWELFGRM-------PQK---------------------------------NVVAS 229
L+ EA LF RM P + +V S
Sbjct: 239 LFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVS 298
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR---T 286
+++ + K G ++EA ++F+ + + +WN MI +A +GR EEA+ +F +M++
Sbjct: 299 NSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIN 358
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVNNALVTMYSKCGSIVD 345
++PD + F+ L AC L+ +GR + L+ + G + + L+ + + G +
Sbjct: 359 DIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDE 418
Query: 346 S-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ E+ + D W +++ A H
Sbjct: 419 ALEVMSTMKMKADEAIWGSLLNACKIH 445
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 151/331 (45%), Gaps = 36/331 (10%)
Query: 6 IVSIALKPTP------SSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQV 59
I + LK TP S+ HTH +F F Y V + L + S +IT ARQ+
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTH---LFKSGFHLYVVVQTALLHSYASSVSHITLARQL 184
Query: 60 FDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAF 119
FD+M ++VV+W +ML+ Y SG ++ ALF+ MP ++V SWNA++A C QN + EA
Sbjct: 185 FDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAV 244
Query: 120 NYFAAMPER-----NAASYNAMISGFIKFGRLCDAQRL----FKEMPCPNVVSYTVMIDG 170
+ F M N + ++S + G L A+ + ++ +V ++D
Sbjct: 245 SLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDL 304
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV---- 226
Y K G + A ++F +++ +W MIN +G EEA +F M + N+
Sbjct: 305 YGKC---GNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIK 361
Query: 227 ---VASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALN 278
+ ++ G V + F + R I + +I + GR +EAL
Sbjct: 362 PDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALE 421
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
+ S M M+ D+ I+ SL AC LD
Sbjct: 422 VMSTM---KMKADEAIWGSLLNACKIHGHLD 449
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 118/428 (27%), Positives = 209/428 (48%), Gaps = 52/428 (12%)
Query: 69 VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER 128
++ + ++ A G ++R +FD M +++V+WN+++A +++ EA + M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 129 NAASYNAMISGFIK-FGRLC---DAQR-----LFKEMPCPNVVSYTVMIDGYVKVKEGGG 179
N +S K F L +AQR + + NV + ++D YVK G
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKF---GK 216
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------PQKNVVAS---- 229
A+ + D + ++ V T +I G + G EA + F M P + AS
Sbjct: 217 TREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 276
Query: 230 -----------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
T+++T + + VD++ +F+ I + SW
Sbjct: 277 CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSW 336
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+I+G QNGR E AL F +M+R ++P+ S C++LA+ ++GRQ + +V K
Sbjct: 337 TSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTK 396
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
+GFD D + L+ +Y KCG + L F S+ D++S NT+I ++AQ+ +A
Sbjct: 397 YGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
F++MI +G++P+ +T LS+L C + ++E LF+ D I ++HYAC+VD++
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLG 515
Query: 441 RAGQLQRA 448
RAG+L+ A
Sbjct: 516 RAGRLEEA 523
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 177/370 (47%), Gaps = 22/370 (5%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
A+ +H L V +V+ + + + + G A+ V D++ KDVV +++ Y
Sbjct: 184 AQRSHGLAVILG-LEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGY 242
Query: 79 WHSGFPQHSRALFDAMPMKNV----VSWNAMVAGC-----VQNDMLDEAFNYFAAMPERN 129
G + F +M ++ V ++ +++ C + N L + E
Sbjct: 243 SQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF-ESA 301
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV-KEGGGIARARALFD 188
AS ++++ +++ + D+ R+FK + PN VS+T +I G V+ +E + R +
Sbjct: 302 LASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR 361
Query: 189 AMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDE 244
+ N + + + G ++EE ++ G + + ++ A + +I + K G D
Sbjct: 362 DSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
A +F + D+ S N MI YAQNG G EAL+LF +M+ G+QP+D+ +S+ AC +
Sbjct: 422 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNN 481
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNN---ALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
L+++G + + K D + N+ +V + + G + ++E+ + PD+V W
Sbjct: 482 SRLVEEGCELFDSFRK---DKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLW 538
Query: 362 NTIIAAFAQH 371
T+++A H
Sbjct: 539 RTLLSACKVH 548
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 199/443 (44%), Gaps = 60/443 (13%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS---------- 101
N++ AR VF+ + V WNSM+ Y +S P + + M K
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLK 115
Query: 102 -----WNAMVAGCVQNDMLDEAF--------------------NY----FAAMPERNAAS 132
+ CV ++ F NY F +P+ N +
Sbjct: 116 ACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVA 175
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNV-VSYTVMIDGYVKVKEGGGIARARALFDAMP 191
+ ++ISGF+ R DA F+EM V + T+M+D L A
Sbjct: 176 WGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVD----------------LLVACG 219
Query: 192 RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
R ++ +G ++ GL + + F NV+ +T++I + K G + A LF
Sbjct: 220 RCKDIVTGKWFHGFLQ-GLGFDPY--FQSKVGFNVILATSLIDMYAKCGDLRTARYLFDG 276
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ R + SWN +ITGY+QNG EEAL +F M+ G+ PD + F+S+ A G
Sbjct: 277 MPERTLVSWNSIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLG 336
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
+ +A V K GF D ++ ALV MY+K G ++ AF + D ++W +I A H
Sbjct: 337 QSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASH 396
Query: 372 VLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSE 430
+A S F +M G PDGIT+L +L C G ++E F M +G+ P E
Sbjct: 397 GHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVE 456
Query: 431 HYACLVDVMSRAGQLQRACEIIR 453
HY C+VD++SRAG+ + A +++
Sbjct: 457 HYGCMVDILSRAGRFEEAERLVK 479
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 152/351 (43%), Gaps = 73/351 (20%)
Query: 26 LVFAKHFSS---YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG 82
L F +F S ++V A I +++ G++ AR +FD MP + +V+WNS++T Y +G
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 83 FPQHSRALF----------DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE--RNA 130
+ + +F D + +V+ +M+ GC Q L ++ + + + ++A
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIR-ASMIQGCSQ---LGQSIHAYVSKTGFVKDA 352
Query: 131 ASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM 190
A A+++ + K G A++ F+++
Sbjct: 353 AIVCALVNMYAKTGDAESAKKAFEDL---------------------------------- 378
Query: 191 PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK-----NVVASTAMITGFCKQGKVDEA 245
+++ ++WTV+I GL +G EA +F RM +K + + ++ G V+E
Sbjct: 379 EKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEG 438
Query: 246 WTLFQQIRCRD-----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
F ++R + + M+ ++ GR EEA L M ++P+ I+ +L
Sbjct: 439 QRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM---PVKPNVNIWGALLN 495
Query: 301 AC---ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
C +L L D+ R A + G S + V L +Y+K G D +L
Sbjct: 496 GCDIHENLELTDRIRSMVAEPEELG--SGIYV--LLSNIYAKAGRWADVKL 542
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 158/309 (51%), Gaps = 38/309 (12%)
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS------------- 229
A +F MP R+ VSWT +I G GLY+EA + F +M + +A+
Sbjct: 160 ACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGC 219
Query: 230 -----------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
A+I + K ++ +A +F ++ +D SWN MI+G
Sbjct: 220 LSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISG 279
Query: 267 YAQNGRGEEALNLFSQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
R +EA++LFS M +G++PD I S+ +ACASL +D GR + ++ G
Sbjct: 280 LVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKW 339
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI 385
D + A+V MY+KCG I + F ++ +WN ++ A H ++ YF++M+
Sbjct: 340 DTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMV 399
Query: 386 AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM-VHDYGIPPRSEHYACLVDVMSRAGQ 444
+G +P+ +TFL+ L+ CC G +DE F+ M +Y + P+ EHY C++D++ RAG
Sbjct: 400 KLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGL 459
Query: 445 LQRACEIIR 453
L A E+++
Sbjct: 460 LDEALELVK 468
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 165/350 (47%), Gaps = 22/350 (6%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D+Y N + + G A +VF +MP +DVV+W ++T + +G + + F M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD 199
Query: 96 MK-NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQ 150
++ N+ ++ ++ + L + +R + + NA+I ++K +L DA
Sbjct: 200 VEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAM 259
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMIN-- 203
R+F E+ + VS+ MI G V + A LF M + + T +++
Sbjct: 260 RVFGELEKKDKVSWNSMISGLVHCERS---KEAIDLFSLMQTSSGIKPDGHILTSVLSAC 316
Query: 204 ---GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
G V++G + + L + + TA++ + K G ++ A +F IR +++ +W
Sbjct: 317 ASLGAVDHGRWVHEYILTAGIKWDTHIG-TAIVDMYAKCGYIETALEIFNGIRSKNVFTW 375
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
N ++ G A +G G E+L F +MV+ G +P+ + F++ AC L+D+GR+ + +
Sbjct: 376 NALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKS 435
Query: 321 HGFD--SDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAA 367
++ L ++ + + G + ++ EL +PD+ I++A
Sbjct: 436 REYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSA 485
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 89/193 (46%), Gaps = 4/193 (2%)
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
S+N +++ YA + + + V G PD F +F AC + + +G+Q + +V
Sbjct: 73 SYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIV 132
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
K GF D+ V N+LV Y CG ++ FG+ D+VSW II F + LY +A
Sbjct: 133 TKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEAL 192
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F +M V P+ T++ +L R G + + L++ + A L+D+
Sbjct: 193 DTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA-LIDM 248
Query: 439 MSRAGQLQRACEI 451
+ QL A +
Sbjct: 249 YVKCEQLSDAMRV 261
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+D + + +++ G I A ++F+ + +K+V TWN++L G S F+ M
Sbjct: 339 WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEM 398
Query: 95 P----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER------NAASYNAMISGFIKFG 144
N+V++ A + C ++DE YF M R Y MI + G
Sbjct: 399 VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAG 458
Query: 145 RLCDAQRLFKEMPC-PNV 161
L +A L K MP P+V
Sbjct: 459 LLDEALELVKAMPVKPDV 476
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 111/341 (32%), Positives = 181/341 (53%), Gaps = 42/341 (12%)
Query: 118 AFNYFAAMPERNAA--SYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGY 171
A F M +R+++ ++N++ISG+ + G+ DA L+ +M P+ ++ ++
Sbjct: 146 AHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVL--- 202
Query: 172 VKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTA 231
K GGI +V I + L +E FG +V A
Sbjct: 203 ---KACGGIG-----------------SVQIGEAIHRDLVKEG---FGY----DVYVLNA 235
Query: 232 MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
++ + K G + +A +F I +D SWN M+TGY +G EAL++F MV+ G++PD
Sbjct: 236 LVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPD 295
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
V++ + A + GRQ + VI+ G + +LSV NAL+ +YSK G + + F
Sbjct: 296 K---VAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFD 352
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
Q + D VSWN II+A +++ YF+QM +PDGITF+S+LS+C G +++
Sbjct: 353 QMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVED 409
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
LF+LM +YGI P+ EHYAC+V++ RAG ++ A +I
Sbjct: 410 GERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMI 450
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 117/231 (50%), Gaps = 6/231 (2%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA--SWNIMITGYAQNGRGEEALNLF 280
+ N+ S+ ++ + G + A +F ++ RD + +WN +I+GYA+ G+ E+A+ L+
Sbjct: 124 RNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY 183
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
QM G++PD F + AC + + G + ++K GF D+ V NALV MY+KC
Sbjct: 184 FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKC 243
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G IV + F D VSWN+++ + H L ++A F M+ G+ PD + ++
Sbjct: 244 GDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKV---AIS 300
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
SV R L ++ G+ L+ + S+ GQL +AC I
Sbjct: 301 SVLARVLSFKHGRQLHGWVIRR-GMEWELSVANALIVLYSKRGQLGQACFI 350
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 156/331 (47%), Gaps = 41/331 (12%)
Query: 39 RANLNIAA-----FSRAGNITAARQVFDKMPTKDV--VTWNSMLTAYWHSGFPQHSRALF 91
R NL I++ ++ G A +VFD+M +D WNS+++ Y G + + AL+
Sbjct: 124 RNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALY 183
Query: 92 DAMPMKNV----VSWNAMVAGC-----------VQNDMLDEAFNYFAAMPERNAASYNAM 136
M V ++ ++ C + D++ E F Y + NA+
Sbjct: 184 FQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGY-------DVYVLNAL 236
Query: 137 ISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
+ + K G + A+ +F +P + VS+ M+ GY+ G + A +F M +
Sbjct: 237 VVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL---HHGLLHEALDIFRLMVQNGIE 293
Query: 197 SWTVMINGLVENGL-YEEAWELFG----RMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ 251
V I+ ++ L ++ +L G R + + + A+I + K+G++ +A +F Q
Sbjct: 294 PDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQ 353
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
+ RD SWN +I+ +++N G L F QM R +PD + FVS+ + CA+ +++ G
Sbjct: 354 MLERDTVSWNAIISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDG 410
Query: 312 RQTYALVIK-HGFDSDLSVNNALVTMYSKCG 341
+ ++L+ K +G D + +V +Y + G
Sbjct: 411 ERLFSLMSKEYGIDPKMEHYACMVNLYGRAG 441
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 108/230 (46%), Gaps = 18/230 (7%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
YDVY N + +++ G+I AR VFD +P KD V+WNSMLT Y H G + +F M
Sbjct: 228 YDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLM 287
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP--------ERNAASYNAMISGFIKFGRL 146
++N + + + V +L +F + + E + NA+I + K G+L
Sbjct: 288 -VQNGIEPDKVAISSVLARVL--SFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQL 344
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
A +F +M + VS+ +I + K G+ + A + + +++ +++
Sbjct: 345 GQACFIFDQMLERDTVSWNAIISAH--SKNSNGLKYFEQMHRANAKPDGITFVSVLSLCA 402
Query: 207 ENGLYEEAWELFGRMPQK-----NVVASTAMITGFCKQGKVDEAWTLFQQ 251
G+ E+ LF M ++ + M+ + + G ++EA+++ Q
Sbjct: 403 NTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQ 452
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 2/118 (1%)
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
IF SL C SL +D G + + L+ + ++L +++ LV +Y+ CG + F +
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 354 SQPDI--VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
S+ D +WN++I+ +A+ Y A + + QM GV+PD TF +L C G +
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSV 211
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 133/544 (24%), Positives = 232/544 (42%), Gaps = 120/544 (22%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H L K YD N ++ + + G++ AR+VFD MP +++V++ S++T Y
Sbjct: 90 HDHILNSNCK----YDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQ 145
Query: 81 SGFPQHSRALFDAMPMKNVV---------------------------------------S 101
+G + L+ M +++V +
Sbjct: 146 NGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIA 205
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM----- 156
NA++A V+ + + +A F +P ++ S++++I+GF + G +A KEM
Sbjct: 206 QNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGV 265
Query: 157 -------------PCPNVV--SYTVMIDGYVKVKE--GGGIA---------------RAR 184
C +++ Y I G E G IA AR
Sbjct: 266 FHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSAR 325
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA-STAMITGFCKQGK-- 241
+FD + R + SW V+I GL NG +EA +F +M + + ++ + C Q K
Sbjct: 326 RVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPM 385
Query: 242 ------------------------------------VDEAWTLFQQIRCR-DIASWNIMI 264
+ + LF+ R D SWN ++
Sbjct: 386 ALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTIL 445
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
T Q+ + E L LF M+ + +PD + +L C ++ L G Q + +K G
Sbjct: 446 TACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLA 505
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+ + N L+ MY+KCGS+ + F D+VSW+T+I +AQ +A F +M
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEM 565
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
+ G+ P+ +TF+ +L+ C G ++E + L+ M ++GI P EH +C+VD+++RAG+
Sbjct: 566 KSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGR 625
Query: 445 LQRA 448
L A
Sbjct: 626 LNEA 629
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 168/367 (45%), Gaps = 76/367 (20%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF----------DAMPM 96
++R G + +AR+VFD++ D +WN ++ ++G+ + ++F DA+ +
Sbjct: 315 YARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISL 374
Query: 97 KN--------------------VVSWNAMVAGCVQNDMLDE---------AFNYFAAMPE 127
++ ++ W + V N +L FN F
Sbjct: 375 RSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN 434
Query: 128 R-NAASYNAMISGFIKFGRLCDAQRLFKEM---PC-PNVVSYTVMIDGYVKVKEGGGIAR 182
++ S+N +++ ++ + + RLFK M C P+ ++ ++ G V++
Sbjct: 435 NADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEIS------- 487
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKV 242
++ ++V + GL P++ + +I + K G +
Sbjct: 488 ------SLKLGSQVHCYSLKTGLA---------------PEQFI--KNGLIDMYAKCGSL 524
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+A +F + RD+ SW+ +I GYAQ+G GEEAL LF +M G++P+ + FV + TAC
Sbjct: 525 GQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTAC 584
Query: 303 ASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVS 360
+ + L+++G + YA + +HG + +V + ++ G + ++E + +PD+V
Sbjct: 585 SHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVV 644
Query: 361 WNTIIAA 367
W T+++A
Sbjct: 645 WKTLLSA 651
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NV 99
I +++ G++ AR++FD M +DVV+W++++ Y SGF + + LF M N
Sbjct: 515 IDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNH 574
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFGRLCDAQRLFK 154
V++ ++ C +++E +A M + S + ++ + GRL +A+R
Sbjct: 575 VTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFID 634
Query: 155 EMPC-PNVVSYTVMI 168
EM P+VV + ++
Sbjct: 635 EMKLEPDVVVWKTLL 649
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 62/115 (53%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
++SL AC+S L QGR+ + ++ D +NN +++MY KCGS+ D+ F
Sbjct: 70 YISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMP 129
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
+ ++VS+ ++I ++Q+ +A + +M+ + PD F S++ C + +
Sbjct: 130 ERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 178 bits (452), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 130/469 (27%), Positives = 206/469 (43%), Gaps = 83/469 (17%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +V AN I +++ GNI ARQVFD MP ++VV+W +++T Y +G Q LF
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLF-- 150
Query: 94 MPMKNVVSWNAMVAGCVQNDM-LDEAFNYFAAMPERNAASYNAMISGF-IKFGRLCDAQR 151
++M++ C N+ L P + + G +K G C
Sbjct: 151 ---------SSMLSHCFPNEFTLSSVLTSCRYEPGKQ-------VHGLALKLGLHC---- 190
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
++ +I Y + +G A +F+A+ +N V+W MI L
Sbjct: 191 --------SIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLG 242
Query: 212 EEAWELFGRMPQKNVVASTAMITGFC--------------------------KQGKVDEA 245
++A +F RM V A + C K G V +
Sbjct: 243 KKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQT 302
Query: 246 --------------------WTLFQQI-RCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+ LF ++ CRDI +WN +IT +A E A++LF Q+
Sbjct: 303 EVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLR 361
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+ + PD F S+ ACA L +A VIK GF +D +NN+L+ Y+KCGS+
Sbjct: 362 QEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLD 421
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
F D+VSWN+++ A++ H F +M + PD TF++LLS C
Sbjct: 422 LCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACS 478
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
AG+++E + +F M P+ HYAC++D++SRA + A E+I+
Sbjct: 479 HAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 123/461 (26%), Positives = 211/461 (45%), Gaps = 56/461 (12%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ + + ++ AR+VFD++ V+WN ++ Y GF + +F M NV N
Sbjct: 204 VDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLN 263
Query: 104 AMVA----GCVQNDMLDEAFNYFAAMPERNAASYNAMISG-----FIKFGRLCDAQRLFK 154
V+ C ++ L E A+ + + + ++S ++K RL A+R+F
Sbjct: 264 HTVSSVMLACSRSLAL-EVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFD 322
Query: 155 EMPCPNVVSYTVMIDGYVKVKEGGGIAR-ARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
+ ++ S+T + GY G+ R AR LFD MP RN VSW M+ G V ++E
Sbjct: 323 QTRSKDLKSWTSAMSGYAM----SGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDE 378
Query: 214 AWELFGRMPQK---------------------------------------NVVASTAMIT 234
A + M Q+ NV+ + A++
Sbjct: 379 ALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLD 438
Query: 235 GFCKQGKVDEAWTLFQQI-RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ K G + A F+Q+ RD SWN ++TG A+ GR E+AL+ F M + +P
Sbjct: 439 MYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPSKY 497
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+L CA++ L+ G+ + +I+ G+ D+ + A+V MYSKC + F +
Sbjct: 498 TLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA 557
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
+ D++ WN+II ++ + F + GV+PD +TFL +L C R G ++
Sbjct: 558 ATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGF 617
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
F+ M Y I P+ EHY C++++ + G L + E + L
Sbjct: 618 QYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLL 658
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/484 (23%), Positives = 203/484 (41%), Gaps = 88/484 (18%)
Query: 53 ITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAG 108
+ AR+V + P + N + AY G +R LF+ MP ++ SWNA++
Sbjct: 77 VVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITA 136
Query: 109 CVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP--------N 160
C QN + DE F F M + +G +K L RL +++ C N
Sbjct: 137 CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN 196
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGR 220
V T ++D Y K + ++ AR +FD + ++VSW V++ +E G +EA +F +
Sbjct: 197 VDLETSIVDVYGKCRV---MSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFK 253
Query: 221 MPQKNV---------------------------------------VASTAMITGFCKQGK 241
M + NV V ST++ + K +
Sbjct: 254 MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDR 313
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM------------- 288
++ A +F Q R +D+ SW ++GYA +G EA LF M +
Sbjct: 314 LESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHA 373
Query: 289 ------------------QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
D++ V + C+ ++ + G+Q + + +HG+D+++ V
Sbjct: 374 HEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVA 433
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQ-PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
NAL+ MY KCG++ + + F Q S+ D VSWN ++ A+ +A S+F+ M V
Sbjct: 434 NALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEA 492
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
+P T +LL+ C ++ + ++ D G +VD+ S+ A
Sbjct: 493 KPSKYTLATLLAGCANIPALNLGKAIHGFLIRD-GYKIDVVIRGAMVDMYSKCRCFDYAI 551
Query: 450 EIIR 453
E+ +
Sbjct: 552 EVFK 555
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 199/390 (51%), Gaps = 15/390 (3%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER--- 128
NS+L Y + + +F MP NVVSWN M+ G Q D++ + M +
Sbjct: 288 NSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQ 347
Query: 129 -NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE-GGGIARARAL 186
N + +++ + G + +R+F +P P+V ++ M+ GY + I+ R +
Sbjct: 348 PNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQM 407
Query: 187 FDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF------CKQG 240
+ ++ + +V+++ E ++ G + + + ++ +++G C++
Sbjct: 408 QFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKM 467
Query: 241 KVDEAWTLFQQ-IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSL 298
++ E +F I DIA WN MI+G+ N +AL LF +M +T + P++ F ++
Sbjct: 468 EISEC--IFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATV 525
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
++C+ L L GRQ + LV+K G+ SD V AL MY KCG I + F + +
Sbjct: 526 LSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNT 585
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
V WN +I + + +A + +MI+ G +PDGITF+S+L+ C +G ++ + + +
Sbjct: 586 VIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSS 645
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
M +GI P +HY C+VD + RAG+L+ A
Sbjct: 646 MQRIHGIEPELDHYICIVDCLGRAGRLEDA 675
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 129/544 (23%), Positives = 216/544 (39%), Gaps = 141/544 (25%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D Y N + + G+ AR+VFD+M +DV +WN+ LT G + +FD MP
Sbjct: 40 DTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMP 99
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAM------PER--------------------- 128
++VVSWN M++ V+ ++A + M P R
Sbjct: 100 ERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMR 159
Query: 129 ------------NAASYNAMISGFIKFGRLCD-AQRLFKEMPCPNVVSYTVMIDGYVKVK 175
N NA++S + K G + D R+F+ + PN VSYT +I
Sbjct: 160 CHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVI------- 212
Query: 176 EGGGIARARALFDAM--------------------------PRR----------NEVSWT 199
GG+AR + +A+ PR NE+
Sbjct: 213 --GGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQ 270
Query: 200 V--------------MINGLVE----NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
+ + N L+E N A +F MP+ NVV+ MI GF ++ +
Sbjct: 271 IHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYR 330
Query: 242 VDEAWTLFQQIR----------C-------------------------RDIASWNIMITG 266
D++ ++R C +++WN M++G
Sbjct: 331 SDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSG 390
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
Y+ EEA++ F QM ++PD + ++CA L L+ G+Q + +VI+ +
Sbjct: 391 YSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKN 450
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQT-SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI 385
+ + L+ +YS+C + SE F ++ DI WN++I+ F ++L KA F +M
Sbjct: 451 SHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMH 510
Query: 386 AVGVR-PDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
V P+ +F ++LS C R + L+V G S L D+ + G+
Sbjct: 511 QTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKS-GYVSDSFVETALTDMYCKCGE 569
Query: 445 LQRA 448
+ A
Sbjct: 570 IDSA 573
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 190/409 (46%), Gaps = 49/409 (11%)
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM-PERNAASYNAMISGFIKFGRLCDA 149
F + P V+ ++ N L EA A + PE Y+A+++ + L D
Sbjct: 12 FSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDG 71
Query: 150 QRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL 205
QR+ M P T ++ Y K + AR + D MP +N VSWT MI+
Sbjct: 72 QRVHAHMIKTRYLPATYLRTRLLIFYGKCD---CLEDARKVLDEMPEKNVVSWTAMISRY 128
Query: 206 VENGLYEEAWELFGRMPQKN---------------------------------------V 226
+ G EA +F M + + +
Sbjct: 129 SQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHI 188
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
++++ + K G++ EA +F+ + RD+ S +I GYAQ G EEAL +F ++
Sbjct: 189 FVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSE 248
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
GM P+ + + SL TA + LALLD G+Q + V++ + N+L+ MYSKCG++ +
Sbjct: 249 GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYA 308
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITFLSLLSVCCR 405
F + +SWN ++ +++H L + F M V+PD +T L++LS C
Sbjct: 309 RRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 406 AGKIDESMNLFNLMV-HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
D +N+F+ MV +YG P +EHY C+VD++ RAG++ A E I+
Sbjct: 369 GRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 132/339 (38%), Gaps = 79/339 (23%)
Query: 113 DMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMI 168
D L++A MPE+N S+ AMIS + + G +A +F EM PN ++ ++
Sbjct: 101 DCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVL 160
Query: 169 DGYVKVK--------------------------------EGGGIARARALFDAMPRRNEV 196
++ + G I AR +F+ +P R+ V
Sbjct: 161 TSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVV 220
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNV------------------------------ 226
S T +I G + GL EEA E+F R+ + +
Sbjct: 221 SCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHV 280
Query: 227 ---------VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
V ++I + K G + A LF + R SWN M+ GY+++G G E L
Sbjct: 281 LRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVL 340
Query: 278 NLFSQMV-RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI--KHGFDSDLSVNNALV 334
LF M ++PD + +++ + C+ + D G + ++ ++G +V
Sbjct: 341 ELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIV 400
Query: 335 TMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHV 372
M + G I ++ E S+P +++ A H+
Sbjct: 401 DMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHL 439
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 129/345 (37%), Gaps = 95/345 (27%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKN-------- 98
+ + + AR+V D+MP K+VV+W +M++ Y +G + +F M +
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTF 156
Query: 99 ----------------------VVSWNAMVAGCVQNDMLD---------EAFNYFAAMPE 127
+V WN V + +LD EA F +PE
Sbjct: 157 ATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPE 216
Query: 128 RNAASYNAMISGFIKFGRLCDA----QRLFKEMPCPNVVSY------------------- 164
R+ S A+I+G+ + G +A RL E PN V+Y
Sbjct: 217 RDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQA 276
Query: 165 ----------------TVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
+ID Y K G ++ AR LFD MP R +SW M+ G ++
Sbjct: 277 HCHVLRRELPFYAVLQNSLIDMYSKC---GNLSYARRLFDNMPERTAISWNAMLVGYSKH 333
Query: 209 GLYEEAWELFGRMPQKNVVASTAM----ITGFCKQGKV-DEAWTLFQQIRCRDIAS---- 259
GL E ELF M + V A+ + C G++ D +F + + +
Sbjct: 334 GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGT 393
Query: 260 --WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ ++ + GR +EA +M +P + SL AC
Sbjct: 394 EHYGCIVDMLGRAGRIDEAFEFIKRMPS---KPTAGVLGSLLGAC 435
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 18/220 (8%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H H V + Y V + +L I +S+ GN++ AR++FD MP + ++WN+ML Y
Sbjct: 277 HCH---VLRRELPFYAVLQNSL-IDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 81 SGFPQHSRALFDAMPMK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAM------PERN 129
G + LF M + + V+ A+++GC M D N F M +
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPG 392
Query: 130 AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA--RALF 187
Y ++ + GR+ +A K MP + G +V I + R L
Sbjct: 393 TEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLI 452
Query: 188 DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
+ P N ++ ++ N G + + + M QK V
Sbjct: 453 EIEP-ENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVT 491
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 119/296 (40%), Gaps = 51/296 (17%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSW 102
+++AG I AR++F+ +P +DVV+ +++ Y G + + +F + + N V++
Sbjct: 198 YAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTY 257
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASY----NAMISGFIKFGRLCDAQRLFKEMPC 158
+++ +LD + R Y N++I + K G L A+RLF MP
Sbjct: 258 ASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPE 317
Query: 159 PNVVSYTVMIDGYVKVKEG---------------------------GGIARARA------ 185
+S+ M+ GY K G G + R
Sbjct: 318 RTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLN 377
Query: 186 LFDAM------PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCK- 238
+FD M + + +++ L G +EA+E RMP K + G C+
Sbjct: 378 IFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRV 437
Query: 239 QGKVDEAWTLFQ---QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
VD ++ + +I + ++ I+ YA GR + N+ + M++ + +
Sbjct: 438 HLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKE 493
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 208/474 (43%), Gaps = 84/474 (17%)
Query: 45 AAFSRAGNITAAR--QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSW 102
A+ R G + AR + D P + N ++ Y P+ +R + P +NVVSW
Sbjct: 19 ASSMRLGRVVHARIVKTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLTPARNVVSW 76
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPE--------------RNAASYNAMISG------FIK 142
++++G QN A F M + AS ++G +K
Sbjct: 77 TSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVK 136
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMI 202
GR+ D V D Y K + AR LFD +P RN +W I
Sbjct: 137 CGRILD------------VFVGCSAFDMYCKTRLRDD---ARKLFDEIPERNLETWNAFI 181
Query: 203 NGLVENGLYEEAWELFGR-----------------------------MPQKNVVASTAMI 233
+ V +G EA E F M +V +
Sbjct: 182 SNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFD 241
Query: 234 T------------GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
T G CKQ + E +F ++ ++ SW ++ Y QN E+A L+
Sbjct: 242 TDVSVCNGLIDFYGKCKQIRSSE--IIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+ + ++ D + S+ +ACA +A L+ GR +A +K + + V +ALV MY KCG
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI--AVGVRPDGITFLSL 399
I DSE AF + + ++V+ N++I +A A + F++M G P+ +TF+SL
Sbjct: 360 CIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 419
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
LS C RAG ++ M +F+ M YGI P +EHY+C+VD++ RAG ++RA E I+
Sbjct: 420 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIK 473
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 55/294 (18%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEM---PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM 190
NA+ + ++ GR+ A R+ K + P P + +Y +I+ Y K+ AR +
Sbjct: 15 NAISASSMRLGRVVHA-RIVKTLDSPPPPFLANY--LINMYSKLDHP---ESARLVLRLT 68
Query: 191 PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV-------------ASTAM-ITG- 235
P RN VSWT +I+GL +NG + A F M ++ VV AS + +TG
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 236 ------------------------FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
+CK D+A LF +I R++ +WN I+ +G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
R EA+ F + R P+ + F + AC+ L+ G Q + LV++ GFD+D+SV N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 332 ALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH-------VLYYKAR 378
L+ Y KC I SE+ F + + VSW +++AA+ Q+ VLY ++R
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSR 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/320 (21%), Positives = 136/320 (42%), Gaps = 62/320 (19%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
LV F + DV N I + + I ++ +F +M TK+ V+W S++ AY + +
Sbjct: 234 LVLRSGFDT-DVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDE 292
Query: 86 HSRALF-----------DAMPMKNVVSWNAMVAG--------------CVQN-------- 112
+ L+ D M + +V+S A +AG CV+
Sbjct: 293 KASVLYLRSRKDIVETSDFM-ISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSAL 351
Query: 113 -DM------LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM------PCP 159
DM ++++ F MPE+N + N++I G+ G++ A LF+EM P P
Sbjct: 352 VDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTP 411
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMINGLVENGLYEEA 214
N +++ ++ G + +FD+M + ++ +++ L G+ E A
Sbjct: 412 NYMTFVSLLSA---CSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 468
Query: 215 WELFGRMPQKNVVASTAMITGFCK-QGKVD----EAWTLFQQIRCRDIASWNIMITGYAQ 269
+E +MP + ++ + C+ GK A LF ++ +D + ++ +A
Sbjct: 469 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLF-KLDPKDSGNHVLLSNTFAA 527
Query: 270 NGRGEEALNLFSQMVRTGMQ 289
GR EA + ++ G++
Sbjct: 528 AGRWAEANTVREELKGVGIK 547
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 224/457 (49%), Gaps = 38/457 (8%)
Query: 14 TPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNS 73
T S AR +F A+ ++ D ++ +AR++FD P + V WNS
Sbjct: 32 TKSKLARDPYFATQLARFYALND---------------DLISARKLFDVFPERSVFLWNS 76
Query: 74 MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA-- 131
++ AY + +LF + + N A C+ E+F+ A
Sbjct: 77 IIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYA-CLARG-FSESFDTKGLRCIHGIAIV 134
Query: 132 --------SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
+A++ + K G + +A +LF +P P++ + VMI GY G +
Sbjct: 135 SGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC---GFWDKG 191
Query: 184 RALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST----AMITG 235
LF+ M R N + + +GL++ L AW + + N+ + + A++
Sbjct: 192 INLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNM 251
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ + + A ++F I D+ + + +ITGY++ G +EAL+LF+++ +G +PD ++
Sbjct: 252 YSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLV 311
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
+ +CA L+ G++ ++ VI+ G + D+ V +AL+ MYSKCG + + F +
Sbjct: 312 AIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPE 371
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
+IVS+N++I H A F +++ +G+ PD ITF +LL CC +G +++ +
Sbjct: 372 KNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEI 431
Query: 416 FNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
F M ++GI P++EHY +V +M AG+L+ A E +
Sbjct: 432 FERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFV 468
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 176 bits (445), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 186/380 (48%), Gaps = 17/380 (4%)
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGR 145
H+ + + V + + C ++ A+ F + +N +N +I GF +
Sbjct: 45 HASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSSF 104
Query: 146 LCDAQRLFKEMPC------PNVVSYTVMIDGYVKV------KEGGGIARARALFDAMPRR 193
A +F +M C P ++Y + Y ++ ++ G+ L D R
Sbjct: 105 PEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIR 164
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIR 253
N M++ V G EAW +F M +VVA +MI GF K G +D+A LF ++
Sbjct: 165 N-----TMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMP 219
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
R+ SWN MI+G+ +NGR ++AL++F +M ++PD VSL ACA L +QGR
Sbjct: 220 QRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRW 279
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ ++++ F+ + V AL+ MY KCG I + F + + WN++I A +
Sbjct: 280 IHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGF 339
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
+A F ++ G+ PD ++F+ +L+ C +G++ + F LM Y I P +HY
Sbjct: 340 EERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYT 399
Query: 434 CLVDVMSRAGQLQRACEIIR 453
+V+V+ AG L+ A +I+
Sbjct: 400 LMVNVLGGAGLLEEAEALIK 419
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 174/408 (42%), Gaps = 85/408 (20%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF-DAMPMKNVVSWNAMVAGCV 110
++ A VF ++ K+ WN+++ + S FP+ + ++F D + V + V
Sbjct: 73 DMNYAYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSV 132
Query: 111 QN--DMLDEAFN-------YFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV 161
L +A + E ++ N M+ ++ G L +A R+F M +V
Sbjct: 133 FKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDV 192
Query: 162 VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM 221
V++ MI G+ K G I +A+ LFD MP+RN VSW MI+G V NG +++A ++F M
Sbjct: 193 VAWNSMIMGFAKC---GLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM 249
Query: 222 PQKNV---------------------------------------VASTAMITGFCKQGKV 242
+K+V + TA+I +CK G +
Sbjct: 250 QEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+E +F+ + ++ WN MI G A NG E A++LFS++ R+G++PD + F+ + TAC
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTAC 369
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
A + + + + L+ + +P I +
Sbjct: 370 AHSGEVHRADEFFRLMKEK------------------------------YMIEPSIKHYT 399
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
++ L +A + M V D + + SLLS C + G ++
Sbjct: 400 LMVNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLSACRKIGNVE 444
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 151/338 (44%), Gaps = 52/338 (15%)
Query: 46 AFSRAGNITAARQ----VFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVS 101
A+ R G RQ V + D N+ML Y G + +F M +VV+
Sbjct: 135 AYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVA 194
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV 161
WN+M+ G + ++D+A N F MP+RN S+N+MISGF++ GR DA +F+EM +V
Sbjct: 195 WNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDV 254
Query: 162 VSYTVMIDGYVKVK------EGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLY 211
DG+ V G + R + + + R N + T +I+ + G
Sbjct: 255 KP-----DGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCI 309
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
EE +F P+K + +MI G G F+
Sbjct: 310 EEGLNVFECAPKKQLSCWNSMILGLANNG--------FE--------------------- 340
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVN 330
E A++LFS++ R+G++PD + F+ + TACA + + + + L+ K+ + +
Sbjct: 341 --ERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHY 398
Query: 331 NALVTMYSKCGSIVDSE-LAFGQTSQPDIVSWNTIIAA 367
+V + G + ++E L + D V W+++++A
Sbjct: 399 TLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSA 436
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 147/335 (43%), Gaps = 29/335 (8%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
R H +++ K D + N + + G + A ++F M DVV WNSM+ +
Sbjct: 145 GRQLHGMVI--KEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGF 202
Query: 79 WHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN-AMI 137
G ++ LFD MP +N VSWN+M++G V+N +A + F M E++ M+
Sbjct: 203 AKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMV 262
Query: 138 S--------GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDA 189
S G + GR + + + N + T +ID Y K G I +F+
Sbjct: 263 SLLNACAYLGASEQGRWIH-EYIVRNRFELNSIVVTALIDMYCKC---GCIEEGLNVFEC 318
Query: 190 MPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEA 245
P++ W MI GL NG E A +LF + + + V+ ++T G+V A
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 246 WTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
F+ ++ + I + +M+ G EEA L M ++ D +I+ SL +
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNM---PVEEDTVIWSSLLS 435
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
AC + ++ ++ + K D D + L++
Sbjct: 436 ACRKIGNVEMAKRAAKCLKK--LDPDETCGYVLLS 468
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 175/333 (52%), Gaps = 16/333 (4%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N ++ ++K + A++LF EM PNVVS+T +I GY + G A ++F M
Sbjct: 68 NHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGY---NDMGKPQNALSMFQKMHED 124
Query: 194 -----NEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDE 244
NE ++ + + R+ ++N+V S++++ + K V+
Sbjct: 125 RPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVET 184
Query: 245 AWTLFQQI--RCRDIASWNIMITGYAQNGRGEEALNLFSQM--VRTGMQPDDLIFVSLFT 300
A +F + R++ SW MIT YAQN RG EA+ LF T + + + S+ +
Sbjct: 185 ARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVIS 244
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS 360
AC+SL L G+ + LV + G++S+ V +L+ MY+KCGS+ +E F + ++S
Sbjct: 245 ACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVIS 304
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
+ ++I A A+H L A FD+M+A + P+ +T L +L C +G ++E + +LM
Sbjct: 305 YTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMA 364
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
YG+ P S HY C+VD++ R G++ A E+ +
Sbjct: 365 EKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAK 397
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 176/413 (42%), Gaps = 83/413 (20%)
Query: 12 KPTPSSTARHTHFL--LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVV 69
K + S+ A T+ L L F+S D + N + ++ + I AR++FD+M +VV
Sbjct: 38 KLSESTNAAFTNLLHTLTLKLGFAS-DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVV 96
Query: 70 TWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE-R 128
+W S+++ Y G PQ++ ++F M V N V F +A+ E R
Sbjct: 97 SWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASV--------FKACSALAESR 148
Query: 129 NAASYNAM--ISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARAL 186
+ +A ISG + N+V + ++D Y K + + AR +
Sbjct: 149 IGKNIHARLEISGLRR-----------------NIVVSSSLVDMYGKCND---VETARRV 188
Query: 187 FDAMP--RRNEVSWTVMINGLVENGLYEEAWELF-------------------------- 218
FD+M RN VSWT MI +N EA ELF
Sbjct: 189 FDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSS 248
Query: 219 -GRMP--------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIM 263
GR+ + N V +T+++ + K G + A +F +IRC + S+ M
Sbjct: 249 LGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSM 308
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI-KHG 322
I A++G GE A+ LF +MV + P+ + + + AC+ L+++G + +L+ K+G
Sbjct: 309 IMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYG 368
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQT----SQPDIVSWNTIIAAFAQH 371
D +V M + G VD +T ++ + W +++A H
Sbjct: 369 VVPDSRHYTCVVDMLGRFGR-VDEAYELAKTIEVGAEQGALLWGALLSAGRLH 420
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 201/435 (46%), Gaps = 62/435 (14%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYF--------- 122
NS++ Y +R +FD M ++++SWN+++AG QN + EA F
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 123 -------------AAMPERNAASYN------------------AMISGFIKFGRLCDAQR 151
+++PE + S A+I + + + +A+
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
LF E ++V++ M+ GY + +G + LF M ++ E S + ++
Sbjct: 474 LF-ERHNFDLVAWNAMMAGYTQSHDG---HKTLKLFALMHKQGERS-----DDFTLATVF 524
Query: 212 EEAWELFGRMPQKNVVA-------------STAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
+ LF K V A S+ ++ + K G + A F I D
Sbjct: 525 KTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV 584
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
+W MI+G +NG E A ++FSQM G+ PD+ +L A + L L+QGRQ +A
Sbjct: 585 AWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANA 644
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+K +D V +LV MY+KCGSI D+ F + +I +WN ++ AQH +
Sbjct: 645 LKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETL 704
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F QM ++G++PD +TF+ +LS C +G + E+ M DYGI P EHY+CL D
Sbjct: 705 QLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADA 764
Query: 439 MSRAGQLQRACEIIR 453
+ RAG +++A +I
Sbjct: 765 LGRAGLVKQAENLIE 779
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 197/428 (46%), Gaps = 60/428 (14%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFP-----QHSRALFDAMPMKN 98
I+ +S+ G++T AR+VFDKMP +D+V+WNS+L AY S Q + LF +
Sbjct: 81 ISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDV 140
Query: 99 V----VSWNAMVAGCVQNDML--DEAFNYFAAMPERNAASY--NAMISGFIKFGRLCDAQ 150
V ++ + M+ C+ + + E+F+ +A + + A+++ ++KFG++ + +
Sbjct: 141 VYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGK 200
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
LF+EMP +VV W +M+ +E G
Sbjct: 201 VLFEEMPYRDVV----------------------------------LWNLMLKAYLEMGF 226
Query: 211 YEEAWEL------FGRMPQKNVVASTAMITG-FCKQGKVDEAWTLFQQIRCRDIASWNIM 263
EEA +L G P + + A I+G G+V +I N
Sbjct: 227 KEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKG 286
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
++ Y +G+ L F+ MV + ++ D + F+ + + L G+Q + + +K G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
D L+V+N+L+ MY K + F S+ D++SWN++IA AQ+ L +A F Q
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN-LMVHDYGIPPRSEHY--ACLVDVMS 440
++ G++PD T S+L A + E ++L + VH I S+ + L+D S
Sbjct: 407 LLRCGLKPDQYTMTSVLKA---ASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 441 RAGQLQRA 448
R ++ A
Sbjct: 464 RNRCMKEA 471
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 120/422 (28%), Positives = 211/422 (50%), Gaps = 28/422 (6%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+S++GN + A F ++ +D+ +W S++ + SG + S +F M K + + +V
Sbjct: 275 YSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHP-DGVV 333
Query: 107 AGCVQNDM-------LDEAFNYFAAMP--ERNAASYNAMISGFIKFGRLCDAQRLFKEMP 157
C+ N++ +AF+ F ++ N+++S + KF L A++LF +
Sbjct: 334 ISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRIS 393
Query: 158 CP-NVVSYTVMIDGYVKVK-EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
N ++ M+ GY K+K I R + + + S T +I+ G
Sbjct: 394 EEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAV---- 449
Query: 216 ELFGRMPQKNVVAST---------AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITG 266
L G+ VV ++ ++I + K G + AW +F + ++ +WN MI
Sbjct: 450 -LLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWNAMIAS 507
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
Y + E+A+ LF +MV +P + V+L AC + L++G+ + + + + +
Sbjct: 508 YVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMN 567
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
LS++ AL+ MY+KCG + S F +Q D V WN +I+ + H A + FDQM
Sbjct: 568 LSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEE 627
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
V+P G TFL+LLS C AG +++ LF L +H Y + P +HY+CLVD++SR+G L+
Sbjct: 628 SDVKPTGPTFLALLSACTHAGLVEQGKKLF-LKMHQYDVKPNLKHYSCLVDLLSRSGNLE 686
Query: 447 RA 448
A
Sbjct: 687 EA 688
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 188/395 (47%), Gaps = 20/395 (5%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +++ A+ I++++ G + +VF + +D+ WNS++ A++ +G S F +
Sbjct: 56 SENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFS 115
Query: 94 MPMK----NVVSWNAMVAGCVQNDMLD-EAFNYFAAMP----ERNAASYNAMISGFIKFG 144
M + + + +V+ C + F + + +RN A + + + K G
Sbjct: 116 MLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCG 175
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG-GGIARARALFDA-------MPRRNEV 196
L DA +F EMP +VV++T +I G+V+ E GG+ + A PR E
Sbjct: 176 FLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLEC 235
Query: 197 SWTVMIN-GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
+ N G ++ G + + + V S+ M + + K G EA+ F+++
Sbjct: 236 GFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSS-MFSFYSKSGNPSEAYLSFRELGDE 294
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
D+ SW +I A++G EE+ ++F +M GM PD ++ L + L+ QG+ +
Sbjct: 295 DMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFH 354
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP-DIVSWNTIIAAFAQHVLY 374
VI+H F D +V N+L++MY K + +E F + S+ + +WNT++ + + +
Sbjct: 355 GFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCH 414
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
K F ++ +G+ D + S++S C G +
Sbjct: 415 VKCIELFRKIQNLGIEIDSASATSVISSCSHIGAV 449
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 196/422 (46%), Gaps = 28/422 (6%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTK-DVVTWNSMLTAYWHSGFPQHSR 88
+H S D N ++ + + ++ A ++F ++ + + WN+ML Y H +
Sbjct: 359 RHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGY--GKMKCHVK 416
Query: 89 ALFDAMPMKNV------VSWNAMVAGC--VQNDMLDEAFNYFAAMP--ERNAASYNAMIS 138
+ ++N+ S ++++ C + +L ++ + + + + N++I
Sbjct: 417 CIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLID 476
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN---- 194
+ K G L A R+F E NV+++ MI YV ++ +A ALFD M N
Sbjct: 477 LYGKMGDLTVAWRMFCEAD-TNVITWNAMIASYVHCEQS---EKAIALFDRMVSENFKPS 532
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQ 250
++ ++ V G E + + + N+ S A+I + K G ++++ LF
Sbjct: 533 SITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFD 592
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
+D WN+MI+GY +G E A+ LF QM + ++P F++L +AC L++Q
Sbjct: 593 AGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQ 652
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE-LAFGQTSQPDIVSWNTIIAAFA 369
G++ + + ++ +L + LV + S+ G++ ++E PD V W T++++
Sbjct: 653 GKKLFLKMHQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCM 712
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRS 429
H + ++ +A + DG ++ L ++ AGK +E+ +M + G+ R+
Sbjct: 713 THGEFEMGIRMAERAVASDPQNDGY-YIMLANMYSAAGKWEEAERAREMM-RESGVGKRA 770
Query: 430 EH 431
H
Sbjct: 771 GH 772
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
Query: 224 KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
+N+ ++ +I+ + GK + + +F + RDI WN +I + NG +L F M
Sbjct: 57 ENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSM 116
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCGS 342
+ +G PD + +ACA L G + LV+KH GFD + +V + V YSKCG
Sbjct: 117 LLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGF 176
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV---RPDGITFLSL 399
+ D+ L F + D+V+W II+ Q+ Y +M + G +P+ T
Sbjct: 177 LQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECG 236
Query: 400 LSVCCRAGKIDESMNLFNLMVHD 422
C G + E L V +
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKN 259
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%)
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
L+ R+ AL+I G ++ V + L++ Y+ G S F ++ DI WN+II A
Sbjct: 40 LESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKA 99
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
+ Y ++ +F M+ G PD T ++S C + L++ G
Sbjct: 100 HFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDR 159
Query: 428 RSEHYACLVDVMSRAGQLQRAC 449
+ A V S+ G LQ AC
Sbjct: 160 NTAVGASFVYFYSKCGFLQDAC 181
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 122/432 (28%), Positives = 204/432 (47%), Gaps = 58/432 (13%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM-----P 126
NS+L Y S +R LFD M ++V+SW+ ++ VQ+ F M
Sbjct: 164 NSILCMYADSD-SLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKT 222
Query: 127 ERNAASYNAMISGF-----IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
E + + +++ I GR + + +V +ID Y K G +
Sbjct: 223 EPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSK---GFDVD 279
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----------------- 224
A +FD RN VSW ++ G V N Y+EA E+F M Q+
Sbjct: 280 SAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCK 339
Query: 225 ----------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
N VA +++I + VD+A T+ + +D+ S +
Sbjct: 340 FFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCST 399
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
MI+G A GR +EA+++F M T P+ + +SL AC+ A L + + + I+
Sbjct: 400 MISGLAHAGRSDEAISIFCHMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRS 456
Query: 323 FD-SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
+D+SV ++V Y+KCG+I + F Q ++ +I+SW II+A+A + L KA + F
Sbjct: 457 LAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALF 516
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
D+M G P+ +T+L+ LS C G + + + +F MV + P +HY+C+VD++SR
Sbjct: 517 DEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIVDMLSR 575
Query: 442 AGQLQRACEIIR 453
AG++ A E+I+
Sbjct: 576 AGEIDTAVELIK 587
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 4/176 (2%)
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ K G + F + RD SWN+++ G G EE L FS++ G +P+
Sbjct: 71 YMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTL 130
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
V + AC SL G + + VI+ GF SV N+++ MY+ S+ +L F + S+
Sbjct: 131 VLVIHACRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKL-FDEMSE 187
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKID 410
D++SW+ +I ++ Q F +M+ PD +T S+L C ID
Sbjct: 188 RDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDID 243
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 135/348 (38%), Gaps = 93/348 (26%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
+ F DV+ N I +S+ ++ +A +VFD+ +++V+WNS+L + H+ +
Sbjct: 255 RGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALE 314
Query: 90 LFDAM--------------------------PMK-------------NVVSWNAMVAGCV 110
+F M P K N V+ ++++
Sbjct: 315 MFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYT 374
Query: 111 QNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM-PCPNVVSY----- 164
++D+A +M ++ S + MISG GR +A +F M PN ++
Sbjct: 375 SCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLN 434
Query: 165 -------------------------------TVMIDGYVKVKEGGGIARARALFDAMPRR 193
T ++D Y K G I AR FD + +
Sbjct: 435 ACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKC---GAIEMARRTFDQITEK 491
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLF 249
N +SWTV+I+ NGL ++A LF M QK N V A ++ G V + +F
Sbjct: 492 NIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIF 551
Query: 250 QQIRCRD----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ + D + ++ ++ ++ G + A+ L + P+D+
Sbjct: 552 KSMVEEDHKPSLQHYSCIVDMLSRAGEIDTAVELIKNL------PEDV 593
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 20/151 (13%)
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD-LIFVSLFTACASLALLDQGR 312
C + + + I + +G+ E ++ +S++ R G+Q +D +F +F ACA L+ L QG
Sbjct: 6 CSKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQG- 64
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
N++ Y KCG + F + D VSWN I+ +
Sbjct: 65 ------------------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYG 106
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
+ +F ++ G P+ T + ++ C
Sbjct: 107 FEEEGLWWFSKLRVWGFEPNTSTLVLVIHAC 137
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 191/365 (52%), Gaps = 17/365 (4%)
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV 161
WN++V ++ A FA MP + +S+N MI G+ K G +A +L+ +M +
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 162 V--SYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV--SWTVMINGLV-------ENGL 210
YTV+ V I + + + RR V S ++ N L+ E+GL
Sbjct: 229 EPDEYTVL-SLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGL 287
Query: 211 YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQN 270
+ A F M +K++ + M+ GF + G ++ A +F Q+ RD+ SWN ++ GY++
Sbjct: 288 AKRA---FDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKK 344
Query: 271 GRGEEAL-NLFSQM-VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
G + + LF +M + ++PD + VSL + A+ L GR + LVI+ D
Sbjct: 345 GCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAF 404
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
+++AL+ MY KCG I + + F ++ D+ W ++I A H +A F +M G
Sbjct: 405 LSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEG 464
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
V P+ +T L++L+ C +G ++E +++FN M +G P +EHY LVD++ RAG+++ A
Sbjct: 465 VTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEA 524
Query: 449 CEIIR 453
+I++
Sbjct: 525 KDIVQ 529
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 176/386 (45%), Gaps = 61/386 (15%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF------ 91
Y N + + GN A +VF +MP DV ++N M+ Y GF + L+
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD 226
Query: 92 --------------------DAMPMKNVVSW---------------NA---MVAGCVQND 113
D K V W NA M C ++
Sbjct: 227 GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 114 MLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK 173
+ AF+ AM +++ S+N M+ GF++ G + AQ +F +MP ++VS+ ++ GY
Sbjct: 287 LAKRAFD---AMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGY-- 341
Query: 174 VKEGGGIARARALFDAMP-----RRNEVSWTVMINGLVENGLYEEAWELFG---RMPQK- 224
K+G R LF M + + V+ +I+G NG + G R+ K
Sbjct: 342 SKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKG 401
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+ S+A+I +CK G ++ A+ +F+ +D+A W MITG A +G G++AL LF +M
Sbjct: 402 DAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQ 461
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSI 343
G+ P+++ +++ TAC+ L+++G + + K GFD + +LV + + G +
Sbjct: 462 EEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRV 521
Query: 344 VDSE--LAFGQTSQPDIVSWNTIIAA 367
+++ + +P W +I++A
Sbjct: 522 EEAKDIVQKKMPMRPSQSMWGSILSA 547
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 130/269 (48%), Gaps = 30/269 (11%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV-----AGCV 110
A++ FD M KD+ +WN+M+ + G + ++A+FD MP +++VSWN+++ GC
Sbjct: 288 AKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCD 347
Query: 111 QNDMLDEAFNYFAAMPERNAASYNAMIS--------GFIKFGRLCDAQRLFKEMPCPNVV 162
Q + E F Y + E+ M+S G + GR + ++ +
Sbjct: 348 QRT-VRELF-YEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFL 405
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP 222
S + +ID Y K G I RA +F ++ WT MI GL +G ++A +LFGRM
Sbjct: 406 S-SALIDMYCKC---GIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQ 461
Query: 223 QKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRG 273
++ V V A++T G V+E +F ++ + + + ++ + GR
Sbjct: 462 EEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRV 521
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
EEA ++ + + M+P ++ S+ +AC
Sbjct: 522 EEAKDIVQK--KMPMRPSQSMWGSILSAC 548
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
++ +N MI+ A + E L+S M+R + PD F+ L A + L + +Q +
Sbjct: 99 NVFVYNTMIS--AVSSSKNECFGLYSSMIRHRVSPDRQTFLYLMKAS---SFLSEVKQIH 153
Query: 316 ALVIKHGFDSDLSVN----NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
+I G LS+ N+LV Y + G+ +E F + PD+ S+N +I +A+
Sbjct: 154 CHIIVSGC---LSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQ 210
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
+A + +M++ G+ PD T LSLL VCC
Sbjct: 211 GFSLEALKLYFKMVSDGIEPDEYTVLSLL-VCC 242
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 205/432 (47%), Gaps = 49/432 (11%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+ N+++T Y G + +R LFD MP ++++SWNAM++G +N M E F AM
Sbjct: 230 DIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMR 289
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYV------KVKEGGGI 180
+ ++ I L +RL +++ V++ +D V G
Sbjct: 290 GLSVDPDLMTLTSVISACELLGDRRLGRDIH-AYVITTGFAVDISVCNSLTQMYLNAGSW 348
Query: 181 ARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV-------------- 226
A LF M R++ VSWT MI+G N L ++A + + M Q +V
Sbjct: 349 REAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSAC 408
Query: 227 -------------------------VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
+ + +I + K +D+A +F I +++ SW
Sbjct: 409 ATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWT 468
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
+I G N R EAL QM T +QP+ + + ACA + L G++ +A V++
Sbjct: 469 SIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRT 527
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
G D + NAL+ MY +CG + + F + + D+ SWN ++ +++ F
Sbjct: 528 GVGLDDFLPNALLDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELF 586
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
D+M+ VRPD ITF+SLL C ++ + + + F+ M DYG+ P +HYAC+VD++ R
Sbjct: 587 DRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGR 645
Query: 442 AGQLQRACEIIR 453
AG+LQ A + I+
Sbjct: 646 AGELQEAHKFIQ 657
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 155/361 (42%), Gaps = 82/361 (22%)
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM------ 156
NA +A V+ L +A+ F M ERN S+N ++ G+ K G +A L+ M
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 157 -------PCP------------------NVVSY---------TVMIDGYVKVKEGGGIAR 182
PC +VV Y +I YVK G +
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKC---GDVKS 249
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV---------------- 226
AR LFD MPRR+ +SW MI+G ENG+ E ELF M +V
Sbjct: 250 ARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL 309
Query: 227 ---------VASTAMITGFC--------------KQGKVDEAWTLFQQIRCRDIASWNIM 263
+ + + TGF G EA LF ++ +DI SW M
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I+GY N ++A++ + M + ++PD++ ++ +ACA+L LD G + + L IK
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARL 429
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
S + V N L+ MYSKC I + F + +++SW +IIA + ++A + Q
Sbjct: 430 ISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 384 M 384
M
Sbjct: 490 M 490
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 107/184 (58%), Gaps = 1/184 (0%)
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
M V A + F + G + +AW +F ++ R++ SWN+++ GYA+ G +EA+ L+
Sbjct: 124 MSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLY 183
Query: 281 SQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSK 339
+M+ G++PD F + C + L +G++ + V+++G++ D+ V NAL+TMY K
Sbjct: 184 HRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVK 243
Query: 340 CGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSL 399
CG + + L F + + DI+SWN +I+ + ++ + ++ F M + V PD +T S+
Sbjct: 244 CGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSV 303
Query: 400 LSVC 403
+S C
Sbjct: 304 ISAC 307
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 158/352 (44%), Gaps = 51/352 (14%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+ NS+ Y ++G + + LF M K++VSW M++G N + D+A + + M
Sbjct: 331 DISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMD 390
Query: 127 ERNAA----SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV----MIDGYVKVKEGG 178
+ + + A++S G L L K ++SY + +I+ Y K K
Sbjct: 391 QDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCK--- 447
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP---QKNVVAS------ 229
I +A +F +PR+N +SWT +I GL N EA +M Q N +
Sbjct: 448 CIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMTLQPNAITLTAALAA 507
Query: 230 -----------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
A++ + + G+++ AW+ F + +D+ SW
Sbjct: 508 CARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSW 566
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
NI++TGY++ G+G + LF +MV++ ++PD++ F+SL C+ ++ QG ++ +
Sbjct: 567 NILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED 626
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQH 371
+G +L +V + + G + ++ + PD W ++ A H
Sbjct: 627 YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIH 678
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
+ G NG+ EEA+ L + M + D+ +FV+L C ++G + Y++ +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
+ + NA + M+ + G++VD+ FG+ S+ ++ SWN ++ +A+ + +A + +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 384 MIAV-GVRPDGITFLSLLSVC 403
M+ V GV+PD TF +L C
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTC 206
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 201/435 (46%), Gaps = 51/435 (11%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
+VV S++ Y + + + ++ ++V W ++V+G V+N EA F M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 127 ----ERNAASYNAMIS-----GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
+ N +Y+A++S + FG+ +Q + V ++D Y+K
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVG-NALVDMYMKCS-- 374
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----------- 226
A +F AM N VSWT +I GLV++G ++ + L M ++ V
Sbjct: 375 ASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVL 434
Query: 227 ----------------------------VASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
V +++ + KVD AW + + ++ RD
Sbjct: 435 RACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNI 494
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
++ ++T + + G+ E AL++ + M G++ D L +A A+L L+ G+ +
Sbjct: 495 TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYS 554
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+K GF SV N+LV MYSKCGS+ D++ F + + PD+VSWN +++ A + A
Sbjct: 555 VKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSAL 614
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
S F++M PD +TFL LLS C D + F +M Y I P+ EHY LV +
Sbjct: 615 SAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGI 674
Query: 439 MSRAGQLQRACEIIR 453
+ RAG+L+ A ++
Sbjct: 675 LGRAGRLEEATGVVE 689
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 178/391 (45%), Gaps = 45/391 (11%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNV 99
++ + + I AR++FD+M + V W M++A+ S + +LF+ M N
Sbjct: 65 LSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNE 124
Query: 100 VSWNAMVAGC-----------VQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCD 148
+++++V C V ++ F E N+ +++ + K G+ +
Sbjct: 125 FTFSSVVRSCAGLRDISYGGRVHGSVIKTGF-------EGNSVVGSSLSDLYSKCGQFKE 177
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMING 204
A LF + + +S+T+MI V ++ A + M + NE ++ ++
Sbjct: 178 ACELFSSLQNADTISWTMMISSLVGARK---WREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 205 LVENGLYEEAWELFGRMPQK---------NVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
GL FG+ NVV T+++ + + K+++A + +
Sbjct: 235 SSFLGLE------FGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ 288
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
D+ W +++G+ +N R +EA+ F +M G+QP++ + ++ + C+++ LD G+Q +
Sbjct: 289 DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIH 348
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKC-GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ IK GF+ V NALV MY KC S V++ FG P++VSW T+I H
Sbjct: 349 SQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFV 408
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
+M+ V P+ +T +L C +
Sbjct: 409 QDCFGLLMEMVKREVEPNVVTLSGVLRACSK 439
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 149/289 (51%), Gaps = 20/289 (6%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM--- 190
N ++S ++K + +A++LF EM V ++TVMI + K +E A A +LF+ M
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE---FASALSLFEEMMAS 118
Query: 191 -PRRNEVSWTVMINGLVENGLYEEAWELFGRMP--------QKNVVASTAMITGFCKQGK 241
NE +++ ++ GL + ++ GR+ + N V +++ + K G+
Sbjct: 119 GTHPNEFTFSSVVRSCA--GLRDISYG--GRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQ 174
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
EA LF ++ D SW +MI+ + EAL +S+MV+ G+ P++ FV L A
Sbjct: 175 FKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGA 234
Query: 302 CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
+ L L + G+ ++ +I G ++ + +LV YS+ + D+ + + D+ W
Sbjct: 235 SSFLGL-EFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLW 293
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
++++ F +++ +A F +M ++G++P+ T+ ++LS+C +D
Sbjct: 294 TSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLD 342
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 5/215 (2%)
Query: 241 KVDEAWT---LFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
K D W LF ++ R + +W +MI+ + ++ AL+LF +M+ +G P++ F S
Sbjct: 70 KTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSS 129
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
+ +CA L + G + + VIK GF+ + V ++L +YSKCG ++ F D
Sbjct: 130 VVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNAD 189
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
+SW +I++ + +A ++ +M+ GV P+ TF+ LL G N
Sbjct: 190 TISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSN 249
Query: 418 LMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
++V GIP LVD S+ +++ A ++
Sbjct: 250 IIVR--GIPLNVVLKTSLVDFYSQFSKMEDAVRVL 282
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 9/145 (6%)
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G + VIK G +L + N L+++Y K I ++ F + S + +W +I+AF +
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH----DYGIP 426
+ A S F++M+A G P+ TF S++ C AG D S + VH G
Sbjct: 102 SQEFASALSLFEEMMASGTHPNEFTFSSVVRSC--AGLRDIS---YGGRVHGSVIKTGFE 156
Query: 427 PRSEHYACLVDVMSRAGQLQRACEI 451
S + L D+ S+ GQ + ACE+
Sbjct: 157 GNSVVGSSLSDLYSKCGQFKEACEL 181
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 18/158 (11%)
Query: 29 AKHFSSYDVYRA--------NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
KH Y V N + +S+ G++ A++VF+++ T DVV+WN +++
Sbjct: 547 GKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLAS 606
Query: 81 SGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAA 131
+GF + + F+ M MK V++ +++ C + D YF M E
Sbjct: 607 NGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVE 666
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPC-PNVVSYTVMI 168
Y ++ + GRL +A + + M PN + + ++
Sbjct: 667 HYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLL 704
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 172 bits (436), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 195/426 (45%), Gaps = 52/426 (12%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
S++ Y+ G +R +FD + +++V W AM+AG N EA F M
Sbjct: 253 TSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKI 312
Query: 132 SYNAMISGFI----------KFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
N++I I K G+ A L + ++ +ID Y K G +A
Sbjct: 313 YPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKC---GDMA 369
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----------------- 224
R +F +RN +SWT +++G NG +++A M Q+
Sbjct: 370 SGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCA 429
Query: 225 ----------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
NV T+++ + K G + LF ++ R++ +W
Sbjct: 430 ELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTA 489
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
MI Y +N + +F M+ + +PD + + T C+ L L G++ + ++K
Sbjct: 490 MIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKE 549
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
F+S V+ ++ MY KCG + + +F + ++W II A+ + L+ A + F+
Sbjct: 550 FESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFE 609
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
QM++ G P+ TF ++LS+C +AG +DE+ FNLM+ Y + P EHY+ ++++++R
Sbjct: 610 QMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRC 669
Query: 443 GQLQRA 448
G+++ A
Sbjct: 670 GRVEEA 675
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 190/461 (41%), Gaps = 73/461 (15%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
S + R L + ++ G++ A++VFD+ + +V +WN++L SG ++ L
Sbjct: 142 LESNEFLRTKL-VHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLS 200
Query: 92 DAMPMKNV-VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQ 150
M+ + V N L F FA +A+ G +K L
Sbjct: 201 TFTEMRELGVDLNVY--------SLSNVFKSFAGA--------SALRQG-LKTHALAIKN 243
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGL 210
LF +V T ++D Y K G + AR +FD + R+ V W MI GL N
Sbjct: 244 GLFN-----SVFLKTSLVDMYFKC---GKVGLARRVFDEIVERDIVVWGAMIAGLAHNKR 295
Query: 211 YEEAWELFGRM-------------------------------------PQKNVVAS---- 229
EA LF M KN V
Sbjct: 296 QWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVH 355
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
+ +I +CK G + +F + R+ SW +++GYA NGR ++AL M + G +
Sbjct: 356 SGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFR 415
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
PD + ++ CA L + QG++ + +K+ F ++S+ +L+ MYSKCG
Sbjct: 416 PDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRL 475
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC--RAG 407
F + Q ++ +W +I + ++ F M+ RPD +T +L+VC +A
Sbjct: 476 FDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKAL 535
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
K+ + ++ L IP S A ++ + + G L+ A
Sbjct: 536 KLGKELHGHILKKEFESIPFVS---ARIIKMYGKCGDLRSA 573
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 2/125 (1%)
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+A+ E AL + + + G+ + F +L AC L G+Q + + +G +S+
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII--AAFAQHVLYYKARSYFDQM 384
+ LV MY+ CGS+ D++ F +++ ++ SWN ++ + Y S F +M
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 385 IAVGV 389
+GV
Sbjct: 206 RELGV 210
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 101/235 (42%), Gaps = 24/235 (10%)
Query: 63 MPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYF 122
+P +VT S++ Y G P++ LFD + +NV +W AM+ V+N L F
Sbjct: 450 LPNVSLVT--SLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVF 507
Query: 123 AAM----PERNAASYNAMIS-----GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK 173
M ++ + +++ +K G+ L KE VS + I Y K
Sbjct: 508 RLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARI-IKMYGK 566
Query: 174 VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMI 233
G + A FDA+ + ++WT +I N L+ +A F +M + +T
Sbjct: 567 C---GDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTF 623
Query: 234 TG---FCKQ-GKVDEAWTLFQ-QIRCRDI----ASWNIMITGYAQNGRGEEALNL 279
T C Q G VDEA+ F +R ++ ++++I + GR EEA L
Sbjct: 624 TAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 124/456 (27%), Positives = 212/456 (46%), Gaps = 51/456 (11%)
Query: 46 AFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG-FPQHSRALFDAMPMKNVVSWNA 104
++++ G A + + ++ N+++ Y G PQ R L M +VV+WN+
Sbjct: 298 SYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERIL-RQMNNADVVTWNS 356
Query: 105 MVAGCVQNDMLDEAFNYF----AAMPERNAASYNAMISGFIKFGRLCDAQRL----FKEM 156
++ G VQN M EA +F AA + + S ++I+ + L L K
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE 216
N+ +ID Y K + RA F M ++ +SWT +I G +N + EA E
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRA---FLRMHDKDLISWTTVIAGYAQNDCHVEALE 473
Query: 217 LFGRMPQK--------------------------------------NVVASTAMITGFCK 238
LF + +K + V ++ + K
Sbjct: 474 LFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGK 533
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
+ A +F+ I+ +D+ SW MI+ A NG EA+ LF +MV TG+ D + + +
Sbjct: 534 CRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
+A ASL+ L++GR+ + +++ GF + S+ A+V MY+ CG + ++ F + + +
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGL 653
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
+ + ++I A+ H A FD+M V PD I+FL+LL C AG +DE +
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKI 713
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
M H+Y + P EHY CLVD++ RA + A E +++
Sbjct: 714 MEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKM 749
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 186/460 (40%), Gaps = 62/460 (13%)
Query: 12 KPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQ-----------VF 60
+P + + F V + F DV N + AF+ + R+ +F
Sbjct: 48 QPVQVPSPKLACFDGVLTEAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIF 107
Query: 61 DKMPTKDV-VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAF 119
P+ ++ ++ Y G + +FD MP + +WN M+ V N A
Sbjct: 108 KTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASAL 167
Query: 120 NYFAAMPERNA----ASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV- 174
+ M +S+ A++ K + L + S +++ V +
Sbjct: 168 ALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMY 227
Query: 175 KEGGGIARARALFDAMPRRNE-VSWTVMINGLVENGLYEEAWELFGRM------PQKNVV 227
+ ++ AR LFD + + V W +++ +G E ELF M P +
Sbjct: 228 AKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTI 287
Query: 228 AS----------------------------------TAMITGFCKQGKVDEAWTLFQQIR 253
S A+I + + GK+ +A + +Q+
Sbjct: 288 VSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN 347
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
D+ +WN +I GY QN +EAL FS M+ G + D++ S+ A L+ L G +
Sbjct: 348 NADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+A VIKHG+DS+L V N L+ MYSKC AF + D++SW T+IA +AQ+
Sbjct: 408 LHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDC 467
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
+ +A F + + D + S+L RA + +SM
Sbjct: 468 HVEALELFRDVAKKRMEIDEMILGSIL----RASSVLKSM 503
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 143/306 (46%), Gaps = 34/306 (11%)
Query: 115 LDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV----VSYTVMIDG 170
LD+A F MP+R A ++N MI ++ G A L+ M V S+ ++
Sbjct: 132 LDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKA 191
Query: 171 YVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST 230
K+++ I L + + S ++N LV +Y + ++ A+
Sbjct: 192 CAKLRD---IRSGSELHSLLVKLGYHSTGFIVNALV--SMYAK---------NDDLSAAR 237
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
+ GF ++G D WN +++ Y+ +G+ E L LF +M TG P
Sbjct: 238 RLFDGFQEKG---------------DAVLWNSILSSYSTSGKSLETLELFREMHMTGPAP 282
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHG-FDSDLSVNNALVTMYSKCGSIVDSELA 349
+ VS TAC + G++ +A V+K S+L V NAL+ MY++CG + +E
Sbjct: 283 NSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERI 342
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
Q + D+V+WN++I + Q+++Y +A +F MIA G + D ++ S+++ R +
Sbjct: 343 LRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNL 402
Query: 410 DESMNL 415
M L
Sbjct: 403 LAGMEL 408
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 109/226 (48%), Gaps = 15/226 (6%)
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
+ K G +D+A +F ++ R +WN MI Y NG AL L+ M G+ F
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF-GQTS 354
+L ACA L + G + ++L++K G+ S + NALV+MY+K + + F G
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC-----CRAGKI 409
+ D V WN+I+++++ + F +M G P+ T +S L+ C + GK
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGK- 304
Query: 410 DESMNLFNLMVHDYGIPPRSEHYAC--LVDVMSRAGQLQRACEIIR 453
+ ++ H SE Y C L+ + +R G++ +A I+R
Sbjct: 305 EIHASVLKSSTHS------SELYVCNALIAMYTRCGKMPQAERILR 344
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 295 FVSLFTACASLALLDQGRQTYALVIKH--GFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
F + C + QGRQ ++ + K F+ D + LV MY KCGS+ D+E F +
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI-TFLSLLSVCCRAGKIDE 411
+WNT+I A+ + A + + M GV P G+ +F +LL C + I
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV-PLGLSSFPALLKACAKLRDIRS 200
Query: 412 SMNLFNLMV 420
L +L+V
Sbjct: 201 GSELHSLLV 209
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 203/433 (46%), Gaps = 39/433 (9%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAY-----WHSGFPQHSRALFDAMPMK--NV 99
+S+ G IT A+ +F K+VV+WN+M+ + H F + L +K V
Sbjct: 337 YSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEV 396
Query: 100 VSWNAMVAGCVQNDMLD--EAFNYFAAMPE--RNAASYNAMISGFIKFGRLCDAQRLFKE 155
NA V C L + + ++ E N NA ++ + K G L AQR+F
Sbjct: 397 TILNA-VPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG 455
Query: 156 MPCPNVVSYTVMI-------------DGYVKVKEGGGIARAR---ALFDAMPRRNEVSWT 199
+ V S+ +I D ++++K G + + +L A + +
Sbjct: 456 IRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLG 515
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
++G + E +++ ++++ + G++ LF + + + S
Sbjct: 516 KEVHGFIIRNWLE-----------RDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVS 564
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN +ITGY QNG + AL +F QMV G+Q + + +F AC+ L L GR+ +A +
Sbjct: 565 WNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYAL 624
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
KH + D + +L+ MY+K GSI S F + SWN +I + H L +A
Sbjct: 625 KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIK 684
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F++M G PD +TFL +L+ C +G I E + + M +G+ P +HYAC++D++
Sbjct: 685 LFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDML 744
Query: 440 SRAGQLQRACEII 452
RAGQL +A ++
Sbjct: 745 GRAGQLDKALRVV 757
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/563 (20%), Positives = 216/563 (38%), Gaps = 141/563 (25%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
R H L+ + + DV + I ++ G+ +R VFD + +K++ WN+++++Y
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRI-ITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSY 161
Query: 79 WHSGFPQHSRALF-------DAMP---------------------------------MKN 98
+ F D +P +++
Sbjct: 162 SRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVED 221
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
V NA+V+ + + +A F MPERN S+N+MI F G ++ L EM
Sbjct: 222 VFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMME 281
Query: 159 PN-------------------------------------------VVSYTVMIDGYVKVK 175
N +V ++D Y K
Sbjct: 282 ENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKC- 340
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM-------------- 221
G I A+ +F +N VSW M+ G G +++ +M
Sbjct: 341 --GCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI 398
Query: 222 ------------------------PQK---NVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
Q+ N + + A + + K G + A +F IR
Sbjct: 399 LNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRS 458
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
+ + SWN +I G+AQ+ +L+ QM +G+ PD SL +AC+ L L G++
Sbjct: 459 KTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEV 518
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ +I++ + DL V +++++Y CG + + F +VSWNT+I + Q+
Sbjct: 519 HGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFP 578
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCC-----RAGKIDESMNLFNLMVHDYGIPPRS 429
+A F QM+ G++ GI+ + + C R G+ + L +L+ D I
Sbjct: 579 DRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI---- 634
Query: 430 EHYAC-LVDVMSRAGQLQRACEI 451
AC L+D+ ++ G + ++ ++
Sbjct: 635 ---ACSLIDMYAKNGSITQSSKV 654
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 174/363 (47%), Gaps = 36/363 (9%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
Y+ AN +A++++ G+++ A++VF + +K V +WN+++ + S P+ S M
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQM 487
Query: 95 PMKNVV----SWNAMVAGC--VQNDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRL 146
+ ++ + ++++ C +++ L + + F ER+ Y +++S +I G L
Sbjct: 488 KISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGEL 547
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGL- 205
C Q LF M ++VS+ +I GY+ + G RA +F R V + + + G+
Sbjct: 548 CTVQALFDAMEDKSLVSWNTVITGYL---QNGFPDRALGVF-----RQMVLYGIQLCGIS 599
Query: 206 -------------VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQI 252
+ G A+ L + + + + ++I + K G + ++ +F +
Sbjct: 600 MMPVFGACSLLPSLRLGREAHAYAL-KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGL 658
Query: 253 RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG- 311
+ + ASWN MI GY +G +EA+ LF +M RTG PDDL F+ + TAC L+ +G
Sbjct: 659 KEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGL 718
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL---AFGQTSQPDIVSWNTIIAAF 368
R + G +L ++ M + G + D L A + + D+ W +++++
Sbjct: 719 RYLDQMKSSFGLKPNLKHYACVIDMLGRAGQL-DKALRVVAEEMSEEADVGIWKSLLSSC 777
Query: 369 AQH 371
H
Sbjct: 778 RIH 780
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 148/327 (45%), Gaps = 33/327 (10%)
Query: 137 ISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
IS F + G L + R +E + S D ++ V+E G+ L A +R ++
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSS----DAFLLVREALGL-----LLQASGKRKDI 100
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
I+ LV R+ +V+ T +IT + G D++ +F +R ++
Sbjct: 101 EMGRKIHQLVSGST---------RLRNDDVLC-TRIITMYAMCGSPDDSRFVFDALRSKN 150
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTY 315
+ WN +I+ Y++N +E L F +M+ T + PD + + ACA ++ + G +
Sbjct: 151 LFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVH 210
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
LV+K G D+ V NALV+ Y G + D+ F + ++VSWN++I F+ +
Sbjct: 211 GLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSE 270
Query: 376 KARSYFDQMIAV----GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
++ +M+ PD T +++L VC R +I VH + + R +
Sbjct: 271 ESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG-----VHGWAVKLRLDK 325
Query: 432 YA----CLVDVMSRAGQLQRACEIIRL 454
L+D+ S+ G + A I ++
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKM 352
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/527 (25%), Positives = 218/527 (41%), Gaps = 116/527 (22%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ + +++ G++ A +VF ++P VV+W ML+ Y S + +F M
Sbjct: 284 DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR 343
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEA--------------------------------- 118
V + ++++ C + M+ EA
Sbjct: 344 HSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDID 403
Query: 119 -----FNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM----------------- 156
F + +N N MI+ F + + A RLF M
Sbjct: 404 LSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 157 --PCPN--------------VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
C N V+ TV + + G + + LF +P ++ W
Sbjct: 462 VLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWAS 521
Query: 201 MINGLVENGLYEEAWELFGRM------PQKNVVAS------------------------- 229
MI+G E G EA LF M P ++ +A+
Sbjct: 522 MISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAG 581
Query: 230 --------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
+A++ + K G + A ++ ++ D S + +I+GY+Q+G ++ LF
Sbjct: 582 IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFR 641
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
MV +G D S+ A A G Q +A + K G ++ SV ++L+TMYSK G
Sbjct: 642 DMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFG 701
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
SI D AF Q + PD+++W +IA++AQH +A ++ M G +PD +TF+ +LS
Sbjct: 702 SIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
C G ++ES N MV DYGI P + HY C+VD + R+G+L+ A
Sbjct: 762 ACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREA 808
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 119/449 (26%), Positives = 200/449 (44%), Gaps = 76/449 (16%)
Query: 60 FDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAF 119
FD TK +++W Y +SG + LFD +P +VVS N M++G Q+ + +E+
Sbjct: 82 FDVFLTKSLLSW------YSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESL 135
Query: 120 NYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR--LFKEMPCPNVVS-----YTVMI 168
+F+ M E N SY ++IS C A + LF E+ C + + Y V+
Sbjct: 136 RFFSKMHFLGFEANEISYGSVISA-------CSALQAPLFSELVCCHTIKMGYFFYEVVE 188
Query: 169 DGYVKV-KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF--------- 218
+ V + A +F N W +I G + N Y ++LF
Sbjct: 189 SALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK 248
Query: 219 ---------------------GRMPQ--------KNVVASTAMITGFCKQGKVDEAWTLF 249
G++ Q ++V TA++ + K G + EA +F
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVF 308
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
+I + SW +M++GY ++ AL +F +M +G++ ++ S+ +AC +++
Sbjct: 309 SRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVC 368
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF---GQTSQPDIVSWNTIIA 366
+ Q +A V K GF D SV AL++MYSK G I SE F + +IV N +I
Sbjct: 369 EASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMIT 426
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV--CCRAGKIDESMNLFNLMVHDYG 424
+F+Q KA F +M+ G+R D + SLLSV C GK L + +V D
Sbjct: 427 SFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLT 486
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ + L + S+ G L+ + ++ +
Sbjct: 487 VG------SSLFTLYSKCGSLEESYKLFQ 509
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 170/409 (41%), Gaps = 67/409 (16%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D+ +S+ T Y G + S LF +P K+ W +M++G + L EA F+ M
Sbjct: 484 DLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEML 543
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMP-CPNVVSYTV-------------MIDGYV 172
+ + + ++ + +C + +P + YT+ +++ Y
Sbjct: 544 DDGTSPDESTLAAVLT---VCSSH---PSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYS 597
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV----- 227
K G + AR ++D +P + VS + +I+G ++GL ++ + LF M
Sbjct: 598 KC---GSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFA 654
Query: 228 ----------------------------------ASTAMITGFCKQGKVDEAWTLFQQIR 253
++++T + K G +D+ F QI
Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQIN 714
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR- 312
D+ +W +I YAQ+G+ EAL +++ M G +PD + FV + +AC+ L+++
Sbjct: 715 GPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYF 774
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQH 371
++V +G + + +V + G + ++E +PD + W T++AA H
Sbjct: 775 HLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIH 834
Query: 372 VLYYKARSYFDQMIAVGVRP-DGITFLSLLSVCCRAGKIDESMNLFNLM 419
+ + A+ + P D ++SL ++ G+ DE LM
Sbjct: 835 GEVELGKVAAKK--AIELEPSDAGAYISLSNILAEVGEWDEVEETRKLM 881
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 201/452 (44%), Gaps = 44/452 (9%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
I+A+ + GN A ++F + D+V+WN+++ A S P + LF +MP
Sbjct: 257 ISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQ 316
Query: 104 AM---VAGCVQNDMLDEAFNYFAAMPERNAASY-----NAMISGFIKFGRLCDAQRLFKE 155
V G L M +N NA+I + K G L D++ F
Sbjct: 317 GTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDY 376
Query: 156 MPCPNVVSYTVMIDGYVKVKEG----------------------------GGIARARALF 187
+ N+V + ++ GY K+G + + L
Sbjct: 377 IRDKNIVCWNALLSGYAN-KDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLH 435
Query: 188 DAMPR----RNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITG-FCKQGKV 242
+ R N+ + ++ +N L +A L V ++ G + ++G+
Sbjct: 436 SVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQY 495
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
E+ L + D SWNI I +++ EE + LF M+++ ++PD FVS+ + C
Sbjct: 496 HESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLC 555
Query: 303 ASLALLDQGRQTYALVIKHGFD-SDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
+ L L G + L+ K F +D V N L+ MY KCGSI F +T + ++++W
Sbjct: 556 SKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITW 615
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
+I+ H +A F + +++G +PD ++F+S+L+ C G + E M LF M
Sbjct: 616 TALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-K 674
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
DYG+ P +HY C VD+++R G L+ A +IR
Sbjct: 675 DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIR 706
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/471 (22%), Positives = 216/471 (45%), Gaps = 66/471 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF-DAM 94
D + + + R + A QVF+ MP K + TWN M++ H GF + F + +
Sbjct: 148 DAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELV 207
Query: 95 PMKNVVSWNAMVA-----GCVQNDMLDEAFNYFAAMPERNA--ASYNAMISGFIKFGRLC 147
M ++ ++ + CV++ + + + A + + N++IS + K G
Sbjct: 208 RMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTH 267
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVM-- 201
A+R+F++ ++VS+ +I K + +A LF +MP N+ ++ +
Sbjct: 268 MAERMFQDAGSWDIVSWNAIICATAKSENP---LKALKLFVSMPEHGFSPNQGTYVSVLG 324
Query: 202 INGLVENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
++ LV+ L ++ G + + +V A+I + K G ++++ F IR ++I
Sbjct: 325 VSSLVQ--LLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNI 382
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
WN +++GYA N G L+LF QM++ G +P + F + +C L +Q +++
Sbjct: 383 VCWNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL----QQLHSV 437
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSEL----AFGQTS------------------- 354
+++ G++ + V ++L+ Y+K + D+ L A G TS
Sbjct: 438 IVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHE 497
Query: 355 ---------QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
QPD VSWN IAA ++ + + F M+ +RPD TF+S+LS+C +
Sbjct: 498 SVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSK 557
Query: 406 AGKIDESMNLFNLMVH-DYGIPPRSEHYAC--LVDVMSRAGQLQRACEIIR 453
+ ++ L+ D+ ++ + C L+D+ + G ++ ++
Sbjct: 558 LCDLTLGSSIHGLITKTDFSC---ADTFVCNVLIDMYGKCGSIRSVMKVFE 605
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 128/273 (46%), Gaps = 4/273 (1%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVK---VKEGGGIARARALFDAM 190
N +IS + K G + A ++F +MP N VS+ +I GY K V + G+ F +
Sbjct: 53 NNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYL 112
Query: 191 PRRNEVSWTVMINGL-VENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLF 249
P ++ VS + L V G L + + T ++ + + ++ A +F
Sbjct: 113 PNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVF 172
Query: 250 QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
+ + + + +WN M++ G +E + F ++VR G + F+ + + + LD
Sbjct: 173 EDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLD 232
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFA 369
+Q + K G D ++SV N+L++ Y KCG+ +E F DIVSWN II A A
Sbjct: 233 ISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATA 292
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ KA F M G P+ T++S+L V
Sbjct: 293 KSENPLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 86/176 (48%), Gaps = 3/176 (1%)
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR 285
V +I+ + K G+V A +F Q+ R+ S+N +I GY++ G ++A +FS+M
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 286 TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG-FDSDLSVNNALVTMYSKCGSIV 344
G P+ VS +CASL + G Q + L +K+G F +D V L+ +Y + +
Sbjct: 109 FGYLPNQST-VSGLLSCASLDV-RAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLE 166
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
+E F + +WN +++ + +F +++ +G +FL +L
Sbjct: 167 MAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVL 222
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 97/239 (40%), Gaps = 25/239 (10%)
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
PT VV N + Y G S L + + VSWN +A C ++D +E F
Sbjct: 476 PTS-VVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFK 534
Query: 124 AMPERNAASYNAMISGFIKF-GRLCDAQR--------LFKEMPCPNVVSYTVMIDGYVKV 174
M + N + +LCD + C + V+ID Y K
Sbjct: 535 HMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKC 594
Query: 175 KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------GRMPQKNVVA 228
G I +F+ +N ++WT +I+ L +G +EA E F G P + V+
Sbjct: 595 ---GSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDR--VS 649
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQM 283
+++T G V E LFQ+++ ++ + + A+NG +EA +L +M
Sbjct: 650 FISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREM 708
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 8/142 (5%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
L+ FS D + N+ I + + G+I + +VF++ K+++TW ++++ G+ Q
Sbjct: 570 LITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQ 629
Query: 86 HSRALFD---AMPMK-NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMI 137
+ F ++ K + VS+ +++ C M+ E F M E Y +
Sbjct: 630 EALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAV 689
Query: 138 SGFIKFGRLCDAQRLFKEMPCP 159
+ G L +A+ L +EMP P
Sbjct: 690 DLLARNGYLKEAEHLIREMPFP 711
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 181/374 (48%), Gaps = 28/374 (7%)
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGF 140
S F +++ +FD + WN M+ G +D PER+ Y
Sbjct: 62 SDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDE-----------PERSLLLY------- 103
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV-SWT 199
QR+ N ++ ++ + + A + N+V +
Sbjct: 104 ---------QRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVN 154
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
+IN G ++ A LF R+P+ + V+ ++I G+ K GK+D A TLF+++ ++ S
Sbjct: 155 SLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAIS 214
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
W MI+GY Q +EAL LF +M + ++PD++ + +ACA L L+QG+ ++ +
Sbjct: 215 WTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLN 274
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
K D + L+ MY+KCG + ++ F + + +W +I+ +A H +A S
Sbjct: 275 KTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAIS 334
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F +M +G++P+ ITF ++L+ C G ++E +F M DY + P EHY C+VD++
Sbjct: 335 KFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLL 394
Query: 440 SRAGQLQRACEIIR 453
RAG L A I+
Sbjct: 395 GRAGLLDEAKRFIQ 408
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 54/366 (14%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNVVSWNAMVAGCVQ 111
A+ VFD D WN M+ + S P+ S L+ M N ++ +++ C
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 112 NDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVM 167
+E A + E + + N++I+ + G A LF +P P+ VS+ +
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV- 226
I GYVK G + A LF M +N +SWT MI+G V+ + +EA +LF M +V
Sbjct: 188 IKGYVK---AGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 227 --------------------------------------VASTAMITGFCKQGKVDEAWTL 248
V +I + K G+++EA +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F+ I+ + + +W +I+GYA +G G EA++ F +M + G++P+ + F ++ TAC+ L+
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 309 DQGRQT-YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS--QPDIVSWNTII 365
++G+ Y++ + + +V + + G ++D F Q +P+ V W ++
Sbjct: 365 EEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAG-LLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 366 AAFAQH 371
A H
Sbjct: 424 KACRIH 429
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 137/302 (45%), Gaps = 25/302 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DVY N I +++ GN A +FD++P D V+WNS++ Y +G + LF M
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR 151
KN +SW M++G VQ DM EA F M E + S +S + G L +
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 152 LFKEMPCPNV----VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
+ + + V V+ID Y K G + A +F + +++ +WT +I+G
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKC---GEMEEALEVFKNIKKKSVQAWTALISGYAY 325
Query: 208 NGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD------I 257
+G EA F M + NV+ TA++T G V+E +F + RD I
Sbjct: 326 HGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSME-RDYNLKPTI 384
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+ ++ + G +EA +M ++P+ +I+ +L AC ++ G + +
Sbjct: 385 EHYGCIVDLLGRAGLLDEAKRFIQEM---PLKPNAVIWGALLKACRIHKNIELGEEIGEI 441
Query: 318 VI 319
+I
Sbjct: 442 LI 443
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 226/530 (42%), Gaps = 118/530 (22%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM------ 94
N I+ + G++++AR +FD MP + VVTW ++ Y + + LF M
Sbjct: 83 NTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 95 PMKNVVSWNAMVAGC----------------------------VQNDML---------DE 117
+ + V++ ++ GC V N +L D
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMIDGYVK 173
A F +PE+++ ++N +I+G+ K G ++ LF +M P+ +++ ++ V
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 174 VKE------------GGGIAR--------------------ARALFDAMPRRNEVSWTVM 201
+ + G +R R LFD MP + VS+ V+
Sbjct: 263 LHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 202 INGLVENGLYEEAWELF------------------------------GRMPQKNVVASTA 231
I+ + YE + F GR + +TA
Sbjct: 323 ISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA 382
Query: 232 ---------MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
++ + K +EA +F+ + R SW +I+GY Q G L LF++
Sbjct: 383 DSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTK 442
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M + ++ D F ++ A AS A L G+Q +A +I+ G ++ + LV MY+KCGS
Sbjct: 443 MRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGS 502
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
I D+ F + + VSWN +I+A A + A F +MI G++PD ++ L +L+
Sbjct: 503 IKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTA 562
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C G +++ F M YGI P+ +HYAC++D++ R G+ A +++
Sbjct: 563 CSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 113/416 (27%), Positives = 192/416 (46%), Gaps = 54/416 (12%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D R+N + R G ++AAR+V+D+MP K+ V+ N+M++ + +G +R LFDAMP
Sbjct: 47 DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP 106
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA--QRLF 153
+ VV+W ++ +N DEAF F M ++ + ++ DA Q
Sbjct: 107 DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAV 166
Query: 154 KEMPC----------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
++ P + V++ Y +V+ + A LF+ +P ++ V++ +I
Sbjct: 167 GQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR---LDLACVLFEEIPEKDSVTFNTLIT 223
Query: 204 GLVENGLYEEAWELFGRMPQ--------------KNVVA-----------STAMITGF-- 236
G ++GLY E+ LF +M Q K VV + ++ TGF
Sbjct: 224 GYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSR 283
Query: 237 ------------CKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
K +V E LF ++ D S+N++I+ Y+Q + E +L+ F +M
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ 343
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
G + F ++ + A+L+ L GRQ + + DS L V N+LV MY+KC
Sbjct: 344 CMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFE 403
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
++EL F Q VSW +I+ + Q L+ F +M +R D TF ++L
Sbjct: 404 EAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVL 459
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 156/312 (50%), Gaps = 46/312 (14%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N ++ ++ G++ A++++ EMP N VS MI G+VK G ++ AR LFDAMP R
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT---GDVSSARDLFDAMPDR 108
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRM-------------------------PQKNV-- 226
V+WT+++ N ++EA++LF +M PQ V
Sbjct: 109 TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQ 168
Query: 227 ----------------VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQN 270
S ++ +C+ ++D A LF++I +D ++N +ITGY ++
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
G E+++LF +M ++G QP D F + A L G+Q +AL + GF D SV
Sbjct: 229 GLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVG 288
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
N ++ YSK ++++ + F + + D VS+N +I++++Q Y + +F +M +G
Sbjct: 289 NQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFD 348
Query: 391 PDGITFLSLLSV 402
F ++LS+
Sbjct: 349 RRNFPFATMLSI 360
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 174/394 (44%), Gaps = 54/394 (13%)
Query: 65 TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAA 124
++D N +L Y +R LFD MP + VS+N +++ Q D + + ++F
Sbjct: 282 SRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFRE 341
Query: 125 MP----ERNAASYNAMIS-----GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK 175
M +R + M+S ++ GR Q L V + ++D Y K +
Sbjct: 342 MQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNS-LVDMYAKCE 400
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ------------ 223
A +F ++P+R VSWT +I+G V+ GL+ +LF +M
Sbjct: 401 M---FEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFAT 457
Query: 224 ---------------------------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+NV + + ++ + K G + +A +F+++ R+
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 517
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY- 315
SWN +I+ +A NG GE A+ F++M+ +G+QPD + + + TAC+ ++QG + +
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQ 577
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLY 374
A+ +G ++ + + G ++E + +PD + W++++ A H
Sbjct: 578 AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQ 637
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
A +++ ++ D ++S+ ++ AG+
Sbjct: 638 SLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGE 671
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/438 (28%), Positives = 211/438 (48%), Gaps = 38/438 (8%)
Query: 43 NIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV-- 100
+ AFS +I A +F+ + ++ +N+M+ Y S P+ + ++F+ + K +
Sbjct: 65 KLLAFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLD 124
Query: 101 --SWNAMVAGC-----------VQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC 147
S+ + C + L F F + NA+I + G++
Sbjct: 125 RFSFITTLKSCSRELCVSIGEGLHGIALRSGFMVFTDLR-------NALIHFYCVCGKIS 177
Query: 148 DAQRLFKEMP-CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV--------SW 198
DA+++F EMP + V+++ +++GY++V + A A LF M R++EV S+
Sbjct: 178 DARKVFDEMPQSVDAVTFSTLMNGYLQVSKK---ALALDLFRIM-RKSEVVVNVSTLLSF 233
Query: 199 TVMINGLVENGLYEEAWELFGRMP-QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
I+ L + E A L ++ ++ TA+I + K G + A +F +D+
Sbjct: 234 LSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDV 293
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+WN MI YA+ G EE + L QM M+P+ FV L ++CA GR L
Sbjct: 294 VTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADL 353
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+ + D + ALV MY+K G + + F + D+ SW +I+ + H L +A
Sbjct: 354 LEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREA 413
Query: 378 RSYFDQMIA--VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
+ F++M VRP+ ITFL +L+ C G + E + F MV Y P+ EHY C+
Sbjct: 414 VTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCV 473
Query: 436 VDVMSRAGQLQRACEIIR 453
VD++ RAGQL+ A E+IR
Sbjct: 474 VDLLGRAGQLEEAYELIR 491
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 133/314 (42%), Gaps = 50/314 (15%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLT 76
S A H L + K D++ I + + G I++AR++FD KDVVTWN M+
Sbjct: 244 SGAESAHVLCI--KIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMID 301
Query: 77 AYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQN----------DMLDEAFNYF 122
Y +G + L M + N ++ +++ C + D+L+E
Sbjct: 302 QYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEE----- 356
Query: 123 AAMPER---NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGG 179
ER +A A++ + K G L A +F M +V S+T MI GY G
Sbjct: 357 ----ERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGY----GAHG 408
Query: 180 IAR-ARALFDAMP------RRNEVSWTVMINGLVENGLYEEAWELFGRMPQK-----NVV 227
+AR A LF+ M R NE+++ V++N GL E F RM + V
Sbjct: 409 LAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVE 468
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIR-CRDIASWNIMITG---YAQNGRGEEALNLFSQM 283
++ + G+++EA+ L + + D +W ++ Y GE + ++M
Sbjct: 469 HYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEM 528
Query: 284 VRTGMQPDDLIFVS 297
T P D I ++
Sbjct: 529 GET--HPADAILLA 540
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 191/409 (46%), Gaps = 45/409 (11%)
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFG 144
L D K+ V+ + + V + EAF F + R ++Y+A++ I+
Sbjct: 78 LDDTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLK 137
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK-EGGGIARARALFDAMPRRNEVSWTVMIN 203
+ +R++ M M++ + + + G I AR LFD +P RN S+ +I+
Sbjct: 138 SIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIIS 197
Query: 204 GLVENGLYEEAWELFGRMPQK--------------------------------------- 224
G V G Y EA+ELF M ++
Sbjct: 198 GFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVD 257
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
N S +I + K G +++A F+ + + +WN +I GYA +G EEAL L M
Sbjct: 258 NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMR 317
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+G+ D + LA L+ +Q +A +I++GF+S++ N ALV YSK G +
Sbjct: 318 DSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVD 377
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
+ F + + +I+SWN ++ +A H A F++MIA V P+ +TFL++LS C
Sbjct: 378 TARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA 437
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+G ++ +F M +GI PR+ HYAC+++++ R G L A IR
Sbjct: 438 YSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIR 486
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 160/375 (42%), Gaps = 61/375 (16%)
Query: 28 FAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGF 83
F S+YD + A R +I ++V+ M + + N +L + G
Sbjct: 119 FKVGVSTYDAL-----VEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGM 173
Query: 84 PQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISG 139
+R LFD +P +N+ S+ ++++G V EAF F M E ++ M+
Sbjct: 174 IIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRA 233
Query: 140 FIKFGRLCDAQRL----FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
G + ++L K N +ID Y K G I AR F+ MP +
Sbjct: 234 SAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKC---GDIEDARCAFECMPEKTT 290
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMP--------------------------------- 222
V+W +I G +G EEA L M
Sbjct: 291 VAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHAS 350
Query: 223 ------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+ +VA+TA++ + K G+VD A +F ++ ++I SWN ++ GYA +GRG +A
Sbjct: 351 LIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDA 410
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALVT 335
+ LF +M+ + P+ + F+++ +ACA L +QG + + ++ HG ++
Sbjct: 411 VKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIE 470
Query: 336 MYSKCGSIVDSELAF 350
+ + G ++D +AF
Sbjct: 471 LLGRDG-LLDEAIAF 484
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 25/257 (9%)
Query: 74 MLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASY 133
++ Y G + +R F+ MP K V+WN ++AG + +EA M + +
Sbjct: 265 LIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSID 324
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPC--------PNVVSYTVMIDGYVKVKEGGGIARARA 185
+S I+ L K+ +V+ T ++D Y K G + AR
Sbjct: 325 QFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSK---WGRVDTARY 381
Query: 186 LFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGK 241
+FD +PR+N +SW ++ G +G +A +LF +M NV V A+++ G
Sbjct: 382 VFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGL 441
Query: 242 VDEAWTLF------QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
++ W +F I+ R + + MI ++G +EA+ R ++ ++
Sbjct: 442 SEQGWEIFLSMSEVHGIKPRAM-HYACMIELLGRDGLLDEAIAFIR---RAPLKTTVNMW 497
Query: 296 VSLFTACASLALLDQGR 312
+L AC L+ GR
Sbjct: 498 AALLNACRMQENLELGR 514
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
SI++ I+ K + H L+ F S V L + +S+ G + AR VFDK+
Sbjct: 329 SIMIRISTKLAKLELTKQAHASLI-RNGFESEIVANTAL-VDFYSKWGRVDTARYVFDKL 386
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAF 119
P K++++WN+++ Y + G + LF+ M NV V++ A+++ C + + ++ +
Sbjct: 387 PRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGW 446
Query: 120 NYFAAMPERN-----AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV 174
F +M E + A Y MI + G L +A + P V+ + ++
Sbjct: 447 EIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRM 506
Query: 175 KEGGGIAR--ARALFDAMPRR 193
+E + R A L+ P +
Sbjct: 507 QENLELGRVVAEKLYGMGPEK 527
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/406 (27%), Positives = 193/406 (47%), Gaps = 63/406 (15%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQ 111
N+ AR++FD +N ++ AY+ P S L+ N++S++ +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLY------NLLSFDGLRPS--- 81
Query: 112 NDMLDEAFNYFAAMPERNAAS--YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMID 169
FN+ A +++ + S F + G D+ T +I
Sbjct: 82 ----HHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDS------------FCCTTLIT 125
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS 229
Y K+ G + AR +FD M +R+ W
Sbjct: 126 AYAKL---GALCCARRVFDEMSKRDVPVWN------------------------------ 152
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TGM 288
AMITG+ ++G + A LF + +++ SW +I+G++QNG EAL +F M + +
Sbjct: 153 -AMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSV 211
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL 348
+P+ + VS+ ACA+L L+ GR+ ++GF ++ V NA + MYSKCG I ++
Sbjct: 212 KPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKR 271
Query: 349 AFGQT-SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
F + +Q ++ SWN++I + A H + +A + F QM+ G +PD +TF+ LL C G
Sbjct: 272 LFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 331
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ + LF M + I P+ EHY C++D++ R G+LQ A ++I+
Sbjct: 332 MVVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIK 377
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 138/302 (45%), Gaps = 29/302 (9%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
H+ F F F S D + I A+++ G + AR+VFD+M +DV WN+M+T Y
Sbjct: 105 HSQF---FRSGFES-DSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQR 160
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN-----A 135
G + + LFD+MP KNV SW +++G QN EA F M + + N +
Sbjct: 161 RGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVS 220
Query: 136 MISGFIKFGRLCDAQRL----FKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
++ G L +RL + N+ I+ Y K G I A+ LF+ +
Sbjct: 221 VLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKC---GMIDVAKRLFEELG 277
Query: 192 -RRNEVSWTVMINGLVENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAW 246
+RN SW MI L +G ++EA LF +M + + V ++ G V +
Sbjct: 278 NQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQ 337
Query: 247 TLFQQIR-----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
LF+ + + + MI + G+ +EA +L M M+PD +++ +L A
Sbjct: 338 ELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM---PMKPDAVVWGTLLGA 394
Query: 302 CA 303
C+
Sbjct: 395 CS 396
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 168 bits (426), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/329 (31%), Positives = 178/329 (54%), Gaps = 18/329 (5%)
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
M S F FG A ++F+ + ++V++ MI Y + K G A +++ M
Sbjct: 332 MYSSFEDFGA---AHKVFESLEEKDLVTWNTMISSYNQAKLG---KSAMSVYKRMHIIGV 385
Query: 196 VSWTVMINGLVENGLYEEAWEL-------FGRMPQKNVVASTAMITGFCKQGKVDEAWTL 248
L+ L + E+ FG + + S A+I+ + K G++++A L
Sbjct: 386 KPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEI--SNALISAYSKNGQIEKADLL 443
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ--PDDLIFVSLFTACASLA 306
F++ +++ SWN +I+G+ NG E L FS ++ + ++ PD +L + C S +
Sbjct: 444 FERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTS 503
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
L G QT+A V++HG + + NAL+ MYS+CG+I +S F Q S+ D+VSWN++I+
Sbjct: 504 SLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLIS 563
Query: 367 AFAQHVLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
A+++H A + + M G V PD TF ++LS C AG ++E + +FN MV +G+
Sbjct: 564 AYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGV 623
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEIIRL 454
+H++CLVD++ RAG L A ++++
Sbjct: 624 IRNVDHFSCLVDLLGRAGHLDEAESLVKI 652
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 213/460 (46%), Gaps = 56/460 (12%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
+N ++ + R GN+ + ++ FD++ DV +W ++L+A + G +++ +FD MP ++
Sbjct: 95 SNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDD 154
Query: 100 VS-WNAMVAGCVQNDMLDEAFNYFAAMPERN----------------------------- 129
V+ WNAM+ GC ++ + + F M +
Sbjct: 155 VAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSL 214
Query: 130 ---------AASYNAMISGFIKFGRLCDAQRLFKE--MPCPNVVSYTVMIDGYVKVKEGG 178
++ NA+I+ + + DA +F+E + + V++ V+IDG K
Sbjct: 215 VIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDE 274
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP-QKNVVASTAMITGFC 237
+ R + +A R ++++ ++ + + L + +K + S A +T +
Sbjct: 275 SLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYS 334
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
A +F+ + +D+ +WN MI+ Y Q G+ A++++ +M G++PD+ F S
Sbjct: 335 SFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGS 394
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
L L +L+ A +IK G S + ++NAL++ YSK G I ++L F ++ + +
Sbjct: 395 LLATSLDLDVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKN 451
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR--PDGITFLSLLSVCCRAGKIDESMNL 415
++SWN II+ F + ++ F ++ VR PD T +LLS+C + S +
Sbjct: 452 LISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSIC-----VSTSSLM 506
Query: 416 FNLMVHDY----GIPPRSEHYACLVDVMSRAGQLQRACEI 451
H Y G + L+++ S+ G +Q + E+
Sbjct: 507 LGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 180/366 (49%), Gaps = 35/366 (9%)
Query: 33 SSYDVYR--ANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRAL 90
+ Y+ Y +N + +S + AA +VF+ + KD+VTWN+M+++Y + + + ++
Sbjct: 317 TGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSV 376
Query: 91 FDAMPMKNV----VSWNAMVAGCVQNDMLD--EAFNYFAAMPERNAASYNAMISGFIKFG 144
+ M + V ++ +++A + D+L+ +A + + S NA+IS + K G
Sbjct: 377 YKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEIS-NALISAYSKNG 435
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG----GIAR--------ARALFDAMPR 192
++ A LF+ N++S+ +I G+ G G+ R R L DA
Sbjct: 436 QIEKADLLFERSLRKNLISWNAIISGFY---HNGFPFEGLERFSCLLESEVRILPDAYTL 492
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMPQ-KNVVASTAMITGFCKQGKVDEAWTLFQQ 251
+S V + L+ G A+ L R Q K + A+I + + G + + +F Q
Sbjct: 493 STLLSICVSTSSLML-GSQTHAYVL--RHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ 549
Query: 252 IRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQ 310
+ +D+ SWN +I+ Y+++G GE A+N + M G + PD F ++ +AC+ L+++
Sbjct: 550 MSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEE 609
Query: 311 GRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVS----WNTII 365
G + + ++V HG ++ + LV + + G + ++E + + S+ I S W +
Sbjct: 610 GLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAE-SLVKISEKTIGSRVDVWWALF 668
Query: 366 AAFAQH 371
+A A H
Sbjct: 669 SACAAH 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Query: 4 SIIVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKM 63
S ++SI + + TH ++ F + A +N+ +S+ G I + +VF++M
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINM--YSQCGTIQNSLEVFNQM 550
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP-----MKNVVSWNAMVAGCVQNDMLDEA 118
KDVV+WNS+++AY G +++ + M + + +++A+++ C +++E
Sbjct: 551 SEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Query: 119 FNYFAAMPE-----RNAASYNAMISGFIKFGRLCDAQRLFK 154
F +M E RN ++ ++ + G L +A+ L K
Sbjct: 611 LEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVK 651
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 261 NIMITGYAQNGRGEEALNLFSQMVR-TGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
N +TG ++G AL LF+ + R T ++PD T L G Q + I
Sbjct: 25 NRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAI 84
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII-AAFAQHVLYYKAR 378
+ G V+N L+++Y + G++ + F + +PD+ SW T++ A+F + Y A
Sbjct: 85 RSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEY-AF 143
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
FD+M R D + ++++ C +G + S+ LF M H G+
Sbjct: 144 EVFDKMPE---RDDVAIWNAMITGCKESGYHETSVELFREM-HKLGV 186
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 116/435 (26%), Positives = 198/435 (45%), Gaps = 82/435 (18%)
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAMP--ERNAASYNAMISGFIKFGRLC--DAQRLFK 154
VV +++ +Q++ LD A + F +P +RN S+N ++SG+ K C D L+
Sbjct: 39 VVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYN 98
Query: 155 EM--PCPNVVSYT-----------------VMIDGYVKVKEG------------------ 177
M C V S+ ++I G + +K G
Sbjct: 99 RMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHG-LAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------- 224
G + A+ +FD +P RN V W V++ G ++ E + LF M
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLV 217
Query: 225 ----NVVAS-----------------------TAMITGFCKQGKVDEAWTLFQQIRCRDI 257
NV A ++I + K +D A LF+ R++
Sbjct: 218 KACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNV 277
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
W +I+G+A+ R EA +LF QM+R + P+ ++ +C+SL L G+ +
Sbjct: 278 VMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGY 337
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+I++G + D + + MY++CG+I + F + +++SW+++I AF + L+ +A
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEA 397
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
F +M + V P+ +TF+SLLS C +G + E F M DYG+ P EHYAC+VD
Sbjct: 398 LDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVD 457
Query: 438 VMSRAGQLQRACEII 452
++ RAG++ A I
Sbjct: 458 LLGRAGEIGEAKSFI 472
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 160/365 (43%), Gaps = 42/365 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYW-HSGFPQHSRAL---- 90
D Y A + +++ G + +A++VFD++P ++ V W ++ Y +S P+ R
Sbjct: 143 DDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMR 202
Query: 91 -----FDAMPMKNVVS-----WNAMVAGCVQNDMLDEAF----NYFAAMPERNAASYNAM 136
DA+ + +V + V CV + +F +Y A ++
Sbjct: 203 DTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQA----------SI 252
Query: 137 ISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR--- 193
I ++K L +A++LF+ NVV +T +I G+ K + A LF M R
Sbjct: 253 IDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERA---VEAFDLFRQMLRESIL 309
Query: 194 -NEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTL 248
N+ + ++ G + G M + + V T+ I + + G + A T+
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F + R++ SW+ MI + NG EEAL+ F +M + P+ + FVSL +AC+ +
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Query: 309 DQG-RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIA 366
+G +Q ++ +G + +V + + G I +++ +P +W +++
Sbjct: 430 KEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 367 AFAQH 371
A H
Sbjct: 490 ACRIH 494
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 115/242 (47%), Gaps = 19/242 (7%)
Query: 180 IARARALFDAMPRRNEVSWTVMING-LVENGLYEEAWELFGRMPQKNVVASTAMITGFCK 238
+ RARAL + + ++ T ++ ++ +G +E VV +++ + +
Sbjct: 4 VNRARALLTILSQAKTLNHTQQVHAKVIIHGFEDE------------VVLGSSLTNAYIQ 51
Query: 239 QGKVDEAWTLFQQIRC--RDIASWNIMITGYAQNGRG--EEALNLFSQMVRTGMQPDDLI 294
++D A + F +I C R+ SWN +++GY+++ + L L+++M R D
Sbjct: 52 SNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFN 111
Query: 295 FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
V AC L LL+ G + L +K+G D D V +LV MY++ G++ ++ F +
Sbjct: 112 LVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIP 171
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR--AGKIDES 412
+ V W ++ + ++ + F M G+ D +T + L+ C AGK+ +
Sbjct: 172 VRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKC 231
Query: 413 MN 414
++
Sbjct: 232 VH 233
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 195/417 (46%), Gaps = 15/417 (3%)
Query: 52 NITAARQVFDKMPTKDVVTWNSM----LTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVA 107
+I R V ++ +D+ +S+ + AY +R +FD +P +NV+ N M+
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 108 GCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKF----GRLCDAQRLFKEMPCPNVVS 163
V N E F M N + +K G + +++ + S
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSS 173
Query: 164 YTVMIDGYVKV-KEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP 222
+ +G V + + G ++ AR + D M RR+ VSW ++ G +N +++A E+ M
Sbjct: 174 TLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 223 QKNV------VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
+ +AS V +F ++ + + SWN+MI Y +N EA
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEA 293
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+ L+S+M G +PD + S+ AC + L G++ + + + +L + NAL+ M
Sbjct: 294 VELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDM 353
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y+KCG + + F D+VSW +I+A+ A + F ++ G+ PD I F
Sbjct: 354 YAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAF 413
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
++ L+ C AG ++E + F LM Y I PR EH AC+VD++ RAG+++ A I+
Sbjct: 414 VTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQ 470
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 195/457 (42%), Gaps = 84/457 (18%)
Query: 46 AFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VS 101
A++ ++ +AR+VFD++P ++V+ N M+ +Y ++GF +F M NV +
Sbjct: 83 AYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYT 142
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERNAASY----NAMISGFIKFGRLCDAQRLFKEMP 157
+ ++ C + + + + +S N ++S + K G L +A+ + EM
Sbjct: 143 FPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMS 202
Query: 158 CPNVVSYTVMIDGY------------------VKVKEGGG----------------IARA 183
+VVS+ ++ GY VK+ G +
Sbjct: 203 RRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYV 262
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------------- 224
+ +F M +++ VSW VMI ++N + EA EL+ RM
Sbjct: 263 KDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDT 322
Query: 225 --------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
N++ A+I + K G +++A +F+ ++ RD+ SW MI
Sbjct: 323 SALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMI 382
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH-GF 323
+ Y +GRG +A+ LFS++ +G+ PD + FV+ AC+ LL++GR + L+ H
Sbjct: 383 SAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKI 442
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLYYKARSYFD 382
L +V + + G + ++ S +P+ W ++ A H D
Sbjct: 443 TPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAAD 502
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
++ + G L L ++ +AG+ +E N+ N+M
Sbjct: 503 KLFQLAPEQSGYYVL-LSNIYAKAGRWEEVTNIRNIM 538
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 139/324 (42%), Gaps = 62/324 (19%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH------------- 80
S ++ N ++ + + G ++ AR V D+M +DVV+WNS++ Y
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCRE 231
Query: 81 --------------SGFPQHS----------RALFDAMPMKNVVSWNAMVAGCVQNDMLD 116
S P S + +F M K++VSWN M+ ++N M
Sbjct: 232 MESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 117 EAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLF----KEMPCPNVVSYTVMI 168
EA ++ M E +A S +++ L +++ ++ PN++ +I
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 169 DGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA 228
D Y K G + +AR +F+ M R+ VSWT MI+ +G +A LF ++ +V
Sbjct: 352 DMYAKC---GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVP 408
Query: 229 -STAMITGF--CKQ-GKVDEAWTLFQ------QIRCRDIASWNIMITGYAQNGRGEEALN 278
S A +T C G ++E + F+ +I R + M+ + G+ +EA
Sbjct: 409 DSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPR-LEHLACMVDLLGRAGKVKEAYR 467
Query: 279 LFSQMVRTGMQPDDLIFVSLFTAC 302
M M+P++ ++ +L AC
Sbjct: 468 FIQDM---SMEPNERVWGALLGAC 488
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 124/213 (58%)
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
G + A LF+ ++ RD+ WN MI+GY Q G +E L ++ M + + PD F S+F
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVF 216
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
AC++L L+ G++ +A++IK S++ V++ALV MY KC S D F Q S +++
Sbjct: 217 RACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+W ++I+ + H + F++M G RP+ +TFL +L+ C G +D+ F M
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSM 336
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
DYGI P +HYA +VD + RAG+LQ A E +
Sbjct: 337 KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFV 369
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SW 102
++ +G++ A +F + +D++ WN+M++ Y G Q ++ M +V ++
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPC 158
++ C D L+ A M +R N +A++ + K D R+F ++
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEA 214
NV+++T +I GY G ++ F+ M R N V++ V++ GL ++
Sbjct: 273 RNVITWTSLISGY---GYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKG 329
Query: 215 WELFGRMPQKNVVAS-----TAMITGFCKQGKVDEAWTLFQQIRCRD 256
WE F M + + AM+ + G++ EA+ + C++
Sbjct: 330 WEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKE 376
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 103/251 (41%), Gaps = 47/251 (18%)
Query: 168 IDGYVKVKE------GGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM 221
++ Y+KVK G + A LF ++ R+ + W MI+G V+ GL +E ++ M
Sbjct: 141 LNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDM 200
Query: 222 PQK---------------------------------------NVVASTAMITGFCKQGKV 242
Q N++ +A++ + K
Sbjct: 201 RQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSF 260
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ +F Q+ R++ +W +I+GY +G+ E L F +M G +P+ + F+ + TAC
Sbjct: 261 SDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
Query: 303 ASLALLDQG-RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVS 360
L+D+G Y++ +G + + A+V + G + ++ E +
Sbjct: 321 NHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPV 380
Query: 361 WNTIIAAFAQH 371
W +++ A H
Sbjct: 381 WGSLLGACRIH 391
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 110/248 (44%), Gaps = 25/248 (10%)
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEA-FNYFAAMPER--- 128
+L Y SG Q + LF ++ +++++ WNAM++G VQ + E F Y+ R
Sbjct: 148 KLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVP 207
Query: 129 NAASYNAMISGFIKFGRLCDAQR----LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARAR 184
+ ++ ++ RL +R + K N++ + ++D Y K +
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKC---SSFSDGH 264
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQG 240
+FD + RN ++WT +I+G +G E + F +M ++ N V ++T G
Sbjct: 265 RVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGG 324
Query: 241 KVDEAWTLFQQIRCRDIA------SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
VD+ W F ++ RD + M+ + GR +EA ++++ + +
Sbjct: 325 LVDKGWEHFYSMK-RDYGIEPEGQHYAAMVDTLGRAGRLQEAYEF---VMKSPCKEHPPV 380
Query: 295 FVSLFTAC 302
+ SL AC
Sbjct: 381 WGSLLGAC 388
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 85/195 (43%), Gaps = 20/195 (10%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSW 102
+ + + + +VFD++ T++V+TW S+++ Y + G F+ M + N V++
Sbjct: 254 YFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTF 313
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGRLCDAQRLFKEMP 157
++ C ++D+ + +F +M E Y AM+ + GRL +A + P
Sbjct: 314 LVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSP 373
Query: 158 C---PNV---VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
C P V + I G VK+ E A F + N ++ V NG GL
Sbjct: 374 CKEHPPVWGSLLGACRIHGNVKLLE-----LAATKFLELDPTNGGNYVVFANGYASCGLR 428
Query: 212 EEAWELFGRMPQKNV 226
E A ++ +M V
Sbjct: 429 EAASKVRRKMENAGV 443
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 71/172 (41%), Gaps = 3/172 (1%)
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
FQ R + + G GR +EA+ L + +G+Q + + L C
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEY 124
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+G++ +A + GF + + L+ +Y+ G + + + F D++ WN +I+ +
Sbjct: 125 TKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGY 184
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
Q L + + M + PD TF S+ C +++ +M+
Sbjct: 185 VQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMI 236
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 170/325 (52%), Gaps = 7/325 (2%)
Query: 136 MISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK-EGGGIARARALFDAMPRRN 194
++ + G +C A+++F EM P + + + GYV+ + + + + D R +
Sbjct: 49 LLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPD 108
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQ 250
E ++ ++ + + G + + L + + + +T ++ + K G++ A LF+
Sbjct: 109 EFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFE 168
Query: 251 QIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
++ +D+ +WN + Q G AL F++M +Q D VS+ +AC L L+
Sbjct: 169 SMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEI 228
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G + Y K D ++ V NA + M+ KCG+ + + F + Q ++VSW+T+I +A
Sbjct: 229 GEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAM 288
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV--HDYGIPPR 428
+ +A + F M G+RP+ +TFL +LS C AG ++E F+LMV +D + PR
Sbjct: 289 NGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPR 348
Query: 429 SEHYACLVDVMSRAGQLQRACEIIR 453
EHYAC+VD++ R+G L+ A E I+
Sbjct: 349 KEHYACMVDLLGRSGLLEEAYEFIK 373
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 171/396 (43%), Gaps = 63/396 (15%)
Query: 72 NSMLTAYWHS----GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM-- 125
NS+LT + G ++R +FD M + WN + G V+N + E+ + M
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRD 102
Query: 126 ----PERNAASY---------------------------------NAMISGFIKFGRLCD 148
P+ + ++ ++KFG L
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSS 162
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRRNEVSWTVMING 204
A+ LF+ M ++V++ + V+ G A A F+ M + + + M++
Sbjct: 163 AEFLFESMQVKDLVAWNAFLAVCVQT---GNSAIALEYFNKMCADAVQFDSFTVVSMLSA 219
Query: 205 LVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
+ G E E++ R ++ N++ A + K G + A LF++++ R++ SW
Sbjct: 220 CGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSW 279
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+ MI GYA NG EAL LF+ M G++P+ + F+ + +AC+ L+++G++ ++L+++
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
Query: 321 HGFDSDLSVNN----ALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
D +L +V + + G + ++ E +PD W ++ A A H
Sbjct: 340 SN-DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMI 398
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLS-VCCRAGKID 410
+ D ++ PD ++ LLS + AGK D
Sbjct: 399 LGQKVADVLVETA--PDIGSYHVLLSNIYAAAGKWD 432
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
T ++ G + A +F ++ I WN + GY +N E+L L+ +M G++
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVR 106
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
PD+ + + A + L G +A V+K+GF V LV MY K G + +E
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F D+V+WN +A Q A YF++M A V+ D T +S+LS C + G +
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSL 226
Query: 410 DESMNLFN 417
+ +++
Sbjct: 227 EIGEEIYD 234
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 27/255 (10%)
Query: 69 VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM--- 125
+ ++ Y G + LF++M +K++V+WNA +A CVQ A YF M
Sbjct: 145 IVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 126 -PERNAASYNAMISGFIKFGRLCDAQRLF-----KEMPCPNVVSYTVMIDGYVKVKEGGG 179
+ ++ + +M+S + G L + ++ +E+ C N++ +D ++K G
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC-NIIVENARLDMHLKC---GN 260
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITG 235
AR LF+ M +RN VSW+ MI G NG EA LF M + N V +++
Sbjct: 261 TEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 236 FCKQGKVDEA---WTLFQQIRCRDI----ASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
G V+E ++L Q +++ + M+ ++G EEA +M +
Sbjct: 321 CSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM---PV 377
Query: 289 QPDDLIFVSLFTACA 303
+PD I+ +L ACA
Sbjct: 378 EPDTGIWGALLGACA 392
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 113/270 (41%), Gaps = 45/270 (16%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDV----VTWNSMLTAYWHSGFPQHSRAL 90
+D + ++A + G++ +++D+ +++ + N+ L + G + +R L
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 91 FDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRL 146
F+ M +NVVSW+ M+ G N EA F M N ++ ++S G +
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
+ +R F ++M+ K E PR+ + M++ L
Sbjct: 328 NEGKRYF-----------SLMVQSNDKNLE--------------PRKEH--YACMVDLLG 360
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQI------RCRDIASW 260
+GL EEA+E +MP + + G C V L Q++ DI S+
Sbjct: 361 RSGLLEEAYEFIKKMPVEPDTGIWGALLGAC---AVHRDMILGQKVADVLVETAPDIGSY 417
Query: 261 NIMITG-YAQNGRGEEALNLFSQMVRTGMQ 289
+++++ YA G+ + + S+M + G +
Sbjct: 418 HVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 100/245 (40%), Gaps = 23/245 (9%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
+ + + G +++A +F+ M KD+V WN+ L +G + F+ M V
Sbjct: 151 VMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDS 210
Query: 100 VSWNAMVAGCVQNDMLDEAFN-YFAAMPER---NAASYNAMISGFIKFGRLCDAQRLFKE 155
+ +M++ C Q L+ Y A E N NA + +K G A+ LF+E
Sbjct: 211 FTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE 270
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLY 211
M NVVS++ MI GY G A LF M R N V++ +++ GL
Sbjct: 271 MKQRNVVSWSTMIVGYAM---NGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 212 EEAWELFGRMPQKN-------VVASTAMITGFCKQGKVDEAWTLFQQIRCR-DIASWNIM 263
E F M Q N M+ + G ++EA+ +++ D W +
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 264 ITGYA 268
+ A
Sbjct: 388 LGACA 392
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 48/365 (13%)
Query: 134 NAMISGFIKF-GRLCD---AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDA 189
N +++ FI G L + A R+F + PNV+ + MI Y V G + + F +
Sbjct: 36 NLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLV---GPPLESLSFFSS 92
Query: 190 MPRR----NEVSWTVMIN-------------------------------GLVE----NGL 210
M R +E ++ ++ G+VE G
Sbjct: 93 MKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGR 152
Query: 211 YEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQN 270
+A ++F M ++NVV MI GFC G V+ LF+Q+ R I SWN MI+ ++
Sbjct: 153 MGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKC 212
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD-LSV 329
GR EAL LF +M+ G PD+ V++ ASL +LD G+ ++ G D ++V
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 330 NNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG- 388
NALV Y K G + + F + + ++VSWNT+I+ A + FD MI G
Sbjct: 273 GNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGK 332
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
V P+ TFL +L+ C G+++ LF LM+ + + R+EHY +VD+MSR+G++ A
Sbjct: 333 VAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEA 392
Query: 449 CEIIR 453
+ ++
Sbjct: 393 FKFLK 397
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 185/413 (44%), Gaps = 80/413 (19%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAF-SRAGNITA---ARQVFDKMPTKDVVTWNSMLT 76
H H L +HF ++ +NL +A F S G+++ A +VF + +V+ +N+M+
Sbjct: 24 HAHLL----RHF----LHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIK 75
Query: 77 AYWHSGFPQHSRALFDAMP--------------MKNVVSWNAMVAG-CVQNDMLDEAFNY 121
Y G P S + F +M +K+ S + + G CV +++ F+
Sbjct: 76 CYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHR 135
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIA 181
+ ++ + GR+ DAQ++F EM NVV + +MI G+ + G +
Sbjct: 136 LGKI-------RIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFC---DSGDVE 185
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------PQKNVVAS------ 229
R LF M R+ VSW MI+ L + G EA ELF M P + V +
Sbjct: 186 RGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISA 245
Query: 230 ----------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWN 261
A++ +CK G ++ A +F++++ R++ SWN
Sbjct: 246 SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWN 305
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+I+G A NG+GE ++LF M+ G + P++ F+ + C+ +++G + + L+++
Sbjct: 306 TLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMME 365
Query: 321 H-GFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
++ A+V + S+ G I ++ + + W ++++A H
Sbjct: 366 RFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSH 418
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 168/335 (50%), Gaps = 26/335 (7%)
Query: 118 AFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
A + F AM E + +N+M G+ +F + LF E ++ ++ D Y
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVE-----ILEDGILPDNYT----F 132
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFC 237
+ +A A+ A+ ++ M GL NV +I +
Sbjct: 133 PSLLKACAVAKALEEGRQLHCLSMKLGL-----------------DDNVYVCPTLINMYT 175
Query: 238 KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVS 297
+ VD A +F +I + +N MITGYA+ R EAL+LF +M ++P+++ +S
Sbjct: 176 ECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLS 235
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPD 357
+ ++CA L LD G+ + KH F + VN AL+ M++KCGS+ D+ F + D
Sbjct: 236 VLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKD 295
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
+W+ +I A+A H K+ F++M + V+PD ITFL LL+ C G+++E F+
Sbjct: 296 TQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFS 355
Query: 418 LMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
MV +GI P +HY +VD++SRAG L+ A E I
Sbjct: 356 QMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 390
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 161/339 (47%), Gaps = 21/339 (6%)
Query: 51 GNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN----AMV 106
+++ AR +F+ M D+V +NSM Y P +LF + ++ N +++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLL 136
Query: 107 AGCVQNDMLDEAFN-YFAAMP---ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVV 162
C L+E + +M + N +I+ + + + A+ +F + P VV
Sbjct: 137 KACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVV 196
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWELF 218
Y MI GY + A +LF M + NE++ +++ G + +
Sbjct: 197 CYNAMITGYARRNRPN---EALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 253
Query: 219 GRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGE 274
+ K V +TA+I F K G +D+A ++F+++R +D +W+ MI YA +G+ E
Sbjct: 254 KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 313
Query: 275 EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNAL 333
+++ +F +M +QPD++ F+ L AC+ +++GR+ ++ +V K G + ++
Sbjct: 314 KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSM 373
Query: 334 VTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
V + S+ G++ D+ E P + W ++AA + H
Sbjct: 374 VDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSH 412
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 123/306 (40%), Gaps = 50/306 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+VY I ++ ++ +AR VFD++ VV +N+M+T Y P + +LF M
Sbjct: 163 NVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQ 222
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
K N ++ ++++ C LD I + K
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLD----------------LGKWIHKYAK--------- 257
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
K C V T +ID + K G + A ++F+ M ++ +W+ MI +G
Sbjct: 258 --KHSFCKYVKVNTALIDMFAKC---GSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 212 EEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNI 262
E++ +F RM +NV + ++ G+V+E F Q+ + I +
Sbjct: 313 EKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS 372
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT----YALV 318
M+ ++ G E+A ++ + P +++ L AC+S LD + + L
Sbjct: 373 MVDLLSRAGNLEDAYEFIDKL---PISPTPMLWRILLAACSSHNNLDLAEKVSERIFELD 429
Query: 319 IKHGFD 324
HG D
Sbjct: 430 DSHGGD 435
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 130/462 (28%), Positives = 215/462 (46%), Gaps = 70/462 (15%)
Query: 53 ITAARQVFDKMPTKDVVTW-----NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVA 107
+ R+V + T +V + N ++ Y G +R +F M K+ VSWN+M+
Sbjct: 329 LKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT 388
Query: 108 GCVQNDMLDEAFNYFAAMPERN--AASYNAMIS----GFIKFGRLCDAQRLFKEMPCPNV 161
G QN EA + +M + S+ + S +K+ +L Q++ E
Sbjct: 389 GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKL--GQQIHGE------ 440
Query: 162 VSYTVMIDGYVKVK--------EGGGIARARALFDAMPRRNEVSWTVMINGLV--ENGLY 211
S + ID V V E G + R +F +MP ++VSW +I L E L
Sbjct: 441 -SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLP 499
Query: 212 E--------------------------EAWELFGRMPQ-------KNVVA-----STAMI 233
E + FG + + KN +A A+I
Sbjct: 500 EAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALI 559
Query: 234 TGFCKQGKVDEAWTLFQQI-RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
+ K G++D +F ++ RD +WN MI+GY N +AL+L M++TG + D
Sbjct: 560 ACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDS 619
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
++ ++ +A AS+A L++G + +A ++ +SD+ V +ALV MYSKCG + + F
Sbjct: 620 FMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT 679
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDE 411
+ SWN++I+ +A+H +A F+ M G PD +TF+ +LS C AG ++E
Sbjct: 680 MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F M YG+ PR EH++C+ DV+ RAG+L + + I
Sbjct: 740 GFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIE 781
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 171/400 (42%), Gaps = 60/400 (15%)
Query: 27 VFAKHFSSYDVYRANLNIAAFSRAGNITAARQV----FDKMPTKDVVTWNSMLTAYWHS- 81
+F+ ++ V RA I + I RQ+ F D V N +++ YW
Sbjct: 98 IFSNQYAFVSVLRACQEIGSV----GILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 82 GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM-------PERNAASY- 133
G ++ F + +KN VSWN++++ Q AF F++M E S
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 134 ---------------------------------NAMISGFIKFGRLCDAQRLFKEMPCPN 160
+ ++S F K G L A+++F +M N
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGR 220
V+ ++ G V+ K G + ++M + S+ ++++ E L EE GR
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGR 333
Query: 221 MPQKNVVAS----------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQN 270
+V+ + ++ + K G + +A +F + +D SWN MITG QN
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
G EA+ + M R + P +S ++CASL G+Q + +K G D ++SV+
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVS 453
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
NAL+T+Y++ G + + F + D VSWN+II A A+
Sbjct: 454 NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALAR 493
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 173/414 (41%), Gaps = 64/414 (15%)
Query: 51 GNITAAR----QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
G+ AAR +++ KDV N+++ AY +G +R +FD MP++N VSW +V
Sbjct: 15 GHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIV 74
Query: 107 AGCVQNDMLDEAFNYFAAMPERNAASYN-AMISGF----------IKFGRLCDAQRLFKE 155
+G +N EA + M + S A +S I FGR +FK
Sbjct: 75 SGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL-MFKL 133
Query: 156 MPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
+ V V+I Y K G + A F + +N VSW +I+ + G A+
Sbjct: 134 SYAVDAVVSNVLISMYWKCI--GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAF 191
Query: 216 ELFGRMP------------------------------------QK-----NVVASTAMIT 234
+F M QK ++ + +++
Sbjct: 192 RIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVS 251
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM-VRTGMQPDD- 292
F K G + A +F Q+ R+ + N ++ G + GEEA LF M + P+
Sbjct: 252 AFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESY 311
Query: 293 LIFVSLFT--ACASLALLDQGRQTYALVIKHGF-DSDLSVNNALVTMYSKCGSIVDSELA 349
+I +S F + A L +GR+ + VI G D + + N LV MY+KCGSI D+
Sbjct: 312 VILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
F + D VSWN++I Q+ + +A + M + P T +S LS C
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSC 425
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 3/197 (1%)
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
L+ K+V +I + + G A +F ++ R+ SW +++GY++NG +EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ--GRQTYALVIKHGFDSDLSVNNALV 334
L MV+ G+ + FVS+ AC + + GRQ + L+ K + D V+N L+
Sbjct: 87 LVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLI 146
Query: 335 TMYSKC-GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
+MY KC GS+ + AFG + VSWN+II+ ++Q A F M G RP
Sbjct: 147 SMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTE 206
Query: 394 ITFLSLLSVCCRAGKID 410
TF SL++ C + D
Sbjct: 207 YTFGSLVTTACSLTEPD 223
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 93/205 (45%), Gaps = 15/205 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV + + +S+ G + A + F+ MP ++ +WNSM++ Y G + + LF+ M
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 96 MK-----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFGR 145
+ + V++ +++ C +L+E F +F +M + + ++ M + G
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 146 LCDAQRLFKEMPC-PNVVSYTVMIDGYVKV---KEGGGIARARALFDAMPRRNEVSWTVM 201
L + ++MP PNV+ + ++ + K G A LF P N V++ ++
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEP-ENAVNYVLL 831
Query: 202 INGLVENGLYEEAWELFGRMPQKNV 226
N G +E+ + +M +V
Sbjct: 832 GNMYAAGGRWEDLVKARKKMKDADV 856
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 176/466 (37%), Gaps = 119/466 (25%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS--GFPQHSRALFDA 93
+V +N + ++ G + R++F MP D V+WNS++ A S P+ +A
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNA 508
Query: 94 ---------------------------------MPMKNVV-----SWNAMVAGCVQNDML 115
+ +KN + + NA++A + +
Sbjct: 509 QRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEM 568
Query: 116 DEAFNYFAAMPE-RNAASYNAMISGFIK-------------------------------- 142
D F+ M E R+ ++N+MISG+I
Sbjct: 569 DGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSA 628
Query: 143 FGRLCDAQRLFKEMPC-------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE 195
F + +R + C +VV + ++D Y K G + A F+ MP RN
Sbjct: 629 FASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKC---GRLDYALRFFNTMPVRNS 685
Query: 196 VSWTVMINGLVENGLYEEAWELF------GRMPQKNVVASTAMITGFCKQGKVDEAWTLF 249
SW MI+G +G EEA +LF G+ P +V +++ G ++E + F
Sbjct: 686 YSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTF-VGVLSACSHAGLLEEGFKHF 744
Query: 250 QQIR-----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC-- 302
+ + I ++ M + G ++ + +M M+P+ LI+ ++ AC
Sbjct: 745 ESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMP---MKPNVLIWRTVLGACCR 801
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALV-TMYSKCGSIVDSELAFGQTSQPDI--- 358
A+ + G++ ++ + + + +VN L+ MY+ G D A + D+
Sbjct: 802 ANGRKAELGKKAAEMLFQ--LEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKE 859
Query: 359 --VSWNTI-------IAAFAQH----VLYYKARSYFDQMIAVGVRP 391
SW T+ +A H V+Y K + +M G P
Sbjct: 860 AGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVP 905
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/241 (34%), Positives = 131/241 (54%)
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
+ A +LF PQ++VV +I G K ++ A LF + RD+ SWN +I+GYAQ
Sbjct: 169 DSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMN 228
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
EA+ LF +MV G++PD++ VS +ACA +G+ + + D +
Sbjct: 229 HCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLAT 288
Query: 332 ALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRP 391
LV Y+KCG I + F S + +WN +I A H YF +M++ G++P
Sbjct: 289 GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKP 348
Query: 392 DGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
DG+TF+S+L C +G +DE+ NLF+ M Y + +HY C+ D++ RAG ++ A E+
Sbjct: 349 DGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEM 408
Query: 452 I 452
I
Sbjct: 409 I 409
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 125/277 (45%), Gaps = 22/277 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ N I +S I +A Q+FD+ P +DVVT+N ++ + +R LFD+MP
Sbjct: 151 DLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMP 210
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI---------SGFIKFGRL 146
++++VSWN++++G Q + EA F M N I SG + G+
Sbjct: 211 LRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKA 270
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
K + + ++ T ++D Y K G I A +F+ + +W MI GL
Sbjct: 271 IHDYTKRKRLFIDSFLA-TGLVDFYAKC---GFIDTAMEIFELCSDKTLFTWNAMITGLA 326
Query: 207 ENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRC-----RDI 257
+G E + F +M + V +++ G G VDEA LF Q+R R++
Sbjct: 327 MHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREM 386
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
+ M + G EEA + QM + G + L+
Sbjct: 387 KHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLL 423
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 42/213 (19%)
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQG--RQTYALVIKHGFDSDLSVNNALVTM 336
F +M R + PD F +F ACA+ D + + ++ G SDL N L+ +
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 337 YSKCGSIVDSELAFGQTSQPDIVS-------------------------------WNTII 365
YS I + F + Q D+V+ WN++I
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLI 221
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+ +AQ +A FD+M+A+G++PD + +S LS C ++G + +HDY
Sbjct: 222 SGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGK-----AIHDYTK 276
Query: 426 PPR----SEHYACLVDVMSRAGQLQRACEIIRL 454
R S LVD ++ G + A EI L
Sbjct: 277 RKRLFIDSFLATGLVDFYAKCGFIDTAMEIFEL 309
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 204/455 (44%), Gaps = 57/455 (12%)
Query: 52 NITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVA 107
+++ R + D+M V+ N +L Y + + LFD M N VS M++
Sbjct: 98 SLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMIS 157
Query: 108 GCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIK---------FGRLCDAQRLFKEMPC 158
+ +LD+A F+ M ++M + +K FGR A + + C
Sbjct: 158 AYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAH-VIRAGLC 216
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
N T +++ YVK G + A+ +FD M + V+ T ++ G + G +A +LF
Sbjct: 217 SNTSIETGIVNMYVKC---GWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLF 273
Query: 219 GRMP---------------------------------------QKNVVASTAMITGFCKQ 239
+ + V T ++ + K
Sbjct: 274 VDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKC 333
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM-VRTGMQPDDLIFVSL 298
+ A FQ+IR + SW+ +I+GY Q + EEA+ F + + + + S+
Sbjct: 334 SSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSI 393
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDI 358
F AC+ LA + G Q +A IK +AL+TMYSKCG + D+ F PDI
Sbjct: 394 FQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDI 453
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
V+W I+ A + +A F++M++ G++P+ +TF+++L+ C AG +++ + +
Sbjct: 454 VAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDT 513
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
M+ Y + P +HY C++D+ +R+G L A + ++
Sbjct: 514 MLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMK 548
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%)
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
N+ + +++ + EA +M + G+ + LF AC L L GR + +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRM 111
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
+ + + N ++ MY +C S+ D++ F + S+ + VS T+I+A+A+ + KA
Sbjct: 112 GIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGL 171
Query: 381 FDQMIAVGVRPDGITFLSLL 400
F M+A G +P + +LL
Sbjct: 172 FSGMLASGDKPPSSMYTTLL 191
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 105/250 (42%), Gaps = 25/250 (10%)
Query: 81 SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMI--S 138
S F RA F + N VSW+A+++G Q +EA F ++ +NA+ N+ S
Sbjct: 334 SSFESACRA-FQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTS 392
Query: 139 GFIKFGRLCDAQ-------RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
F L D K + + +I Y K G + A +F++M
Sbjct: 393 IFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC---GCLDDANEVFESMD 449
Query: 192 RRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEA-W 246
+ V+WT I+G G EA LF +M + N V A++T G V++
Sbjct: 450 NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKH 509
Query: 247 TLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
L +R ++A ++ MI YA++G +EAL M +PD + + + C
Sbjct: 510 CLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM---PFEPDAMSWKCFLSGC 566
Query: 303 ASLALLDQGR 312
+ L+ G
Sbjct: 567 WTHKNLELGE 576
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 87/193 (45%), Gaps = 14/193 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM---PMK-NV 99
I +S+ G + A +VF+ M D+V W + ++ + + G + LF+ M MK N
Sbjct: 429 ITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNS 488
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPER-NAA----SYNAMISGFIKFGRLCDAQRLFK 154
V++ A++ C ++++ + M + N A Y+ MI + + G L +A + K
Sbjct: 489 VTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMK 548
Query: 155 EMPC-PNVVSYTVMIDGYVKVK--EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
MP P+ +S+ + G K E G IA + + + + N G +
Sbjct: 549 NMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEE--LRQLDPEDTAGYVLPFNLYTWAGKW 606
Query: 212 EEAWELFGRMPQK 224
EEA E+ M ++
Sbjct: 607 EEAAEMMKLMNER 619
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 137/242 (56%), Gaps = 4/242 (1%)
Query: 214 AWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
A +LF MP KN+V +++ + K G V A +F ++ RD+ +W+ MI GY + G
Sbjct: 162 ARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEY 221
Query: 274 EEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
+AL +F QM+R G + +++ VS+ ACA L L++G+ + ++ + + +
Sbjct: 222 NKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 333 LVTMYSKCGSIVDSELAFGQTS--QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
L+ MY+KCGSI D+ F + S + D + WN II A H ++ F +M +
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 391 PDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACE 450
PD ITFL LL+ C G + E+ + F + + G P+SEHYAC+VDV+SRAG ++ A +
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHD 400
Query: 451 II 452
I
Sbjct: 401 FI 402
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 135/288 (46%), Gaps = 27/288 (9%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+D++ N I + + +AR++FD+MP K++VTWNS+L AY SG +R +FD M
Sbjct: 141 WDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM 200
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN--AMIS--------GFIKFG 144
++VV+W++M+ G V+ ++A F M ++ N M+S G + G
Sbjct: 201 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260
Query: 145 RLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF--DAMPRRNEVSWTVMI 202
+ L +P V+ T +ID Y K G I A ++F ++ + + W +I
Sbjct: 261 KTVHRYILDVHLPL-TVILQTSLIDMYAKC---GSIGDAWSVFYRASVKETDALMWNAII 316
Query: 203 NGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRDI- 257
GL +G E+ +LF +M + + + ++ G V EAW F+ ++
Sbjct: 317 GGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAE 376
Query: 258 ---ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ M+ ++ G ++A + S+M ++P + +L C
Sbjct: 377 PKSEHYACMVDVLSRAGLVKDAHDFISEM---PIKPTGSMLGALLNGC 421
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 100/203 (49%), Gaps = 4/203 (1%)
Query: 218 FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEAL 277
G ++ V+ T + G VD A+ ++ WN +I G++ + E+++
Sbjct: 34 LGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSI 93
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMY 337
+++ QM+R G+ PD + + L + + L+ G + V+K G + DL + N L+ MY
Sbjct: 94 SVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMY 153
Query: 338 SKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+ F + ++V+WN+I+ A+A+ AR FD+M D +T+
Sbjct: 154 GSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM----SERDVVTWS 209
Query: 398 SLLSVCCRAGKIDESMNLFNLMV 420
S++ + G+ ++++ +F+ M+
Sbjct: 210 SMIDGYVKRGEYNKALEIFDQMM 232
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/393 (29%), Positives = 196/393 (49%), Gaps = 14/393 (3%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER--- 128
NS++ Y S + + +FD MP +V+SWN++V+G VQ+ E F +
Sbjct: 94 NSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVF 153
Query: 129 -NAASYNAMISGFIKFG----RLCDAQRLFK-EMPCPNVVSYTVMIDGYVKVKEGGGIAR 182
N S+ A ++ + C +L K + NVV +ID Y K G +
Sbjct: 154 PNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKC---GFMDD 210
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKV 242
A +F M ++ VSW ++ NG E F +MP + V +I F K G
Sbjct: 211 AVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDF 270
Query: 243 DEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ A+ + + + +SWN ++TGY + + EA F++M +G++ D+ + A
Sbjct: 271 NNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAV 330
Query: 303 ASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
A+LA++ G +A K G DS + V +AL+ MYSKCG + +EL F + +++ WN
Sbjct: 331 AALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWN 390
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDESM-NLFNLMV 420
+I+ +A++ +A F+Q+ ++PD TFL+LL+VC E M F +M+
Sbjct: 391 EMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMI 450
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
++Y I P EH L+ M + G++ +A ++I+
Sbjct: 451 NEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQ 483
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 177/429 (41%), Gaps = 94/429 (21%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG-----------------FPQ---- 85
+ + ++ A +VFD+MP DV++WNS+++ Y SG FP
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 86 -------------------HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
HS+ + + NVV N ++ + +D+A F M
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARAL 186
E++ S+NA+++ + G+L F +MP P+ V+Y +ID +VK G A +
Sbjct: 220 EKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVK---SGDFNNAFQV 276
Query: 187 FDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKN--------------------- 225
MP N SW ++ G V + EA E F +M
Sbjct: 277 LSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVV 336
Query: 226 ------------------VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
VV ++A+I + K G + A +F + +++ WN MI+GY
Sbjct: 337 PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGY 396
Query: 268 AQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
A+NG EA+ LF+Q+ + ++PD F++L C+ + + Y ++ + +
Sbjct: 397 ARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIK 456
Query: 327 LSVNN--ALVTMYSKCGSI-----VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
SV + +L+ + G + V E FG D V+W ++ A + A++
Sbjct: 457 PSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGY----DGVAWRALLGACSARKDLKAAKT 512
Query: 380 YFDQMIAVG 388
+MI +G
Sbjct: 513 VAAKMIELG 521
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 104/196 (53%), Gaps = 5/196 (2%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
N S +++ + +++A +F ++ D+ SWN +++GY Q+GR +E + LF ++
Sbjct: 89 NTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELH 148
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS-DLSVNNALVTMYSKCGSI 343
R+ + P++ F + ACA L L G ++ ++K G + ++ V N L+ MY KCG +
Sbjct: 149 RSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFM 208
Query: 344 VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
D+ L F + D VSWN I+A+ +++ +F QM PD +T+ L+
Sbjct: 209 DDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----PNPDTVTYNELIDAF 264
Query: 404 CRAGKIDESMNLFNLM 419
++G + + + + M
Sbjct: 265 VKSGDFNNAFQVLSDM 280
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 7/224 (3%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+V N I + + G + A VF M KD V+WN+++ + +G + F MP
Sbjct: 191 NVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMP 250
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
+ V++N ++ V++ + AF + MP N++S+N +++G++ + +A F +
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK 310
Query: 156 MPCPNV------VSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENG 209
M V +S + + V G + A A + R V+ + +I+ + G
Sbjct: 311 MHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVA-SALIDMYSKCG 369
Query: 210 LYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIR 253
+ + A +F MP+KN++ MI+G+ + G EA LF Q++
Sbjct: 370 MLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLK 413
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 18/211 (8%)
Query: 25 LLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFP 84
+LVF +H D N +A+ SR G + F +MP D VT+N ++ A+ SG
Sbjct: 212 VLVF-QHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDF 270
Query: 85 QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA--SYNAMISGFIK 142
++ + MP N SWN ++ G V ++ EA +F M Y+ I
Sbjct: 271 NNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAV 330
Query: 143 -------FGRLCD--AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
+G L A +L + VV + +ID Y K G + A +F MPR+
Sbjct: 331 AALAVVPWGSLIHACAHKLGLD---SRVVVASALIDMYSKC---GMLKHAELMFWTMPRK 384
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQK 224
N + W MI+G NG EA +LF ++ Q+
Sbjct: 385 NLIVWNEMISGYARNGDSIEAIKLFNQLKQE 415
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SW+ ++ A+ G L +++ G +PD V L + + RQ + V
Sbjct: 23 SWSTIVPALARFG-SIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
KHGF S+ ++N+L+ Y S+ D+ F + PD++SWN++++ + Q + +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCR 405
F ++ V P+ +F + L+ C R
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACAR 168
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 186/407 (45%), Gaps = 30/407 (7%)
Query: 52 NITAARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVA 107
N + +Q+ K+ T D + +++ G Q++ +F+ + + +WN M+
Sbjct: 32 NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIR 91
Query: 108 GCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVM 167
N EA F M MIS Q F + P V+ +
Sbjct: 92 SLSVNHKPREALLLFILM----------MIS----------HQSQFDKFTFPFVIKACLA 131
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
+ G+A F+ + +N +++ + G + ++F +MP +++V
Sbjct: 132 SSSIRLGTQVHGLAIKAGFFNDVFFQN-----TLMDLYFKCGKPDSGRKVFDKMPGRSIV 186
Query: 228 ASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
+ T M+ G ++D A +F Q+ R++ SW MIT Y +N R +EA LF +M
Sbjct: 187 SWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDD 246
Query: 288 MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
++P++ V+L A L L GR + K+GF D + AL+ MYSKCGS+ D+
Sbjct: 247 VKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDAR 306
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF-DQMIAVGVRPDGITFLSLLSVCCRA 406
F + +WN++I + H +A S F + V PD ITF+ +LS C
Sbjct: 307 KVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANT 366
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G + + + F M+ YGI P EH AC++ ++ +A ++++A ++
Sbjct: 367 GNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVE 413
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 150/340 (44%), Gaps = 52/340 (15%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
KH + D I+ S G A VF+++ + TWN M+ + + P+ +
Sbjct: 45 KHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALL 104
Query: 90 LFDAMPMKNVVSWNA-----MVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGF 140
LF M + + ++ ++ C+ + + + + N ++ +
Sbjct: 105 LFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLY 164
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV 200
K G+ +++F +MP ++VS+T M+ G V + + A +F+ MP RN VSWT
Sbjct: 165 FKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ---LDSAEIVFNQMPMRNVVSWTA 221
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVVAS------------------------------- 229
MI V+N +EA++LF RM +V +
Sbjct: 222 MITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNG 281
Query: 230 --------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
TA+I + K G + +A +F ++ + +A+WN MIT +G GEEAL+LF
Sbjct: 282 FVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFE 341
Query: 282 QMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
+M ++PD + FV + +ACA+ + G + + +I+
Sbjct: 342 EMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 151/331 (45%), Gaps = 22/331 (6%)
Query: 24 FLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYW 79
F+L+ H S +D + I A + +I QV DV N+++ Y+
Sbjct: 106 FILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYF 165
Query: 80 HSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISG 139
G P R +FD MP +++VSW M+ G V N LD A F MP RN S+ AMI+
Sbjct: 166 KCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITA 225
Query: 140 FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK-EGGGIARARALFDAMPRRNEV-- 196
++K R +A +LF+ M +V I ++ + G ++ R + D + V
Sbjct: 226 YVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLD 285
Query: 197 --SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
T +I+ + G ++A ++F M K++ +MIT G +EA +LF+++
Sbjct: 286 CFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEE 345
Query: 255 R-----DIASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALL 308
D ++ +++ A G ++ L F++M++ G+ P + AC + LL
Sbjct: 346 EASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISP-----IREHNACM-IQLL 399
Query: 309 DQGRQT-YALVIKHGFDSDLSVNNALVTMYS 338
+Q + A + DSD N++ Y+
Sbjct: 400 EQALEVEKASNLVESMDSDPDFNSSFGNEYT 430
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 161 bits (408), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 177/333 (53%), Gaps = 22/333 (6%)
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
N++ISG+ G A RLF +VV++T MIDG+V+ G + A F M +
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVR---NGSASEAMVYFVEMKKT 198
Query: 194 ----NEVSWTVMIN--GLVEN--------GLYEEAWELFGRMPQKNVVASTAMITGFCKQ 239
NE++ ++ G VE+ GLY E GR+ + +V ++++ + K
Sbjct: 199 GVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLET----GRV-KCDVFIGSSLVDMYGKC 253
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
D+A +F ++ R++ +W +I GY Q+ ++ + +F +M+++ + P++ S+
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 313
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
+ACA + L +GR+ + +IK+ + + + L+ +Y KCG + ++ L F + + ++
Sbjct: 314 SACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY 373
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+W +I FA H A F M++ V P+ +TF+++LS C G ++E LF M
Sbjct: 374 TWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSM 433
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+ + P+++HYAC+VD+ R G L+ A +I
Sbjct: 434 KGRFNMEPKADHYACMVDLFGRKGLLEEAKALI 466
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 172/360 (47%), Gaps = 26/360 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D + N I+ +S +G A ++FD KDVVTW +M+ + +G + F M
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 96 MKNVVSWNAMV-------AGCVQNDMLDEAFNYFAAMPERNAASY---NAMISGFIKFGR 145
K V+ N M AG V++ + + R ++++ + K
Sbjct: 197 -KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSC 255
Query: 146 LCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVM 201
DAQ++F EMP NVV++T +I GYV+ + + +F+ M + NE + + +
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSR---CFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 202 INGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
++ G + M + N A T +I + K G ++EA +F+++ +++
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+W MI G+A +G +A +LF M+ + + P+++ F+++ +ACA L+++GR+ + L
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-L 431
Query: 318 VIKHGFDSDLSVNN--ALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAAFAQHVLY 374
+K F+ + ++ +V ++ + G + +++ + +P V W + + H Y
Sbjct: 432 SMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDY 491
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 128/271 (47%), Gaps = 23/271 (8%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
DV +S++ Y ++ +FD MP +NVV+W A++AG VQ+ D+ F M
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEML 298
Query: 127 ERNAA----SYNAMISGFIKFGRLCDAQR----LFKEMPCPNVVSYTVMIDGYVKVKEGG 178
+ + A + ++++S G L +R + K N + T +ID YVK G
Sbjct: 299 KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKC---G 355
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMIT 234
+ A +F+ + +N +WT MING +G +A++LF M +V V A+++
Sbjct: 356 CLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLS 415
Query: 235 GFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
G V+E LF ++ R + M+ + + G EEA L +M M+
Sbjct: 416 ACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERM---PME 472
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIK 320
P ++++ +LF +C + G+ + VIK
Sbjct: 473 PTNVVWGALFGSCLLHKDYELGKYAASRVIK 503
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 77/170 (45%), Gaps = 8/170 (4%)
Query: 245 AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNL--FSQMVRTGMQPDDLIFVSLFTAC 302
A L Q++ I W+ +I ++ L+ + M R G+ P F L A
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAV 114
Query: 303 ASLALLDQGR-QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSW 361
L D Q +A ++K G DSD V N+L++ YS G + F D+V+W
Sbjct: 115 --FKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTW 172
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+I F ++ +A YF +M GV + +T +S+L AGK+++
Sbjct: 173 TAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKA---AGKVED 219
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 79/404 (19%)
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDG-----YVKVKEG 177
ER+ YNA+ISGF+ G DA ++EM P+ ++ ++ G VK+
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKV 182
Query: 178 GGIA--------------------------RARALFDAMPRRNE-VSWTVMINGLVENGL 210
G+A A+ +FD +P R++ V W ++NG +
Sbjct: 183 HGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFR 242
Query: 211 YEEAWELFGRMPQK---------------------------------------NVVASTA 231
+E+A +F +M ++ ++V S A
Sbjct: 243 FEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNA 302
Query: 232 MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
+I + K ++EA ++F+ + RD+ +WN ++ + G + L LF +M+ +G++PD
Sbjct: 303 LIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPD 362
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGF----DSDLSVNNALVTMYSKCGSIVDSE 347
+ ++ C LA L QGR+ + +I G S+ ++N+L+ MY KCG + D+
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
+ F D SWN +I + A F M GV+PD ITF+ LL C +G
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
++E N M Y I P S+HYAC++D++ RA +L+ A E+
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYEL 526
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 121/282 (42%), Gaps = 27/282 (9%)
Query: 18 TARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTA 77
R H L V K S D+ +N I + ++ + A +F+ M +D+ TWNS+L
Sbjct: 280 NGRSIHGLAV--KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCV 337
Query: 78 YWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAM-------- 125
+ + G + ALF+ M ++V+ ++ C + L + M
Sbjct: 338 HDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNR 397
Query: 126 PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARA 185
N +N+++ ++K G L DA+ +F M + S+ +MI+GY V+ G + A
Sbjct: 398 KSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGY-GVQSCGEL--ALD 454
Query: 186 LFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTA-----MITGF 236
+F M R +E+++ ++ +G E +M + T+ +I
Sbjct: 455 MFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDML 514
Query: 237 CKQGKVDEAWTL-FQQIRCRDIASWNIMITGYAQNGRGEEAL 277
+ K++EA+ L + C + W +++ +G + AL
Sbjct: 515 GRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLAL 556
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGF-DSDLSVNNALVTMYSKCGSIVDSELAFGQTS 354
++ CA G+Q + +++ GF D +LV MY+KCG + + L FG S
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG-GS 122
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
+ D+ +N +I+ F + A + +M A G+ PD TF SLL
Sbjct: 123 ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLL 168
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 12/191 (6%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSW 102
+ + G++ AR VFD M KD +WN M+ Y + + +F M V +++
Sbjct: 412 YVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITF 471
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPE-----RNAASYNAMISGFIKFGRLCDAQRLFKEMP 157
++ C + L+E N+ A M + Y +I + +L +A L P
Sbjct: 472 VGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKP 531
Query: 158 -CPN-VVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
C N VV +++ + + + + L + P + +M N VE G YEE
Sbjct: 532 ICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCG-GYVLMSNVYVEAGKYEEVL 590
Query: 216 ELFGRMPQKNV 226
++ M Q+NV
Sbjct: 591 DVRDAMRQQNV 601
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 180/380 (47%), Gaps = 47/380 (12%)
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIK--- 142
++R + + + +N W A++ G DEA + M + + S +K
Sbjct: 101 YARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACG 160
Query: 143 ------FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
GR AQ C V T MID YVK + I AR +FD
Sbjct: 161 TMKDLNLGRQFHAQTFRLRGFCFVYVGNT-MIDMYVKCE---SIDCARKVFD-------- 208
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
MP+++V++ T +I + + G ++ A LF+ + +D
Sbjct: 209 -----------------------EMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ +W M+TG+AQN + +EAL F +M ++G++ D++ +ACA L +
Sbjct: 246 MVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQ 305
Query: 317 LVIKHGFD-SD-LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+ K G+ SD + + +AL+ MYSKCG++ ++ F + ++ +++++I A H
Sbjct: 306 IAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRA 365
Query: 375 YKARSYFDQMIA-VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
+A F M+ ++P+ +TF+ L C +G +D+ +F+ M +G+ P +HY
Sbjct: 366 QEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYT 425
Query: 434 CLVDVMSRAGQLQRACEIIR 453
C+VD++ R G+LQ A E+I+
Sbjct: 426 CMVDLLGRTGRLQEALELIK 445
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 133/288 (46%), Gaps = 30/288 (10%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
VY N I + + +I AR+VFD+MP +DV++W ++ AY G + + LF+++P
Sbjct: 184 VYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT 243
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFI----KFGRLCDAQRL 152
K++V+W AMV G QN EA YF M + + ++G+I + G A R
Sbjct: 244 KDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRA 303
Query: 153 FK------EMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
+ P +VV + +ID Y K G + A +F +M +N +++ MI GL
Sbjct: 304 VQIAQKSGYSPSDHVVIGSALIDMYSKC---GNVEEAVNVFMSMNNKNVFTYSSMILGLA 360
Query: 207 ENGLYEEAWELFGRMP-----QKNVVASTAMITGFCKQGKVDEAWTLFQQIR-------C 254
+G +EA LF M + N V + G VD+ +F +
Sbjct: 361 THGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPT 420
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
RD + M+ + GR +EAL L M ++P ++ +L AC
Sbjct: 421 RD--HYTCMVDLLGRTGRLQEALELIKTM---SVEPHGGVWGALLGAC 463
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 140/255 (54%)
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
T +I+ E G + ++F +P + V TAM+T + G V A LF+ + RD
Sbjct: 147 TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPI 206
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
+WN MI+GYAQ G EALN+F M G++ + + +S+ +AC L LDQGR ++ +
Sbjct: 207 AWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYI 266
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
++ + + LV +Y+KCG + + F + ++ +W++ + A + K
Sbjct: 267 ERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCL 326
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F M GV P+ +TF+S+L C G +DE F+ M +++GI P+ EHY CLVD+
Sbjct: 327 ELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDL 386
Query: 439 MSRAGQLQRACEIIR 453
+RAG+L+ A II+
Sbjct: 387 YARAGRLEDAVSIIQ 401
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 132/286 (46%), Gaps = 25/286 (8%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
I+ ++ G + + +VF+ +P D V +M+TA G +R LF+ MP ++ ++WN
Sbjct: 150 ISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWN 209
Query: 104 AMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
AM++G Q EA N F M + N + +++S + G L D R
Sbjct: 210 AMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL-DQGRWAHSYIER 268
Query: 160 NVVSYTV-----MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEA 214
N + TV ++D Y K G + +A +F M +N +W+ +NGL NG E+
Sbjct: 269 NKIKITVRLATTLVDLYAKC---GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKC 325
Query: 215 WELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMIT 265
ELF M Q N V +++ G G VDE F +R + + ++
Sbjct: 326 LELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVD 385
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
YA+ GR E+A+++ QM M+P ++ SL A L+ G
Sbjct: 386 LYARAGRLEDAVSIIQQM---PMKPHAAVWSSLLHASRMYKNLELG 428
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 102/228 (44%), Gaps = 42/228 (18%)
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTG--MQPDDLIFVSLFTACASLALLDQGRQTYALV 318
N MI + ++ E++ + + +++ +G ++PD+ L AC L + + G Q + +
Sbjct: 75 NSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMT 134
Query: 319 IKHGFDSDLSVNNALVTMY-------------------------------SKCGSIVDSE 347
I+ GFD+D V L+++Y ++CG +V +
Sbjct: 135 IRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFAR 194
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
F + D ++WN +I+ +AQ +A + F M GV+ +G+ +S+LS C + G
Sbjct: 195 KLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLG 254
Query: 408 KIDESMNLFNLMVHDY----GIPPRSEHYACLVDVMSRAGQLQRACEI 451
+D+ H Y I LVD+ ++ G +++A E+
Sbjct: 255 ALDQGR-----WAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEV 297
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 150/315 (47%), Gaps = 42/315 (13%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM------PQKNVVAS-- 229
G + AR LFD + R+ VSW MI+G E G ++A +LF +M P + + S
Sbjct: 181 GQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSML 240
Query: 230 -------------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
+ +I+ + K G +D A +F Q+ +D
Sbjct: 241 GACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRV 300
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
+W MIT Y+QNG+ EA LF +M +TG+ PD ++ +AC S+ L+ G+Q
Sbjct: 301 AWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHA 360
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+ ++ V LV MY KCG + ++ F + +WN +I A+A +A
Sbjct: 361 SELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEAL 420
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
FD+M V P ITF+ +LS C AG + + F+ M +G+ P+ EHY ++D+
Sbjct: 421 LLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDL 477
Query: 439 MSRAGQLQRACEIIR 453
+SRAG L A E +
Sbjct: 478 LSRAGMLDEAWEFME 492
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 5/237 (2%)
Query: 217 LFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEA 276
LF +++V + ++I + K G+V A LF +I RD SWN MI+GY++ G ++A
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
++LF +M G +PD+ VS+ AC+ L L GR + I + + L++M
Sbjct: 218 MDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISM 277
Query: 337 YSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
Y KCG + + F Q + D V+W +I ++Q+ +A F +M GV PD T
Sbjct: 278 YGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTL 337
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC--LVDVMSRAGQLQRACEI 451
++LS C G ++ + H + + Y LVD+ + G+++ A +
Sbjct: 338 STVLSACGSVGALELGK---QIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRV 391
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 164/376 (43%), Gaps = 76/376 (20%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ + I +++ G + AR++FD++ +D V+WNSM++ Y +G+ + + LF M
Sbjct: 166 DVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKME 225
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMIS--GFIKFGRLCDAQRLF 153
+E F ER S S G ++ GRL + +
Sbjct: 226 --------------------EEGFE----PDERTLVSMLGACSHLGDLRTGRLLEEMAIT 261
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
K++ + + +I Y K G + AR +F+ M +++ V+WT MI +NG E
Sbjct: 262 KKIGLSTFLG-SKLISMYGKC---GDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSE 317
Query: 214 AWELFGRMP---------------------------------------QKNVVASTAMIT 234
A++LF M Q N+ +T ++
Sbjct: 318 AFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVD 377
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
+ K G+V+EA +F+ + ++ A+WN MIT YA G +EAL LF +M + P D+
Sbjct: 378 MYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDIT 434
Query: 295 FVSLFTACASLALLDQG-RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
F+ + +AC L+ QG R + + G + ++ + S+ G ++D F +
Sbjct: 435 FIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAG-MLDEAWEFMER 493
Query: 354 --SQPDIVSWNTIIAA 367
+PD + I+ A
Sbjct: 494 FPGKPDEIMLAAILGA 509
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 6/161 (3%)
Query: 259 SWNIMITGYAQNGRGEEA-LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
S+N MI G EA L+L+ +M +G++PD + +F ACA L + GR ++
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSS 157
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
+ K G + D+ +N++L+ MY+KCG + + F + ++ D VSWN++I+ +++ A
Sbjct: 158 LFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDA 217
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCC-----RAGKIDESM 413
F +M G PD T +S+L C R G++ E M
Sbjct: 218 MDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEM 258
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 106/242 (43%), Gaps = 46/242 (19%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF----------DA 93
I+ + + G++ +AR+VF++M KD V W +M+T Y +G + LF DA
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDA 334
Query: 94 MPMKNVVSWNAMVAG--------------CVQNDM---------------LDEAFNYFAA 124
+ V+S V +Q+++ ++EA F A
Sbjct: 335 GTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEA 394
Query: 125 MPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP-NVVSYTVMIDGYVK---VKEGGG- 179
MP +N A++NAMI+ + G +A LF M P + +++ ++ V V +G
Sbjct: 395 MPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQGCRY 454
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQ 239
++F +P+ +T +I+ L G+ +EAWE R P K A I G C +
Sbjct: 455 FHEMSSMFGLVPKIEH--YTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHK 512
Query: 240 GK 241
K
Sbjct: 513 RK 514
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 95/203 (46%), Gaps = 8/203 (3%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+++Y A + + + G + A +VF+ MP K+ TWN+M+TAY H G + + LFD M
Sbjct: 367 HNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM 426
Query: 95 PM-KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCD 148
+ + +++ +++ CV ++ + YF M Y +I + G L +
Sbjct: 427 SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDE 486
Query: 149 AQRLFKEMPC-PNVVSYTVMIDGYVKVKEGGGIARA-RALFDAMPRRNEVSWTVMINGLV 206
A + P P+ + ++ K K+ +A R L + +N ++ + N L
Sbjct: 487 AWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLA 546
Query: 207 ENGLYEEAWELFGRMPQKNVVAS 229
+ +++E+ ++ M + VV +
Sbjct: 547 DMKMWDESAKMRALMRDRGVVKT 569
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 188/386 (48%), Gaps = 32/386 (8%)
Query: 96 MKNVVSWNAMVAGCVQNDM----LDEAFNYFAAMPERNAASYNAMISGFIKF--GRLCDA 149
M++ ++ ++ C +D+ LD A F MP+RN S+N +I GF + + A
Sbjct: 52 MRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIA 111
Query: 150 QRLFKEMPC-----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTV 200
LF EM PN ++ ++ K G I + + + +E +
Sbjct: 112 ITLFYEMMSDEFVEPNRFTFPSVLKACAKT---GKIQEGKQIHGLALKYGFGGDEFVMSN 168
Query: 201 MINGLVENGLYEEAWELFGR-MPQKNVVAST-------------AMITGFCKQGKVDEAW 246
++ V G ++A LF + + +K++V T MI G+ + G A
Sbjct: 169 LVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAAR 228
Query: 247 TLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
LF ++R R + SWN MI+GY+ NG ++A+ +F +M + ++P+ + VS+ A + L
Sbjct: 229 MLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLG 288
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIA 366
L+ G + G D + +AL+ MYSKCG I + F + + ++++W+ +I
Sbjct: 289 SLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMIN 348
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
FA H A F +M GVRP + +++LL+ C G ++E F+ MV G+
Sbjct: 349 GFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLE 408
Query: 427 PRSEHYACLVDVMSRAGQLQRACEII 452
PR EHY C+VD++ R+G L A E I
Sbjct: 409 PRIEHYGCMVDLLGRSGLLDEAEEFI 434
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 175/385 (45%), Gaps = 75/385 (19%)
Query: 52 NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF----------DAMPMKNVVS 101
++ A ++F++MP ++ +WN+++ + S +AL D N +
Sbjct: 74 DLDYAHKIFNQMPQRNCFSWNTIIRGFSES---DEDKALIAITLFYEMMSDEFVEPNRFT 130
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC----DAQRLF---- 153
+ +++ C + + E + ++S ++ +C DA+ LF
Sbjct: 131 FPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNI 190
Query: 154 --KEMPC--------PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMIN 203
K+M +V + VMIDGY+++ G AR LFD M +R+ VSW MI+
Sbjct: 191 IEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL---GDCKAARMLFDKMRQRSVVSWNTMIS 247
Query: 204 GLVENGLYEEAWELFGRMPQKNV------------------------------------- 226
G NG +++A E+F M + ++
Sbjct: 248 GYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRI 307
Query: 227 --VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
V +A+I + K G +++A +F+++ ++ +W+ MI G+A +G+ +A++ F +M
Sbjct: 308 DDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMR 367
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYA-LVIKHGFDSDLSVNNALVTMYSKCGSI 343
+ G++P D+ +++L TAC+ L+++GR+ ++ +V G + + +V + + G +
Sbjct: 368 QAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLL 427
Query: 344 VDS-ELAFGQTSQPDIVSWNTIIAA 367
++ E +PD V W ++ A
Sbjct: 428 DEAEEFILNMPIKPDDVIWKALLGA 452
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 24/293 (8%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
++V WN M+ Y G + +R LFD M ++VVSWN M++G N +A F M
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 127 ERN-AASYNAMISGFIKFGRLCDAQ-----RLFKEMPCPNV--VSYTVMIDGYVKVKEGG 178
+ + +Y ++S RL + L+ E + V + +ID Y K G
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC---G 323
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMIT 234
I +A +F+ +PR N ++W+ MING +G +A + F +M Q V VA ++T
Sbjct: 324 IIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 235 GFCKQGKVDEAWTLFQQIRCRD-----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
G V+E F Q+ D I + M+ ++G +EA M ++
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM---PIK 440
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
PDD+I+ +L AC ++ G++ A ++ D AL MY+ G+
Sbjct: 441 PDDVIWKALLGACRMQGNVEMGKRV-ANILMDMVPHDSGAYVALSNMYASQGN 492
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 54/288 (18%)
Query: 217 LFGRMPQKNVVASTAMITGFC-----KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
+F + Q + A I FC +D A +F Q+ R+ SWN +I G++++
Sbjct: 45 VFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESD 104
Query: 272 RGEE--ALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
+ A+ LF +M+ ++P+ F S+ ACA + +G+Q + L +K+GF D
Sbjct: 105 EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEF 164
Query: 329 VNNALVTMYSKCGSIVD------------------------------------------- 345
V + LV MY CG + D
Sbjct: 165 VMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDC 224
Query: 346 --SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
+ + F + Q +VSWNT+I+ ++ + + A F +M +RP+ +T +S+L
Sbjct: 225 KAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAI 284
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
R G + E +L D GI + L+D+ S+ G +++A +
Sbjct: 285 SRLGSL-ELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 88/195 (45%), Gaps = 14/195 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
I +S+ G I A VF+++P ++V+TW++M+ + G + F M V
Sbjct: 316 IDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSD 375
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGRLCDAQRLFK 154
V++ ++ C +++E YF+ M E Y M+ + G L +A+
Sbjct: 376 VAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFIL 435
Query: 155 EMPC-PNVVSYTVMIDGYVKVKEGGGIAR--ARALFDAMPRRNEVSWTVMINGLVENGLY 211
MP P+ V + ++ G +++ + + A L D +P + ++ + N G +
Sbjct: 436 NMPIKPDDVIWKALL-GACRMQGNVEMGKRVANILMDMVP-HDSGAYVALSNMYASQGNW 493
Query: 212 EEAWELFGRMPQKNV 226
E E+ RM +K++
Sbjct: 494 SEVSEMRLRMKEKDI 508
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/326 (29%), Positives = 163/326 (50%), Gaps = 28/326 (8%)
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM-------PRRNEVSWTVM 201
A + +++P P+V Y +I V A +L+D + R NE ++
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYP-- 116
Query: 202 INGLVENGLYEEAWELFGRMPQKNVV-----------ASTAMITGFCKQGKVDEAWTLFQ 250
L + ++ W GR +V+ A++ + GK+ EA +LF+
Sbjct: 117 --SLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFE 174
Query: 251 QIRCRDIASWNIMITGYAQNGR---GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+IR D+A+WN ++ YA + EE L LF +R ++P++L V+L +CA+L
Sbjct: 175 RIREPDLATWNTLLAAYANSEEIDSDEEVLLLF---MRMQVRPNELSLVALIKSCANLGE 231
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
+G + V+K+ + V +L+ +YSKCG + + F + SQ D+ +N +I
Sbjct: 232 FVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRG 291
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
A H + + +I+ G+ PD TF+ +S C +G +DE + +FN M YGI P
Sbjct: 292 LAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEP 351
Query: 428 RSEHYACLVDVMSRAGQLQRACEIIR 453
+ EHY CLVD++ R+G+L+ A E I+
Sbjct: 352 KVEHYGCLVDLLGRSGRLEEAEECIK 377
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 122/267 (45%), Gaps = 9/267 (3%)
Query: 135 AMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP-RR 193
A++ + G+L +A+ LF+ + P++ ++ ++ Y +E LF M R
Sbjct: 155 ALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRP 214
Query: 194 NEVSWTVMIN-----GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTL 248
NE+S +I G G++ + L + V T++I + K G + A +
Sbjct: 215 NELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVG-TSLIDLYSKCGCLSFARKV 273
Query: 249 FQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
F ++ RD++ +N MI G A +G G+E + L+ ++ G+ PD FV +AC+ L+
Sbjct: 274 FDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLV 333
Query: 309 DQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIA 366
D+G Q + ++ +G + + LV + + G + ++E + +P+ W + +
Sbjct: 334 DEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLG 393
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDG 393
+ H + + ++ + G
Sbjct: 394 SSQTHGDFERGEIALKHLLGLEFENSG 420
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 122/308 (39%), Gaps = 54/308 (17%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ ++ G + AR +F+++ D+ TWN++L AY
Sbjct: 157 VGFYANCGKLREARSLFERIREPDLATWNTLLAAY------------------------- 191
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPER-NAASYNAMISGFIKFGRLCDA----QRLFKEMPC 158
A + D +E F M R N S A+I G + K
Sbjct: 192 ---ANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLT 248
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
N T +ID Y K G ++ AR +FD M +R+ + MI GL +G +E EL+
Sbjct: 249 LNQFVGTSLIDLYSKC---GCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELY 305
Query: 219 GRMPQKNVVASTA----MITGFCKQGKVDEAWTLFQQIRC-----RDIASWNIMITGYAQ 269
+ + +V +A I+ G VDE +F ++ + + ++ +
Sbjct: 306 KSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGR 365
Query: 270 NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH--GFDSDL 327
+GR EEA +M ++P+ ++ S + + ++G + +KH G + +
Sbjct: 366 SGRLEEAEECIKKM---PVKPNATLWRSFLGSSQTHGDFERGE----IALKHLLGLEFEN 418
Query: 328 SVNNALVT 335
S N L++
Sbjct: 419 SGNYVLLS 426
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/331 (28%), Positives = 164/331 (49%), Gaps = 36/331 (10%)
Query: 129 NAASYNAMISGFIKFGRLCDAQRLFKEMPC-----PNVVSYTVMIDGYVKVKEGGGIARA 183
N +N +I G+ + G A L++EM P+ +Y +I +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTM--------- 134
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVD 243
A R E +V+I FG + + +++ + G V
Sbjct: 135 -----ADVRLGETIHSVVIRSG------------FGSL----IYVQNSLLHLYANCGDVA 173
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
A+ +F ++ +D+ +WN +I G+A+NG+ EEAL L+++M G++PD VSL +ACA
Sbjct: 174 SAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA 233
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNT 363
+ L G++ + +IK G +L +N L+ +Y++CG + +++ F + + VSW +
Sbjct: 234 KIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTS 293
Query: 364 IIAAFAQHVLYYKARSYFDQMIAV-GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
+I A + +A F M + G+ P ITF+ +L C G + E F M +
Sbjct: 294 LIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE 353
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
Y I PR EH+ C+VD+++RAGQ+++A E I+
Sbjct: 354 YKIEPRIEHFGCMVDLLARAGQVKKAYEYIK 384
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 59/287 (20%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
+Y N + ++ G++ +A +VFDKMP KD+V WNS++ + +G P+ + AL+ M
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 215
Query: 97 KNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCD 148
K + + ++++ C + L M + RN S N ++ + + GR+ +
Sbjct: 216 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 275
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
A+ LF EM N V SWT +I GL N
Sbjct: 276 AKTLFDEMVDKNSV----------------------------------SWTSLIVGLAVN 301
Query: 209 GLYEEAWELF-------GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----D 256
G +EA ELF G +P + C G V E + F+++R
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC--GMVKEGFEYFRRMREEYKIEPR 359
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
I + M+ A+ G+ ++A M MQP+ +I+ +L AC
Sbjct: 360 IEHFGCMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLLGACT 403
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+++ +N+ + ++R G + A+ +FD+M K+ V+W S++ +GF + + LF M
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 315
Query: 96 -----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGR 145
+ +++ ++ C M+ E F YF M E + M+ + G+
Sbjct: 316 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 375
Query: 146 LCDAQRLFKEMPC-PNVVSYTVMI 168
+ A K MP PNVV + ++
Sbjct: 376 VKKAYEYIKSMPMQPNVVIWRTLL 399
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 159 bits (401), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 114/423 (26%), Positives = 193/423 (45%), Gaps = 48/423 (11%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK--DVVTWNSMLTAYWHSGFPQHSRALFDAMP-MKNVV 100
I +S+ G +F+ + D V N+M+ AY G + ++F P + + +
Sbjct: 167 IHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTI 226
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGF-----IKFGRLCDAQR 151
SWN ++AG QN +EA +M E + S+ A+++ +K G+ A R
Sbjct: 227 SWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHA-R 285
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
+ K N + ++D Y K G + A
Sbjct: 286 VLKNGSYSNKFVSSGIVDVYCKC---GNMKYA---------------------------- 314
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
E A L+G N+ ++++MI G+ QGK+ EA LF + +++ W M GY
Sbjct: 315 ESAHLLYGF---GNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLR 371
Query: 272 RGEEALNLFSQMVRTGMQ-PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
+ + L L + PD L+ VS+ AC+ A ++ G++ + ++ G D +
Sbjct: 372 QPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLV 431
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
A V MYSKCG++ +E F + + D V +N +IA A H K+ +F+ M G +
Sbjct: 432 TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFK 491
Query: 391 PDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACE 450
PD ITF++LLS C G + E F M+ Y I P + HY C++D+ +A +L +A E
Sbjct: 492 PDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIE 551
Query: 451 IIR 453
++
Sbjct: 552 LME 554
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 167/351 (47%), Gaps = 53/351 (15%)
Query: 82 GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFI 141
GF H R++ + VS N +V ++ +L EA N F M ERN S+NA+I+ ++
Sbjct: 7 GFLHHIRSIKSGSTL-TAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYV 65
Query: 142 KFGRLCDAQRLFKEMPCP-NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE----- 195
KF + +A+ LF+ C ++++Y ++ G+ K G + A +F M R+ +
Sbjct: 66 KFNNVKEARELFESDNCERDLITYNTLLSGFAKTD--GCESEAIEMFGEMHRKEKDDIWI 123
Query: 196 ----VSWTVMINGLVENGLYEEAWELFGRMPQK--------------------------- 224
V+ V ++ + N Y E +L G + +
Sbjct: 124 DDFTVTTMVKLSAKLTNVFYGE--QLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCN 181
Query: 225 ----------NVVASTAMITGFCKQGKVDEAWTLF-QQIRCRDIASWNIMITGYAQNGRG 273
+ VA AMI +C++G +D+A ++F + D SWN +I GYAQNG
Sbjct: 182 IFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYE 241
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
EEAL + M G++ D+ F ++ +SL L G++ +A V+K+G S+ V++ +
Sbjct: 242 EEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGI 301
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
V +Y KCG++ +E A ++ S +++I ++ +A+ FD +
Sbjct: 302 VDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSL 352
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 138/328 (42%), Gaps = 50/328 (15%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPT-KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
N IAA+ R G+I A VF + P D ++WN+++ Y +G+ + + + +M +N
Sbjct: 197 NAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSME-ENG 255
Query: 100 VSWNAMVAGCVQN----------------------------------DMLDEAFNYFAAM 125
+ W+ G V N D+ + N A
Sbjct: 256 LKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAE 315
Query: 126 PER------NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGG 179
N S ++MI G+ G++ +A+RLF + N+V +T M GY+ +++
Sbjct: 316 SAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDS 375
Query: 180 IARARALFDAMPRRNEVSWTVMINGLVENGL---YEEAWELFGRMPQKNVVASTAMITGF 236
+ F A N VM++ L L E E+ G + ++ ++T F
Sbjct: 376 VLELARAFIA-NETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAF 434
Query: 237 C----KQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
K G V+ A +F RD +N MI G A +G ++ F M G +PD+
Sbjct: 435 VDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDE 494
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIK 320
+ F++L +AC L+ +G + + +I+
Sbjct: 495 ITFMALLSACRHRGLVLEGEKYFKSMIE 522
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 112/246 (45%), Gaps = 39/246 (15%)
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC- 254
VS ++N ++GL EA +F M ++NV + A+I + K V EA LF+ C
Sbjct: 24 VSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCE 83
Query: 255 RDIASWNIMITGYAQ-NGRGEEALNLFSQMVRTGMQP---DDLIFVSLFTACASLALLDQ 310
RD+ ++N +++G+A+ +G EA+ +F +M R DD ++ A L +
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI--------------------------- 343
G Q + +++K G D ++L+ MYSKCG
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 344 -----VDSELA--FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
+D L+ + D +SWNT+IA +AQ+ +A M G++ D +F
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSF 263
Query: 397 LSLLSV 402
++L+V
Sbjct: 264 GAVLNV 269
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 158 bits (399), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 127/215 (59%), Gaps = 1/215 (0%)
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
G V A+ +F ++ +D+ +WN +I G+A+NG+ EEAL L+++M G++PD VSL
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 96
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
+ACA + L G++ + +IK G +L +N L+ +Y++CG + +++ F + + V
Sbjct: 97 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 156
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAV-GVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
SW ++I A + +A F M + G+ P ITF+ +L C G + E F
Sbjct: 157 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 216
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
M +Y I PR EH+ C+VD+++RAGQ+++A E I+
Sbjct: 217 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIK 251
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 108/236 (45%), Gaps = 42/236 (17%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------- 224
G +A A +FD MP ++ V+W +ING ENG EEA L+ M K
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 96
Query: 225 --------------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
N+ +S ++ + + G+V+EA TLF ++ ++
Sbjct: 97 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 156
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTY-A 316
SW +I G A NG G+EA+ LF M T G+ P ++ FV + AC+ ++ +G + +
Sbjct: 157 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 216
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ ++ + + +V + ++ G + + E QP++V W T++ A H
Sbjct: 217 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVH 272
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 121/287 (42%), Gaps = 59/287 (20%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM 96
+Y N + ++ G++ +A +VFDKMP KD+V WNS++ + +G P+ + AL+ M
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNS 82
Query: 97 KNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCD 148
K + + ++++ C + L M + RN S N ++ + + GR+ +
Sbjct: 83 KGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEE 142
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
A+ LF EM N V SWT +I GL N
Sbjct: 143 AKTLFDEMVDKNSV----------------------------------SWTSLIVGLAVN 168
Query: 209 GLYEEAWELF-------GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----D 256
G +EA ELF G +P + C G V E + F+++R
Sbjct: 169 GFGKEAIELFKYMESTEGLLPCEITFVGILYACSHC--GMVKEGFEYFRRMREEYKIEPR 226
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
I + M+ A+ G+ ++A M MQP+ +I+ +L AC
Sbjct: 227 IEHFGCMVDLLARAGQVKKAYEYIKSM---PMQPNVVIWRTLLGACT 270
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQ 370
G +++VI+ GF S + V N+L+ +Y+ CG + + F + + D+V+WN++I FA+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSE 430
+ +A + + +M + G++PDG T +SLLS C + G + + M+ G+
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVGLTRNLH 125
Query: 431 HYACLVDVMSRAGQLQRA 448
L+D+ +R G+++ A
Sbjct: 126 SSNVLLDLYARCGRVEEA 143
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
+++ +N+ + ++R G + A+ +FD+M K+ V+W S++ +GF + + LF M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYME 182
Query: 96 -----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGR 145
+ +++ ++ C M+ E F YF M E + M+ + G+
Sbjct: 183 STEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQ 242
Query: 146 LCDAQRLFKEMPC-PNVVSYTVMI 168
+ A K MP PNVV + ++
Sbjct: 243 VKKAYEYIKSMPMQPNVVIWRTLL 266
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 192/421 (45%), Gaps = 60/421 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
++Y N I+ + R G + AR++FD+M +D V+WN+++ Y + L D M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
+ V V+WN + GC+ EA NY A+ N ++ R C+ +
Sbjct: 278 LSGVEASIVTWNTIAGGCL------EAGNYIGAL--------NCVVG-----MRNCNVR- 317
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
+ MI+G G + + + R S +
Sbjct: 318 ----------IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI----------- 356
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
NV ++IT + + + A+ +FQQ+ +++WN +I+G+A N
Sbjct: 357 ------------DNV--RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVN 330
R EE L +M+ +G P+ + S+ A + L G++ + ++ + + L +
Sbjct: 403 RSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILW 462
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
N+LV MY+K G I+ ++ F + D V++ ++I + + A ++F M G++
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 391 PDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACE 450
PD +T +++LS C + + E LF M H +GI R EHY+C+VD+ RAG L +A +
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARD 582
Query: 451 I 451
I
Sbjct: 583 I 583
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%)
Query: 232 MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
++T + +DEA T+ + WN++I Y +N R +E+++++ +M+ G++ D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
+ + S+ ACA+L GR + + +L V NAL++MY + G + + F
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ S+ D VSWN II + +A D+M GV +T+ ++ C AG
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 412 SMN 414
++N
Sbjct: 304 ALN 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 23/249 (9%)
Query: 23 HFLLVFAKHFS-SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS 81
H L++ + FS D R +L I +SR ++ A VF ++ + TWNS+++ + ++
Sbjct: 343 HCLVIRSCSFSHDIDNVRNSL-ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 82 GFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----- 132
+ + L M + N ++ +++ + L + + R +
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR 192
+N+++ + K G + A+R+F M + V+YT +IDGY ++ +G A A F M R
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG---EVALAWFKDMDR 518
Query: 193 R----NEVSWTVMINGLVENGLYEEAWELFGRMP-----QKNVVASTAMITGFCKQGKVD 243
+ V+ +++ + L E LF +M + + + M+ +C+ G +D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 244 EAWTLFQQI 252
+A +F I
Sbjct: 579 KARDIFHTI 587
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/421 (25%), Positives = 192/421 (45%), Gaps = 60/421 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
++Y N I+ + R G + AR++FD+M +D V+WN+++ Y + L D M
Sbjct: 218 NLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMY 277
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
+ V V+WN + GC+ EA NY A+ N ++ R C+ +
Sbjct: 278 LSGVEASIVTWNTIAGGCL------EAGNYIGAL--------NCVVG-----MRNCNVR- 317
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
+ MI+G G + + + R S +
Sbjct: 318 ----------IGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDI----------- 356
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
NV ++IT + + + A+ +FQQ+ +++WN +I+G+A N
Sbjct: 357 ------------DNV--RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNE 402
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI-KHGFDSDLSVN 330
R EE L +M+ +G P+ + S+ A + L G++ + ++ + + L +
Sbjct: 403 RSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILW 462
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
N+LV MY+K G I+ ++ F + D V++ ++I + + A ++F M G++
Sbjct: 463 NSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIK 522
Query: 391 PDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACE 450
PD +T +++LS C + + E LF M H +GI R EHY+C+VD+ RAG L +A +
Sbjct: 523 PDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARD 582
Query: 451 I 451
I
Sbjct: 583 I 583
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%)
Query: 232 MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
++T + +DEA T+ + WN++I Y +N R +E+++++ +M+ G++ D
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRAD 183
Query: 292 DLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG 351
+ + S+ ACA+L GR + + +L V NAL++MY + G + + F
Sbjct: 184 EFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFD 243
Query: 352 QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
+ S+ D VSWN II + +A D+M GV +T+ ++ C AG
Sbjct: 244 RMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIG 303
Query: 412 SMN 414
++N
Sbjct: 304 ALN 306
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 113/249 (45%), Gaps = 23/249 (9%)
Query: 23 HFLLVFAKHFS-SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHS 81
H L++ + FS D R +L I +SR ++ A VF ++ + TWNS+++ + ++
Sbjct: 343 HCLVIRSCSFSHDIDNVRNSL-ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 82 GFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----- 132
+ + L M + N ++ +++ + L + + R +
Sbjct: 402 ERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLIL 461
Query: 133 YNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR 192
+N+++ + K G + A+R+F M + V+YT +IDGY ++ +G A A F M R
Sbjct: 462 WNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG---EVALAWFKDMDR 518
Query: 193 R----NEVSWTVMINGLVENGLYEEAWELFGRMP-----QKNVVASTAMITGFCKQGKVD 243
+ V+ +++ + L E LF +M + + + M+ +C+ G +D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 244 EAWTLFQQI 252
+A +F I
Sbjct: 579 KARDIFHTI 587
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 190/399 (47%), Gaps = 44/399 (11%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM- 125
+V S+++ Y G + +F+ +P K+VV++NA ++G ++N +++ + F M
Sbjct: 163 EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMR 222
Query: 126 ----PERNAASYNAMISGF-----IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKE 176
E N ++ I+ +++GR + KE +V T +ID Y K +
Sbjct: 223 KFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG-TALIDMYSKCR- 280
Query: 177 GGGIARARALFDAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITG 235
A +F + RN +SW +I+G++ NG +E A ELF ++ + +
Sbjct: 281 --CWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKP------- 331
Query: 236 FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
D A+WN +I+G++Q G+ EA F +M+ M P
Sbjct: 332 --------------------DSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCL 371
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG--QT 353
SL +AC+ + L G++ + VIK + D+ V +L+ MY KCG + F +
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEP 431
Query: 354 SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
D V WN +I+ + +H A F+ + V P TF ++LS C G +++
Sbjct: 432 KPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGS 491
Query: 414 NLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
+F LM +YG P +EH C++D++ R+G+L+ A E+I
Sbjct: 492 QIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVI 530
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V +TA+++ + K +V +A + ++ R IAS N ++G +NG +A +F
Sbjct: 65 DVFTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDAR 124
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+G + + S+ C + + G Q + L +K GF+ ++ V +LV+MYS+CG V
Sbjct: 125 VSGSGMNSVTVASVLGGCGDI---EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWV 181
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV-RPDGITFLSLLSVC 403
+ F + +V++N I+ ++ + S F+ M P+ +TF++ ++ C
Sbjct: 182 LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC 241
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/287 (19%), Positives = 133/287 (46%), Gaps = 41/287 (14%)
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRL 152
+N++SWN++++G + N + A F + ++A++N++ISGF + G++ +A +
Sbjct: 296 RNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKF 355
Query: 153 FKEM----PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
F+ M P++ T ++ + WT+ +
Sbjct: 356 FERMLSVVMVPSLKCLTSLLSACSDI-----------------------WTLKNGKEIHG 392
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQI--RCRDIASWNIMITG 266
+ + A E +++ T++I + K G A +F + + +D WN+MI+G
Sbjct: 393 HVIKAAAE-------RDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGFDS 325
Y ++G E A+ +F + ++P F ++ +AC+ +++G Q + L+ + +G+
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKP 505
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
++ + + G + +++ Q S+P +++++ + QH+
Sbjct: 506 STEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVYSSLLGSCRQHL 552
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 4/155 (2%)
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
P+ F L +CA L + QGR +A V+K GF D+ ALV+MY K + D+
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
+ + I S N ++ ++ A F G + +T S+L C G I
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 410 DESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
+ M L L + G LV + SR G+
Sbjct: 146 EGGMQLHCLAMKS-GFEMEVYVGTSLVSMYSRCGE 179
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 126/227 (55%), Gaps = 2/227 (0%)
Query: 229 STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+ IT +CK G+ + A +F + R + SWN +I G GR EA+ +F M R+G+
Sbjct: 155 ESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGL 214
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVI--KHGFDSDLSVNNALVTMYSKCGSIVDS 346
+PDD VS+ +C L L Q + V+ K SD+ + N+L+ MY KCG + +
Sbjct: 215 EPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLA 274
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F + Q ++VSW+++I +A + +A F QM GVRP+ ITF+ +LS C
Sbjct: 275 SHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHG 334
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G ++E F +M ++ + P HY C+VD++SR GQL+ A +++
Sbjct: 335 GLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVE 381
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 45/236 (19%)
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP------------- 222
+ G AR +FD P R SW +I GL G EA E+F M
Sbjct: 164 KAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVS 223
Query: 223 ----------------------------QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC 254
+ +++ ++I + K G++D A +F+++R
Sbjct: 224 VTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQ 283
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
R++ SW+ MI GYA NG EAL F QM G++P+ + FV + +AC L+++G+ T
Sbjct: 284 RNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGK-T 342
Query: 315 YALVIKHGFDSD--LSVNNALVTMYSKCGSIVDSELAFGQTS-QPDIVSWNTIIAA 367
Y ++K F+ + LS +V + S+ G + +++ + +P+++ W ++
Sbjct: 343 YFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 25/254 (9%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
+ +T Y +G +++R +FD P + + SWNA++ G +EA F M
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 132 SYN-AMISGFIKFGRLCDAQRLFKEMPC---------PNVVSYTVMIDGYVKVKEGGGIA 181
+ M+S G L D F+ C +++ +ID Y K G +
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKC---GRMD 272
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFC 237
A +F+ M +RN VSW+ MI G NG EA E F +M + N + +++
Sbjct: 273 LASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACV 332
Query: 238 KQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
G V+E T F ++ ++ + ++ +++G+ +EA + +M M+P+
Sbjct: 333 HGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM---PMKPNV 389
Query: 293 LIFVSLFTACASLA 306
+++ L C
Sbjct: 390 MVWGCLMGGCEKFG 403
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 85/198 (42%), Gaps = 11/198 (5%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN ++ Y ++ +A+ ++ MVR+ + PD + A + G++ +++ +
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+ GF D + +T+Y K G ++ F + + + SWN II +A
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA------ 433
F M G+ PD T +S+ + C G + + L H + ++E +
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQL-----HKCVLQAKTEEKSDIMMLN 259
Query: 434 CLVDVMSRAGQLQRACEI 451
L+D+ + G++ A I
Sbjct: 260 SLIDMYGKCGRMDLASHI 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 26/276 (9%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
I + +AG AR+VFD+ P + + +WN+++ H+G + +F M +
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS------YNAMISGFIKFGRLCDAQRLF 153
+ ++ A C L AF + + N++I + K GR+ A +F
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENG 209
+EM NVVS++ MI GY G A F M R N++++ +++ V G
Sbjct: 279 EEMRQRNVVSWSSMIVGYAA---NGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGG 335
Query: 210 LYEEAWELFGRMP-----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-DIASWNIM 263
L EE F M + + ++ + G++ EA + +++ + ++ W +
Sbjct: 336 LVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCL 395
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQP-DDLIFVSL 298
+ G + G E A + MV ++P +D ++V L
Sbjct: 396 MGGCEKFGDVEMAEWVAPYMVE--LEPWNDGVYVVL 429
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 10/167 (5%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLT 76
S A H ++ AK D+ N I + + G + A +F++M ++VV+W+SM+
Sbjct: 235 SLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIV 294
Query: 77 AYWHSGFPQHSRALFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----E 127
Y +G + F M N +++ +++ CV +++E YFA M E
Sbjct: 295 GYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELE 354
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLFKEMPC-PNVVSYTVMIDGYVK 173
+ Y ++ + G+L +A+++ +EMP PNV+ + ++ G K
Sbjct: 355 PGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGGCEK 401
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 213/466 (45%), Gaps = 59/466 (12%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY-----WHSGFPQHSRALF 91
V+ N ++ + R G I A +F +M +KD+V+WN ++ Y W F +
Sbjct: 263 VFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVH 322
Query: 92 DAMPMKNVVSWNAMVAGCVQNDML---DEAFNYF--AAMPERNAASYNAMISGFIKFGRL 146
+ V+ +++ C Q L E +Y + + + NA+IS + +FG
Sbjct: 323 KGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDT 382
Query: 147 CDAQRLFKEMPCPNVVSYTVMIDGYV---------------------------------- 172
A F M +++S+ ++D +
Sbjct: 383 SAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFC 442
Query: 173 -------KVKEGGGIARARALF--DAMPRRNEVSWTVMINGLVENGLYEEAWELF-GRMP 222
KVKE G + L + P+ +++ + G E A ++F G
Sbjct: 443 INVQGIGKVKEVHGYSVKAGLLHDEEEPKLG----NALLDAYAKCGNVEYAHKIFLGLSE 498
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
++ +V+ ++++G+ G D+A LF ++ D+ +W++M+ YA++ EA+ +F +
Sbjct: 499 RRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE 558
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
+ GM+P+ + ++L CA LA L RQ + +I+ G D+ + L+ +Y+KCGS
Sbjct: 559 IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGS 617
Query: 343 IVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
+ + F ++ D+V + ++A +A H +A + M ++PD + ++L+
Sbjct: 618 LKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTA 677
Query: 403 CCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
CC AG I + + +++ + +G+ P E YAC VD+++R G+L A
Sbjct: 678 CCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDA 723
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 221/467 (47%), Gaps = 44/467 (9%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLT 76
++ R H + H + +V ++ LN+ A R + +++F +M + D V WN +LT
Sbjct: 38 TSGRALHGCVFKLGHIACSEVSKSVLNMYAKCR--RMDDCQKMFRQMDSLDPVVWNIVLT 95
Query: 77 AYWHSGFPQHSRALFDAM-----PMKNVVSWNAMVAGCVQNDMLDEAFN-------YFAA 124
S + R F AM P + V++ ++ CV+ L +++N A
Sbjct: 96 GLSVSCGRETMR-FFKAMHFADEPKPSSVTFAIVLPLCVR---LGDSYNGKSMHSYIIKA 151
Query: 125 MPERNAASYNAMISGFIKFGRLC-DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARA 183
E++ NA++S + KFG + DA F + +VVS+ +I G+ E +A A
Sbjct: 152 GLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGF---SENNMMADA 208
Query: 184 -RALFDAMPRRNEVSWTVMINGL-----------VENGLYEEAWELFGRMPQKNVVASTA 231
R+ + E ++ + N L +G ++ + Q +V +
Sbjct: 209 FRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNS 268
Query: 232 MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQP 290
+++ + + G+++EA +LF ++ +D+ SWN++I GYA N +A LF +V G + P
Sbjct: 269 LVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSP 328
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGF-DSDLSVNNALVTMYSKCGSIVDSELA 349
D + +S+ CA L L G++ ++ +++H + D SV NAL++ Y++ G + A
Sbjct: 329 DSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWA 388
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA--- 406
F S DI+SWN I+ AFA ++ + ++ + D +T LSLL C
Sbjct: 389 FSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI 448
Query: 407 GKIDE--SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
GK+ E ++ ++HD P L+D ++ G ++ A +I
Sbjct: 449 GKVKEVHGYSVKAGLLHDEEEPKLGN---ALLDAYAKCGNVEYAHKI 492
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 144/317 (45%), Gaps = 26/317 (8%)
Query: 40 ANLNIAAFSRAGNITAARQVFDKMPTK-DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKN 98
N + A+++ GN+ A ++F + + +V++NS+L+ Y +SG ++ LF M +
Sbjct: 473 GNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTD 532
Query: 99 VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP- 157
+ +W+ MV ++ +EA F + R I + + L ++
Sbjct: 533 LTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHG 592
Query: 158 ------CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
++ ++D Y K G + A ++F + RR+ V +T M+ G +G
Sbjct: 593 YIIRGGLGDIRLKGTLLDVYAKC---GSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRG 649
Query: 212 EEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRC-----RDIASWNI 262
+EA ++ M + N+ V T M+T C G + + ++ IR + +
Sbjct: 650 KEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYAC 709
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+ A+ GR ++A + +QM ++P+ I+ +L AC + +D G +++
Sbjct: 710 AVDLIARGGRLDDAYSFVTQM---PVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQA- 765
Query: 323 FDSDLSVNNALVT-MYS 338
+SD + N+ L++ MY+
Sbjct: 766 -ESDDTGNHVLISNMYA 781
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 277 LNLFSQMVR--TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
L F Q R +G D +F+ + ACAS++ L GR + V K G + V+ +++
Sbjct: 4 LRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVL 63
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFA-----QHVLYYKARSYFDQMIAVGV 389
MY+KC + D + F Q D V WN ++ + + + ++KA + D+
Sbjct: 64 NMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGRETMRFFKAMHFADE-----P 118
Query: 390 RPDGITFLSLLSVCCRAG 407
+P +TF +L +C R G
Sbjct: 119 KPSSVTFAIVLPLCVRLG 136
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 189/373 (50%), Gaps = 43/373 (11%)
Query: 85 QHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFG 144
QH ++F+ + VS V G + + L F++F + P + + +N +I GF
Sbjct: 34 QHHPSIFNHLLRFCAVS----VTGSLSHAQL--LFDHFDSDP--STSDWNYLIRGFSNSS 85
Query: 145 RLCDA-----QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWT 199
++ + L + P++ ++ + ++K ++P+ E+ +
Sbjct: 86 SPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIK-------------SIPKCLEIHGS 132
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
V+ +G +++ + +T+++ + G V+ A +F ++ RD+ S
Sbjct: 133 VIRSGFLDDA-----------------IVATSLVRCYSANGSVEIASKVFDEMPVRDLVS 175
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN+MI ++ G +AL+++ +M G+ D V+L ++CA ++ L+ G + +
Sbjct: 176 WNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIAC 235
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+S + V+NAL+ MY+KCGS+ ++ F + D+++WN++I + H +A S
Sbjct: 236 DIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAIS 295
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
+F +M+A GVRP+ ITFL LL C G + E + F +M + + P +HY C+VD+
Sbjct: 296 FFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLY 355
Query: 440 SRAGQLQRACEII 452
RAGQL+ + E+I
Sbjct: 356 GRAGQLENSLEMI 368
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 118/269 (43%), Gaps = 40/269 (14%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
+ +S G++ A +VFD+MP +D+V+WN M+ + H G + +++ M N
Sbjct: 149 VRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMG-------N 201
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS 163
V G +++ A + + A +A+ G + CD + C + V
Sbjct: 202 EGVCG--------DSYTLVALLS--SCAHVSALNMGVMLHRIACDIR-------CESCVF 244
Query: 164 YT-VMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM- 221
+ +ID Y K G + A +F+ M +R+ ++W MI G +G EA F +M
Sbjct: 245 VSNALIDMYAKC---GSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMV 301
Query: 222 ---PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRG 273
+ N + ++ G QG V E F+ + + ++ + M+ Y + G+
Sbjct: 302 ASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQL 361
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
E +L + + + D +++ +L +C
Sbjct: 362 ENSLEM---IYASSCHEDPVLWRTLLGSC 387
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 190/412 (46%), Gaps = 59/412 (14%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAM------PERNA--ASYNAMISGFIKFGRLCDA 149
+V SWN+++A ++ EA F++M P R++ + A S F F
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTH 99
Query: 150 QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENG 209
Q+ F ++ + +I Y G + AR +FD +P+RN VSWT MI G NG
Sbjct: 100 QQAFVFGYQSDIFVSSALIVMYSTC---GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNG 156
Query: 210 LYEEAWELF----------------------------GRMPQKNVVAS------------ 229
+A LF R+P K + S
Sbjct: 157 NALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDR 216
Query: 230 -----TAMITGFCK--QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
++ + K +G V A +F QI +D S+N +++ YAQ+G EA +F +
Sbjct: 217 GVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRR 276
Query: 283 MVRTGMQPDDLIFVS-LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+V+ + + I +S + A + L G+ + VI+ G + D+ V +++ MY KCG
Sbjct: 277 LVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCG 336
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ + AF + ++ SW +IA + H KA F MI GVRP+ ITF+S+L+
Sbjct: 337 RVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C AG E FN M +G+ P EHY C+VD++ RAG LQ+A ++I+
Sbjct: 397 ACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 172/380 (45%), Gaps = 64/380 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
D++ ++ I +S G + AR+VFD++P +++V+W SM+ Y +G + +LF +
Sbjct: 110 DIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 96 MKNVVSWNAMVAGCVQNDMLDEA--FNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF 153
+ +AM LD + +A A I F+ +R F
Sbjct: 170 VDENDDDDAM--------FLDSMGLVSVISACSRVPAKGLTESIHSFV-------IKRGF 214
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEE 213
V ++D Y K E GG+A AR +FD + ++ VS+ +++ ++G+ E
Sbjct: 215 DR----GVSVGNTLLDAYAKGGE-GGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 214 AWELFGRMP----------------------------------------QKNVVASTAMI 233
A+E+F R+ + +V+ T++I
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSII 329
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+CK G+V+ A F +++ +++ SW MI GY +G +AL LF M+ +G++P+ +
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYI 389
Query: 294 IFVSLFTACASLALLDQG-RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFG 351
FVS+ AC+ L +G R A+ + G + L +V + + G + + +L
Sbjct: 390 TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQR 449
Query: 352 QTSQPDIVSWNTIIAAFAQH 371
+PD + W++++AA H
Sbjct: 450 MKMKPDSIIWSSLLAACRIH 469
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 122/451 (27%), Positives = 216/451 (47%), Gaps = 47/451 (10%)
Query: 40 ANLNIAAFSRAGNITA------------------ARQVFDKMPTKDVVTWNSMLTAYWHS 81
A L I F R GN+T A +FD++P +D+ + NS L+++ S
Sbjct: 3 ACLRIGRFIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRS 62
Query: 82 GFPQHSRALF----DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SY 133
G P + ALF A P + ++ ++ C + A M ++ A S
Sbjct: 63 GNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISK 122
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR 193
A+I + K+G L D+ R+F+ + ++VS+ ++ G+++ +G A +F AM R
Sbjct: 123 TALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKG---KEALGVFAAMYRE 179
Query: 194 ----NEVSWTVMINGLVENGLYEEAWELFGRM---PQKNVVASTAMITGFCKQGKVDEAW 246
+E + + ++ + ++ ++ + + VV TAMI+ + G ++EA
Sbjct: 180 RVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAM 239
Query: 247 TLFQQIRCR-DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
++ + D N +I+G +N +EA L S+ +P+ + S C+
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSSSLAGCSDN 294
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
+ L G+Q + + +++GF SD + N L+ MY KCG IV + F +VSW ++I
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 366 AAFAQHVLYYKARSYFDQMI--AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY 423
A+A + KA F +M GV P+ +TFL ++S C AG + E F +M Y
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 424 GIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
+ P +EHY C +D++S+AG+ + EI RL
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETE---EIWRL 442
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 210/452 (46%), Gaps = 44/452 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKM------PTKDVVTWNSMLTAYWHSGFPQHSRA 89
DV N+ I G+ + + KM PT +VT+N++L Y G + +
Sbjct: 232 DVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPT--IVTYNTVLHWYCKKGRFKAAIE 289
Query: 90 LFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFI 141
L D M K +V ++N ++ +++ + + + M +R N +YN +I+GF
Sbjct: 290 LLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 142 KFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR---- 193
G++ A +L EM PN V++ +IDG++ G A +F M +
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHI---SEGNFKEALKMFYMMEAKGLTP 406
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLF 249
+EVS+ V+++GL +N ++ A + RM + V + T MI G CK G +DEA L
Sbjct: 407 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 466
Query: 250 QQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
++ DI +++ +I G+ + GR + A + ++ R G+ P+ +I+ +L C +
Sbjct: 467 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 526
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQ---PDIVSW 361
L + + Y +I G D N LVT K G + ++ E TS P+ VS+
Sbjct: 527 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
+ +I + KA S FD+M VG P T+ SLL C+ G + E+ +
Sbjct: 587 DCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL-- 644
Query: 422 DYGIPPRSEH--YACLVDVMSRAGQLQRACEI 451
+ +P + Y L+ M ++G L +A +
Sbjct: 645 -HAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/469 (24%), Positives = 193/469 (41%), Gaps = 78/469 (16%)
Query: 47 FSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----N 98
+ + G AA ++ D M +K DV T+N ++ S L M + N
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPN 337
Query: 99 VVSWNAMVAG-------CVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
V++N ++ G + + +L+E + F P N ++NA+I G I G +A +
Sbjct: 338 EVTYNTLINGFSNEGKVLIASQLLNEMLS-FGLSP--NHVTFNALIDGHISEGNFKEALK 394
Query: 152 LFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EVSWTVMIN 203
+F M P+ VSY V++DG K E AR + M R +++T MI+
Sbjct: 395 MFYMMEAKGLTPSEVSYGVLLDGLCKNAE---FDLARGFYMRMKRNGVCVGRITYTGMID 451
Query: 204 GLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGK------------------ 241
GL +NG +EA L M + ++V +A+I GFCK G+
Sbjct: 452 GLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP 511
Query: 242 -----------------VDEAWTLFQQI----RCRDIASWNIMITGYAQNGRGEEALNLF 280
+ EA +++ + RD ++N+++T + G+ EA
Sbjct: 512 NGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
M G+ P+ + F L + + + + K G +L+ K
Sbjct: 572 RCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKG 631
Query: 341 GSIVDSELAFGQT----SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
G + ++E + D V +NT++ A + KA S F +M+ + PD T+
Sbjct: 632 GHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Query: 397 LSLLSVCCRAGKIDESMNLFNLMVHDYG-IPPRSEHYACLVDVMSRAGQ 444
SL+S CR GK ++ LF G + P Y C VD M +AGQ
Sbjct: 692 TSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 739
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/455 (21%), Positives = 199/455 (43%), Gaps = 45/455 (9%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDV----VTWNSMLTAYWHSGFPQHSRALF 91
D + N+ + + +AG + A + M + + V+++ ++ Y +SG + ++F
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVF 606
Query: 92 DAMPM----KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKF 143
D M ++ +++ G + L EA + ++ AA YN +++ K
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 144 GRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIA-----RARALFDAMPRRN 194
G L A LF EM P+ +YT +I G + K IA A A + +P N
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR-KGKTVIAILFAKEAEARGNVLP--N 723
Query: 195 EVSWTVMINGLVENG------LYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTL 248
+V +T ++G+ + G + E + G P ++V + AMI G+ + GK+++ L
Sbjct: 724 KVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP--DIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 249 FQQIRCRD----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
++ ++ + ++NI++ GY++ + L+ ++ G+ PD L SL
Sbjct: 782 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICE 841
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI------VDSELAFGQTSQPDI 358
+L+ G + I G + D N L++ G I V + G + D
Sbjct: 842 SNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKD- 900
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
+ + +++ ++ + ++R +M G+ P+ ++ L++ CR G I + +
Sbjct: 901 -TCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEE 959
Query: 419 MVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
M+ PP A +V +++ G+ A ++R
Sbjct: 960 MIAHKICPPNVAESA-MVRALAKCGKADEATLLLR 993
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 147/258 (56%), Gaps = 5/258 (1%)
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
T ++ + G +A ++F MP++N V MITG G ++A +++ R +
Sbjct: 162 TALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVV 221
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SW +I GYA+ + +EA+ LFS+MV ++P+++ +++ A +L L +A
Sbjct: 222 SWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAY 281
Query: 318 VIKHGF-DSDLSVNNALVTMYSKCGSIVDSELAFGQ--TSQPDIVSWNTIIAAFAQHVLY 374
V K GF D+ V N+L+ Y+KCG I + F + + ++VSW T+I+AFA H +
Sbjct: 282 VGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMG 341
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES-MNLFNLMVHDYGIPPRSEHYA 433
+A S F M +G++P+ +T +S+L+ C G +E + FN MV++Y I P +HY
Sbjct: 342 KEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYG 401
Query: 434 CLVDVMSRAGQLQRACEI 451
CLVD++ R G+L+ A +I
Sbjct: 402 CLVDMLRRKGRLEEAEKI 419
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 124/270 (45%), Gaps = 32/270 (11%)
Query: 32 FSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
F S+ VY + + GN+ A +VFD+MP ++ VTWN M+T + G + +
Sbjct: 154 FESH-VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYN-----AMISGFIKFG-- 144
+ MP + VVSW ++ G + D EA F+ M +A N A++ G
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 145 RLCDA------QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP--RRNEV 196
++C + +R F +PC V+ + +ID Y K G I A F +P R+N V
Sbjct: 273 KMCGSVHAYVGKRGF--VPCDIRVTNS-LIDAYAKC---GCIQSAFKFFIEIPNGRKNLV 326
Query: 197 SWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAW-----T 247
SWT MI+ +G+ +EA +F M + N V +++ G +E + T
Sbjct: 327 SWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNT 386
Query: 248 LFQQIRCR-DIASWNIMITGYAQNGRGEEA 276
+ + + D+ + ++ + GR EEA
Sbjct: 387 MVNEYKITPDVKHYGCLVDMLRRKGRLEEA 416
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 198/434 (45%), Gaps = 54/434 (12%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK------ 97
I + + G T A +F +D+V+WNSM++A+ +GF ++ LF + +
Sbjct: 436 IDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKF 495
Query: 98 NVVSWNAMVAGCVQNDML----------------DEAFNYFAAMPE-RNAASYNAMISGF 140
++ + A++ C +D L AF M E R+ S+N++ISG
Sbjct: 496 SLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGC 555
Query: 141 IKFGRLCDAQRLFKEMPCPNVVSYTVM-IDGYVKVKEGGGIARARALFDAMPRRNEVSWT 199
G ++ R F+ M + + ++ + G + G+ F
Sbjct: 556 ASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCF------------ 603
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS 259
+GL L E +L +IT + + ++ A +F I ++ S
Sbjct: 604 ---HGLAIKSLRELDTQL-----------QNTLITMYGRCKDIESAVKVFGLISDPNLCS 649
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
WN +I+ +QN G E LF + ++P+++ FV L +A L G Q + +I
Sbjct: 650 WNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLI 706
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+ GF ++ V+ ALV MYS CG + F + I +WN++I+A H + KA
Sbjct: 707 RRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAME 766
Query: 380 YFDQMIAVG-VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F ++ + + P+ +F+SLLS C +G IDE ++ + M +G+ P +EH +VD+
Sbjct: 767 LFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDM 826
Query: 439 MSRAGQLQRACEII 452
+ RAG+L+ A E I
Sbjct: 827 LGRAGKLREAYEFI 840
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/424 (28%), Positives = 183/424 (43%), Gaps = 41/424 (9%)
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
P V NS+++ Y G + + +F+ + ++V+S NA++ G N M +EAF
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILN 381
Query: 124 AM-------PERNAASYNAMISGFIKF---GRLCDAQRLFKEMPCPNVVSYTVMIDGYVK 173
M P+ I G + F GR + EM + +ID Y K
Sbjct: 382 QMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGK 441
Query: 174 VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF---------GRMPQK 224
G +A LF R+ VSW MI+ +NG +A LF +
Sbjct: 442 C---GLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLS 498
Query: 225 NVVA-------STAMITG---FC---KQGKVDEAWTLFQQI-RCRDIASWNIMITGYAQN 270
V+A S ++I G C K G + A+ + + RD+ SWN +I+G A +
Sbjct: 499 TVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASS 558
Query: 271 GRGEEALNLFSQMVRTGMQPDDLI-FVSLFTACASLALLDQGRQTYALVIKHGFDSDLSV 329
G E+L F M R G DLI + +A +L L+ QGR + L IK + D +
Sbjct: 559 GHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQL 618
Query: 330 NNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
N L+TMY +C I + FG S P++ SWN +I+A +Q+ R F + +
Sbjct: 619 QNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQN---KAGREVFQLFRNLKL 675
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
P+ ITF+ LLS + G M ++ G A LVD+ S G L+
Sbjct: 676 EPNEITFVGLLSASTQLGSTSYGMQAHCHLIRR-GFQANPFVSAALVDMYSSCGMLETGM 734
Query: 450 EIIR 453
++ R
Sbjct: 735 KVFR 738
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 165/372 (44%), Gaps = 54/372 (14%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
+D+ T + +LT Y +G S LFD + K+V+ WN+M+ QN A F M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 126 PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV--------MIDGYVKVKEG 177
+ + + R + C + + V +++ Y K G
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAK---G 236
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM---------------- 221
++ A +F M R+ VSW ++ + NG ++ + F M
Sbjct: 237 ENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVI 296
Query: 222 -------------------------PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
P+ +V ++I+ + K G + A T+F+++ CRD
Sbjct: 297 SACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRD 356
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTG-MQPDDLIFVSLFTACASLALLDQGRQTY 315
+ S N ++ G+A NG EEA + +QM +QPD VS+ + C L+ +GR +
Sbjct: 357 VISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVH 416
Query: 316 ALVIKHGFDSD-LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
++ S L V N+++ MY KCG +EL F T+ D+VSWN++I+AF+Q+
Sbjct: 417 GYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFT 476
Query: 375 YKARSYFDQMIA 386
+KA++ F ++++
Sbjct: 477 HKAKNLFKEVVS 488
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 170/376 (45%), Gaps = 40/376 (10%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP----MKNVVSW 102
+++ N+++A VF M +D+V+WN+++T +G P+ S F +M + V++
Sbjct: 233 YAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTF 292
Query: 103 NAMVAGC--VQNDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDAQRLFKEM 156
+ +++ C ++ L E+ + PE + + N++IS + K G A+ +F+E+
Sbjct: 293 SCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEEL 352
Query: 157 PCPNVVSYTVMIDGYVK---VKEGGGIARARALFDAMPRRNEVSWTVMINGLV------E 207
C +V+S +++G+ +E GI D + + +++ V I +
Sbjct: 353 VCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI--QPDIATVVSITSICGDLSFSR 410
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGY 267
G + + M + + ++I + K G +A LF+ RD+ SWN MI+ +
Sbjct: 411 EGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAF 470
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+QNG +A NLF ++V S F+ LA+L + +L+
Sbjct: 471 SQNGFTHKAKNLFKEVVSE-------YSCSKFSLSTVLAILTSCDSSDSLIF-------- 515
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQP-DIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
++ K G + + L S+ D+ SWN++I+ A + ++ F M
Sbjct: 516 --GKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSR 573
Query: 387 VG-VRPDGITFLSLLS 401
G +R D IT L +S
Sbjct: 574 EGKIRHDLITLLGTIS 589
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 104/206 (50%), Gaps = 1/206 (0%)
Query: 224 KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQM 283
+++ S+ ++T + + G++ + LF +++ +D+ WN MIT QNGR A+ LF +M
Sbjct: 120 QDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEM 179
Query: 284 VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSI 343
+ G + D + +A +SL L + + L I+ G D S+ NAL+ +Y+K ++
Sbjct: 180 IHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENL 239
Query: 344 VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC 403
+E F DIVSWNTI+ + K+ YF M G D +TF ++S C
Sbjct: 240 SSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISAC 299
Query: 404 CRAGKIDESMNLFNLMVHDYGIPPRS 429
++ +L L++ G P +
Sbjct: 300 SSIEELTLGESLHGLVIKS-GYSPEA 324
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH 371
R + +K G DL+ ++ L+T Y + G +V S F + + D++ WN++I A Q+
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 372 VLYYKARSYFDQMIAVGVRPD 392
Y A F +MI G D
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFD 187
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 128/224 (57%), Gaps = 1/224 (0%)
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
A++T + K G ++ A +F ++ + I +WN +++G+ QNG +EA+ +F QM +G +P
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
D FVSL +ACA + G + +I G D ++ + AL+ +YS+CG + + F
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI-AVGVRPDGITFLSLLSVCCRAGKI 409
+ + ++ +W +I+A+ H +A F++M G P+ +TF+++LS C AG +
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 410 DESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+E +++ M Y + P EH+ C+VD++ RAG L A + I
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIH 370
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 9/226 (3%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
T +IT C + LF + D +N +I ++ + + +M+ + +
Sbjct: 45 TKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVS 104
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
P + F S+ +CA L+ L G+ + + GF D V ALVT YSKCG + +
Sbjct: 105 PSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQV 164
Query: 350 FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
F + + IV+WN++++ F Q+ L +A F QM G PD TF+SLLS C + G +
Sbjct: 165 FDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAV 224
Query: 410 DESMNLFNLMVHDY----GIPPRSEHYACLVDVMSRAGQLQRACEI 451
VH Y G+ + L+++ SR G + +A E+
Sbjct: 225 S-----LGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREV 265
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 120/254 (47%), Gaps = 21/254 (8%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
D +++T Y G + +R +FD MP K++V+WN++V+G QN + DEA F M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 127 ER----NAASYNAMISGFIKFGRLCDA----QRLFKEMPCPNVVSYTVMIDGYVKVKEGG 178
E ++A++ +++S + G + Q + E NV T +I+ Y + G
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRC---G 257
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM-----PQKNVVASTAMI 233
+ +AR +FD M N +WT MI+ +G ++A ELF +M P N V A++
Sbjct: 258 DVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVL 317
Query: 234 TGFCKQGKVDEAWTLFQQIR-----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+ G V+E ++++++ + M+ + G +EA Q+ TG
Sbjct: 318 SACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGK 377
Query: 289 QPDDLIFVSLFTAC 302
++ ++ AC
Sbjct: 378 ATAPALWTAMLGAC 391
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 132/225 (58%), Gaps = 8/225 (3%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
T ++ + K G + A+ LF ++ RD+ASWN +I G R EA+ L+ +M G++
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIR 207
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD-LSVNNALVTMYSKCGSIVDSEL 348
++ V+ AC+ L + +G + HG+ +D + V+NA + MYSKCG + +
Sbjct: 208 RSEVTVVAALGACSHLGDVKEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 349 AFGQ-TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
F Q T + +V+WNT+I FA H ++A FD++ G++PD +++L+ L+ C AG
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAG 322
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
++ +++FN M G+ +HY C+VD++SRAG+L+ A +II
Sbjct: 323 LVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDII 366
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 178/394 (45%), Gaps = 27/394 (6%)
Query: 21 HTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWH 80
+HFL A HF S + L A S G+++ A Q+F +P WN+++ +
Sbjct: 23 QSHFLT--AGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAG 80
Query: 81 SGFPQHSRALFDAMPMK----------NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNA 130
S P + + + +M + + ++ + + C + + A + R
Sbjct: 81 SSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARA-LCSSAMDQLHCQINRRG 139
Query: 131 ASYNAMI-----SGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARA 185
S ++++ + K G L A +LF EMP +V S+ +I G V G + A
Sbjct: 140 LSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS---GNRASEAME 196
Query: 186 LFDAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
L+ M RR+EV+ + G +E +F NV+ S A I + K G
Sbjct: 197 LYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGF 256
Query: 242 VDEAWTLFQQIRCRD-IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
VD+A+ +F+Q + + +WN MITG+A +G AL +F ++ G++PDD+ +++ T
Sbjct: 257 VDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALT 316
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIV 359
AC L++ G + + G + ++ +V + S+ G + ++ ++ + PD V
Sbjct: 317 ACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPV 376
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
W +++ A + A ++ +GV DG
Sbjct: 377 LWQSLLGASEIYSDVEMAEIASREIKEMGVNNDG 410
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 11/198 (5%)
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT------ACASLALLDQGRQ 313
WN +I G+A + A + + M++ + V T ACA Q
Sbjct: 71 WNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQ 130
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ + + G +D + L+ YSK G ++ + F + D+ SWN +IA
Sbjct: 131 LHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNR 190
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
+A + +M G+R +T ++ L C G + E N+F+ +D I +
Sbjct: 191 ASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAA--- 247
Query: 434 CLVDVMSRAGQLQRACEI 451
+D+ S+ G + +A ++
Sbjct: 248 --IDMYSKCGFVDKAYQV 263
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/431 (27%), Positives = 196/431 (45%), Gaps = 79/431 (18%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKMP--TKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
Y +N ++ +G + A+++FD++P KD V W ++L+++ G +S LF M
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 96 MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
K V VS + C + + L FA A + S ++C+A
Sbjct: 104 RKRVEIDDVSVVCLFGVCAKLEDLG-----FAQQGHGVAVKMGVLTSV-----KVCNA-- 151
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
++D Y K G ++ + +F+ + ++ VSWTV+++ +V+
Sbjct: 152 ---------------LMDMYGKC---GLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGL 193
Query: 212 EEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
E E+F MP++N VA W +M+ GY G
Sbjct: 194 ERGREVFHEMPERNAVA-------------------------------WTVMVAGYLGAG 222
Query: 272 RGEEALNLFSQMV-RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH--------G 322
E L L ++MV R G + + S+ +ACA L GR + +K
Sbjct: 223 FTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEAS 282
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
+D D+ V ALV MY+KCG+I S F + ++V+WN + + A H F
Sbjct: 283 YD-DVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFP 341
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
QMI V+PD +TF ++LS C +G +DE F+ + YG+ P+ +HYAC+VD++ RA
Sbjct: 342 QMIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRA 399
Query: 443 GQLQRACEIIR 453
G ++ A ++R
Sbjct: 400 GLIEEAEILMR 410
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 17/146 (11%)
Query: 26 LVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
++ + S DV + +++ GNI ++ VF M ++VVTWN++ SG
Sbjct: 275 MMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALF-----SGLAM 329
Query: 86 H--SRALFDAMP--MKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASY 133
H R + D P ++ V +++ A+++ C + ++DE + F ++ E Y
Sbjct: 330 HGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHY 389
Query: 134 NAMISGFIKFGRLCDAQRLFKEMPCP 159
M+ + G + +A+ L +EMP P
Sbjct: 390 ACMVDLLGRAGLIEEAEILMREMPVP 415
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 121/222 (54%), Gaps = 1/222 (0%)
Query: 232 MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVR-TGMQP 290
+I K G+ A + + +++ +WN+MI GY +N + EEAL M+ T ++P
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
+ F S ACA L L + ++L+I G + + +++ALV +Y+KCG I S F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
+ D+ WN +I FA H L +A F +M A V PD ITFL LL+ C G ++
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 411 ESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
E F LM + I P+ EHY +VD++ RAG+++ A E+I
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELI 325
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 45/251 (17%)
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
P V + ++I+ +K+ E G A+ + +N ++W +MI G V N YEEA +
Sbjct: 96 PGVCNINLIIESLMKIGESG---LAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL 152
Query: 219 GRM-------PQK---------------------------------NVVASTAMITGFCK 238
M P K N + S+A++ + K
Sbjct: 153 KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212
Query: 239 QGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
G + + +F ++ D++ WN MITG+A +G EA+ +FS+M + PD + F+ L
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGL 272
Query: 299 FTACASLALLDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQP 356
T C+ LL++G++ + L+ + L A+V + + G + ++ EL +P
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP 332
Query: 357 DIVSWNTIIAA 367
D+V W +++++
Sbjct: 333 DVVIWRSLLSS 343
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 97 KNVVSWNAMVAGCVQNDMLDEAFNYFAAM-----PERNAASYNAMISGFIKFGRLCDAQR 151
+NV++WN M+ G V+N +EA M + N S+ + ++ + G L A+
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 152 LFKEMPCP----NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-WTVMINGLV 206
+ M N + + ++D Y K G I +R +F ++ +RN+VS W MI G
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKC---GDIGTSREVFYSV-KRNDVSIWNAMITGFA 242
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGF---CKQ-GKVDEAWTLFQQIRCR-----DI 257
+GL EA +F M ++V + G C G ++E F + R +
Sbjct: 243 THGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKL 302
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
+ M+ + GR +EA L M ++PD +I+ SL ++
Sbjct: 303 EHYGAMVDLLGRAGRVKEAYELIESM---PIEPDVVIWRSLLSS 343
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
+ +++ G+I +R+VF + DV WN+M+T + G + +F M ++V
Sbjct: 207 VDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDS 266
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQRLFK 154
+++ ++ C +L+E YF M R Y AM+ + GR+ +A L +
Sbjct: 267 ITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIE 326
Query: 155 EMPC-PNVVSYTVMI 168
MP P+VV + ++
Sbjct: 327 SMPIEPDVVIWRSLL 341
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 196/430 (45%), Gaps = 60/430 (13%)
Query: 28 FAKH---FSSYDVYRANLNIAAFSRAGNITAARQVFD---KMPTKDVVTWNSMLTAYWHS 81
+ KH F++ ++ LN+ SR RQV K+ +++ +S++ Y
Sbjct: 174 YVKHGIRFTNERMFVCLLNLC--SRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQC 231
Query: 82 GFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMI 137
G + FD M K+V+SW A+++ C + +A F M N + +++
Sbjct: 232 GELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSIL 291
Query: 138 SGF-----IKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR 192
++FGR + + K M +V T ++D Y K G I+ R +FD M
Sbjct: 292 KACSEEKALRFGRQVHSL-VVKRMIKTDVFVGTSLMDMYAKC---GEISDCRKVFDGMSN 347
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST--------------AMITG--- 235
RN V+WT +I G EEA LF M +++++A+ A++ G
Sbjct: 348 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 407
Query: 236 ----------------------FCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRG 273
+CK G+ +A+ + QQ+ RD+ SW MI+G + G
Sbjct: 408 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 467
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
EAL+ +M++ G++P+ + S ACA+ L GR +++ K+ S++ V +AL
Sbjct: 468 SEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSAL 527
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
+ MY+KCG + ++ F + ++VSW +I +A++ +A +M A G D
Sbjct: 528 IHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDD 587
Query: 394 ITFLSLLSVC 403
F ++LS C
Sbjct: 588 YIFATILSTC 597
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 175/381 (45%), Gaps = 54/381 (14%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
N+++++ G ++R +FD+MP KN V+W AM+ G ++ + DEAF F +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIR 180
Query: 132 SYNAMISGFIKFGRLCDAQRLFK----------EMPCPNVVSYTVMIDGYVKVKEGGGIA 181
N + F+ LC + F+ ++ N++ + ++ Y + E
Sbjct: 181 FTNERM--FVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSAL 238
Query: 182 RARALFDAMPRRNEVSWTVMI-------NGLVENGLY----------------------- 211
RA FD M ++ +SWT +I +G+ G++
Sbjct: 239 RA---FDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACS 295
Query: 212 EEAWELFGR---------MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNI 262
EE FGR M + +V T+++ + K G++ + +F + R+ +W
Sbjct: 296 EEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTS 355
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I +A+ G GEEA++LF M R + ++L VS+ AC S+ L G++ +A +IK+
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
+ ++ + + LV +Y KCG D+ Q D+VSW +I+ + +A +
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 475
Query: 383 QMIAVGVRPDGITFLSLLSVC 403
+MI GV P+ T+ S L C
Sbjct: 476 EMIQEGVEPNPFTYSSALKAC 496
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 128/271 (47%), Gaps = 39/271 (14%)
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF------------------- 218
G + AR +FD+MP +N V+WT MI+G ++ GL +EA+ LF
Sbjct: 131 GDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCL 190
Query: 219 ------------GRMPQKNVV--------ASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
GR N+V ++++ + + G++ A F + +D+
Sbjct: 191 LNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVI 250
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
SW +I+ ++ G G +A+ +F M+ P++ S+ AC+ L GRQ ++LV
Sbjct: 251 SWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLV 310
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+K +D+ V +L+ MY+KCG I D F S + V+W +IIAA A+ +A
Sbjct: 311 VKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAI 370
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
S F M + + +T +S+L C G +
Sbjct: 371 SLFRIMKRRHLIANNLTVVSILRACGSVGAL 401
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 140/302 (46%), Gaps = 15/302 (4%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAY 78
R H L+V K DV+ + +++ G I+ R+VFD M ++ VTW S++ A+
Sbjct: 303 GRQVHSLVV--KRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAH 360
Query: 79 WHSGFPQHSRALFDAMPMKNVVSWNAMV------AGCVQNDMLDEAFN--YFAAMPERNA 130
GF + + +LF M +++++ N V G V +L + + E+N
Sbjct: 361 AREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNV 420
Query: 131 ASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKV-KEGGGIARARALFDA 189
+ ++ + K G DA + +++P +VVS+T MI G + E + + +
Sbjct: 421 YIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE 480
Query: 190 MPRRNEVSWTVMINGLV--ENGLYEEAWELFGRMPQ--KNVVASTAMITGFCKQGKVDEA 245
N +++ + E+ L + + NV +A+I + K G V EA
Sbjct: 481 GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEA 540
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+ +F + +++ SW MI GYA+NG EAL L +M G + DD IF ++ + C +
Sbjct: 541 FRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Query: 306 AL 307
L
Sbjct: 601 EL 602
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
+A +F +I D+ W++++ GY + G G E L +F +M+ G++PD+ + TACA
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA 229
Query: 304 SLALLDQGRQTYALVIKHGF-DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
+ L QG+ + V K + +SD+ V ALV MY+KCG I + F + ++ ++ SW
Sbjct: 230 QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWA 289
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAV-GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
+I +A + KA + D++ G++PD + L +L+ C G ++E + M
Sbjct: 290 ALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEA 349
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
YGI P+ EHY+C+VD+M RAG+L A ++I
Sbjct: 350 RYGITPKHEHYSCIVDLMCRAGRLDDALDLIE 381
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 143/356 (40%), Gaps = 56/356 (15%)
Query: 72 NSMLTAYWH----SGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE 127
+ +LTA+ H + ++ ++FD++ + N ++ M+ C ++ YF M +
Sbjct: 47 SKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVK 106
Query: 128 RNAASYNAMISGFIKFGRLCDAQRLF---KEMPCPNVVSYTVMIDGYVKVK------EGG 178
F C F K++ C V + + DG+V+ E
Sbjct: 107 EEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDK 166
Query: 179 GIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRM----------------- 221
+ AR +FD +P+ + V W V++NG V GL E E+F M
Sbjct: 167 LLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALT 226
Query: 222 -----------------------PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
+ +V TA++ + K G ++ A +F+++ R++
Sbjct: 227 ACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVF 286
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGRQTYA- 316
SW +I GYA G ++A ++ R G++PD ++ + + ACA L++GR
Sbjct: 287 SWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLEN 346
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ ++G + +V + + G + D+ +L +P W ++ H
Sbjct: 347 MEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTH 402
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 8/237 (3%)
Query: 223 QKNVVASTAMITGFCKQGKVDE----AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
+N A + ++T F +++ A ++F I + ++ MI +++ + L
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 279 LFSQMVRT---GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG-FDSDLSVNNALV 334
F MV+ + P L F L AC G+Q + V+K+G F SD V ++
Sbjct: 100 YFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVL 159
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
+Y + + D+ F + QPD+V W+ ++ + + L + F +M+ G+ PD
Sbjct: 160 RIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEF 219
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ + L+ C + G + + + + I LVD+ ++ G ++ A E+
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEV 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 107/259 (41%), Gaps = 38/259 (14%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDML 115
AR+VFD++P DVV W+ ++ Y G +F M +V G ++
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEM----------LVRGIEPDEF- 219
Query: 116 DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK 175
A + A + I F+K R ++ +V T ++D Y K
Sbjct: 220 -SVTTALTACAQVGALAQGKWIHEFVKKKRWIES----------DVFVGTALVDMYAKC- 267
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM--- 232
G I A +F+ + RRN SW +I G G ++A R+ +++ + ++
Sbjct: 268 --GCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLL 325
Query: 233 -ITGFCKQGK-VDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVR 285
+ C G ++E T+ + + R ++ ++ + GR ++AL+L +M
Sbjct: 326 GVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKM-- 383
Query: 286 TGMQPDDLIFVSLFTACAS 304
M+P ++ +L C +
Sbjct: 384 -PMKPLASVWGALLNGCRT 401
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 212/453 (46%), Gaps = 47/453 (10%)
Query: 13 PTPSSTARHTHFLL-----VFAKHFSSYDV------YRANLN--IAAFSRAGNITAARQV 59
P P + +H H L+ + + F +Y V +R++ N ++ + G + A +
Sbjct: 19 PDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDI 78
Query: 60 FDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-------NVVSWNAMVAG 108
MP DV+++NS++ + +G + + + +++ ++VS+N++ G
Sbjct: 79 VHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNG 138
Query: 109 CVQNDMLDEAFNYFAAMPE---RNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNV 161
+ MLDE F Y M + N +Y+ I F K G L A + F M PNV
Sbjct: 139 FSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNV 198
Query: 162 VSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVSWTVMINGLVENGLYEEAWEL 217
V++T +IDGY K G + A +L+ M R N V++T +I+G + G + A E+
Sbjct: 199 VTFTCLIDGYCK---AGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEM 255
Query: 218 FGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQ 269
+ RM + N + T +I GF ++G D A ++ + DI ++ ++I+G
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 270 NGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSV 329
NG+ +EA + M ++ + PD +IF ++ A + Y +I+ GF+ D+
Sbjct: 316 NGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVA 375
Query: 330 NNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
+ ++ +K G + ++ + F D++ + +I A + + + F ++ G+
Sbjct: 376 LSTMIDGIAKNGQLHEAIVYFCIEKANDVM-YTVLIDALCKEGDFIEVERLFSKISEAGL 434
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
PD + S ++ C+ G + ++ L MV +
Sbjct: 435 VPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQE 467
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 9/185 (4%)
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
+L + +V G P F S+ + L + + + G + D+ N+L+
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLID 99
Query: 336 MYSKCGSIVDSELAF-------GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
+ + G I + L G +PDIVS+N++ F++ + + Y M+
Sbjct: 100 GHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC- 158
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
P+ +T+ + + C++G++ ++ F+ M D + P + CL+D +AG L+ A
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRD-ALSPNVVTFTCLIDGYCKAGDLEVA 217
Query: 449 CEIIR 453
+ +
Sbjct: 218 VSLYK 222
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 93/200 (46%), Gaps = 7/200 (3%)
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CASLALLDQGRQTYA 316
+S+N +++ + G+ + A ++ M R G +PD + + SL C + + +
Sbjct: 57 SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116
Query: 317 LVIKHGF--DSDLSVNNALVTMYSKCGSIVDSELAFG---QTSQPDIVSWNTIIAAFAQH 371
L HGF D+ N+L +SK + + + G + P++V+++T I F +
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKS 176
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
A F M + P+ +TF L+ C+AG ++ +++L+ M +
Sbjct: 177 GELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM-RRVRMSLNVVT 235
Query: 432 YACLVDVMSRAGQLQRACEI 451
Y L+D + G++QRA E+
Sbjct: 236 YTALIDGFCKKGEMQRAEEM 255
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/446 (27%), Positives = 200/446 (44%), Gaps = 69/446 (15%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRA 89
S+D+Y + I F R ++ A + KM +VT S+L + Q + +
Sbjct: 111 SHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS 170
Query: 90 LFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFI 141
L D+M + NVV +N ++ G +N L+ A F M ++ +A +YN +ISG
Sbjct: 171 LVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLS 230
Query: 142 KFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR---- 193
GR DA RL ++M PNV+ +T +ID +VK G + AR L+ M RR
Sbjct: 231 NSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK---EGNLLEARNLYKEMIRRSVVP 287
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLF 249
N ++ +ING +G +A +F M K +VV +ITGFCK +V++ LF
Sbjct: 288 NVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLF 347
Query: 250 QQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
++ + D ++N +I GY Q G+ A +F++MV G+ PD ++ ++ C
Sbjct: 348 CEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD-IVTYNILLDC--- 403
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
L + G+ ALV+ SE+ DI+++N II
Sbjct: 404 -LCNNGKIEKALVMVEDLQK--------------------SEM------DVDIITYNIII 436
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+ +A F + GV+PD I +++++S CR G E+ L M D +
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFM 496
Query: 426 PPR-------SEHYACLVDVMSRAGQ 444
P +HY L + +A
Sbjct: 497 PSERIYDETLRDHYTSLSAELIKAAH 522
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 19/272 (6%)
Query: 192 RRNEVSWTVMINGLVENGLYEEAWEL------FGRMPQKNVVASTAMITGFCKQGKVDEA 245
R + V+ ++NG + ++EA L FG +P NVV +I G CK ++ A
Sbjct: 146 RPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVP--NVVIYNTVINGLCKNRDLNNA 203
Query: 246 WTLF-----QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
+F + IR D ++N +I+G + +GR +A L MV+ + P+ + F +L
Sbjct: 204 LEVFYCMEKKGIRA-DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 262
Query: 301 ACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF----GQTSQP 356
L + R Y +I+ ++ N+L+ + G + D++ F + P
Sbjct: 263 TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
D+V++NT+I F + F +M G+ D T+ +L+ C+AGK++ + +F
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 417 NLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
N MV D G+ P Y L+D + G++++A
Sbjct: 383 NRMV-DCGVSPDIVTYNILLDCLCNNGKIEKA 413
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 133/242 (54%), Gaps = 2/242 (0%)
Query: 214 AWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-DIASWNIMITGYAQNGR 272
A +LF +PQ+N V AMI+ + GKV EA L++ + + +S+N +I G
Sbjct: 102 ARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTED 161
Query: 273 GE-EALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
G A+ + +M+ +P+ + ++L +AC+++ ++ ++ ++ + + +
Sbjct: 162 GSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKS 221
Query: 332 ALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRP 391
LV Y +CGSIV +L F D+V+W+++I+A+A H A F +M V P
Sbjct: 222 GLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTP 281
Query: 392 DGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
D I FL++L C AG DE++ F M DYG+ +HY+CLVDV+SR G+ + A ++
Sbjct: 282 DDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKV 341
Query: 452 IR 453
I+
Sbjct: 342 IQ 343
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 133/281 (47%), Gaps = 37/281 (13%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP-MKNVVSWNAM 105
+ + +++ AR++FD++P ++ V WN+M++ Y H G + + L++AM M N S+NA+
Sbjct: 93 YGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAI 152
Query: 106 VAGCV-QNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCDAQRLFKEMPCPN 160
+ G V D A ++ M E N + A++S G A RL KE+ +
Sbjct: 153 IKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIG----AFRLIKEI---H 205
Query: 161 VVSYTVMIDGYVKVKEG--------GGIARARALFDAMPRRNEVSWTVMINGLVENGLYE 212
++ +I+ + ++K G G I + +FD+M R+ V+W+ +I+ +G E
Sbjct: 206 SYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAE 265
Query: 213 EAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIR-------CRDIASWN 261
A + F M V +A ++ G DEA F++++ +D ++
Sbjct: 266 SALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKD--HYS 323
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
++ ++ GR EEA + M +P + +L AC
Sbjct: 324 CLVDVLSRVGRFEEAYKVIQAMPE---KPTAKTWGALLGAC 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 47/232 (20%)
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP-DDLIFVSLFTACASLALLDQGR 312
C + S ++ YA G E+ALNLF QM + P D +F +CA+ G
Sbjct: 9 CTKLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGG 68
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQH- 371
+A +K F S+ V AL+ MY KC S+ + F + Q + V WN +I+ +
Sbjct: 69 SVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCG 128
Query: 372 ------VLY--------------------------YKARSYFDQMIAVGVRPDGITFLSL 399
LY Y+A ++ +MI +P+ IT L+L
Sbjct: 129 KVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLAL 188
Query: 400 LSVCCRAGKIDESMNLFNLM--VHDYG----IPPRSEHYACLVDVMSRAGQL 445
+S C G F L+ +H Y I P + + LV+ R G +
Sbjct: 189 VSACSAIGA-------FRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSI 233
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 20/201 (9%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV---- 99
+ A+ R G+I + VFD M +DVV W+S+++AY G + + F M + V
Sbjct: 224 VEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDD 283
Query: 100 VSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGFIKFGRLCDAQRLFK 154
+++ ++ C + DEA YF M + Y+ ++ + GR +A ++ +
Sbjct: 284 IAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQ 343
Query: 155 EMP-CPNVVSYTVMID-----GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
MP P ++ ++ G +++ E IA AR L P N ++ ++ +
Sbjct: 344 AMPEKPTAKTWGALLGACRNYGEIELAE---IA-ARELLMVEP-ENPANYVLLGKIYMSV 398
Query: 209 GLYEEAWELFGRMPQKNVVAS 229
G EEA L +M + V S
Sbjct: 399 GRQEEAERLRLKMKESGVKVS 419
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 128/233 (54%), Gaps = 6/233 (2%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V + +I + G +D A +F ++ R + SWN MI + G + AL LF +M
Sbjct: 185 DVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ 244
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH---GFDSDLSVNNALVTMYSKCG 341
R+ +PD S+ +ACA L L G +A +++ D+ V N+L+ MY KCG
Sbjct: 245 RS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCG 303
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI--AVGVRPDGITFLSL 399
S+ +E F + D+ SWN +I FA H +A ++FD+M+ VRP+ +TF+ L
Sbjct: 304 SLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGL 363
Query: 400 LSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
L C G +++ F++MV DY I P EHY C+VD+++RAG + A +++
Sbjct: 364 LIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMV 416
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 84/170 (49%), Gaps = 3/170 (1%)
Query: 242 VDEAWTLFQQIRCRDIASWNIMITGYAQN-GRGEEALNLFSQMVRTG-MQPDDLIFVSLF 299
V+ A+ +F I WN +I A + R EEA L+ +M+ G PD F +
Sbjct: 99 VNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVL 158
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
ACA + +G+Q + ++KHGF D+ VNN L+ +Y CG + + F + + +V
Sbjct: 159 KACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLV 218
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
SWN++I A + Y A F +M PDG T S+LS C G +
Sbjct: 219 SWNSMIDALVRFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSL 267
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 113/277 (40%), Gaps = 58/277 (20%)
Query: 17 STARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLT 76
S + H +V KH DVY N I + G + AR+VFD+MP + +V+WNSM+
Sbjct: 168 SEGKQVHCQIV--KHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMID 225
Query: 77 AYWHSGFPQHSRALF---------DAMPMKNVVS------------W------------- 102
A G + LF D M++V+S W
Sbjct: 226 ALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDV 285
Query: 103 -------NAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLF-- 153
N+++ + L A F M +R+ AS+NAMI GF GR +A F
Sbjct: 286 AMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDR 345
Query: 154 ----KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVS-----WTVMING 204
+E PN V++ ++ + G + + R FD M R + + +++
Sbjct: 346 MVDKRENVRPNSVTFVGLL---IACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDL 402
Query: 205 LVENGLYEEAWELFGRMPQK-NVVASTAMITGFCKQG 240
+ G EA ++ MP K + V +++ CK+G
Sbjct: 403 IARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKG 439
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 210/466 (45%), Gaps = 60/466 (12%)
Query: 43 NIAAFSRAGNI-TAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV-- 99
+ F A N+ A+ + + + WN ++ +Y + + A + M K +
Sbjct: 83 KLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRP 142
Query: 100 --VSWNAMVAGCVQNDMLDEAFNYFA----AMPERNAASY--NAMISGFIKFGRLCDAQR 151
++ +++ C + LD AF + ++ Y NA+IS + +F + A+R
Sbjct: 143 DAFTYPSVLKAC--GETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARR 200
Query: 152 LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRRNEVSWTVMINGLVE 207
LF M + VS+ +I+ Y G + A LFD M + ++W ++ G ++
Sbjct: 201 LFDRMFERDAVSWNAVINCYA---SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQ 257
Query: 208 NGLYEEAWELFGRM--------PQKNVVASTA---------------------------- 231
G Y A L RM P ++ A
Sbjct: 258 TGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNV 317
Query: 232 ---MITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
+IT + K + A +F+Q + +WN +I+GYAQ + EEA +L +M+ G
Sbjct: 318 RNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGF 377
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN-NALVTMYSKCGSIVDSE 347
QP+ + S+ CA +A L G++ + +++ D ++ N+LV +Y+K G IV ++
Sbjct: 378 QPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAK 437
Query: 348 LAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAG 407
S+ D V++ ++I + A + F +M G++PD +T +++LS C +
Sbjct: 438 QVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSK 497
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ E LF M +YGI P +H++C+VD+ RAG L +A +II
Sbjct: 498 LVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 168/398 (42%), Gaps = 65/398 (16%)
Query: 33 SSY--DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRAL 90
SSY +Y N I+ + R N+ AR++FD+M +D V+WN+++ Y G + L
Sbjct: 173 SSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFEL 232
Query: 91 FDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN---AASYNAMISGFIKF 143
FD M +V++WN + GC+Q A + M RN + AMI G +K
Sbjct: 233 FDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRM--RNFPTSLDPVAMIIG-LKA 289
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDG--------YVKVKEGGGIARARALFDAMPRRNE 195
L A RL KE+ + S ID Y K K+ + A +F +
Sbjct: 290 CSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKD---LRHALIVFRQTEENSL 346
Query: 196 VSWTVMINGLVENGLYEEAWELFGRM------PQKNVVAS-------------------- 229
+W +I+G + EEA L M P +AS
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 230 --------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEE 275
+++ + K GK+ A + + RD ++ +I GY G G
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGV 466
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY-ALVIKHGFDSDLSVNNALV 334
AL LF +M R+G++PD + V++ +AC+ L+ +G + + + ++G L + +V
Sbjct: 467 ALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMV 526
Query: 335 TMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+Y + G + + ++ +P +W T++ A H
Sbjct: 527 DLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIH 564
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 268 AQNGRGEEALNLFS--QMVRTGMQPDDLIF---VSLFTACASLALLDQGRQTYALVIKHG 322
A +G +A FS ++ + DDL+ SL +AC + G Q +A I G
Sbjct: 14 ASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHCISSG 73
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFD 382
+ + LVT YS +++ + + WN +IA++A++ L+ + + +
Sbjct: 74 VEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYK 133
Query: 383 QMIAVGVRPDGITFLSLLSVC 403
+M++ G+RPD T+ S+L C
Sbjct: 134 RMVSKGIRPDAFTYPSVLKAC 154
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 134/228 (58%), Gaps = 1/228 (0%)
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV 284
+V ++++ + K G++ A +F ++ R++ +W+ M+ GYAQ G EEAL LF + +
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 285 RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIV 344
+ +D F S+ + CA+ LL+ GRQ + L IK FDS V ++LV++YSKCG
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
+ F + ++ WN ++ A+AQH K F +M G++P+ ITFL++L+ C
Sbjct: 270 GAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329
Query: 405 RAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
AG +DE F+ M + I P +HYA LVD++ RAG+LQ A E+I
Sbjct: 330 HAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVI 376
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 153/357 (42%), Gaps = 62/357 (17%)
Query: 72 NSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA 131
N+++ Y S P SR F+ P K+ +W+++++ QN++ + + M N
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLR 113
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPC--------PNVVSYTVMIDGYVKVKEGGGIARA 183
+ ++ K + + + + C +V + ++D Y K G I A
Sbjct: 114 PDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKC---GEIVYA 170
Query: 184 RALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS-------------- 229
R +FD MP+RN V+W+ M+ G + G EEA LF +N+ +
Sbjct: 171 RKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANS 230
Query: 230 -------------------------TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMI 264
+++++ + K G + A+ +F ++ +++ WN M+
Sbjct: 231 TLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAML 290
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
YAQ+ ++ + LF +M +GM+P+ + F+++ AC+ L+D+GR + + + +
Sbjct: 291 KAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIE 350
Query: 325 SDLSVNNALVTMYSKCGSIVD------------SELAFGQTSQPDIVSWNTIIAAFA 369
+LV M + G + + +E +G V NT +AAFA
Sbjct: 351 PTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFA 407
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 77/137 (56%)
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+AQN +L +M+ ++PDD + S +CA L+ D GR + L +K G+D+D
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+ V ++LV MY+KCG IV + F + Q ++V+W+ ++ +AQ +A F + +
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 387 VGVRPDGITFLSLLSVC 403
+ + +F S++SVC
Sbjct: 211 ENLAVNDYSFSSVISVC 227
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 121/283 (42%), Gaps = 53/283 (18%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
DV+ + + +++ G I AR++FD+MP ++VVTW+ M+ Y G + + LF
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209
Query: 96 MKNVV----SWNAMVAGCVQNDMLDEAFNYFA----AMPERNAASYNAMISGFIKFGRLC 147
+N+ S++++++ C + +L+ + + ++ ++++S + K G
Sbjct: 210 FENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPE 269
Query: 148 DAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
A ++F E+P N+ GI W M+ +
Sbjct: 270 GAYQVFNEVPVKNL-----------------GI-----------------WNAMLKAYAQ 295
Query: 208 NGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI----AS 259
+ ++ ELF RM + N + ++ G VDE F Q++ I
Sbjct: 296 HSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKH 355
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ ++ + GR +EAL + + M + P + ++ +L T+C
Sbjct: 356 YASLVDMLGRAGRLQEALEVITNM---PIDPTESVWGALLTSC 395
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 132/245 (53%)
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYA 268
G + A +LF +P++++V+ ++I G + G V A LF ++ ++I SWNIMI+ Y
Sbjct: 167 GALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYL 226
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
+++LF +MVR G Q ++ V L AC A L +GR +A +I+ +S +
Sbjct: 227 GANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVV 286
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
++ AL+ MY KC + + F S + V+WN +I A H F+ MI
Sbjct: 287 IDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGM 346
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+RPD +TF+ +L C RAG + + + ++LMV ++ I P H C+ ++ S AG + A
Sbjct: 347 LRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEA 406
Query: 449 CEIIR 453
E ++
Sbjct: 407 EEALK 411
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 127/273 (46%), Gaps = 22/273 (8%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
++ G + A+++F ++P +D+V+WNS++ +G + LFD MP KN++SWN M+
Sbjct: 163 YTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMI 222
Query: 107 AGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQ----RLFKEMPC 158
+ + + + + F M + N ++ +++ + RL + + L +
Sbjct: 223 SAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLN 282
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELF 218
+VV T +ID Y K KE + AR +FD++ RN+V+W VMI +G E ELF
Sbjct: 283 SSVVIDTALIDMYGKCKE---VGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELF 339
Query: 219 ----GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQ------QIRCRDIASWNIMITGYA 268
M + + V ++ G + G V + + + QI+ W M Y+
Sbjct: 340 EAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQW-CMANLYS 398
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
G EEA + + P+ + +L ++
Sbjct: 399 SAGFPEEAEEALKNLPDEDVTPESTKWANLLSS 431
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK 320
N + Y + ++AL + ++R G PD FVSL + +D G+ + IK
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 321 HGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
HG D L V N+L+ MY+ CG++ ++ F + + DIVSWN+IIA ++ A
Sbjct: 147 HGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKL 206
Query: 381 FDQMIAVGVRPDG--ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
FD+M PD I++ ++S A S++LF MV G L++
Sbjct: 207 FDEM------PDKNIISWNIMISAYLGANNPGVSISLFREMVRA-GFQGNESTLVLLLNA 259
Query: 439 MSRAGQLQRA 448
R+ +L+
Sbjct: 260 CGRSARLKEG 269
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 140/257 (54%), Gaps = 7/257 (2%)
Query: 199 TVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
T ++N G A +F K++ A +++ + K G +D+A LF ++ R++
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMV-----RTGMQPDDLIFVSLFTACASLALLDQGRQ 313
SW+ +I GY G+ +EAL+LF +M ++P++ ++ +AC L L+QG+
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW 220
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT-SQPDIVSWNTIIAAFAQHV 372
+A + K+ + D+ + AL+ MY+KCGS+ ++ F S+ D+ +++ +I A +
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 373 LYYKARSYFDQMIAV-GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
L + F +M + P+ +TF+ +L C G I+E + F +M+ ++GI P +H
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH 340
Query: 432 YACLVDVMSRAGQLQRA 448
Y C+VD+ R+G ++ A
Sbjct: 341 YGCMVDLYGRSGLIKEA 357
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 150/313 (47%), Gaps = 39/313 (12%)
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
KD S+L Y G + ++ +FD K++ +WN++V + ++D+A F M
Sbjct: 95 KDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEM 154
Query: 126 PERNAASYNAMISGFIKFGRLCDAQRLFKEM--PCPNVVSYTVMIDGYVKVKEGGGIARA 183
PERN S++ +I+G++ G+ +A LF+EM P PN
Sbjct: 155 PERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPN----------------------- 191
Query: 184 RALFDAMPRRNEVSWTVMIN-----GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCK 238
+A R NE + + +++ G +E G + A+ + + ++V TA+I + K
Sbjct: 192 ----EAFVRPNEFTMSTVLSACGRLGALEQGKWVHAY-IDKYHVEIDIVLGTALIDMYAK 246
Query: 239 QGKVDEAWTLFQQIRC-RDIASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFV 296
G ++ A +F + +D+ +++ MI A G +E LFS+M + + P+ + FV
Sbjct: 247 CGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFV 306
Query: 297 SLFTACASLALLDQGRQTYALVIKH-GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS- 354
+ AC L+++G+ + ++I+ G + +V +Y + G I ++E
Sbjct: 307 GILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPM 366
Query: 355 QPDIVSWNTIIAA 367
+PD++ W ++++
Sbjct: 367 EPDVLIWGSLLSG 379
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 140/279 (50%), Gaps = 30/279 (10%)
Query: 47 FSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
+S G++ +A++VFD +KD+ WNS++ AY +G +R LFD MP +NV+SW+ ++
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 107 AGCVQNDMLDEAFNYFAAM--PERNAA-------SYNAMISGFIKFGRLCDAQRLF---- 153
G V EA + F M P+ N A + + ++S + G L + +
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYID 226
Query: 154 KEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV-SWTVMINGLVENGLYE 212
K ++V T +ID Y K G + RA+ +F+A+ + +V +++ MI L GL +
Sbjct: 227 KYHVEIDIVLGTALIDMYAKC---GSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD 283
Query: 213 EAWELFGRMPQKNVVASTAM----ITGFC-KQGKVDEAWTLFQQI-----RCRDIASWNI 262
E ++LF M + + ++ I G C +G ++E + F+ + I +
Sbjct: 284 ECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGC 343
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
M+ Y ++G +EA + + M M+PD LI+ SL +
Sbjct: 344 MVDLYGRSGLIKEAESFIASM---PMEPDVLIWGSLLSG 379
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 260 WNIMITGYAQN---GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
WNI+I N + ++++ +M + PD F L + + L G++T+A
Sbjct: 27 WNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHA 86
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
++ G D D V +L+ MYS CG + ++ F + D+ +WN+++ A+A+ L
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDD 146
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
AR FD+M V I++ L++ GK E+++LF M
Sbjct: 147 ARKLFDEMPERNV----ISWSCLINGYVMCGKYKEALDLFREM 185
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 214/460 (46%), Gaps = 60/460 (13%)
Query: 18 TARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMP-TKDVVTWNSMLT 76
T + L + + DV N+ I+ + +AG I A V D+M + DVVT+N++L
Sbjct: 153 TRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILR 212
Query: 77 AYWHSGFPQHSRALFDAMPMKN----VVSWNAMVAGCVQNDMLDEAFNYFAAMPER---- 128
+ SG + + + D M ++ V+++ ++ ++ + A M +R
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 129 NAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARAR 184
+ +YN +++G K GRL +A + +MP PNV+++ +++ G A
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCST---GRWMDAE 329
Query: 185 ALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGF 236
L M R+ + V++ ++IN L GL A ++ +MPQ N ++ ++ GF
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Query: 237 CKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
CK+ K+D A +++ R DI ++N M+T ++G+ E+A+ + +Q+ G P
Sbjct: 390 CKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSP-- 447
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
+ ++ T LA G+ A+ + L M +K
Sbjct: 448 -VLITYNTVIDGLA--KAGKTGKAIKL-------------LDEMRAK------------- 478
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
+PD +++++++ ++ +A +F + +G+RP+ +TF S++ C++ + D +
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
++ M+ + G P Y L++ ++ G + A E++
Sbjct: 539 IDFLVFMI-NRGCKPNETSYTILIEGLAYEGMAKEALELL 577
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 204/422 (48%), Gaps = 28/422 (6%)
Query: 53 ITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQN 112
++AA +V + ++ + Y +S H ++ + +++V S N + V+
Sbjct: 57 VSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQ-MVRT 115
Query: 113 DMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSY 164
L+E F + M + +I GF + G+ A ++ + + P+V++Y
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 165 TVMIDGYVKVKEGGGIARARALFDAMPRRNEV-SWTVMINGLVENGLYEEAWELFGRMPQ 223
VMI GY K G I A ++ D M +V ++ ++ L ++G ++A E+ RM Q
Sbjct: 176 NVMISGYCKA---GEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 224 KN----VVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEE 275
++ V+ T +I C+ V A L ++R R D+ ++N+++ G + GR +E
Sbjct: 233 RDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 276 ALNLFSQMVRTGMQPDDLIF-VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALV 334
A+ + M +G QP+ + + L + C++ +D + A +++ GF + N L+
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD-AEKLLADMLRKGFSPSVVTFNILI 351
Query: 335 TMYSKCG----SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVR 390
+ G +I E QP+ +S+N ++ F + +A Y ++M++ G
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCY 411
Query: 391 PDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACE 450
PD +T+ ++L+ C+ GK+++++ + N + G P Y ++D +++AG+ +A +
Sbjct: 412 PDIVTYNTMLTALCKDGKVEDAVEILN-QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470
Query: 451 II 452
++
Sbjct: 471 LL 472
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 198/453 (43%), Gaps = 58/453 (12%)
Query: 24 FLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMP----TKDVVTWNSMLTAYW 79
FL H + D+ I F R G A ++ + + DV+T+N M++ Y
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 80 HSGFPQHSRALFDAMPMK-NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMIS 138
+G ++ ++ D M + +VV++N ++ + L +A M +R+
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY------- 236
Query: 139 GFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----N 194
P+V++YT++I+ + G+ A L D M R +
Sbjct: 237 --------------------PDVITYTILIEATCR---DSGVGHAMKLLDEMRDRGCTPD 273
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQ 250
V++ V++NG+ + G +EA + MP Q NV+ ++ C G+ +A L
Sbjct: 274 VVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLA 333
Query: 251 QIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
+ + + ++NI+I + G A+++ +M + G QP+ L + L
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWN 362
+D+ + ++ G D+ N ++T K G + D+ Q S P ++++N
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYN 453
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
T+I A+ KA D+M A ++PD IT+ SL+ R GK+DE++ F H+
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFF----HE 509
Query: 423 Y---GIPPRSEHYACLVDVMSRAGQLQRACEII 452
+ GI P + + ++ + ++ Q RA + +
Sbjct: 510 FERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 103/233 (44%), Gaps = 23/233 (9%)
Query: 19 ARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSM 74
R L +H + N + F + + A + ++M ++ D+VT+N+M
Sbjct: 361 GRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTM 420
Query: 75 LTAYWHSGFPQHSRALFDAMPMKN----VVSWNAMVAGCVQNDMLDEAFNYFAAMPERN- 129
LTA G + + + + + K ++++N ++ G + +A M ++
Sbjct: 421 LTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDL 480
Query: 130 ---AASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIAR 182
+Y++++ G + G++ +A + F E PN V++ ++ G K ++ R
Sbjct: 481 KPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQ---TDR 537
Query: 183 ARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTA 231
A M R NE S+T++I GL G+ +EA EL + K ++ ++
Sbjct: 538 AIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 120/212 (56%), Gaps = 2/212 (0%)
Query: 244 EAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
+A +F +I D+ W++++ GY + G G E L +F +M+ G++PD+ + TACA
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 304 SLALLDQGRQTYALVIKHGF-DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWN 362
+ L QG+ + V K + +SD+ V ALV MY+KCG I + F + ++ ++ SW
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAV-GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
+I +A + KA + +++ G++PD + L +L+ C G ++E ++ M
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
Y I P+ EHY+C+VD+M RAG+L A +I
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIE 381
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 96/180 (53%), Gaps = 7/180 (3%)
Query: 140 FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG-GIARARALFDAMPRRNEVSW 198
+++ L DA+++F E+P P+VV + V+++GYV+ G G+ R + +E S
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSV 221
Query: 199 TVMINGLVENG-LYEEAW--ELFGRMP--QKNVVASTAMITGFCKQGKVDEAWTLFQQIR 253
T + + G L + W E + + +V TA++ + K G ++ A +F+++
Sbjct: 222 TTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLT 281
Query: 254 CRDIASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQPDDLIFVSLFTACASLALLDQGR 312
R++ SW +I GYA G ++A+ ++ R G++PD ++ + + ACA L++GR
Sbjct: 282 RRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGR 341
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 107/239 (44%), Gaps = 8/239 (3%)
Query: 223 QKNVVASTAMITGFCKQGKVDE----AWTLFQQIRCRDIASWNIMITGYAQNGRGEEALN 278
+N A + ++T F +++ A ++F I + ++ MI +++ + L
Sbjct: 40 HRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLR 99
Query: 279 LFSQMVRT---GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG-FDSDLSVNNALV 334
F MV+ + P L F L AC G+Q + V+K+G F SD V ++
Sbjct: 100 YFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVL 159
Query: 335 TMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
+Y + ++D+ F + QPD+V W+ ++ + + L + F +M+ G+ PD
Sbjct: 160 RIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEF 219
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ + L+ C + G + + + + I LVD+ ++ G ++ A E+ +
Sbjct: 220 SVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFK 278
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/338 (19%), Positives = 137/338 (40%), Gaps = 43/338 (12%)
Query: 56 ARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQ 111
AR+VFD++P DVV W+ ++ Y G +F M +K + S + C Q
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 112 NDMLDEA-----FNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
L + F + E + A++ + K G + A +FK++ NV S+
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAA 290
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSW-TVMINGLV----ENGLYEEAWELFGRM 221
+I GY G +A + + R + + +V++ G++ G EE + M
Sbjct: 291 LIGGYAAY---GYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENM 347
Query: 222 PQKNVVAS-----TAMITGFCKQGKVDEAWTLFQQIRCRDIAS-WNIMITG---YAQNGR 272
+ + + ++ C+ G++D+A L +++ + +AS W ++ G +
Sbjct: 348 EARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVEL 407
Query: 273 GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD-----SDL 327
GE A+ + + ++ ++ V L S+ + + ++ + G S L
Sbjct: 408 GELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVL 467
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTII 365
V+ + S G S P+++ +T+I
Sbjct: 468 EVDGNVTKFVS------------GDVSHPNLLQIHTVI 493
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 147/329 (44%), Gaps = 43/329 (13%)
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFG 219
NVV + ++ Y K+ + ++F MP RN SW ++I +G ++ +LF
Sbjct: 65 NVVLSSKLVLAYSKLNHL--FPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFL 122
Query: 220 RMPQKNVV----------------------------------------ASTAMITGFCKQ 239
RM +++ V S+A++ +
Sbjct: 123 RMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 240 GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
GK+ A LF + RD + M GY Q G L +F +M +G D ++ VSL
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
AC L L G+ + I+ L++ NA+ MY KC + + F S+ D++
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 302
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
SW+++I + + FD+M+ G+ P+ +TFL +LS C G +++S F LM
Sbjct: 303 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM 362
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+Y I P +HYA + D MSRAG L+ A
Sbjct: 363 -QEYNIVPELKHYASVADCMSRAGLLEEA 390
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 147/330 (44%), Gaps = 37/330 (11%)
Query: 44 IAAFSRAGNI-TAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSW 102
+ A+S+ ++ + VF MP +++ +WN ++ + SGF S LF M W
Sbjct: 73 VLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM-------W 125
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAAS-------------------YNAMISGFIKF 143
CV+ D A R A S +A++ ++
Sbjct: 126 RE---SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 144 GRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGG-GIARARAL-FDAMPRRNEVSWTVM 201
G+L A++LF +MP + V YT M GYV+ E G+A R + + + V +++
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 202 IN----GLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI 257
+ G +++G W R + A+ + K +D A T+F + RD+
Sbjct: 243 MACGQLGALKHGKSVHGW-CIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDV 301
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
SW+ +I GY +G + LF +M++ G++P+ + F+ + +ACA L+++ + L
Sbjct: 302 ISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRL 361
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSE 347
+ ++ +L ++ S+ G + ++E
Sbjct: 362 MQEYNIVPELKHYASVADCMSRAGLLEEAE 391
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 210/435 (48%), Gaps = 36/435 (8%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
I F + G + A +F M + D++ +++++ Y+ +G LF K
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDA-- 149
+VV +++ + V++ L A + M N +Y +I G + GR+ +A
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 150 --QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMIN 203
++ K P++V+Y+ +IDG+ K G + AL++ M + + V + V+++
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKC---GNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 204 GLVENGLYEEAW----ELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR---- 255
GL + GL A ++ G+ + NVV ++I G+C+ + DEA +F+ +
Sbjct: 470 GLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKP 529
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
D+A++ ++ GR EEAL LF +M + G++PD L + +L A G Q +
Sbjct: 530 DVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF 589
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ----TSQPDIVSWNTIIAAFAQH 371
L+ ++ +D++V N ++ + KC I D+ F +PDIV++NT+I +
Sbjct: 590 DLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 649
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
+A F+ + P+ +T L+ V C+ +D ++ +F++M + G P +
Sbjct: 650 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVT 708
Query: 432 YACLVDVMSRAGQLQ 446
Y CL+D S++ ++
Sbjct: 709 YGCLMDWFSKSVDIE 723
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 153/301 (50%), Gaps = 20/301 (6%)
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYE 212
P PNVV++ +I+G+ K G + RA LF M +R + ++++ +I+G + G+
Sbjct: 282 PAPNVVTFCTLINGFCK---RGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLG 338
Query: 213 EAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMI 264
+LF + K +VV ++ I + K G + A +++++ C+ I+ ++ I+I
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILI 398
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
G Q+GR EA ++ Q+++ GM+P + + SL L G Y +IK G+
Sbjct: 399 KGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYP 458
Query: 325 SDLSVNNALVTMYSKCGSIVD----SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
D+ + LV SK G ++ S GQ+ + ++V +N++I + + + +A
Sbjct: 459 PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
F M G++PD TF +++ V G+++E++ LF M G+ P + Y L+D
Sbjct: 519 FRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK-MGLEPDALAYCTLIDAFC 577
Query: 441 R 441
+
Sbjct: 578 K 578
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 205/470 (43%), Gaps = 67/470 (14%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
I + +AG + ++F + K DVV ++S + Y SG + ++ M +
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQR 151
NVV++ ++ G Q+ + EAF + + +R + +Y+++I GF K G L
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 152 LFKEM-----PCPNVVSYTVMIDGYVK-----------VKEGGGIARAR-----ALFDAM 190
L+++M P P+VV Y V++DG K VK G R +L D
Sbjct: 448 LYEDMIKMGYP-PDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 191 PRRNE--------------------VSWTVMINGLVENGLYEEAWELFGRM----PQKNV 226
R N ++T ++ + G EEA LF RM + +
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDA 566
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIR----CRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+A +I FCK K LF ++ DIA N++I + R E+A F+
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC-- 340
++ M+PD + + ++ SL LD+ + + L+ F + L+ + K
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 341 --GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
G+I + + S+P+ V++ ++ F++ V + F++M G+ P +++
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 399 LLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
++ C+ G++DE+ N+F+ + D + P YA L+ + G+L A
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYAILIRGYCKVGRLVEA 795
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 131/250 (52%), Gaps = 23/250 (9%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDM-----LDEAFNY 121
D + + +++ A+ P LFD M +N +S + V V + + +++A +
Sbjct: 565 DALAYCTLIDAFCKHMKPTIGLQLFDLM-QRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 122 FAAMPE----RNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVK 173
F + E + +YN MI G+ RL +A+R+F+ + PN V+ T++I K
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 174 VKEGGGIARARALF-DAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVA 228
+ G R ++ + + N V++ +++ ++ E +++LF M +K ++V+
Sbjct: 684 NNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVS 743
Query: 229 STAMITGFCKQGKVDEAWTLFQQ-IRCR---DIASWNIMITGYAQNGRGEEALNLFSQMV 284
+ +I G CK+G+VDEA +F Q I + D+ ++ I+I GY + GR EA L+ M+
Sbjct: 744 YSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHML 803
Query: 285 RTGMQPDDLI 294
R G++PDDL+
Sbjct: 804 RNGVKPDDLL 813
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 175/386 (45%), Gaps = 41/386 (10%)
Query: 44 IAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
I F + GN+ + +++ M DVV + ++ G H+ M +
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQ- 150
NVV +N+++ G + + DEA F M + + A++ ++ I GRL +A
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 151 ---RLFKEMPCPNVVSYTVMIDGYVK-VKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
R+FK P+ ++Y +ID + K +K G+ LFD M +RN++S + + +V
Sbjct: 553 LFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQ----LFDLM-QRNKISADIAVCNVV 607
Query: 207 ENGLY-----EEAWELF-----GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR- 255
+ L+ E+A + F G+M + ++V MI G+C ++DEA +F+ ++
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKM-EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 256 ---DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
+ + I+I +N + A+ +FS M G +P+ + + L + ++
Sbjct: 667 FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSF 726
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAF 368
+ + + + G + + ++ K G + ++ F Q PD+V++ +I +
Sbjct: 727 KLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGY 786
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGI 394
+ +A ++ M+ GV+PD +
Sbjct: 787 CKVGRLVEAALLYEHMLRNGVKPDDL 812
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
Query: 129 NAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARAR 184
+ A N +I K R+ DA + F + P++V+Y MI GY ++ R
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 659
Query: 185 ALFDAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQ 239
L P N V+ T++I+ L +N + A +F M +K N V ++ F K
Sbjct: 660 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 240 GKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
++ ++ LF++++ + I+ S++I+I G + GR +EA N+F Q + + PD + +
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 779
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
L + L + Y ++++G D + AL
Sbjct: 780 AILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 817
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 114/260 (43%), Gaps = 17/260 (6%)
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF------CKQGKVDEAWTLFQQIRC 254
M+N L+ + + + F ++ + + S GF CK G+V +A + +
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVME 245
Query: 255 RD----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
R I S N ++ G + + + E A L S ++ G P+ + F +L +D+
Sbjct: 246 RGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP----DIVSWNTIIA 366
+ ++ + G + DL + L+ Y K G + F Q D+V +++ I
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
+ + A + +M+ G+ P+ +T+ L+ C+ G+I E+ ++ ++ G+
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-RGME 423
Query: 427 PRSEHYACLVDVMSRAGQLQ 446
P Y+ L+D + G L+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLR 443
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/510 (23%), Positives = 215/510 (42%), Gaps = 96/510 (18%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRA 89
S +V+ N+ I F AGNI A +FDKM TK +VVT+N+++ Y
Sbjct: 202 SPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFK 261
Query: 90 LFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFI 141
L +M +K N++S+N ++ G + + E M R + +YN +I G+
Sbjct: 262 LLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 142 KFGRLCDAQRLFKEM----PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR---- 193
K G A + EM P+V++YT +I K G + RA D M R
Sbjct: 322 KEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK---AGNMNRAMEFLDQMRVRGLCP 378
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLF 249
NE ++T +++G + G EA+ + M +VV A+I G C GK+++A +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 250 QQIR------------------CR---------------------DIASWNIMITGYAQN 270
+ ++ CR D +++ +I G+ +
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
R +EA +L+ +M+R G+ PD+ + +L A L++ Q + +++ G D+
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 331 NALVTMYSKCGSIVDSEL----AFGQTSQPDIVSWNT---------------IIAAFAQH 371
+ L+ +K +++ F + S P V+++T +I F
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
+ +A F+ M+ +PDG + ++ CRAG I ++ L+ MV G +
Sbjct: 619 GMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS-GFLLHTVT 677
Query: 432 YACLVDVMSRAGQLQ----------RACEI 451
LV + + G++ R+CE+
Sbjct: 678 VIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/444 (22%), Positives = 205/444 (46%), Gaps = 66/444 (14%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
Y A L+ A NI+ A VF +M + +V T+N ++ + +G + LFD
Sbjct: 172 YNAVLD-ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDK 230
Query: 94 MPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGR 145
M K NVV++N ++ G + +D+ F +M E N SYN +I+G + GR
Sbjct: 231 METKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGR 290
Query: 146 LCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVS 197
+ + + EM + V+Y +I GY K G +A + M R + ++
Sbjct: 291 MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK---EGNFHQALVMHAEMLRHGLTPSVIT 347
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQIR 253
+T +I+ + + G A E +M + + + T ++ GF ++G ++EA+ + +++
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 254 ----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CASLALL 308
+ ++N +I G+ G+ E+A+ + M G+ PD + + ++ + C S
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS---- 463
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
+ D L V +V + +PD ++++++I F
Sbjct: 464 ------------YDVDEALRVKREMVE----------------KGIKPDTITYSSLIQGF 495
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
+ +A +++M+ VG+ PD T+ +L++ C G +++++ L N MV + G+ P
Sbjct: 496 CEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV-EKGVLPD 554
Query: 429 SEHYACLVDVMSRAGQLQRACEII 452
Y+ L++ +++ + + A ++
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLL 578
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 175/339 (51%), Gaps = 25/339 (7%)
Query: 133 YNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMIDGYVKVKEGGGIARAR---- 184
YN +++ +FG + + ++++ EM CPN+ +Y M++GY K+ G + A
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKL---GNVEEANQYVS 242
Query: 185 ALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQG 240
+ +A + ++T +I G + + A+++F MP ++N VA T +I G C
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 241 KVDEAWTLFQQIRCRD----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
++DEA LF +++ + + ++ ++I + R EALNL +M TG++P+ +
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 297 SLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQ 352
L + S ++ R+ +++ G ++ NAL+ Y K G I D+ EL +
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
P+ ++N +I + + + +KA ++M+ V PD +T+ SL+ CR+G D +
Sbjct: 423 KLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
L +LM +D G+ P Y ++D + ++ +++ AC++
Sbjct: 482 YRLLSLM-NDRGLVPDQWTYTSMIDSLCKSKRVEEACDL 519
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 191/445 (42%), Gaps = 37/445 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRALF 91
++Y N + + + GN+ A Q K+ D T+ S++ Y + +F
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 92 DAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNA----ASYNAMISGFIKF 143
+ MP+K N V++ ++ G +DEA + F M + +Y +I
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 144 GRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NE 195
R +A L KEM PN+ +YTV+ID +AR L M + N
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLC---SQCKFEKARELLGQMLEKGLMPNV 393
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAWTLFQQ 251
+++ +ING + G+ E+A ++ M + + +T +I G+CK V +A + +
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNK 452
Query: 252 IRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+ R D+ ++N +I G ++G + A L S M G+ PD + S+ +
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL----AFGQTSQPDIVSWNT 363
+++ + + + G + ++ + AL+ Y K G + ++ L + P+ +++N
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDY 423
+I +A ++M+ +G++P T L+ + G D + + F M+
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS- 631
Query: 424 GIPPRSEHYACLVDVMSRAGQLQRA 448
G P + Y + R G+L A
Sbjct: 632 GTKPDAHTYTTFIQTYCREGRLLDA 656
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 198/482 (41%), Gaps = 82/482 (17%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALF 91
+V N I + + G I A V + M ++ + T+N ++ Y S + L
Sbjct: 392 NVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLN 451
Query: 92 DAMPMK---NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFG 144
+ K +VV++N+++ G ++ D A+ + M +R +Y +MI K
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 145 RLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EV 196
R+ +A LF + PNVV YT +IDGY K G + A + + M +N +
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCK---AGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 197 SWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQI 252
++ +I+GL +G +EA L +M Q V T +I K G D A++ FQQ+
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 253 ------------------RCR---------------------DIASWNIMITGYAQNGRG 273
CR D+ +++ +I GY G+
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
A ++ +M TG +P F+SL L + G+Q G + +L + +
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLI---KHLLEMKYGKQ-------KGSEPELCAMSNM 738
Query: 334 VTMYSKCGSIVD-SELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA-VGVRP 391
+ ++V+ E + P+ S+ +I + A FD M G+ P
Sbjct: 739 MEF----DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISP 794
Query: 392 DGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ F +LLS CC+ K +E+ + + M+ G P+ E L+ + + G+ +R +
Sbjct: 795 SELVFNALLSCCCKLKKHNEAAKVVDDMIC-VGHLPQLESCKVLICGLYKKGEKERGTSV 853
Query: 452 IR 453
+
Sbjct: 854 FQ 855
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 167/353 (47%), Gaps = 42/353 (11%)
Query: 109 CVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSY 164
C + D+ + F+ + AM G+ + G DA ++ +M C P S
Sbjct: 180 CRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSI 239
Query: 165 TVMIDGYVKVKEGGGIARARALFDAMPRRNE----VSWTVMINGLVENGLYEEAWELFGR 220
+V + V +K+ + R + + +R E V + V++ +E+GL+++A ++F
Sbjct: 240 SVALKACVDLKD---LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDG 296
Query: 221 MPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLF 280
M + R++ +WN +I+ ++ R E NLF
Sbjct: 297 MSE-------------------------------RNVVTWNSLISVLSKKVRVHEMFNLF 325
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
+M + ++ AC+ +A L G++ +A ++K D+ + N+L+ MY KC
Sbjct: 326 RKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKC 385
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G + S F D+ SWN ++ +A + + + F+ MI GV PDGITF++LL
Sbjct: 386 GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALL 445
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
S C G + ++LF M ++ + P EHYACLVD++ RAG+++ A ++I
Sbjct: 446 SGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIE 498
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 117/262 (44%), Gaps = 23/262 (8%)
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDE 117
Q+ + D V +N +L Y SG +R +FD M +NVV+WN++++ + + E
Sbjct: 261 QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHE 320
Query: 118 AFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQ----RLFKEMPCPNVVSYTVMID 169
FN F M E + A+ ++ + L + ++ K P+V ++D
Sbjct: 321 MFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMD 380
Query: 170 GYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV--- 226
Y K G + +R +FD M ++ SW +M+N NG EE LF M + V
Sbjct: 381 MYGKC---GEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPD 437
Query: 227 -VASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLF 280
+ A+++G G + +LF++++ + + ++ + G+ +EA+ +
Sbjct: 438 GITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVI 497
Query: 281 SQMVRTGMQPDDLIFVSLFTAC 302
M +P I+ SL +C
Sbjct: 498 ETM---PFKPSASIWGSLLNSC 516
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIAS---WNIMITGYAQNGRGEEALNLFSQMVRT 286
+ +IT F ++D A +F + + + W M GY++NG +AL ++ M+ +
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
++P + AC L L GR +A ++K D V N L+ +Y + G D+
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F S+ ++V+WN++I+ ++ V ++ + F +M + T ++L C R
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 407 GKI 409
+
Sbjct: 351 AAL 353
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 11/149 (7%)
Query: 18 TARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTA 77
T + H ++ +K DV N + + + G + +R+VFD M TKD+ +WN ML
Sbjct: 355 TGKEIHAQILKSKE--KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNC 412
Query: 78 YWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS- 132
Y +G + LF+ M V +++ A+++GC + + + F M S
Sbjct: 413 YAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Query: 133 ----YNAMISGFIKFGRLCDAQRLFKEMP 157
Y ++ + G++ +A ++ + MP
Sbjct: 473 ALEHYACLVDILGRAGKIKEAVKVIETMP 501
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 159/316 (50%), Gaps = 16/316 (5%)
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVK---EGGGIARARALFDAMPRRNEVSWTVMINGLVE 207
R+F + P + MI + + EG + R+ ++P N +S + + ++
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPA-NPLSSSFALKCCIK 125
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGF------CKQGKVDEAWTLFQQIRCRDIASWN 261
+G ++ G++ ++ + ++T C+ +A +F +I RD SWN
Sbjct: 126 SGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENST--DACKVFDEIPKRDTVSWN 183
Query: 262 IMITGYAQNGRGEEALNLFSQM---VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
++ + Y +N R + L LF +M V ++PD + + ACA+L LD G+Q + +
Sbjct: 184 VLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI 243
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
++G L+++N LV+MYS+CGS+ + F + ++VSW +I+ A + +A
Sbjct: 244 DENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAI 303
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH-DYGIPPRSEHYACLVD 437
F++M+ G+ P+ T LLS C +G + E M F+ M ++ I P HY C+VD
Sbjct: 304 EAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVD 363
Query: 438 VMSRAGQLQRACEIIR 453
++ RA L +A +I+
Sbjct: 364 LLGRARLLDKAYSLIK 379
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/441 (21%), Positives = 191/441 (43%), Gaps = 34/441 (7%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSR-AGNITAARQVFDKMP 64
++S+ + T R H LL+ + DV+ L+ A S +I + +VF +
Sbjct: 14 LLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRL 73
Query: 65 TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAG-----CVQNDMLDEAF 119
+ N+M+ A+ S P LF ++ + + N + + C+++ L
Sbjct: 74 NPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGL 133
Query: 120 NYFAAMPERNAASYNAMISGFIKFGRLC----DAQRLFKEMPCPNVVSYTVMIDGYVKVK 175
+ S + +++ + C DA ++F E+P + VS+ V+ Y++ K
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNK 193
Query: 176 EGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWEL----FGRMPQ----KNVV 227
+ LFD M +N+V V +G+ + L FG+ +N +
Sbjct: 194 RTRDVL---VLFDKM--KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGL 248
Query: 228 A-----STAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQ 282
+ S +++ + + G +D+A+ +F +R R++ SW +I+G A NG G+EA+ F++
Sbjct: 249 SGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNE 308
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF--DSDLSVNNALVTMYSKC 340
M++ G+ P++ L +AC+ L+ +G + + F +L +V + +
Sbjct: 309 MLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGR- 367
Query: 341 GSIVDSELAFGQTSQ--PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
++D + ++ + PD W T++ A H +I + G ++
Sbjct: 368 ARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAG-DYVL 426
Query: 399 LLSVCCRAGKIDESMNLFNLM 419
LL+ GK ++ L +LM
Sbjct: 427 LLNTYSTVGKWEKVTELRSLM 447
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 165/347 (47%), Gaps = 16/347 (4%)
Query: 120 NYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK-EGG 178
N A + YN +I ++ G + LF M +V + +K
Sbjct: 41 NALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSF 100
Query: 179 GIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMIT 234
++ AL +R + T + E G E + ++F + VVA +++
Sbjct: 101 SVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLD 160
Query: 235 GFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMV---RTGMQPD 291
+ G++D A+ FQ++ D+ SW +I G+++ G +AL +F +M+ R + P+
Sbjct: 161 ACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPN 220
Query: 292 DLIFVSLFTACASLALLDQG-----RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
+ FVS+ ++CA+ DQG +Q + V+ ++ AL+ MY K G + +
Sbjct: 221 EATFVSVLSSCANF---DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMA 277
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
F Q + +WN II+A A + +A F+ M + V P+GIT L++L+ C R+
Sbjct: 278 LTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARS 337
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+D + LF+ + +Y I P SEHY C+VD++ RAG L A I+
Sbjct: 338 KLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQ 384
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 111/285 (38%), Gaps = 51/285 (17%)
Query: 16 SSTARHTHFLLVFAKHFSSYDVYRANLNIAA---FSRAGNITAARQVFDKMPTKDVVTWN 72
+S A TH L A H ++ +L AA FS + + Q + D
Sbjct: 69 TSLALFTHML---ASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQT 125
Query: 73 SMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS 132
S + Y G + SR +FD + VV+ N+++ C +N +D AF YF MP + S
Sbjct: 126 SFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVS 185
Query: 133 YNAMISGFIKFGRLCDAQRLFKEM-------PCPNVVSYTVM-----------------I 168
+ +I+GF K G A +F EM PN ++ + I
Sbjct: 186 WTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQI 245
Query: 169 DGYVKVKE-----------------GGGIARARALFDAMPRRNEVSWTVMINGLVENGLY 211
GYV KE G + A +FD + + +W +I+ L NG
Sbjct: 246 HGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRP 305
Query: 212 EEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQI 252
++A E+F M N + A++T + VD LF I
Sbjct: 306 KQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSI 350
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 184/408 (45%), Gaps = 33/408 (8%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMP- 95
N I G + A + +KM K DVVT+ +++ G + + L M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 96 ---MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCD 148
+VV ++A++ ++ +A F+ M E+ N +YN MI GF FGR D
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 149 AQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTV 200
AQRL ++M P+V+++ +I VK G + A L D M R + V++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVK---EGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----D 256
MI G ++ +++A +F M +VV +I +C+ +VDE L ++I R +
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
++N +I G+ + A +LF +M+ G+ PD + L L++ + +
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG-----QTSQPDIVSWNTIIAAFAQH 371
++ D D N ++ K GS VD +PD+ ++N +I+ F
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCK-GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
A F +M G PD T+ +L+ C +AG+ID+S+ L + M
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 192/425 (45%), Gaps = 32/425 (7%)
Query: 56 ARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVA 107
A +FD+M T V+T+N+++ G + AL + M K +VV++ +V
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 108 GCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEM----PCP 159
G + A N + M E + Y+A+I K G DAQ LF EM P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAW 215
NV +Y MIDG+ G + A+ L M R + +++ +I+ V+ G EA
Sbjct: 330 NVFTYNCMIDGFCSF---GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 216 ELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
+L M + + V +MI GFCK + D+A +F + D+ ++N +I Y +
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
R +E + L ++ R G+ + + +L + L+ + + +I HG D N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 332 ALVTMYSKCGSIVDSELAFG--QTSQPDI--VSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
L+ + + + ++ F Q S+ D+ V++N II + +A F +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
GV PD T+ ++S C I ++ LF+ M D G P + Y L+ +AG++ +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 448 ACEII 452
+ E+I
Sbjct: 626 SIELI 630
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 149/315 (47%), Gaps = 27/315 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALF 91
+V+ N I F G + A+++ M + DV+T+N++++A G + L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 92 DAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC 147
D M + + V++N+M+ G +++ D+A + F M + ++N +I + + R+
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 148 DAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWT 199
+ +L +E+ N +Y +I G+ +V + A+ LF M + ++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVD---NLNAAQDLFQEMISHGVCPDTITCN 506
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR 255
+++ G EN EEA ELF + + VA +I G CK KVDEAW LF +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 256 ----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
D+ ++N+MI+G+ +A LF +M G +PD+ + +L C +D+
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 312 RQTYALVIKHGFDSD 326
+ + + +GF D
Sbjct: 627 IELISEMRSNGFSGD 641
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 170/378 (44%), Gaps = 47/378 (12%)
Query: 115 LDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP----NVVSYTV 166
LD+A ++F M P A N +I F++ R A L+++M N+ S+ +
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMP 222
+I + + ++ + + F + + + V++ +++GL EA LFG M
Sbjct: 147 LIKCFCDCHK---LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 223 QKN-------------------VVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIAS 259
+ V+ +I G C +G+V EA L ++ + D+ +
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
+ ++ G + G + ALNL S+M T ++PD +I+ ++ + ++ ++
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYY 375
+ G ++ N ++ + G D++ + PD++++N +I+A + +
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
+A D+M+ + PD +T+ S++ C+ + D++ ++F+LM P + +
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTI 438
Query: 436 VDVMSRAGQLQRACEIIR 453
+DV RA ++ +++R
Sbjct: 439 IDVYCRAKRVDEGMQLLR 456
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 184/408 (45%), Gaps = 33/408 (8%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMP- 95
N I G + A + +KM K DVVT+ +++ G + + L M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 96 ---MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCD 148
+VV ++A++ ++ +A F+ M E+ N +YN MI GF FGR D
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 149 AQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTV 200
AQRL ++M P+V+++ +I VK G + A L D M R + V++
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVK---EGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----D 256
MI G ++ +++A +F M +VV +I +C+ +VDE L ++I R +
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
++N +I G+ + A +LF +M+ G+ PD + L L++ + +
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG-----QTSQPDIVSWNTIIAAFAQH 371
++ D D N ++ K GS VD +PD+ ++N +I+ F
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCK-GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGK 585
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
A F +M G PD T+ +L+ C +AG+ID+S+ L + M
Sbjct: 586 SAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 192/425 (45%), Gaps = 32/425 (7%)
Query: 56 ARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVA 107
A +FD+M T V+T+N+++ G + AL + M K +VV++ +V
Sbjct: 210 AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 269
Query: 108 GCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEM----PCP 159
G + A N + M E + Y+A+I K G DAQ LF EM P
Sbjct: 270 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 329
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAW 215
NV +Y MIDG+ G + A+ L M R + +++ +I+ V+ G EA
Sbjct: 330 NVFTYNCMIDGFCSF---GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 216 ELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNG 271
+L M + + V +MI GFCK + D+A +F + D+ ++N +I Y +
Sbjct: 387 KLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAK 446
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
R +E + L ++ R G+ + + +L + L+ + + +I HG D N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506
Query: 332 ALVTMYSKCGSIVDSELAFG--QTSQPDI--VSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
L+ + + + ++ F Q S+ D+ V++N II + +A F +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
GV PD T+ ++S C I ++ LF+ M D G P + Y L+ +AG++ +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDK 625
Query: 448 ACEII 452
+ E+I
Sbjct: 626 SIELI 630
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 149/315 (47%), Gaps = 27/315 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALF 91
+V+ N I F G + A+++ M + DV+T+N++++A G + L
Sbjct: 330 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 389
Query: 92 DAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLC 147
D M + + V++N+M+ G +++ D+A + F M + ++N +I + + R+
Sbjct: 390 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVD 449
Query: 148 DAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWT 199
+ +L +E+ N +Y +I G+ +V + A+ LF M + ++
Sbjct: 450 EGMQLLREISRRGLVANTTTYNTLIHGFCEVD---NLNAAQDLFQEMISHGVCPDTITCN 506
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR 255
+++ G EN EEA ELF + + VA +I G CK KVDEAW LF +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566
Query: 256 ----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
D+ ++N+MI+G+ +A LF +M G +PD+ + +L C +D+
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626
Query: 312 RQTYALVIKHGFDSD 326
+ + + +GF D
Sbjct: 627 IELISEMRSNGFSGD 641
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/378 (20%), Positives = 170/378 (44%), Gaps = 47/378 (12%)
Query: 115 LDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCP----NVVSYTV 166
LD+A ++F M P A N +I F++ R A L+++M N+ S+ +
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMP 222
+I + + ++ + + F + + + V++ +++GL EA LFG M
Sbjct: 147 LIKCFCDCHK---LSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMV 203
Query: 223 QKN-------------------VVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIAS 259
+ V+ +I G C +G+V EA L ++ + D+ +
Sbjct: 204 ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVT 263
Query: 260 WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
+ ++ G + G + ALNL S+M T ++PD +I+ ++ + ++ ++
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYY 375
+ G ++ N ++ + G D++ + PD++++N +I+A + +
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
+A D+M+ + PD +T+ S++ C+ + D++ ++F+LM P + +
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTI 438
Query: 436 VDVMSRAGQLQRACEIIR 453
+DV RA ++ +++R
Sbjct: 439 IDVYCRAKRVDEGMQLLR 456
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 187/421 (44%), Gaps = 45/421 (10%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALF 91
D + N I R + A + D+M K D+VT+ ++ G + +L
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 92 DAMPMKN----VVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKF 143
M VV +N ++ +++A N F M + N +YN++I +
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304
Query: 144 GRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NE 195
GR DA RL +M PNVV+++ +ID +VK G + A L+D M +R +
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDI 361
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQ 251
+++ +ING + +EA +F M K NVV +I GFCK +VDE LF++
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 252 IRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+ R + ++ +I G+ Q + A +F QMV G+ PD + + L L
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG-----L 476
Query: 308 LDQGRQTYALVI-----KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDI 358
+ G+ ALV+ + + D+ N ++ K G + D F S +P++
Sbjct: 477 CNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 359 VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNL 418
V++ T+++ F + L +A + F +M G PD T+ +L+ R G S L
Sbjct: 537 VTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIRE 596
Query: 419 M 419
M
Sbjct: 597 M 597
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 198/452 (43%), Gaps = 36/452 (7%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRA 89
S+++Y ++ I F R ++ A V KM D+VT NS+L + H + +
Sbjct: 113 SHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVS 172
Query: 90 LFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFI 141
L M + ++N ++ G +++ EA M + + +Y +++G
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 142 KFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RR 193
K G + A L K+M P VV Y +ID K + A LF M R
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKN---VNDALNLFTEMDNKGIRP 289
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLF 249
N V++ +I L G + +A L M ++ NVV +A+I F K+GK+ EA L+
Sbjct: 290 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 250 QQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
++ R DI +++ +I G+ + R +EA ++F M+ P+ + + +L
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSW 361
+D+G + + + + G + L+ + + ++++ F Q PDI+++
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
+ ++ + A F+ + + PD T+ ++ C+AGK+++ +LF +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF-CSLS 528
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G+ P Y ++ R G + A + R
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 165/349 (47%), Gaps = 27/349 (7%)
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCDAQ 150
P ++V ++ +++ + + D + M N +Y+ +I+ F + +L A
Sbjct: 77 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLAL 136
Query: 151 RLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMI 202
+ +M P++V+ +++G+ G I+ A +L M + + ++ +I
Sbjct: 137 AVLAKMMKLGYEPDIVTLNSLLNGFC---HGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 203 NGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
+GL + EA L RM Q ++V ++ G CK+G +D A +L +++ I
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 259 S----WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
+N +I +ALNLF++M G++P+ + + SL + +
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ----TSQPDIVSWNTIIAAFAQ 370
+ +I+ + ++ +AL+ + K G +V++E + + + PDI +++++I F
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
H +A+ F+ MI+ P+ +T+ +L+ C+A ++DE M LF M
Sbjct: 374 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM 422
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 214/473 (45%), Gaps = 86/473 (18%)
Query: 51 GNITAA----RQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRAL---FDAMPMKNVVSWN 103
G +T A R V ++ +V+ N +L SR L D P NVV++
Sbjct: 231 GEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFC 290
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCP 159
++ G + +D AF+ F M +R + +Y+ +I G+ K G L +LF +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 160 ----NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLY 211
+VV ++ ID YVK G +A A ++ M + N V++T++I GL ++G
Sbjct: 351 GVKLDVVVFSSTIDVYVK---SGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 212 EEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLF------------------ 249
EA+ ++G++ ++ ++V +++I GFCK G + + L+
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVL 467
Query: 250 ----------------------QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTG 287
Q IR ++ +N +I G+ + R +EAL +F M G
Sbjct: 468 VDGLSKQGLMLHAMRFSVKMLGQSIRL-NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 288 MQPDDLIFVSLFTACASLALLDQ----------GRQTYALVIKHGFDSDLSVNNALVTMY 337
++PD V+ FT +++++ G Q + L+ ++ +D++V N ++ +
Sbjct: 527 IKPD----VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582
Query: 338 SKCGSIVDSELAFGQ----TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
KC I D+ F +PDIV++NT+I + +A F+ + P+
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
+T L+ V C+ +D ++ +F++M + G P + Y CL+D S++ ++
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMA-EKGSKPNAVTYGCLMDWFSKSVDIE 694
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 200/443 (45%), Gaps = 42/443 (9%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
I + +AG + ++F + K DVV ++S + Y SG + ++ M +
Sbjct: 328 IDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGI 387
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQR 151
NVV++ ++ G Q+ + EAF + + +R + +Y+++I GF K G L
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 152 LFKEM-----PCPNVVSYTVMIDGYVKVKEGGGIARAR---ALFDAMPRRNEVSWTVMIN 203
L+++M P P+VV Y V++DG K +G + R + R N V + +I+
Sbjct: 448 LYEDMIKMGYP-PDVVIYGVLVDGLSK--QGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 204 GLVENGLYEEAWELFGRMPQKNVVASTAMIT----------GFCKQGKVDEAWTLFQQIR 253
G ++EA ++F M + A T FCK K LF ++
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ 564
Query: 254 ----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
DIA N++I + R E+A F+ ++ M+PD + + ++ SL LD
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKC----GSIVDSELAFGQTSQPDIVSWNTII 365
+ + + L+ F + L+ + K G+I + + S+P+ V++ ++
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
F++ V + F++M G+ P +++ ++ C+ G++DE+ N+F+ + D +
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKL 743
Query: 426 PPRSEHYACLVDVMSRAGQLQRA 448
P YA L+ + G+L A
Sbjct: 744 LPDVVAYAILIRGYCKVGRLVEA 766
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 33/283 (11%)
Query: 44 IAAFSRAGNITAARQVFDKMP----TKDVVTWNS-MLTAYWHSGFPQHSRA-----LFDA 93
I + R A +VF M DV T+ + M + F +H + LFD
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 94 MPMKNVVSWNAMVAGCVQNDM-----LDEAFNYFAAMPE----RNAASYNAMISGFIKFG 144
M +N +S + V V + + +++A +F + E + +YN MI G+
Sbjct: 563 M-QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLR 621
Query: 145 RLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALF-DAMPRRNEVSWT 199
RL +A+R+F+ + PN V+ T++I K + G R ++ + + N V++
Sbjct: 622 RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYG 681
Query: 200 VMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQ-IRC 254
+++ ++ E +++LF M +K ++V+ + +I G CK+G+VDEA +F Q I
Sbjct: 682 CLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDA 741
Query: 255 R---DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLI 294
+ D+ ++ I+I GY + GR EA L+ M+R G++PDDL+
Sbjct: 742 KLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLL 784
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 171/374 (45%), Gaps = 43/374 (11%)
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAMVAGCVQND 113
Q+ + +VT++S++ + G + AL++ M +VV + +V G +
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 114 MLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYT 165
++ A + M + N +N++I G+ + R +A ++F+ M P+V ++T
Sbjct: 476 LMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFT 535
Query: 166 ------VMIDGYVK-VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLY-----EE 213
+M D + K +K G+ LFD M +RN++S + + +V + L+ E+
Sbjct: 536 TVMRVSIMEDAFCKHMKPTIGLQ----LFDLM-QRNKISADIAVCNVVIHLLFKCHRIED 590
Query: 214 AWELF-----GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMI 264
A + F G+M + ++V MI G+C ++DEA +F+ ++ + + I+I
Sbjct: 591 ASKFFNNLIEGKM-EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILI 649
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
+N + A+ +FS M G +P+ + + L + ++ + + + + G
Sbjct: 650 HVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGIS 709
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSY 380
+ + ++ K G + ++ F Q PD+V++ +I + + +A
Sbjct: 710 PSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALL 769
Query: 381 FDQMIAVGVRPDGI 394
++ M+ GV+PD +
Sbjct: 770 YEHMLRNGVKPDDL 783
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 142/356 (39%), Gaps = 66/356 (18%)
Query: 44 IAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
I F + GN+ + +++ M DVV + ++ G H+ M +
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----------------------------- 126
NVV +N+++ G + + DEA F M
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK 552
Query: 127 -----------ERNAASY-----NAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTV 166
+RN S N +I K R+ DA + F + P++V+Y
Sbjct: 553 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 167 MIDGYVKVKEGGGIARARALFDAMP-RRNEVSWTVMINGLVENGLYEEAWELFGRMPQK- 224
MI GY ++ R L P N V+ T++I+ L +N + A +F M +K
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Query: 225 ---NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEAL 277
N V ++ F K ++ ++ LF++++ + I+ S++I+I G + GR +EA
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732
Query: 278 NLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
N+F Q + + PD + + L + L + Y ++++G D + AL
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 114/260 (43%), Gaps = 17/260 (6%)
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVVASTAMITGF------CKQGKVDEAWTLFQQIRC 254
M+N L+ + + + F ++ + + S GF CK G+V +A + +
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCK-GEVTKALDFHRLVME 245
Query: 255 RD----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
R I S N ++ G + + + E A L S ++ G P+ + F +L +D+
Sbjct: 246 RGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP----DIVSWNTIIA 366
+ ++ + G + DL + L+ Y K G + F Q D+V +++ I
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
+ + A + +M+ G+ P+ +T+ L+ C+ G+I E+ ++ ++ G+
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-RGME 423
Query: 427 PRSEHYACLVDVMSRAGQLQ 446
P Y+ L+D + G L+
Sbjct: 424 PSIVTYSSLIDGFCKCGNLR 443
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 175/381 (45%), Gaps = 31/381 (8%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAMVAGCVQNDMLDEAFNYF 122
D+VT+ +++ G P + L + M +VV ++ ++ + +D+A N F
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263
Query: 123 AAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMIDGYVKV 174
M + + +Y+++IS +GR DA RL +M PNVV++ +ID + K
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAK- 322
Query: 175 KEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKN----V 226
G + A LFD M +R N V++ +ING + +EA ++F M K+ V
Sbjct: 323 --EGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDV 380
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQ 282
V +I GFCK KV + LF+ + R + ++ +I G+ Q + A +F Q
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
MV G+ P+ + + +L L++ + + K + D+ N + K G
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 343 IVDSELAFGQTS----QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
+ D F S +PD++++NT+I+ F + L +A + F +M G PD T+ +
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 399 LLSVCCRAGKIDESMNLFNLM 419
L+ R G S L M
Sbjct: 561 LIRAHLRDGDKAASAELIKEM 581
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 157/312 (50%), Gaps = 34/312 (10%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSG-FPQHSRALFDAMPMK- 97
I + + ++ A +F +M K DV T++S+++ + G + SR L D + K
Sbjct: 247 IDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKI 306
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQR 151
NVV++N+++ + L EA F M +R N +YN++I+GF RL +AQ+
Sbjct: 307 NPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 152 LFKEM---PC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMIN 203
+F M C P+VV+Y +I+G+ K K+ + LF M RR N V++T +I+
Sbjct: 367 IFTLMVSKDCLPDVVTYNTLINGFCKAKK---VVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 204 GLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR---- 255
G + + A +F +M N++ ++ G CK GK+++A +F+ ++
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
DI ++NIM G + G+ E+ +LF + G++PD + + ++ + L ++ Y
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA---Y 540
Query: 316 ALVIKHGFDSDL 327
L IK D L
Sbjct: 541 TLFIKMKEDGPL 552
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 202/452 (44%), Gaps = 46/452 (10%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRA 89
S+++Y N+ I R ++ A + KM +VT NS+L + H + A
Sbjct: 97 SHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 90 LFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER--------NAASYNAMI 137
L D M + V++ +V G Q++ EA A+ ER + +Y A+I
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA----VALVERMVVKGCQPDLVTYGAVI 212
Query: 138 SGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP-- 191
+G K G A L +M +VV Y+ +ID K + + A LF M
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRH---VDDALNLFTEMDNK 269
Query: 192 --RRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEA 245
R + +++ +I+ L G + +A L M ++ NVV ++I F K+GK+ EA
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 246 WTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA 301
LF ++ R +I ++N +I G+ + R +EA +F+ MV PD + + +L
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 302 -CASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QP 356
C + ++D G + + + + G + L+ + + ++++ F Q P
Sbjct: 390 FCKAKKVVD-GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
+I+++NT++ ++ KA F+ + + PD T+ + C+AGK+++ +LF
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 417 NLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ G+ P Y ++ + G + A
Sbjct: 509 -CSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 173/379 (45%), Gaps = 55/379 (14%)
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQ 150
P ++V ++ +++ + D ++ M N +YN MI+ + +L A
Sbjct: 61 PFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFAL 120
Query: 151 RLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMI 202
+ +M P++V+ +++G+ G I+ A AL D M + + V++T ++
Sbjct: 121 AILGKMMKLGYGPSIVTLNSLLNGFC---HGNRISEAVALVDQMVEMGYQPDTVTFTTLV 177
Query: 203 NGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC---- 254
+GL ++ EA L RM Q ++V A+I G CK+G+ D A L ++
Sbjct: 178 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 237
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
D+ ++ +I + ++ALNLF++M G++PD + SL + L + GR
Sbjct: 238 ADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC-----LCNYGR-- 290
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLY 374
+S ++ L + P++V++N++I AFA+
Sbjct: 291 ----------------------WSDASRLLSDMLE--RKINPNVVTFNSLIDAFAKEGKL 326
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
+A FD+MI + P+ +T+ SL++ C ++DE+ +F LMV +P Y
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVT-YNT 385
Query: 435 LVDVMSRAGQLQRACEIIR 453
L++ +A ++ E+ R
Sbjct: 386 LINGFCKAKKVVDGMELFR 404
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 43/187 (22%)
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD------------------------ 309
+EA++LF +MV++ P + F L +A A + D
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIM 106
Query: 310 ------QGRQTYALVI-----KHGFDSDLSVNNALVTMY------SKCGSIVDSELAFGQ 352
+ + ++AL I K G+ + N+L+ + S+ ++VD + G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
QPD V++ T++ QH +A + ++M+ G +PD +T+ ++++ C+ G+ D +
Sbjct: 167 --QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 413 MNLFNLM 419
+NL N M
Sbjct: 225 LNLLNKM 231
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 185/398 (46%), Gaps = 35/398 (8%)
Query: 54 TAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAM 105
+ A + D+M K D+VT+ ++ G + L + M V+ +N +
Sbjct: 203 SEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTI 262
Query: 106 VAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMP---- 157
+ G + +D+A N F M + N +Y+++IS +GR DA RL +M
Sbjct: 263 IDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI 322
Query: 158 CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE----VSWTVMINGLVENGLYEE 213
P+V +++ +ID +VK G + A L+D M +R+ V+++ +ING + +E
Sbjct: 323 NPDVFTFSALIDAFVK---EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379
Query: 214 AWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMIT 265
A ++F M K +VV +I GFCK +V+E +F+++ R + ++NI+I
Sbjct: 380 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 439
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
G Q G + A +F +MV G+ P+ + + +L L++ + + + +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQHVLYYKARSYF 381
+ N ++ K G + D F S +PD+V++NT+I+ F + +A + F
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 559
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+M G P+ + +L+ R G + S L M
Sbjct: 560 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 201/441 (45%), Gaps = 34/441 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
+ + + I+ A + D+M + VT+N+++ + + AL D M K
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGC 217
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR 151
++V++ +V G + D AFN M E YN +I G K+ + DA
Sbjct: 218 QPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
Query: 152 LFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR---NEVSWTVMING 204
LFKEM PNVV+Y+ +I G +R L D + R+ + +++ +I+
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNY--GRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 205 LVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR----D 256
V+ G EA +L+ M ++++ V +++I GFC ++DEA +F+ + + D
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ ++N +I G+ + R EE + +F +M + G+ + + + L D ++ +
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG--QTS--QPDIVSWNTIIAAFAQHV 372
++ G ++ N L+ K G + + + F Q S +P I ++N +I +
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHY 432
F + GV+PD + + +++S CR G +E+ LF M D G P S Y
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-GTLPNSGCY 574
Query: 433 ACLVDVMSRAGQLQRACEIIR 453
L+ R G + + E+I+
Sbjct: 575 NTLIRARLRDGDREASAELIK 595
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 143/285 (50%), Gaps = 33/285 (11%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALF 91
DV+ + I AF + G + A +++D+M + +VT++S++ + ++ +F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 92 DAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKF 143
+ M K +VV++N ++ G + ++E F M +R N +YN +I G +
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 144 GRLCD-AQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE--- 195
G CD AQ +FKEM PN+++Y ++DG K G + +A +F+ + R
Sbjct: 445 GD-CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK---NGKLEKAMVVFEYLQRSKMEPT 500
Query: 196 -VSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQ 250
++ +MI G+ + G E+ W+LF + K +VVA MI+GFC++G +EA LF+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 560
Query: 251 QIR----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPD 291
+++ + +N +I ++G E + L +M G D
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 186/393 (47%), Gaps = 32/393 (8%)
Query: 89 ALFDAM----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGF 140
ALF M P +++ ++ +++ + + D + M N +Y+ +I+ F
Sbjct: 67 ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 126
Query: 141 IKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PR 192
+ +L A + +M PN+V+ + +++GY K I+ A AL D M +
Sbjct: 127 CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKR---ISEAVALVDQMFVTGYQ 183
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTL 248
N V++ +I+GL + EA L RM Q ++V ++ G CK+G D A+ L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 249 FQQIRCRDIAS----WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
++ + +N +I G + ++ALNLF +M G++P+ + + SL + +
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVS 360
+ + +I+ + D+ +AL+ + K G +V++E + + + P IV+
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
++++I F H +A+ F+ M++ PD +T+ +L+ C+ +++E M +F M
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G+ + Y L+ + +AG A EI +
Sbjct: 424 Q-RGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 163/342 (47%), Gaps = 24/342 (7%)
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIAR 182
E N + +++++G+ R+ +A L +M PN V++ +I G + +
Sbjct: 148 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKA---SE 204
Query: 183 ARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMIT 234
A AL D M + + V++ V++NGL + G + A+ L +M Q V+ +I
Sbjct: 205 AMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIID 264
Query: 235 GFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
G CK +D+A LF+++ + ++ +++ +I+ GR +A L S M+ + P
Sbjct: 265 GLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINP 324
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
D F +L A L + + Y ++K D + ++L+ + + +++ F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 351 ----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
+ PD+V++NT+I F ++ + F +M G+ + +T+ L+ +A
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
G D + +F MV D G+PP Y L+D + + G+L++A
Sbjct: 445 GDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKA 485
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 43/260 (16%)
Query: 203 NGLVENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA 258
NGL E L ++A LFG M P +++ + +++ K K D +L +Q++ I
Sbjct: 55 NGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIP 113
Query: 259 ----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CASLALLDQGRQ 313
+++I+I + + + AL + +M++ G +P+ + SL C S R
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHS------KRI 167
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVL 373
+ A+ + V+ VT Y QP+ V++NT+I H
Sbjct: 168 SEAVAL---------VDQMFVTGY-----------------QPNTVTFNTLIHGLFLHNK 201
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
+A + D+M+A G +PD +T+ +++ C+ G D + NL N M + P Y
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQG-KLEPGVLIYN 260
Query: 434 CLVDVMSRAGQLQRACEIIR 453
++D + + + A + +
Sbjct: 261 TIIDGLCKYKHMDDALNLFK 280
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 174/354 (49%), Gaps = 31/354 (8%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFD---AMPMK-NVVSWNAMVAGCVQNDMLDEAFNYF 122
D+VT+ S+L Y H + + ALFD M K NVV++ ++ +N L+ A F
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 123 AAM----PERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKV 174
M N +YNA+++G + GR DA L ++M PNV+++T +ID +VKV
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 175 KEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NV 226
G + A+ L++ M + + ++ +INGL GL +EA ++F M + N
Sbjct: 272 ---GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNE 328
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQ 282
V T +I GFCK +V++ +F ++ + + ++ ++I GY GR + A +F+Q
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
M PD + L +++ + + K D ++ ++ K G
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 343 IVDS-EL---AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
+ D+ +L F + +P+++++ T+I+ F + L ++A S F +M G P+
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 133/264 (50%), Gaps = 29/264 (10%)
Query: 57 RQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAMVAGCVQN 112
R + + +V+T+ +++ A+ G ++ L++ M +V ++ +++ G
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMY 306
Query: 113 DMLDEAFNYFAAMPERNAAS-----YNAMISGFIKFGRLCDAQRLFKEMP----CPNVVS 163
+LDEA F M ERN Y +I GF K R+ D ++F EM N ++
Sbjct: 307 GLLDEARQMFYLM-ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 164 YTVMIDGYVKVKEGGGIARARALFDAMPRRNEV----SWTVMINGLVENGLYEEAWELFG 219
YTV+I GY V G A+ +F+ M R ++ V+++GL NG E+A +F
Sbjct: 366 YTVLIQGYCLV---GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 220 RMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNG 271
M ++ N+V T +I G CK GKV++A+ LF + + ++ ++ MI+G+ + G
Sbjct: 423 YMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 482
Query: 272 RGEEALNLFSQMVRTGMQPDDLIF 295
EA +LF +M G P++ ++
Sbjct: 483 LIHEADSLFKKMKEDGFLPNESVY 506
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 19/277 (6%)
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEA 214
P++V++T +++GY I A ALFD + + N V++T +I L +N A
Sbjct: 151 PDLVTFTSLLNGYCHWNR---IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 215 WELFGRM----PQKNVVASTAMITGFCKQGK-VDEAWTLFQQIRCR---DIASWNIMITG 266
ELF +M + NVV A++TG C+ G+ D AW L ++ R ++ ++ +I
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+ + G+ EA L++ M++ + PD + SL LLD+ RQ + L+ ++G +
Sbjct: 268 FVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPN 327
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV----SWNTIIAAFAQHVLYYKARSYFD 382
+ L+ + K + D F + SQ +V ++ +I + A+ F+
Sbjct: 328 EVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFN 387
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
QM + PD T+ LL C GK+++++ +F M
Sbjct: 388 QMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 131/299 (43%), Gaps = 49/299 (16%)
Query: 200 VMINGLVENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIR-- 253
++ NGL N + +A +LF RM P +++ T +++ K + D +LF+Q++
Sbjct: 54 ILRNGL-HNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112
Query: 254 ----------------------CR---------------DIASWNIMITGYAQNGRGEEA 276
CR D+ ++ ++ GY R E+A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
+ LF Q++ G +P+ + + +L L+ + + + +G ++ NALVT
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232
Query: 337 YSKCGSIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
+ G D+ + +P+++++ +I AF + +A+ ++ MI + V PD
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPD 292
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
T+ SL++ C G +DE+ +F LM + G P Y L+ ++ +++ +I
Sbjct: 293 VFTYGSLINGLCMYGLLDEARQMFYLMERN-GCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/237 (19%), Positives = 109/237 (45%), Gaps = 9/237 (3%)
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALN 278
+ ++V T+++ G+C ++++A LF QI ++ ++ +I +N A+
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
LF+QM G +P+ + + +L T + ++K + ++ AL+ +
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 339 KCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
K G +++++ + Q PD+ ++ ++I + L +AR F M G P+ +
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 395 TFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ +L+ C++ ++++ M +F M G+ + Y L+ G+ A E+
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQK-GVVANTITYTVLIQGYCLVGRPDVAQEV 385
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 92/207 (44%), Gaps = 13/207 (6%)
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
R +S+ ++ N + +AL+LF++MV + P + F L + A + D
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGS--------IVDSELAFGQTSQPDIVSWNTIIA 366
+ + G L N + M+ C S + + G +PD+V++ +++
Sbjct: 106 FEQMQILGIPPLLCTCN--IVMHCVCLSSQPCRASCFLGKMMKLG--FEPDLVTFTSLLN 161
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
+ A + FDQ++ +G +P+ +T+ +L+ C+ ++ ++ LFN M + G
Sbjct: 162 GYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN-GSR 220
Query: 427 PRSEHYACLVDVMSRAGQLQRACEIIR 453
P Y LV + G+ A ++R
Sbjct: 221 PNVVTYNALVTGLCEIGRWGDAAWLLR 247
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 120/446 (26%), Positives = 197/446 (44%), Gaps = 66/446 (14%)
Query: 6 IVSIALKPTPSSTARHTHFLLVFAKHFS----SYDVYRANLNIAAFSRAGNITAARQVFD 61
IV T ++ R ++ F++ S+D+Y + I F R ++ A V
Sbjct: 71 IVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLG 130
Query: 62 KMPT----KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQND 113
KM +VT+ S+L + + +L M NVV +N ++ G +N
Sbjct: 131 KMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNG 190
Query: 114 MLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYT 165
L+ A M ++ + +YN +++G GR DA R+ ++M P+VV++T
Sbjct: 191 ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFT 250
Query: 166 VMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRM 221
+ID +VK G + A+ L+ M + N V++ +INGL +G +A + F M
Sbjct: 251 ALIDVFVK---QGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 222 PQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRG 273
K NVV +I+GFCK VDE LFQ++ C DI ++N +I GY Q G+
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
AL++F MV + PD + T C ++ HG L VN +
Sbjct: 368 RVALDIFCWMVSRRVTPD------IITHC---------------ILLHG----LCVNGEI 402
Query: 334 VTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDG 393
+ K + +SE G IV++N +I + KA F ++ GV+PD
Sbjct: 403 ESALVKFDDMRESEKYIG------IVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456
Query: 394 ITFLSLLSVCCRAGKIDESMNLFNLM 419
T+ ++ C+ G E+ L M
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRM 482
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 125/261 (47%), Gaps = 30/261 (11%)
Query: 55 AARQVFDKMP---TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVA 107
AAR + D M DVVT+ +++ + G ++ L+ M +V V++N+++
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 108 GCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCP---- 159
G + L +A F M + N +YN +ISGF KF + + +LF+ M C
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAW 215
++ +Y +I GY +V G + A +F M R + ++ ++++GL NG E A
Sbjct: 350 DIFTYNTLIHGYCQV---GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 216 ELFGRMPQKN----VVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGY 267
F M + +VA MI G CK KV++AW LF ++ D ++ IMI G
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 268 AQNGRGEEALNLFSQMVRTGM 288
+NG EA L +M G+
Sbjct: 467 CKNGPRREADELIRRMKEEGI 487
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 184/438 (42%), Gaps = 61/438 (13%)
Query: 76 TAYWHSGFPQHSRALFDAM----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE---- 127
T + HS + + ALF M P+ ++V + ++ N E YF+ E
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTA-TANLRRYETVIYFSQKMELYGI 102
Query: 128 -RNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKE-GGGIA 181
+ S+ +I F + RL A + +M P++V++ ++ G+ V G +
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFC 237
+ + N V + +I+GL +NG A EL M +K +VV ++TG C
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 238 KQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
G+ +A + + + R D+ ++ +I + + G +EA L+ +M+++ + P+++
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+ S+ L ++T+ L+ G ++ N L++ + K + + F +
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 354 S----QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
S DI ++NT+I + Q A F M++ V PD IT LL C G+I
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEI 402
Query: 410 DESMNLF---------------NLMVHDY-------------------GIPPRSEHYACL 435
+ ++ F N+M+H G+ P + Y +
Sbjct: 403 ESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIM 462
Query: 436 VDVMSRAGQLQRACEIIR 453
+ + + G + A E+IR
Sbjct: 463 ILGLCKNGPRREADELIR 480
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 103/240 (42%), Gaps = 58/240 (24%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDV----VTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
I F + GN+ A++++ +M V VT+NS++ G ++ FD M K
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR 151
NVV++N +++G + M+DE F M + +YN +I G+ + G+L A
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 152 LFKEMP------------------CPN---------------------VVSYTVMIDGYV 172
+F M C N +V+Y +MI G
Sbjct: 373 IFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLC 432
Query: 173 KVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVA 228
K + + +A LF +P + + ++T+MI GL +NG EA EL RM ++ ++
Sbjct: 433 KADK---VEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIIC 489
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 186/415 (44%), Gaps = 62/415 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRALF 91
D+Y N+ I F ++ A + KM D VT S++ + + +L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 92 DAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKF 143
D M ++V++NA++ + +++AF++F + + N +Y A+++G
Sbjct: 179 DKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 144 GRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NE 195
R DA RL +M PNV++Y+ ++D +VK G + A+ LF+ M R +
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVK---NGKVLEAKELFEEMVRMSIDPDI 295
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQ 251
V+++ +INGL + +EA ++F M K +VV+ +I GFCK +V++ LF++
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 252 IRCRDIAS----WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+ R + S +N +I G+ Q G ++A FSQM G+ PD + L L
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGG-----L 410
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
D G ALVI + DIV++ T+I
Sbjct: 411 CDNGELEKALVIFEDMQK--------------------------REMDLDIVTYTTVIRG 444
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
+ +A S F + G++PD +T+ +++S C G + E L+ M +
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 162/369 (43%), Gaps = 74/369 (20%)
Query: 44 IAAFSRAGNITAARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
+ F R ++ A + DKM D+V +N+++ + + + F + K
Sbjct: 162 VNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGI 221
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQR 151
NVV++ A+V G + +A + M ++ N +Y+A++ F+K G++ +A+
Sbjct: 222 RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
Query: 152 LFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMIN 203
LF+EM P++V+Y+ +I+G I A +FD M + + VS+ +IN
Sbjct: 282 LFEEMVRMSIDPDIVTYSSLINGLCLHDR---IDEANQMFDLMVSKGCLADVVSYNTLIN 338
Query: 204 GLVENGLYEEAWELFGRMPQKNVVASTA-------------------------------- 231
G + E+ +LF M Q+ +V++T
Sbjct: 339 GFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISP 398
Query: 232 -------MITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLF 280
++ G C G++++A +F+ ++ R DI ++ +I G + G+ EEA +LF
Sbjct: 399 DIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 458
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF--------DSDLSVNNA 332
+ G++PD + + ++ + + LL + Y + + G D D++++
Sbjct: 459 CSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAE 518
Query: 333 LVTMYSKCG 341
L+ CG
Sbjct: 519 LIKKMLSCG 527
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 158/325 (48%), Gaps = 22/325 (6%)
Query: 145 RLCDAQRLFKEM----PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV-SWT 199
+L DA LF +M P P++V + ++ VK+K+ + + + RN++ ++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 200 VMINGLVENGLYEEAWELFGRM------PQKNVVASTAMITGFCKQGKVDEAWTLFQQI- 252
++IN A + G+M P + + S ++ GFC++ +V +A +L ++
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS--LVNGFCRRNRVSDAVSLVDKMV 182
Query: 253 ---RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
DI ++N +I + R +A + F ++ R G++P+ + + +L + +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ----TSQPDIVSWNTII 365
+ + +IK ++ +AL+ + K G +++++ F + + PDIV+++++I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
H +A FD M++ G D +++ +L++ C+A ++++ M LF M G+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ-RGL 361
Query: 426 PPRSEHYACLVDVMSRAGQLQRACE 450
+ Y L+ +AG + +A E
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQE 386
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/289 (19%), Positives = 120/289 (41%), Gaps = 57/289 (19%)
Query: 213 EAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRC----RDIASWNIMI 264
+A +LF M P ++V +++ K K D +L +++ D+ ++NI+I
Sbjct: 68 DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
+ + AL++ +M++ G +PD + SL + +++ G+
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----------------------------- 355
D+ NA++ K + D+ F + +
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 356 ----------PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
P++++++ ++ AF ++ +A+ F++M+ + + PD +T+ SL++ C
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 406 AGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIRL 454
+IDE+ +F+LMV CL DV+S + C+ R+
Sbjct: 308 HDRIDEANQMFDLMVSK----------GCLADVVSYNTLINGFCKAKRV 346
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 183/395 (46%), Gaps = 45/395 (11%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRAL 90
+++ N+ + F R ++ A KM +VT+ S+L + + +
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYM 173
Query: 91 FDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIK 142
FD M NVV +N ++ G ++ +D A + M + + +YN++ISG
Sbjct: 174 FDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCS 233
Query: 143 FGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----N 194
GR DA R+ M P+V ++ +ID VK G ++ A ++ M RR +
Sbjct: 234 SGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK---EGRVSEAEEFYEEMIRRSLDPD 290
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLF- 249
V+++++I GL +EA E+FG M K +VV + +I G+CK KV+ LF
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 250 ---QQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
Q+ R+ ++ I+I GY + G+ A +F +MV G+ P+ + + L
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH-----G 405
Query: 307 LLDQGRQTYALVI-----KHGFDSDLSVNNALVTMYSKCGSIVDSELAF----GQTSQPD 357
L D G+ ALVI K+G D+D+ N ++ K G + D+ + Q PD
Sbjct: 406 LCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
Query: 358 IVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
I ++ T++ + L +A + F +M G+ P+
Sbjct: 466 IWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 163/386 (42%), Gaps = 59/386 (15%)
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMIDGYVKVKE- 176
F+ N + Y M+ I+F +L D+ LF M P P++ ++ ++ K+K+
Sbjct: 38 FSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKY 97
Query: 177 ---------------GGGIARARALFDAMPRRNEVSWTV--------------------M 201
+ L + R +++S + +
Sbjct: 98 DVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSL 157
Query: 202 INGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR-- 255
+NG +A +F +M + NVV +I G CK +VD A L ++
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGI 217
Query: 256 --DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
D+ ++N +I+G +GR +A + S M + + PD F +L AC + + +
Sbjct: 218 GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 314 TYALVIKHGFDSDLSVNNALV---TMYSKCGSIVDSELAFG----QTSQPDIVSWNTIIA 366
Y +I+ D D+ + L+ MYS+ + ++E FG + PD+V+++ +I
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSR---LDEAEEMFGFMVSKGCFPDVVTYSILIN 334
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
+ + F +M GV + +T+ L+ CRAGK++ + +F MV G+
Sbjct: 335 GYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF-CGVH 393
Query: 427 PRSEHYACLVDVMSRAGQLQRACEII 452
P Y L+ + G++++A I+
Sbjct: 394 PNIITYNVLLHGLCDNGKIEKALVIL 419
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 158/343 (46%), Gaps = 27/343 (7%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIKFGRLCDAQRLF 153
N+ + N ++ + L A ++ M E + ++ ++++GF + R+ DA +F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 154 KEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
+M PNVV Y +IDG K K+ + A L + M + + V++ +I+GL
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQ---VDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
+G + +A + M ++ +V A+I K+G+V EA ++++ R DI
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+++++I G R +EA +F MV G PD + + L ++ G + +
Sbjct: 292 VTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCE 351
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQHVL 373
+ + G + L+ Y + G + +E F + P+I+++N ++ +
Sbjct: 352 MSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGK 411
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
KA M G+ D +T+ ++ C+AG++ ++ +++
Sbjct: 412 IEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 176/381 (46%), Gaps = 31/381 (8%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAMVAGCVQNDMLDEAFNYF 122
D+VT+ +++ G + +L M +VV +N ++ G + +D+A N F
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 123 AAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKV 174
M + + +Y+++IS +GR DA RL +M PNVV+++ +ID +VK
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVK- 340
Query: 175 KEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NV 226
G + A L+D M +R + +++ +ING + +EA +F M K NV
Sbjct: 341 --EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQ 282
V + +I GFCK +V+E LF+++ R + ++ +I G+ Q + A +F Q
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
MV G+ P+ L + L L + + + + + D+ N ++ K G
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 343 IVDSELAFGQTS----QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
+ D F S P+++++NT+I+ F + +A S +M G P+ T+ +
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 399 LLSVCCRAGKIDESMNLFNLM 419
L+ R G + S L M
Sbjct: 579 LIRARLRDGDREASAELIKEM 599
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 206/453 (45%), Gaps = 38/453 (8%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRA 89
S+D+Y ++ I F R ++ A V KM D+VT +S+L Y HS + A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 90 LFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFI 141
L D M + ++ ++ G ++ EA M +R + +Y +++G
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 142 KFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RR 193
K G + A L K+M +VV Y +IDG K K + A LF M R
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKH---MDDALNLFTEMDNKGIRP 291
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLF 249
+ +++ +I+ L G + +A L M ++ NVV +A+I F K+GK+ EA L+
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 250 QQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
++ R DI +++ +I G+ + R +EA ++F M+ P+ + + +L
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSW 361
+++G + + + + G + L+ + + ++++ F Q P+I+++
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF-NLMV 420
N ++ ++ KA F+ + + PD T+ ++ C+AGK+++ LF NL +
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G+ P Y ++ R G + A +++
Sbjct: 532 K--GVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 172/349 (49%), Gaps = 27/349 (7%)
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQ 150
P ++V +N +++ + + + + M + +Y+ I+ F + +L A
Sbjct: 79 PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138
Query: 151 RLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMI 202
+ +M P++V+ + +++GY K I+ A AL D M + + ++T +I
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKR---ISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 203 NGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRC---- 254
+GL + EA L +M Q+ ++V ++ G CK+G +D A +L +++
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
D+ +N +I G + ++ALNLF++M G++PD + SL + + +
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ----TSQPDIVSWNTIIAAFAQ 370
+ +I+ + ++ +AL+ + K G +V++E + + + PDI +++++I F
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
H +A+ F+ MI+ P+ +T+ +L+ C+A +++E M LF M
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM 424
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/427 (27%), Positives = 202/427 (47%), Gaps = 79/427 (18%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRAL 90
+D+Y N+ I R A V KM DVVT +S++ +GF Q +R +
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLI-----NGFCQGNR-V 155
Query: 91 FDAMPM----------KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERN-----AASYNA 135
FDA+ + +VV +N ++ G + ++++A F M ER+ A +YN+
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM-ERDGVRADAVTYNS 214
Query: 136 MISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP 191
+++G GR DA RL ++M PNV+++T +ID +VK G + A L++ M
Sbjct: 215 LVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVK---EGKFSEAMKLYEEMT 271
Query: 192 RR----NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVD 243
RR + ++ +INGL +G +EA ++ M K +VV +I GFCK +VD
Sbjct: 272 RRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 244 EAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLF 299
E LF+++ R D ++N +I GY Q GR + A +FS+M +P+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPN-------- 380
Query: 300 TACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIV 359
+TY++++ +G + V ALV ++ SE+ DI
Sbjct: 381 ------------IRTYSILL-YGLCMNWRVEKALVLF----ENMQKSEIEL------DIT 417
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
++N +I + A F + G++PD +++ +++S CR + D+S L+ M
Sbjct: 418 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKM 477
Query: 420 VHDYGIP 426
D +P
Sbjct: 478 QEDGLLP 484
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 150/318 (47%), Gaps = 22/318 (6%)
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLV 206
++ + P P++V ++ ++ K K + +LF M + S+ ++IN L
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVI---SLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 207 ENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIA 258
+ A + G+M + +VV +++I GFC+ +V +A L ++ D+
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVV 175
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA-CASLALLDQGRQTYAL 317
+N +I G + G +A+ LF +M R G++ D + + SL C S D R +
Sbjct: 176 IYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDM 235
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVL 373
V++ + ++ A++ ++ K G ++ + + ++ PD+ ++N++I H
Sbjct: 236 VMRDIVPNVITFT-AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYA 433
+A+ D M+ G PD +T+ +L++ C++ ++DE LF M G+ + Y
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ-RGLVGDTITYN 353
Query: 434 CLVDVMSRAGQLQRACEI 451
++ +AG+ A EI
Sbjct: 354 TIIQGYFQAGRPDAAQEI 371
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 213/445 (47%), Gaps = 35/445 (7%)
Query: 29 AKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFP 84
A + S+Y N+ I RAG + A ++ D M +V T N M+ S
Sbjct: 374 APNLSTY-----NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKL 428
Query: 85 QHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAM 136
+ A+F+ M K + +++ +++ G + +D+A+ + M + N+ Y ++
Sbjct: 429 DEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSL 488
Query: 137 ISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVK-EGGGIARARALFDAMPRRNE 195
I F GR D +++K+M N +++ Y+ + G + RA+F+ + R
Sbjct: 489 IKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRF 548
Query: 196 V----SWTVMINGLVENGLYEEAWELFGRMPQKNVVASTA----MITGFCKQGKVDEAWT 247
V S++++I+GL++ G E +ELF M ++ V T +I GFCK GKV++A+
Sbjct: 549 VPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 248 LFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
L ++++ + + ++ +I G A+ R +EA LF + ++ + +I+ SL
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 304 SLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIV 359
+ +D+ +++ G +L N+L+ K I ++ + F + P+ V
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 360 SWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
++ +I + + KA ++ +M G++P I++ +++S +AG I E+ LF+
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQ 444
+ G+P S Y +++ +S +
Sbjct: 789 KANGGVPD-SACYNAMIEGLSNGNR 812
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 128/273 (46%), Gaps = 31/273 (11%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
I +AG ++F M + D +N ++ + G + L + M K
Sbjct: 559 IHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGF 618
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR 151
VV++ +++ G + D LDEA+ F E N Y+++I GF K GR+ +A
Sbjct: 619 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 152 LFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVSWTVMIN 203
+ +E+ PN+ ++ ++D VK +E I A F +M N+V++ ++IN
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEE---INEALVCFQSMKELKCTPNQVTYGILIN 735
Query: 204 GLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR---- 255
GL + + +A+ + M ++ + ++ T MI+G K G + EA LF + +
Sbjct: 736 GLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
D A +N MI G + R +A +LF + R G+
Sbjct: 796 DSACYNAMIEGLSNGNRAMDAFSLFEETRRRGL 828
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 129/304 (42%), Gaps = 46/304 (15%)
Query: 159 PNVVSYTVMIDGYVK---VKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAW 215
P+V + M+ G VK ++EG + + F P + ++T +I +
Sbjct: 131 PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFS--AYTTLIGAFSAVNHSDMML 188
Query: 216 ELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGY 267
LF +M + V T +I GF K+G+VD A +L +++ DI +N+ I +
Sbjct: 189 TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSF 248
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+ G+ + A F ++ G++PD++ + S+ LD+ + + + K+
Sbjct: 249 GKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN------ 302
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
P ++NT+I + + +A S ++ A
Sbjct: 303 -------------------------RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G P I + +L+ + GK+DE++ +F M D P Y L+D++ RAG+L
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA--PNLSTYNILIDMLCRAGKLDT 395
Query: 448 ACEI 451
A E+
Sbjct: 396 AFEL 399
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 109/266 (40%), Gaps = 14/266 (5%)
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM----ITGFCKQGKVDEAWTLFQQIR 253
+T +I G + G + A L M ++ A + I F K GKVD AW F +I
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265
Query: 254 CR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
D ++ MI + R +EA+ +F + + P + ++ S D
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ---PDIVSWNTIIA 366
+ G + N ++T K G + ++ F + + P++ ++N +I
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILID 385
Query: 367 AFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI- 425
+ A D M G+ P+ T ++ C++ K+DE+ +F M DY +
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM--DYKVC 443
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEI 451
P + L+D + + G++ A ++
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKV 469
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 205/454 (45%), Gaps = 54/454 (11%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFD 92
Y NL I A + + AAR++FD+MP K + T+ ++ Y +G L +
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 93 AMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFG 144
AM + N V +N +V+ + D++ M E + ++N+ IS K G
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 145 RLCDAQRLFKEM--------PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEV 196
++ DA R+F +M P PN ++Y +M+ G+ KV G + A+ LF+++ +++
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV---GLLEDAKTLFESIRENDDL 323
Query: 197 ----SWTVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTL 248
S+ + + GLV +G + EA + +M K + S ++ G CK G + +A T+
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 249 FQQIR----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
++ C D ++ ++ GY G+ + A +L +M+R P+ L +
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQP-DIVSWNT 363
+ + + + + + G+ D VT C IVD G+ + +IV
Sbjct: 444 MGRISEAEELLRKMNEKGYGLD------TVT----CNIIVDGLCGSGELDKAIEIVKGMR 493
Query: 364 IIAAFAQHVLYYKARSYF----DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+ + A L SY D +I PD IT+ +LL+ C+AG+ E+ NLF M
Sbjct: 494 VHGSAALGNL---GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 420 VHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+ + + P S Y + + G++ A +++
Sbjct: 551 MGEK-LQPDSVAYNIFIHHFCKQGKISSAFRVLK 583
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/485 (22%), Positives = 205/485 (42%), Gaps = 80/485 (16%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKM--------PTKDVVTWNSMLTAYWHSGFPQHS 87
D+ N I+A + G + A ++F M P + +T+N ML + G + +
Sbjct: 251 DIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 88 RALFDAM----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISG 139
+ LF+++ + ++ S+N + G V++ EA M ++ SYN ++ G
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 140 FIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN- 194
K G L DA+ + M CP+ V+Y ++ GY V G + A++L M R N
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSV---GKVDAAKSLLQEMMRNNC 427
Query: 195 ---EVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWT 247
+ ++++ L + G EA EL +M +K + V ++ G C G++D+A
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 248 LFQQIRCR---------------------------DIASWNIMITGYAQNGRGEEALNLF 280
+ + +R D+ +++ ++ G + GR EA NLF
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 281 SQMVRTGMQPDDL---IFVSLFTACASLALLDQGRQTYALVI-----KHGFDSDLSVNNA 332
++M+ +QPD + IF+ F QG+ + A + K G L N+
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCK--------QGKISSAFRVLKDMEKKGCHKSLETYNS 599
Query: 333 LVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVG 388
L+ I + + + P+I ++NT I + A + D+M+
Sbjct: 600 LILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKN 659
Query: 389 VRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ P+ +F L+ C+ D + +F V G + Y+ + + + AGQL +A
Sbjct: 660 IAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG--QKEGLYSLMFNELLAAGQLLKA 717
Query: 449 CEIIR 453
E++
Sbjct: 718 TELLE 722
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 185/402 (46%), Gaps = 42/402 (10%)
Query: 86 HSRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYF----AAMPERNAASY--NAMISG 139
H+ L ++ + S ++V+ +++ +D+AF F + PE + Y N ++
Sbjct: 62 HNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLES 121
Query: 140 FIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR-- 193
IK R+ L+K+M P ++ ++I + + AR LFD MP +
Sbjct: 122 CIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALC---DSSCVDAARELFDEMPEKGC 178
Query: 194 --NEVSWTVMINGLVENGLYEEAWEL------FGRMPQKNVVASTAMITGFCKQGKVDEA 245
NE ++ +++ G + GL ++ EL FG +P K V +++ FC++G+ D++
Sbjct: 179 KPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNK--VIYNTIVSSFCREGRNDDS 236
Query: 246 WTLFQQIR----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRT---GM-QPDDLIFVS 297
+ +++R DI ++N I+ + G+ +A +FS M G+ +P+ + +
Sbjct: 237 EKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNL 296
Query: 298 LFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ-- 355
+ + LL+ + + + ++ + L N + + G +++E Q +
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 356 --PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
P I S+N ++ + + A++ M GV PD +T+ LL C GK+D +
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416
Query: 414 NLFNLMVHDYGIPPRSEHYAC--LVDVMSRAGQLQRACEIIR 453
+L M+ + +P Y C L+ + + G++ A E++R
Sbjct: 417 SLLQEMMRNNCLP---NAYTCNILLHSLWKMGRISEAEELLR 455
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 22/264 (8%)
Query: 205 LVENGLYEEAWELFGRMP----QKNVVAST-AMITGFCKQGKVDEAWTLFQQIRCR---- 255
LV ++EE EL + QK ++S ++++ F K +D+A+ FQ +R R
Sbjct: 49 LVRAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPEN 108
Query: 256 --DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQ 313
+ +N+++ + R E L+ MV G+ P F L A + +D R+
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 314 TYALVIKHGFDSDLSVNNALVTMYSKCG------SIVDSELAFGQTSQPDIVSWNTIIAA 367
+ + + G + LV Y K G ++++ +FG P+ V +NTI+++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL--PNKVIYNTIVSS 226
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD--YGI 425
F + + ++M G+ PD +TF S +S C+ GK+ ++ +F+ M D G+
Sbjct: 227 FCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL 286
Query: 426 P-PRSEHYACLVDVMSRAGQLQRA 448
P P S Y ++ + G L+ A
Sbjct: 287 PRPNSITYNLMLKGFCKVGLLEDA 310
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 204/438 (46%), Gaps = 33/438 (7%)
Query: 44 IAAFSRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV 99
I + S+ + A Q+ ++M D T+N ++ + + + M ++
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGF 318
Query: 100 ----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKE 155
+++ ++ G + +D A + F +P+ +N +I GF+ GRL DA+ + +
Sbjct: 319 APDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 156 MP-----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLV 206
M P+V +Y +I GY K G + A + M + N S+T++++G
Sbjct: 379 MVTSYGIVPDVCTYNSLIYGYWK---EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFC 435
Query: 207 ENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIR---CR-DIA 258
+ G +EA+ + M + N V +I+ FCK+ ++ EA +F+++ C+ D+
Sbjct: 436 KLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVY 495
Query: 259 SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALV 318
++N +I+G + + AL L M+ G+ + + + +L A + + R+ +
Sbjct: 496 TFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555
Query: 319 IKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLY 374
+ G D N+L+ + G + + F + + P +S N +I + +
Sbjct: 556 VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 375 YKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
+A + +M+ G PD +TF SL++ CRAG+I++ + +F + + GIPP + +
Sbjct: 616 EEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNT 674
Query: 435 LVDVMSRAGQLQRACEII 452
L+ + + G + AC ++
Sbjct: 675 LMSWLCKGGFVYDACLLL 692
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 193/415 (46%), Gaps = 37/415 (8%)
Query: 42 LNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK 97
L + F R I A ++ ++M + D +T+ ++ G ++ LF +P
Sbjct: 295 LGLCKFDR---INEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKP 351
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKFGRLCDAQRL 152
+V +N ++ G V + LD+A + M + +YN++I G+ K G + A +
Sbjct: 352 EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEV 411
Query: 153 FKEM---PC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMING 204
+M C PNV SYT+++DG+ K+ G I A + + M + N V + +I+
Sbjct: 412 LHDMRNKGCKPNVYSYTILVDGFCKL---GKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 205 LVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEA-WTLFQQIR---CRD 256
+ EA E+F MP+K +V ++I+G C+ ++ A W L I +
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
++N +I + + G +EA L ++MV G D++ + SL +D+ R +
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT-----SQPDIVSWNTIIAAFAQH 371
+++ G N L+ + G +V+ + F + S PDIV++N++I +
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSG-MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
+ F ++ A G+ PD +TF +L+S C+ G + ++ L + + D +P
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVP 702
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 165/374 (44%), Gaps = 38/374 (10%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTK-----DVVTWNSMLTAYWHSGFPQHSRALFDAMP 95
N I F G + A+ V M T DV T+NS++ YW G + + M
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 96 MK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLC 147
K NV S+ +V G + +DEA+N M + N +N +IS F K R+
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 148 DAQRLFKEMP---C-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWT 199
+A +F+EMP C P+V ++ +I G +V E I A L M N V++
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE---IKHALWLLRDMISEGVVANTVTYN 533
Query: 200 VMINGLVENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR 255
+IN + G +EA +L M + + ++I G C+ G+VD+A +LF+++ R
Sbjct: 534 TLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM-LR 592
Query: 256 D-----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQ 310
D S NI+I G ++G EEA+ +MV G PD + F SL ++
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 652
Query: 311 GRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIA 366
G + + G D N L++ K G + D+ L + + P+ +W+ ++
Sbjct: 653 GLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Query: 367 AFAQHVLYYKARSY 380
+ + R Y
Sbjct: 713 SIIPQETLDRRRFY 726
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 119/301 (39%), Gaps = 45/301 (14%)
Query: 197 SWTVMINGLVENGLYEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAWTLFQQI 252
S+ V++ LV ++ A +F M + + + ++ FC ++D A +L + +
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 253 RCRDIAS----WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALL 308
+ +I ++ R EAL L +M G PD F + +
Sbjct: 244 TKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 303
Query: 309 DQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAF 368
++ + ++ GF D L+ K G + ++ F + +P+IV +NT+I F
Sbjct: 304 NEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGF 363
Query: 369 AQHVLYYKARSYFDQMI-AVGVRPDGITFLSLL---------------------SVC--- 403
H A++ M+ + G+ PD T+ SL+ C
Sbjct: 364 VTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPN 423
Query: 404 -----------CRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C+ GKIDE+ N+ N M D G+ P + + CL+ + ++ A EI
Sbjct: 424 VYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPEAVEIF 482
Query: 453 R 453
R
Sbjct: 483 R 483
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/482 (22%), Positives = 213/482 (44%), Gaps = 67/482 (13%)
Query: 36 DVYRANLNIAAFSRAGNI----TAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
+VY N+ + A + G + T QV +K D+VT+N++++AY G + + L
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 92 DAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKF 143
+AMP K V ++N ++ G ++ + A FA M ++ +Y +++ K
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 144 GRLCDAQRLFKEMP----CPNVVSYTVMIDGYVK-------------VKEGG-------- 178
G + + +++F +M P++V ++ M+ + + VKE G
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 179 -----GIARARALFDAMPRRNE----------VSWTVMINGLVENGLYEEAWELFGRMPQ 223
G R + AM RNE V++ +++GL + + EA +LF M +
Sbjct: 414 TILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE 473
Query: 224 KNVVAS----TAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEE 275
+ + T +I G CK G + A LFQ+++ + D+ ++N ++ G+ + G +
Sbjct: 474 RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDT 533
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
A +++ MV + P + + L A S L + + + +I + + N+++
Sbjct: 534 AKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIK 593
Query: 336 MYSKCGSIVDS----ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV--GV 389
Y + G+ D E + PD +S+NT+I F + KA +M G+
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
PD T+ S+L CR ++ E+ + M+ + G+ P Y C+++ L A
Sbjct: 654 VPDVFTYNSILHGFCRQNQMKEAEVVLRKMI-ERGVNPDRSTYTCMINGFVSQDNLTEAF 712
Query: 450 EI 451
I
Sbjct: 713 RI 714
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 153/364 (42%), Gaps = 56/364 (15%)
Query: 127 ERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVS---------------------YT 165
+ + S +AMI ++ GRL DAQ M + VS +
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFD 169
Query: 166 VMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTV-------MINGLVENGLYEEAWELF 218
++I YV+ + + R +A +TV +I LV G E AW ++
Sbjct: 170 LLIRTYVQAR------KLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 219 GRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQN 270
+ + NV M+ CK GK+++ T Q++ + DI ++N +I+ Y+
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 271 GRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVN 330
G EEA L + M G P + ++ ++ ++ +A +++ G D +
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 331 NALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSYFDQMIA 386
+L+ K G +V++E F PD+V ++++++ F + KA YF+ +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 403
Query: 387 VGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQ 446
G+ PD + + L+ CR G I +MNL N M+ C +DV++ L
Sbjct: 404 AGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ----------GCAMDVVTYNTILH 453
Query: 447 RACE 450
C+
Sbjct: 454 GLCK 457
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 44 IAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK-- 97
++ F+R+GN+ A F+ + D V + ++ Y G + L + M +
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 98 --NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQR 151
+VV++N ++ G + ML EA F M ER ++ + +I G K G L +A
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 152 LFKEMPCP----NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EVSWTVMIN 203
LF++M +VV+Y ++DG+ KV G I A+ ++ M + +S+++++N
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKV---GDIDTAKEIWADMVSKEILPTPISYSILVN 558
Query: 204 GLVENGLYEEAWELFGRMPQKN----VVASTAMITGFCKQGKVDEAWTLFQQIRCR---- 255
L G EA+ ++ M KN V+ +MI G+C+ G + + +++
Sbjct: 559 ALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVP 618
Query: 256 -------------------------------------DIASWNIMITGYAQNGRGEEALN 278
D+ ++N ++ G+ + + +EA
Sbjct: 619 DCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEV 678
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+ +M+ G+ PD + + S L + + + +++ GF D
Sbjct: 679 VLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 197/450 (43%), Gaps = 60/450 (13%)
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPM-----KNVVSWNAMVAGCVQN 112
++FD++P +DV +WN+++++ G + LF M + + + +++ C +
Sbjct: 239 KLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDS 298
Query: 113 DMLDEAFNY------FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTV 166
+L M E + NA+I + KF + + L++ M + V++T
Sbjct: 299 SVLLRGRELHGRAIRIGLMQELSVN--NALIGFYSKFWDMKKVESLYEMMMAQDAVTFTE 356
Query: 167 MIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV 226
MI Y+ G + A +F + +N +++ ++ G NG +A +LF M Q+ V
Sbjct: 357 MITAYMSF---GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 227 VASTAMIT------GFCKQGKVDEAWTLF------------------QQIRCRDIASWNI 262
+ +T G + KV E F RC +A
Sbjct: 414 ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEE 473
Query: 263 M-----------------ITGYAQNGRGEEALNLFSQ-MVRTGMQPDDLIFVSLFTACAS 304
M I GYA+NG ++A++LF + + + D++ + C +
Sbjct: 474 MFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGT 533
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTI 364
L + G Q + +K G+ SD+S+ N+L++MY+KC D+ F + D++SWN++
Sbjct: 534 LGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSL 593
Query: 365 IAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVC--CRAGKIDESMNLFNLMVHD 422
I+ + +A + + +M ++PD IT ++S + K+ +LF M
Sbjct: 594 ISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTI 653
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEII 452
Y I P +EHY V V+ G L+ A + I
Sbjct: 654 YDIEPTTEHYTAFVRVLGHWGLLEEAEDTI 683
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 146/311 (46%), Gaps = 17/311 (5%)
Query: 122 FAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGY----VKVKEG 177
F + E NA+IS ++K G +A +F + P VVSYT +I G+ ++++
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMI 233
R R P NE ++ ++ V + ++ G + + +V S +++
Sbjct: 166 KVFFRMRKAGLVQP--NEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLM 223
Query: 234 TGFCKQ--GKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT-GMQP 290
+ + K D+ LF +I RD+ASWN +++ + G+ +A +LF +M R G
Sbjct: 224 SLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV 283
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF 350
D +L ++C ++L +GR+ + I+ G +LSVNNAL+ YSK + E +
Sbjct: 284 DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLY 343
Query: 351 GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID 410
D V++ +I A+ + A F + + IT+ +L++ CR G
Sbjct: 344 EMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANV----TEKNTITYNALMAGFCRNGHGL 399
Query: 411 ESMNLFNLMVH 421
+++ LF M+
Sbjct: 400 KALKLFTDMLQ 410
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 15/304 (4%)
Query: 116 DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEM---PCPNVVSYTVMIDGYV 172
D+ F +P+R+ AS+N ++S +K G+ A LF EM V S+T+
Sbjct: 235 DDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLST-LLS 293
Query: 173 KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWE------LFGRMPQKNV 226
+ + R R L R + + N L+ G Y + W+ L+ M ++
Sbjct: 294 SCTDSSVLLRGRELHGRAIRIGLMQELSVNNALI--GFYSKFWDMKKVESLYEMMMAQDA 351
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRT 286
V T MIT + G VD A +F + ++ ++N ++ G+ +NG G +AL LF+ M++
Sbjct: 352 VTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR 411
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
G++ D S AC ++ Q + IK G + + AL+ M ++C + D+
Sbjct: 412 GVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADA 471
Query: 347 ELAFGQ--TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV-GVRPDGITFLSLLSVC 403
E F Q ++ + +II +A++ L KA S F + + + D ++ +L+VC
Sbjct: 472 EEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Query: 404 CRAG 407
G
Sbjct: 532 GTLG 535
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 132/308 (42%), Gaps = 47/308 (15%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV 100
N I +S+ ++ +++ M +D VT+ M+TAY G + +F + KN +
Sbjct: 324 NALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTI 383
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPER-------------------NAASYNAMISGF- 140
++NA++AG +N +A F M +R + + I GF
Sbjct: 384 TYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFC 443
Query: 141 IKFG-------------------RLCDAQRLFKEMPC--PNVVSYTVMIDGYVK--VKEG 177
IKFG R+ DA+ +F + P + + T +I GY + + +
Sbjct: 444 IKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDK 503
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMI 233
R L + +EVS T+++ G E +++ + ++ ++I
Sbjct: 504 AVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLI 563
Query: 234 TGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
+ + K D+A +F +R D+ SWN +I+ Y G+EAL L+S+M ++PD +
Sbjct: 564 SMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDII 623
Query: 294 IFVSLFTA 301
+ +A
Sbjct: 624 TLTLVISA 631
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 183/428 (42%), Gaps = 63/428 (14%)
Query: 54 TAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAM 105
+ A + D+M + D+ T+ +++ G + +L M +VV + +
Sbjct: 202 SEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTI 261
Query: 106 VAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMP---- 157
+ +++A N F M + N +YN++I +GR DA RL +M
Sbjct: 262 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 321
Query: 158 CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEE 213
PNVV+++ +ID +VK G + A L+D M +R + +++ +ING + +E
Sbjct: 322 NPNVVTFSALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 378
Query: 214 AWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMIT 265
A +F M K NVV +I GFCK +V+E LF+++ R + ++N +I
Sbjct: 379 AKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
G Q G + A +F +MV G+ PD + + L L++ + + K +
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP 498
Query: 326 DLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMI 385
D+ N ++ K G + D W+ F +
Sbjct: 499 DIYTYNIMIEGMCKAGKVEDG--------------WD-----------------LFCSLS 527
Query: 386 AVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQL 445
GV+P+ I + +++S CR G +E+ LF M D G P S Y L+ R G
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKED-GTLPNSGTYNTLIRARLRDGDK 586
Query: 446 QRACEIIR 453
+ E+I+
Sbjct: 587 AASAELIK 594
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/452 (24%), Positives = 200/452 (44%), Gaps = 36/452 (7%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRA 89
SYD+Y N+ I F R + A V KM D+VT +S+L Y H + A
Sbjct: 112 SYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 171
Query: 90 LFDAMPM----KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFI 141
L D M + N V++N ++ G ++ EA M R +Y +++G
Sbjct: 172 LVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 231
Query: 142 KFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RR 193
K G + A L K+M +VV YT +ID K + A LF M R
Sbjct: 232 KRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYK---NVNDALNLFTEMDNKGIRP 288
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLF 249
N V++ +I L G + +A L M ++ NVV +A+I F K+GK+ EA L+
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 250 QQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
++ R DI +++ +I G+ + R +EA ++F M+ P+ + + +L
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSW 361
+++G + + + + G + N L+ + G ++ F + PDI+++
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
+ ++ ++ KA F+ + + PD T+ ++ C+AGK+++ +LF +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF-CSLS 527
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G+ P Y ++ R G + A + R
Sbjct: 528 LKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 182/383 (47%), Gaps = 28/383 (7%)
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFGRLCDAQ 150
P+ ++V +N +++ + + D + M + SYN +I+ F + +L A
Sbjct: 76 PLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135
Query: 151 RLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRRNEVSWTVMI 202
+ +M P++V+ + +++GY G I+ A AL D M + N V++ +I
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYC---HGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 203 NGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC---- 254
+GL + EA L RM Q ++ ++ G CK+G +D A +L +++
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 252
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
D+ + +I +ALNLF++M G++P+ + + SL + +
Sbjct: 253 ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ----TSQPDIVSWNTIIAAFAQ 370
+ +I+ + ++ +AL+ + K G +V++E + + + PDI +++++I F
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSE 430
H +A+ F+ MI+ P+ +T+ +L+ C+A +++E M LF M G+ +
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ-RGLVGNTV 431
Query: 431 HYACLVDVMSRAGQLQRACEIIR 453
Y L+ + +AG A +I +
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFK 454
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 156/314 (49%), Gaps = 12/314 (3%)
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMING 204
A +F+ + P + MI GYV V A ++ M +R + ++ ++
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVM---SFEEALCFYNEMMQRGNEPDNFTYPCLLKA 141
Query: 205 LVENGLYEEAWELFGRM----PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASW 260
E ++ G++ + +V ++I + + G+++ + +F+++ + ASW
Sbjct: 142 CTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASW 201
Query: 261 NIMITGYAQNGRGEEALNLFSQMV-RTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI 319
+ M++ A G E L LF M T ++ ++ VS ACA+ L+ G + ++
Sbjct: 202 SSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLL 261
Query: 320 KHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
++ + ++ V +LV MY KCG + + F + + + ++++ +I+ A H A
Sbjct: 262 RNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALR 321
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F +MI G+ PD + ++S+L+ C +G + E +F M+ + + P +EHY CLVD++
Sbjct: 322 MFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLL 381
Query: 440 SRAGQLQRACEIIR 453
RAG L+ A E I+
Sbjct: 382 GRAGLLEEALETIQ 395
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 117/264 (44%), Gaps = 26/264 (9%)
Query: 58 QVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMVAGCVQNDMLDE 117
QVF DV NS++ Y G + S A+F+ + K SW++MV+ M E
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSE 216
Query: 118 AFNYFAAM-PERN-AASYNAMIS--------GFIKFGRLCDAQRLFKEMPCPNVVSYTVM 167
F M E N A + M+S G + G + L + + N++ T +
Sbjct: 217 CLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG-MSIHGFLLRNISELNIIVQTSL 275
Query: 168 IDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNV- 226
+D YVK G + +A +F M +RN ++++ MI+GL +G E A +F +M ++ +
Sbjct: 276 VDMYVKC---GCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE 332
Query: 227 ---VASTAMITGFCKQGKVDEAWTLFQQI----RCRDIAS-WNIMITGYAQNGRGEEALN 278
V +++ G V E +F ++ + A + ++ + G EEAL
Sbjct: 333 PDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALE 392
Query: 279 LFSQMVRTGMQPDDLIFVSLFTAC 302
+ ++ +D+I+ + + C
Sbjct: 393 TIQSI---PIEKNDVIWRTFLSQC 413
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/415 (23%), Positives = 186/415 (44%), Gaps = 61/415 (14%)
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCDAQ 150
P+ ++ +N +++ + D + M N +YN +I+ F + ++ A
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 151 RLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMI 202
L +M P++V+ + +++GY G I+ A AL D M R + +++T +I
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYC---HGKRISDAVALVDQMVEMGYRPDTITFTTLI 122
Query: 203 NGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR--- 255
+GL + EA L RM Q+ N+V ++ G CK+G +D A+ L ++
Sbjct: 123 HGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 182
Query: 256 -DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
D+ +N +I + ++ALNLF +M G++P+ + + SL + S Q
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL----AFGQTSQPDIVSWNTIIAAFAQ 370
+ +I+ + +L NAL+ + K G V++E ++ PDI ++N++I F
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 371 HVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH--------- 421
H KA+ F+ M++ PD T+ +L+ C++ ++++ LF M H
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 422 -------------------------DYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
G+PP Y+ L+D + G+L++A E+
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 157/346 (45%), Gaps = 27/346 (7%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLF 153
+VV +N ++ + +D+A N F M + N +Y+++IS +GR DA +L
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 154 KEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
+M PN+V++ +ID +VK G A L D M +R + ++ +ING
Sbjct: 244 SDMIEKKINPNLVTFNALIDAFVK---EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 206 VENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
+ ++A ++F M K+ +I GFCK +V++ LF+++ R D
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++ +I G +G + A +F QMV G+ PD + + L + L++ + +
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQHVL 373
+ K D+ + ++ K G + D F S +P++V++NT+I+ L
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+A + +M G PD T+ +L+ R G S L M
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 115/489 (23%), Positives = 204/489 (41%), Gaps = 75/489 (15%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKM------PTKDVVTWNSMLTAYWHS------ 81
S+++Y N+ I F R I+ A + KM P+ +VT +S+L Y H
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPS--IVTLSSLLNGYCHGKRISDA 99
Query: 82 ------------------------GFPQHSRA-----LFDAMPMK----NVVSWNAMVAG 108
G H++A L D M + N+V++ +V G
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 159
Query: 109 CVQNDMLDEAFNYF----AAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PN 160
+ +D AFN AA E + +N +I K+ + DA LFKEM PN
Sbjct: 160 LCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPN 219
Query: 161 VVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWE 216
VV+Y+ +I G + A L M + N V++ +I+ V+ G + EA +
Sbjct: 220 VVTYSSLISCLCSY---GRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 217 LFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRD----IASWNIMITGYA 268
L M ++ ++ ++I GFC ++D+A +F+ + +D + ++N +I G+
Sbjct: 277 LHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFC 336
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
++ R E+ LF +M G+ D + + +L D ++ + ++ G D+
Sbjct: 337 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 396
Query: 329 VNNALVTMYSKCGSIVDSELAFG--QTSQP--DIVSWNTIIAAFAQHVLYYKARSYFDQM 384
+ L+ G + + F Q S+ DI + T+I + F +
Sbjct: 397 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 456
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
GV+P+ +T+ +++S C + E+ L M D G P S Y L+ R G
Sbjct: 457 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED-GPLPDSGTYNTLIRAHLRDGD 515
Query: 445 LQRACEIIR 453
+ E+IR
Sbjct: 516 KAASAELIR 524
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 189/425 (44%), Gaps = 65/425 (15%)
Query: 89 ALFDAM----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGF 140
LF M P+ ++V +N +++ + D + M +YN +I+ F
Sbjct: 71 GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 141 IKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----R 192
+ ++ A L +M P++V+ + +++GY G I+ A AL D M R
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC---HGKRISDAVALVDQMVEMGYR 187
Query: 193 RNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTL 248
+ +++T +I+GL + EA L RM Q+ N+V ++ G CK+G D A L
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 249 FQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
++ D+ +N +I + ++ALNLF +M G++P+ + + SL + S
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFG----QTSQPDIVS 360
Q + +I+ + +L NAL+ + K G V++E + ++ PDI +
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
+N+++ F H KA+ F+ M++ PD +T+ +L+ C++ ++++ LF M
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 421 H----------------------------------DYGIPPRSEHYACLVDVMSRAGQLQ 446
H G+PP Y+ L+D + G+L+
Sbjct: 428 HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLE 487
Query: 447 RACEI 451
+A E+
Sbjct: 488 KALEV 492
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 172/381 (45%), Gaps = 31/381 (8%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYF 122
++VT+ ++ G + L + M +VV +N ++ + +D+A N F
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 123 AAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKV 174
M + N +Y+++IS +GR DA +L +M PN+V++ +ID +VK
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK- 342
Query: 175 KEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKN----V 226
G A L+D M +R + ++ ++NG + ++A ++F M K+ V
Sbjct: 343 --EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDV 400
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQ 282
V +I GFCK +V++ LF+++ R D ++ +I G +G + A +F Q
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
MV G+ PD + + L + L++ + + + K D+ + ++ K G
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 343 IVDSELAFGQTS----QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
+ D F S +P++V++NT+I+ L +A + +M G P+ T+ +
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 399 LLSVCCRAGKIDESMNLFNLM 419
L+ R G S L M
Sbjct: 581 LIRAHLRDGDKAASAELIREM 601
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 192/451 (42%), Gaps = 36/451 (7%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRAL 90
+ +Y N+ I F R I+ A + KM +VT +S+L Y H + AL
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 91 FDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIK 142
D M + +++ ++ G ++ EA M +R N +Y +++G K
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 143 FGRLCDAQRLFKEMPCP----NVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRN 194
G A L +M +VV + +ID K + + A LF M R N
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRH---VDDALNLFKEMETKGIRPN 294
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQ 250
V+++ +I+ L G + +A +L M +K N+V A+I F K+GK EA L+
Sbjct: 295 VVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD 354
Query: 251 QIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
+ R DI ++N ++ G+ + R ++A +F MV PD + + +L
Sbjct: 355 DMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSK 414
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWN 362
++ G + + + G D L+ G +++ F Q PDI++++
Sbjct: 415 RVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYS 474
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
++ + KA FD M ++ D + +++ C+AGK+D+ +LF +
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF-CSLSL 533
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G+ P Y ++ + LQ A +++
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 175/345 (50%), Gaps = 24/345 (6%)
Query: 127 ERNAASYNAMISGFIKFGRLCDA----QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIAR 182
E + +++ +++GF GR+ +A R+ + P++V+ + +I+G G ++
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL---KGRVSE 193
Query: 183 ARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMIT 234
A L D M + +EV++ ++N L ++G A +LF +M ++N+ AS + +I
Sbjct: 194 ALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVID 253
Query: 235 GFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQP 290
CK G D+A +LF ++ + D+ +++ +I G +G+ ++ + +M+ + P
Sbjct: 254 SLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 291 DDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS---- 346
D + F +L L + ++ Y +I G D N+L+ + K + ++
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 347 ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRA 406
+L + +PDIV+++ +I ++ + F ++ + G+ P+ IT+ +L+ C++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 407 GKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
GK++ + LF MV G+PP Y L+D + G+L +A EI
Sbjct: 434 GKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNGELNKALEI 477
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/457 (23%), Positives = 201/457 (43%), Gaps = 70/457 (15%)
Query: 1 MLSSIIVSIALKPTP-------SSTARHTHFLLV--FAKHFS----SYDVYRANLNIAAF 47
+ S+I S L PTP S+ AR + LV F K +D+Y + I +
Sbjct: 57 LFESMIQSRPL-PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCY 115
Query: 48 SRAGNITAARQVFDKM----PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWN 103
R + A V + D +T+++++ + G + AL D M
Sbjct: 116 CRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM--------- 166
Query: 104 AMVAGCVQNDMLDEAFNYFAAMPER-NAASYNAMISGFIKFGRLCDAQRLFKEMP----C 158
M +R + + + +I+G GR+ +A L M
Sbjct: 167 -------------------VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQ 207
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EVSWTVMINGLVENGLYEEA 214
P+ V+Y +++ K G A A LF M RN V ++++I+ L ++G +++A
Sbjct: 208 PDEVTYGPVLNRLCK---SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 215 WELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITG 266
LF M K +VV +++I G C GK D+ + +++ R D+ +++ +I
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
+ + G+ EA L+++M+ G+ PD + + SL L + Q + L++ G + D
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 327 LSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSYFD 382
+ + L+ Y K + D F + S P+ +++NT++ F Q A+ F
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+M++ GV P +T+ LL C G++++++ +F M
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 187/392 (47%), Gaps = 32/392 (8%)
Query: 90 LFDAM----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFI 141
LF++M P+ + +N + + + D + M E + + MI+ +
Sbjct: 57 LFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYC 116
Query: 142 KFGRLCDA----QRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAM----PRR 193
+ +L A R +K P+ ++++ +++G+ G ++ A AL D M R
Sbjct: 117 RKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL---EGRVSEAVALVDRMVEMKQRP 173
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLF 249
+ V+ + +INGL G EA L RM Q + V ++ CK G A LF
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 250 QQIRCRDIAS----WNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+++ R+I + ++I+I ++G ++AL+LF++M G++ D + + SL +
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSW 361
D G + +I D+ +AL+ ++ K G +++++ + + PD +++
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
N++I F + ++A FD M++ G PD +T+ L++ C+A ++D+ M LF +
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFR-EIS 412
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
G+ P + Y LV ++G+L A E+ +
Sbjct: 413 SKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 149/306 (48%), Gaps = 27/306 (8%)
Query: 57 RQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSWNAMVAGCVQN 112
R++ + DVVT+++++ + G ++ L++ M + + +++N+++ G +
Sbjct: 304 REMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKE 363
Query: 113 DMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSY 164
+ L EA F M E + +Y+ +I+ + K R+ D RLF+E+ PN ++Y
Sbjct: 364 NCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITY 423
Query: 165 TVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGR 220
++ G+ + G + A+ LF M R + V++ ++++GL +NG +A E+F +
Sbjct: 424 NTLVLGFC---QSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 221 MPQKNVVASTAM----ITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGR 272
M + + + I G C KVD+AW+LF + + D+ ++N+MI G + G
Sbjct: 481 MQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGS 540
Query: 273 GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
EA LF +M G PDD + L A + L + + GF +D S
Sbjct: 541 LSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKM 600
Query: 333 LVTMYS 338
++ M S
Sbjct: 601 VIDMLS 606
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/393 (22%), Positives = 176/393 (44%), Gaps = 35/393 (8%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRALF 91
D+ + I G ++ A + D+M D VT+ +L SG + LF
Sbjct: 174 DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLF 233
Query: 92 DAMPMKN----VVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKF 143
M +N VV ++ ++ ++ D+A + F M + + +Y+++I G
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 144 GRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NE 195
G+ D ++ +EM P+VV+++ +ID +VK G + A+ L++ M R +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK---EGKLLEAKELYNEMITRGIAPDT 350
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQ 251
+++ +I+G + EA ++F M K ++V + +I +CK +VD+ LF++
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 252 IRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
I + + ++N ++ G+ Q+G+ A LF +MV G+ P + + L
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGE 470
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNT 363
L++ + + + K + + N ++ + D+ F S +PD+V++N
Sbjct: 471 LNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNV 530
Query: 364 IIAAFAQHVLYYKARSYFDQMIAVGVRPDGITF 396
+I + +A F +M G PD T+
Sbjct: 531 MIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 107/449 (23%), Positives = 194/449 (43%), Gaps = 72/449 (16%)
Query: 47 FSRAGNITAARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV-- 100
FS G + A + M T +T N +L G +++ +FD M ++ VV
Sbjct: 157 FSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPD 216
Query: 101 --SWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNA----MISGFIKFGRLCDAQRLFK 154
S+ MV GC ++ + EA + M +R NA +++ + G + A F+
Sbjct: 217 SSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 155 EMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLV 206
+M PN++++T +IDG K G I +A + + M R N + T +I+GL
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCK---KGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLC 333
Query: 207 ENGLYEEAWELFGRMPQK-----NVVASTAMITGFCKQGKVDEAWTLFQQIR-------- 253
+ G E+A+ LF ++ + NV T+MI G+CK+ K++ A LF +++
Sbjct: 334 KRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNV 393
Query: 254 ----------CR---------------------DIASWNIMITGYAQNGRGEEALNLFSQ 282
C+ +I ++N I + R EA L ++
Sbjct: 394 NTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNK 453
Query: 283 MVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGS 342
G++ D + + L ++Q + + K GF++D+ +NN L+ + +
Sbjct: 454 AFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKK 513
Query: 343 IVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLS 398
+ +SE F P ++ ++I+ + + A YF M G PD T+ S
Sbjct: 514 MKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGS 573
Query: 399 LLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
L+S C+ +DE+ L+ M+ D G+ P
Sbjct: 574 LISGLCKKSMVDEACKLYEAMI-DRGLSP 601
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 120/297 (40%), Gaps = 42/297 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKD-----VVTWNSMLTAYWHSGFPQHSRAL 90
+VY I + G A ++F K+ D V T+ SM+ Y + L
Sbjct: 321 NVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEML 380
Query: 91 FDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIK 142
F M + NV ++ ++ G + A+ M + N +YNA I K
Sbjct: 381 FSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK 440
Query: 143 FGRLCDAQRLF-KEMPC---PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSW 198
R +A L K C + V+YT++I K + I +A A F R N+ +
Sbjct: 441 KSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQND---INQALAFF---CRMNKTGF 494
Query: 199 -------TVMINGLVENGLYEEAWELF------GRMPQKNVVASTAMITGFCKQGKVDEA 245
++I +E+ LF G +P K T+MI+ +CK+G +D A
Sbjct: 495 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETY--TSMISCYCKEGDIDLA 552
Query: 246 WTLFQQIR----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
F ++ D ++ +I+G + +EA L+ M+ G+ P ++ V+L
Sbjct: 553 LKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 196/432 (45%), Gaps = 66/432 (15%)
Query: 47 FSRAGNITAARQVFDKM------PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK--- 97
F++ G ++ F M PT V T+N M+ G + +R LF+ M +
Sbjct: 237 FAKLGKTDDVKRFFKDMIGAGARPT--VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV 294
Query: 98 -NVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRL 152
+ V++N+M+ G + LD+ +F M E + +YNA+I+ F KFG+L
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEF 354
Query: 153 FKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVSWTVMING 204
++EM PNVVSY+ ++D + K G + +A + M R NE ++T +I+
Sbjct: 355 YREMKGNGLKPNVVSYSTLVDAFCK---EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDA 411
Query: 205 LVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----D 256
+ G +A+ L M Q NVV TA+I G C ++ EA LF ++ +
Sbjct: 412 NCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPN 471
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+AS+N +I G+ + + AL L +++ G++PD L++ + SL ++ +
Sbjct: 472 LASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMN 531
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
+ + G ++ + L+ Y K G+ + H+L
Sbjct: 532 EMKECGIKANSLIYTTLMDAYFKSGNPTE-----------------------GLHLL--- 565
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
D+M + + +TF L+ C+ + ++++ FN + +D+G+ + + ++
Sbjct: 566 -----DEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 437 DVMSRAGQLQRA 448
D + + Q++ A
Sbjct: 621 DGLCKDNQVEAA 632
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 168/367 (45%), Gaps = 28/367 (7%)
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCDAQRLFKEM- 156
++A+ + + ML+EA F+ M S N ++ F K G+ D +R FK+M
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 157 ---PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENG 209
P V +Y +MID K G + AR LF+ M R + V++ MI+G + G
Sbjct: 255 GAGARPTVFTYNIMIDCMCK---EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVG 311
Query: 210 LYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWN 261
++ F M + +V+ A+I FCK GK+ +++++ ++ S++
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
++ + + G ++A+ + M R G+ P++ + SL A + L + +++
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKA 377
G + ++ AL+ + ++E FG+ P++ S+N +I F + +A
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+++ G++PD + + + + C KI+ + + N M + GI S Y L+D
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-KECGIKANSLIYTTLMD 550
Query: 438 VMSRAGQ 444
++G
Sbjct: 551 AYFKSGN 557
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 149/346 (43%), Gaps = 56/346 (16%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLF 153
NVV++ A++ G + + EA F M N ASYNA+I GF+K + A L
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 154 KEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGL 205
E+ P+++ Y I G +++ I A+ + + M + N + +T +++
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEK---IEAAKVVMNEMKECGIKANSLIYTTLMDAY 552
Query: 206 VENGLYEEAWELFGRMPQKN----VVASTAMITGFCKQGKVDEAWTLFQQIRCR-----D 256
++G E L M + + VV +I G CK V +A F +I +
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
A + MI G ++ + E A LF QMV+ G+ PD + SL
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM----------------- 655
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYK 376
D + N L + ++ D G + D++++ +++ + K
Sbjct: 656 -------DGNFKQGNVLEAL-----ALRDKMAEIGM--KLDLLAYTSLVWGLSHCNQLQK 701
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN-LMVH 421
ARS+ ++MI G+ PD + +S+L G IDE++ L + LM H
Sbjct: 702 ARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKH 747
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 121/260 (46%), Gaps = 15/260 (5%)
Query: 205 LVENGLYEEAWELFGRMPQKNVVASTAMITG----FCKQGKVDEAWTLFQQIRCR----D 256
L++ G+ EEA + F +M + V T G F K GK D+ F+ +
Sbjct: 202 LIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPT 261
Query: 257 IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYA 316
+ ++NIMI + G E A LF +M G+ PD + + S+ + LD +
Sbjct: 262 VFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFE 321
Query: 317 LVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF-----GQTSQPDIVSWNTIIAAFAQH 371
+ + D+ NAL+ + K G + L F G +P++VS++T++ AF +
Sbjct: 322 EMKDMCCEPDVITYNALINCFCKFGKLPIG-LEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEH 431
+ +A ++ M VG+ P+ T+ SL+ C+ G + ++ L N M+ G+
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ-VGVEWNVVT 439
Query: 432 YACLVDVMSRAGQLQRACEI 451
Y L+D + A +++ A E+
Sbjct: 440 YTALIDGLCDAERMKEAEEL 459
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 160/343 (46%), Gaps = 27/343 (7%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLF 153
N ++++ ++ G + EA M E + + N +++G G+ +A L
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 154 KEM---PC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EVSWTVMINGL 205
+M C PN V+Y +++ K G A A L M RN V ++++I+GL
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCK---SGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
++G + A+ LF M K N++ +I GFC G+ D+ L + + R ++
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+++++I + + G+ EA L +M+ G+ PD + + SL LD+ Q L
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVL 373
++ G D ++ N L+ Y K I D F + S D V++NT+I F +
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
A+ F +M++ V P+ +T+ LL C G+ ++++ +F
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIF 496
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 155/342 (45%), Gaps = 52/342 (15%)
Query: 34 SYDVYRANLNIAAFSRAG----NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
+ ++ N+ I F AG R + + +VVT++ ++ ++ G + +
Sbjct: 295 TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE 354
Query: 90 LFDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFI 141
L M + + +++ +++ G + + LD+A M + N ++N +I+G+
Sbjct: 355 LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYC 414
Query: 142 KFGRLCDAQRLFKEMPCPNVV----SYTVMIDGYVKVKEGGGIARARALFDAMPRR---- 193
K R+ D LF++M VV +Y +I G+ ++ G + A+ LF M R
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL---GKLNVAKELFQEMVSRKVPP 471
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM----ITGFCKQGKVDEAWTLF 249
N V++ ++++GL +NG E+A E+F ++ + + + I G C KVD+AW LF
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 250 QQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+ + + ++NIMI G + G EA LF +M G PD
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG------------- 578
Query: 306 ALLDQGRQTYALVIK-HGFDSDLSVNNALVTMYSKCGSIVDS 346
TY ++I+ H D D + + L+ +CG VD+
Sbjct: 579 -------WTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDA 613
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 177/421 (42%), Gaps = 59/421 (14%)
Query: 57 RQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQN 112
R + P V+ ++ + +A + AL M +K N+ + + M+ +
Sbjct: 77 RDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRC 136
Query: 113 DMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSY 164
L AF+ + E N +++ +I+G GR+ +A L M P++++
Sbjct: 137 RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITI 196
Query: 165 TVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWELFGR 220
+++G G A A L D M + N V++ ++N + ++G A EL +
Sbjct: 197 NTLVNGLCL---SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 221 MPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGR 272
M ++N+ V + +I G CK G +D A+ LF ++ + +I ++NI+I G+ GR
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 273 GEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
++ L M++ + P+ + F L + L + + + +I G
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGI--------- 364
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
PD +++ ++I F + KA D M++ G P+
Sbjct: 365 ----------------------APDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
TF L++ C+A +ID+ + LF M G+ + Y L+ G+L A E+
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSL-RGVVADTVTYNTLIQGFCELGKLNVAKELF 461
Query: 453 R 453
+
Sbjct: 462 Q 462
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 93/186 (50%), Gaps = 5/186 (2%)
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
+ ++A++LF M+ + P + F LF+A A D + G +L +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 332 ALVTMYSKCGSIVDSELAFGQT----SQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
++ + +C + + A G+ +P+ ++++T+I +A D+M+ +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQR 447
G +PD IT +L++ C +GK E+M L + MV +YG P + Y +++VM ++GQ
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 448 ACEIIR 453
A E++R
Sbjct: 247 AMELLR 252
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 201/453 (44%), Gaps = 37/453 (8%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFPQHSRA 89
S+++Y ++ I F R ++ A + KM +VT NS+L + H + A
Sbjct: 107 SHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 166
Query: 90 LFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFI 141
L D M + V++ +V G Q++ EA M + + +Y A+I+G
Sbjct: 167 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 226
Query: 142 KFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR---- 193
K G A L +M +VV Y +IDG K K + A LF+ M +
Sbjct: 227 KRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH---MDDAFDLFNKMETKGIKP 283
Query: 194 NEVSWTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLF 249
+ ++ +I+ L G + +A L M +KN+ V A+I F K+GK+ EA L+
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 250 QQI----RC-RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACAS 304
++ C D+ ++N +I G+ + R EE + +F +M + G+ + + + +L
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 305 LALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAF----GQTSQPDIVS 360
D + + ++ G D+ N L+ G++ + + F + + DIV+
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 361 WNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMV 420
+ T+I A + F + GV+P+ +T+ +++S CR G +E+ LF M
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 421 HDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
D G P S Y L+ R G + E+I+
Sbjct: 524 ED-GPLPNSGTYNTLIRARLRDGDEAASAELIK 555
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 170/375 (45%), Gaps = 33/375 (8%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAMVAGCVQNDMLDEAFNYF 122
D+VT+ +++ G P + L + M +VV +N ++ G + +D+AF+ F
Sbjct: 214 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLF 273
Query: 123 AAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMIDGYVKV 174
M + + +YN +IS +GR DA RL +M P++V + +ID +VK
Sbjct: 274 NKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVK- 332
Query: 175 KEGGGIARARALFDAMPRRNE-----VSWTVMINGLVENGLYEEAWELFGRMPQK----N 225
G + A L+D M + V++ +I G + EE E+F M Q+ N
Sbjct: 333 --EGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFS 281
V T +I GF + D A +F+Q+ DI ++NI++ G NG E AL +F
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
M + M+ D + + ++ A ++ G + + G ++ +++ + + G
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 342 SIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+++ F + + P+ ++NT+I A + + +M + G D TF
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF- 569
Query: 398 SLLSVCCRAGKIDES 412
L++ G++D+S
Sbjct: 570 GLVTNMLHDGRLDKS 584
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 178/379 (46%), Gaps = 29/379 (7%)
Query: 95 PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPE----RNAASYNAMISGFIKFGRLCDAQ 150
P ++V ++ +++ + + D + M N +Y+ I+ F + +L A
Sbjct: 71 PFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 151 RLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMI 202
+ +M P++V+ +++G+ G I+ A AL D M + + V++T ++
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFC---HGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 203 NGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRC---- 254
+GL ++ EA L RM Q ++V A+I G CK+G+ D A L ++
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 255 RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQT 314
D+ +N +I G + ++A +LF++M G++PD + L + + +
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 315 YALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ-----PDIVSWNTIIAAFA 369
+ +++ + DL NAL+ + K G +V++E + + + PD+V++NT+I F
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 370 QHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRS 429
++ + F +M G+ + +T+ +L+ +A D + +F MV D G+ P
Sbjct: 368 KYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD-GVHPDI 426
Query: 430 EHYACLVDVMSRAGQLQRA 448
Y L+D + G ++ A
Sbjct: 427 MTYNILLDGLCNNGNVETA 445
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 139/326 (42%), Gaps = 17/326 (5%)
Query: 145 RLCDAQRLFKEM----PCPNVVSYTVMIDGYVKV-KEGGGIARARALFDAMPRRNEVSWT 199
+L DA LF +M P P++V ++ ++ K+ K I+ + + N +++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 200 VMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQI--- 252
+ IN A + G+M + ++V +++ GFC ++ EA L Q+
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 253 -RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
D ++ ++ G Q+ + EA+ L +MV G QPD + + ++ D
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAA 367
+ K ++D+ + N ++ K + D+ F + +PD+ ++N +I+
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
+ + A M+ + PD + F +L+ + GK+ E+ L++ MV P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354
Query: 428 RSEHYACLVDVMSRAGQLQRACEIIR 453
Y L+ + +++ E+ R
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFR 380
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 186/416 (44%), Gaps = 33/416 (7%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV----SWNAMVAGCVQNDMLDEAFNYF 122
DV T+N ++ A + + + + + MP +V ++ ++ G ++ LD A
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 123 AAMPERNAA----SYNAMISGFIKFGRLCDAQRLFKEMPC-----PNVVSYTVMIDGYVK 173
M E + S N ++ GF K GR+ DA +EM P+ ++ +++G K
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 174 VKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQK----N 225
G + A + D M + + ++ +I+GL + G +EA E+ +M + N
Sbjct: 308 ---AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFS 281
V +I+ CK+ +V+EA L + + + D+ ++N +I G A+ LF
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+M G +PD+ + L + S LD+ + G + N L+ + K
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 342 SIVDSELAFGQTSQPDI----VSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
++E F + + V++NT+I + A DQMI G +PD T+
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
SLL+ CR G I ++ ++ M + G P Y L+ + +AG+++ A +++R
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLR 599
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 188/465 (40%), Gaps = 71/465 (15%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVV----TWNSMLTAYWHSGFPQHSRALF 91
DV N+ I A RA + A + + MP+ +V T+ +++ Y G + +
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247
Query: 92 DAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNA-----ASYNAMISGFIK 142
+ M VS N +V G + +++A N+ M ++ ++N +++G K
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 143 FGRLCDAQR----LFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----N 194
G + A + +E P+V +Y +I G K+ G + A + D M R N
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL---GEVKEAVEVLDQMITRDCSPN 364
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQ 250
V++ +I+ L + EEA EL + K ++ ++I G C A LF+
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 251 QIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
++R + D ++N++I G+ +EALN+ QM +G + + +L
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT----SQPDIVSWN 362
+ + + + HG + N L+ K + D+ Q +PD ++N
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKID------------ 410
+++ F + KA M + G PD +T+ +L+S C+AG+++
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 411 -----------------------ESMNLFNLMVHDYGIPPRSEHY 432
E++NLF M+ PP + Y
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 142/310 (45%), Gaps = 21/310 (6%)
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR----RNEVSWTVMINGLVENGLYEEA 214
P+V ++ V+I + + + A + + MP +E ++T ++ G +E G + A
Sbjct: 187 PDVSTFNVLIKALCRAHQ---LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 215 WELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQIRCRD-----IASWNIMIT 265
+ +M + V+ ++ GFCK+G+V++A Q++ +D ++N ++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
G + G + A+ + M++ G PD + S+ + L + + + +I
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363
Query: 326 DLSVNNALVTMYSKCGSIVD-SELAFGQTSQ---PDIVSWNTIIAAFAQHVLYYKARSYF 381
+ N L++ K + + +ELA TS+ PD+ ++N++I + A F
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSR 441
++M + G PD T+ L+ C GK+DE++N+ M G Y L+D +
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCK 482
Query: 442 AGQLQRACEI 451
A + + A EI
Sbjct: 483 ANKTREAEEI 492
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 9/232 (3%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQI-RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGM 288
T+++ + G VD A +F + ++I W MI+ Y +N EA+ LF +M +
Sbjct: 104 TSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKI 163
Query: 289 QPDDLIFVSLFTACASLALLDQGRQTYALVIKHG--FDSDLSVNNALVTMYSKCGSIVDS 346
+ D +I +ACA L + G + Y+ IK DL++ N+L+ MY K G +
Sbjct: 164 ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKA 223
Query: 347 ELAFGQTSQPDIVSWNTIIAAFA------QHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
F ++ + D+ ++ ++I +A + + +K DQ + P+ +TF+ +L
Sbjct: 224 RKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
C +G ++E F M+ DY + PR H+ C+VD+ R+G L+ A E I
Sbjct: 284 MACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFI 335
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 134/311 (43%), Gaps = 59/311 (18%)
Query: 68 VVTWNSMLTAYWHS-GFPQHSRALFDAMPMK-NVVSWNAMVAGCVQNDMLDEAFNYFAAM 125
V+ + L ++ S G ++R +FD P K N+V W AM++ +N+ EA F M
Sbjct: 99 VIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRM 158
Query: 126 PERNAASYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARA 185
+++ + C ++ + + + Y + I R R
Sbjct: 159 EAEKIELDGVIVTVALS--------------ACADLGAVQMGEEIYSR-----SIKRKRR 199
Query: 186 LFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEA 245
L + RN ++N V++G E+A +LF +K+V T+MI G+ G+ E+
Sbjct: 200 LAMDLTLRNS-----LLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQES 254
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
LF++++ D S + +IT P+D+ F+ + AC+
Sbjct: 255 LELFKKMKTID-QSQDTVIT------------------------PNDVTFIGVLMACSHS 289
Query: 306 ALLDQGRQTYALVIKHGFDSDLSVNNA----LVTMYSKCGSIVDSELAFGQTS-QPDIVS 360
L+++G++ + +I D +L A +V ++ + G + D+ Q +P+ V
Sbjct: 290 GLVEEGKRHFKSMI---MDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNTVI 346
Query: 361 WNTIIAAFAQH 371
W T++ A + H
Sbjct: 347 WRTLLGACSLH 357
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 37/264 (14%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK-DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSW 102
+ +S G++ ARQVFD+ P K ++V W +M++AY + + LF M + +
Sbjct: 107 VGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELD 166
Query: 103 NAMVA---------GCVQNDMLDEAFNYFAAMPERNAASY---NAMISGFIKFGRLCDAQ 150
+V G VQ M +E ++ R A N++++ ++K G A+
Sbjct: 167 GVIVTVALSACADLGAVQ--MGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 151 RLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALF----------DAMPRRNEVSWTV 200
+LF E +V +YT MI GY G + LF D + N+V++
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYAL---NGQAQESLELFKKMKTIDQSQDTVITPNDVTFIG 281
Query: 201 MINGLVENGLYEEAWELFGRMPQK-NVVASTA----MITGFCKQGKVDEAWTLFQQIRCR 255
++ +GL EE F M N+ A M+ FC+ G + +A Q+ +
Sbjct: 282 VLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIK 341
Query: 256 -DIASWNIMITGYAQNGR---GEE 275
+ W ++ + +G GEE
Sbjct: 342 PNTVIWRTLLGACSLHGNVELGEE 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 100/227 (44%), Gaps = 31/227 (13%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF---- 91
D+ N + + ++G AR++FD+ KDV T+ SM+ Y +G Q S LF
Sbjct: 203 DLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMK 262
Query: 92 ------DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP-----ERNAASYNAMISGF 140
D + N V++ ++ C + +++E +F +M + A + M+ F
Sbjct: 263 TIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLF 322
Query: 141 IKFGRLCDAQRLFKEMPC-PNVVSYTVM-----IDGYVKVKEGGGIARARALFDAMPRRN 194
+ G L DA +MP PN V + + + G V++ G R +F+ + R +
Sbjct: 323 CRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVEL----GEEVQRRIFE-LDRDH 377
Query: 195 EVSWTVMINGLVENGLYEEAWELFG-----RMPQKNVVASTAMITGF 236
+ + N G+++E ++ RMP K+ + ++I F
Sbjct: 378 VGDYVALSNIYASKGMWDEKSKMRDRVRKRRMPGKSWIELGSIINEF 424
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
Query: 261 NIMITGYAQNGRGEEALNLFSQMVRTGMQPDD---LIFVSLFTACASLALLDQGRQTYAL 317
N + Y ++G +AL F R D ++F ++ + LD GRQ +AL
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD-GRQIHAL 90
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT-SQPDIVSWNTIIAAFAQHVLYYK 376
V K GF++ + + +LV YS G + + F +T + +IV W +I+A+ ++ +
Sbjct: 91 VRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVE 150
Query: 377 ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
A F +M A + DG+ LS C G +
Sbjct: 151 AIELFKRMEAEKIELDGVIVTVALSACADLGAV 183
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 115/536 (21%), Positives = 220/536 (41%), Gaps = 130/536 (24%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSG-------------- 82
VY N I ++GN+ +A + FD+M +DVVT+N +++ G
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 83 ---------FPQHSRALFDAMPMK----------------NVVSWNAMVA--GCVQNDML 115
FP D + + N+ +A+V C++ ++
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLR--LV 163
Query: 116 DEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFK-------EMPCPNVVSYTVMI 168
D A F M +RN A N ++ F + G +++RLF+ E N ++Y MI
Sbjct: 164 DVALKLFDEMLDRNLAVCNLLLRCFCQTG---ESKRLFEVYLRMELEGVAKNGLTYCYMI 220
Query: 169 DG--------------YVKVKEG-------------------GGIARARALFDAMPRRNE 195
G + VK G G ++ + F+A+P ++
Sbjct: 221 RGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDV 280
Query: 196 VSWTVMINGLVENGLYEEAWELFGRM------PQ-------------------------- 223
+SW +++ + G ++ +LF +M P
Sbjct: 281 ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCY 340
Query: 224 --------KNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEE 275
++ +A+I + K ++ + L+Q + C ++ N ++T G ++
Sbjct: 341 VLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKD 400
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLAL---LDQGRQTYALVIKHGFDSDLSVNNA 332
+ +F M+ G D++ ++ A SL+L L + IK G+ +D++V+ +
Sbjct: 401 IIEMFGLMIDEGTGIDEVTLSTVLKA-LSLSLPESLHSCTLVHCCAIKSGYAADVAVSCS 459
Query: 333 LVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
L+ Y+K G S F + P+I +II +A++ + +M + + PD
Sbjct: 460 LIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPD 519
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+T LS+LS C +G ++E +F+ + YGI P + YAC+VD++ RAG +++A
Sbjct: 520 EVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKA 575
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 143/301 (47%), Gaps = 16/301 (5%)
Query: 122 FAAMPERNAA----SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
F++ E N + ++N I IK G L A F EM +VV+Y ++I G +
Sbjct: 34 FSSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRY--- 90
Query: 178 GGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVAS 229
G RA L+ M R + ++ +++ + E ++ R+ N+
Sbjct: 91 GCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVR 150
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
+A++ + VD A LF ++ R++A N+++ + Q G + ++ +M G+
Sbjct: 151 SALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVA 210
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD-SDLSVNNALVTMYSKCGSIVDSEL 348
+ L + + C+ L+ +G+Q ++LV+K G++ S++ V N LV YS CG + S
Sbjct: 211 KNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMR 270
Query: 349 AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGK 408
+F + D++SWN+I++ A + + F +M G RP F+S L+ C R
Sbjct: 271 SFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSD 330
Query: 409 I 409
I
Sbjct: 331 I 331
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 2/200 (1%)
Query: 222 PQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFS 281
P V I K G + A F ++ RD+ ++N++I+G ++ G A+ L++
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYA 101
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+MV G++ F S+ + C+ +G Q + VI GF ++ V +ALV +Y+ C
Sbjct: 102 EMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CL 160
Query: 342 SIVDSELA-FGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
+VD L F + ++ N ++ F Q + + +M GV +G+T+ ++
Sbjct: 161 RLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMI 220
Query: 401 SVCCRAGKIDESMNLFNLMV 420
C + E L +L+V
Sbjct: 221 RGCSHDRLVYEGKQLHSLVV 240
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 151/322 (46%), Gaps = 27/322 (8%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLF 153
NVV ++ ++ + D+A N F M + N +Y+++IS + R DA RL
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLL 318
Query: 154 KEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
+M PNVV++ +ID +VK G + A L+D M +R + +++ +ING
Sbjct: 319 SDMIERKINPNVVTFNALIDAFVK---EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
+ +EA +F M K NVV +I GFCK ++DE LF+++ R +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++ +I G+ Q + A +F QMV G+ P+ + + +L L++ +
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQHVL 373
+ + + + N ++ K G + D F S +PD++ +NT+I+ F + L
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 374 YYKARSYFDQMIAVGVRPDGIT 395
+A + F +M G PD T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 200/440 (45%), Gaps = 65/440 (14%)
Query: 71 WNSMLTAYWHSGFPQHSRALFDAM----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP 126
+ +L HS + LF M P+ ++ +N +++ + D + M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 127 E----RNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGG 178
N +YN +I+ F + ++ A L +M P++V+ + +++GY G
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC---HGK 169
Query: 179 GIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVAST 230
I+ A AL D M R + +++T +I+GL + EA L RM Q+ N+V
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 229
Query: 231 AMITGFCKQGKVDEAWTLFQQIRCRDIAS----WNIMITGYAQNGRGEEALNLFSQMVRT 286
++ G CK+G +D A+ L ++ I + ++ +I + ++ALNLF++M
Sbjct: 230 VVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 287 GMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS 346
G++P+ + + SL + + + + +I+ + ++ NAL+ + K G +V++
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 347 ELAFGQ----TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSV 402
E + + + PDI +++++I F H +A+ F+ MI+ P+ +T+ +L++
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 403 CCRAGKIDESMNLFNLM---------------VHDY-------------------GIPPR 428
C+A +IDE + LF M +H + G+ P
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 429 SEHYACLVDVMSRAGQLQRA 448
Y L+D + + G+L++A
Sbjct: 470 IMTYNTLLDGLCKNGKLEKA 489
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 195/459 (42%), Gaps = 68/459 (14%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHS-------- 81
S+++Y N+ I F R I+ A + KM +VT +S+L Y H
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 82 ----------------------GFPQHSRA-----LFDAMPMK----NVVSWNAMVAGCV 110
G H++A L D M + N+V++ +V G
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 111 QNDMLDEAFNYF----AAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMPC----PNVV 162
+ +D AFN AA E N Y+ +I K+ DA LF EM PNV+
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 296
Query: 163 SYTVMIDGYVKVKEGGGIARARALFDAMPRR---NEVSWTVMINGLVENGLYEEAWELFG 219
+Y+ +I + +R L D + R+ N V++ +I+ V+ G EA +L+
Sbjct: 297 TYSSLISCLCNYERWSDASRL--LSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354
Query: 220 RMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRD----IASWNIMITGYAQNG 271
M ++ ++ +++I GFC ++DEA +F+ + +D + ++N +I G+ +
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
R +E + LF +M + G+ + + + +L D + + ++ G ++ N
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474
Query: 332 ALVTMYSKCGSIVDSELAFG----QTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAV 387
L+ K G + + + F +P I ++N +I + F +
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 534
Query: 388 GVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIP 426
GV+PD I + +++S CR G +E+ LF M D +P
Sbjct: 535 GVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 135/264 (51%), Gaps = 30/264 (11%)
Query: 55 AARQVFDKMPTK---DVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVA 107
A+R + D + K +VVT+N+++ A+ G + L+D M + ++ ++++++
Sbjct: 314 ASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 373
Query: 108 GCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMP----CP 159
G +D LDEA + F M + N +YN +I+GF K R+ + LF+EM
Sbjct: 374 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVG 433
Query: 160 NVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAW 215
N V+YT +I G+ + ++ A+ +F M N +++ +++GL +NG E+A
Sbjct: 434 NTVTYTTLIHGFFQARD---CDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 216 ELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGY 267
+F + + + MI G CK GKV++ W LF + + D+ +N MI+G+
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Query: 268 AQNGRGEEALNLFSQMVRTGMQPD 291
+ G EEA LF +M G PD
Sbjct: 551 CRKGLKEEADALFRKMREDGPLPD 574
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 207/451 (45%), Gaps = 69/451 (15%)
Query: 37 VYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSG--FPQHSRAL 90
VY + I+A+ R+G A VF+ M ++VT+N+++ A G F Q ++
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK-F 326
Query: 91 FDAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIK 142
FD M V +++N+++A C + + + A N F M E++ SYN ++ K
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICK 386
Query: 143 FGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRN 194
G++ A + +MP PNVVSY+ +IDG+ K G A LF M +
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKA---GRFDEALNLFGEMRYLGIALD 443
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWTLFQ 250
VS+ +++ + G EEA ++ M +K+VV A++ G+ KQGK DE +F
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 251 QIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
+++ ++ +++ +I GY++ G +EA+ +F + G++ D +++ +L A
Sbjct: 504 EMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALV-------TM-----YSKCGSIVDSELAFGQTS 354
L+ + K G ++ N+++ TM YS GS+ S A +
Sbjct: 564 LVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 623
Query: 355 QPDIVSWNTIIAAFAQHVLYYKARS----------------YFDQMIAVGVRPDGITFLS 398
+ + N +I F Q R+ F +M + ++P+ +TF +
Sbjct: 624 ETE---GNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSA 680
Query: 399 LLSVCCRAGKI-DESMNLFNLMVHD---YGI 425
+L+ C R D SM L L + D YG+
Sbjct: 681 ILNACSRCNSFEDASMLLEELRLFDNKVYGV 711
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 166/341 (48%), Gaps = 27/341 (7%)
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGI--ARARA 185
+++A+IS + + G +A +F M PN+V+Y +ID K GG+ +
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK----GGMEFKQVAK 325
Query: 186 LFDAMPRRNEVSWTVMINGLV----ENGLYEEAWELFGRMP----QKNVVASTAMITGFC 237
FD M R + N L+ GL+E A LF M +++V + ++ C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 238 KQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDL 293
K G++D A+ + Q+ + ++ S++ +I G+A+ GR +EALNLF +M G+ D +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 294 IFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT 353
+ +L + + ++ + G D+ NAL+ Y K G + + F +
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 354 SQ----PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKI 409
+ P++++++T+I +++ LY +A F + + G+R D + + +L+ C+ G +
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 410 DESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACE 450
+++L + M + GI P Y ++D R+ + R+ +
Sbjct: 566 GSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCG------SIVDSELAFGQTSQPDIVSWNTII 365
++ + G+ + + +AL++ Y + G S+ +S +G +P++V++N +I
Sbjct: 253 KRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGL--RPNLVTYNAVI 310
Query: 366 AAFAQHVLYYK-ARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
A + + +K +FD+M GV+PD ITF SLL+VC R G + + NLF+ M +
Sbjct: 311 DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRR- 369
Query: 425 IPPRSEHYACLVDVMSRAGQLQRACEII 452
I Y L+D + + GQ+ A EI+
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEIL 397
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 195/447 (43%), Gaps = 37/447 (8%)
Query: 38 YRANLNIAAFSRAGNITAARQVFDKMPTKDVV----TWNSMLTAYWHSGFPQHSRALFDA 93
Y + I S+ G + A+ +FD M ++ + S++ Y + L
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 94 MPMKNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGR 145
M +N+V ++ +V G + LD A+N M N Y +I F++ R
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR 467
Query: 146 LCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVS 197
DA R+ KEM P++ Y +I G K K + AR+ M + N +
Sbjct: 468 FGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR---MDEARSFLVEMVENGLKPNAFT 524
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQQIR 253
+ I+G +E + A + M + N V T +I +CK+GKV EA + ++ +
Sbjct: 525 YGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 254 CR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
+ D ++ +++ G +N + ++A +F +M G+ PD + L + L +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQ 644
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTII 365
+ + +++ G ++ + N L+ + + G I ++ + S P+ V++ TII
Sbjct: 645 KASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTII 704
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
+ + +A FD+M G+ PD + +L+ CCR ++ ++ +F + G
Sbjct: 705 DGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG--TNKKGC 762
Query: 426 PPRSEHYACLVDVMSRAGQLQRACEII 452
+ + L++ + + G+ + E++
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVL 789
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 107/480 (22%), Positives = 205/480 (42%), Gaps = 76/480 (15%)
Query: 44 IAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYW-HSGFPQHSRALFDAMPM-- 96
+ +G++ A + +M +VV + +++ + +S F R L +
Sbjct: 424 VKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGI 483
Query: 97 -KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQR 151
++ +N+++ G + +DEA ++ M E NA +Y A ISG+I+ A +
Sbjct: 484 APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADK 543
Query: 152 LFKEM-PC---PNVVSYTVMIDGYVKVKEGGGIARA----RALFDAMPRRNEVSWTVMIN 203
KEM C PN V T +I+ Y K G + A R++ D + ++TV++N
Sbjct: 544 YVKEMRECGVLPNKVLCTGLINEYCK---KGKVIEACSAYRSMVDQGILGDAKTYTVLMN 600
Query: 204 GLVENGLYEEAWELFGRMPQK--------------------------------------- 224
GL +N ++A E+F M K
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI----ASWNIMITGYAQNGRGEEALNLF 280
NV+ ++ GFC+ G++++A L ++ + + ++ +I GY ++G EA LF
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC 340
+M G+ PD ++ +L C L +++ + K G S + NAL+ K
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKF 779
Query: 341 GSI-VDSEL-------AFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
G + +E+ +F + +P+ V++N +I + A+ F QM + P
Sbjct: 780 GKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT 839
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
IT+ SLL+ + G+ E +F+ + GI P Y+ +++ + G +A ++
Sbjct: 840 VITYTSLLNGYDKMGRRAEMFPVFDEAIA-AGIEPDHIMYSVIINAFLKEGMTTKALVLV 898
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 191/443 (43%), Gaps = 38/443 (8%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDAM 94
+DV ++ I A RAGN+ + V K T TA + + L ++M
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFK-------TEKEFRTATLNV---DGALKLKESM 268
Query: 95 PMKNVV----SWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFGRL 146
K +V +++ ++ G + L++A + M + +Y+ +I G +K GR
Sbjct: 269 ICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK-GRN 327
Query: 147 CDAQR-LFKEMPCPNVVSYTVMIDGYVKVKEGGGI-ARARALFDAMPRRNEV----SWTV 200
DA + L EM + M D + V G+ +A+ALFD M + ++
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 201 MINGLVENGLYEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAWTLFQQI---R 253
+I G + +EL M ++N+V S ++ G C G +D A+ + +++
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 254 CR-DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
CR ++ + +I + QN R +A+ + +M G+ PD + SL + +D+ R
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAF 368
++++G + A ++ Y + ++ + + P+ V +I +
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEY 567
Query: 369 AQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPR 428
+ +A S + M+ G+ D T+ L++ + K+D++ +F M GI P
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKGIAPD 626
Query: 429 SEHYACLVDVMSRAGQLQRACEI 451
Y L++ S+ G +Q+A I
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSI 649
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 164/392 (41%), Gaps = 79/392 (20%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALF 91
DV+ + I FS+ GN+ A +FD+M T +V+ +N +L + SG + ++ L
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELL 685
Query: 92 DAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQR 151
D M +K + NA +Y +I G+ K G L +A R
Sbjct: 686 DEMSVKGL---------------------------HPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 152 LFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR---RNEVSWTVMING 204
LF EM P+ YT ++DG ++ + + RA +F + + + +IN
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLND---VERAITIFGTNKKGCASSTAPFNALINW 775
Query: 205 LVENGLYEEAWEL--------FGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRD 256
+ + G E E+ F R + N V MI CK+G ++ A LF Q++ +
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 257 ----IASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGR 312
+ ++ ++ GY + GR E +F + + G++PD +++ + A L +G
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIIN-----AFLKEGM 890
Query: 313 QTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHV 372
T ALV+ + +V++ S C +++ F + + ++
Sbjct: 891 TTKALVLVDQMFAKNAVDDGCKLSISTCRALLS---GFAKVGEMEV-------------- 933
Query: 373 LYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
A + M+ + PD T + L++ C
Sbjct: 934 ----AEKVMENMVRLQYIPDSATVIELINESC 961
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 184/411 (44%), Gaps = 31/411 (7%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVV----TWNSMLTAYWHSGFPQHSRALFDAMP---- 95
+ + + G++ A Q+ + M +V+ T+N ++ ++G + L DAM
Sbjct: 282 VYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKL 341
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR 151
+VV++N ++ GC + + EA M + N ++N + K + R
Sbjct: 342 QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTR 401
Query: 152 LFKEMP-----CPNVVSYTVMIDGYVKVKE-GGGIARARALFDAMPRRNEVSWTVMINGL 205
KE+ P++V+Y +I Y+KV + G + R + + N ++ +++ L
Sbjct: 402 KVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDAL 461
Query: 206 VENGLYEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAWTLFQQIR----CRDI 257
+ +EA L ++ + +I GF ++ KV++A ++ +++ +
Sbjct: 462 CKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTV 521
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+++N +I G +G+ E A+ F ++ +G+ PDD F S+ +++ + Y
Sbjct: 522 STFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQT----SQPDIVSWNTIIAAFAQHVL 373
IKH F D N L+ K G + + L F T + D V++NT+I+AF +
Sbjct: 582 SIKHSFKPDNYTCNILLNGLCKEG-MTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKK 640
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYG 424
+A +M G+ PD T+ S +S+ GK+ E+ L +G
Sbjct: 641 LKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 185/458 (40%), Gaps = 78/458 (17%)
Query: 64 PTKDVVTWNSMLTAYWHSGFPQHSRALFDAM---PMK-NVVSWNAMVAGCVQ-------- 111
P ++ L+AY H G P + +F M +K N+++ N ++ G V+
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 112 --NDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDA----QRLFKEMPC-PNVVSY 164
++ D+ ++ N ++N +++G+ G+L DA +R+ E P+ V+Y
Sbjct: 187 SAREVFDDMVKIGVSL---NVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 165 TVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGR 220
++ K G ++ + L M + N V++ ++ G + G +EA+++
Sbjct: 244 NTILKAMSK---KGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVEL 300
Query: 221 MPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQIRC----RDIASWNIMITGYAQNGR 272
M Q NV+ +I G C G + E L ++ D+ ++N +I G + G
Sbjct: 301 MKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGL 360
Query: 273 GEEALNLFSQMVRTGMQPDDLIF-VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNN 331
EA L QM G++ + + +SL C R+ LV HGF D+ +
Sbjct: 361 SLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH 420
Query: 332 ALVTMYSKCGSIVDSELAFGQTSQP----------------------------------- 356
L+ Y K G + + + Q
Sbjct: 421 TLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKR 480
Query: 357 ----DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
D V++ T+I F + KA +D+M V + P TF SL+ C GK + +
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELA 540
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACE 450
M F+ + + G+ P + ++ + G++++A E
Sbjct: 541 MEKFDELA-ESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 144/341 (42%), Gaps = 40/341 (11%)
Query: 126 PERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIA 181
P + A ++ +S ++ G+ A ++F++M PN+++ ++ G V+ I+
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 182 RARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGK 241
AR +FD M V V +N V ++ G+C +GK
Sbjct: 187 SAREVFDDM-----VKIGVSLN----------------------VQTFNVLVNGYCLEGK 219
Query: 242 VDEAWTLFQQIRCR-----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
+++A + +++ D ++N ++ ++ GR + L M + G+ P+ + +
Sbjct: 220 LEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 297 SLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTS- 354
+L L L + Q L+ + DL N L+ GS+ + EL S
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 355 --QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
QPD+V++NT+I + L +AR +QM GV+ + +T L C+ K +
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
+V +G P Y L+ + G L A E++R
Sbjct: 400 TRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMR 440
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 160/343 (46%), Gaps = 27/343 (7%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFGRLCDAQRLF 153
+ V +N ++ G + EA M E + N +++G G++ DA L
Sbjct: 157 DTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLI 216
Query: 154 KEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EVSWTVMINGL 205
M PN V+Y +++ K G A A L M RN V ++++I+GL
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCK---SGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA--- 258
++G + A+ LF M K +++ +I GFC G+ D+ L + + R I+
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 259 -SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+++++I + + G+ EA L +M++ G+ P+ + + SL L++ Q L
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVL 373
+I G D D+ N L+ Y K I D F + S + V++NT++ F Q
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
A+ F +M++ VRPD +++ LL C G++++++ +F
Sbjct: 454 LEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 157/335 (46%), Gaps = 39/335 (11%)
Query: 36 DVYRANLNIAAFSRAG----NITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALF 91
D+ N I F AG R + + + +VVT++ ++ ++ G + + L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 92 DAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKF 143
M + N +++N+++ G + + L+EA M + + ++N +I+G+ K
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 144 GRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NE 195
R+ D LF+EM N V+Y ++ G+ + G + A+ LF M R +
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFC---QSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTAM----ITGFCKQGKVDEAWTLFQQ 251
VS+ ++++GL +NG E+A E+FG++ + + + I G C KVD+AW LF
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 252 IRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
+ + D ++NIMI+ + +A LF +M G PD+L + L A L
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA----HL 589
Query: 308 LDQGRQTYALVIKH----GFDSDLSVNNALVTMYS 338
D T A +I+ GF +D+S ++ M S
Sbjct: 590 GDDDATTAAELIEEMKSSGFPADVSTVKMVINMLS 624
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 182/415 (43%), Gaps = 65/415 (15%)
Query: 51 GNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSW 102
G ++ A + D+M + VT+ +L SG + L M +N+ V +
Sbjct: 207 GKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMP- 157
+ ++ G ++ LD AFN F M + + +YN +I GF GR D +L ++M
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 158 ---CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGL 210
PNVV+++V+ID +VK G + A L M +R N +++ +I+G +
Sbjct: 327 RKISPNVVTFSVLIDSFVK---EGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 211 YEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI----ASWNI 262
EEA ++ M K +++ +I G+CK ++D+ LF+++ R + ++N
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNT 443
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
++ G+ Q+G+ E A LF +MV ++PD + + L L++ + + + K
Sbjct: 444 LVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSK 503
Query: 323 FDSDLSVNNALVTMYSKC-GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYF 381
+ D+ + ++ ++ C S VD +W+ F
Sbjct: 504 MELDIGI--YMIIIHGMCNASKVDD-------------AWD-----------------LF 531
Query: 382 DQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLV 436
+ GV+ D + ++S CR + ++ LF M + G P Y L+
Sbjct: 532 CSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE-GHAPDELTYNILI 585
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 202/471 (42%), Gaps = 42/471 (8%)
Query: 16 SSTARHTHFLLVFA--KHFSS----YDVYRANLNIAAFSRAGNITAARQVFDKMPT---- 65
S+ A+ + LV A K S + +Y ++ I F R ++ A K+
Sbjct: 96 SAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE 155
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAM----PMKNVVSWNAMVAGCVQNDMLDEAFNY 121
D V +N++L + L D M +++ N +V G N + +A
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215
Query: 122 FAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMPCPNV----VSYTVMIDGYVK 173
M E N +Y +++ K G+ A L ++M N+ V Y+++IDG K
Sbjct: 216 IDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 174 VKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----N 225
G + A LF+ M + + +++ +I G G +++ +L M ++ N
Sbjct: 276 ---DGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPN 332
Query: 226 VVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFS 281
VV + +I F K+GK+ EA L +++ R IA ++N +I G+ + R EEA+ +
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
M+ G PD + F L +D G + + + G ++ N LV + + G
Sbjct: 393 LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSG 452
Query: 342 SIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFL 397
+ ++ F + +PDIVS+ ++ + KA F ++ + D ++
Sbjct: 453 KLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYM 512
Query: 398 SLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
++ C A K+D++ +LF + G+ + Y ++ + R L +A
Sbjct: 513 IIIHGMCNASKVDDAWDLF-CSLPLKGVKLDARAYNIMISELCRKDSLSKA 562
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 91/193 (47%), Gaps = 19/193 (9%)
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVI-------KHGFD 324
+ ++A++LF M+++ P + F LF+A A + Y LV+ G
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAK-------TKQYELVLALCKQMESKGIA 120
Query: 325 SDLSVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQHVLYYKARSY 380
+ + ++ + +C + + G+ +PD V +NT++ +A
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
D+M+ +G +P IT +L++ C GK+ +++ L + MV + G P Y +++VM
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV-ETGFQPNEVTYGPVLNVMC 239
Query: 441 RAGQLQRACEIIR 453
++GQ A E++R
Sbjct: 240 KSGQTALAMELLR 252
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 184/399 (46%), Gaps = 34/399 (8%)
Query: 49 RAGNITAARQVFDKMPTK----DVVTWNSMLTAYWH-SGFPQHSRAL--FDAMPMKNVVS 101
R+GN + + + M K DV+ ++ ++ P+ R + + +V +
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERN----AASYNAMISGFIKFGRLCDAQRLFKEM- 156
+NA++ G + + +D+A M ++ +YN MI G+L A ++ ++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 157 --PC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENG 209
C P V++YT++I+ + GG+ A L D M R + ++ +I G+ + G
Sbjct: 221 SDNCQPTVITYTILIEATML---EGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 210 LYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQI---RCR-DIASWN 261
+ + A+E+ + K +V++ ++ QGK +E L ++ +C ++ +++
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 262 IMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKH 321
I+IT ++G+ EEA+NL M G+ PD + L A LD + +I
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 322 GFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKA 377
G D+ N ++ K G + FG+ + P+ S+NT+ +A +A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
+M++ G+ PD IT+ S++S CR G +DE+ L
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELL 496
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 202/452 (44%), Gaps = 41/452 (9%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKD----VVTWNSMLTAYWHSGFPQ 85
+ F DV+ N I F + I A +V D+M +KD VT+N M+ + G
Sbjct: 151 EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 86 HSRALFDAMPMKN----VVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMI 137
+ + + + N V+++ ++ + +DEA M R +YN +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 138 SGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYV---KVKEGGGIARARALFDAM 190
G K G + A + + + P+V+SY +++ + K +EG + +F
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK--MFSEK 328
Query: 191 PRRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAW 246
N V+++++I L +G EEA L M +K + +I FC++G++D A
Sbjct: 329 CDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 247 TLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTAC 302
+ + DI ++N ++ +NG+ ++AL +F ++ G P+ + ++F+A
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 303 ASLALLDQGRQTYALV--IKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTS---QP 356
S D+ R + ++ + +G D D N++++ + G + ++ EL S P
Sbjct: 449 WSSG--DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHP 506
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
+V++N ++ F + A + + M+ G RP+ T+ L+ AG E+M L
Sbjct: 507 SVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELA 566
Query: 417 NLMVHDYGIP----PRSEHYACLVDVMSRAGQ 444
N +V I R L++V+ R+ Q
Sbjct: 567 NDLVRIDAISEYSFKRLHRTFPLLNVLQRSSQ 598
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 119/250 (47%), Gaps = 14/250 (5%)
Query: 213 EAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYA 268
E E FG Q +V A A+I GFCK ++D+A + ++R +D + ++NIMI
Sbjct: 148 EILEKFG---QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLC 204
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
G+ + AL + +Q++ QP + + L A +D+ + ++ G D+
Sbjct: 205 SRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMF 264
Query: 329 VNNALVTMYSKCGSIVDSELAFGQT-----SQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
N ++ K G +VD + +PD++S+N ++ A + + +
Sbjct: 265 TYNTIIRGMCKEG-MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
M + P+ +T+ L++ CR GKI+E+MNL LM + G+ P + Y L+ R G
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM-KEKGLTPDAYSYDPLIAAFCREG 382
Query: 444 QLQRACEIIR 453
+L A E +
Sbjct: 383 RLDVAIEFLE 392
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 144/337 (42%), Gaps = 51/337 (15%)
Query: 132 SYNAMISGFIKFGRLCDAQRLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALF 187
+YNA+I+GF K R+ DA R+ M P+ V+Y +MI G + A +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCS---RGKLDLALKVL 216
Query: 188 DAMPRRN----EVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQ 239
+ + N +++T++I + G +EA +L M + ++ +I G CK+
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 240 GKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
G VD A+ + + + + D+ S+NI++ G+ EE L ++M P+ + +
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 296 VSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ 355
L T +++ L+ + G
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGL-------------------------------T 365
Query: 356 PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNL 415
PD S++ +IAAF + A + + MI+ G PD + + ++L+ C+ GK D+++ +
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425
Query: 416 FNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
F + + G P S Y + + +G RA +I
Sbjct: 426 FG-KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMI 461
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/445 (24%), Positives = 190/445 (42%), Gaps = 63/445 (14%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALF 91
D N I G ++ A + D+M DVVT+NS++ SG + L
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLL 216
Query: 92 DAMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKF 143
M +NV +++ ++ ++ +D A + F M + S YN+++ G K
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276
Query: 144 GRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NE 195
G+ D L K+M PNV+++ V++D +VK G + A L+ M R N
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK---EGKLQEANELYKEMITRGISPNI 333
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQ 251
+++ +++G EA + M + ++V T++I G+C +VD+ +F+
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 252 IRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
I R + +++I++ G+ Q+G+ + A LF +MV G+ PD + + L L
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG-----L 448
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAA 367
D G+ AL I S++ G IV + TII
Sbjct: 449 CDNGKLEKALEIFEDLQK--------------------SKMDLG------IVMYTTIIEG 482
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
+ A + F + GV+P+ +T+ ++S C+ G + E+ L M D G P
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED-GNAP 541
Query: 428 RSEHYACLVDVMSRAGQLQRACEII 452
Y L+ R G L + ++I
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLI 566
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 197/468 (42%), Gaps = 61/468 (13%)
Query: 16 SSTARHTHFLLV--FAKHFS----SYDVYRANLNIAAFSRAGNITAARQVFDKMPT---- 65
S+ AR F LV F K ++++Y N+ I F R A V K+
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155
Query: 66 KDVVTWNSMLTAYWHSGFPQHSRALFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNY 121
D T+N+++ + G + L D M +VV++N++V G ++ A +
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 122 FAAMPERNAA----SYNAMISGFIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEG 177
M ERN +Y+ +I + G + A LFKEM E
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM-------------------ET 256
Query: 178 GGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK----NVVASTAMI 233
GI + + V++ ++ GL + G + + L M + NV+ ++
Sbjct: 257 KGI-----------KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 234 TGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQ 289
F K+GK+ EA L++++ R +I ++N ++ GY R EA N+ MVR
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 290 PDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELA 349
PD + F SL + +D G + + + K G ++ + LV + + G I +E
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 350 FGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCR 405
F + PD++++ ++ + KA F+ + + + + +++ C+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 406 AGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
GK++++ NLF + G+ P Y ++ + + G L A ++R
Sbjct: 486 GGKVEDAWNLF-CSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 158/371 (42%), Gaps = 79/371 (21%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALF 91
DV+ + I + R G I AA +F +M TK VVT+NS++ +G L
Sbjct: 227 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLL 286
Query: 92 DAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKF 143
M + NV+++N ++ V+ L EA + M R N +YN ++ G+
Sbjct: 287 KDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQ 346
Query: 144 GRLCDAQRLFKEM---PC-PNVVSYTVMIDGYVKVK------------------------ 175
RL +A + M C P++V++T +I GY VK
Sbjct: 347 NRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 176 --------EGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQ 223
+ G I A LF M + +++ ++++GL +NG E+A E+F + +
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 224 KN----VVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEE 275
+V T +I G CK GKV++AW LF + C+ ++ ++ +MI+G + G E
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 276 ALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVT 335
A L +M G P+D + +L A H D DL+ + L+
Sbjct: 527 ANILLRKMEEDGNAPNDCTYNTLIRA-------------------HLRDGDLTASAKLIE 567
Query: 336 MYSKCGSIVDS 346
CG D+
Sbjct: 568 EMKSCGFSADA 578
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 13/190 (6%)
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA----LLDQGRQTYALVIKHGFDSDL 327
+ ++A+ LF +M+R+ P + F F+A A +LD +Q +G ++
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLEL----NGIAHNI 123
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
N ++ + +C + G+ +PD ++NT+I +A D+
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
M+ G +PD +T+ S+++ CR+G +++L M + + Y+ ++D + R G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDG 242
Query: 444 QLQRACEIIR 453
+ A + +
Sbjct: 243 CIDAAISLFK 252
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 119/232 (51%), Gaps = 9/232 (3%)
Query: 230 TAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQ-----NGRGEEALNLFSQM- 283
T ++ + K G + A +F ++ R +WN MI GY N +A+ LF +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 284 -VRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF--DSDLSVNNALVTMYSKC 340
+G++P D V + +A + LL+ G + + K GF + D+ + ALV MYSKC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 341 GSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLL 400
G + ++ F ++ +W ++ A + + + ++M G++P+ ITF SLL
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLL 330
Query: 401 SVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
S G ++E + LF M +G+ P EHY C+VD++ +AG++Q A + I
Sbjct: 331 SAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFI 382
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 121/244 (49%), Gaps = 16/244 (6%)
Query: 140 FIKFGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGG--IARARALFDAMP------ 191
+ K G L A+++F EMP V++ MI GY K+ G +A LF
Sbjct: 157 YAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGV 216
Query: 192 RRNEVSWTVMINGLVENGLYEEA------WELFGRMPQKNVVASTAMITGFCKQGKVDEA 245
R + + +++ + + GL E E G P+ +V TA++ + K G ++ A
Sbjct: 217 RPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNA 276
Query: 246 WTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASL 305
+++F+ ++ +++ +W M TG A NGRG E NL ++M +G++P+++ F SL +A +
Sbjct: 277 FSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHI 336
Query: 306 ALLDQGRQTY-ALVIKHGFDSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNT 363
L+++G + + ++ + G + +V + K G I ++ + +PD + +
Sbjct: 337 GLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRS 396
Query: 364 IIAA 367
+ A
Sbjct: 397 LCNA 400
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/504 (20%), Positives = 211/504 (41%), Gaps = 106/504 (21%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRALF 91
D Y N I R A QVF++M + D VT+N++L Y S P+ + +
Sbjct: 278 DAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVL 337
Query: 92 DAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKF 143
+ M + ++V++N++++ ++ MLDEA M E+ +Y ++SGF +
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 144 GRLCDAQRLFKEM---PC-PNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNE 195
G++ A +F+EM C PN+ ++ I Y G +FD + +
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMY---GNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 196 VSWTVMINGLVENGLYEEAWELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQ 251
V+W ++ +NG+ E +F M + V +I+ + + G ++A T++++
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 252 IR----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTA------ 301
+ D++++N ++ A+ G E++ + ++M +P++L + SL A
Sbjct: 515 MLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKE 574
Query: 302 -----------------------------CASLALLDQGRQTYALVIKHGFDSDLSVNNA 332
C+ LL + + ++ + + GF D++ N+
Sbjct: 575 IGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNS 634
Query: 333 LVTMY------SKCGSIVD----------------------SELAFGQTSQ--------- 355
+V++Y +K ++D FG++ +
Sbjct: 635 MVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKG 694
Query: 356 --PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM 413
PDI+S+NT+I A+ ++ A F +M G+ PD IT+ + + +E++
Sbjct: 695 IKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAI 754
Query: 414 NLFNLMVHDYGIPPRSEHYACLVD 437
+ M+ +G P Y +VD
Sbjct: 755 GVVRYMIK-HGCRPNQNTYNSIVD 777
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 196/460 (42%), Gaps = 53/460 (11%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKM------PTKDVVTWNSMLTAYWHSGFPQHS 87
S DVY I+AF+ +G A VF KM PT ++T+N +L + G P +
Sbjct: 205 SLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPT--LITYNVILNVFGKMGTPWNK 262
Query: 88 -RALFDAMPMKNVV----SWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMIS 138
+L + M + ++N ++ C + + EA F M + +YNA++
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 139 GFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN 194
+ K R +A ++ EM P++V+Y +I Y AR L +AM +N
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAY---------ARDGMLDEAMELKN 373
Query: 195 EV----------SWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQG 240
++ ++T +++G G E A +F M + N+ A I + +G
Sbjct: 374 QMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRG 433
Query: 241 KVDEAWTLFQQIRC----RDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFV 296
K E +F +I DI +WN ++ + QNG E +F +M R G P+ F
Sbjct: 434 KFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFN 493
Query: 297 SLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTS-- 354
+L +A + +Q Y ++ G DLS N ++ ++ G SE +
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDG 553
Query: 355 --QPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDES 412
+P+ +++ +++ A+A S +++ + + P + +L+ VC + + E+
Sbjct: 554 RCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEA 613
Query: 413 MNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEII 452
F+ + + G P +V + R + +A ++
Sbjct: 614 ERAFSEL-KERGFSPDITTLNSMVSIYGRRQMVAKANGVL 652
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/451 (20%), Positives = 193/451 (42%), Gaps = 47/451 (10%)
Query: 29 AKHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPT----KDVVTWNSMLTAYWHSGFP 84
A+ + DV+ ++ F RAG + +A +F++M ++ T+N+ + Y + G
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKF 435
Query: 85 QHSRALFDAMPM----KNVVSWNAMVAGCVQNDMLDEAFNYFAAM------PERNAASYN 134
+FD + + ++V+WN ++A QN M E F M PER ++N
Sbjct: 436 TEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFN 493
Query: 135 AMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMIDGYVKVKEGGGIARARALF--- 187
+IS + + G A +++ M P++ +Y ++ + GG ++ +
Sbjct: 494 TLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALAR---GGMWEQSEKVLAEM 550
Query: 188 -DAMPRRNEVSWTVMI----NGLVENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKV 242
D + NE+++ ++ NG ++ A E++ + + V ++ K +
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLL 610
Query: 243 DEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSL 298
EA F +++ R DI + N M++ Y + +A + M G P + SL
Sbjct: 611 PEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 299 FTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ--- 355
+ A + + ++ G D+ N ++ Y + + D+ F +
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 356 -PDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESM- 413
PD++++NT I ++A ++ +A MI G RP+ T+ S++ C+ + DE+
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKL 790
Query: 414 ---NLFNLMVHDYGIPPRSEHYACLVDVMSR 441
+L NL H P+ E L ++ +
Sbjct: 791 FVEDLRNLDPH----APKGEDLRLLERIVKK 817
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 109/253 (43%), Gaps = 17/253 (6%)
Query: 213 EAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQ-IRCRDIASW------NIMIT 265
E +E F P+ A + G K D A F ++ +D S I+I+
Sbjct: 122 ELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIIS 181
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
+ GR A N+F+ + G D + SL +A A+ + + + + G
Sbjct: 182 MLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKP 241
Query: 326 DLSVNNALVTMYSKCG-------SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKAR 378
L N ++ ++ K G S+V+ + G PD ++NT+I + L+ +A
Sbjct: 242 TLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIA--PDAYTYNTLITCCKRGSLHQEAA 299
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F++M A G D +T+ +LL V ++ + E+M + N MV + G P Y L+
Sbjct: 300 QVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNSLISA 358
Query: 439 MSRAGQLQRACEI 451
+R G L A E+
Sbjct: 359 YARDGMLDEAMEL 371
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 193/443 (43%), Gaps = 32/443 (7%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +VY L+ + A I R+ + +V ++N ++ G + + L
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 94 MPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGR 145
M +K +V+S++ +V G + LD+ + M + N+ Y ++I + +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 146 LCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EVS 197
L +A+ F EM P+ V YT +IDG+ K G I A F M R+ ++
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK---RGDIRAASKFFYEMHSRDITPDVLT 388
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQ--- 250
+T +I+G + G EA +LF M K + V T +I G+CK G + +A+ +
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 251 QIRCR-DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
Q C ++ ++ +I G + G + A L +M + G+QP+ + S+ ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL----AFGQTSQPDIVSWNTII 365
+ + G ++D L+ Y K G + ++ G+ QP IV++N ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
F H + + M+A G+ P+ TF SL+ C + + ++ M G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC-SRGV 627
Query: 426 PPRSEHYACLVDVMSRAGQLQRA 448
P + Y LV +A ++ A
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEA 650
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 186/417 (44%), Gaps = 35/417 (8%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRAL 90
++V N+ I + G I A + M K DV+++++++ Y G L
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 91 FDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIK 142
+ M K N + +++ + L EA F+ M + + Y +I GF K
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 143 FGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----N 194
G + A + F EM P+V++YT +I G+ ++ G + A LF M + +
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI---GDMVEAGKLFHEMFCKGLEPD 420
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQ 250
V++T +ING + G ++A+ + M Q NVV T +I G CK+G +D A L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 251 QI----RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
++ +I ++N ++ G ++G EEA+ L + G+ D + + +L A
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL----AFGQTSQPDIVSWN 362
+D+ ++ ++ G + N L+ + G + D E + P+ ++N
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+++ + A + + M + GV PDG T+ +L+ C+A + E+ LF M
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 153/352 (43%), Gaps = 55/352 (15%)
Query: 122 FAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVK 173
F PE N ASYN +I + GR+ +A L M P+V+SY+ +++GY +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 174 VKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNV--- 226
G + + L + M R+ N + +I L EA E F M ++ +
Sbjct: 294 F---GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 227 -VASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFS 281
V T +I GFCK+G + A F ++ RDI ++ +I+G+ Q G EA LF
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+M G++PD + F L + + + +I+ G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------------------- 451
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
P++V++ T+I + A +M +G++P+ T+ S+++
Sbjct: 452 ------------CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C++G I+E++ L G+ + Y L+D ++G++ +A EI++
Sbjct: 500 GLCKSGNIEEAVKLVG-EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 217 LFGRMPQKNV---VASTAMITGF-CKQGKVDEAWTLFQQIRCR----DIASWNIMITGYA 268
+F P+ V VAS ++ F C+ G++ EA L + + D+ S++ ++ GY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
+ G ++ L M R G++P+ I+ S+ + L + + ++ +I+ G D
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
V L+ + K G I + F + PD++++ II+ F Q +A F +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
G+ PD +TF L++ C+AG + ++ + N M+ G P Y L+D + + G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGD 471
Query: 445 LQRACEII 452
L A E++
Sbjct: 472 LDSANELL 479
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 68/324 (20%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSG-----FPQH 86
DV I+ F + G++ A ++F +M K D VT+ ++ Y +G F H
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIK 142
+ + A NVV++ ++ G + LD A M + N +YN++++G K
Sbjct: 445 NH-MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 143 FGRLCDAQRLFKEMPCP----NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE--- 195
G + +A +L E + V+YT ++D Y K G + +A+ + M +
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK---SGEMDKAQEILKEMLGKGLQPT 560
Query: 196 -VSWTVMINGLVENGLYEEAWELFGRMPQK--------------------NVVASTA--- 231
V++ V++NG +G+ E+ +L M K N+ A+TA
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 232 ----------------MITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNG 271
++ G CK + EAW LFQ+++ + +++++++I G+ +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 272 RGEEALNLFSQMVRTGMQPDDLIF 295
+ EA +F QM R G+ D IF
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 193/443 (43%), Gaps = 32/443 (7%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFDA 93
S +VY L+ + A I R+ + +V ++N ++ G + + L
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLL 271
Query: 94 MPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGR 145
M +K +V+S++ +V G + LD+ + M + N+ Y ++I + +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 146 LCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EVS 197
L +A+ F EM P+ V YT +IDG+ K G I A F M R+ ++
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK---RGDIRAASKFFYEMHSRDITPDVLT 388
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQ--- 250
+T +I+G + G EA +LF M K + V T +I G+CK G + +A+ +
Sbjct: 389 YTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMI 448
Query: 251 QIRCR-DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLD 309
Q C ++ ++ +I G + G + A L +M + G+QP+ + S+ ++
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 310 QGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL----AFGQTSQPDIVSWNTII 365
+ + G ++D L+ Y K G + ++ G+ QP IV++N ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLM 568
Query: 366 AAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGI 425
F H + + M+A G+ P+ TF SL+ C + + ++ M G+
Sbjct: 569 NGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC-SRGV 627
Query: 426 PPRSEHYACLVDVMSRAGQLQRA 448
P + Y LV +A ++ A
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEA 650
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 186/417 (44%), Gaps = 35/417 (8%)
Query: 35 YDVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRAL 90
++V N+ I + G I A + M K DV+++++++ Y G L
Sbjct: 244 WNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKL 303
Query: 91 FDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIK 142
+ M K N + +++ + L EA F+ M + + Y +I GF K
Sbjct: 304 IEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 143 FGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----N 194
G + A + F EM P+V++YT +I G+ ++ G + A LF M + +
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI---GDMVEAGKLFHEMFCKGLEPD 420
Query: 195 EVSWTVMINGLVENGLYEEAWELFGRMPQ----KNVVASTAMITGFCKQGKVDEAWTLFQ 250
V++T +ING + G ++A+ + M Q NVV T +I G CK+G +D A L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 251 QI----RCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
++ +I ++N ++ G ++G EEA+ L + G+ D + + +L A
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSEL----AFGQTSQPDIVSWN 362
+D+ ++ ++ G + N L+ + G + D E + P+ ++N
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLM 419
+++ + A + + M + GV PDG T+ +L+ C+A + E+ LF M
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 153/352 (43%), Gaps = 55/352 (15%)
Query: 122 FAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVK 173
F PE N ASYN +I + GR+ +A L M P+V+SY+ +++GY +
Sbjct: 234 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 293
Query: 174 VKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQKNV--- 226
G + + L + M R+ N + +I L EA E F M ++ +
Sbjct: 294 F---GELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPD 350
Query: 227 -VASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFS 281
V T +I GFCK+G + A F ++ RDI ++ +I+G+ Q G EA LF
Sbjct: 351 TVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFH 410
Query: 282 QMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCG 341
+M G++PD + F L + + + +I+ G
Sbjct: 411 EMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------------------- 451
Query: 342 SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
P++V++ T+I + A +M +G++P+ T+ S+++
Sbjct: 452 ------------CSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVN 499
Query: 402 VCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
C++G I+E++ L G+ + Y L+D ++G++ +A EI++
Sbjct: 500 GLCKSGNIEEAVKLVG-EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 118/248 (47%), Gaps = 13/248 (5%)
Query: 217 LFGRMPQKNV---VASTAMITGF-CKQGKVDEAWTLFQQIRCR----DIASWNIMITGYA 268
+F P+ V VAS ++ F C+ G++ EA L + + D+ S++ ++ GY
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 269 QNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
+ G ++ L M R G++P+ I+ S+ + L + + ++ +I+ G D
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 329 VNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARSYFDQM 384
V L+ + K G I + F + PD++++ II+ F Q +A F +M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 385 IAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQ 444
G+ PD +TF L++ C+AG + ++ + N M+ G P Y L+D + + G
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGD 471
Query: 445 LQRACEII 452
L A E++
Sbjct: 472 LDSANELL 479
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 68/324 (20%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK----DVVTWNSMLTAYWHSG-----FPQH 86
DV I+ F + G++ A ++F +M K D VT+ ++ Y +G F H
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444
Query: 87 SRALFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM----PERNAASYNAMISGFIK 142
+ + A NVV++ ++ G + LD A M + N +YN++++G K
Sbjct: 445 NH-MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 143 FGRLCDAQRLFKEMPCP----NVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNE--- 195
G + +A +L E + V+YT ++D Y K G + +A+ + M +
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK---SGEMDKAQEILKEMLGKGLQPT 560
Query: 196 -VSWTVMINGLVENGLYEEAWELFGRMPQK--------------------NVVASTA--- 231
V++ V++NG +G+ E+ +L M K N+ A+TA
Sbjct: 561 IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYK 620
Query: 232 ----------------MITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNG 271
++ G CK + EAW LFQ+++ + +++++++I G+ +
Sbjct: 621 DMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRK 680
Query: 272 RGEEALNLFSQMVRTGMQPDDLIF 295
+ EA +F QM R G+ D IF
Sbjct: 681 KFLEAREVFDQMRREGLAADKEIF 704
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 36/362 (9%)
Query: 67 DVVTWNSMLTAYWHSGFPQHSRALFDAMPM----KNVVSWNAMVAGCVQ---NDMLDEAF 119
+V T+N ++ A +G +R + + M + NVVS+N ++ G + N + +A
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 120 NYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMIDGY 171
M E N ++N +I GF K L + ++FKEM PNV+SY +I+G
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGL 341
Query: 172 VKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYEEAWELFGRMPQKNVV 227
GG I+ A ++ D M + N +++ +ING +N + +EA ++FG + + V
Sbjct: 342 C---NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 228 ASTAM----ITGFCKQGKVDEAWTLFQQIR----CRDIASWNIMITGYAQNGRGEEALNL 279
+T M I +CK GK+D+ + L +++ D+ ++N +I G +NG E A L
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKL 458
Query: 280 FSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSK 339
F Q+ G+ PD + F L + + K G N ++ Y K
Sbjct: 459 FDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCK 517
Query: 340 CGSI-----VDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
G++ + +++ + + ++ S+N ++ ++Q A ++M+ G+ P+ I
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRI 577
Query: 395 TF 396
T+
Sbjct: 578 TY 579
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 145/283 (51%), Gaps = 31/283 (10%)
Query: 41 NLNIAAFSRAGNITAARQVFDKMPTKDV----VTWNSMLTAYWHSGFPQHSRALFDAMP- 95
N+ I F + N+ + +VF +M +DV +++NS++ + G + ++ D M
Sbjct: 300 NILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVS 359
Query: 96 ---MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGRLCD 148
N++++NA++ G +NDML EA + F ++ + A YN +I + K G++ D
Sbjct: 360 AGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDD 419
Query: 149 AQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR---NEVSWTVM 201
L +EM P+V +Y +I G + G I A+ LFD + + + V++ ++
Sbjct: 420 GFALKEEMEREGIVPDVGTYNCLIAGLCR---NGNIEAAKKLFDQLTSKGLPDLVTFHIL 476
Query: 202 INGLVENGLYEEAWELFGRMPQKNV----VASTAMITGFCKQGKVDEAWTLFQQI----R 253
+ G G +A L M + + + ++ G+CK+G + A + Q+ R
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 254 CR-DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIF 295
R ++AS+N+++ GY+Q G+ E+A L ++M+ G+ P+ + +
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 183/431 (42%), Gaps = 56/431 (12%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVVTWNSMLT-----AYWHS-----GFPQHSRALFDA 93
+ F R G+ +F + D V NS++ AY ++ GF R+ +
Sbjct: 124 LDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYG 183
Query: 94 MPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPER---NAASYNAMISGFIKFGRLCDAQ 150
+ + M+A +N D + Y + + N ++N +I+ K G++ A+
Sbjct: 184 YKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 151 RLFKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLV 206
+ ++M PNVVSY +IDGY K+ G + +A A+ M V
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEM---------------V 288
Query: 207 ENGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNI 262
EN + N+ +I GF K + + +F+++ +D+ S+N
Sbjct: 289 ENDV------------SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNS 336
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I G G+ EA+++ +MV G+QP+ + + +L +L + + V G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ-----PDIVSWNTIIAAFAQHVLYYKA 377
+ N L+ Y K G I D A + + PD+ ++N +IA ++ A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKI-DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVD 437
+ FDQ+ + G+ PD +TF L+ CR G+ ++ L M G+ PR Y ++
Sbjct: 456 KKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEM-SKMGLKPRHLTYNIVMK 513
Query: 438 VMSRAGQLQRA 448
+ G L+ A
Sbjct: 514 GYCKEGNLKAA 524
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 21/163 (12%)
Query: 36 DVYRANLNIAAFSRAGNITAARQVFDKMPTK---DVVTWNSMLTAYWHSGFPQHSRALFD 92
DV N IA R GNI AA+++FD++ +K D+VT++ ++ Y G + + L
Sbjct: 435 DVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLK 494
Query: 93 AMPMKNV----VSWNAMVAGCVQNDMLDEAFNYFAAMPER-----NAASYNAMISGFIKF 143
M + +++N ++ G + L A N M + N ASYN ++ G+ +
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554
Query: 144 GRLCDAQRLFKEM----PCPNVVSYTV----MID-GYVKVKEG 177
G+L DA L EM PN ++Y + M+D G+V EG
Sbjct: 555 GKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 158/344 (45%), Gaps = 27/344 (7%)
Query: 98 NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFGRLCDAQRLF 153
+ V+++ ++ G + EA M E + NA+++G G++ DA L
Sbjct: 141 DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLI 200
Query: 154 KEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGL 205
M PN V+Y ++ K G A A L M R + V ++++I+GL
Sbjct: 201 DRMVETGFQPNEVTYGPVLKVMCK---SGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 206 VENGLYEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DI 257
++G + A+ LF M K +++ T +I GFC G+ D+ L + + R D+
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
+++ +I + + G+ EA L +M++ G+ PD + + SL LD+ L
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVL 373
++ G ++ N L+ Y K I D F + S D V++NT+I F +
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 374 YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFN 417
A+ F +M++ VRPD +++ LL C G+ ++++ +F
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFE 481
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 189/430 (43%), Gaps = 37/430 (8%)
Query: 51 GNITAARQVFDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMPMKNV----VSW 102
G ++ A + D+M + VT+ +L SG + L M + + V +
Sbjct: 191 GKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 103 NAMVAGCVQNDMLDEAFNYFAAMPERNAAS----YNAMISGFIKFGRLCDAQRLFKEMP- 157
+ ++ G ++ LD AFN F M + + Y +I GF GR D +L ++M
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 158 ---CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGL 210
P+VV+++ +ID +VK G + A L M +R + V++T +I+G +
Sbjct: 311 RKITPDVVAFSALIDCFVK---EGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQ 367
Query: 211 YEEAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNI 262
++A + M K N+ +I G+CK +D+ LF+++ R D ++N
Sbjct: 368 LDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 263 MITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHG 322
+I G+ + G+ E A LF +MV ++PD + + L ++ + + + K
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 323 FDSDLSVNNALVTMYSKCGSIVDSELAFG----QTSQPDIVSWNTIIAAFAQHVLYYKAR 378
+ D+ + N ++ + D+ F + +PD+ ++N +I + +A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 379 SYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDV 438
F +M G P+G T+ L+ G +S L + G + +VD+
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE-EIKRCGFSVDASTVKMVVDM 606
Query: 439 MSRAGQLQRA 448
+S G+L+++
Sbjct: 607 LS-DGRLKKS 615
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 204/479 (42%), Gaps = 40/479 (8%)
Query: 9 IALKPTPSSTARHTHFLLVFAKHFSSYDVYRANLNIAAFSRAGNITA----ARQVFDKM- 63
I + + T R FL + + FSS + ++ R+G + A +F +M
Sbjct: 5 IQTRLLETGTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMT 64
Query: 64 ---PTKDVVTWNSMLTAYWHSGFPQHSRALFDAMPMK----NVVSWNAMVAGCVQNDMLD 116
P ++ ++ + + + L M +K N+ + + M+ C + L
Sbjct: 65 RSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLS 124
Query: 117 EAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEM----PCPNVVSYTVMI 168
AF+ + E + +++ +I+G GR+ +A L M P +++ ++
Sbjct: 125 LAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALV 184
Query: 169 DGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELFGRMPQK 224
+G G ++ A L D M NEV++ ++ + ++G A EL +M ++
Sbjct: 185 NGLCL---NGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 225 NV----VASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRGEEA 276
+ V + +I G CK G +D A+ LF ++ + DI + +I G+ GR ++
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 277 LNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTM 336
L M++ + PD + F +L L + + + +I+ G D +L+
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 337 YSKCGSIVDS----ELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPD 392
+ K + + +L + P+I ++N +I + + L F +M GV D
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 393 GITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+T+ +L+ C GK++ + LF MV + P Y L+D + G+ ++A EI
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRR-VRPDIVSYKILLDGLCDNGEPEKALEI 479
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 93/190 (48%), Gaps = 13/190 (6%)
Query: 272 RGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA----LLDQGRQTYALVIKHGFDSDL 327
+ ++A++LF +M R+ +P + F LF+ A +LD +Q I H +L
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH----NL 107
Query: 328 SVNNALVTMYSKCGSIVDSELAFGQT----SQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
+ ++ +C + + A G+ +PD V+++T+I +A D+
Sbjct: 108 YTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDR 167
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
M+ +G +P IT +L++ C GK+ +++ L + MV + G P Y ++ VM ++G
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSG 226
Query: 444 QLQRACEIIR 453
Q A E++R
Sbjct: 227 QTALAMELLR 236
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 191/435 (43%), Gaps = 36/435 (8%)
Query: 49 RAGNITAARQVFDKMPTKDV----VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVV---- 100
+AG++ +++ +M +++ VT+N ++ + +G + +R M
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 101 SWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIKFGRLCDAQRLFKEM 156
S+N ++ G + + D+A+ M ++YN I FGR+ DA+ L M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 157 PCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMP----RRNEVSWTVMINGLVENGLYE 212
P+VVSY ++ GY+K+ G A LFD + + V++ +I+GL E+G E
Sbjct: 370 AAPDVVSYNTLMHGYIKM---GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLE 426
Query: 213 EAWELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIA----SWNIMI 264
A L M + +V+ T ++ GF K G + A ++ ++ + I ++
Sbjct: 427 GAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQ-PDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
G + G ++A L +MV T PD I+ + L + + + + G
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQHVLYYKARS 379
D ++ Y + G + + + + P ++++ +I A+ +A
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ 606
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
Y +M GVRP+ +T +LL C+AG IDE+ M + GIPP Y L+
Sbjct: 607 YSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEE-GIPPNKYSYTMLI--- 662
Query: 440 SRAGQLQRACEIIRL 454
S+ ++ E+++L
Sbjct: 663 SKNCDFEKWEEVVKL 677
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 196/452 (43%), Gaps = 66/452 (14%)
Query: 60 FDKMPTK----DVVTWNSMLTAYWHSGFPQHSRALFDAMP----MKNVVSWNAMVAGCVQ 111
F+KM K V N +L S + A+++ M M V+++N M+ C +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250
Query: 112 NDMLDEAFNYFAAMPERN----AASYNAMISGFIKFGRLCDAQRLFKEMPCPNVV----S 163
L+ + M RN +YN +I+GF K G++ +A+R +M S
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYS 310
Query: 164 YTVMIDGYVK--------------------------------VKEGGGIARARALFDAMP 191
+ +I+GY K + + G I AR L +M
Sbjct: 311 FNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA 370
Query: 192 RRNEVSWTVMINGLVENGLYEEAWELFGRMP----QKNVVASTAMITGFCKQGKVDEAWT 247
+ VS+ +++G ++ G + EA LF + ++V +I G C+ G ++ A
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 248 LFQQIRCR----DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
L +++ + D+ ++ ++ G+ +NG A ++ +M+R G++PD + + A
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT--RAVG 488
Query: 304 SLALLDQG---RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQTSQP 356
L L D R +V DL++ N + K G++V + F P
Sbjct: 489 ELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP 548
Query: 357 DIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLF 416
D V++ T+I + ++ + AR+ +D+M+ + P IT+ L+ +AG+++++ +
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ-Y 607
Query: 417 NLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ + G+ P + L+ M +AG + A
Sbjct: 608 STEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 56/390 (14%)
Query: 33 SSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
S+Y++Y I A G I AR++ M DVV++N+++ Y G + LFD
Sbjct: 344 STYNIY-----ICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFD 398
Query: 93 AMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRL 152
+ AG + ++ +YN +I G + G L AQRL
Sbjct: 399 DLR-----------AGDIHPSIV----------------TYNTLIDGLCESGNLEGAQRL 431
Query: 153 FKEMPC----PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMING 204
+EM P+V++YT ++ G+VK G ++ A ++D M R+ + ++T G
Sbjct: 432 KEEMTTQLIFPDVITYTTLVKGFVK---NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVG 488
Query: 205 LVENGLYEEAWELFGRM-----PQKNVVASTAMITGFCKQGKVDEAWTLFQQI----RCR 255
+ G ++A+ L M ++ I G CK G + +A ++I
Sbjct: 489 ELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVP 548
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
D ++ +I GY +NG+ + A NL+ +M+R + P + + L A L+Q Q
Sbjct: 549 DHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYS 608
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQ----PDIVSWNTIIAAFAQH 371
+ K G ++ +NAL+ K G+I ++ + + P+ S+ +I+
Sbjct: 609 TEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDF 668
Query: 372 VLYYKARSYFDQMIAVGVRPDGITFLSLLS 401
+ + + +M+ + PDG T +L
Sbjct: 669 EKWEEVVKLYKEMLDKEIEPDGYTHRALFK 698
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 137/311 (44%), Gaps = 23/311 (7%)
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRN----EVSWTVMINGLVENGLYEEA 214
P V+++ M+D K G + R ++ M RRN EV++ ++ING +NG EEA
Sbjct: 236 PTVITFNTMLDSCFK---AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA 292
Query: 215 WELFGRMPQKNVVAS----TAMITGFCKQGKVDEAWTLFQQIRCRDI----ASWNIMITG 266
G M + + +I G+CKQG D+AW + ++ I +++NI I
Sbjct: 293 RRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICA 352
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
GR ++A L S M PD + + +L + + + +
Sbjct: 353 LCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPS 408
Query: 327 LSVNNALVTMYSKCGSIVDSE-LAFGQTSQ---PDIVSWNTIIAAFAQHVLYYKARSYFD 382
+ N L+ + G++ ++ L T+Q PD++++ T++ F ++ A +D
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 383 QMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRA 442
+M+ G++PDG + + R G D++ L MV P Y +D + +
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Query: 443 GQLQRACEIIR 453
G L +A E R
Sbjct: 529 GNLVKAIEFQR 539
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 8/248 (3%)
Query: 208 NGLYEEAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI----ASWNIM 263
+ +YE E G MP V+ M+ K G ++ ++ +++ R+I ++NI+
Sbjct: 223 SAVYETMIE-HGIMP--TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNIL 279
Query: 264 ITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGF 323
I G+++NG+ EEA M R+G F L L D ++ G
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGI 339
Query: 324 DSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
S N + G I D+ + PD+VS+NT++ + + + +A FD
Sbjct: 340 YPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDD 399
Query: 384 MIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAG 443
+ A + P +T+ +L+ C +G ++ + L M I P Y LV + G
Sbjct: 400 LRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQL-IFPDVITYTTLVKGFVKNG 458
Query: 444 QLQRACEI 451
L A E+
Sbjct: 459 NLSMATEV 466
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 193/441 (43%), Gaps = 30/441 (6%)
Query: 37 VYRANLNIAAFSRAGNITAARQVF----DKMPTKDVVTWNSMLTAYWHSGFPQHSRALFD 92
V+ N ++ +G A +V+ D+ T DV ++ + ++ + P + L +
Sbjct: 111 VFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLN 170
Query: 93 AMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA----SYNAMISGFIKFG 144
M + NVV++ +V G + + E + F M + ++N ++ K G
Sbjct: 171 NMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKG 230
Query: 145 RLCDAQRLF----KEMPCPNVVSYTVMIDGYVKVKEGGGIAR-ARALFDAMPRRNEVSWT 199
+ + ++L K PN+ +Y + I G + E G R L + P+ + +++
Sbjct: 231 DVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYN 290
Query: 200 VMINGLVENGLYEEAWELFGRMPQKNVVAST----AMITGFCKQGKVDEAWTLFQQIR-- 253
+I GL +N ++EA G+M + + + +I G+CK G V A +
Sbjct: 291 NLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFN 350
Query: 254 --CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQG 311
D ++ +I G G AL LF++ + G++P+ +++ +L ++ ++ +
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 312 RQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSE----LAFGQTSQPDIVSWNTIIAA 367
Q + + G ++ N LV K G + D++ + + PDI ++N +I
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 368 FAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPP 427
++ + A D M+ GV PD T+ SLL+ C+ K ++ M + MV G P
Sbjct: 471 YSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK-GCAP 529
Query: 428 RSEHYACLVDVMSRAGQLQRA 448
+ L++ + R +L A
Sbjct: 530 NLFTFNILLESLCRYRKLDEA 550
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 177/421 (42%), Gaps = 62/421 (14%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVV----TWNSMLTAYWH----SGFPQHSRALFDAMP 95
+ + G++ ++ DK+ + V+ T+N + G + L + P
Sbjct: 223 LRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP 282
Query: 96 MKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAMISGFIKFGRLCDAQR 151
+V+++N ++ G +N EA Y M E ++ +YN +I+G+ K G + A+R
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 152 LFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMIN 203
+ + P+ +Y +IDG G RA ALF+ + N + + +I
Sbjct: 343 IVGDAVFNGFVPDQFTYRSLIDGLC---HEGETNRALALFNEALGKGIKPNVILYNTLIK 399
Query: 204 GLVENGLYEEAWELFGRMPQKNVVASTA----MITGFCKQGKVDEAWTLFQQIRCR---- 255
GL G+ EA +L M +K ++ ++ G CK G V +A L + + +
Sbjct: 400 GLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFP 459
Query: 256 DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTY 315
DI ++NI+I GY+ + E AL + M+ G+ PD + SL + + +TY
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 316 ALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYY 375
+++ G P++ ++N ++ + ++
Sbjct: 520 KTMVEKG-------------------------------CAPNLFTFNILLESLCRYRKLD 548
Query: 376 KARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACL 435
+A ++M V PD +TF +L+ C+ G +D + LF M Y + + Y +
Sbjct: 549 EALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNII 608
Query: 436 V 436
+
Sbjct: 609 I 609
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 141/355 (39%), Gaps = 63/355 (17%)
Query: 36 DVYRANLNIAAFSRAGNITAARQ-----VFDKMPTKDVVTWNSMLTAYWHSGFPQHSRAL 90
D Y N IA + + G + A + VF+ D T+ S++ H G + AL
Sbjct: 320 DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGF-VPDQFTYRSLIDGLCHEGETNRALAL 378
Query: 91 FDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFIK 142
F+ K NV+ +N ++ G M+ EA M E+ ++N +++G K
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCK 438
Query: 143 FGRLCDAQRLFKEMPC----PNVVSYTVMIDGY-VKVKEGGGIARARALFDAMPRRNEVS 197
G + DA L K M P++ ++ ++I GY ++K + + D + +
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYT 498
Query: 198 WTVMINGLVENGLYEEAWELFGRMPQK--------------------------------- 224
+ ++NGL + +E+ E + M +K
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMK 558
Query: 225 ------NVVASTAMITGFCKQGKVDEAWTLFQQIR-----CRDIASWNIMITGYAQNGRG 273
+ V +I GFCK G +D A+TLF+++ ++NI+I + +
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNV 618
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLS 328
A LF +MV + PD + + ++ G + ++++GF L+
Sbjct: 619 TMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLT 673
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 9/192 (4%)
Query: 267 YAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSD 326
Y + G+ +EA+N+F +M +P + ++ + DQ + Y + G D
Sbjct: 86 YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPD 145
Query: 327 LSVNNALVTMYSKCG-SIVDSELAF-----GQTSQPDIVSWNTIIAAFAQHVLYYKARSY 380
V + + M S C S + L Q + ++V++ T++ F + +
Sbjct: 146 --VYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYEL 203
Query: 381 FDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMS 440
F +M+A GV TF LL V C+ G + E L + ++ G+ P Y + +
Sbjct: 204 FGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKR-GVLPNLFTYNLFIQGLC 262
Query: 441 RAGQLQRACEII 452
+ G+L A ++
Sbjct: 263 QRGELDGAVRMV 274
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 195/434 (44%), Gaps = 34/434 (7%)
Query: 48 SRAGNITAARQVFDKMPTKDV-VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
SR + + + KM +++ V+ S + +H ++ + KN +++ +V
Sbjct: 135 SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVV 194
Query: 107 AGCVQNDMLDEAFNYFAAMPERN----AASYNAMISGFIKFGRLCDAQRLF-KEMPC--- 158
G + L++A + ++ S+N+++SG+ K G + A+ F + C
Sbjct: 195 DGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV 254
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEA 214
P+V S+ ++I+G V G IA A L M + + V++ ++ G G+ A
Sbjct: 255 PSVYSHNILINGLCLV---GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 215 WELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMIT 265
WE+ M K +V+ T ++ G C+ G +D L + + R I ++M++
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
G + GR +EAL+LF+QM G+ PD + + + L D Y +
Sbjct: 372 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 326 DLSVNNALVT------MYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+ + AL+ M + S++DS ++ G+T DIV +N +I +A+ +A
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGET--LDIVLYNIVIDGYAKSGCIEEALE 489
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F +I G+ P TF SL+ C+ I E+ + + ++ YG+ P Y L+D
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILD-VIKLYGLAPSVVSYTTLMDAY 548
Query: 440 SRAGQLQRACEIIR 453
+ G + E+ R
Sbjct: 549 ANCGNTKSIDELRR 562
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 193/457 (42%), Gaps = 80/457 (17%)
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
VV++NS+++ Y GF +++ F + + +V S N ++ G + EA +
Sbjct: 222 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 124 AMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVK 175
M E ++ +YN + GF G + A + ++M P+V++YT+++ G ++
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL- 340
Query: 176 EGGGIARARALFDAMPRR-----NEVSWTVMINGLVENGLYEEAWELFGRMP----QKNV 226
G I L M R + + +VM++GL + G +EA LF +M ++
Sbjct: 341 --GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQI------------------RCR------------- 255
VA + +I G CK GK D A L+ ++ C+
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Query: 256 --------DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
DI +NI+I GYA++G EEAL LF ++ TG+ P F SL
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD-SELAFGQTSQ---PDIVSWNT 363
+ + R+ ++ +G + L+ Y+ CG+ EL ++ P V+++
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 364 IIAAFAQ--------HVL----YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
I + HVL + K + M + G+ PD IT+ +++ CR +
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 638
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ +M + S Y L+D + G +++A
Sbjct: 639 AFVFLEIM-KSRNLDASSATYNILIDSLCVYGYIRKA 674
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 177/437 (40%), Gaps = 48/437 (10%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAA----RQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
KH D N+ F G I+ A R + DK + DV+T+ +L G
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 86 HSRALFDAM-----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAM 136
L M + +++ + M++G + +DEA + F M + +Y+ +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 137 ISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR 192
I G K G+ A L+ EM PN ++ ++ G + G + AR+L D++
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC---QKGMLLEARSLLDSLIS 461
Query: 193 RNE----VSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTA----MITGFCKQGKVDE 244
E V + ++I+G ++G EEA ELF + + + S A +I G+CK + E
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 245 AWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
A + I+ +A S+ ++ YA G + L +M G+ P ++ + +F
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 581
Query: 301 A---------CASLA---LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC----GSIV 344
C + + ++ +Q + G D N ++ + G+ V
Sbjct: 582 GLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFV 641
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
E+ + ++N +I + + KA S+ + V + +L+ C
Sbjct: 642 FLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHC 701
Query: 405 RAGKIDESMNLFNLMVH 421
G + ++ LF+ ++H
Sbjct: 702 VKGDPEMAVKLFHQLLH 718
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 166/375 (44%), Gaps = 30/375 (8%)
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERN----AASYNAMISGFIKFGRLCDAQRLFKEMP 157
W+ ++ + M+D++ M ++N SYN+++ F + ++ D ++KE+
Sbjct: 127 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIK 183
Query: 158 CPNVVSYTVMIDGYV---KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEA 214
N +Y+ ++DG K+++ R D P + VS+ +++G + G + A
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP--SVVSFNSIMSGYCKLGFVDMA 241
Query: 215 WELF------GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMI 264
F G +P +V + +I G C G + EA L + D ++NI+
Sbjct: 242 KSFFCTVLKCGLVP--SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILA 299
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
G+ G A + M+ G+ PD + + L L +D G ++ GF+
Sbjct: 300 KGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 359
Query: 325 SDLSVN-NALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQHVLYYKARS 379
+ + + +++ K G I ++ F Q PD+V+++ +I + + A
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
+D+M + P+ T +LL C+ G + E+ +L + ++ G Y ++D
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS-GETLDIVLYNIVIDGY 478
Query: 440 SRAGQLQRACEIIRL 454
+++G ++ A E+ ++
Sbjct: 479 AKSGCIEEALELFKV 493
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 136/341 (39%), Gaps = 60/341 (17%)
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
QR FKE+ ++ + +G + E G+ LF + R +V++
Sbjct: 96 GQRRFKELQV--ILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLR-----------MVDD 142
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGK-VDEAWTLFQQIRCRDIASWNIMITGY 267
LY + +M +N+ ST + D+ W ++++I+ ++ +++ ++ G
Sbjct: 143 SLY-----ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGL 197
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+ + E+A+ + P + F S+ + L +D + + V+K G +
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 257
Query: 328 SVNNALVTMYSKCGSIVDS-ELAFGQTS---QPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
+N L+ GSI ++ ELA +PD V++N + F + A
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 317
Query: 384 MIAVGVRPDGITFLSL------------------------------------LSVCCRAG 407
M+ G+ PD IT+ L LS C+ G
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+IDE+++LFN M D G+ P Y+ ++ + + G+ A
Sbjct: 378 RIDEALSLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMA 417
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 195/434 (44%), Gaps = 34/434 (7%)
Query: 48 SRAGNITAARQVFDKMPTKDV-VTWNSMLTAYWHSGFPQHSRALFDAMPMKNVVSWNAMV 106
SR + + + KM +++ V+ S + +H ++ + KN +++ +V
Sbjct: 135 SRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVV 194
Query: 107 AGCVQNDMLDEAFNYFAAMPERN----AASYNAMISGFIKFGRLCDAQRLF-KEMPC--- 158
G + L++A + ++ S+N+++SG+ K G + A+ F + C
Sbjct: 195 DGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV 254
Query: 159 PNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEA 214
P+V S+ ++I+G V G IA A L M + + V++ ++ G G+ A
Sbjct: 255 PSVYSHNILINGLCLV---GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGA 311
Query: 215 WELFGRMPQK----NVVASTAMITGFCKQGKVDEAWTLFQQIRCR-----DIASWNIMIT 265
WE+ M K +V+ T ++ G C+ G +D L + + R I ++M++
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLS 371
Query: 266 GYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDS 325
G + GR +EAL+LF+QM G+ PD + + + L D Y +
Sbjct: 372 GLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILP 431
Query: 326 DLSVNNALVTMYSKCG------SIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARS 379
+ + AL+ + G S++DS ++ G+T DIV +N +I +A+ +A
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGET--LDIVLYNIVIDGYAKSGCIEEALE 489
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
F +I G+ P TF SL+ C+ I E+ + ++ + YG+ P Y L+D
Sbjct: 490 LFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV-IKLYGLAPSVVSYTTLMDAY 548
Query: 440 SRAGQLQRACEIIR 453
+ G + E+ R
Sbjct: 549 ANCGNTKSIDELRR 562
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 193/457 (42%), Gaps = 80/457 (17%)
Query: 68 VVTWNSMLTAYWHSGFPQHSRALFDAMP----MKNVVSWNAMVAGCVQNDMLDEAFNYFA 123
VV++NS+++ Y GF +++ F + + +V S N ++ G + EA +
Sbjct: 222 VVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELAS 281
Query: 124 AMP----ERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVK 175
M E ++ +YN + GF G + A + ++M P+V++YT+++ G ++
Sbjct: 282 DMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL- 340
Query: 176 EGGGIARARALFDAMPRR-----NEVSWTVMINGLVENGLYEEAWELFGRMP----QKNV 226
G I L M R + + +VM++GL + G +EA LF +M ++
Sbjct: 341 --GNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDL 398
Query: 227 VASTAMITGFCKQGKVDEAWTLFQQI------------------RCR------------- 255
VA + +I G CK GK D A L+ ++ C+
Sbjct: 399 VAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDS 458
Query: 256 --------DIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLAL 307
DI +NI+I GYA++G EEAL LF ++ TG+ P F SL
Sbjct: 459 LISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQN 518
Query: 308 LDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVD-SELAFGQTSQ---PDIVSWNT 363
+ + R+ ++ +G + L+ Y+ CG+ EL ++ P V+++
Sbjct: 519 IAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSV 578
Query: 364 IIAAFAQ--------HVL----YYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDE 411
I + HVL + K + M + G+ PD IT+ +++ CR +
Sbjct: 579 IFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG 638
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+ +M + S Y L+D + G +++A
Sbjct: 639 AFVFLEIM-KSRNLDASSATYNILIDSLCVYGYIRKA 674
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/437 (21%), Positives = 177/437 (40%), Gaps = 48/437 (10%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAA----RQVFDKMPTKDVVTWNSMLTAYWHSGFPQ 85
KH D N+ F G I+ A R + DK + DV+T+ +L G
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 86 HSRALFDAM-----PMKNVVSWNAMVAGCVQNDMLDEAFNYFAAMP----ERNAASYNAM 136
L M + +++ + M++G + +DEA + F M + +Y+ +
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 137 ISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPR 192
I G K G+ A L+ EM PN ++ ++ G + G + AR+L D++
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLC---QKGMLLEARSLLDSLIS 461
Query: 193 RNE----VSWTVMINGLVENGLYEEAWELFGRMPQKNVVASTA----MITGFCKQGKVDE 244
E V + ++I+G ++G EEA ELF + + + S A +I G+CK + E
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 245 AWTLFQQIRCRDIA----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFT 300
A + I+ +A S+ ++ YA G + L +M G+ P ++ + +F
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFK 581
Query: 301 A---------CASLA---LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKC----GSIV 344
C + + ++ +Q + G D N ++ + G+ V
Sbjct: 582 GLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFV 641
Query: 345 DSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCC 404
E+ + ++N +I + + KA S+ + V + +L+ C
Sbjct: 642 FLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHC 701
Query: 405 RAGKIDESMNLFNLMVH 421
G + ++ LF+ ++H
Sbjct: 702 VKGDPEMAVKLFHQLLH 718
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 166/375 (44%), Gaps = 30/375 (8%)
Query: 102 WNAMVAGCVQNDMLDEAFNYFAAMPERN----AASYNAMISGFIKFGRLCDAQRLFKEMP 157
W+ ++ + M+D++ M ++N SYN+++ F + ++ D ++KE+
Sbjct: 127 WDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEIK 183
Query: 158 CPNVVSYTVMIDGYV---KVKEGGGIARARALFDAMPRRNEVSWTVMINGLVENGLYEEA 214
N +Y+ ++DG K+++ R D P + VS+ +++G + G + A
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGP--SVVSFNSIMSGYCKLGFVDMA 241
Query: 215 WELF------GRMPQKNVVASTAMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMI 264
F G +P +V + +I G C G + EA L + D ++NI+
Sbjct: 242 KSFFCTVLKCGLVP--SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILA 299
Query: 265 TGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFD 324
G+ G A + M+ G+ PD + + L L +D G ++ GF+
Sbjct: 300 KGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 359
Query: 325 SDLSVN-NALVTMYSKCGSIVDSELAFGQTS----QPDIVSWNTIIAAFAQHVLYYKARS 379
+ + + +++ K G I ++ F Q PD+V+++ +I + + A
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 380 YFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVM 439
+D+M + P+ T +LL C+ G + E+ +L + ++ G Y ++D
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISS-GETLDIVLYNIVIDGY 478
Query: 440 SRAGQLQRACEIIRL 454
+++G ++ A E+ ++
Sbjct: 479 AKSGCIEEALELFKV 493
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 136/341 (39%), Gaps = 60/341 (17%)
Query: 149 AQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMINGLVEN 208
QR FKE+ ++ + +G + E G+ LF + R +V++
Sbjct: 96 GQRRFKELQV--ILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLR-----------MVDD 142
Query: 209 GLYEEAWELFGRMPQKNVVASTAMITGFCKQGK-VDEAWTLFQQIRCRDIASWNIMITGY 267
LY + +M +N+ ST + D+ W ++++I+ ++ +++ ++ G
Sbjct: 143 SLY-----ILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGL 197
Query: 268 AQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDL 327
+ + E+A+ + P + F S+ + L +D + + V+K G +
Sbjct: 198 CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSV 257
Query: 328 SVNNALVTMYSKCGSIVDS-ELAFGQTS---QPDIVSWNTIIAAFAQHVLYYKARSYFDQ 383
+N L+ GSI ++ ELA +PD V++N + F + A
Sbjct: 258 YSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRD 317
Query: 384 MIAVGVRPDGITFLSL------------------------------------LSVCCRAG 407
M+ G+ PD IT+ L LS C+ G
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTG 377
Query: 408 KIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRA 448
+IDE+++LFN M D G+ P Y+ ++ + + G+ A
Sbjct: 378 RIDEALSLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMA 417
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 112/222 (50%), Gaps = 5/222 (2%)
Query: 233 ITGFCKQGKVDEAWTLFQQIRCRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDD 292
+ G CK K +A +F ++ R++ SWN ++T +NG+ F +M+ PD+
Sbjct: 157 LYGTCK--KTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDE 214
Query: 293 LIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQ 352
V L +AC L G+ ++ V+ + + + ALV MY+K G + + L F +
Sbjct: 215 TTMVVLLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFER 272
Query: 353 TSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIA-VGVRPDGITFLSLLSVCCRAGKIDE 411
++ +W+ +I AQ+ +A F +M+ VRP+ +TFL +L C G +D+
Sbjct: 273 MVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDD 332
Query: 412 SMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRACEIIR 453
F+ M + I P HY +VD++ RAG+L A + I+
Sbjct: 333 GYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIK 374
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 102/194 (52%), Gaps = 9/194 (4%)
Query: 258 ASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYAL 317
++WN++ GY+ + E++ ++S+M R G++P+ L F L ACAS L GRQ
Sbjct: 79 STWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVE 138
Query: 318 VIKHGFDSDLSVNNALVTMYSKCGSIVDSELAFGQTSQPDIVSWNTIIAAFAQHVLYYKA 377
V+KHGFD D+ V N L+ +Y C D+ F + ++ ++VSWN+I+ A ++
Sbjct: 139 VLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLV 198
Query: 378 RSYFDQMIAVGVRPDGITFLSLLSVC---CRAGKIDESMNLFNLMVHDYGIPPRSEHYAC 434
F +MI PD T + LLS C GK+ S +MV + + R
Sbjct: 199 FECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHS----QVMVRELELNCRLG--TA 252
Query: 435 LVDVMSRAGQLQRA 448
LVD+ +++G L+ A
Sbjct: 253 LVDMYAKSGGLEYA 266
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 55/291 (18%)
Query: 30 KHFSSYDVYRANLNIAAFSRAGNITAARQVFDKMPTKDVVTWNSMLTAYWHSGFPQHSRA 89
KH +DVY N I + + AR+VFD+M ++VV+WNS++TA
Sbjct: 141 KHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTAL----------- 189
Query: 90 LFDAMPMKNVVSWNAMVAGCVQNDMLDEAFNYFAAM-PERNAASYNAMI------SGFIK 142
V+N L+ F F M +R M+ G +
Sbjct: 190 --------------------VENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLS 229
Query: 143 FGRLCDAQRLFKEMPCPNVVSYTVMIDGYVKVKEGGGIARARALFDAMPRRNEVSWTVMI 202
G+L +Q + +E+ N T ++D Y K GG+ AR +F+ M +N +W+ MI
Sbjct: 230 LGKLVHSQVMVRELEL-NCRLGTALVDMYAK---SGGLEYARLVFERMVDKNVWTWSAMI 285
Query: 203 NGLVENGLYEEAWELFGRMPQK-----NVVASTAMITGFCKQGKVDEAWTLFQQI-RCRD 256
GL + G EEA +LF +M ++ N V ++ G VD+ + F ++ +
Sbjct: 286 VGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHK 345
Query: 257 IA----SWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACA 303
I + M+ + GR EA + +M +PD +++ +L +AC+
Sbjct: 346 IKPMMIHYGAMVDILGRAGRLNEAYDFIKKM---PFEPDAVVWRTLLSACS 393
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 40/229 (17%)
Query: 183 ARALFDAMPRRNEVSWTVMINGLVENGLYEEAWELFGRMPQK------------------ 224
AR +FD M RN VSW ++ LVENG +E F M K
Sbjct: 167 ARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG 226
Query: 225 -------------------NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIASWNIMIT 265
N TA++ + K G ++ A +F+++ +++ +W+ MI
Sbjct: 227 NLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIV 286
Query: 266 GYAQNGRGEEALNLFSQMVR-TGMQPDDLIFVSLFTACASLALLDQGRQTYALVIK-HGF 323
G AQ G EEAL LFS+M++ + ++P+ + F+ + AC+ L+D G + + + K H
Sbjct: 287 GLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKI 346
Query: 324 DSDLSVNNALVTMYSKCGSIVDS-ELAFGQTSQPDIVSWNTIIAAFAQH 371
+ A+V + + G + ++ + +PD V W T+++A + H
Sbjct: 347 KPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIH 395
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/484 (22%), Positives = 206/484 (42%), Gaps = 65/484 (13%)
Query: 34 SYDVYRANLNIAAFSRAGNITAARQVFDKMP----TKDVVTWNSMLTAYWHSGFPQHSRA 89
S DVY I AF + G + A ++F KM +VVT+N+++ G +
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 90 LFDAMPMK----NVVSWNAMVAGCVQNDMLDEAFNYFAAMPER----NAASYNAMISGFI 141
+ M + +++++ +V G + + +A+ M ++ N YN +I FI
Sbjct: 317 FKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 142 KFGRLCDAQRLFKEMPCPNVV----SYTVMIDGYVKVKEGGGIAR--------------- 182
+ G L A + M + +Y +I GY K + R
Sbjct: 377 EAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQG 436
Query: 183 ----------ARALFDAMPR-------RNEVS----WTVMINGLVENGLYEEAWELFGRM 221
+ +FD+ R RN T +I+GL ++G + +A EL+ +
Sbjct: 437 SFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF 496
Query: 222 PQKNVVAST----AMITGFCKQGKVDEAWTLFQQIRCR----DIASWNIMITGYAQNGRG 273
K V T A++ G C+ GK+DEA+ + ++I R D S+N +I+G +
Sbjct: 497 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 556
Query: 274 EEALNLFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNAL 333
+EA +MV+ G++PD+ + L ++ +++ Q + ++G D+ + +
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 334 VTMYSKCGSIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGV 389
+ K + + F + QP+ V +N +I A+ + A + M G+
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 390 RPDGITFLSLLSVCCRAGKIDESMNLFNLMVHDYGIPPRSEHYACLVDVMSRAGQLQRAC 449
P+ T+ SL+ +++E+ LF M + G+ P HY L+D + GQ+ +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVE 735
Query: 450 EIIR 453
++R
Sbjct: 736 CLLR 739
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/422 (21%), Positives = 175/422 (41%), Gaps = 74/422 (17%)
Query: 44 IAAFSRAGNITAARQVFDKMPTKDVV----TWNSMLTAYWHSGFPQHSRALFDAMPM--- 96
I +F AG++ A ++ D M +K + T+N+++ Y +G ++ L M
Sbjct: 372 IDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGF 431
Query: 97 -KNVVSWNAMVAGCVQNDMLDEAFNYFAAMPERNAA------------------------ 131
N S+ +++ + M D A + M RN +
Sbjct: 432 NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALE 491
Query: 132 ---------------SYNAMISGFIKFGRLCDAQRLFKEM---PCP-NVVSYTVMIDGYV 172
+ NA++ G + G+L +A R+ KE+ C + VSY +I G
Sbjct: 492 LWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCC 551
Query: 173 KVKEGGGIARARALFDAMPRR----NEVSWTVMINGLVENGLYEEAWELF------GRMP 222
K+ + A D M +R + +++++I GL EEA + + G +P
Sbjct: 552 GKKK---LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 223 QKNVVASTAMITGFCKQGKVDEAWTLFQQIRCRDIAS----WNIMITGYAQNGRGEEALN 278
+V + MI G CK + +E F ++ +++ +N +I Y ++GR AL
Sbjct: 609 --DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALE 666
Query: 279 LFSQMVRTGMQPDDLIFVSLFTACASLALLDQGRQTYALVIKHGFDSDLSVNNALVTMYS 338
L M G+ P+ + SL + ++ +++ + + + G + ++ AL+ Y
Sbjct: 667 LREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYG 726
Query: 339 KCGSIVDSELAF----GQTSQPDIVSWNTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGI 394
K G +V E + P+ +++ +I +A+ +A ++M G+ PD I
Sbjct: 727 KLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSI 786
Query: 395 TF 396
T+
Sbjct: 787 TY 788
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/389 (20%), Positives = 163/389 (41%), Gaps = 59/389 (15%)
Query: 117 EAFNYFAAMPERNAASYNAMISGFIKFGRLCDAQRLFKEMP----CPNVVSYTVMIDGYV 172
EAF+ + + I+ F K G++ +A +LF +M PNVV++ +IDG
Sbjct: 247 EAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDG-- 304
Query: 173 KVKEGGGIARARALFDAMPRRNE----VSWTVMINGLVENGLYEEAWELFGRMPQK---- 224
+ G A + M R +++++++ GL +A+ + M +K
Sbjct: 305 -LGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363
Query: 225 NVVASTAMITGFCKQGKVDEAWTLFQQIRCRDI----ASWNIMITGYAQNGRGEEALNLF 280
NV+ +I F + G +++A + + + + +++N +I GY +NG+ + A L
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423
Query: 281 SQMVRTGMQPDDLIFVSLFTACASLALLD------------------------------Q 310
+M+ G + F S+ S + D
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483
Query: 311 GRQTYAL-----VIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQTSQPDIVSW 361
G+ + AL + GF D +NAL+ + G + ++ + G+ D VS+
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543
Query: 362 NTIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVH 421
NT+I+ +A + D+M+ G++PD T+ L+ K++E++ ++
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603
Query: 422 DYGIPPRSEHYACLVDVMSRAGQLQRACE 450
+ G+ P Y+ ++D +A + + E
Sbjct: 604 N-GMLPDVYTYSVMIDGCCKAERTEEGQE 631
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 117/269 (43%), Gaps = 12/269 (4%)
Query: 194 NEVSWTVMINGLVENGLYE---EAWELFGRMPQKNVVASTAMITGFCKQGKVDEAWTLFQ 250
++ + +++ LV ++ EA+++ + +V T I FCK GKV+EA LF
Sbjct: 225 SKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFS 284
Query: 251 QIR----CRDIASWNIMITGYAQNGRGEEALNLFSQMVRTGMQPDDLIFVSLFTACASLA 306
++ ++ ++N +I G GR +EA +MV GM+P + + L
Sbjct: 285 KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAK 344
Query: 307 LLDQGRQTYALVIKHGFDSDLSVNNALVTMYSKCGSIVDS----ELAFGQTSQPDIVSWN 362
+ + K GF ++ V N L+ + + GS+ + +L + ++N
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404
Query: 363 TIIAAFAQHVLYYKARSYFDQMIAVGVRPDGITFLSLLSVCCRAGKIDESMNLFNLMVHD 422
T+I + ++ A +M+++G + +F S++ + C D ++ M+
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464
Query: 423 YGIPPRSEHYACLVDVMSRAGQLQRACEI 451
+ P L+ + + G+ +A E+
Sbjct: 465 -NMSPGGGLLTTLISGLCKHGKHSKALEL 492