Miyakogusa Predicted Gene
- Lj0g3v0259429.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0259429.1 tr|A8IE47|A8IE47_CHLRE Lipid-binding START
protein OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_188173,39.52,8e-17,SUBFAMILY NOT NAMED,NULL;
PHOSPHATIDYLCHOLINE TRANSFER PROTEIN,NULL; no description,START-like
domai,CUFF.17095.1
(208 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64720.1 | Symbols: CP5 | Polyketide cyclase/dehydrase and li... 293 6e-80
AT5G54170.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 241 2e-64
AT4G14500.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 215 2e-56
AT3G23080.2 | Symbols: | Polyketide cyclase/dehydrase and lipid... 209 1e-54
AT3G23080.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 208 2e-54
AT3G13062.2 | Symbols: | Polyketide cyclase/dehydrase and lipid... 83 1e-16
AT3G13062.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 83 1e-16
AT3G13062.3 | Symbols: | Polyketide cyclase/dehydrase and lipid... 83 1e-16
AT1G55960.1 | Symbols: | Polyketide cyclase/dehydrase and lipid... 78 4e-15
AT4G14500.2 | Symbols: | Polyketide cyclase/dehydrase and lipid... 50 1e-06
>AT1G64720.1 | Symbols: CP5 | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr1:24046887-24048537
REVERSE LENGTH=385
Length = 385
Score = 293 bits (750), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 137/208 (65%), Positives = 165/208 (79%), Gaps = 6/208 (2%)
Query: 1 MKVQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWC 60
M VQW+RKFPFFC DREYIIGRRIW+ GR +YC+TKG+ PS+P+++KPRRVD+YYSSWC
Sbjct: 183 MVVQWVRKFPFFCSDREYIIGRRIWDAGRVFYCITKGVQYPSVPRQNKPRRVDLYYSSWC 242
Query: 61 IRAVESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEXXX 120
IRAVES RG+G++T+CEVLLFHHE+MGIPWEIAKLGVR+GMWG V+KIEPGLRAYQ
Sbjct: 243 IRAVESKRGDGEMTSCEVLLFHHEDMGIPWEIAKLGVRQGMWGAVKKIEPGLRAYQRAKA 302
Query: 121 XXXXXXXXXFMAQVNTKISPDYLQSIGTTENSSETENAVATDKPQGVNIPKMLVIGGAVA 180
MA +NTK+S + + E S E V DKP G NIPK+LV+GGA+A
Sbjct: 303 AGAGLSPSAIMAHINTKVSAEEFMN----ERGSIAE--VTGDKPTGKNIPKILVVGGAIA 356
Query: 181 LACSLDRGLVTKYVIFGVARRFANLGKR 208
LAC+LD+GL+TK VIFGVARRFA +GKR
Sbjct: 357 LACTLDKGLLTKAVIFGVARRFARMGKR 384
>AT5G54170.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr5:21985056-21987039
REVERSE LENGTH=449
Length = 449
Score = 241 bits (615), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 119/212 (56%), Positives = 150/212 (70%), Gaps = 5/212 (2%)
Query: 1 MKVQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWC 60
M V+WIRKFPFFC DREY+IGRRIW CG SYYCVTKG+ PS+P +K +RVD++YSSWC
Sbjct: 223 MIVRWIRKFPFFCSDREYVIGRRIWNCGNSYYCVTKGVSVPSIPPNNKQKRVDLFYSSWC 282
Query: 61 IRAVESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEXXX 120
IR VES R +G +ACEVLLFHHE+MGIP EIAKLGV++GMWG V+K+EPGLRAYQ
Sbjct: 283 IRPVESRRDDGVTSACEVLLFHHEDMGIPREIAKLGVKRGMWGAVKKMEPGLRAYQTHRL 342
Query: 121 XX--XXXXXXXFMAQVNTKISPDYLQSIGTTENSSETENAVATDK-PQGVNIPKMLVIGG 177
FMAQ+NTKI+ D+L S+ + S TE V ++ + N+ K+L+IGG
Sbjct: 343 SDGGTKLSRSAFMAQINTKITQDHLISL-SNGASPVTETPVTLNQGNRAANLKKLLIIGG 401
Query: 178 AVALACSLDRG-LVTKYVIFGVARRFANLGKR 208
AVA+ CSL G V + G +RF N G++
Sbjct: 402 AVAVVCSLSGGAFVPPAFLLGFGKRFVNGGRK 433
>AT4G14500.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr4:8334391-8337022
FORWARD LENGTH=433
Length = 433
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 137/204 (67%), Gaps = 4/204 (1%)
Query: 1 MKVQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWC 60
M VQW +KFPFFC DREYIIGRRIWE G+ YYCVTKG+ P++PKRDKPRRV++Y+SSW
Sbjct: 231 MIVQWRKKFPFFCSDREYIIGRRIWESGKKYYCVTKGVPYPALPKRDKPRRVELYFSSWV 290
Query: 61 IRAVESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEXXX 120
IRAVES +G+GQ TACEV L H+E+MGIP ++AKLGVR GMWG V+K+ GLRAYQ
Sbjct: 291 IRAVESRKGDGQQTACEVSLVHYEDMGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQSARK 350
Query: 121 XXXXXXXXXFMAQVNTKISPDYLQSIGTTENSSET-ENAVATDKPQGVNIPKMLVIGGAV 179
MA++ TK++ D +S E+ S E A D + + V+ G V
Sbjct: 351 SDSSLSRIAQMARITTKLNMDSAESSSRDEDRSRAMEYARQRDH---LRMDWKWVVVGGV 407
Query: 180 ALACSLDRGLVTKYVIFGVARRFA 203
ALAC L G++ K ++ G +R A
Sbjct: 408 ALACGLHSGIIGKALLAGAGQRLA 431
>AT3G23080.2 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:8207612-8209088
REVERSE LENGTH=388
Length = 388
Score = 209 bits (531), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 3 VQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWCIR 62
V WI+KFPFFC DREYIIGRRIWE GR YY VTKG+ ++ KRDKPRRV++Y+SSW I
Sbjct: 186 VHWIKKFPFFCSDREYIIGRRIWESGRKYYAVTKGVPYKALSKRDKPRRVELYFSSWIIN 245
Query: 63 AVESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEXXXXX 122
AVES +G+GQ+TACEV L H+E+MGIP ++AKLGVR GMWG V+K+ GLRAYQ
Sbjct: 246 AVESRKGDGQMTACEVSLVHYEDMGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQSARKPG 305
Query: 123 XXXXXXXFMAQVNTKISPDYLQSIGT--TENSSETENAVATDKPQGVNIPKMLVIGGAVA 180
MA + TK++ D +++ G E ENA + GV+ K +V+GG VA
Sbjct: 306 TSLSRSAQMASITTKLNMDLVETSGAEDEERGRAVENARKQNDQFGVDW-KWIVVGG-VA 363
Query: 181 LACSLDRGLVTKYVIFGVARRFA 203
LAC L + K ++ G +R A
Sbjct: 364 LACGLHSSAIGKALMVGAGQRLA 386
>AT3G23080.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:8207612-8209181
REVERSE LENGTH=419
Length = 419
Score = 208 bits (530), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 3 VQWIRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWCIR 62
V WI+KFPFFC DREYIIGRRIWE GR YY VTKG+ ++ KRDKPRRV++Y+SSW I
Sbjct: 217 VHWIKKFPFFCSDREYIIGRRIWESGRKYYAVTKGVPYKALSKRDKPRRVELYFSSWIIN 276
Query: 63 AVESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAYQEXXXXX 122
AVES +G+GQ+TACEV L H+E+MGIP ++AKLGVR GMWG V+K+ GLRAYQ
Sbjct: 277 AVESRKGDGQMTACEVSLVHYEDMGIPKDVAKLGVRHGMWGAVKKLNSGLRAYQSARKPG 336
Query: 123 XXXXXXXFMAQVNTKISPDYLQSIGT--TENSSETENAVATDKPQGVNIPKMLVIGGAVA 180
MA + TK++ D +++ G E ENA + GV+ K +V+GG VA
Sbjct: 337 TSLSRSAQMASITTKLNMDLVETSGAEDEERGRAVENARKQNDQFGVDW-KWIVVGG-VA 394
Query: 181 LACSLDRGLVTKYVIFGVARRFA 203
LAC L + K ++ G +R A
Sbjct: 395 LACGLHSSAIGKALMVGAGQRLA 417
>AT3G13062.2 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:4184777-4187268
FORWARD LENGTH=440
Length = 440
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 6 IRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWCIRAVE 65
I+KFP REY++ ++WE +YC K D +P++ K RV + S W IR V
Sbjct: 185 IKKFPLLTP-REYVLAWKLWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVP 243
Query: 66 SNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAY--QEXXXXXX 123
ACE+ + H E+ G+ E+AKL +G+W V K+E LR Y
Sbjct: 244 GR------NACEIHMVHQEDAGLNVEMAKLAFSRGIWSYVCKMENALRKYIATSHRPQGP 297
Query: 124 XXXXXXFMAQVNTKI---SPDYLQSIGTTENSSETENAVATD----KPQGVNIPK-MLVI 175
M ++ +++ + D S GTT + T KP I ML++
Sbjct: 298 TLSAVSLMKKIPSELESQTDDITNSSGTTTSGMHTGEGAKRKKLLRKPSKKLIANGMLLV 357
Query: 176 GGAVALACSLDRG 188
GGAV A L RG
Sbjct: 358 GGAVGGAICLSRG 370
>AT3G13062.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:4184777-4186795
FORWARD LENGTH=403
Length = 403
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 6 IRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWCIRAVE 65
I+KFP REY++ ++WE +YC K D +P++ K RV + S W IR V
Sbjct: 185 IKKFPLLTP-REYVLAWKLWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVP 243
Query: 66 SNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAY--QEXXXXXX 123
ACE+ + H E+ G+ E+AKL +G+W V K+E LR Y
Sbjct: 244 GR------NACEIHMVHQEDAGLNVEMAKLAFSRGIWSYVCKMENALRKYIATSHRPQGP 297
Query: 124 XXXXXXFMAQVNTKI---SPDYLQSIGTTENSSETENAVATD----KPQGVNIPK-MLVI 175
M ++ +++ + D S GTT + T KP I ML++
Sbjct: 298 TLSAVSLMKKIPSELESQTDDITNSSGTTTSGMHTGEGAKRKKLLRKPSKKLIANGMLLV 357
Query: 176 GGAVALACSLDRG 188
GGAV A L RG
Sbjct: 358 GGAVGGAICLSRG 370
>AT3G13062.3 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr3:4184777-4186795
FORWARD LENGTH=411
Length = 411
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Query: 6 IRKFPFFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWCIRAVE 65
I+KFP REY++ ++WE +YC K D +P++ K RV + S W IR V
Sbjct: 193 IKKFPLLTP-REYVLAWKLWEGKDKFYCFIKECDHNMVPQQRKYVRVSYFRSGWRIRKVP 251
Query: 66 SNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAY--QEXXXXXX 123
ACE+ + H E+ G+ E+AKL +G+W V K+E LR Y
Sbjct: 252 GR------NACEIHMVHQEDAGLNVEMAKLAFSRGIWSYVCKMENALRKYIATSHRPQGP 305
Query: 124 XXXXXXFMAQVNTKI---SPDYLQSIGTTENSSETENAVATD----KPQGVNIPK-MLVI 175
M ++ +++ + D S GTT + T KP I ML++
Sbjct: 306 TLSAVSLMKKIPSELESQTDDITNSSGTTTSGMHTGEGAKRKKLLRKPSKKLIANGMLLV 365
Query: 176 GGAVALACSLDRG 188
GGAV A L RG
Sbjct: 366 GGAVGGAICLSRG 378
>AT1G55960.1 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr1:20927962-20929825
REVERSE LENGTH=403
Length = 403
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 6 IRKFPFFCKDREYIIGRRIWECG-RSYYCVTKGIDCPSMPKRDKPRRVDVYYSSWCIRAV 64
I+KFP REY++ R+W+ + +YC TK D +P++ K RV + S W IR V
Sbjct: 186 IKKFPLLT-SREYVLAWRLWQGKEKKFYCFTKECDHNMVPQQRKYVRVSYFRSGWRIRQV 244
Query: 65 ESNRGNGQLTACEVLLFHHEEMGIPWEIAKLGVRKGMWGMVQKIEPGLRAY--QEXXXXX 122
ACE+ +FH E G+ E+AKL KG+W V K+E L Y
Sbjct: 245 PGR------NACEIKMFHQENAGLNVEMAKLAFSKGIWSYVCKMENALCKYIATSHRTQG 298
Query: 123 XXXXXXXFMAQVNTKISPDYLQSIGTTENSSET---ENAVATDKPQGVNIPK-------M 172
M +V +++ G+ E SS + VA + + + P +
Sbjct: 299 PILSAVTLMKEVPSELETGTDNVTGSMETSSGEGVLSHVVAAKQKKKMRKPSTKLIAKGL 358
Query: 173 LVIGGAVALA---CSLDRGLVTKYVIFGVARRFANLGK 207
+++GGA+ L+ +L + Y++ + +R +L +
Sbjct: 359 VLVGGAICLSRGPSALGAKVALAYLLTKLNKRGTSLNQ 396
>AT4G14500.2 | Symbols: | Polyketide cyclase/dehydrase and lipid
transport superfamily protein | chr4:8334391-8336468
FORWARD LENGTH=294
Length = 294
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 1 MKVQWIRKFP---FFCKDREYIIGRRIWECGRSYYCVTKGIDCPSMPK 45
M VQW +K C DREYIIGRRIWE G+ YYCVTK PK
Sbjct: 231 MIVQWRKKVSGLLILC-DREYIIGRRIWESGKKYYCVTKNSVGDKTPK 277