Miyakogusa Predicted Gene
- Lj0g3v0258459.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0258459.3 Non Chatacterized Hit- tr|Q8GXL0|Q8GXL0_ARATH
Putative villin 1 VLN1 OS=Arabidopsis thaliana
GN=At2g,30.48,0.004,seg,NULL; GELSOLIN,Gelsolin; no description,NULL;
Gelsolin homology domain,Gelsolin; VILLIN 1-4,NULL,CUFF.17403.3
(155 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G41740.1 | Symbols: VLN2, ATVLN2 | villin 2 | chr2:17410962-1... 171 1e-43
AT3G57410.1 | Symbols: VLN3, ATVLN3 | villin 3 | chr3:21243615-2... 163 5e-41
AT5G57320.1 | Symbols: VLN5 | villin, putative | chr5:23212690-2... 103 6e-23
AT4G30160.1 | Symbols: VLN4, ATVLN4 | villin 4 | chr4:14754528-1... 100 7e-22
AT4G30160.2 | Symbols: VLN4 | villin 4 | chr4:14754528-14759511 ... 98 2e-21
AT2G29890.1 | Symbols: VLN1, ATVLN1 | villin-like 1 | chr2:12744... 92 1e-19
AT2G29890.2 | Symbols: VLN1, ATVLN1 | villin-like 1 | chr2:12744... 91 3e-19
AT2G29890.3 | Symbols: VLN1 | villin-like 1 | chr2:12744597-1274... 91 3e-19
>AT2G41740.1 | Symbols: VLN2, ATVLN2 | villin 2 |
chr2:17410962-17416878 REVERSE LENGTH=976
Length = 976
Score = 171 bits (434), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 80/125 (64%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
Query: 16 KVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAASLEGL 75
+VEE+YNF+Q HAEVF+W+G V+PKEKQ FEIGQKYID+A SLEGL
Sbjct: 634 QVEEIYNFAQDDLLTEDIYFLDTHAEVFVWVGQCVEPKEKQTVFEIGQKYIDLAGSLEGL 693
Query: 76 SLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEKSNGSSLG 135
VP+YK+ EGNEPCFFTTYFSWD KA++QGNSFQKK SLLFG H VE+KSNG +
Sbjct: 694 HPKVPIYKINEGNEPCFFTTYFSWDATKAIVQGNSFQKKASLLFGTHHVVEDKSNGGNQ- 752
Query: 136 GARQR 140
G RQR
Sbjct: 753 GLRQR 757
>AT3G57410.1 | Symbols: VLN3, ATVLN3 | villin 3 |
chr3:21243615-21249809 REVERSE LENGTH=965
Length = 965
Score = 163 bits (412), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 91/125 (72%), Gaps = 1/125 (0%)
Query: 16 KVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAASLEGL 75
+VEE++NF Q HAEVF+W+G VDPKEKQ FEIGQ+YI++A SLEGL
Sbjct: 636 QVEEIHNFDQDDLLTEEMHLLDTHAEVFVWVGQCVDPKEKQTAFEIGQRYINLAGSLEGL 695
Query: 76 SLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEKSNGSSLG 135
S VPLYK+TEGNEPCFFTTYFSWD KA +QGNS+QKK +LL G H VE++S+ S
Sbjct: 696 SPKVPLYKITEGNEPCFFTTYFSWDSTKATVQGNSYQKKAALLLGTHHVVEDQSS-SGNQ 754
Query: 136 GARQR 140
G RQR
Sbjct: 755 GPRQR 759
>AT5G57320.1 | Symbols: VLN5 | villin, putative |
chr5:23212690-23217549 FORWARD LENGTH=962
Length = 962
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 70/114 (61%)
Query: 15 VKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAASLEG 74
+K E++NF+Q H EVF+W+G VDPK+K +IG+ ++ LE
Sbjct: 636 LKATEIFNFTQDDLMTEDIFILDCHTEVFVWVGQQVDPKKKPQALDIGENFLKHDFLLEN 695
Query: 75 LSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEK 128
L+ P+Y VTEGNEP FFT +F+WD +K+ + G+SFQ+K+++L G + +K
Sbjct: 696 LASETPIYIVTEGNEPPFFTRFFTWDSSKSGMHGDSFQRKLAILTNKGKPLLDK 749
>AT4G30160.1 | Symbols: VLN4, ATVLN4 | villin 4 |
chr4:14754528-14759511 FORWARD LENGTH=974
Length = 974
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 4/128 (3%)
Query: 13 HLVKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAASL 72
++KV E+YNF+Q H+E+F+W+G V PK K IG+K+I+ + L
Sbjct: 632 EVLKVTEIYNFTQDDLMTEDIFIIDCHSEIFVWVGQEVVPKNKLLALTIGEKFIEKDSLL 691
Query: 73 EGLSLHVPLYKVTEGNEPCFFTTYF-SWDHAKALIQGNSFQKKVSLLFGVGHAVEEKS-- 129
E LS P+Y + EG EP FFT +F SWD +K+ + GNSFQ+K+ ++ G V +K
Sbjct: 692 EKLSPEAPIYVIMEGGEPSFFTRFFTSWDSSKSAMHGNSFQRKLKIVKNGGTPVADKPKR 751
Query: 130 -NGSSLGG 136
+S GG
Sbjct: 752 RTPASYGG 759
>AT4G30160.2 | Symbols: VLN4 | villin 4 | chr4:14754528-14759511
FORWARD LENGTH=983
Length = 983
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
Query: 3 LLETHICLLSHLVKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIG 62
+L+ I L S V E+YNF+Q H+E+F+W+G V PK K IG
Sbjct: 633 VLKVRILLKSFFVT--EIYNFTQDDLMTEDIFIIDCHSEIFVWVGQEVVPKNKLLALTIG 690
Query: 63 QKYIDMAASLEGLSLHVPLYKVTEGNEPCFFTTYF-SWDHAKALIQGNSFQKKVSLLFGV 121
+K+I+ + LE LS P+Y + EG EP FFT +F SWD +K+ + GNSFQ+K+ ++
Sbjct: 691 EKFIEKDSLLEKLSPEAPIYVIMEGGEPSFFTRFFTSWDSSKSAMHGNSFQRKLKIVKNG 750
Query: 122 GHAVEEKS---NGSSLGG 136
G V +K +S GG
Sbjct: 751 GTPVADKPKRRTPASYGG 768
>AT2G29890.1 | Symbols: VLN1, ATVLN1 | villin-like 1 |
chr2:12744597-12749474 FORWARD LENGTH=909
Length = 909
Score = 92.4 bits (228), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 12 SHLVKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAAS 71
S ++KV+E+YNF Q +EV++WIG + + K K+ +G K+++M
Sbjct: 628 SDVLKVKEIYNFVQDDLTTEDVFLLDCQSEVYVWIGSNSNIKSKEEALTLGLKFLEMDIL 687
Query: 72 LEGLSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEKSNG 131
EGL++ P+Y VTEG+EP FFT +F W KA + GNSF++K++ L G + ++S+G
Sbjct: 688 EEGLTMRTPVYVVTEGHEPPFFTRFFEWVPEKANMHGNSFERKLASLKGKKTST-KRSSG 746
Query: 132 S 132
S
Sbjct: 747 S 747
>AT2G29890.2 | Symbols: VLN1, ATVLN1 | villin-like 1 |
chr2:12744597-12749474 FORWARD LENGTH=911
Length = 911
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 12 SHLVKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAAS 71
+ ++KV+E+YNF Q +EV++WIG + + K K+ +G K+++M
Sbjct: 630 NDVLKVKEIYNFVQDDLTTEDVFLLDCQSEVYVWIGSNSNIKSKEEALTLGLKFLEMDIL 689
Query: 72 LEGLSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEKSNG 131
EGL++ P+Y VTEG+EP FFT +F W KA + GNSF++K++ L G + ++S+G
Sbjct: 690 EEGLTMRTPVYVVTEGHEPPFFTRFFEWVPEKANMHGNSFERKLASLKGKKTST-KRSSG 748
Query: 132 S 132
S
Sbjct: 749 S 749
>AT2G29890.3 | Symbols: VLN1 | villin-like 1 |
chr2:12744597-12749474 FORWARD LENGTH=933
Length = 933
Score = 91.3 bits (225), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 12 SHLVKVEEVYNFSQXXXXXXXXXXXXXHAEVFIWIGHSVDPKEKQNTFEIGQKYIDMAAS 71
+ ++KV+E+YNF Q +EV++WIG + + K K+ +G K+++M
Sbjct: 630 NDVLKVKEIYNFVQDDLTTEDVFLLDCQSEVYVWIGSNSNIKSKEEALTLGLKFLEMDIL 689
Query: 72 LEGLSLHVPLYKVTEGNEPCFFTTYFSWDHAKALIQGNSFQKKVSLLFGVGHAVEEKSNG 131
EGL++ P+Y VTEG+EP FFT +F W KA + GNSF++K++ L G + ++S+G
Sbjct: 690 EEGLTMRTPVYVVTEGHEPPFFTRFFEWVPEKANMHGNSFERKLASLKGKKTST-KRSSG 748
Query: 132 S 132
S
Sbjct: 749 S 749