Miyakogusa Predicted Gene

Lj0g3v0259029.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0259029.1 tr|A9TL62|A9TL62_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_170683,33.33,0.0000000000001, ,CUFF.17052.1
         (167 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G51800.1 | Symbols:  | Protein kinase superfamily protein | c...   187   4e-48

>AT5G51800.1 | Symbols:  | Protein kinase superfamily protein |
           chr5:21048317-21051906 FORWARD LENGTH=972
          Length = 972

 Score =  187 bits (474), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 87/165 (52%), Positives = 118/165 (71%), Gaps = 3/165 (1%)

Query: 3   LQDQWPNVTGFINSYCLWRGEETVHVKQGQPDPSSTLVSKLHWTYMDLPYMLGYYAVGKT 62
           +Q QWPNV G++  + LWRGEE   V++G  DPSS L  K+ W+Y DLPY+LGY+A+G T
Sbjct: 628 VQHQWPNVIGYVKGFGLWRGEEADKVREGAADPSSLLAEKILWSYNDLPYILGYHAIGFT 687

Query: 63  VTFCALSTSSDANGIINRTDLLEMNLATPSDRLKAMVPCFRIGLLLHVLSKRCLSIGNCY 122
           VTFCALS SS    I   TDL   N+++PSDR+KA+VPC+R+  LL +L+ RC +  +CY
Sbjct: 688 VTFCALSLSSQDRVIC--TDLYSFNVSSPSDRIKALVPCYRLASLLPLLADRCTTRPSCY 745

Query: 123 SDFQRVYLGHGVVTEMTPNTCTRVFSEKRKWAAVKEVYEILDHRI 167
           +DF+R+  G   VTE+TP+T TR +S KRKW  VK +Y+ LD R+
Sbjct: 746 NDFERIDRGD-YVTELTPHTVTRYYSSKRKWLGVKGIYDFLDQRV 789