Miyakogusa Predicted Gene

Lj0g3v0258629.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0258629.1 Non Chatacterized Hit- tr|G8A2X7|G8A2X7_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,42,2e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; EUKARYOTIC
TRANSLATION INITIATION FACTOR 3 SUBUNIT (EIF-3),NULL,CUFF.17021.1
         (433 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G28080.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   426   e-119
AT1G01320.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   302   3e-82
AT1G01320.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   302   3e-82
AT1G15290.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like su...   268   6e-72

>AT4G28080.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr4:13948993-13957840 REVERSE
           LENGTH=1819
          Length = 1819

 Score =  426 bits (1095), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/432 (52%), Positives = 271/432 (62%), Gaps = 5/432 (1%)

Query: 1   MKAFTEHNKFGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXXXXXXXXXKHEK 60
           MKAF EHNKFGNLPYGFRANTW               LP+EDE W           K++K
Sbjct: 289 MKAFIEHNKFGNLPYGFRANTWVVPPVVADSPSTFPSLPVEDETWGGDGGGVGRSGKYDK 348

Query: 61  RQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKHFIDNTQRSFSS 120
           R+W ++FAILAAMPC+T EERQ+RDRKAFLLHSLFVDVSV KAV  IK  ++N Q S   
Sbjct: 349 RKWAKEFAILAAMPCKTPEERQVRDRKAFLLHSLFVDVSVFKAVEIIKKIVENNQCSLKD 408

Query: 121 TATPTSYEEIAGDLTIKVTRDVSDASIKLDCKNDGNLVLELSEKELAQRNLLKGITADES 180
            A    +EE  GDL ++V RD  DAS KLD K+DG  VLE+S++ELAQRNLLKGITADES
Sbjct: 409 PAALGFHEERIGDLIVRVARDDPDASAKLDRKSDGTQVLEISQEELAQRNLLKGITADES 468

Query: 181 ATVHDTPTLGAVIIRHCGYTALVKVSAKTDWEGSPNSLEIDIEDQPEGGANALNVNSLRM 240
           ATVHDT TLG V++RHCG TA+VKV+++          +IDIEDQ EGGANALNVNSLR 
Sbjct: 469 ATVHDTSTLGVVVVRHCGCTAIVKVASEFKLNDGHILQDIDIEDQSEGGANALNVNSLRT 528

Query: 241 LLHKSSTPQSSNIIQRNQSTDIENXXXXXX--XXXXXXXXXXXXXXTTTHSKSIRWELGA 298
           LLHKSSTP  S++ QR+ + D E                        + +SK IRWELGA
Sbjct: 529 LLHKSSTP--SSLAQRSPNADSEQIRVAKSLVRKVIEDSLKKLEIEPSRYSKPIRWELGA 586

Query: 299 CWVQHLQNQATGXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXIDSRNSKVEQGKDIST 358
           CWVQHLQNQA+                V                ID + +K EQGK+ + 
Sbjct: 587 CWVQHLQNQASSKSESKKTEDPKPEPAVKGLGKQGALLKEIKRKIDVKANKTEQGKE-AP 645

Query: 359 CNGIDINKPDATQQELERQGEEKETLWKTLLPDAAYTRLKESKTDLHLKSPDELMEMAHK 418
            N  D       Q+ELE+Q EE E +WK L+ + AY RLKES+T  HLKSP EL+EMA K
Sbjct: 646 ANDTDNTSETEDQKELEKQNEEIEKMWKELVTETAYQRLKESETGFHLKSPKELIEMARK 705

Query: 419 YYIDTALPKLVS 430
           YY DTALPKLV+
Sbjct: 706 YYTDTALPKLVA 717


>AT1G01320.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:121582-130099 REVERSE
           LENGTH=1797
          Length = 1797

 Score =  302 bits (774), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 172/433 (39%), Positives = 234/433 (54%), Gaps = 8/433 (1%)

Query: 1   MKAFTEHNKFGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXXXXXXXXXKHEK 60
           +KAF+E NKFGNLPYGFRANTW               LP+EDE W            ++ 
Sbjct: 264 LKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERWGGDGGGQGRDGSYDL 323

Query: 61  RQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKHFIDNTQRSFSS 120
             W  +FA +A+MPC+TAEERQ+RDRK FLLH+LFVDV+  +A+ A++  +   +   + 
Sbjct: 324 VPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVM--AEPVLAE 381

Query: 121 TATPTSYEEIAGDLTIKVTRDVSDASIKLDCKNDGNLVLELSEKELAQRNLLKGITADES 180
             +   Y E   DLT+ VTRD S+AS K+D K DG     L +K+L +RNLLKG+TADE+
Sbjct: 382 EDSEVLYSETVRDLTVTVTRDTSNASSKVDTKIDGIQATGLDKKKLMERNLLKGLTADEN 441

Query: 181 ATVHDTPTLGAVIIRHCGYTALVKVSAKTDWEGSPNSLEIDIEDQPEGGANALNVNSLRM 240
              HD  TLG + +++CGY A+VK+  +++ E SP S  +D+ +QPEGGANALN+NSLR 
Sbjct: 442 TAAHDVATLGTISLKYCGYIAVVKLEKESE-ELSPPSQIVDLLEQPEGGANALNINSLRF 500

Query: 241 LLHKSSTPQSSNIIQRNQSTDIENXXXXXXXXXXXXXXXXXXXXTTTHSKSIRWELGACW 300
           LLHKSS  Q+    Q  Q  D                              +RWELGACW
Sbjct: 501 LLHKSSPEQNKKTPQ--QHDDELTSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACW 558

Query: 301 VQHLQNQA-TGXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXIDSRNSKVEQGKDISTC 359
           +QHLQ+Q  T                V                 D  + K  Q    S  
Sbjct: 559 IQHLQDQKNTEKDKKQTGEKSKNELKVEGLGKPLKSLNSSKKKTDVSSPKTPQTALSSQV 618

Query: 360 NGI--DINKPDATQQELERQGEEKETLWKTLLPDAAYTRLKESKTDLHLKSPDELMEMAH 417
           + +  + +   + Q + E+  +E   + K LL DAA+TRLKES T LH KS  EL+++A 
Sbjct: 619 DAVSSEADTAASLQSDAEKNAQENVLILKNLLSDAAFTRLKESDTGLHHKSLQELVDLAQ 678

Query: 418 KYYIDTALPKLVS 430
            YY + A+PKLV+
Sbjct: 679 NYYTEVAIPKLVA 691


>AT1G01320.2 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:121582-130099 REVERSE
           LENGTH=1787
          Length = 1787

 Score =  302 bits (773), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 172/433 (39%), Positives = 234/433 (54%), Gaps = 8/433 (1%)

Query: 1   MKAFTEHNKFGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXXXXXXXXXKHEK 60
           +KAF+E NKFGNLPYGFRANTW               LP+EDE W            ++ 
Sbjct: 264 LKAFSERNKFGNLPYGFRANTWLIPPTAAQSPAAFPPLPVEDERWGGDGGGQGRDGSYDL 323

Query: 61  RQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKHFIDNTQRSFSS 120
             W  +FA +A+MPC+TAEERQ+RDRK FLLH+LFVDV+  +A+ A++  +   +   + 
Sbjct: 324 VPWSNEFAFIASMPCKTAEERQVRDRKVFLLHNLFVDVATFRAIKAVQKVM--AEPVLAE 381

Query: 121 TATPTSYEEIAGDLTIKVTRDVSDASIKLDCKNDGNLVLELSEKELAQRNLLKGITADES 180
             +   Y E   DLT+ VTRD S+AS K+D K DG     L +K+L +RNLLKG+TADE+
Sbjct: 382 EDSEVLYSETVRDLTVTVTRDTSNASSKVDTKIDGIQATGLDKKKLMERNLLKGLTADEN 441

Query: 181 ATVHDTPTLGAVIIRHCGYTALVKVSAKTDWEGSPNSLEIDIEDQPEGGANALNVNSLRM 240
              HD  TLG + +++CGY A+VK+  +++ E SP S  +D+ +QPEGGANALN+NSLR 
Sbjct: 442 TAAHDVATLGTISLKYCGYIAVVKLEKESE-ELSPPSQIVDLLEQPEGGANALNINSLRF 500

Query: 241 LLHKSSTPQSSNIIQRNQSTDIENXXXXXXXXXXXXXXXXXXXXTTTHSKSIRWELGACW 300
           LLHKSS  Q+    Q  Q  D                              +RWELGACW
Sbjct: 501 LLHKSSPEQNKKTPQ--QHDDELTSSREFVSKMLEESIAKLEGEEIDRDSIMRWELGACW 558

Query: 301 VQHLQNQA-TGXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXIDSRNSKVEQGKDISTC 359
           +QHLQ+Q  T                V                 D  + K  Q    S  
Sbjct: 559 IQHLQDQKNTEKDKKQTGEKSKNELKVEGLGKPLKSLNSSKKKTDVSSPKTPQTALSSQV 618

Query: 360 NGI--DINKPDATQQELERQGEEKETLWKTLLPDAAYTRLKESKTDLHLKSPDELMEMAH 417
           + +  + +   + Q + E+  +E   + K LL DAA+TRLKES T LH KS  EL+++A 
Sbjct: 619 DAVSSEADTAASLQSDAEKNAQENVLILKNLLSDAAFTRLKESDTGLHHKSLQELVDLAQ 678

Query: 418 KYYIDTALPKLVS 430
            YY + A+PKLV+
Sbjct: 679 NYYTEVAIPKLVA 691


>AT1G15290.1 | Symbols:  | Tetratricopeptide repeat (TPR)-like
           superfamily protein | chr1:5257327-5264814 REVERSE
           LENGTH=1608
          Length = 1608

 Score =  268 bits (685), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 174/453 (38%), Positives = 235/453 (51%), Gaps = 56/453 (12%)

Query: 1   MKAFTEHNKFGNLPYGFRANTWXXXXXXXXXXXXXXXLPMEDEIWXXXXXXXXXXXKHEK 60
           MKAFT+ NKFGNLP+G R+NTW               LP EDE W           +++ 
Sbjct: 251 MKAFTDRNKFGNLPFGLRSNTWLVPSPVSESASP---LPTEDEHWGGNGGGQGRNGEYDH 307

Query: 61  RQWGRDFAILAAMPCQTAEERQLRDRKAFLLHSLFVDVSVSKAVSAIKHFIDNTQRSFSS 120
           R W  +F++LA +PC+T EER +RD+KAFLLHS F+D SV +AV AI + +D  Q++  +
Sbjct: 308 RPWAAEFSVLATLPCKTEEERVIRDKKAFLLHSQFIDTSVQRAVRAICNVMDTNQQTSGT 367

Query: 121 TATPTS---YEEIAGDLTIKVTRDVSDASIKLDCKNDG---NLVLELSEKELAQRNLLKG 174
           T  P      E+  GDL+I V RD++     LD K +    N    LS +ELA+RNLLKG
Sbjct: 368 TDLPAGSILLEDHVGDLSIVVKRDIA----SLDSKPEATFQNDAFVLSSEELAERNLLKG 423

Query: 175 ITADESATVHDTPTLGAVIIRHCGYTALVKVSAKTDWEGSPNSLEIDIEDQPEGGANALN 234
           ITADES  VHDTP LG VI+R CGYTA+V V  +T    S +  +I I+D P+GGANALN
Sbjct: 424 ITADESVIVHDTPALGKVIVRQCGYTAVVNVKGQTQKAMS-DFRDILIDDLPDGGANALN 482

Query: 235 VNSLRMLLHKSSTPQSSNIIQRNQST-----DIENXXXXXXXXXXXXXXXXXXXXTTTHS 289
           +NSLR+  H+   P S      NQ T     D+E+                     ++  
Sbjct: 483 LNSLRVEFHR---PHSVGTSVENQPTQLDWDDLESYRCIIQELVKINLTKLEETRVSS-V 538

Query: 290 KSIRWELGACWVQHLQNQATGXXXXXXXXXXXXXXXVXXXXXXXXXXXXXXXXIDSRNSK 349
           + IRWELG+ WVQHLQ + T                                   S    
Sbjct: 539 RPIRWELGSTWVQHLQKKETDVCGKPATNDETEL---------------------SVKGL 577

Query: 350 VEQGKDISTC-----NGIDINKPDATQQELERQGEEKE-------TLWKTLLPDAAYTRL 397
            +Q KD+ +      N   +N+ D    EL  + +  +       T  K LL + A++RL
Sbjct: 578 GKQFKDLKSKSKKSENISAVNEKDTRLHELNEEDDLGQKSIDGLFTELKELLSEEAFSRL 637

Query: 398 KESKTDLHLKSPDELMEMAHKYYIDTALPKLVS 430
           KE+ T LHLKS +EL  MA+ YY + ALP+LV+
Sbjct: 638 KETGTGLHLKSKEELTNMAYGYYDEIALPRLVA 670