Miyakogusa Predicted Gene
- Lj0g3v0259349.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0259349.1 Non Chatacterized Hit- tr|B4FQR1|B4FQR1_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,45.28,4e-19,zf-RING_2,Zinc finger, RING-type; RING/U-box,NULL;
seg,NULL; no description,Zinc finger, RING/FYVE/P,CUFF.17081.1
(199 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 93 1e-19
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 75 3e-14
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 68 3e-12
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 68 3e-12
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 6e-09
AT5G42940.1 | Symbols: | RING/U-box superfamily protein | chr5:... 57 6e-09
AT4G34040.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 8e-09
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 57 9e-09
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 57 9e-09
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 57 9e-09
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 1e-08
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 1e-08
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 56 1e-08
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 2e-08
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 2e-08
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 55 3e-08
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 3e-08
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 54 1e-07
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 53 1e-07
AT2G15530.4 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-07
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 2e-07
AT2G37150.3 | Symbols: | RING/U-box superfamily protein | chr2:... 52 2e-07
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 3e-07
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 52 3e-07
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 3e-07
AT2G37150.2 | Symbols: | RING/U-box superfamily protein | chr2:... 52 3e-07
AT2G37150.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 3e-07
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 52 4e-07
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 5e-07
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 5e-07
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 51 6e-07
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 6e-07
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 6e-07
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 8e-07
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 8e-07
AT1G45180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 9e-07
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT5G67120.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 1e-06
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 2e-06
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 49 2e-06
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 49 2e-06
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 2e-06
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 49 2e-06
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 49 2e-06
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 49 3e-06
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 49 3e-06
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 49 3e-06
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 4e-06
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 6e-06
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 6e-06
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 47 6e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 47 6e-06
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 6e-06
AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein | ch... 47 7e-06
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 7e-06
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 47 7e-06
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 47 7e-06
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 47 9e-06
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 47 9e-06
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 47 9e-06
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Query: 99 LSYXXXXXXXXXXXXXKRGLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEAL 158
LSY RGL+ EIS+CL+ T+ + +K+ I+RCV+CQ+E+EE E+L
Sbjct: 117 LSYEELIALGDFIGVENRGLTPIEISTCLNASTYVFSHNKNEIDRCVVCQMEFEE-RESL 175
Query: 159 VALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTS 193
V L C+HPYH +CI+KWL+ KK+CPIC +E S S
Sbjct: 176 VVLRPCDHPYHSECITKWLETKKICPICCSEPSVS 210
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 99 LSYXXXXXXXXXXXXXKRGLSENEISSCLHPYTFQSAESKSGI-ERCVICQVEYEEGEEA 157
LSY RGLS + I+S L ++ ++++G E CVIC+++YE+ E+
Sbjct: 243 LSYEELLALGDIVGTESRGLSADTIAS-LPSKRYKEGDNQNGTNESCVICRLDYEDDEDL 301
Query: 158 LVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTS 193
+ L C+H YH +CI+ WL+I KVCP+CS EVSTS
Sbjct: 302 I--LLPCKHSYHSECINNWLKINKVCPVCSAEVSTS 335
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 116 RGLSENEISSC-LHPYTFQSAES-KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCI 173
RGLS+ I + Y F S S K ERCVICQ++Y+ GE + C+H YH +CI
Sbjct: 167 RGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNL--PCKHVYHSECI 224
Query: 174 SKWLQIKKVCPICSNEV 190
SKWL I KVCP+C++EV
Sbjct: 225 SKWLSINKVCPVCNSEV 241
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 116 RGLSENEISSC-LHPYTFQSAES-KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCI 173
RGLS+ I + Y F S S K ERCVICQ++Y+ GE + C+H YH +CI
Sbjct: 167 RGLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNL--PCKHVYHSECI 224
Query: 174 SKWLQIKKVCPICSNEV 190
SKWL I KVCP+C++EV
Sbjct: 225 SKWLSINKVCPVCNSEV 241
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKW 176
GL+E +I SCL ++ +C+ICQ EYE +E V +C H +H DC+++W
Sbjct: 292 GLTEKQIKSCLRKVKPCRQDTTVADRKCIICQDEYEAKDE--VGELRCGHRFHIDCVNQW 349
Query: 177 LQIKKVCPIC 186
L K CP+C
Sbjct: 350 LVRKNSCPVC 359
>AT5G42940.1 | Symbols: | RING/U-box superfamily protein |
chr5:17216649-17219171 REVERSE LENGTH=691
Length = 691
Score = 57.4 bits (137), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 117 GLSENEISSCLHPYTFQS-AESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
G++E IS+ L ++S +S E C +CQ EY EGE+ + +C H +H CI +
Sbjct: 609 GVNEETISNRLKQRKYKSNTKSPQDAEPCCVCQEEYTEGED--MGTLECGHEFHSQCIKE 666
Query: 176 WLQIKKVCPIC 186
WL+ K +CPIC
Sbjct: 667 WLKQKNLCPIC 677
>AT4G34040.1 | Symbols: | RING/U-box superfamily protein |
chr4:16304638-16307503 REVERSE LENGTH=666
Length = 666
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 4/72 (5%)
Query: 117 GLSENEISSCL--HPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
GLSE I + H +T +A S +E C +CQ EY EG++ + C H +H C+
Sbjct: 590 GLSEEVILKVMKQHKHTSSAAGSHQDMEPCCVCQEEYAEGDD--LGTLGCGHEFHTACVK 647
Query: 175 KWLQIKKVCPIC 186
+WL +K +CPIC
Sbjct: 648 QWLMLKNLCPIC 659
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 117 GLSENEISSCL--HPYTFQSAES---KSGIERCVICQVEYEEGEEALVALDQCEHPYHGD 171
GLSE I + H +T S S IE C ICQ EY EG+ + +C H +H D
Sbjct: 624 GLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDN--LGTLKCGHEFHKD 681
Query: 172 CISKWLQIKKVCPICSNEV 190
CI +W+ IK +CPIC E
Sbjct: 682 CIKQWVMIKNLCPICKTEA 700
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 117 GLSENEISSCL--HPYTFQSAES---KSGIERCVICQVEYEEGEEALVALDQCEHPYHGD 171
GLSE I + H +T S S IE C ICQ EY EG+ + +C H +H D
Sbjct: 624 GLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDN--LGTLKCGHEFHKD 681
Query: 172 CISKWLQIKKVCPICSNEV 190
CI +W+ IK +CPIC E
Sbjct: 682 CIKQWVMIKNLCPICKTEA 700
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 117 GLSENEISSCL--HPYTFQSAES---KSGIERCVICQVEYEEGEEALVALDQCEHPYHGD 171
GLSE I + H +T S S IE C ICQ EY EG+ + +C H +H D
Sbjct: 624 GLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDN--LGTLKCGHEFHKD 681
Query: 172 CISKWLQIKKVCPICSNEV 190
CI +W+ IK +CPIC E
Sbjct: 682 CIKQWVMIKNLCPICKTEA 700
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 120 ENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQI 179
+++I +H F+ + K G+E C +C + +G++A V L +C H +H DCI W Q
Sbjct: 97 DSKILQSIHVVVFKCTDFKDGLE-CAVCLSDLVDGDKARV-LPRCNHGFHVDCIDMWFQS 154
Query: 180 KKVCPICSNEVST 192
CP+C N V +
Sbjct: 155 HSTCPLCRNTVGS 167
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
C IC +Y EG ++VA C+H +HGDCI+KWLQ+ +CP+C + +
Sbjct: 183 CAICMEDYIEGS-SIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSI 228
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 116 RGLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
RGL N I S L +TF K IE C +C E+EE E V L C+H +H DCI
Sbjct: 93 RGLDPNVIKS-LPVFTFSDETHKDPIE-CAVCLSEFEESETGRV-LPNCQHTFHVDCIDM 149
Query: 176 WLQIKKVCPICSNEV 190
W CP+C + V
Sbjct: 150 WFHSHSTCPLCRSLV 164
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKW 176
GL+++ I+ CLH TF SAE KS + C IC + +G + L++L C H +H C++ W
Sbjct: 177 GLTQDAIN-CLHRQTFSSAEVKSEMRDCSICLESFTKG-DMLISL-PCTHSFHSSCLNPW 233
Query: 177 LQIKKVCPICSNEVS 191
L+ CP C ++
Sbjct: 234 LRACGDCPCCRRAIA 248
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 118 LSENEISSCLHPYTFQ-----------SAESKSGIERCVICQVEYEEGEEALVALDQCEH 166
L+E IS CL +Q S +C ICQ EY G+E V CEH
Sbjct: 411 LTEEAISKCLKTSIYQMKPLSYGSITKSPSDNKEDAKCSICQEEYTIGDE--VGRLHCEH 468
Query: 167 PYHGDCISKWLQIKKVCPICSNEVSTSN 194
YH C+ +WL+IK CPIC TS+
Sbjct: 469 TYHVKCVQEWLRIKSWCPICKATAETSS 496
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 115 KRGLSENEISSCLHPYTFQSAESKSG------IERCVICQVEYEEGEEALVALDQCEHPY 168
K GLS ++ L T + G + C ICQ Y+ E+ + LD C H Y
Sbjct: 393 KTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDSCTICQENYKN-EDKIATLD-CMHKY 450
Query: 169 HGDCISKWLQIKKVCPICSNEV 190
H +C+ KWL IK VCPIC +E
Sbjct: 451 HAECLKKWLVIKNVCPICKSEA 472
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 115 KRGLSENEISSCLHPYTFQSAESKSG------IERCVICQVEYEEGEEALVALDQCEHPY 168
K GLS ++ L T + G + C ICQ Y+ E+ + LD C H Y
Sbjct: 393 KTGLSSEDVKELLKRRTSTRINLEEGPSTDLETDSCTICQENYKN-EDKIATLD-CMHKY 450
Query: 169 HGDCISKWLQIKKVCPICSNEV 190
H +C+ KWL IK VCPIC +E
Sbjct: 451 HAECLKKWLVIKNVCPICKSEA 472
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 141 IERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
E C ICQ ++ EE + LD C H YH +C+ KWL +K VCPIC +E
Sbjct: 439 TEPCTICQESFKN-EEKIATLD-CGHEYHAECLEKWLIVKNVCPICKSEA 486
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 141 IERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
E C ICQ ++ EE + LD C H YH +C+ KWL +K VCPIC +E
Sbjct: 439 TEPCTICQESFKN-EEKIATLD-CGHEYHAECLEKWLIVKNVCPICKSEA 486
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 117 GLSENEISSCLHPYTFQSAES-KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
GL+ E+SS P F +S K G+E C IC E +G++A + L +C H +H +CI
Sbjct: 102 GLTSFELSSL--PIVFFRQDSCKDGLE-CSICLSELVKGDKARL-LPKCNHSFHVECIDM 157
Query: 176 WLQIKKVCPICSNEV 190
W Q CPIC N V
Sbjct: 158 WFQSHSTCPICRNTV 172
>AT2G15530.4 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777899 FORWARD LENGTH=780
Length = 780
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 117 GLSENEISSCL--HPYTFQSAES---KSGIERCVICQVEYEEGEEALVALDQCEHPYHGD 171
GLSE I + H +T S S IE C ICQ EY EG+ + +C H +H D
Sbjct: 624 GLSEEVILKAMKQHKHTSSSPSSVELHQNIEPCCICQEEYVEGDN--LGTLKCGHEFHKD 681
Query: 172 CISKWLQIKKVCPI 185
CI +W+ IK +CPI
Sbjct: 682 CIKQWVMIKNLCPI 695
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 136 ESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSNM 195
E K G+E C IC +E+EE L L C H +H +CI +WL+ K CP+C + N
Sbjct: 107 EDKYGLE-CAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLD-PNA 164
Query: 196 PSN 198
P N
Sbjct: 165 PEN 167
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNE 189
C IC EYE +E L + QC+H +H DCI +WL++ CP+C N
Sbjct: 330 CAICLSEYEP-KETLRTIPQCQHCFHADCIDEWLKLNGTCPVCRNS 374
>AT2G37150.3 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15607600 REVERSE LENGTH=599
Length = 599
Score = 52.4 bits (124), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKW 176
GLS++ ISSCL + + +C IC EY+E EE + C H YHG CI KW
Sbjct: 518 GLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYKEKEEL-GEVKGCGHDYHGRCIKKW 576
Query: 177 LQIKKVCPICSN 188
L +K CPIC +
Sbjct: 577 LSMKNSCPICKS 588
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 115 KRGLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
+RGL + S L Y + A +K E CVIC ++EEGE V + C H +H DC+
Sbjct: 113 RRGLDSQAVRS-LPVYRYTKA-AKQRNEDCVICLSDFEEGETVKV-IPHCGHVFHVDCVD 169
Query: 175 KWLQIKKVCPIC-SNEV 190
WL CP+C SN++
Sbjct: 170 TWLSSYVTCPLCRSNQL 186
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 118 LSENEISSCLHPYTFQSAESKSGIE-------RCVICQVEYEEGEEALVALDQCEHPYHG 170
LSE +S L +Q + I +C ICQ EY +G+E + C+H YH
Sbjct: 442 LSEEALSRSLKQSIYQETDETGSISLYKDDDIKCSICQEEYVDGDE--LGTIPCQHMYHV 499
Query: 171 DCISKWLQIKKVCPIC 186
C+ +WL++K CPIC
Sbjct: 500 SCVQQWLRMKNWCPIC 515
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 118 LSENEISSCLHPYTFQSAESKSGIE-------RCVICQVEYEEGEEALVALDQCEHPYHG 170
LSE +S L +Q + I +C ICQ EY +G+E + C+H YH
Sbjct: 442 LSEEALSRSLKQSIYQETDETGSISLYKDDDIKCSICQEEYVDGDE--LGTIPCQHMYHV 499
Query: 171 DCISKWLQIKKVCPIC 186
C+ +WL++K CPIC
Sbjct: 500 SCVQQWLRMKNWCPIC 515
>AT2G37150.2 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKW 176
GLS++ ISSCL + + +C IC EY+E +E L + C H YHG CI KW
Sbjct: 465 GLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYKE-KEELGEVKGCGHDYHGRCIKKW 523
Query: 177 LQIKKVCPIC 186
L +K CPIC
Sbjct: 524 LSMKNSCPIC 533
>AT2G37150.1 | Symbols: | RING/U-box superfamily protein |
chr2:15603748-15605988 REVERSE LENGTH=546
Length = 546
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKW 176
GLS++ ISSCL + + +C IC EY+E +E L + C H YHG CI KW
Sbjct: 465 GLSDSAISSCLLATMYYPSYQTEEQRKCAICLEEYKE-KEELGEVKGCGHDYHGRCIKKW 523
Query: 177 LQIKKVCPIC 186
L +K CPIC
Sbjct: 524 LSMKNSCPIC 533
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Query: 116 RGLSENEISSCLHPYTFQSAESKSGIER-------CVICQVEYEEGEEALVALDQCEHPY 168
+GL + + S L TF +AES SG C IC ++ +GEE V L C H +
Sbjct: 68 KGLKKKALQS-LPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRV-LPLCGHSF 125
Query: 169 HGDCISKWLQIKKVCPIC 186
H +CI KWL + CP C
Sbjct: 126 HVECIDKWLVSRSSCPSC 143
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKW 176
GL+E+ I S + Y ++S + C +C E+EE E+L L +C H +H CI W
Sbjct: 116 GLNESMIKS-ITVYKYKSGDGFVDGSDCSVCLSEFEE-NESLRLLPKCNHAFHLPCIDTW 173
Query: 177 LQIKKVCPICSNEVSTSNMPS 197
L+ CP+C V+ N P+
Sbjct: 174 LKSHSNCPLCRAFVTGVNNPT 194
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 130 YTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNE 189
+ + SA K+ C IC E+ + E+ + + C HP+H +CI W ++ K CP+C E
Sbjct: 89 FHYSSATKKNHGTECAICLSEFSD-EDTVRLITVCRHPFHSNCIDLWFELHKTCPVCRCE 147
Query: 190 V 190
+
Sbjct: 148 L 148
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 143 RCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPIC 186
+C ICQ EY +G+E V C+H YH C +WL++K CPIC
Sbjct: 467 KCSICQEEYVDGDE--VGTLPCQHKYHVSCAQQWLRMKNWCPIC 508
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 143 RCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPIC 186
+C ICQ EY +G+E V C+H YH C +WL++K CPIC
Sbjct: 467 KCSICQEEYVDGDE--VGTLPCQHKYHVSCAQQWLRMKNWCPIC 508
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 115 KRGLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
K+GLS++ I + Y ++KS C IC ++EEGE L +C H +H +CI
Sbjct: 145 KKGLSKSSIQNIPMFYNRSEHQTKSS---CSICLQDWEEGEVGR-KLARCGHTFHMNCID 200
Query: 175 KWLQIKKVCPICSNEVS 191
+WL ++ CPIC + +S
Sbjct: 201 EWLLRQETCPICRDHLS 217
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIER-CVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
GL E+EI CL + + S + ++R C ICQ EYE +E V C H +H C+ +
Sbjct: 294 GLKESEIHRCLG--KIKPSVSHTLVDRKCSICQDEYEREDE--VGELNCGHSFHVHCVKQ 349
Query: 176 WLQIKKVCPIC 186
WL K CP+C
Sbjct: 350 WLSRKNACPVC 360
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSNMPSN 198
C IC Y G++ V C H +H DC+ KWL+I CP+C NEV S+ S+
Sbjct: 355 CCICLTRY--GDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEVGESSSASS 407
>AT1G45180.1 | Symbols: | RING/U-box superfamily protein |
chr1:17099335-17101683 FORWARD LENGTH=645
Length = 645
Score = 50.1 bits (118), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 117 GLSENEISSCLHPYTFQSA-ESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
GL+E IS+ L ++S+ S +E C +CQ E EE + +C H +H CI +
Sbjct: 564 GLNEETISNRLKQQKYKSSTRSSQEVEPCCVCQEE--YKEEEEIGRLECGHDFHSQCIKE 621
Query: 176 WLQIKKVCPIC-SNEVSTSNMP 196
WL+ K +CPIC + ++T+N P
Sbjct: 622 WLKQKNLCPICKTTGLNTANKP 643
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 138 KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSN 194
KS + +C +C E+E+G + V C+H +H DC+ WL++ CP+C E+ T +
Sbjct: 210 KSEMNQCAVCMDEFEDGSD--VKQMPCKHVFHQDCLLPWLELHNSCPVCRFELPTDD 264
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 143 RCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
+C IC +EY +G++ + C+H YH DCIS+WL+ KVC IC EV
Sbjct: 233 QCSICLMEYAKGDK--ITTLPCKHIYHKDCISQWLKQNKVCCICKAEV 278
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 117 GLSENEISSCLHPYTFQSAESKSGIE--RCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
GL+E +IS + + K +E C+IC +Y G++ + C H YH DCIS
Sbjct: 165 GLTEGQISQ------LPTIKFKPSLEDKMCMICHSDYVRGDKLTIL--PCTHKYHKDCIS 216
Query: 175 KWLQIKKVCPICSNEV 190
WLQ K+C +C EV
Sbjct: 217 HWLQNSKLCCVCQREV 232
>AT5G67120.1 | Symbols: | RING/U-box superfamily protein |
chr5:26787830-26789737 REVERSE LENGTH=272
Length = 272
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 115 KRGLSENEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCIS 174
+ GLSE I L ++ S +RCVICQ + ++ EE V+ C H +H CI
Sbjct: 199 RTGLSEEVIDENLIRRKYE-KRSDDETKRCVICQQKLKDNEE--VSKLGCGHDFHFGCIK 255
Query: 175 KWLQIKKVCPICSNEV 190
WL + CP+C+ EV
Sbjct: 256 NWLMVTNKCPLCNREV 271
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 138 KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSNMPS 197
G+E C IC E+E+ EE L + C H +H +CI +WL + CP+C +S + S
Sbjct: 115 NGGVE-CAICLCEFED-EEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSLKSGDS 172
Query: 198 NP 199
P
Sbjct: 173 FP 174
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 116 RGLSE---NEISSCLHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDC 172
RGL + N S L+ K G+E C IC E+E+ EE L + C H +H C
Sbjct: 98 RGLGKDVINSFPSFLYSQVKGLKIGKGGVE-CAICLNEFED-EETLRLMPPCSHAFHASC 155
Query: 173 ISKWLQIKKVCPIC 186
I WL + CP+C
Sbjct: 156 IDVWLSSRSTCPVC 169
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
C IC E+E+GE V L++C+H +H CI KWL + CP C +
Sbjct: 107 CAICLSEFEQGESIQV-LEKCQHGFHVKCIHKWLSTRSSCPTCRTSI 152
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 130 YTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNE 189
+ + +S +E C +C E+EE +E V L +C H +H DCI W + + CP+C
Sbjct: 99 FVYSVKTHESPLEECSVCLSEFEEDDEGRV-LPKCGHVFHVDCIDTWFRSRSSCPLCRAP 157
Query: 190 VSTSNMPSNP 199
V + + P
Sbjct: 158 VQPAQPVTEP 167
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 130 YTF-QSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWL-QIKKVCPICS 187
+TF SA K+G E C IC +Y GE + L C+H +H +CI WL + CP+C
Sbjct: 218 FTFTDSAHHKAG-ETCAICLEDYRFGES--LRLLPCQHAFHLNCIDSWLTKWGTSCPVCK 274
Query: 188 NEVSTSNMPS 197
+++ T M S
Sbjct: 275 HDIRTETMSS 284
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 115 KRGLSENEISSCLHPYTFQSA-ESKSGIE--RCVICQVEYEEGEEALVALDQCEHPYHGD 171
+RG +N + + + S ESK G + C IC E E+ E + L C H +H D
Sbjct: 92 RRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELED-HETVRLLPICNHLFHID 150
Query: 172 CISKWLQIKKVCPIC-SNEVSTSNMPSN 198
CI WL CP+C SN + SN P +
Sbjct: 151 CIDTWLYSHATCPVCRSNLTAKSNKPGD 178
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 130 YTF-QSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWL-QIKKVCPICS 187
+TF SA K+G E C IC +Y GE + L C+H +H +CI WL + CP+C
Sbjct: 218 FTFTDSAHHKAG-ETCAICLEDYRFGES--LRLLPCQHAFHLNCIDSWLTKWGTSCPVCK 274
Query: 188 NEVSTSNMPS 197
+++ T M S
Sbjct: 275 HDIRTETMSS 284
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 132 FQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVS 191
F + + K +E CV+C E +G++A V L C+H +H +CI WLQ CPIC V
Sbjct: 77 FNTKDFKYVLE-CVVCLSELADGDKARV-LPSCDHWFHVECIDSWLQSNSTCPICRKRVC 134
Query: 192 TSNMPSNP 199
+ P
Sbjct: 135 LKQSRTRP 142
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 138 KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSNMPS 197
+S C +C+ E+E G EA C H YH DCI WL CP+C E+ +++ PS
Sbjct: 184 RSSDSNCPVCKDEFELGSEAKQM--PCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPS 241
Query: 198 N 198
+
Sbjct: 242 S 242
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 138 KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSNMPS 197
+S C +C+ E+E G EA C H YH DCI WL CP+C E+ +++ PS
Sbjct: 184 RSSDSNCPVCKDEFELGSEAKQM--PCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPS 241
Query: 198 N 198
+
Sbjct: 242 S 242
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 138 KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSNMPS 197
+S C +C+ E+E G EA C H YH DCI WL CP+C E+ +++ PS
Sbjct: 184 RSSDSNCPVCKDEFELGSEAKQM--PCNHIYHSDCIVPWLVQHNSCPVCRQELPSASGPS 241
Query: 198 N 198
+
Sbjct: 242 S 242
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSNMPSN 198
C IC+ E+E GEE +C H YH CI WL I CPIC EV+ SN
Sbjct: 138 CAICKEEFEVGEEGKEL--KCLHLYHSSCIVSWLNIHNTCPICRFEVNLGVSESN 190
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 134 SAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTS 193
+AE K C IC + EGE+ + + C H +H DCI WL K CP+C E+
Sbjct: 60 AAEEKHSSPYCTICLEDAAEGEK-MRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPPV 118
Query: 194 NMPSNP 199
P NP
Sbjct: 119 P-PGNP 123
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 134 SAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTS 193
+AE K C IC EGE+ + + C H +H DCI WL+ K +CP+C E+
Sbjct: 60 TAEEKHSSPYCTICLENATEGEK-MRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPPV 118
Query: 194 NMPSNP 199
P NP
Sbjct: 119 P-PGNP 123
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 132 FQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVS 191
F A S +G CVIC+ E EG + V C+H +H CI WL K CP C ++
Sbjct: 202 FNVAASNAGEVECVICKEEMSEGRD--VCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLP 259
Query: 192 TSNMPS 197
T ++ S
Sbjct: 260 TDDVFS 265
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 131 TFQSAESKS-----GIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPI 185
TF +E K+ G C IC E+E+ +E L L +C+H +H CI WLQ CP+
Sbjct: 106 TFVYSEVKTQKIGKGALECAICLNEFED-DETLRLLPKCDHVFHPHCIGAWLQGHVTCPV 164
Query: 186 CSNEVS 191
C ++
Sbjct: 165 CRTNLA 170
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSN 194
C IC YE+G E LV+L C H +H CI KWL++ CP+C + N
Sbjct: 292 CCICLSSYEDGAE-LVSL-PCNHHFHSTCIVKWLKMNATCPLCKFNILKGN 340
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 130 YTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQ-IKKVCPICSN 188
YT +E S +C IC VEYEE + + C H +H C+ KWL+ I +VCP+C
Sbjct: 479 YTKSQSEDPS---QCYICLVEYEEADS--IRTLPCHHEFHKTCVDKWLKEIHRVCPLCRG 533
Query: 189 EV 190
++
Sbjct: 534 DI 535
>AT1G70910.1 | Symbols: DEP | RING/U-box superfamily protein |
chr1:26734155-26734640 FORWARD LENGTH=161
Length = 161
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 127 LHPYTFQSAESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPIC 186
L P F+ + +E C +C +E E+ L + C H +HGDCI KWL CP+C
Sbjct: 101 LTPQIFEEPD----METCGLCLLE----EQHLFDMPNCAHVFHGDCIDKWLSTSNNCPLC 152
Query: 187 SNEV 190
E+
Sbjct: 153 GVEI 156
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 115 KRGLSENEISSCLHPYTFQSAES----KSGIERCVICQVEYEEGEEALVALDQCEHPYHG 170
+RGL E E+ + + + K G+E C IC E+E+ +E L + C H +H
Sbjct: 92 RRGL-EKEVIESFPTFLYSEVKGLKIGKGGVE-CAICLSEFED-QETLRWMPPCSHTFHA 148
Query: 171 DCISKWLQIKKVCPICSNEVSTSNMPSNP 199
+CI WL CP+C +S S P
Sbjct: 149 NCIDVWLSSWSTCPVCRANLSLKPGESYP 177
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVSTSNMPSNP 199
C +C +E G E C+H +HGDCI WL I+ CP+C E +PS+P
Sbjct: 215 CAVCTEVFEAGIEGREM--PCKHIFHGDCIVPWLSIRNSCPVCRFE-----LPSDP 263
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 117 GLSENEISSCLHPYTFQSAES-KSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISK 175
GL + I S L + F + + K G+E C +C ++E+ E L L +C H +H CI +
Sbjct: 98 GLDKKAIES-LPFFRFSALKGLKQGLE-CSVCLSKFED-VEILRLLPKCRHAFHIGCIDQ 154
Query: 176 WLQIKKVCPICSNEVS 191
WL+ CP+C N V+
Sbjct: 155 WLEQHATCPLCRNRVN 170
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 136 ESKSGIERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEV 190
E K G+E C IC +E++ G+ L L C H +H +CI W + + CP+C ++
Sbjct: 103 EEKYGLE-CAICLLEFD-GDHVLRLLTTCYHVFHQECIDLWFESHRTCPVCRRDL 155
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 142 ERCVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSN 188
E CVIC ++ GE+ L L +C H +H CI KWLQ CP C N
Sbjct: 133 EECVICLSDFVSGEQ-LRLLPKCNHGFHVRCIDKWLQQHLTCPKCRN 178
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 144 CVICQVEYEEGEEALVALDQCEHPYHGDCISKWLQIKKVCPICSNEVST 192
C IC EY EE + L +CEH +H +CI WL++ CP+C N S+
Sbjct: 264 CPICLSEYT-SEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRNSPSS 311