Miyakogusa Predicted Gene
- Lj0g3v0258839.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0258839.1 Non Chatacterized Hit- tr|I1JKC6|I1JKC6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.841
PE=3,93.18,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; HELICASE_CTER,Helicase, C-termina,CUFF.17030.1
(384 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 616 e-177
AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 | ch... 353 8e-98
AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 263 2e-70
AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosph... 253 2e-67
AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 252 3e-67
AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosph... 240 2e-63
AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosph... 235 4e-62
AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 228 5e-60
AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosph... 227 1e-59
AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosph... 225 4e-59
AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family prote... 224 7e-59
AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 224 7e-59
AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 224 7e-59
AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosph... 224 8e-59
AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative | ... 216 2e-56
AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosph... 215 3e-56
AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosph... 215 5e-56
AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family prote... 214 6e-56
AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 214 6e-56
AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 214 8e-56
AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosph... 214 1e-55
AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosph... 214 1e-55
AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides,... 211 7e-55
AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |... 209 3e-54
AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 209 4e-54
AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |... 208 5e-54
AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 208 6e-54
AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 | chr4:27... 208 6e-54
AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA... 207 7e-54
AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 207 1e-53
AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 207 1e-53
AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 207 1e-53
AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 207 1e-53
AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 207 1e-53
AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 | ... 207 1e-53
AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family ... 206 2e-53
AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 205 4e-53
AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA ... 203 1e-52
AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor ... 203 2e-52
AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 198 5e-51
AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 198 5e-51
AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |... 198 6e-51
AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 9e-51
AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 197 1e-50
AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 196 2e-50
AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 196 2e-50
AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family prot... 196 2e-50
AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiatio... 194 7e-50
AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translat... 194 1e-49
AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) | c... 193 2e-49
AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-2026201... 192 3e-49
AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosph... 191 5e-49
AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 191 7e-49
AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosph... 189 2e-48
AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase... 187 9e-48
AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosph... 186 2e-47
AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosph... 185 4e-47
AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosph... 181 6e-46
AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family prot... 179 3e-45
AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosph... 176 3e-44
AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosph... 176 3e-44
AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleos... 176 3e-44
AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosph... 173 1e-43
AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 172 2e-43
AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 | chr4:900142... 170 1e-42
AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 167 1e-41
AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWAR... 167 2e-41
AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosph... 166 4e-41
AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 164 8e-41
AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) | c... 164 1e-40
AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 163 2e-40
AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosph... 159 3e-39
AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosph... 148 6e-36
AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside triph... 130 1e-30
AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 120 1e-27
AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family prot... 120 1e-27
AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosph... 112 3e-25
AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family prote... 78 9e-15
AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosph... 66 5e-11
AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase (... 53 3e-07
AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase... 52 7e-07
>AT5G60990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:24546601-24549148 REVERSE LENGTH=456
Length = 456
Score = 616 bits (1589), Expect = e-177, Method: Compositional matrix adjust.
Identities = 298/390 (76%), Positives = 337/390 (86%), Gaps = 12/390 (3%)
Query: 1 MEEENEIEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSG 60
MEEENE V K+F +LG+ + LV+ACE+LGW P KIQAEA+P AL+GKDVIGLAQTGSG
Sbjct: 1 MEEENE--VVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSG 58
Query: 61 KTGAFALPILHALLE---------APRPN-HFFACVMSPTRELAIQIAEQFEALGSEIGV 110
KTGAFA+PIL ALLE RP+ FFACV+SPTRELAIQIAEQFEALG++I +
Sbjct: 59 KTGAFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISL 118
Query: 111 KCAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLN 170
+CAVLVGGID +QQ+I + K+PH+IV TPGR+ DH+ +TKGFS LKYLVLDEADRLLN
Sbjct: 119 RCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLN 178
Query: 171 EDFEESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQ 230
EDFE+SLN+IL+ IP ER+TFLFSATMTKKV+KLQR CLRNPVKIEAASKYSTVDTLKQQ
Sbjct: 179 EDFEKSLNQILEEIPLERKTFLFSATMTKKVRKLQRACLRNPVKIEAASKYSTVDTLKQQ 238
Query: 231 YRFLPAKHKDCYLVYILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSK 290
YRF+ AK+KDCYLVYIL+EM ESTSM+FTRTCD TR +AIPI+G M+QSK
Sbjct: 239 YRFVAAKYKDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSK 298
Query: 291 RLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSG 350
RLGALNKFK+GECNIL+CTDVASRGLDIP+VD+VINYDIPTNSKDYIHRVGRTARAGRSG
Sbjct: 299 RLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSG 358
Query: 351 VAISLVNQYELEWYIQIEKLIGKKLPEYPA 380
V ISLVNQYELEWYIQIEKLIGKKLPEYPA
Sbjct: 359 VGISLVNQYELEWYIQIEKLIGKKLPEYPA 388
>AT1G16280.1 | Symbols: RH36, AtRH36, SWA3 | RNA helicase 36 |
chr1:5568482-5570487 REVERSE LENGTH=491
Length = 491
Score = 353 bits (907), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 181/372 (48%), Positives = 250/372 (67%), Gaps = 7/372 (1%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILH 71
+F+ LGL + VE C++LG P +Q +P L G+DV+GLAQTGSGKT AFALPILH
Sbjct: 59 NFEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILH 118
Query: 72 ALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQ 131
L E P FA V++PTRELA Q+AEQF+ALGS + ++C+V+VGG+DM+ Q++ + +
Sbjct: 119 RLAEDPY--GVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSR 176
Query: 132 PHIIVGTPGRVLDHLKNTKGFS--FSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERR 189
PHI++ TPGR+ L+N FSR K+LVLDEADR+L+ F++ L I Q +P+ R+
Sbjct: 177 PHIVITTPGRIKVLLENNPDVPPVFSRTKFLVLDEADRVLDVGFQDELRTIFQCLPKSRQ 236
Query: 190 TFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTE 249
T LFSATMT +Q L EA TVDTL QQ+ F K+ YLV+IL++
Sbjct: 237 TLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIFEDKDAKELYLVHILSQ 296
Query: 250 MAES---TSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNIL 306
M + ++M+F TC + + + I ++ SQS RL AL+KFKSG+ IL
Sbjct: 297 MEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKVPIL 356
Query: 307 LCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQ 366
L TDVASRGLDIPTVD+VINYDIP + +DY+HRVGRTARAGR G+A+S++ + +++ +
Sbjct: 357 LATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKLIHK 416
Query: 367 IEKLIGKKLPEY 378
IE+ +GKK+ Y
Sbjct: 417 IEEEVGKKMEPY 428
>AT4G16630.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:9362176-9366449 REVERSE LENGTH=789
Length = 789
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 213/370 (57%), Gaps = 8/370 (2%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILH 71
+F +L L L+ ACE LG+ P IQA IPLAL G+D+ A TGSGKT AFALP L
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 72 ALLEAPRPNHFFAC---VMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKI 128
LL RP FA +++PTRELA+QI + L +KC ++VGG+ + +Q + +
Sbjct: 228 RLLF--RPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVL 285
Query: 129 AKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRER 188
P I+V TPGR++DHL+N+ L L+LDEADRLL F + E+++ P+ R
Sbjct: 286 RSMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRR 345
Query: 189 RTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQY---RFLPAKHKDCYLVY 245
+T LFSATMT++V++L ++ L P+++ A L ++ R +++ L+
Sbjct: 346 QTMLFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLS 405
Query: 246 ILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNI 305
+ T +S ++F+ T + KA ++G+++Q++RL +L F+ E +
Sbjct: 406 LCTRTFKSKVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDF 465
Query: 306 LLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYI 365
L+ TDVA+RGLDI V VINY P Y+HRVGRTARAGR G A++ V +
Sbjct: 466 LIATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSDRSLLK 525
Query: 366 QIEKLIGKKL 375
I K +G KL
Sbjct: 526 VIAKKVGSKL 535
>AT3G18600.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:6399724-6403007
REVERSE LENGTH=568
Length = 568
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/372 (40%), Positives = 219/372 (58%), Gaps = 9/372 (2%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILH 71
+F L L + A +++G+ +IQA +I L+GKDV+G A+TGSGKT AF +P +
Sbjct: 90 TFDSLDLSEQTSIAIKEMGFQYMTQIQAGSIQPLLEGKDVLGAARTGSGKTLAFLIPAVE 149
Query: 72 ALLE---APRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKI 128
L + +PR N V+ PTRELAIQ E L ++++GG + ++ +I
Sbjct: 150 LLFKERFSPR-NGTGVIVICPTRELAIQTKNVAEELLKHHSQTVSMVIGGNNRRSEAQRI 208
Query: 129 AKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRER 188
A ++++ TPGR+LDHL+NTK F + LK LV+DEADR+L E+FEE +N+IL+ +P+ R
Sbjct: 209 ASGSNLVIATPGRLLDHLQNTKAFIYKHLKCLVIDEADRILEENFEEDMNKILKILPKTR 268
Query: 189 RTFLFSATMTKKVQKLQRVCLRNPVKIEA--ASKYSTVDTLKQQYRFLPAKHKDCYLVYI 246
+T LFSAT T KV+ L RV L +PV ++ + T + L+Q Y +P+K + L+
Sbjct: 269 QTALFSATQTSKVKDLARVSLTSPVHVDVDDGRRKVTNEGLEQGYCVVPSKQRLILLISF 328
Query: 247 LTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNIL 306
L + MVF TC S + I+G M Q++R F + IL
Sbjct: 329 LKKNLNKKIMVFFSTCKSVQFHTEIMKISDVDVSDIHGGMDQNRRTKTFFDFMKAKKGIL 388
Query: 307 LCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARA-GRSGVAISLVNQYELEW-- 363
LCTDVA+RGLDIP+VD +I YD P +YIHRVGRTAR G G A+ ++ EL++
Sbjct: 389 LCTDVAARGLDIPSVDWIIQYDPPDKPTEYIHRVGRTARGEGAKGKALLVLIPEELQFIR 448
Query: 364 YIQIEKLIGKKL 375
Y++ K+ K+L
Sbjct: 449 YLKAAKVPVKEL 460
>AT5G65900.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:26358328-26361244 FORWARD LENGTH=633
Length = 633
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 225/380 (59%), Gaps = 17/380 (4%)
Query: 7 IEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFA 66
I +K+F+ L L D+ ++ +++G+ +IQA+AIP + G+DV+G A+TGSGKT AF
Sbjct: 150 IMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFL 209
Query: 67 LP---ILHALLEAPRPNHFFACVMSPTRELAIQ---IAEQFEALGSEIGVKCAVLVGGID 120
+P +L+ + PR N V+ PTRELAIQ +A++ S+ ++GG
Sbjct: 210 IPAVELLYRVKFTPR-NGTGVLVICPTRELAIQSYGVAKELLKYHSQT---VGKVIGGEK 265
Query: 121 MVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEI 180
++ +AK +++V TPGR+LDHL+NT GF F LK+LV+DEADR+L ++FEE L +I
Sbjct: 266 RKTEAEILAKGVNLLVATPGRLLDHLENTNGFIFKNLKFLVMDEADRILEQNFEEDLKKI 325
Query: 181 LQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEA--ASKYSTVDTLKQQYRFLPAKH 238
L +P+ R+T LFSAT + KV+ L RV L +PV I+ K T + L+Q Y +P+
Sbjct: 326 LNLLPKTRQTSLFSATQSAKVEDLARVSLTSPVYIDVDEGRKEVTNEGLEQGYCVVPSAM 385
Query: 239 KDCYLVYILTEM-AESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNK 297
+ +L+ L + MVF TC ST+ + I G + Q+KR +
Sbjct: 386 RLLFLLTFLKRFQGKKKIMVFFSTCKSTKFHAELFRYIKFDCLEIRGGIDQNKRTPTFLQ 445
Query: 298 FKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARA-GRSGVAISLV 356
F E ILLCT+VA+RGLD P VD ++ YD P N DYIHRVGRTAR G G A+ ++
Sbjct: 446 FIKAETGILLCTNVAARGLDFPHVDWIVQYDPPDNPTDYIHRVGRTARGEGAKGKALLVL 505
Query: 357 NQYELEWYIQIEKLIGKKLP 376
EL++ I+ L K+P
Sbjct: 506 TPQELKF---IQYLKAAKIP 522
>AT2G33730.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:14265679-14267880
REVERSE LENGTH=733
Length = 733
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/384 (35%), Positives = 210/384 (54%), Gaps = 24/384 (6%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
+S+++ L L++A E+ G+ P IQ AIPL LQ +DVIG+A+TGSGKT AF LP+L
Sbjct: 313 RSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 372
Query: 71 HALLEAP------RPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQ 124
+ P +A VM+PTRELA QI E+ +G + +VGG + +Q
Sbjct: 373 AYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEEQ 432
Query: 125 SIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAI 184
+KI + I++ TPGR++D L+ ++ Y+VLDEADR+++ FE + +L A+
Sbjct: 433 GLKITQGCEIVIATPGRLIDCLERRYAV-LNQCNYVVLDEADRMIDMGFEPQVAGVLDAM 491
Query: 185 PRE-----------------RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTL 227
P R T++FSATM V++L R LRNPV + + T D +
Sbjct: 492 PSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTIGTAGKTTDLI 551
Query: 228 KQQYRFLPAKHKDCYLVYILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMS 287
Q + K L +L E+ E T++VF T + + ++G S
Sbjct: 552 SQHVIMMKESEKFFRLQKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKS 611
Query: 288 QSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAG 347
Q +R +L F++ N+L+ TDV RG+DIP V VINYD+P + + Y HR+GRT RAG
Sbjct: 612 QEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAG 671
Query: 348 RSGVAISLVNQYELEWYIQIEKLI 371
+SGVA S + ++ E + +++++
Sbjct: 672 KSGVATSFLTLHDTEVFYDLKQML 695
>AT5G63120.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25318967-25322071
REVERSE LENGTH=591
Length = 591
Score = 235 bits (599), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 209/366 (57%), Gaps = 6/366 (1%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
K F+D PD+++EA KLG+T P IQA+ P+AL+G+D+IG+A+TGSGKT A+ LP L
Sbjct: 165 KMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 224
Query: 71 HALLEAPR---PNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+ PR + +++PTRELA+QI E+ G GV+ + GG Q
Sbjct: 225 VHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRD 284
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ + I++ TPGR++D L+ + + R+ YLVLDEADR+L+ FE + +I+ I +
Sbjct: 285 LRRGVEIVIATPGRLIDMLE-CQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 343
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVK-IEAASKYSTVDTLKQQYRFLPAKHKDCYLVYI 246
R+T L+SAT ++V+ L R LR+P K I ++ ++ Q +P K L+ +
Sbjct: 344 RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTL 403
Query: 247 LTEMAESTS-MVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNI 305
L ++ + + ++F T A+ I+G +QS+R L +FKSG I
Sbjct: 404 LKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPI 463
Query: 306 LLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYI 365
+ TDVA+RGLD+ + V+NYD P +DYIHR+GRT RAG G+A + ++
Sbjct: 464 MTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFAR 523
Query: 366 QIEKLI 371
++ K++
Sbjct: 524 ELVKIL 529
>AT1G55150.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:20574634-20577141 FORWARD LENGTH=501
Length = 501
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 127/350 (36%), Positives = 203/350 (58%), Gaps = 6/350 (1%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
KSF+D+G PD ++E +K G+T P IQ++ P+A++G+D+IG+A+TGSGKT ++ LP +
Sbjct: 99 KSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAI 158
Query: 71 HALLEAPRPNHF---FACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+ P H V++PTRELA+QI ++ GS +K + GG+ Q
Sbjct: 159 VHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRD 218
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ K I++ TPGR++D +++ + R+ YLVLDEADR+L+ F+ + +I+ I +
Sbjct: 219 LQKGVEIVIATPGRLIDMMESNN-TNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPD 277
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVK-IEAASKYSTVDTLKQQYRFLPAKHKDCYLVYI 246
R+T +SAT K+V++L + L NP K I +S ++Q + K LV +
Sbjct: 278 RQTLYWSATWPKEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKL 337
Query: 247 LTEMAESTS-MVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNI 305
L ++ + + +VF T A+ I+G SQ++R L++F+SG+ I
Sbjct: 338 LEDIMDGSRILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPI 397
Query: 306 LLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL 355
+ TDVA+RGLD+ V VINYD P + +DY+HR+GRT RAG G A +
Sbjct: 398 MTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTF 447
>AT1G20920.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7286356-7288842
FORWARD LENGTH=828
Length = 828
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 208/375 (55%), Gaps = 8/375 (2%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
K + GL +++ +KL + P+ IQ +A+P+ + G+D IG+A+TGSGKT F LP+L
Sbjct: 191 KFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML 250
Query: 71 HALLEAP---RPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+ + P + VM+PTREL QI +G++C + GG + QQ +
Sbjct: 251 RHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISE 310
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKG--FSFSRLKYLVLDEADRLLNEDFEESLNEILQAIP 185
+ + I+V TPGR++D L + G + R+ +LV+DEADR+ + FE + I+Q I
Sbjct: 311 LKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIR 370
Query: 186 RERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVY 245
ER+T LFSAT ++V+ L R L PV+I+ + + Q P + L+
Sbjct: 371 PERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLE 430
Query: 246 ILTEMAESTS-MVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECN 304
+L E +E +VF ++ + + ++G Q+ R ++ FK+ CN
Sbjct: 431 LLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCN 490
Query: 305 ILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWY 364
+L+ T VA+RGLD+ +++V+N+D P + +DY+HRVGRT RAGR G A++ +++ + ++
Sbjct: 491 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYA 550
Query: 365 IQIEKLIGKKLPEYP 379
+ K + +L E P
Sbjct: 551 PDLVKAL--ELSEQP 563
>AT1G20920.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:7285342-7288842
FORWARD LENGTH=1166
Length = 1166
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 123/375 (32%), Positives = 208/375 (55%), Gaps = 8/375 (2%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
K + GL +++ +KL + P+ IQ +A+P+ + G+D IG+A+TGSGKT F LP+L
Sbjct: 529 KFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML 588
Query: 71 HALLEAP---RPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+ + P + VM+PTREL QI +G++C + GG + QQ +
Sbjct: 589 RHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISE 648
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKG--FSFSRLKYLVLDEADRLLNEDFEESLNEILQAIP 185
+ + I+V TPGR++D L + G + R+ +LV+DEADR+ + FE + I+Q I
Sbjct: 649 LKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIR 708
Query: 186 RERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVY 245
ER+T LFSAT ++V+ L R L PV+I+ + + Q P + L+
Sbjct: 709 PERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLE 768
Query: 246 ILTEMAESTS-MVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECN 304
+L E +E +VF ++ + + ++G Q+ R ++ FK+ CN
Sbjct: 769 LLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCN 828
Query: 305 ILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWY 364
+L+ T VA+RGLD+ +++V+N+D P + +DY+HRVGRT RAGR G A++ +++ + ++
Sbjct: 829 LLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYA 888
Query: 365 IQIEKLIGKKLPEYP 379
+ K + +L E P
Sbjct: 889 PDLVKAL--ELSEQP 901
>AT3G58510.3 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 216/391 (55%), Gaps = 21/391 (5%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
+F D+ L D+L + + P +Q AIP+ L +D++ AQTGSGKT AF PI+
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 71 HALL-----EAPRPN---HFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 122
++ E PR + + FA ++SPTRELA QI ++ + + GVK V GG +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 123 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQ 182
QQ ++ + I+V TPGR+ D L+ + S +++L LDEADR+L+ FE + +I++
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERAR-VSMQMIRFLALDEADRMLDMGFEPQIRKIVE 329
Query: 183 AI---PRE-RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKH 238
+ PR R+T LFSAT ++Q+L + N + + S+ D + Q+ F+
Sbjct: 330 QMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESD 389
Query: 239 KDCYLVYIL-----TEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLG 293
K +L+ +L T+ +S ++VF T A I+G +Q +R
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 294 ALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAI 353
AL FK+G IL+ TDVA+RGLDIP V V+N+D+P + DY+HR+GRT RAG+SG+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
Query: 354 SLVNQYELEWYIQIEKLI---GKKLPEYPAR 381
+ N+ + + +L+ +++PE+ R
Sbjct: 510 AFFNENNAQLARSLAELMQEANQEVPEWLTR 540
>AT3G58510.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 216/391 (55%), Gaps = 21/391 (5%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
+F D+ L D+L + + P +Q AIP+ L +D++ AQTGSGKT AF PI+
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 71 HALL-----EAPRPN---HFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 122
++ E PR + + FA ++SPTRELA QI ++ + + GVK V GG +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 123 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQ 182
QQ ++ + I+V TPGR+ D L+ + S +++L LDEADR+L+ FE + +I++
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERAR-VSMQMIRFLALDEADRMLDMGFEPQIRKIVE 329
Query: 183 AI---PRE-RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKH 238
+ PR R+T LFSAT ++Q+L + N + + S+ D + Q+ F+
Sbjct: 330 QMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESD 389
Query: 239 KDCYLVYIL-----TEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLG 293
K +L+ +L T+ +S ++VF T A I+G +Q +R
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 294 ALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAI 353
AL FK+G IL+ TDVA+RGLDIP V V+N+D+P + DY+HR+GRT RAG+SG+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
Query: 354 SLVNQYELEWYIQIEKLI---GKKLPEYPAR 381
+ N+ + + +L+ +++PE+ R
Sbjct: 510 AFFNENNAQLARSLAELMQEANQEVPEWLTR 540
>AT3G58510.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:21640608-21643464 FORWARD LENGTH=612
Length = 612
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 216/391 (55%), Gaps = 21/391 (5%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
+F D+ L D+L + + P +Q AIP+ L +D++ AQTGSGKT AF PI+
Sbjct: 151 NTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKTAAFCFPII 210
Query: 71 HALL-----EAPRPN---HFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 122
++ E PR + + FA ++SPTRELA QI ++ + + GVK V GG +
Sbjct: 211 SGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIH 270
Query: 123 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQ 182
QQ ++ + I+V TPGR+ D L+ + S +++L LDEADR+L+ FE + +I++
Sbjct: 271 QQLRELERGCDILVATPGRLNDLLERAR-VSMQMIRFLALDEADRMLDMGFEPQIRKIVE 329
Query: 183 AI---PRE-RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKH 238
+ PR R+T LFSAT ++Q+L + N + + S+ D + Q+ F+
Sbjct: 330 QMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDLITQRVEFVQESD 389
Query: 239 KDCYLVYIL-----TEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLG 293
K +L+ +L T+ +S ++VF T A I+G +Q +R
Sbjct: 390 KRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREV 449
Query: 294 ALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAI 353
AL FK+G IL+ TDVA+RGLDIP V V+N+D+P + DY+HR+GRT RAG+SG+A
Sbjct: 450 ALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGIAT 509
Query: 354 SLVNQYELEWYIQIEKLI---GKKLPEYPAR 381
+ N+ + + +L+ +++PE+ R
Sbjct: 510 AFFNENNAQLARSLAELMQEANQEVPEWLTR 540
>AT2G47330.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:19429083-19431617
REVERSE LENGTH=760
Length = 760
Score = 224 bits (571), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 200/359 (55%), Gaps = 7/359 (1%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
K+F+D G ++ A +K + P IQ +A+P+ L G+DVIG+A+TGSGKT AF LP++
Sbjct: 228 KTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMI 287
Query: 71 HALLEAP---RPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+++ P R + +PTRELA QI + + G++ + + GG+ +Q +
Sbjct: 288 VHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKE 347
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ I+V TPGR++D LK K + R YLVLDEADR+ + FE + I+ I +
Sbjct: 348 LKAGCEIVVATPGRLIDMLK-MKALTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPD 406
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAK-HKDCYLVYI 246
R+T LFSATM KV+KL R L +P+++ + + Q +P+ K +L+
Sbjct: 407 RQTLLFSATMPWKVEKLAREILSDPIRVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEK 466
Query: 247 LTEM-AESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNI 305
L M E +VF + K ++G Q+ R+ L KFKSG ++
Sbjct: 467 LPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHV 526
Query: 306 LLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAG-RSGVAISLVNQYELEW 363
L+ TDVA+RGLDI ++ V+NYDI + ++HR+GRT RAG R GVA +LV Q E +
Sbjct: 527 LIATDVAARGLDIKSLKTVVNYDIAKDMDMHVHRIGRTGRAGDRDGVAYTLVTQREARF 585
>AT5G51280.1 | Symbols: | DEAD-box protein abstrakt, putative |
chr5:20841456-20843645 FORWARD LENGTH=591
Length = 591
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 197/367 (53%), Gaps = 20/367 (5%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
K+FKD+ P +++ ++ G P IQ + +P+ L G+D+IG+A TGSGKT F LP++
Sbjct: 146 KNFKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMI 205
Query: 71 HALLE---------APRPNHFFACVMSPTRELAIQ---IAEQFEALGSEIG---VKCAVL 115
L+ P C P+RELA Q + EQF A E G ++ +
Sbjct: 206 MIALQEEMMMPIAAGEGPIGLIVC---PSRELARQTYEVVEQFVAPLVEAGYPPLRSLLC 262
Query: 116 VGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEE 175
+GGIDM Q + + HI+V TPGR+ D L K S +YL LDEADRL++ FE+
Sbjct: 263 IGGIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKK-MSLDACRYLTLDEADRLVDLGFED 321
Query: 176 SLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLP 235
+ E+ +R+T LFSATM K+Q R L PV + + + Q+ ++
Sbjct: 322 DIREVFDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAGAANLDVIQEVEYVK 381
Query: 236 AKHKDCYLVYILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGAL 295
+ K YL+ L + + ++F +A+ I+G Q R A+
Sbjct: 382 QEAKIVYLLECLQKTSPPV-LIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYAI 440
Query: 296 NKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL 355
+ FK+G+ ++L+ TDVAS+GLD P + VINYD+P ++Y+HR+GRT R G++G+A +
Sbjct: 441 SSFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPAEIENYVHRIGRTGRCGKTGIATTF 500
Query: 356 VNQYELE 362
+N+ + E
Sbjct: 501 INKNQSE 507
>AT3G09620.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2949152-2952205
REVERSE LENGTH=989
Length = 989
Score = 215 bits (548), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 200/369 (54%), Gaps = 37/369 (10%)
Query: 17 GLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEA 76
GL +++ +KL + P+ IQA+A+P+ + G+D IG+A+TGSGKT F LP+L + +
Sbjct: 402 GLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQ 461
Query: 77 P---RPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQPH 133
P + VM+PTREL QI +G+ C + GG + QQ ++ +
Sbjct: 462 PPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALGIICVPVYGGSGVAQQISELKRGTE 521
Query: 134 IIVGTPGRVLDHLKNTKG--FSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTF 191
I+V TPGR++D L + G + R+ YLV+DEADR+ + FE + I+Q I +R+T
Sbjct: 522 IVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTV 581
Query: 192 LFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMA 251
LFSAT ++V+ L R L PV+I+ + + Q P + L+ +L E
Sbjct: 582 LFSATFPRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEIRPESERFSRLLELLGEWY 641
Query: 252 ESTS-MVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTD 310
E +VF R SQ K +++ FKS CN+L+ T
Sbjct: 642 EKGKVLVFVR--------------------------SQEK---SISDFKSDVCNLLIATS 672
Query: 311 VASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKL 370
VA+RGLD+ +++V+N+D P + +DY+HRVGRT RAGR G A++ +++ + ++ + K
Sbjct: 673 VAARGLDVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKA 732
Query: 371 IGKKLPEYP 379
+ +L E P
Sbjct: 733 L--ELSEQP 739
>AT2G42520.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:17705382-17708744
FORWARD LENGTH=633
Length = 633
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 133/393 (33%), Positives = 214/393 (54%), Gaps = 23/393 (5%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
+F ++ L ++L + + P +Q AIP+ L+G+D++ AQTGSGKT AF PI+
Sbjct: 159 NTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPII 218
Query: 71 HALL-----EAPRPN---HFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 122
++ + PR + + A ++SPTRELA QI ++ + + GVK V GG +
Sbjct: 219 SGIMKDQHVQRPRGSRTVYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPIN 278
Query: 123 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQ 182
QQ ++ + I+V TPGR+ D L+ + S +++L LDEADR+L+ FE + +I++
Sbjct: 279 QQLRELERGVDILVATPGRLNDLLERAR-VSMQMIRFLALDEADRMLDMGFEPQIRKIVE 337
Query: 183 AI---PRE-RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKH 238
+ PR R+T LFSAT +++Q+L L N + + S+ D + Q+ F+
Sbjct: 338 QMDMPPRGVRQTLLFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSD 397
Query: 239 KDCYLVYILTEMAEST-------SMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKR 291
K +L+ +L E+ ++VF T A I+G +Q +R
Sbjct: 398 KRSHLMDLLHAQRENGIQGKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQER 457
Query: 292 LGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGV 351
AL FKSG IL+ TDVA+RGLDIP V V+N+D+P + DY+HR+GRT RAG+SG+
Sbjct: 458 EVALKAFKSGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKSGL 517
Query: 352 AISLVNQYELEWYIQIEKLI---GKKLPEYPAR 381
A + N + +L+ +++PE+ R
Sbjct: 518 ATAFFNDGNTSLARPLAELMQEANQEVPEWLTR 550
>AT3G61240.2 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 203/369 (55%), Gaps = 6/369 (1%)
Query: 13 FKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHA 72
F+D L L++ + G+ P IQ E+IP+AL G D++ A+ G+GKTGAF +P+L
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 73 LLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQP 132
+ P N A ++ PTRELA+Q ++ + L + ++ V GG + +++ +
Sbjct: 186 I--DPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPV 243
Query: 133 HIIVGTPGRVLDHLKNTKGFS-FSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTF 191
H++VGTPGR+LD K KG LV+DEAD+LL+ +F+ SL E++Q +P+ R+
Sbjct: 244 HLLVGTPGRILDLTK--KGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFL 301
Query: 192 LFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMA 251
+FSAT V+ + LR P I + T+ + Q Y F+ + K L + +++
Sbjct: 302 MFSATFPVTVKAFKDRHLRKPYVINLMDQL-TLMGVTQYYAFVEERQKVHCLNTLFSKLQ 360
Query: 252 ESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDV 311
+ S++F + + I+ M Q R ++F++G C L+CTD+
Sbjct: 361 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDL 420
Query: 312 ASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLI 371
+RG+DI V++VIN+D P S+ Y+HRVGR+ R G G+A++LV + Q E+ +
Sbjct: 421 FTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQEL 480
Query: 372 GKKLPEYPA 380
G ++ P+
Sbjct: 481 GTEIKPIPS 489
>AT3G61240.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:22666590-22669154 FORWARD LENGTH=498
Length = 498
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 203/369 (55%), Gaps = 6/369 (1%)
Query: 13 FKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHA 72
F+D L L++ + G+ P IQ E+IP+AL G D++ A+ G+GKTGAF +P+L
Sbjct: 126 FEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPVLEK 185
Query: 73 LLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQP 132
+ P N A ++ PTRELA+Q ++ + L + ++ V GG + +++ +
Sbjct: 186 I--DPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDIMRLHQPV 243
Query: 133 HIIVGTPGRVLDHLKNTKGFS-FSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTF 191
H++VGTPGR+LD K KG LV+DEAD+LL+ +F+ SL E++Q +P+ R+
Sbjct: 244 HLLVGTPGRILDLTK--KGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQNRQFL 301
Query: 192 LFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMA 251
+FSAT V+ + LR P I + T+ + Q Y F+ + K L + +++
Sbjct: 302 MFSATFPVTVKAFKDRHLRKPYVINLMDQL-TLMGVTQYYAFVEERQKVHCLNTLFSKLQ 360
Query: 252 ESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDV 311
+ S++F + + I+ M Q R ++F++G C L+CTD+
Sbjct: 361 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLVCTDL 420
Query: 312 ASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLI 371
+RG+DI V++VIN+D P S+ Y+HRVGR+ R G G+A++LV + Q E+ +
Sbjct: 421 FTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQEL 480
Query: 372 GKKLPEYPA 380
G ++ P+
Sbjct: 481 GTEIKPIPS 489
>AT1G71370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26897235-26899381 REVERSE LENGTH=558
Length = 558
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 133/358 (37%), Positives = 194/358 (54%), Gaps = 12/358 (3%)
Query: 18 LPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEA- 76
L + ++EA ++ G+ +QAE IP KDV+ A TGSGKT AF LP + + +
Sbjct: 23 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 82
Query: 77 ---PRPNHFFACVMSPTRELAIQIAEQFEALGSEI-GVKCAVLVGGIDMVQQSIKIAKQ- 131
P+P+ ++SPTREL+ QI + E S + V +LVGG ++ + ++
Sbjct: 83 SYPPKPHQVMGVIISPTRELSAQIHKVAEPFVSTLPNVNSVLLVGGREVEADMNTLEEEG 142
Query: 132 PHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTF 191
++++GTPGR+ D +K + F L+ L+LDEADRLL+ F++ +N I+ +P++RRT
Sbjct: 143 ANLLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTG 202
Query: 192 LFSATMTKKVQKLQRVCLRNPVKI--EAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTE 249
LFSAT T+ V L + LRN +++ A SK T L +Y A K LV++L E
Sbjct: 203 LFSATQTQAVADLAKAGLRNAMEVISGAESKSKTSSGLYCEYLKCEADQKSSQLVHLLIE 262
Query: 250 MAESTSMVFTRTCDSTRX-XXXXXXXXXXKAIPI---NGHMSQSKRLGALNKFKSGECNI 305
+VF TC K+I +G M Q R AL F +
Sbjct: 263 NKNKKLVVFFMTCACVDYWGLVLSKIPTLKSISFFSTHGKMDQKGRDTALASFTEASSGV 322
Query: 306 LLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 363
LLCTDVA+RGLDIP +D V+ YD P + +IHRVGRTAR R G AI + E ++
Sbjct: 323 LLCTDVAARGLDIPGIDYVVQYDPPQDPDVFIHRVGRTARMERQGRAIVFLMPKETDY 380
>AT5G05450.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:1612077-1615195
FORWARD LENGTH=593
Length = 593
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 140/382 (36%), Positives = 203/382 (53%), Gaps = 26/382 (6%)
Query: 13 FKDLGLPDS--LVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
F DL P S ++EA + + +QA IPL KDV A TGSGKT AF +P++
Sbjct: 16 FSDLEPPLSGDIIEALNQSDFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLV 75
Query: 71 HALLEA----PRPNHFFACVMSPTRELAIQIAEQFEALGSEIG-VKCAVLVGGIDMVQQS 125
L + P+P+ ++SPTREL+ QI + S + V +LVGG + V+
Sbjct: 76 EILRRSTSFPPKPHQVMGVIISPTRELSTQIYNVAQPFVSTLANVNSVLLVGGRE-VKAD 134
Query: 126 IKIAKQP--HIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQA 183
+KI ++ ++++GTPGR+ D ++ + F L+ L+LDEADRLL F+ +N I+
Sbjct: 135 MKIIEEEGCNVLIGTPGRLSDIMERMEILDFRNLEILILDEADRLLEMGFQRQVNYIISR 194
Query: 184 IPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASK-----------YSTVDTLKQQYR 232
+P++RRT LFSAT T+ V++L + LRNPV++E +K T L +Y
Sbjct: 195 LPKQRRTGLFSATQTEGVEELAKAGLRNPVRVEVRAKSKSESSQQLTNSKTPSGLHLEYM 254
Query: 233 FLPAKHKDCYLVYILTEMAESTSMVFTRTCDSTR----XXXXXXXXXXXKAIPINGHMSQ 288
A K LV +L + ++ +VF TC S IPI+G M Q
Sbjct: 255 ECEADKKSSQLVDLLIKNSDKKLIVFFMTCASVDYWGLVLSKIPALKSISLIPIHGDMKQ 314
Query: 289 SKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGR 348
+ R AL F LLCTDVA+RGLDIP +D V+ YD P + + HR GRTAR GR
Sbjct: 315 NARDKALASFTKASSGALLCTDVAARGLDIPGIDYVVQYDPPQDPNMFNHRAGRTARLGR 374
Query: 349 SGVAISLVNQYELEWYIQIEKL 370
G AI + E E Y++ ++
Sbjct: 375 QGRAIVFLLPKE-EAYVEFMRI 395
>AT3G58570.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:21657099-21660352
FORWARD LENGTH=646
Length = 646
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/366 (35%), Positives = 198/366 (54%), Gaps = 20/366 (5%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
+F ++ L ++L ++ + P +Q AIP+ G+D++ AQTGSGKT AF PI+
Sbjct: 146 NTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPII 205
Query: 71 HALL-----EAPRPN---HFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 122
++ E PR + A ++SPTRELA QI ++ + GVK V GG +
Sbjct: 206 SGIMKDQHIERPRGVRGVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVN 265
Query: 123 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQ 182
QQ ++ + I+V TPGR+ D L+ + S +++L LDEADR+L+ FE + +I+Q
Sbjct: 266 QQIRELERGVDILVATPGRLNDLLERGR-VSLQMVRFLALDEADRMLDMGFEPQIRKIVQ 324
Query: 183 AI----PRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKH 238
+ P R+T LFSAT +++Q+L L N + + S+ D + Q+ F+
Sbjct: 325 QMDMPPPGVRQTMLFSATFPREIQRLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSD 384
Query: 239 KDCYLVYILTEMAEST-------SMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKR 291
K +L+ +L E+ ++VF T A I+G SQ +R
Sbjct: 385 KRSHLMDLLHAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQER 444
Query: 292 LGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGV 351
AL FK+G IL+ TDVA+RGLDIP V V+N+D+P + DY+HR+GRT RAG SG+
Sbjct: 445 EVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGNSGL 504
Query: 352 AISLVN 357
A + N
Sbjct: 505 ATAFFN 510
>AT1G77030.1 | Symbols: | hydrolases, acting on acid anhydrides, in
phosphorus-containing anhydrides;ATP-dependent
helicases;nucleic acid binding;ATP binding;RNA
binding;helicases | chr1:28947887-28951526 REVERSE
LENGTH=845
Length = 845
Score = 211 bits (537), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 123/372 (33%), Positives = 201/372 (54%), Gaps = 8/372 (2%)
Query: 13 FKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHA 72
F+ L L ++ A +K G+ P IQ + +PL L G DV+ +A+TGSGKT AF +P+L
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 73 LLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQP 132
L + A ++SPTR+LA Q + + LG ++ ++LVGG M Q ++ K P
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGP 149
Query: 133 HIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTFL 192
+I+ TPGR++ L + ++Y+V DEAD L F E L++IL + R+T L
Sbjct: 150 DVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLL 209
Query: 193 FSATMTKKVQKLQRVCLRNP--VKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM 250
FSAT+ + + + LR P V+++ +K S LK + + + K L+Y++ E
Sbjct: 210 FSATLPSALAEFAKAGLREPQLVRLDVENKISP--DLKLSFLTVRPEEKYSALLYLVREH 267
Query: 251 --AESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLC 308
++ +++F T + G M Q R +++F++ + +L+
Sbjct: 268 ISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIV 327
Query: 309 TDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIE 368
TD+A+RG+DIP +D VIN+D P K ++HRVGR ARAGR+G A S V ++ + + +
Sbjct: 328 TDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMPYMLDLH 387
Query: 369 KLIGKKLPEYPA 380
+ K P PA
Sbjct: 388 LFLSK--PVRPA 397
>AT5G14610.2 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=645
Length = 645
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 127/354 (35%), Positives = 193/354 (54%), Gaps = 17/354 (4%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILH 71
SF+ GLP+ L+ G++ P IQA++ P+A+Q +D++ +A+TGSGKT + +P
Sbjct: 162 SFEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFM 221
Query: 72 ALLEAPRPNHFFAC--VMSPTRELAIQIAEQFEAL--GSEIGVKCAVLVGGIDMVQQSIK 127
L + V+SPTRELA QI Q EAL G + CA L GG Q +
Sbjct: 222 HLQRIHNDSRMGPTILVLSPTRELATQI--QVEALKFGKSSKISCACLYGGAPKGPQLKE 279
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
I + I+V TPGR+ D L+ K S ++ YLVLDEADR+L+ FE + +I+ +P +
Sbjct: 280 IERGVDIVVATPGRLNDILE-MKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTK 338
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTV--DTLKQQYRFLPAKHKDCYLVY 245
R+T +++AT K+V+K+ L NP ++ + V ++ Q L K L
Sbjct: 339 RQTLMYTATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQ 398
Query: 246 ILTEMAESTSMVF----TRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSG 301
IL + ++ R CD A I+G SQ++R LN+F+SG
Sbjct: 399 ILRSQEPGSKIIIFCSTKRMCDQ----LARNLTRTFGAAAIHGDKSQAERDDVLNQFRSG 454
Query: 302 ECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL 355
+L+ TDVA+RGLD+ + +V+NYD P +DY+HR+GRT RAG +G+A +
Sbjct: 455 RTPVLVATDVAARGLDVKDIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 508
>AT2G45810.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:18859836-18862318 FORWARD LENGTH=528
Length = 528
Score = 209 bits (531), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 119/369 (32%), Positives = 199/369 (53%), Gaps = 6/369 (1%)
Query: 13 FKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHA 72
F+D L L+ + G+ P IQ E+IP+AL G D++ A+ G+GKTGAF +P L
Sbjct: 156 FEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEK 215
Query: 73 LLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQP 132
+ P N A ++ PTRELA+Q ++ + L + ++ V GG + +++ +
Sbjct: 216 I--DPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPV 273
Query: 133 HIIVGTPGRVLDHLKNTKGFS-FSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTF 191
H++VGTPGR+LD K KG LV+DEAD+LL+ +F+ S+ E++Q +P R+
Sbjct: 274 HLLVGTPGRILDLAK--KGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQIL 331
Query: 192 LFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMA 251
+FSAT V+ + L+ P I + T+ + Q Y F+ + K L + +++
Sbjct: 332 MFSATFPVTVKSFKDRYLKKPYIINLMDQL-TLMGVTQYYAFVEERQKVHCLNTLFSKLQ 390
Query: 252 ESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDV 311
+ S++F + + I+ M Q R + F++G C L+CTD+
Sbjct: 391 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDL 450
Query: 312 ASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLI 371
+RG+DI V++VIN+D P S+ Y+HRVGR+ R G G+A++LV + Q E+ +
Sbjct: 451 FTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQEL 510
Query: 372 GKKLPEYPA 380
G ++ P+
Sbjct: 511 GTEIKPIPS 519
>AT3G06480.1 | Symbols: | DEAD box RNA helicase family protein |
chr3:1985697-1989666 REVERSE LENGTH=1088
Length = 1088
Score = 208 bits (530), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 124/368 (33%), Positives = 199/368 (54%), Gaps = 13/368 (3%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALP--I 69
+F+ GLP ++ G+ +P IQA+ P+ALQ +D++ +A+TGSGKT + +P I
Sbjct: 436 TFESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFI 495
Query: 70 LHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIA 129
L N +++PTRELA QI ++ G + C L GG Q ++
Sbjct: 496 LLRHCRNDSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELE 555
Query: 130 KQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERR 189
+ I+V TPGR+ D L+ K F ++ LVLDEADR+L+ FE + +I+ IP R+
Sbjct: 556 RGADIVVATPGRLNDILE-MKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQ 614
Query: 190 TFLFSATMTKKVQKLQRVCLRNPVKIEAA--SKYSTVDTLKQQYRFLPAKHKDCYLVYIL 247
T +++AT K+V+K+ L NPV++ + + + Q +P K+ L IL
Sbjct: 615 TLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQIL 674
Query: 248 TEMAESTSMVF----TRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGEC 303
+ ++ R CD A+ I+G +Q +R LN+F+SG+
Sbjct: 675 RSQERGSKVIIFCSTKRLCDH----LARSVGRHFGAVVIHGDKTQGERDWVLNQFRSGKS 730
Query: 304 NILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 363
+L+ TDVA+RGLDI + +VINYD PT +DY+HR+GRT RAG +GVA + + + ++
Sbjct: 731 CVLIATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKY 790
Query: 364 YIQIEKLI 371
+ K++
Sbjct: 791 APDLIKVL 798
>AT4G00660.1 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 202/368 (54%), Gaps = 6/368 (1%)
Query: 13 FKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHA 72
F+D L L+ + G+ P IQ E+IP+AL G+D++ A+ G+GKT AF +P+L
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 73 LLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQP 132
+ + N A ++ PTRELA+Q ++ + LG + ++ V GG + +++ +
Sbjct: 193 IDQDN--NVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 250
Query: 133 HIIVGTPGRVLDHLKNTKGFS-FSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTF 191
H++VGTPGR+LD K KG LV+DEAD+LL+++F+ S+ ++ +P R+
Sbjct: 251 HLLVGTPGRILDLTK--KGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQIL 308
Query: 192 LFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMA 251
+FSAT V+ + L NP I + T+ + Q Y F+ + K L + +++
Sbjct: 309 MFSATFPVTVKDFKDRFLTNPYVINLMDEL-TLKGITQFYAFVEERQKIHCLNTLFSKLQ 367
Query: 252 ESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDV 311
+ S++F + + I+ M Q R + F++G C L+CTD+
Sbjct: 368 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 427
Query: 312 ASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLI 371
+RG+DI V++VIN+D P N++ Y+HRVGR+ R G G+A++L+ + +IE+ +
Sbjct: 428 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 487
Query: 372 GKKLPEYP 379
G ++ + P
Sbjct: 488 GTEIKQIP 495
>AT4G00660.2 | Symbols: RH8, ATRH8 | RNAhelicase-like 8 |
chr4:274638-277438 FORWARD LENGTH=505
Length = 505
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 202/368 (54%), Gaps = 6/368 (1%)
Query: 13 FKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHA 72
F+D L L+ + G+ P IQ E+IP+AL G+D++ A+ G+GKT AF +P+L
Sbjct: 133 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEK 192
Query: 73 LLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQP 132
+ + N A ++ PTRELA+Q ++ + LG + ++ V GG + +++ +
Sbjct: 193 IDQDN--NVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMRLYQPV 250
Query: 133 HIIVGTPGRVLDHLKNTKGFS-FSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTF 191
H++VGTPGR+LD K KG LV+DEAD+LL+++F+ S+ ++ +P R+
Sbjct: 251 HLLVGTPGRILDLTK--KGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFLPESRQIL 308
Query: 192 LFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMA 251
+FSAT V+ + L NP I + T+ + Q Y F+ + K L + +++
Sbjct: 309 MFSATFPVTVKDFKDRFLTNPYVINLMDEL-TLKGITQFYAFVEERQKIHCLNTLFSKLQ 367
Query: 252 ESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDV 311
+ S++F + + I+ M Q R + F++G C L+CTD+
Sbjct: 368 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 427
Query: 312 ASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLI 371
+RG+DI V++VIN+D P N++ Y+HRVGR+ R G G+A++L+ + +IE+ +
Sbjct: 428 FTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 487
Query: 372 GKKLPEYP 379
G ++ + P
Sbjct: 488 GTEIKQIP 495
>AT3G22330.1 | Symbols: PMH2, ATRH53 | putative mitochondrial RNA
helicase 2 | chr3:7892641-7895145 FORWARD LENGTH=616
Length = 616
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 212/380 (55%), Gaps = 13/380 (3%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILH 71
+ +LG+ +V+A G IQ + A++G+D+IG A+TG+GKT AF +PI+
Sbjct: 105 AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 164
Query: 72 ALLE----APRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+++ R + V++PTRELA Q+ ++F + C L GG + QQ +
Sbjct: 165 KIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRQ 222
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ + VGTPGRV+D +K + S ++++VLDEAD++L F E + IL+ +P +
Sbjct: 223 LDYGVDVAVGTPGRVIDLMKR-GALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKLPEK 281
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIE--AASKYSTVDTLKQQYRFLPAKHKDCYLVY 245
R++ +FSATM ++ L + L NP+ ++ S D + + + +
Sbjct: 282 RQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASIIGP 341
Query: 246 ILTEMAESTS-MVFTRTC-DSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGEC 303
++TE A+ +VFT+T D+ R +A+ +G +SQS+R L F+ G
Sbjct: 342 LVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEAL--HGDISQSQRERTLAGFRDGHF 399
Query: 304 NILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 363
NIL+ TDVA+RGLD+P VD++I+Y++P N++ ++HR GRT RAG+ G AI + +Q +
Sbjct: 400 NILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRA 459
Query: 364 YIQIEKLIGKKLPEYPARAC 383
IE+ +G + E P+ A
Sbjct: 460 VKIIEREVGSRFTELPSIAV 479
>AT5G26742.2 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=748
Length = 748
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 209/383 (54%), Gaps = 21/383 (5%)
Query: 2 EEENEIEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGK 61
++ E+ +SK L LP L E+ EK G T IQ + ALQG+D+I A+TG+GK
Sbjct: 97 DDGEELAISK----LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 152
Query: 62 TGAFALPILHALLEAPRPNHFFA--------CVMSPTRELAIQIAEQFEALGSEIGVKCA 113
T AF +PI+ L E F V++PTRELA Q+ ++ + + C
Sbjct: 153 TLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVC- 211
Query: 114 VLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDF 173
+ GG+ Q + + ++VGTPGR++D ++ + ++YLVLDEAD++L F
Sbjct: 212 -VYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEG-RSLKLGEVEYLVLDEADQMLAVGF 269
Query: 174 EESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYST--VDTLKQQY 231
EE++ IL+ +P +R++ LFSATM V+KL R L NP+ I+ + +K
Sbjct: 270 EEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYA 329
Query: 232 RFLPAKHKDCYLVYILTEMAES-TSMVFTRTC-DSTRXXXXXXXXXXXKAIPINGHMSQS 289
+ K L ++T A+ ++VFT+T D+ +A+ +G +SQ
Sbjct: 330 IATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEAL--HGDISQH 387
Query: 290 KRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRS 349
+R LN F+ G+ +L+ TDVASRGLDIP VD+VI+Y++P + + ++HR GRT RAG+
Sbjct: 388 QRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 447
Query: 350 GVAISLVNQYELEWYIQIEKLIG 372
G AI + + +E+ +G
Sbjct: 448 GSAILMHTSSQKRTVRSLERDVG 470
>AT5G26742.1 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288871 REVERSE LENGTH=747
Length = 747
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/383 (34%), Positives = 209/383 (54%), Gaps = 21/383 (5%)
Query: 2 EEENEIEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGK 61
++ E+ +SK L LP L E+ EK G T IQ + ALQG+D+I A+TG+GK
Sbjct: 97 DDGEELAISK----LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGK 152
Query: 62 TGAFALPILHALLEAPRPNHFFA--------CVMSPTRELAIQIAEQFEALGSEIGVKCA 113
T AF +PI+ L E F V++PTRELA Q+ ++ + + C
Sbjct: 153 TLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVC- 211
Query: 114 VLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDF 173
+ GG+ Q + + ++VGTPGR++D ++ + ++YLVLDEAD++L F
Sbjct: 212 -VYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEG-RSLKLGEVEYLVLDEADQMLAVGF 269
Query: 174 EESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYST--VDTLKQQY 231
EE++ IL+ +P +R++ LFSATM V+KL R L NP+ I+ + +K
Sbjct: 270 EEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYA 329
Query: 232 RFLPAKHKDCYLVYILTEMAES-TSMVFTRTC-DSTRXXXXXXXXXXXKAIPINGHMSQS 289
+ K L ++T A+ ++VFT+T D+ +A+ +G +SQ
Sbjct: 330 IATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEAL--HGDISQH 387
Query: 290 KRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRS 349
+R LN F+ G+ +L+ TDVASRGLDIP VD+VI+Y++P + + ++HR GRT RAG+
Sbjct: 388 QRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKE 447
Query: 350 GVAISLVNQYELEWYIQIEKLIG 372
G AI + + +E+ +G
Sbjct: 448 GSAILMHTSSQKRTVRSLERDVG 470
>AT3G01540.1 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=618
Length = 618
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 191/355 (53%), Gaps = 19/355 (5%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALP-IL 70
SF+ G P L+ G++ P IQA++ P+A+QG+D++ +A+TGSGKT + +P L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 71 HALLEAPRPNHFFA---CVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
H L+ R + V+SPTRELA QI E+ G + C L GG Q
Sbjct: 219 H--LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRD 276
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ + I+V TPGR+ D L+ + S ++ YLVLDEADR+L+ FE + +I++ IP +
Sbjct: 277 LERGADIVVATPGRLNDILEMRR-ISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTK 335
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTV--DTLKQQYRFLPAKHKDCYLVY 245
R+T +++AT K V+K+ L NP ++ + V ++ Q + K L
Sbjct: 336 RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQ 395
Query: 246 ILTEMAESTSMVF----TRTCDS-TRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKS 300
IL + ++ R CD TR A I+G SQ +R LN+F+S
Sbjct: 396 ILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFG-----AAAIHGDKSQPERDNVLNQFRS 450
Query: 301 GECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL 355
G +L+ TDVA+RGLD+ + V+NYD P +DY+HR+GRT RAG +G A +
Sbjct: 451 GRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT3G01540.4 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 191/355 (53%), Gaps = 19/355 (5%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALP-IL 70
SF+ G P L+ G++ P IQA++ P+A+QG+D++ +A+TGSGKT + +P L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 71 HALLEAPRPNHFFA---CVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
H L+ R + V+SPTRELA QI E+ G + C L GG Q
Sbjct: 219 H--LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRD 276
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ + I+V TPGR+ D L+ + S ++ YLVLDEADR+L+ FE + +I++ IP +
Sbjct: 277 LERGADIVVATPGRLNDILEMRR-ISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTK 335
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTV--DTLKQQYRFLPAKHKDCYLVY 245
R+T +++AT K V+K+ L NP ++ + V ++ Q + K L
Sbjct: 336 RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQ 395
Query: 246 ILTEMAESTSMVF----TRTCDS-TRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKS 300
IL + ++ R CD TR A I+G SQ +R LN+F+S
Sbjct: 396 ILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFG-----AAAIHGDKSQPERDNVLNQFRS 450
Query: 301 GECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL 355
G +L+ TDVA+RGLD+ + V+NYD P +DY+HR+GRT RAG +G A +
Sbjct: 451 GRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT3G01540.3 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 191/355 (53%), Gaps = 19/355 (5%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALP-IL 70
SF+ G P L+ G++ P IQA++ P+A+QG+D++ +A+TGSGKT + +P L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 71 HALLEAPRPNHFFA---CVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
H L+ R + V+SPTRELA QI E+ G + C L GG Q
Sbjct: 219 H--LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRD 276
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ + I+V TPGR+ D L+ + S ++ YLVLDEADR+L+ FE + +I++ IP +
Sbjct: 277 LERGADIVVATPGRLNDILEMRR-ISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTK 335
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTV--DTLKQQYRFLPAKHKDCYLVY 245
R+T +++AT K V+K+ L NP ++ + V ++ Q + K L
Sbjct: 336 RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQ 395
Query: 246 ILTEMAESTSMVF----TRTCDS-TRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKS 300
IL + ++ R CD TR A I+G SQ +R LN+F+S
Sbjct: 396 ILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFG-----AAAIHGDKSQPERDNVLNQFRS 450
Query: 301 GECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL 355
G +L+ TDVA+RGLD+ + V+NYD P +DY+HR+GRT RAG +G A +
Sbjct: 451 GRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT3G01540.2 | Symbols: DRH1, ATDRH1 | DEAD box RNA helicase 1 |
chr3:213077-216142 REVERSE LENGTH=619
Length = 619
Score = 207 bits (526), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 191/355 (53%), Gaps = 19/355 (5%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALP-IL 70
SF+ G P L+ G++ P IQA++ P+A+QG+D++ +A+TGSGKT + +P L
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 71 HALLEAPRPNHFFA---CVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
H L+ R + V+SPTRELA QI E+ G + C L GG Q
Sbjct: 219 H--LQRIRNDSRMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPKGPQLRD 276
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ + I+V TPGR+ D L+ + S ++ YLVLDEADR+L+ FE + +I++ IP +
Sbjct: 277 LERGADIVVATPGRLNDILEMRR-ISLRQISYLVLDEADRMLDMGFEPQIRKIVKEIPTK 335
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTV--DTLKQQYRFLPAKHKDCYLVY 245
R+T +++AT K V+K+ L NP ++ + V ++ Q + K L
Sbjct: 336 RQTLMYTATWPKGVRKIAADLLVNPAQVNIGNVDELVANKSITQHIEVVAPMEKQRRLEQ 395
Query: 246 ILTEMAESTSMVF----TRTCDS-TRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKS 300
IL + ++ R CD TR A I+G SQ +R LN+F+S
Sbjct: 396 ILRSQEPGSKVIIFCSTKRMCDQLTRNLTRQFG-----AAAIHGDKSQPERDNVLNQFRS 450
Query: 301 GECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL 355
G +L+ TDVA+RGLD+ + V+NYD P +DY+HR+GRT RAG +G A +
Sbjct: 451 GRTPVLVATDVAARGLDVKDIRAVVNYDFPNGVEDYVHRIGRTGRAGATGQAFTF 505
>AT1G31970.1 | Symbols: STRS1 | DEA(D/H)-box RNA helicase family
protein | chr1:11479921-11482707 FORWARD LENGTH=537
Length = 537
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/362 (36%), Positives = 198/362 (54%), Gaps = 15/362 (4%)
Query: 3 EENEIEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKT 62
EE + K+F + LP+++++ C+ + P IQ+ P L G+D+IG+A+TGSGKT
Sbjct: 108 EEAKYAALKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKT 165
Query: 63 GAFALP-ILHALLE------APRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVL 115
AF +P I+H L + + + V+SPTRELA+QI++ G G+K +
Sbjct: 166 LAFGIPAIMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICV 225
Query: 116 VGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEE 175
GG Q I I++GTPGR+ D L + S + ++VLDEADR+L+ FEE
Sbjct: 226 YGGSSKGPQISAIRSGVDIVIGTPGRLRD-LIESNVLRLSDVSFVVLDEADRMLDMGFEE 284
Query: 176 SLNEILQAIPRERRTFLFSATMTKKVQKL-QRVCLRNPVKIEAAS-KYSTVDTLKQQYRF 233
+ IL + R+ +FSAT V KL Q NP+K+ S + + Q
Sbjct: 285 PVRFILSNTNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEV 344
Query: 234 LPAKHKDCYLVYILTEMAESTS---MVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSK 290
L + +D L+ +L + +S +VF KA+ I+G+ +QS+
Sbjct: 345 LDERARDQRLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSE 404
Query: 291 RLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSG 350
R +L+ FK G C +L+ TDVA+RGLDIP V++VINY P ++DY+HR+GRT RAG+ G
Sbjct: 405 RTRSLSLFKEGSCPLLVATDVAARGLDIPDVEVVINYTFPLTTEDYVHRIGRTGRAGKKG 464
Query: 351 VA 352
VA
Sbjct: 465 VA 466
>AT4G33370.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr4:16069669-16071405 REVERSE LENGTH=542
Length = 542
Score = 205 bits (522), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/369 (33%), Positives = 192/369 (52%), Gaps = 24/369 (6%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
K+F D+ P L+ + G P IQ + +P+ L G+D+IG+A TGSGKT F LP++
Sbjct: 97 KNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMI 156
Query: 71 HALL-----------EAPRPNHFFACVMSPTRELAIQ---IAEQFEALGSEIG---VKCA 113
L E P A V+ P+RELA Q + EQF A E G ++
Sbjct: 157 ILALQEEIMMPIAAGEGP-----IALVICPSRELAKQTYDVVEQFVASLVEDGYPRLRSL 211
Query: 114 VLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDF 173
+ +GG+DM Q + K HI+V TPGR+ D L K S + L LDEADRL++ F
Sbjct: 212 LCIGGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKK-MSLDACRLLTLDEADRLVDLGF 270
Query: 174 EESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRF 233
E+ + + +R+T LFSATM K+Q L PV + + + Q+ +
Sbjct: 271 EDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAGAANLDVIQEVEY 330
Query: 234 LPAKHKDCYLVYILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLG 293
+ + K YL+ L + ++F +A+ I+G Q R
Sbjct: 331 VKQEAKIVYLLECLQKTTPPV-LIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDRDY 389
Query: 294 ALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAI 353
A++ FK+G+ ++L+ TDVAS+GLD P + VINYD+P ++Y+HR+GRT R G++G+A
Sbjct: 390 AISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYVHRIGRTGRCGKTGIAT 449
Query: 354 SLVNQYELE 362
+ +N+ + E
Sbjct: 450 TFINKNQSE 458
>AT3G22310.1 | Symbols: PMH1, ATRH9 | putative mitochondrial RNA
helicase 1 | chr3:7887382-7889806 FORWARD LENGTH=610
Length = 610
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 126/380 (33%), Positives = 210/380 (55%), Gaps = 13/380 (3%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILH 71
+ DLG+ +V+A + G IQ + A++G+D+IG A+TG+GKT AF +PI+
Sbjct: 117 AIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIID 176
Query: 72 ALLE----APRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+++ R + V++PTRELA Q+ ++F + C L GG + QQ +
Sbjct: 177 KIIKFNAKHGRGKNPQCLVLAPTRELARQVEKEFRESAPSLDTIC--LYGGTPIGQQMRE 234
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ + VGTPGR++D +K + S ++++VLDEAD++L F E + ILQ +P +
Sbjct: 235 LNYGIDVAVGTPGRIIDLMKR-GALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAK 293
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIE--AASKYSTVDTLKQQYRFLPAKHKDCYLVY 245
R++ +FSATM ++ L + L NP+ I+ S D + + + +
Sbjct: 294 RQSMMFSATMPSWIRSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGP 353
Query: 246 ILTEMAESTS-MVFTRTC-DSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGEC 303
++ E + +VFT+T D+ R +A+ +G +SQ++R L F+ G
Sbjct: 354 LVKEHGKGGKCIVFTQTKRDADRLAFGLAKSYKCEAL--HGDISQAQRERTLAGFRDGNF 411
Query: 304 NILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 363
+IL+ TDVA+RGLD+P VD+VI+Y++P N++ ++HR GRT RAG+ G AI + Q +
Sbjct: 412 SILVATDVAARGLDVPNVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRA 471
Query: 364 YIQIEKLIGKKLPEYPARAC 383
IEK +G + E P+ A
Sbjct: 472 VKMIEKEVGSRFNELPSIAV 491
>AT3G19760.1 | Symbols: EIF4A-III | eukaryotic initiation factor
4A-III | chr3:6863790-6866242 FORWARD LENGTH=408
Length = 408
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 117/383 (30%), Positives = 203/383 (53%), Gaps = 10/383 (2%)
Query: 1 MEEENEIEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSG 60
E + IE SF D+G+ + ++ + G+ P IQ A+ LQG+DVI AQ+G+G
Sbjct: 25 FETTDGIEPITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTG 84
Query: 61 KTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGID 120
KT AL + + + R A ++SPTRELA Q + +A+G ++ +GG
Sbjct: 85 KTSMIALSVCQVVDTSSREVQ--ALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNS 142
Query: 121 MVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEI 180
+ + K+ H++ GTPGRV D +K + +K L+LDE+D +L+ F++ + ++
Sbjct: 143 VGEDIRKLEHGVHVVSGTPGRVCDMIKR-RSLRTRAIKLLILDESDEMLSRGFKDQIYDV 201
Query: 181 LQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKD 240
+ +P + + L SAT+ ++ ++ + PVKI T++ +KQ F A K+
Sbjct: 202 YRYLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQ---FFVAVEKE 258
Query: 241 CYLVYILTEMAESTSM----VFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALN 296
+ L ++ ++ ++ +F T ++G M Q +R +N
Sbjct: 259 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMN 318
Query: 297 KFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV 356
+F+SG+ +L+ TDV +RG+D+ V +VINYD+P N + YIHR+GR+ R GR GVAI+ V
Sbjct: 319 EFRSGDSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFV 378
Query: 357 NQYELEWYIQIEKLIGKKLPEYP 379
+++ IE+ ++ E P
Sbjct: 379 KSDDIKILRDIEQYYSTQIDEMP 401
>AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594094 REVERSE
LENGTH=402
Length = 402
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 195/374 (52%), Gaps = 4/374 (1%)
Query: 8 EVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFAL 67
+V +SF +GL ++L+ G+ P IQ I +G DVI AQ+G+GKT F
Sbjct: 26 DVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 85
Query: 68 PILHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+L L + A V++PTRELA QI + ALG +GVK VGG + +
Sbjct: 86 GVLQQLDFSLIQCQ--ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 143
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ H++VGTPGRV D LK + +K VLDEAD +L+ F++ + +I Q +P +
Sbjct: 144 LQAGVHVVVGTPGRVFDMLKR-QSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 202
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYIL 247
+ +FSATM + ++ R + PV+I T++ +KQ Y + + + L
Sbjct: 203 IQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDL 262
Query: 248 TE-MAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNIL 306
E +A + S++F T +G M Q+ R + +F+SG +L
Sbjct: 263 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 322
Query: 307 LCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQ 366
+ TD+ +RG+D+ V +VIN+D+PT ++Y+HR+GR+ R GR GVAI+ V + +
Sbjct: 323 ITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFD 382
Query: 367 IEKLIGKKLPEYPA 380
I+K + E P+
Sbjct: 383 IQKFYNVVVEELPS 396
>AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592635-4594128 REVERSE
LENGTH=412
Length = 412
Score = 198 bits (504), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 195/374 (52%), Gaps = 4/374 (1%)
Query: 8 EVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFAL 67
+V +SF +GL ++L+ G+ P IQ I +G DVI AQ+G+GKT F
Sbjct: 36 DVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
Query: 68 PILHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+L L + A V++PTRELA QI + ALG +GVK VGG + +
Sbjct: 96 GVLQQLDFSLIQCQ--ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 153
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ H++VGTPGRV D LK + +K VLDEAD +L+ F++ + +I Q +P +
Sbjct: 154 LQAGVHVVVGTPGRVFDMLKR-QSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 212
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYIL 247
+ +FSATM + ++ R + PV+I T++ +KQ Y + + + L
Sbjct: 213 IQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDL 272
Query: 248 TE-MAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNIL 306
E +A + S++F T +G M Q+ R + +F+SG +L
Sbjct: 273 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 332
Query: 307 LCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQ 366
+ TD+ +RG+D+ V +VIN+D+PT ++Y+HR+GR+ R GR GVAI+ V + +
Sbjct: 333 ITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFD 392
Query: 367 IEKLIGKKLPEYPA 380
I+K + E P+
Sbjct: 393 IQKFYNVVVEELPS 406
>AT5G14610.1 | Symbols: | DEAD box RNA helicase family protein |
chr5:4711271-4714713 FORWARD LENGTH=712
Length = 712
Score = 198 bits (503), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 121/336 (36%), Positives = 184/336 (54%), Gaps = 17/336 (5%)
Query: 30 GWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEAPRPNHFFAC--VM 87
G++ P IQA++ P+A+Q +D++ +A+TGSGKT + +P L + V+
Sbjct: 248 GFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHLQRIHNDSRMGPTILVL 307
Query: 88 SPTRELAIQIAEQFEAL--GSEIGVKCAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDH 145
SPTRELA QI Q EAL G + CA L GG Q +I + I+V TPGR+ D
Sbjct: 308 SPTRELATQI--QVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDI 365
Query: 146 LKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTFLFSATMTKKVQKLQ 205
L+ K S ++ YLVLDEADR+L+ FE + +I+ +P +R+T +++AT K+V+K+
Sbjct: 366 LE-MKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKEVRKIA 424
Query: 206 RVCLRNPVKIEAASKYSTV--DTLKQQYRFLPAKHKDCYLVYILTEMAESTSMVF----T 259
L NP ++ + V ++ Q L K L IL + ++
Sbjct: 425 ADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRSQEPGSKIIIFCSTK 484
Query: 260 RTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIP 319
R CD A I+G SQ++R LN+F+SG +L+ TDVA+RGLD+
Sbjct: 485 RMCDQ----LARNLTRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVATDVAARGLDVK 540
Query: 320 TVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL 355
+ +V+NYD P +DY+HR+GRT RAG +G+A +
Sbjct: 541 DIRVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTF 576
>AT1G51380.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:19047960-19049967 FORWARD LENGTH=392
Length = 392
Score = 197 bits (502), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 199/371 (53%), Gaps = 4/371 (1%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
KSF D+G+ D ++ G+ P +IQ A+ L+G+DVI AQ+G+GKT A+ +
Sbjct: 22 KSFDDMGMNDKVLRGVYDYGYKKPSEIQQRALVPILKGRDVIAQAQSGTGKTSMIAISVC 81
Query: 71 HALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAK 130
+ + R V+SP+RELA Q + +A+G+ ++ +GG + + K+ +
Sbjct: 82 QIVNISSRKVQVL--VLSPSRELASQTEKTIQAIGAHTNIQAHACIGGKSIGEDIKKLER 139
Query: 131 QPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRT 190
H + GTPGRV D +K +K LVLDE+D +L++ ++ + ++ +A+P + +
Sbjct: 140 GVHAVSGTPGRVYDMIKRG-SLQTKAVKLLVLDESDEMLSKGLKDQIYDVYRALPHDIQV 198
Query: 191 FLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKH-KDCYLVYILTE 249
L SAT+ +++ ++ + +PV+I T++ +KQ Y + + K L +
Sbjct: 199 CLISATLPQEILEMTEKFMTDPVRILVKPDELTLEGIKQYYVDVDKEEWKFDTLCDLYGR 258
Query: 250 MAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCT 309
+ + +++F T ++G Q +R +N+F+S + +L+ +
Sbjct: 259 LTINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKERDDIMNQFRSFKSRVLIAS 318
Query: 310 DVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEK 369
DV +RG+D+ TV VINYDIP N + YIHR+GR R GR GVAI+ V +++ IE+
Sbjct: 319 DVWARGIDVQTVSHVINYDIPNNPELYIHRIGRAGRFGREGVAINFVKSSDMKDLKDIER 378
Query: 370 LIGKKLPEYPA 380
G K+ E PA
Sbjct: 379 HYGTKIREMPA 389
>AT5G54910.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr5:22298668-22301719 REVERSE LENGTH=739
Length = 739
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 198/375 (52%), Gaps = 15/375 (4%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
+ F L + D + + +Q+ AIP AL G+D++G A+TGSGKT AF +PIL
Sbjct: 71 RKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPIL 130
Query: 71 HAL-LEAPRPNHFFACVM-SPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKI 128
L E P C++ SPTRELA Q +G +L+GG + V +
Sbjct: 131 EKLHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKER 190
Query: 129 AKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRER 188
+ +I+V PGR+L H+ T F +L+ L+LDEADR+L+ F+ L+ I+ +P+ R
Sbjct: 191 VHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHR 250
Query: 189 RTFLFSATMTKKVQKLQRVCLRNP--VKIEAASKYSTVDTLKQQYRFLPAKHK-DCYLVY 245
+T LFSAT TKKV+ L R+ LR+P + + A + +T +L Q +P + K D +
Sbjct: 251 QTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSF 310
Query: 246 ILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIP---INGHMSQSKRLGALNKFKSGE 302
I T + S +VF T + IP ++G MSQ KR+G ++F +
Sbjct: 311 IKTHL-NSRILVFLSTKKQVKFVHEAFNKLRP-GIPLKSLHGKMSQEKRMGVYSQFIERQ 368
Query: 303 CNILLCTDVASRGLDI-PTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEL 361
++L CTDV +RGLD VD V+ D P + YIHRVGRTAR G ++ + E
Sbjct: 369 -SVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEE 427
Query: 362 EWYIQIEKLIGKKLP 376
+ IEKL K+P
Sbjct: 428 KM---IEKLQEAKVP 439
>AT1G54270.1 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=412
Length = 412
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 197/381 (51%), Gaps = 18/381 (4%)
Query: 8 EVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFAL 67
EV +SF +GL ++L+ G+ P IQ I +G DVI AQ+G+GKT F
Sbjct: 36 EVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
Query: 68 PIL----HALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQ 123
+L +ALL+ A V++PTRELA QI + ALG GVK VGG + +
Sbjct: 96 GVLQQLDYALLQCQ------ALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVRE 149
Query: 124 QSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQA 183
+ H++VGTPGRV D L+ + +K VLDEAD +L+ F++ + +I Q
Sbjct: 150 DQRILQAGVHVVVGTPGRVFDMLRR-QSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQL 208
Query: 184 IPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYL 243
+P + + +FSATM + ++ R + PV+I T++ +KQ F K+ +
Sbjct: 209 LPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQ---FYVNVEKEDWK 265
Query: 244 VYILTEMAES----TSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFK 299
+ L ++ E+ S++F T +G M Q+ R + +F+
Sbjct: 266 LETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 325
Query: 300 SGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQY 359
SG +L+ TD+ +RG+D+ V +VIN+D+PT ++Y+HR+GR+ R GR GVAI+ V
Sbjct: 326 SGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLD 385
Query: 360 ELEWYIQIEKLIGKKLPEYPA 380
+ I+K + E P+
Sbjct: 386 DQRMLFDIQKFYNVVVEELPS 406
>AT5G11170.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3553334-3556646 FORWARD LENGTH=427
Length = 427
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 198/381 (51%), Gaps = 21/381 (5%)
Query: 10 SKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPI 69
S F+D L L+ A G+ P ++Q E IP A+ G DVI A++G GKT F L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 70 LHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEI-GVKCAVLVGGIDM-VQQSIK 127
L + P P A V+ TRELA QI +F + + K +V GG+++ + + +
Sbjct: 105 LQQI--EPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNE-DFEESLNEILQAIPR 186
+ PHI+VGTPGRVL L K S +++ +LDE D++L D + EI + P
Sbjct: 163 KNECPHIVVGTPGRVL-ALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 187 ERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYS-TVDTLKQQYRFLPAKHKDCYLVY 245
+++ +FSAT++K+++ + + +++P++I + T+ L Q Y L K+ L
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 281
Query: 246 ILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNI 305
+L + + ++F ++ +I I+ MSQ +RL FK G I
Sbjct: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 306 LLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV--------- 356
L+ TD+ RG+DI V++VINYD+P ++ Y+HRVGR R G G+AI+ V
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVL 401
Query: 357 NQYELEWYIQIEKLIGKKLPE 377
NQ + + + I K+LPE
Sbjct: 402 NQVQERFEVDI-----KELPE 417
>AT5G11200.1 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=427
Length = 427
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 124/381 (32%), Positives = 198/381 (51%), Gaps = 21/381 (5%)
Query: 10 SKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPI 69
S F+D L L+ A G+ P ++Q E IP A+ G DVI A++G GKT F L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 70 LHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEI-GVKCAVLVGGIDM-VQQSIK 127
L + P P A V+ TRELA QI +F + + K +V GG+++ + + +
Sbjct: 105 LQQI--EPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNE-DFEESLNEILQAIPR 186
+ PHI+VGTPGRVL L K S +++ +LDE D++L D + EI + P
Sbjct: 163 KNECPHIVVGTPGRVL-ALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 187 ERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYS-TVDTLKQQYRFLPAKHKDCYLVY 245
+++ +FSAT++K+++ + + +++P++I + T+ L Q Y L K+ L
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLND 281
Query: 246 ILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNI 305
+L + + ++F ++ +I I+ MSQ +RL FK G I
Sbjct: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 306 LLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV--------- 356
L+ TD+ RG+DI V++VINYD+P ++ Y+HRVGR R G G+AI+ V
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVL 401
Query: 357 NQYELEWYIQIEKLIGKKLPE 377
NQ + + + I K+LPE
Sbjct: 402 NQVQERFEVDI-----KELPE 417
>AT3G13920.4 | Symbols: EIF4A1 | eukaryotic translation initiation
factor 4A1 | chr3:4592635-4594128 REVERSE LENGTH=407
Length = 407
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 195/374 (52%), Gaps = 9/374 (2%)
Query: 8 EVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFAL 67
+V +SF +GL ++L+ EK P IQ I +G DVI AQ+G+GKT F
Sbjct: 36 DVHESFDAMGLQENLLRGFEK-----PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 90
Query: 68 PILHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+L L + A V++PTRELA QI + ALG +GVK VGG + +
Sbjct: 91 GVLQQLDFSLIQCQ--ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 148
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ H++VGTPGRV D LK + +K VLDEAD +L+ F++ + +I Q +P +
Sbjct: 149 LQAGVHVVVGTPGRVFDMLKR-QSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 207
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYIL 247
+ +FSATM + ++ R + PV+I T++ +KQ Y + + + L
Sbjct: 208 IQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDL 267
Query: 248 TE-MAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNIL 306
E +A + S++F T +G M Q+ R + +F+SG +L
Sbjct: 268 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 327
Query: 307 LCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQ 366
+ TD+ +RG+D+ V +VIN+D+PT ++Y+HR+GR+ R GR GVAI+ V + +
Sbjct: 328 ITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFD 387
Query: 367 IEKLIGKKLPEYPA 380
I+K + E P+
Sbjct: 388 IQKFYNVVVEELPS 401
>AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | eukaryotic translation
initiation factor 4A1 | chr3:4592586-4594128 REVERSE
LENGTH=415
Length = 415
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 118/352 (33%), Positives = 187/352 (53%), Gaps = 4/352 (1%)
Query: 8 EVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFAL 67
+V +SF +GL ++L+ G+ P IQ I +G DVI AQ+G+GKT F
Sbjct: 36 DVHESFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 95
Query: 68 PILHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+L L + A V++PTRELA QI + ALG +GVK VGG + +
Sbjct: 96 GVLQQLDFSLIQCQ--ALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRI 153
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ H++VGTPGRV D LK + +K VLDEAD +L+ F++ + +I Q +P +
Sbjct: 154 LQAGVHVVVGTPGRVFDMLKR-QSLRADNIKMFVLDEADEMLSRGFKDQIYDIFQLLPPK 212
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYIL 247
+ +FSATM + ++ R + PV+I T++ +KQ Y + + + L
Sbjct: 213 IQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQFYVNVEKEEWKLETLCDL 272
Query: 248 TE-MAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNIL 306
E +A + S++F T +G M Q+ R + +F+SG +L
Sbjct: 273 YETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVL 332
Query: 307 LCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQ 358
+ TD+ +RG+D+ V +VIN+D+PT ++Y+HR+GR+ R GR GVAI+ V +
Sbjct: 333 ITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTR 384
>AT5G26742.3 | Symbols: emb1138 | DEAD box RNA helicase (RH3) |
chr5:9285540-9288618 REVERSE LENGTH=655
Length = 655
Score = 193 bits (491), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/349 (34%), Positives = 194/349 (55%), Gaps = 18/349 (5%)
Query: 36 KIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEAPRPNHFFA--------CVM 87
++A +P ALQG+D+I A+TG+GKT AF +PI+ L E F V+
Sbjct: 35 NVRAVLVP-ALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVL 93
Query: 88 SPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLK 147
+PTRELA Q+ ++ + + C + GG+ Q + + ++VGTPGR++D ++
Sbjct: 94 APTRELAKQVEKEIKESAPYLSTVC--VYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIE 151
Query: 148 NTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTFLFSATMTKKVQKLQRV 207
+ ++YLVLDEAD++L FEE++ IL+ +P +R++ LFSATM V+KL R
Sbjct: 152 G-RSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARK 210
Query: 208 CLRNPVKIEAASKYST--VDTLKQQYRFLPAKHKDCYLVYILTEMAES-TSMVFTRTC-D 263
L NP+ I+ + +K + K L ++T A+ ++VFT+T D
Sbjct: 211 YLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRD 270
Query: 264 STRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDM 323
+ +A+ +G +SQ +R LN F+ G+ +L+ TDVASRGLDIP VD+
Sbjct: 271 ADEVSLALSNSIATEAL--HGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDL 328
Query: 324 VINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIG 372
VI+Y++P + + ++HR GRT RAG+ G AI + + +E+ +G
Sbjct: 329 VIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVG 377
>AT1G54270.2 | Symbols: EIF4A-2 | eif4a-2 | chr1:20260495-20262018
FORWARD LENGTH=407
Length = 407
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/381 (32%), Positives = 197/381 (51%), Gaps = 23/381 (6%)
Query: 8 EVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFAL 67
EV +SF +GL ++L+ EK P IQ I +G DVI AQ+G+GKT F
Sbjct: 36 EVHESFDAMGLQENLLRGFEK-----PSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCS 90
Query: 68 PIL----HALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQ 123
+L +ALL+ A V++PTRELA QI + ALG GVK VGG + +
Sbjct: 91 GVLQQLDYALLQCQ------ALVLAPTRELAQQIEKVMRALGDYQGVKVHACVGGTSVRE 144
Query: 124 QSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQA 183
+ H++VGTPGRV D L+ + +K VLDEAD +L+ F++ + +I Q
Sbjct: 145 DQRILQAGVHVVVGTPGRVFDMLRR-QSLRPDCIKMFVLDEADEMLSRGFKDQIYDIFQL 203
Query: 184 IPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYL 243
+P + + +FSATM + ++ R + PV+I T++ +KQ F K+ +
Sbjct: 204 LPPKIQVGVFSATMPPEALEITRKFMSKPVRILVKRDELTLEGIKQ---FYVNVEKEDWK 260
Query: 244 VYILTEMAES----TSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFK 299
+ L ++ E+ S++F T +G M Q+ R + +F+
Sbjct: 261 LETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFR 320
Query: 300 SGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQY 359
SG +L+ TD+ +RG+D+ V +VIN+D+PT ++Y+HR+GR+ R GR GVAI+ V
Sbjct: 321 SGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLD 380
Query: 360 ELEWYIQIEKLIGKKLPEYPA 380
+ I+K + E P+
Sbjct: 381 DQRMLFDIQKFYNVVVEELPS 401
>AT1G28180.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr1:9843084-9845002
REVERSE LENGTH=614
Length = 614
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 183/348 (52%), Gaps = 29/348 (8%)
Query: 34 PLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEAP------RPNHFFACVM 87
P++ E IPL L+ +DVIG++ TGSGKT AF LP+L + P + +A VM
Sbjct: 225 PMRNWEETIPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPMREENQTEGPYALVM 284
Query: 88 SPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLK 147
PTRELA QI E+ +G K + G + +Q++K+++ I++ TPGR+LD L+
Sbjct: 285 VPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLE 344
Query: 148 NTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE-----------------RRT 190
+ ++ YLVLDEADR+++ DFE ++E+L +P R T
Sbjct: 345 R-RYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKIYRTT 403
Query: 191 FLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEM 250
++FSATM V++L R LRNPV + T + QQ K L ++ ++
Sbjct: 404 YMFSATMLLSVERLARKFLRNPVVVTIGE---TTKFITQQVIMTKESDKFSRLKKLIDDL 460
Query: 251 AES-TSMVFTRTCDSTRXXXXXXXXXXX-KAIPINGHMSQSKRLGALNKFKSGECNILLC 308
+ T++VF T + + ++ SQ +R +L +FK N+L+
Sbjct: 461 GDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVT 520
Query: 309 TDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLV 356
TDV RGLDI + VINYD+P Y HR+GRT RAG++GVA + +
Sbjct: 521 TDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFL 568
>AT1G72730.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:27378040-27379593 REVERSE LENGTH=414
Length = 414
Score = 191 bits (485), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 191/377 (50%), Gaps = 4/377 (1%)
Query: 5 NEIEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGA 64
N EV SF + L L+ G+ P IQ I +G DVI AQ+G+GKT
Sbjct: 35 NYDEVCDSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTAT 94
Query: 65 FALPILHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQ 124
F +L L + A V++PTRELA QI + ALG +GVK VGG + +
Sbjct: 95 FCSGVLQQLDISLVQCQ--ALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVRED 152
Query: 125 SIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAI 184
+ H++VGTPGRV D L+ + +K VLDEAD +L+ F++ + +I Q +
Sbjct: 153 QRVLQSGVHVVVGTPGRVFDLLRR-QSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLL 211
Query: 185 PRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLV 244
P + + +FSATM + ++ R + PV+I T++ +KQ Y + + +
Sbjct: 212 PSKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETL 271
Query: 245 YILTE-MAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGEC 303
L E +A + S++F T +G M Q+ R + +F+SG
Sbjct: 272 CDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSS 331
Query: 304 NILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 363
+L+ TD+ +RG+D+ V +VIN+D+PT ++Y+HR+GR+ R GR GVAI+ + +
Sbjct: 332 RVLITTDLLARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERM 391
Query: 364 YIQIEKLIGKKLPEYPA 380
I++ + E P+
Sbjct: 392 MADIQRFYNVVVEELPS 408
>AT5G63120.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25319798-25322071
REVERSE LENGTH=484
Length = 484
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/311 (36%), Positives = 176/311 (56%), Gaps = 6/311 (1%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
K F+D PD+++EA KLG+T P IQA+ P+AL+G+D+IG+A+TGSGKT A+ LP L
Sbjct: 165 KMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPAL 224
Query: 71 HALLEAPR---PNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIK 127
+ PR + +++PTRELA+QI E+ G GV+ + GG Q
Sbjct: 225 VHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRD 284
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRE 187
+ + I++ TPGR++D L+ + + R+ YLVLDEADR+L+ FE + +I+ I +
Sbjct: 285 LRRGVEIVIATPGRLIDMLE-CQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPD 343
Query: 188 RRTFLFSATMTKKVQKLQRVCLRNPVK-IEAASKYSTVDTLKQQYRFLPAKHKDCYLVYI 246
R+T L+SAT ++V+ L R LR+P K I ++ ++ Q +P K L+ +
Sbjct: 344 RQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTL 403
Query: 247 LTEMAESTS-MVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNI 305
L ++ + + ++F T A+ I+G +QS+R L +FKSG I
Sbjct: 404 LKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPI 463
Query: 306 LLCTDVASRGL 316
+ TDVA+RGL
Sbjct: 464 MTATDVAARGL 474
>AT5G08620.1 | Symbols: STRS2, ATRH25 | DEA(D/H)-box RNA helicase
family protein | chr5:2794540-2797548 FORWARD LENGTH=563
Length = 563
Score = 187 bits (476), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 201/377 (53%), Gaps = 32/377 (8%)
Query: 13 FKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHA 72
F L ++ E G+ T +Q +PL LQGKD++ A+TG+GKT AF LP + A
Sbjct: 82 FDQFPLSPLTLKGIEDAGFKTMTVVQEATLPLILQGKDILAKAKTGTGKTVAFLLPSIEA 141
Query: 73 LLEAP---RPNH---FFACVMSPTRELAIQIAEQFEAL---GSEIGVKCAVLVGGIDMVQ 123
+++AP R N V+ PTRELA Q A + L IGV+ V++GG +
Sbjct: 142 VIKAPPASRDNRHPPIIVLVVCPTRELACQAAAEANILLKYHPSIGVQ--VVIGGTKLPT 199
Query: 124 QSIKIAKQP-HIIVGTPGRVLDHLKNTKGFSFSRL---KYLVLDEADRLLNEDFEESLNE 179
+ ++ K P I+V TPGR+ DH+ NT GF+ +RL K LVLDEAD LL+ F +
Sbjct: 200 EQRRLQKSPCQILVATPGRLKDHIDNTSGFA-TRLMGVKVLVLDEADHLLDMGFRREIER 258
Query: 180 ILQAIPRERRTFLFSATMTKKVQKLQRVCLR------NPVKIEAASKYSTVDTLKQQYRF 233
I+ A+P++R+TFLFSAT++ +V+++ V L+ N V+ A + V Q
Sbjct: 259 IIAAVPKQRQTFLFSATVSDEVRQICHVALKRDHEFVNCVQEGAGETHQKV----SQMYM 314
Query: 234 LPAKHKDCYLVYIL-----TEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQ 288
+ + + L+Y L T+ ++F T TR I+ Q
Sbjct: 315 IASLDRHFSLLYGLLKKHITDNVGYKVIIFCTTAMVTRLVADLLGKLSLNVREIHSRKPQ 374
Query: 289 SKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGR 348
S R ++F+ + IL+ +DV++RG+D P V +V+ +P++ + YIHR+GRT R G+
Sbjct: 375 SYRTRVSDEFRKSKSIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGK 434
Query: 349 SGVAISLVNQYELEWYI 365
G + L+ +E E+++
Sbjct: 435 EGEGVLLLAPWE-EYFL 450
>AT2G40700.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr2:16976783-16979392
FORWARD LENGTH=609
Length = 609
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 208/447 (46%), Gaps = 80/447 (17%)
Query: 12 SFKDLGLPDSLVEAC-EKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
SF LGL L + E++G+ P +QA+AIP+ L G+DV+ A TG+GKT A+ P++
Sbjct: 30 SFSSLGLDTKLSDQLKERMGFEAPTLVQAQAIPVILSGRDVLVNAPTGTGKTIAYLAPLI 89
Query: 71 HALL----EAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIG-VKCAVLVGGIDMVQQS 125
H L + R + FA V+ PTREL +Q+ E E L + ++GG ++
Sbjct: 90 HHLQGHSPKVDRSHGTFALVIVPTRELCLQVYETLEKLLHRFHWIVPGYVMGGEKKAKEK 149
Query: 126 IKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQ--- 182
++ K I++ TPGR+LDHLKNT F L++++ DEAD +L + + + +I++
Sbjct: 150 ARLRKGISILIATPGRLLDHLKNTASFVHKNLRWVIFDEADSILELGYGKEIEQIIKLLG 209
Query: 183 -----------AIPR--ERRTFLFSATMTKKVQKLQRVCLRNPVKI-------------- 215
+P+ +++ L SAT+ KV L ++ L +PV I
Sbjct: 210 SGQNEQGEEDDIVPKGIQKQNLLLSATLNDKVNDLAKLSLDDPVMIGLDNTKLQQNLSIE 269
Query: 216 ---------------------EAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAEST 254
+ Y L Q+Y +P + L+ +L + E
Sbjct: 270 SPAAPDSDAEDMVIHVNKSANPLSEDYGIPSQLVQRYLRVPCGARLVALLSVLKNLFERE 329
Query: 255 S----MVFTRTCDS------------------TRXXXXXXXXXXXKAIPINGHMSQSKRL 292
+ +VF T D+ T K ++G M Q R
Sbjct: 330 ASQKVVVFFSTRDAVDFHYSLLSEFQWPPNSETEEEGTKELFLKCKTFRLHGSMEQEDRR 389
Query: 293 GALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVA 352
A FK+ + +LL TDVA+RGLD P V +I YD P + +Y+HRVGRTAR G G A
Sbjct: 390 SAFGTFKTEKQAVLLSTDVAARGLDFPKVRCIIQYDCPGEATEYVHRVGRTARIGEKGEA 449
Query: 353 ISLVNQYELEWYIQIEKLIGKKLPEYP 379
+ + E+++ +++K G L EYP
Sbjct: 450 LLFLQPIEIDYLKELKKH-GASLTEYP 475
>AT5G63630.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:25472598-25476402
REVERSE LENGTH=788
Length = 788
Score = 185 bits (470), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 121/362 (33%), Positives = 199/362 (54%), Gaps = 22/362 (6%)
Query: 23 VEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEAP--RPN 80
++A + G+ T +Q +P+ L+GKDV+ A+TG+GKT AF LP + ++++P P+
Sbjct: 332 LKAIKDAGYETMTVVQEATLPIILKGKDVLAKAKTGTGKTVAFLLPSIEVVVKSPPTSPD 391
Query: 81 H----FFACVMSPTRELAIQIAEQFEAL---GSEIGVKCAVLVGGIDMVQQSIKIAKQP- 132
+ A V+ PTRELA Q A + L IGV+ V++GG + + ++ P
Sbjct: 392 NKRPPILALVICPTRELANQAATEANTLLKYHPSIGVQ--VVIGGTRLGLEQKRMQTNPC 449
Query: 133 HIIVGTPGRVLDHLKNTKGFS--FSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRT 190
I+V TPGR+ DH++NT GF+ +K LVLDEAD LL+ F + + I+ A+P+ER+T
Sbjct: 450 QILVATPGRLKDHIENTPGFATRLKGVKVLVLDEADHLLDMGFRKDIERIISAVPKERQT 509
Query: 191 FLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQ--QYRFLPAKHKDCYLVYILT 248
FLFSAT+ ++V+++ V LR + T++T +Q Q + + + L+Y L
Sbjct: 510 FLFSATVPEEVRQICLVALRRDHEFVNCVHEGTIETHQQVRQMHMIASLDRHFSLLYTLL 569
Query: 249 E-----MAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGEC 303
+ +VF T T+ I+ QS R N+F+ +
Sbjct: 570 REHIMGNVDYKVIVFCTTAMVTKLVADLLGELNLNVREIHSRKPQSYRTRVSNEFRKSKG 629
Query: 304 NILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEW 363
IL+ +DV++RG+D P V +V+ +P + + YIHR+GRT R G+ G I L+ +E E+
Sbjct: 630 LILVTSDVSARGVDYPDVTLVLQVGLPKDREQYIHRLGRTGRKGKEGEGILLLAPWE-EY 688
Query: 364 YI 365
++
Sbjct: 689 FL 690
>AT5G08610.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:2790341-2794059
FORWARD LENGTH=850
Length = 850
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 120/377 (31%), Positives = 204/377 (54%), Gaps = 23/377 (6%)
Query: 23 VEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEAP----- 77
++A + G+ T +Q +P+ LQGKDV+ A+TG+GKT AF LP + A++++P
Sbjct: 394 LKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEAVIKSPPASRD 453
Query: 78 -RPNHFFACVMSPTRELAIQIAEQFEAL---GSEIGVKCAVLVGGIDMVQQSIKIAKQP- 132
R V+ PTRELA Q A + L IGV+ V++GG + + ++ P
Sbjct: 454 SRQPPIIVLVVCPTRELASQAAAEANTLLKYHPSIGVQ--VVIGGTKLPTEQRRMQTNPC 511
Query: 133 HIIVGTPGRVLDHLKNTKGFSFSRL---KYLVLDEADRLLNEDFEESLNEILQAIPRERR 189
I+V TPGR+ DH++NT GF+ +RL K LVLDEAD LL+ F + I+ A+P++R+
Sbjct: 512 QILVATPGRLKDHIENTSGFA-TRLMGVKVLVLDEADHLLDMGFRRDIERIIAAVPKQRQ 570
Query: 190 TFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQ--QYRFLPAKHKDCYLVYIL 247
TFLFSAT+ ++V+++ V L+ + + + +T ++ Q + + + L+++L
Sbjct: 571 TFLFSATVPEEVRQICHVALKRDHEFINCVQEGSGETHQKVTQMYMIASLDRHFSLLHVL 630
Query: 248 -----TEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGE 302
+ + ++F T TR I+ QS R ++F+ +
Sbjct: 631 LKEHIADNVDYKVIIFCTTAMVTRLVADLLSQLSLNVREIHSRKPQSYRTRVSDEFRKSK 690
Query: 303 CNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELE 362
IL+ +DV++RG+D P V +V+ +P++ + YIHR+GRT R G+ G + L+ +E
Sbjct: 691 AIILVTSDVSARGVDYPDVSLVVQMGLPSDREQYIHRLGRTGRKGKEGEGVLLLAPWEEY 750
Query: 363 WYIQIEKLIGKKLPEYP 379
+ ++ L K P P
Sbjct: 751 FMSSVKDLPITKSPLPP 767
>AT5G11200.3 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=468
Length = 468
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 127/422 (30%), Positives = 196/422 (46%), Gaps = 62/422 (14%)
Query: 10 SKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPI 69
S F+D L L+ A G+ P ++Q E IP A+ G DVI A++G GKT F L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 70 LHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEI-GVKCAVLVGGIDM-VQQSIK 127
L + P P A V+ TRELA QI +F + + K +V GG+++ + + +
Sbjct: 105 LQQI--EPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNE-DFEESLNEILQAIPR 186
+ PHI+VGTPGRVL L K S +++ +LDE D++L D + EI + P
Sbjct: 163 KNECPHIVVGTPGRVL-ALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 187 ERRTFLFSATMTKKVQKL------------------------------------QRVCLR 210
+++ +FSAT++K+++ + R+ L
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDGLRTLSGDSVALWWVGFGSGYCVFPRFHRARMGLN 281
Query: 211 NPVKIEAASKYS------TVDTLKQQYRFLPAKHKDCYLVYILTEMAESTSMVFTRTCDS 264
P I+ Y T+ L Q Y L K+ L +L + + ++F ++
Sbjct: 282 VPSNIDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSR 341
Query: 265 TRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMV 324
+I I+ MSQ +RL FK G IL+ TD+ RG+DI V++V
Sbjct: 342 AAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIV 401
Query: 325 INYDIPTNSKDYIHRVGRTARAGRSGVAISLV---------NQYELEWYIQIEKLIGKKL 375
INYD+P ++ Y+HRVGR R G G+AI+ V NQ + + + I K+L
Sbjct: 402 INYDMPDSADTYLHRVGRAGRFGTKGLAITFVASASDSEVLNQVQERFEVDI-----KEL 456
Query: 376 PE 377
PE
Sbjct: 457 PE 458
>AT3G02065.3 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 187/363 (51%), Gaps = 13/363 (3%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL- 70
+F GLP L+ E G+ P IQ +AIP AL GK ++ A TGSGKT +F +PI+
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 71 -----HALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQS 125
H+ + + + A V++PTREL +Q+ +Q + LG + K A++VGG M Q
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 126 IKIAKQPHIIVGTPGRVLDHL-KNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAI 184
+I + +I+GTPGRV+D L K+T + VLDE D +L F + + +I QA+
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHT--IELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL 288
Query: 185 PRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLV 244
+ + LFSAT++++V+K+ + + + + + Q ++ AK K L
Sbjct: 289 -SQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLF 347
Query: 245 YILTEMA--ESTSMVFTRT-CDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSG 301
IL + ++V+ + + KA+ I+G +R + F G
Sbjct: 348 DILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGG 407
Query: 302 ECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEL 361
E +L+ T V RG+D+ V VI +D+P+ K+YIH +GR +R G G AI VN+ +
Sbjct: 408 EVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR 467
Query: 362 EWY 364
+
Sbjct: 468 NLF 470
>AT3G02065.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359136-360734
FORWARD LENGTH=505
Length = 505
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 115/363 (31%), Positives = 187/363 (51%), Gaps = 13/363 (3%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL- 70
+F GLP L+ E G+ P IQ +AIP AL GK ++ A TGSGKT +F +PI+
Sbjct: 111 TFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPAALTGKSLLASADTGSGKTASFLVPIIS 170
Query: 71 -----HALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQS 125
H+ + + + A V++PTREL +Q+ +Q + LG + K A++VGG M Q
Sbjct: 171 RCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVEDQAKMLGKGLPFKTALVVGGDPMSGQL 230
Query: 126 IKIAKQPHIIVGTPGRVLDHL-KNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAI 184
+I + +I+GTPGRV+D L K+T + VLDE D +L F + + +I QA+
Sbjct: 231 YRIQQGVELIIGTPGRVVDLLSKHT--IELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL 288
Query: 185 PRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLV 244
+ + LFSAT++++V+K+ + + + + + Q ++ AK K L
Sbjct: 289 -SQPQVLLFSATISREVEKVGGSLAKEIILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLF 347
Query: 245 YILTEMA--ESTSMVFTRT-CDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSG 301
IL + ++V+ + + KA+ I+G +R + F G
Sbjct: 348 DILRSQNHFKPPAVVYVSSRVGADLLANAITVVTGVKALSIHGEKPMKERRDVMGSFLGG 407
Query: 302 ECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYEL 361
E +L+ T V RG+D+ V VI +D+P+ K+YIH +GR +R G G AI VN+ +
Sbjct: 408 EVPVLVSTGVLGRGVDLLVVRQVIVFDMPSTIKEYIHVIGRASRMGEKGTAIVFVNEDDR 467
Query: 362 EWY 364
+
Sbjct: 468 NLF 470
>AT1G12770.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:4351888-4353543 FORWARD LENGTH=551
Length = 551
Score = 176 bits (445), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 208/421 (49%), Gaps = 60/421 (14%)
Query: 10 SKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPI 69
+KSF++LGLPDSL+++ E+ G++ P +Q+ A+P ++G D + + TGSGKT A+ LPI
Sbjct: 109 AKSFEELGLPDSLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPI 168
Query: 70 LHA---LLEAPRPNH--------FFACVMSPTRELAIQIAEQFEALGSEIGVKCA-VLVG 117
L L E R +H A +++P+REL +QI + E L + + LVG
Sbjct: 169 LSEIGPLAEKSRSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVG 228
Query: 118 GIDMVQQSIKIAK-QPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEES 176
G + ++Q + K +P I+VGTPGR+ + K K + ++LVLDE D LL+ +F E
Sbjct: 229 GANRMRQEEALKKNKPAIVVGTPGRIAEISKGGKLHTHG-CRFLVLDEVDELLSFNFRED 287
Query: 177 LNEILQAIPR--------------ERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYS 222
++ IL+ + + R+T L SAT+ V + + PV ++ A+K +
Sbjct: 288 IHRILEHVGKRSGAGPKGEVDERANRQTILVSATVPFSVIRAAKSWSHEPVLVQ-ANKVT 346
Query: 223 TVDT-------------------------------LKQQYRFLPAKHKDCYLVYILTEMA 251
+DT LK Y +HK L + +
Sbjct: 347 PLDTVQPSAPVMSLTPTTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALD 406
Query: 252 ESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDV 311
+ + F + + ++G + + R L KFK+GE +L+ ++
Sbjct: 407 AQSVIAFMNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNEL 466
Query: 312 ASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLI 371
++RGLD+ D+V+N ++PT++ Y HR GRT R GR G +++ + ++ ++EK +
Sbjct: 467 SARGLDVAECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQL 526
Query: 372 G 372
G
Sbjct: 527 G 527
>AT3G16840.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:5738020-5743042
REVERSE LENGTH=826
Length = 826
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 196/410 (47%), Gaps = 71/410 (17%)
Query: 22 LVEACEKLGWTTPLKIQAEAIPLA-LQGKDVIGLAQTGSGKTGAFALPILHALL------ 74
L+++ +L + P KIQ +A QGKDVIG A+TGSGKT AF LPIL LL
Sbjct: 201 LMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLPILQRLLDEREKV 260
Query: 75 ---------EAPR---PNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMV 122
EA + + A +++PTRELA+Q+ E E + VK +VGG+
Sbjct: 261 GKLYALKGEEAQKYAADGYLRALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSE 320
Query: 123 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGF--SFSRLKYLVLDEADRLLNEDFEESLNEI 180
+Q ++ ++P I+V TPGR+ + + + L + VLDEADR++ L I
Sbjct: 321 KQERRLKEKPEIVVATPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVERGHFRELQSI 380
Query: 181 LQAIP------------------------RERRTFLFSATMT------KKVQK------- 203
L +P ++R+TF+FSAT+ KK+++
Sbjct: 381 LDLLPVTDKPNEGKTQTVKSNDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQ 440
Query: 204 ------------LQRVCLRNPVKIEAASKYSTVD-TLKQQYRFLPAKHKDCYLVYILTEM 250
+R +R+ V I + S + +++ + K KD YL YIL+
Sbjct: 441 SSSGEVNSIEVLSERAGMRDNVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVH 500
Query: 251 AESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTD 310
+ ++VF + R + M Q RL ++++F++ E IL+ TD
Sbjct: 501 GQGRTIVFCTSVTDLRHISGLLKILGLDVCTLFSEMKQRARLKSIDRFRASENGILIATD 560
Query: 311 VASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYE 360
+ +RG+DI V +I+Y +P +++ Y+HR GRTARA G +I+L+ E
Sbjct: 561 LVARGIDIKNVRTIIHYKLPHSAEVYVHRCGRTARAFADGCSIALIEPNE 610
>AT5G11170.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3554272-3556646 FORWARD LENGTH=344
Length = 344
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 110/341 (32%), Positives = 178/341 (52%), Gaps = 21/341 (6%)
Query: 50 DVIGLAQTGSGKTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEI- 108
DVI A++G GKT F L L + P P A V+ TRELA QI +F + +
Sbjct: 2 DVICQAKSGMGKTAVFVLSTLQQI--EPSPGQVSALVLCHTRELAYQICNEFVRFSTYLP 59
Query: 109 GVKCAVLVGGIDM-VQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADR 167
K +V GG+++ + + + + PHI+VGTPGRVL L K S +++ +LDE D+
Sbjct: 60 DTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVL-ALAREKDLSLKNVRHFILDECDK 118
Query: 168 LLNE-DFEESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYS-TVD 225
+L D + EI + P +++ +FSAT++K+++ + + +++P++I + T+
Sbjct: 119 MLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLH 178
Query: 226 TLKQQYRFLPAKHKDCYLVYILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGH 285
L Q Y L K+ L +L + + ++F ++ +I I+
Sbjct: 179 GLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSG 238
Query: 286 MSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTAR 345
MSQ +RL FK G IL+ TD+ RG+DI V++VINYD+P ++ Y+HRVGR R
Sbjct: 239 MSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGR 298
Query: 346 AGRSGVAISLV---------NQYELEWYIQIEKLIGKKLPE 377
G G+AI+ V NQ + + + I K+LPE
Sbjct: 299 FGTKGLAITFVASASDSEVLNQVQERFEVDI-----KELPE 334
>AT4G15850.1 | Symbols: ATRH1, RH1 | RNA helicase 1 |
chr4:9001426-9004534 FORWARD LENGTH=522
Length = 522
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 126/427 (29%), Positives = 204/427 (47%), Gaps = 71/427 (16%)
Query: 22 LVEACEKLGWTTPLKIQA----EAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEAP 77
L +A E +G ++ +Q E I +D+ + TGSGKT ++ALPI+ L A
Sbjct: 42 LKKALENMGISSLFPVQVAVWHETIGPGGFERDICVNSPTGSGKTLSYALPIVQLL--AS 99
Query: 78 RPNHFF-ACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQPH--- 133
RP A V+ PTR+LA+Q+ + F+A+ +G+ VG + + ++ K P
Sbjct: 100 RPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDA 159
Query: 134 ------------------IIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEE 175
I+V TPGR++DH+ NTKGF+ L+YLV+DE DRLL E ++
Sbjct: 160 GICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQS 219
Query: 176 SLNEILQ----------------------AIPRERR----------------TFLFSATM 197
L +LQ ++ RR + SAT+
Sbjct: 220 WLPTVLQLTQTSDDSLFPSFTPFVPSAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATL 279
Query: 198 TKKVQKLQRVCLRNPVKI-EAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAESTSM 256
T+ KL ++ L +P+ + S+Y + L+ K YLV +L +
Sbjct: 280 TQDPSKLIQLDLHHPLFMTTGGSRYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCI 339
Query: 257 VFTRTCDSTRXXXXXXX---XXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDVAS 313
+FT + ++TR KA +G ++QS R L F+ G+ +L+ +D +
Sbjct: 340 IFTSSVETTRRLCKLLNFFGDPKIKAKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALT 399
Query: 314 RGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQ-IEKLIG 372
RG+D+ V VINYD+P +K +IHR GRTARAG++G +L++ +E+ + + +EK+
Sbjct: 400 RGMDVKGVTNVINYDMPPFAKTFIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGS 459
Query: 373 KKLPEYP 379
P YP
Sbjct: 460 DSCPIYP 466
>AT1G71280.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:26870262-26872152 REVERSE LENGTH=465
Length = 465
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 157/312 (50%), Gaps = 32/312 (10%)
Query: 18 LPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEA- 76
L + ++EA ++ G+ +QAE IP KDV+ A TGSGKT AF LP + + +
Sbjct: 24 LSEDIIEALDRSGFEVCTPVQAETIPFLCSHKDVVVDAATGSGKTLAFLLPFIEIIRRSN 83
Query: 77 ---PRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQPH 133
P+P+ ++SPTREL+ QI + A+ + KC + ++ +++ + +
Sbjct: 84 SYPPKPHQVMGVIISPTRELSAQIHKVARAVRLDFA-KCREVEADMNTLEE-----EGAN 137
Query: 134 IIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTFLF 193
+++GTPGR+ D +K + F L+ L+LDEADRLL+ F++ +N I+ +P++RRT LF
Sbjct: 138 LLIGTPGRLSDMMKRMEFLDFRNLEILILDEADRLLDMGFQKQVNYIISRLPKQRRTGLF 197
Query: 194 SATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAES 253
SAT T+ V L + LRNP Y A K LV++L E
Sbjct: 198 SATQTQAVADLAKAGLRNP------------------YLKCEADQKSSQLVHLLIENKNK 239
Query: 254 TSMVFTRTCDSTR----XXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCT 309
+VF TC P +G M Q R AL F +LLCT
Sbjct: 240 KLVVFFMTCACVDYWGLVISKIPSLKSISFFPTHGKMDQKGRDTALASFTEASSGVLLCT 299
Query: 310 DVASRGLDIPTV 321
DVA+RGLDIP +
Sbjct: 300 DVAARGLDIPGI 311
>AT4G09730.1 | Symbols: RH39 | RH39 | chr4:6136333-6139510 FORWARD
LENGTH=621
Length = 621
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 198/396 (50%), Gaps = 27/396 (6%)
Query: 1 MEEENEI-----EVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLA 55
+EEE+ I ++ ++F++LGL + ++ A ++L P +IQ IP ++ K V+ +
Sbjct: 97 VEEESSIRKKSKKLVENFQELGLSEEVMGALQELNIEVPTEIQCIGIPAVMERKSVVLGS 156
Query: 56 QTGSGKTGAFALPILHALLE-------APRPNHFFACVMSPTRELAIQIAEQFEALGSEI 108
TGSGKT A+ LPI+ + E +P V+ PTREL+ Q+ +++
Sbjct: 157 HTGSGKTLAYLLPIVQLMREDEANLGKKTKPRRPRTVVLCPTRELSEQVYRVAKSISHHA 216
Query: 109 GVKCAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRL 168
+ ++ GG + Q + ++VGTPGR+L H++ + + YLVLDEAD +
Sbjct: 217 RFRSILVSGGSRIRPQEDSLNNAIDMVVGTPGRILQHIEEG-NMVYGDIAYLVLDEADTM 275
Query: 169 LNEDFEESLNEILQAIPRER--------RTFLFSATMTKKVQKLQRVCLRNPVKIEAASK 220
+ F + + L + + +T L +ATMT VQKL + + ++
Sbjct: 276 FDRGFGPEIRKFLAPLNQRALKTNDQGFQTVLVTATMTMAVQKLVDEEFQGIEHLRTSTL 335
Query: 221 YSTVDTLKQQYRFLPAKHK--DCYLVYILTEMAE-STSMVFTRTCDSTRXXXXXXXXXXX 277
+ + + + L + L + +A+ S MVF T +S+R
Sbjct: 336 HKKIANARHDFIKLSGGEDKLEALLQVLEPSLAKGSKVMVFCNTLNSSRAVDHYLSENQI 395
Query: 278 KAIPINGHMSQSKRLGALNKFKS--GECNILLCTDVASRGLDIPTVDMVINYDIPTNSKD 335
+ +G + +R+ L KFK G+C L+CTD+A+RGLD+ VD V+ +D P NS D
Sbjct: 396 STVNYHGEVPAEQRVENLKKFKDEEGDCPTLVCTDLAARGLDL-DVDHVVMFDFPKNSID 454
Query: 336 YIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLI 371
Y+HR GRTAR G G SLV++ + +IE+ +
Sbjct: 455 YLHRTGRTARMGAKGKVTSLVSRKDQMLAARIEEAM 490
>AT3G09720.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:2980483-2983268
REVERSE LENGTH=541
Length = 541
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 199/372 (53%), Gaps = 28/372 (7%)
Query: 11 KSFKDL----GLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFA 66
KSF +L G ++ +LG+ P IQ +AIP+ L G++ A TGSGKT AF
Sbjct: 137 KSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSGRECFACAPTGSGKTFAFI 196
Query: 67 LPILHALLEAPRPNHFFACVMSPTRELAIQIAEQFEAL--GSEIGVKCAVLVGGIDMVQQ 124
P+L L+ P + A ++SP RELA Q A + + L GS ++ M +
Sbjct: 197 CPML-IKLKRPSTDGIRAVILSPARELAAQTAREGKKLIKGSNFHIRL--------MTKP 247
Query: 125 SIKIAKQPH----IIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFEESLNEI 180
+K A +++ TP R+ +K K S+++YLVLDE+D+L + + ++ +
Sbjct: 248 LVKTADFSKLWCDVLISTPMRLKRAIK-AKKIDLSKVEYLVLDESDKLFEQSLLKQIDCV 306
Query: 181 LQAI--PRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKH 238
++A P R+ LFSAT+ V++L R + + V++ K + +T+KQ+ F A
Sbjct: 307 VKACSNPSIIRS-LFSATLPDSVEELARSIMHDAVRVIIGRKNTASETVKQKLVF--AGS 363
Query: 239 KDCYLVYILTEMAESTS---MVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGAL 295
++ L+ + AES + ++F ++ + + +A I+ + +R A+
Sbjct: 364 EEGKLLALRQSFAESLNPPVLIFVQSKERAKELYDELKCENIRAGVIHSDLPPGERENAV 423
Query: 296 NKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISL 355
++F++GE +L+ TDV +RG+D ++ VINYD P ++ YIHR+GR+ RAGRSG AI+
Sbjct: 424 DQFRAGEKWVLIATDVIARGMDFKGINCVINYDFPDSASAYIHRIGRSGRAGRSGEAITF 483
Query: 356 VNQYELEWYIQI 367
+ ++ + I
Sbjct: 484 YTEQDVPFLRNI 495
>AT2G07750.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr2:3576483-3580396 FORWARD LENGTH=845
Length = 845
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 199/398 (50%), Gaps = 22/398 (5%)
Query: 1 MEEENE----IEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQ 56
MEE+ E I +K F + + ++A G ++Q + L GKD + A+
Sbjct: 361 MEEKQEPHDSIYSAKRFDESCISPLTLKALSASGIVKMTRVQDATLSECLDGKDALVKAK 420
Query: 57 TGSGKTGAFALPILHALLEAPRPNH-------FFACVMSPTRELAIQIAEQFEAL-GSEI 108
TG+GK+ AF LP + +L+A F ++ PTRELA QIA + +AL +
Sbjct: 421 TGTGKSMAFLLPAIETVLKAMNSGKGVHKVAPIFVLILCPTRELASQIAAEGKALLKNHD 480
Query: 109 GVKCAVLVGGIDMVQQSIKIAKQP-HIIVGTPGRVLDHLKNTKGFS--FSRLKYLVLDEA 165
G+ L+GG ++ +P I++ TPGR+LDH++N G + LK ++DEA
Sbjct: 481 GIGVQTLIGGTRFRLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEA 540
Query: 166 DRLLNEDFEESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNP---VKIEAASKYS 222
D LL+ F+ + +I+ +PR+R++ LFSAT+ K+V+++ ++ L+ +
Sbjct: 541 DLLLDLGFKRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVE 600
Query: 223 TVDTLKQQYRFLPAKHKDCYLVYILTE----MAESTSMVFTRTCDSTRXXXXXXXXXXXK 278
T D +KQ P + + ++L E M + +VF T T
Sbjct: 601 THDKVKQSCIVAPHESHFHLVPHLLKEHINNMPDYKIIVFCSTGMVTSLMYTLLREMKLN 660
Query: 279 AIPINGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIH 338
I+ Q R ++FK IL+ +DV++RG++ P V +VI IP++ + YIH
Sbjct: 661 VREIHARKPQLHRTCVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIH 720
Query: 339 RVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLP 376
R+GRT R G+ G + L+ +E + +++ L + +P
Sbjct: 721 RLGRTGREGKGGKGLLLIAPWERYFLDELKDLPLEPIP 758
>AT5G62190.1 | Symbols: PRH75 | DEAD box RNA helicase (PRH75) |
chr5:24980542-24983879 REVERSE LENGTH=671
Length = 671
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 194/408 (47%), Gaps = 41/408 (10%)
Query: 3 EENEIEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKT 62
E+ E++ + + L E + G IQA + L G D++G A+TG GKT
Sbjct: 88 EDVEVDNPNAVSKFRISAPLREKLKANGIEALFPIQASTFDMVLDGADLVGRARTGQGKT 147
Query: 63 GAFALPILHALLEAPRPNHF--------FACVMSPTRELAIQIAEQFEALGSEIGVKCAV 114
AF LPIL +L+ P + V+ PTRELA Q+A F+A G +G+
Sbjct: 148 LAFVLPILESLVNGPAKSKRKMGYGRSPSVLVLLPTRELAKQVAADFDAYGGSLGLSSCC 207
Query: 115 LVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFE 174
L GG Q K+ + I+VGTPGR+ DH++ + FS L++ VLDEAD +L F
Sbjct: 208 LYGGDSYPVQEGKLKRGVDIVVGTPGRIKDHIER-QNLDFSYLQFRVLDEADEMLRMGFV 266
Query: 175 ESLNEILQAIPRERR--TFLFSATMT-----------KKVQKLQRVCLRNPVKIEAASKY 221
E + IL + + T LFSAT+ K+ QK + + +K + ++
Sbjct: 267 EDVELILGKVEDSTKVQTLLFSATLPSWVKNISNRFLKRDQKTIDLVGNDKMKASNSVRH 326
Query: 222 STVDTLKQQYRFLPAKHKDCYLVYILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIP 281
+ K L CY + +++F T+ +
Sbjct: 327 IAIPCNKAAMARLIPDIISCY-------SSGGQTIIFAE----TKVQVSELSGLLDGSRA 375
Query: 282 INGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVG 341
++G + QS+R L F++G+ L+ T+VA+RGLDI V ++I + P + YIHR G
Sbjct: 376 LHGEIPQSQREVTLAGFRNGKFATLVATNVAARGLDINDVQLIIQCEPPREVEAYIHRSG 435
Query: 342 RTARAGRSGVAISL-------VNQYELEWYIQIEKLIGKKLPEYPARA 382
RT RAG +GVA++L V++ E E I+ E L + P+ AR+
Sbjct: 436 RTGRAGNTGVAVTLYDSRKSSVSRIEKEAGIKFEHLAAPQ-PDEIARS 482
>AT1G63250.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:23463284-23466451 REVERSE LENGTH=798
Length = 798
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 198/398 (49%), Gaps = 22/398 (5%)
Query: 1 MEEENE----IEVSKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQ 56
MEE+ E I +K F + + ++A G ++Q + L GKD + A+
Sbjct: 314 MEEKQEPHDSIYSAKRFDESCISPLTLKALSASGILKMTRVQDATLSECLDGKDALVKAK 373
Query: 57 TGSGKTGAFALPILHALLEAPRPNH-------FFACVMSPTRELAIQIAEQFEAL-GSEI 108
TG+GK+ AF LP + +L+A FA ++ PTRELA QIA + +AL
Sbjct: 374 TGTGKSMAFLLPAIETVLKAMNSGKGVNKVAPIFALILCPTRELASQIAAEGKALLKFHD 433
Query: 109 GVKCAVLVGGIDMVQQSIKIAKQP-HIIVGTPGRVLDHLKNTKGFS--FSRLKYLVLDEA 165
G+ L+GG ++ +P I++ TPGR+LDH++N G + LK ++DEA
Sbjct: 434 GIGVQTLIGGTRFKLDQQRLESEPCQILIATPGRLLDHIENKSGLTSRLMALKLFIVDEA 493
Query: 166 DRLLNEDFEESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNP---VKIEAASKYS 222
D LL+ F + +I+ +PR+R++ LFSAT+ K+V+++ ++ L+ +
Sbjct: 494 DLLLDLGFRRDVEKIIDCLPRQRQSLLFSATIPKEVRRVSQLVLKRDHSYIDTIGLGCVE 553
Query: 223 TVDTLKQQYRFLPAKHKDCYLVYILTEMAESTS----MVFTRTCDSTRXXXXXXXXXXXK 278
T D ++Q P + + ++L E +T +VF T T
Sbjct: 554 THDKVRQSCIVAPHESHFHLVPHLLKEHINNTPDYKIIVFCSTGMVTSLMYTLLREMKLN 613
Query: 279 AIPINGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIH 338
I+ Q R ++FK IL+ +DV++RG++ P V +VI IP++ + YIH
Sbjct: 614 VREIHARKPQLHRTRVSDEFKESNRLILVTSDVSARGMNYPDVTLVIQVGIPSDREQYIH 673
Query: 339 RVGRTARAGRSGVAISLVNQYELEWYIQIEKLIGKKLP 376
R+GRT R G+ G + L+ +E + +++ L + +P
Sbjct: 674 RLGRTGREGKGGEGLLLIAPWERYFLDELKDLPLEPIP 711
>AT3G02065.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr3:359628-360734
FORWARD LENGTH=368
Length = 368
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 13/335 (3%)
Query: 40 EAIPLALQGKDVIGLAQTGSGKTGAFALPIL------HALLEAPRPNHFFACVMSPTREL 93
+AIP AL GK ++ A TGSGKT +F +PI+ H+ + + + A V++PTREL
Sbjct: 2 QAIPAALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTREL 61
Query: 94 AIQIAEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHL-KNTKGF 152
+Q+ +Q + LG + K A++VGG M Q +I + +I+GTPGRV+D L K+T
Sbjct: 62 CVQVEDQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHT--I 119
Query: 153 SFSRLKYLVLDEADRLLNEDFEESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNP 212
+ VLDE D +L F + + +I QA+ + + LFSAT++++V+K+ +
Sbjct: 120 ELDNIMTFVLDEVDCMLQRGFRDQVMQIFQAL-SQPQVLLFSATISREVEKVGGSLAKEI 178
Query: 213 VKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMA--ESTSMVFTRT-CDSTRXXX 269
+ + + + Q ++ AK K L IL + ++V+ + +
Sbjct: 179 ILVSIGNPNKPNKAVNQLAIWVDAKQKKQKLFDILRSQNHFKPPAVVYVSSRVGADLLAN 238
Query: 270 XXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDI 329
KA+ I+G +R + F GE +L+ T V RG+D+ V VI +D+
Sbjct: 239 AITVVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVSTGVLGRGVDLLVVRQVIVFDM 298
Query: 330 PTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWY 364
P+ K+YIH +GR +R G G AI VN+ + +
Sbjct: 299 PSTIKEYIHVIGRASRMGEKGTAIVFVNEDDRNLF 333
>AT4G34910.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr4:16631661-16634834
FORWARD LENGTH=626
Length = 626
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 126/420 (30%), Positives = 193/420 (45%), Gaps = 67/420 (15%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
KSF++LGL L+ A K G P IQ AIP L+GKDV+ A+TGSGKT A+ LP+L
Sbjct: 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105
Query: 71 HALLEAPR-------PNHFFACVMSPTRELAIQIAEQFEALGS--EIGVKCAVLVGGIDM 121
L A P+ F ++ P+REL Q+ + +L + +K L +
Sbjct: 106 QKLFSADSVSKKKLAPSAF---ILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSA 162
Query: 122 VQQSIKIAKQPHIIVGTP--------GRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDF 173
+A P I+V TP VL+ ++ S LVLDEAD LL+ +
Sbjct: 163 SDMRNALAGLPEILVSTPACIPKCFAAGVLEPTAVSESLSI-----LVLDEADLLLSYGY 217
Query: 174 EESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKI---EAASKYSTVDTLKQQ 230
E++L + IPR + L SAT + V+KL+++ L NP+ + E K V + QQ
Sbjct: 218 EDNLRSVTSIIPRRCQCLLMSATTSSDVEKLKKLILHNPIVLTLTEDNDKEEAVPSNVQQ 277
Query: 231 YRFLPAKHKD---CYLVYILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMS 287
+ ++ +D L + E+ + ++F T D K+ +NG +
Sbjct: 278 F-WISCSAQDKLLHILALLKLEVVQKKILIFINTIDMGFRLKLFLEKFGIKSAILNGELP 336
Query: 288 QSKRLGALNKFKSGECNILLCTDVAS---------------------------------- 313
Q+ RL L +F +G + L+ TD S
Sbjct: 337 QNSRLHILEQFNAGLFDYLIATDDNSQTKKQKEEAKGEANKENKKNNKRSKPKLDAEFGV 396
Query: 314 -RGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIEKLIG 372
RG+D V VIN+D+P + YIHR+GRT RA SG ++SL++ E+E + I+ +
Sbjct: 397 VRGIDFKKVHTVINFDMPQSVTGYIHRIGRTGRAYSSGSSVSLISPDEMEGFEDIKSFLA 456
>AT3G53110.1 | Symbols: LOS4 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr3:19687968-19690423 FORWARD LENGTH=496
Length = 496
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 184/382 (48%), Gaps = 33/382 (8%)
Query: 13 FKDLGLPDSLVEACE-KLGWTTPLKIQAEAIPLALQ--GKDVIGLAQTGSGKTGAFALPI 69
F+DL L L++ ++ + P KIQA ++P+ + K +I A GSGKT F L +
Sbjct: 93 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGM 152
Query: 70 LHAL---LEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIGVKCAVLVG----GIDMV 122
L + L P+ A + PTRELA Q E + +G G+ + V G
Sbjct: 153 LSRVDPTLREPQ-----ALCICPTRELANQNMEVLQKMGKFTGITAELAVPDSTRGAPAA 207
Query: 123 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNED-FEESLNEIL 181
+ ++ H+++GTPG L K + LK LV DEAD +L D F + +I+
Sbjct: 208 TRGAPVS--AHVVIGTPG-TLKKWMAFKRLGLNHLKILVFDEADHMLATDGFRDDSLKIM 264
Query: 182 QAIPRERRTF---LFSATMTKKVQKLQRVCLRNPVKIEAASKYSTVDTLKQQYRFLPAKH 238
+ I R F LFSAT + V+ +++P ++ + +D++KQ P +
Sbjct: 265 KDIGRVNPNFQVLLFSATFNETVKDFVARTVKDPNQLFVKREDLALDSVKQYKVVCPKEQ 324
Query: 239 KDCYLVYI-LTEMAE-STSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALN 296
++ + E+ + +++F +T S + ++G++++S R +
Sbjct: 325 NKIEVIKDQIMELGDIGQTIIFVKTKASAQKVHKALAEMGYDVTSVHGNLTESDRDKIVK 384
Query: 297 KFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKD-------YIHRVGRTARAGRS 349
+FK +L+ TDV +RG D V++V+NY++PT + Y+HRVGR R GR
Sbjct: 385 EFKECLTQVLIATDVIARGFDQQRVNLVVNYNLPTKYETGEPDYEVYLHRVGRAGRFGRK 444
Query: 350 GVAISLV--NQYELEWYIQIEK 369
G +L+ + ++ E +IEK
Sbjct: 445 GAVFNLLLDDGWDKEVMEKIEK 466
>AT3G06980.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr3:2201531-2204662 FORWARD LENGTH=781
Length = 781
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 167/368 (45%), Gaps = 31/368 (8%)
Query: 11 KSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPIL 70
K+F ++G + +++A ++ + P IQA A + GK I Q+GSGKT A+ +P++
Sbjct: 374 KTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVI 433
Query: 71 HALLEAPRPNHFFAC-------VMSPTRELAIQIAEQFEALG-SEIGVKCAVLVGGIDMV 122
L E H + V+ PT ELA Q+ ++ S + + V+ GG
Sbjct: 434 QRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQR 493
Query: 123 QQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNED-FEESLNEIL 181
Q + + +++ TPGR +L N S L+ +LDE D L +D FE +L ++
Sbjct: 494 TQLENLEQGVDVLIATPGR-FTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLI 552
Query: 182 QAIPRERRTFLFSATMTKKV-QKLQRV-----------CLRNPVKIEAASKYSTVDTLKQ 229
+ P + +AT+ ++ KL V R +E + D +
Sbjct: 553 NSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAE 612
Query: 230 QYRFLPAKHKDCYLVYILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXK-----AIPING 284
+ ++K L+ I+ E S +++F ++ R K +P +
Sbjct: 613 KTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHA 672
Query: 285 HMSQSKRLGALNKFKSGECN----ILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRV 340
+SQ RL + +F S + L+CTD ASRG+D VD V+ +D P + +Y+ RV
Sbjct: 673 ALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRV 732
Query: 341 GRTARAGR 348
GRTAR R
Sbjct: 733 GRTARGAR 740
>AT5G11200.2 | Symbols: | DEAD/DEAH box RNA helicase family protein
| chr5:3567389-3570686 FORWARD LENGTH=486
Length = 486
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 10 SKSFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPI 69
S F+D L L+ A G+ P ++Q E IP A+ G DVI A++G GKT F L
Sbjct: 45 SSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLST 104
Query: 70 LHALLEAPRPNHFFACVMSPTRELAIQIAEQFEALGSEI-GVKCAVLVGGIDM-VQQSIK 127
L + P P A V+ TRELA QI +F + + K +V GG+++ + + +
Sbjct: 105 LQQI--EPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLL 162
Query: 128 IAKQPHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNE-DFEESLNEILQAIPR 186
+ PHI+VGTPGRVL L K S +++ +LDE D++L D + EI + P
Sbjct: 163 KNECPHIVVGTPGRVL-ALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPH 221
Query: 187 ERRTFLFSATMTKKVQKLQRVCLRNPVKIEAAS 219
+++ +FSAT++K+++ + + +++ ++ E S
Sbjct: 222 DKQVMMFSATLSKEIRPVCKKFMQDFLENETVS 254
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 14/164 (8%)
Query: 223 TVDTLKQQYRFLPAKHKDCYLVYILTEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPI 282
T+ L Q Y L K+ L +L + + ++F ++ +I I
Sbjct: 318 TLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICI 377
Query: 283 NGHMSQSKRLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGR 342
+ MSQ +RL FK G IL+ TD+ RG+DI V++VINYD+P ++ Y+HRVGR
Sbjct: 378 HSGMSQEERLTRYKSFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGR 437
Query: 343 TARAGRSGVAISLV---------NQYELEWYIQIEKLIGKKLPE 377
R G G+AI+ V NQ + + + I K+LPE
Sbjct: 438 AGRFGTKGLAITFVASASDSEVLNQVQERFEVDI-----KELPE 476
>AT5G19210.2 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6461444-6463687
FORWARD LENGTH=472
Length = 472
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 171/373 (45%), Gaps = 33/373 (8%)
Query: 18 LPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEAP 77
+P+ ++ E++G+ P IQ EA+P G+D I AQTGSGKT + L I L P
Sbjct: 83 VPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTLTYLLLIFS--LINP 140
Query: 78 RPNHFFACVMSPTRELAIQIAE--QFEALGSEIGVK----CAVLVGGIDMVQQSIKIAKQ 131
+ + A ++ PTREL +Q+ + + A SEI VK A+L GG +S A+
Sbjct: 141 QRSSVQAVIVVPTRELGMQVTKVARMLAAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEP 200
Query: 132 PHIIVGTPGRVLDHLKNTKGFSFSRLKYLVLDEADRLLNEDFE-ESLNEILQAIPR-ERR 189
P I+V T L H+ F ++ LV+DE D L + S+ ++L + ++R
Sbjct: 201 PAILVATVAS-LCHMLEKHIFRIDSVRVLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKR 259
Query: 190 TFLFSATMTKKVQKLQRVCL------RNPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYL 243
+F++ + + C+ R+ V + ++ L ++ +K L
Sbjct: 260 QTVFASASIPQHKHFVHDCIQQKWTKRDVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVL 319
Query: 244 VYILTEMAESTSMVFT---------RTCDSTRXXXXXXXXXXXKA----IPINGHMSQSK 290
+ +L A ++++F D + K + + G M+ +
Sbjct: 320 LALLESDAPESAIIFVGEQSEKSKKAGNDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNS 379
Query: 291 RLGALNKFKSGECNILLCTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTAR---AG 347
R +L + + G +L+ TD+A+RG+D+P + N+D+P DY+HR GR R +
Sbjct: 380 RAASLTEIRQGGGFLLVSTDIAARGIDLPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSD 439
Query: 348 RSGVAISLVNQYE 360
R + +L+ E
Sbjct: 440 RKCIVANLITSEE 452
>AT1G59990.1 | Symbols: | DEA(D/H)-box RNA helicase family protein
| chr1:22090369-22092885 REVERSE LENGTH=581
Length = 581
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 34/225 (15%)
Query: 12 SFKDLGLPDSLVEACEKLGWTTPLKIQAEAIPLALQGKDVIGLAQTGSGKTGAFALPILH 71
S+K LGL D++ A G+ P QA IP L GKDVI A+TGSGKT + PI+
Sbjct: 81 SWKSLGLSDNVSIALRDSGFDRPSLTQAVCIPSILSGKDVIVAAETGSGKTHGYLAPIID 140
Query: 72 ALL------------EAPRPNHFFACVMSPTRELAIQIAEQFEALGSEIG---VKCAVLV 116
L E P P + ++ P L Q+ L E G ++ +
Sbjct: 141 QLTNTALDSEVTNREERPFPLKNISLILCPNVMLCEQVVRMVNGLVDEDGNPLLRVEAVC 200
Query: 117 GGIDMVQQSIKIAKQPHIIVGTPGRVLDHL--KNTKGFSFSR-LKYLVLDEADRLLNEDF 173
G + P IIV TP +L+++ K + F R +KY+V DEAD LL F
Sbjct: 201 GSQGWPD------RLPDIIVSTPAALLNNIEPKRNRRLEFLRCVKYVVFDEADMLLCGSF 254
Query: 174 EESLNEILQAIPRERRTFLFSATMTKKVQKLQRVCLRNPVKIEAA 218
+ N+I++ I R K+V +L + L P++I+A+
Sbjct: 255 Q---NQIIRLINMLRFD-------EKQVSRLAKSNLGRPMEIDAS 289
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
Query: 255 SMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLCTDVASR 314
+MVF T ++ + + + +R L F+ + +CTD A+R
Sbjct: 427 TMVFANTVEAVEAVADILEKASIQCYRYHKNHKLDERANILADFRE-TGGVFVCTDAAAR 485
Query: 315 GLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQ 358
G+D+P V VI D +++ D++HR+GRTARAG+ G SL +
Sbjct: 486 GVDVPNVSHVIQADFASSAVDFLHRIGRTARAGQYGTVTSLYTE 529
>AT5G19210.1 | Symbols: | P-loop containing nucleoside triphosphate
hydrolases superfamily protein | chr5:6462100-6463687
FORWARD LENGTH=315
Length = 315
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 122/286 (42%), Gaps = 29/286 (10%)
Query: 103 ALGSEIGVK----CAVLVGGIDMVQQSIKIAKQPHIIVGTPGRVLDHLKNTKGFSFSRLK 158
A SEI VK A+L GG +S A+ P I+V T L H+ F ++
Sbjct: 11 AAKSEIDVKGCTVMALLDGGTLRRHKSWLKAEPPAILVATVAS-LCHMLEKHIFRIDSVR 69
Query: 159 YLVLDEADRLLNEDFE-ESLNEILQAIPR-ERRTFLFSATMTKKVQKLQRVCL------R 210
LV+DE D L + S+ ++L + ++R +F++ + + C+ R
Sbjct: 70 VLVVDEVDFLFYSSKQVGSVRKLLTSFSSCDKRQTVFASASIPQHKHFVHDCIQQKWTKR 129
Query: 211 NPVKIEAASKYSTVDTLKQQYRFLPAKHKDCYLVYILTEMAESTSMVFT---------RT 261
+ V + ++ L ++ +K L+ +L A ++++F
Sbjct: 130 DVVHVHVSAIMPMPLCLLHRFVMCEKTNKHQVLLALLESDAPESAIIFVGEQSEKSKKAG 189
Query: 262 CDSTRXXXXXXXXXXXKA----IPINGHMSQSKRLGALNKFKSGECNILLCTDVASRGLD 317
D + K + + G M+ + R +L + + G +L+ TD+A+RG+D
Sbjct: 190 NDPSTTLLMEFLKTSYKGSLEILLLEGDMNFNSRAASLTEIRQGGGFLLVSTDIAARGID 249
Query: 318 IPTVDMVINYDIPTNSKDYIHRVGRTAR---AGRSGVAISLVNQYE 360
+P + N+D+P DY+HR GR R + R + +L+ E
Sbjct: 250 LPETTHIFNFDLPQTVTDYLHRAGRAGRKPFSDRKCIVANLITSEE 295
>AT1G10930.1 | Symbols: ATSGS1, RECQ4A, ATRECQ4A | DNA helicase
(RECQl4A) | chr1:3648032-3654997 REVERSE LENGTH=1188
Length = 1188
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 146/366 (39%), Gaps = 62/366 (16%)
Query: 38 QAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQI 97
Q E I + G DV L TG GK+ + LP L V+SP L I
Sbjct: 458 QREIINATMSGSDVFVLMPTGGGKSLTYQLPALIC--------GGITLVISP---LVSLI 506
Query: 98 AEQFEALGSEIGVKCAVLVGGIDMVQQSIKIAKQPH-------IIVGTPGRV------LD 144
+Q L + + A L G++ +Q +KI ++ + ++ TP +V L
Sbjct: 507 QDQIMNL-LQANIPAASLSAGMEWAEQ-LKIFQELNSEHSKYKLLYVTPEKVAKSDSLLR 564
Query: 145 HLKNTKGFSFSRLKYLVLDEADRL--LNEDFE---ESLNEILQAIPRERRTFLFSATMTK 199
HL+N S L V+DEA + DF +SL + Q P +AT T
Sbjct: 565 HLENLN--SRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFP-NIPVLALTATATA 621
Query: 200 KVQK--LQRVCLRNPVKIEAASK-----YSTVDTLKQQY----RFLPAKHKD-CYLVYIL 247
V++ +Q + L N V + YS V K+ +F+ H D C ++Y L
Sbjct: 622 SVKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFDECGIIYCL 681
Query: 248 TEMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILL 307
+ M C+ KA +G M +R ++ E NI+
Sbjct: 682 SRM----------DCEKV---SERLQEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIIC 728
Query: 308 CTDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQI 367
T G++ P V VI++ +P + + Y G RAGR G S V Y YI++
Sbjct: 729 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG---RAGRDGQRSSCVLYYGYGDYIRV 785
Query: 368 EKLIGK 373
+ +I +
Sbjct: 786 KHMISQ 791
>AT1G60930.1 | Symbols: RECQL4B, ATRECQ4B, RECQ4B | RECQ helicase
L4B | chr1:22431093-22438302 REVERSE LENGTH=1150
Length = 1150
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 144/365 (39%), Gaps = 60/365 (16%)
Query: 38 QAEAIPLALQGKDVIGLAQTGSGKTGAFALPILHALLEAPRPNHFFACVMSPTRELAIQI 97
Q E I + G DV L TG GK+ + LP ALL A V+SP L I
Sbjct: 474 QREIINATMSGCDVFVLMPTGGGKSLTYQLP---ALLCAG-----ITLVISPLVSL---I 522
Query: 98 AEQFEALGSEIGVKCAVLVGGIDMVQQ-------SIKIAKQPHIIVGTPGRV------LD 144
+Q L + + A L G++ +Q S + +K + V TP +V L
Sbjct: 523 QDQIMNL-LQTNISAASLSAGMEWAEQLEILQELSSEKSKYKLLYV-TPEKVAKSESLLR 580
Query: 145 HLKNTKGFSFSRLKYLVLDEADRL--LNEDFE---ESLNEILQAIPR-ERRTFLFSATMT 198
HL+ S S L V+DEA + DF + L + Q P +AT +
Sbjct: 581 HLEILN--SRSLLARFVIDEAHCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATATTS 638
Query: 199 KKVQKLQRVCLRNPVKIEAASK-----YSTV----DTLKQQYRFLPAKHKD-CYLVYILT 248
K +Q + L N V + YS V L+ +F+ H D C ++Y L+
Sbjct: 639 VKEDVVQALGLVNCVVFRQSFNRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGIIYCLS 698
Query: 249 EMAESTSMVFTRTCDSTRXXXXXXXXXXXKAIPINGHMSQSKRLGALNKFKSGECNILLC 308
M C+ KA +G M KR ++ E NI+
Sbjct: 699 RM----------DCEKV---TEALRVFGHKAAFYHGSMDPGKRAFVQKQWSKDEINIICA 745
Query: 309 TDVASRGLDIPTVDMVINYDIPTNSKDYIHRVGRTARAGRSGVAISLVNQYELEWYIQIE 368
T G++ P V VI++ +P + + Y G RAGR G S V Y YI+++
Sbjct: 746 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG---RAGRDGQRSSCVLYYSYTDYIRVK 802
Query: 369 KLIGK 373
+I +
Sbjct: 803 HMISQ 807