Miyakogusa Predicted Gene
- Lj0g3v0258229.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0258229.1 Non Chatacterized Hit- tr|I3SUR7|I3SUR7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,SUBFAMILY
NOT NAMED,NULL; RING ZINC FINGER PROTEIN,NULL; RING/U-box,NULL;
ZF_RING_2,Zinc finger, RIN,CUFF.16979.1
(293 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 303 1e-82
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 303 1e-82
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 303 1e-82
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 265 2e-71
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 265 2e-71
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 265 2e-71
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 146 1e-35
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 140 1e-33
AT1G60360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 120 1e-27
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 118 4e-27
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 118 4e-27
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 118 4e-27
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 115 3e-26
AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A | chr2:1656750... 114 6e-26
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 113 2e-25
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 110 1e-24
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 110 1e-24
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 110 2e-24
AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 108 4e-24
AT5G01980.1 | Symbols: | RING/U-box superfamily protein | chr5:... 106 1e-23
AT1G68180.1 | Symbols: | RING/U-box superfamily protein | chr1:... 92 3e-19
AT5G15820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 87 1e-17
AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein | c... 85 5e-17
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 84 1e-16
AT3G60080.1 | Symbols: | RING/U-box superfamily protein | chr3:... 83 3e-16
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 82 5e-16
AT5G60820.1 | Symbols: | RING/U-box superfamily protein | chr5:... 81 8e-16
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 79 3e-15
AT2G44330.1 | Symbols: | RING/U-box superfamily protein | chr2:... 79 4e-15
AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 | chr5:... 77 1e-14
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 76 3e-14
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 68 6e-12
AT5G02750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 5e-10
AT1G18780.1 | Symbols: | RING/U-box superfamily protein | chr1:... 60 2e-09
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 60 2e-09
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 60 2e-09
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 60 2e-09
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 60 2e-09
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 59 3e-09
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 3e-09
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 59 3e-09
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 5e-09
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 58 6e-09
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 58 6e-09
AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 58 7e-09
AT1G73760.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 8e-09
AT1G04790.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 8e-09
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 58 8e-09
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 8e-09
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 57 1e-08
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 2e-08
AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 57 2e-08
AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 57 2e-08
AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily p... 56 2e-08
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 56 4e-08
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 4e-08
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 4e-08
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 55 5e-08
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 5e-08
AT2G29840.1 | Symbols: | RING/U-box superfamily protein | chr2:... 55 5e-08
AT5G10650.2 | Symbols: | RING/U-box superfamily protein | chr5:... 55 5e-08
AT5G10650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 5e-08
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 55 7e-08
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 55 7e-08
AT1G21960.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 7e-08
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 7e-08
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 7e-08
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 55 8e-08
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 8e-08
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 9e-08
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 1e-07
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 54 1e-07
AT2G15580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 54 1e-07
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 54 1e-07
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 54 2e-07
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 54 2e-07
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 54 2e-07
AT5G24870.2 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT5G24870.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 54 2e-07
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 2e-07
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 2e-07
AT4G31450.1 | Symbols: | RING/U-box superfamily protein | chr4:... 53 2e-07
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 2e-07
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 53 3e-07
AT1G17970.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 53 3e-07
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 3e-07
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 53 3e-07
AT5G54990.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 4e-07
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 52 4e-07
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 52 4e-07
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 52 4e-07
AT1G18770.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 4e-07
AT3G13228.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 5e-07
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 5e-07
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 5e-07
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 6e-07
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 6e-07
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 52 7e-07
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 7e-07
AT4G12190.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 9e-07
AT3G15070.2 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT3G15070.1 | Symbols: | RING/U-box superfamily protein | chr3:... 51 1e-06
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 51 1e-06
AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 51 1e-06
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 51 1e-06
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 51 1e-06
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 1e-06
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 50 1e-06
AT1G74620.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 1e-06
AT1G35625.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 1e-06
AT3G16090.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 1e-06
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 50 2e-06
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 50 2e-06
AT4G12210.1 | Symbols: | RING/U-box superfamily protein | chr4:... 50 2e-06
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 50 2e-06
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 50 2e-06
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 50 2e-06
AT3G15740.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 2e-06
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 50 2e-06
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 50 2e-06
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 2e-06
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 3e-06
AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B | chr2:... 50 3e-06
AT4G14220.1 | Symbols: RHF1A | RING-H2 group F1A | chr4:8196012-... 49 3e-06
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 49 3e-06
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 3e-06
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 49 4e-06
AT5G07225.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 4e-06
AT1G53190.2 | Symbols: | RING/U-box superfamily protein | chr1:... 49 4e-06
AT1G53190.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 4e-06
AT4G05350.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 4e-06
AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A | chr1:5193703... 49 4e-06
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 5e-06
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 5e-06
AT5G41350.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 5e-06
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 49 5e-06
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 7e-06
AT2G15530.3 | Symbols: | RING/U-box superfamily protein | chr2:... 48 7e-06
AT2G15530.2 | Symbols: | RING/U-box superfamily protein | chr2:... 48 7e-06
AT2G15530.1 | Symbols: | RING/U-box superfamily protein | chr2:... 48 7e-06
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 8e-06
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 48 8e-06
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 8e-06
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 48 8e-06
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 48 8e-06
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 48 9e-06
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 48 1e-05
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 201/303 (66%), Gaps = 16/303 (5%)
Query: 1 MSNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNE-EHGQ 59
MS+SRNTHWCH C+R VRL ++ +C C GFV+ELD M +P D+ E Q
Sbjct: 1 MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQ 59
Query: 60 RFGLMETFSGFMRHQMGNRSHRHDIRAQP-DSIPEQGAGFAPLLIFGGQIPFRLSGHGGI 118
F LM+ FS FMR+++ RSH +IR + S PE G APLLIFGGQ+P+RL+G +
Sbjct: 60 TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 119
Query: 119 EALFNG-APGIGMTRGNTGDYFIGPGLEEMFEQLSI-NNQQGPPPASRSSIDALPTIRIV 176
EALFNG +PGIG+TRGNTGDYF GPGLEE+FEQLS ++GPPPA RS+IDALPTI+I
Sbjct: 120 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 179
Query: 177 KRHLRS-DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP---- 231
+RHLRS DS+CP+CK++FELGSEA+QMPC H+YH DCIVPWLV+HNSCPVCRQELP
Sbjct: 180 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 239
Query: 232 ---PQVLXXXXXXXXXXXXXXXXXXXXXXQGRRNPFSFLWPFR---SSISGSNNRATGRT 285
Q RRNPFS WPFR SS S + NR R
Sbjct: 240 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 299
Query: 286 STT 288
S T
Sbjct: 300 SDT 302
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 201/303 (66%), Gaps = 16/303 (5%)
Query: 1 MSNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNE-EHGQ 59
MS+SRNTHWCH C+R VRL ++ +C C GFV+ELD M +P D+ E Q
Sbjct: 1 MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQ 59
Query: 60 RFGLMETFSGFMRHQMGNRSHRHDIRAQP-DSIPEQGAGFAPLLIFGGQIPFRLSGHGGI 118
F LM+ FS FMR+++ RSH +IR + S PE G APLLIFGGQ+P+RL+G +
Sbjct: 60 TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 119
Query: 119 EALFNG-APGIGMTRGNTGDYFIGPGLEEMFEQLSI-NNQQGPPPASRSSIDALPTIRIV 176
EALFNG +PGIG+TRGNTGDYF GPGLEE+FEQLS ++GPPPA RS+IDALPTI+I
Sbjct: 120 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 179
Query: 177 KRHLRS-DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP---- 231
+RHLRS DS+CP+CK++FELGSEA+QMPC H+YH DCIVPWLV+HNSCPVCRQELP
Sbjct: 180 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 239
Query: 232 ---PQVLXXXXXXXXXXXXXXXXXXXXXXQGRRNPFSFLWPFR---SSISGSNNRATGRT 285
Q RRNPFS WPFR SS S + NR R
Sbjct: 240 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 299
Query: 286 STT 288
S T
Sbjct: 300 SDT 302
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 303 bits (775), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 201/303 (66%), Gaps = 16/303 (5%)
Query: 1 MSNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNE-EHGQ 59
MS+SRNTHWCH C+R VRL ++ +C C GFV+ELD M +P D+ E Q
Sbjct: 1 MSSSRNTHWCHRCQRAVRLHGQEPVCFYCGGGFVEELD-MAQASPFDMFRSHRGVVERDQ 59
Query: 60 RFGLMETFSGFMRHQMGNRSHRHDIRAQP-DSIPEQGAGFAPLLIFGGQIPFRLSGHGGI 118
F LM+ FS FMR+++ RSH +IR + S PE G APLLIFGGQ+P+RL+G +
Sbjct: 60 TFDLMDAFSVFMRNRLAERSHDREIRGRTISSGPENFPGLAPLLIFGGQVPYRLTGDNAV 119
Query: 119 EALFNG-APGIGMTRGNTGDYFIGPGLEEMFEQLSI-NNQQGPPPASRSSIDALPTIRIV 176
EALFNG +PGIG+TRGNTGDYF GPGLEE+FEQLS ++GPPPA RS+IDALPTI+I
Sbjct: 120 EALFNGGSPGIGITRGNTGDYFFGPGLEELFEQLSAGTTRRGPPPAPRSAIDALPTIKIA 179
Query: 177 KRHLRS-DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP---- 231
+RHLRS DS+CP+CK++FELGSEA+QMPC H+YH DCIVPWLV+HNSCPVCRQELP
Sbjct: 180 QRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSASG 239
Query: 232 ---PQVLXXXXXXXXXXXXXXXXXXXXXXQGRRNPFSFLWPFR---SSISGSNNRATGRT 285
Q RRNPFS WPFR SS S + NR R
Sbjct: 240 PSSSQNRTTPTRNYRSSSSSSSSNSRENGNERRNPFSSFWPFRSSGSSSSSTQNRGGTRN 299
Query: 286 STT 288
S T
Sbjct: 300 SDT 302
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/297 (51%), Positives = 189/297 (63%), Gaps = 21/297 (7%)
Query: 1 MSNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQR 60
MS+ RNTHWCH C+R V L RD++C C GFV+E+D + P + E
Sbjct: 1 MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID----IGPSRA---HRDVERDPT 53
Query: 61 FGLMETFSGFMRHQMGNRSHRHDIRAQPDSI-PEQGAGFAPLLIFGGQIPFRLSG--HGG 117
F LME FS FMR ++ RS+ +I + S E + APLLIFGGQ PFRL+G +
Sbjct: 54 FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 113
Query: 118 IEALFNGA-PGIGMTRG-NTGDYFIGPGLEEMFEQLSI-NNQQGPPPASRSSIDALPTIR 174
+EA NGA PGIG+ RG N GDYF GPGLEE+ EQLS + +GPPPA +SSIDALPTI+
Sbjct: 114 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 173
Query: 175 IVKRHLRS-DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
I ++HL+S DSHCP+CK++FEL SEA+QMPC H+YH DCIVPWLV+HNSCPVCR+ELP +
Sbjct: 174 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 233
Query: 234 VLXXXXXXXXXXXXXXXXXXXXXXQGRRNPFSFLWPFRSSISGS--NNRATGRTSTT 288
RRN FS LWPFRSS S S N R T T+T
Sbjct: 234 GSSSSTQSSQNRSTNGRENSR-----RRNIFSNLWPFRSSSSSSTQNRRDTNNTATA 285
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/297 (51%), Positives = 189/297 (63%), Gaps = 21/297 (7%)
Query: 1 MSNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQR 60
MS+ RNTHWCH C+R V L RD++C C GFV+E+D + P + E
Sbjct: 1 MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID----IGPSRA---HRDVERDPT 53
Query: 61 FGLMETFSGFMRHQMGNRSHRHDIRAQPDSI-PEQGAGFAPLLIFGGQIPFRLSG--HGG 117
F LME FS FMR ++ RS+ +I + S E + APLLIFGGQ PFRL+G +
Sbjct: 54 FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 113
Query: 118 IEALFNGA-PGIGMTRG-NTGDYFIGPGLEEMFEQLSI-NNQQGPPPASRSSIDALPTIR 174
+EA NGA PGIG+ RG N GDYF GPGLEE+ EQLS + +GPPPA +SSIDALPTI+
Sbjct: 114 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 173
Query: 175 IVKRHLRS-DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
I ++HL+S DSHCP+CK++FEL SEA+QMPC H+YH DCIVPWLV+HNSCPVCR+ELP +
Sbjct: 174 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 233
Query: 234 VLXXXXXXXXXXXXXXXXXXXXXXQGRRNPFSFLWPFRSSISGS--NNRATGRTSTT 288
RRN FS LWPFRSS S S N R T T+T
Sbjct: 234 GSSSSTQSSQNRSTNGRENSR-----RRNIFSNLWPFRSSSSSSTQNRRDTNNTATA 285
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/297 (51%), Positives = 189/297 (63%), Gaps = 21/297 (7%)
Query: 1 MSNSRNTHWCHSCRRPVRLGWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQR 60
MS+ RNTHWCH C+R V L RD++C C GFV+E+D + P + E
Sbjct: 1 MSSIRNTHWCHRCQRAVWLRARDAVCSYCGGGFVEEID----IGPSRA---HRDVERDPT 53
Query: 61 FGLMETFSGFMRHQMGNRSHRHDIRAQPDSI-PEQGAGFAPLLIFGGQIPFRLSG--HGG 117
F LME FS FMR ++ RS+ +I + S E + APLLIFGGQ PFRL+G +
Sbjct: 54 FDLMEAFSAFMRSRLAERSYDREISGRLGSAGSESFSNLAPLLIFGGQAPFRLAGGDNSS 113
Query: 118 IEALFNGA-PGIGMTRG-NTGDYFIGPGLEEMFEQLSI-NNQQGPPPASRSSIDALPTIR 174
+EA NGA PGIG+ RG N GDYF GPGLEE+ EQLS + +GPPPA +SSIDALPTI+
Sbjct: 114 VEAFVNGAAPGIGIARGTNAGDYFFGPGLEELIEQLSSGTHHRGPPPAPKSSIDALPTIK 173
Query: 175 IVKRHLRS-DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
I ++HL+S DSHCP+CK++FEL SEA+QMPC H+YH DCIVPWLV+HNSCPVCR+ELP +
Sbjct: 174 ITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQHNSCPVCRKELPSR 233
Query: 234 VLXXXXXXXXXXXXXXXXXXXXXXQGRRNPFSFLWPFRSSISGS--NNRATGRTSTT 288
RRN FS LWPFRSS S S N R T T+T
Sbjct: 234 GSSSSTQSSQNRSTNGRENSR-----RRNIFSNLWPFRSSSSSSTQNRRDTNNTATA 285
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 127/244 (52%), Gaps = 25/244 (10%)
Query: 9 WCHSCRRPVRLGWR---DSICRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQRFGLME 65
+C+ C + V + D C CN+GF++E +D P L+ N F + +
Sbjct: 22 FCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNF----NPNSSDSFFPMAD 77
Query: 66 TFSGFMRHQMGNRSHRHD-----------IRAQPDSIPE--QGAGFAPLLIFGGQIPFRL 112
FS + G+ + ++ Q S + Q F P +
Sbjct: 78 PFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHLQTLR 137
Query: 113 SGHGGIEALFNGAPGIGMTR--GNTGDYFIGPGLEEMFEQLSIN--NQQGPPPASRSSID 168
S E + P R GN GDYF GPGLE++ +QL+ N N+ G PPAS+S+ID
Sbjct: 138 SSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAID 197
Query: 169 ALPTIRIVKRHLRSD-SHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
ALPT+++ K L+S+ + C +C ++FE GS+ +QMPCKH++H DC++PWL HNSCPVCR
Sbjct: 198 ALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCR 257
Query: 228 QELP 231
ELP
Sbjct: 258 FELP 261
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 140 bits (352), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 126/282 (44%), Gaps = 95/282 (33%)
Query: 5 RNTHWCHSCRRPVRL---GWRDSICRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQRF 61
+NTHWCH+CRR + L G R+ C C F++ L + V ++P DL GL E +R
Sbjct: 7 KNTHWCHTCRRGIHLQGEGRREGACIYCGNTFLERLYENVELSPFDLFGLAYEEARNRRN 66
Query: 62 GLMETFSGFMRHQMGNRSHRHDIRAQPDSIPEQGAGFAPLLIFGGQIPFRLSGHGGIEAL 121
+ G Q+ F E L
Sbjct: 67 NRRS-------------------------------------VIGEQLSF--------EEL 81
Query: 122 FNGAPGIGMTRGNTGDYFIGPGLEEMFEQLSINNQQGPPPASRSSIDALPTIRIVKRHLR 181
FN P + RG PPPAS ++I++L I+I ++HL
Sbjct: 82 FNRLPALQDRRG-------------------------PPPASLAAINSLQKIKIRQKHLG 116
Query: 182 SDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQVLXXXXXX 241
D +CP+C+++FE+GS+AR+MPCKH+YH +CI+PWLV+ N+CPVCR+ELP
Sbjct: 117 LDPYCPVCQDQFEIGSDARKMPCKHIYHSECILPWLVQRNTCPVCRKELP---------- 166
Query: 242 XXXXXXXXXXXXXXXXQGRRNPFSFLWPFRSSISGSNNRATG 283
R+NP LWPFRSS SN+ +
Sbjct: 167 ------------QDRNNSRKNPLWHLWPFRSSGLASNHNGSS 196
>AT1G60360.1 | Symbols: | RING/U-box superfamily protein |
chr1:22242748-22243731 REVERSE LENGTH=327
Length = 327
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 124/251 (49%), Gaps = 32/251 (12%)
Query: 8 HWCHSCRRPVRLGWRDS---ICRSCNEGFVQELD----------------DMVP-VNPLD 47
+WC+ C R VR+ + C C FV E++ D P L+
Sbjct: 24 YWCYHCDRMVRIASSNPSEIACPRCLRQFVVEIETRQRPRFTFNHATPPFDASPEARLLE 83
Query: 48 LVGLDNNEEHGQRFGLMETFSGFMRHQMGNRSHRHDIRAQPDSIPEQGAGFAPL-----L 102
+ L RFG R+ + S + S+ G PL +
Sbjct: 84 ALSLMFEPATIGRFGADPFLRARSRNILEPESRPRPQHRRRHSLDNVNNGGLPLPRRTYV 143
Query: 103 IFGGQIPFRLSGHGGIEALFNGAPGIGMTRGNTGDYFIGPG-LEEMFEQLSINNQQGPPP 161
I P S G I A N AP + N+ DYF G LE++ EQL+ +++ GPPP
Sbjct: 144 ILRPNNP--TSPLGNIIAPPNQAPPRHV---NSHDYFTGASSLEQLIEQLTQDDRPGPPP 198
Query: 162 ASRSSIDALPTIRIVKRHLRSD-SHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRH 220
AS +I++LP+++I +HL +D S C +C E+F +G +A ++PCKH+YH DCIVPWL +
Sbjct: 199 ASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLN 258
Query: 221 NSCPVCRQELP 231
NSCP+CR++LP
Sbjct: 259 NSCPICRRDLP 269
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 123/278 (44%), Gaps = 62/278 (22%)
Query: 4 SRNTHWCHSCRRPVRLGWRDSI--CRSCNEGFVQEL---DDMVPVN----PLDLVGLDNN 54
S ++WCH C R V +D I C C GFV+E+ DD + P+ + ++NN
Sbjct: 5 SETSYWCHMCSRSVIPLIQDEIIKCNFCQSGFVEEMDNNDDHQAADSLWTPILMEMMNNN 64
Query: 55 EEHGQRFGLMETFSGFMRHQMG----------NRSHRHDIRAQPDSI------------- 91
H Q E + + N DI Q + I
Sbjct: 65 --HDQHSTNQEDSESILEDEDEDEDDGDDGDQNNDGEIDITHQLEEIRRIRTRHSTAIVN 122
Query: 92 ---------------PEQGAGFAPLLIFGGQIPFRLSGHGGIEALFNGAPGIGMTRGNTG 136
E + L++ R+ H + + G+ G
Sbjct: 123 LLQGIRAGLLIESENNEDNPDNSELVVLINSFNQRIRVHQ------DSVDTTSVPSGSLG 176
Query: 137 DYFIGPGLEEMFEQLS---INNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKF 193
DYFIGPG E + ++L+ +NN+ G PPA++ +++AL ++I L+ C +C + F
Sbjct: 177 DYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ----CSVCLDDF 232
Query: 194 ELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
E+G EA++MPCKH +H DC++PWL H+SCPVCR LP
Sbjct: 233 EIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLP 270
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 123/278 (44%), Gaps = 62/278 (22%)
Query: 4 SRNTHWCHSCRRPVRLGWRDSI--CRSCNEGFVQEL---DDMVPVN----PLDLVGLDNN 54
S ++WCH C R V +D I C C GFV+E+ DD + P+ + ++NN
Sbjct: 5 SETSYWCHMCSRSVIPLIQDEIIKCNFCQSGFVEEMDNNDDHQAADSLWTPILMEMMNNN 64
Query: 55 EEHGQRFGLMETFSGFMRHQMG----------NRSHRHDIRAQPDSI------------- 91
H Q E + + N DI Q + I
Sbjct: 65 --HDQHSTNQEDSESILEDEDEDEDDGDDGDQNNDGEIDITHQLEEIRRIRTRHSTAIVN 122
Query: 92 ---------------PEQGAGFAPLLIFGGQIPFRLSGHGGIEALFNGAPGIGMTRGNTG 136
E + L++ R+ H + + G+ G
Sbjct: 123 LLQGIRAGLLIESENNEDNPDNSELVVLINSFNQRIRVHQ------DSVDTTSVPSGSLG 176
Query: 137 DYFIGPGLEEMFEQLS---INNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKF 193
DYFIGPG E + ++L+ +NN+ G PPA++ +++AL ++I L+ C +C + F
Sbjct: 177 DYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ----CSVCLDDF 232
Query: 194 ELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
E+G EA++MPCKH +H DC++PWL H+SCPVCR LP
Sbjct: 233 EIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLP 270
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 123/278 (44%), Gaps = 62/278 (22%)
Query: 4 SRNTHWCHSCRRPVRLGWRDSI--CRSCNEGFVQEL---DDMVPVN----PLDLVGLDNN 54
S ++WCH C R V +D I C C GFV+E+ DD + P+ + ++NN
Sbjct: 5 SETSYWCHMCSRSVIPLIQDEIIKCNFCQSGFVEEMDNNDDHQAADSLWTPILMEMMNNN 64
Query: 55 EEHGQRFGLMETFSGFMRHQMG----------NRSHRHDIRAQPDSI------------- 91
H Q E + + N DI Q + I
Sbjct: 65 --HDQHSTNQEDSESILEDEDEDEDDGDDGDQNNDGEIDITHQLEEIRRIRTRHSTAIVN 122
Query: 92 ---------------PEQGAGFAPLLIFGGQIPFRLSGHGGIEALFNGAPGIGMTRGNTG 136
E + L++ R+ H + + G+ G
Sbjct: 123 LLQGIRAGLLIESENNEDNPDNSELVVLINSFNQRIRVHQ------DSVDTTSVPSGSLG 176
Query: 137 DYFIGPGLEEMFEQLS---INNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKF 193
DYFIGPG E + ++L+ +NN+ G PPA++ +++AL ++I L+ C +C + F
Sbjct: 177 DYFIGPGFETLLQRLAENDLNNRYGTPPATKEAVEALAMVKIEDSLLQ----CSVCLDDF 232
Query: 194 ELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
E+G EA++MPCKH +H DC++PWL H+SCPVCR LP
Sbjct: 233 EIGMEAKEMPCKHKFHSDCLLPWLELHSSCPVCRYLLP 270
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 115 bits (288), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 122/272 (44%), Gaps = 60/272 (22%)
Query: 8 HWCHSCRRPVRLGWRDSI-CRSCNEGFVQELD-----------DMVPVNPL--------- 46
+WCH C + V I C C GFV+E++ D+ N L
Sbjct: 9 YWCHMCSQTVNPVMEAEIKCPFCQSGFVEEMEDDDDHDSSDPADVRANNSLWAPILMELM 68
Query: 47 -------------------DLVGLDNNEEHGQR---FGLMETFSGFMRHQMGNRSHRHDI 84
+ V +NNE+ G+ + L E RH I
Sbjct: 69 NDPVRRRRNQSVESVEDNQNEVQTENNEDDGENDLDWQLQEILRRRRRHSAAVLQLLQGI 128
Query: 85 RAQPDSIPEQGAGFAPLLIFGGQIPFR---LSGHGGIEALFNGAPGIGMTRGNTGDYFIG 141
RA S+ + G GG P R ++ + N A + G+ GDYFIG
Sbjct: 129 RAGL-SVESESTGN------GGNNPGRVILINTSNQTITVQNSADMDSVPAGSLGDYFIG 181
Query: 142 PGLEEMFEQLSIN--NQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEA 199
PG E + ++L+ N N+ G PPA + +++AL T++I + C +C + FE+G+EA
Sbjct: 182 PGFEMLLQRLAENDPNRYGTPPAKKEAVEALATVKIEETL-----QCSVCLDDFEIGTEA 236
Query: 200 RQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
+ MPC H +H DC++PWL H+SCPVCR +LP
Sbjct: 237 KLMPCTHKFHSDCLLPWLELHSSCPVCRYQLP 268
>AT2G39720.1 | Symbols: RHC2A | RING-H2 finger C2A |
chr2:16567506-16568711 REVERSE LENGTH=401
Length = 401
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 118/251 (47%), Gaps = 27/251 (10%)
Query: 7 THWCHSCRRPVRLGWRDSI-CRSCNEGFVQELDDMVPVNPLDLVGLDNNEEHGQRFGLME 65
++WC+SC R V + DSI C C+ GF++ + + + P D +H R
Sbjct: 5 SYWCYSCSRFVWVS--DSISCPDCDGGFLELIQEPLDFTPSDSFTTTTTTQH--RSPTRF 60
Query: 66 TFSGFMRHQMGNRSHRHDIRAQPDSIPEQGAGFAP--LLIFGGQIPF---RLSGHGGIEA 120
H D P + + +P +++ G + G +
Sbjct: 61 PPPSSSSSTPSASMH-ADNSPTPTIVTRTRSNRSPNPVIVLRGSAAAPSSDVVSEGLDRS 119
Query: 121 LFNGAPGIGMTRG------NTGDYFIGPGLEEMFEQLS---INNQQGP-----PPASRSS 166
F G G + ++ +G G + + +Q+S +N + PPAS+S+
Sbjct: 120 AFQMYYDDGTDSGLRPLPPSMTEFLLGSGFDRLLDQISQIELNTNRNLRSCEHPPASKSA 179
Query: 167 IDALPTIRIVKRHLRSDS--HCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCP 224
I+ALP I I HL SDS HC +CKE F L S AR+MPC H+YHPDCI+PWL NSCP
Sbjct: 180 IEALPLIEIDPTHLLSDSQSHCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCP 239
Query: 225 VCRQELPPQVL 235
VCR ELP + L
Sbjct: 240 VCRHELPAEDL 250
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 71/98 (72%), Gaps = 7/98 (7%)
Query: 136 GDYFIGPGLEEMFEQLSIN--NQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKF 193
GDYFIGPGL+ + + L+ N N+QG PPA + +++ALPT++I++ C +C + F
Sbjct: 212 GDYFIGPGLDLLLQHLAENDPNRQGTPPARKEAVEALPTVKIME-----PLQCSVCLDDF 266
Query: 194 ELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
E G+EA++MPCKH +H CIVPWL H+SCPVCR ELP
Sbjct: 267 EKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCRFELP 304
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 73/121 (60%), Gaps = 12/121 (9%)
Query: 120 ALFNGAPGIGMTRGNT-----GDYFIGPGLEEMFEQLSINN--QQGPPPASRSSIDALPT 172
A+ G+ + R NT GDYF+G L+ + E L+ N+ + G PA + +D LPT
Sbjct: 173 AVVQGSTSLNQNRNNTSLSAIGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPT 232
Query: 173 IRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
++I + C IC + F+ GSEA++MPCKH +H CIVPWL H+SCPVCR ELPP
Sbjct: 233 VKISESL-----QCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPP 287
Query: 233 Q 233
Sbjct: 288 D 288
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 73/121 (60%), Gaps = 12/121 (9%)
Query: 120 ALFNGAPGIGMTRGNT-----GDYFIGPGLEEMFEQLSINN--QQGPPPASRSSIDALPT 172
A+ G+ + R NT GDYF+G L+ + E L+ N+ + G PA + +D LPT
Sbjct: 173 AVVQGSTSLNQNRNNTSLSAIGDYFVGSSLDHLLEHLADNDSIRHGSLPARKEVVDNLPT 232
Query: 173 IRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
++I + C IC + F+ GSEA++MPCKH +H CIVPWL H+SCPVCR ELPP
Sbjct: 233 VKISESL-----QCSICLDDFDKGSEAKEMPCKHKFHIRCIVPWLELHSSCPVCRYELPP 287
Query: 233 Q 233
Sbjct: 288 D 288
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/107 (46%), Positives = 70/107 (65%), Gaps = 7/107 (6%)
Query: 134 NTGDYFIGPGLEEMFEQLSINN-------QQGPPPASRSSIDALPTIRIVKRHLRSDSHC 186
+ + +G G E + EQLS + G PPAS+S+I++LP + I H+ S+++C
Sbjct: 140 SVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAIESLPRVEISDCHIGSEANC 199
Query: 187 PICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
+C E FE +EAR+MPCKH++H DCIVPWL NSCPVCR ELP +
Sbjct: 200 AVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCRFELPSE 246
>AT3G46620.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:17178837-17180024 REVERSE
LENGTH=395
Length = 395
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 28/242 (11%)
Query: 7 THWCHSCRRPVRLGWRDS------ICRSCNEGFVQELDD----MVPVNPLDLVGLDNNEE 56
++WC+SC R + + W D +C CN GF++E++D V P + + EE
Sbjct: 30 SYWCYSCTRFISV-WEDQDANAGVLCPYCNGGFIEEIEDSSNSTVAAIPASTPEVRSVEE 88
Query: 57 HGQRFGLMETFSGFMRHQMGNRSHRHDIRAQPDSIPEQGAGFAPLLIFGGQIPFRLSGHG 116
+ + H + + + A + +
Sbjct: 89 THRSIIRRRRSNRRTSFNPVIVLHGGGGGGAGERVENEEGDGATRERRAYEFYYDDGSGS 148
Query: 117 GIEALFNGAPGIGMTRGNTGDYFIGPGLEEMFEQLSINN-------QQGPPPASRSSIDA 169
G+ L + I M G E + EQLS + G PPAS+S+I++
Sbjct: 149 GLRPLPDSVSEILMGSG----------FERLLEQLSQIEASGNGIGRSGNPPASKSAIES 198
Query: 170 LPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQE 229
LP + I H +++++C +C E FE G E R+MPCKH++H DCIVPWL NSCPVCR E
Sbjct: 199 LPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCIVPWLSIRNSCPVCRFE 258
Query: 230 LP 231
LP
Sbjct: 259 LP 260
>AT5G01980.1 | Symbols: | RING/U-box superfamily protein |
chr5:375542-377023 FORWARD LENGTH=493
Length = 493
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 52/115 (45%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 121 LFNGAPGIGMT--RGNTGDYFIGPGLEEMFEQL--SINNQQGPPPASRSSIDALPTIRIV 176
+F G + + N GDY G +E+ EQL S N+++G PPAS S + LP + I
Sbjct: 281 IFTGLEDLDFSPYAANVGDYLDERGFDELLEQLAESDNSRRGAPPASVSCVRNLPRVIIA 340
Query: 177 KRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
+ H+ C ICKE F L +E Q+PC H+YH CIVPWL NSCP+CR ELP
Sbjct: 341 EEHVMKGLVCAICKELFSLRNETTQLPCLHLYHAHCIVPWLSARNSCPLCRYELP 395
>AT1G68180.1 | Symbols: | RING/U-box superfamily protein |
chr1:25554816-25555562 FORWARD LENGTH=248
Length = 248
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 58/86 (67%)
Query: 145 EEMFEQLSINNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPC 204
+E F + + Q GPPPAS+S+I+A+ T+ I L + C ICKE+FE+G E +++ C
Sbjct: 97 DEEFADVMPSVQIGPPPASQSAIEAVRTVIITDEDLVKEKVCAICKEEFEVGEEGKELKC 156
Query: 205 KHMYHPDCIVPWLVRHNSCPVCRQEL 230
H+YH CIV WL HN+CP+CR E+
Sbjct: 157 LHLYHSSCIVSWLNIHNTCPICRFEV 182
>AT5G15820.1 | Symbols: | RING/U-box superfamily protein |
chr5:5161787-5162833 FORWARD LENGTH=348
Length = 348
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 157 QGPPPASRSSIDALPTIRIVKRHLRSDS-HCPICKEKFELGSEARQMPCKHMYHPDCIVP 215
+G PPAS+S +D LP + + L S S C ICK++ + +++PCKH YH +CI+P
Sbjct: 261 KGTPPASKSVVDGLPDVELTIEELSSVSIVCAICKDEVVFKEKVKRLPCKHYYHGECIIP 320
Query: 216 WLVRHNSCPVCRQELPPQVL 235
WL N+CPVCR ELP L
Sbjct: 321 WLGIRNTCPVCRHELPTDDL 340
>AT5G20910.1 | Symbols: AIP2 | RING/U-box superfamily protein |
chr5:7092663-7094310 REVERSE LENGTH=310
Length = 310
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 160 PPASRSSIDALPTIRIVKRHLR---SDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPW 216
PPAS+ ++ LP I + L+ +++ C ICKE +G + +++PCKH +HP C+ PW
Sbjct: 201 PPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPW 260
Query: 217 LVRHNSCPVCRQELP 231
L HNSCP+CR ELP
Sbjct: 261 LDEHNSCPICRHELP 275
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 86 AQPDSIPEQGAGFAPLLIFGGQIP---FRLSGHGGIEALFNGAPGIGMTRGNTGDYFIGP 142
AQ D E +P++ G + SG+ G E L N I N Y G
Sbjct: 197 AQIDMNDESLISASPIISLEGLVTRERAEGSGNLGWEVLLNHTLEINFDVDNRELYIGGD 256
Query: 143 ------GLEEMFEQLSINNQQ--GPPPASRSSIDALPTIRIVKRHLRSDSH-CPICKEKF 193
+ +FEQ + G PP S+S ++ LP + + + C +CK++
Sbjct: 257 HDDYVQDYDMLFEQFADAEVSVIGLPPTSKSFLNNLPVVLLEGENDDDGGLVCAVCKDEM 316
Query: 194 ELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
+G++A Q+PC H YH +CIVPWL N+CPVCR ELP
Sbjct: 317 NIGNKAVQLPCNHKYHSECIVPWLKVRNTCPVCRYELPTD 356
>AT3G60080.1 | Symbols: | RING/U-box superfamily protein |
chr3:22187635-22188555 FORWARD LENGTH=306
Length = 306
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 47/73 (64%), Gaps = 8/73 (10%)
Query: 167 IDALPTIRIVKRHLRSDSH--------CPICKEKFELGSEARQMPCKHMYHPDCIVPWLV 218
ID++PTI+I L S C +CKE F +G AR++PC H+YH DCIVPWL
Sbjct: 142 IDSIPTIQISSSLLCSTDDSDPDSVLLCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLS 201
Query: 219 RHNSCPVCRQELP 231
HNSCP+CR ELP
Sbjct: 202 DHNSCPLCRFELP 214
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 135 TGDYFIGPGLEEMFEQLSINNQQGPPPASRSSIDALPTIRIVKRHL-RSDSHCPICKEKF 193
+G Y L +MF+ + +G PPA++S I LP + + L + ++ C +CK++
Sbjct: 285 SGHYDADAILGQMFDDET--GIRGNPPAAKSVIQDLPVVELAVEELDKGNNVCAVCKDEM 342
Query: 194 ELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQVL 235
+ + R++PC H YH +CI+PWL N+CPVCR ELP L
Sbjct: 343 LVEEKVRRLPCSHFYHGECIIPWLGIRNTCPVCRYELPTDDL 384
>AT5G60820.1 | Symbols: | RING/U-box superfamily protein |
chr5:24469636-24470895 FORWARD LENGTH=419
Length = 419
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 101 LLIFGGQIPFRLSGHGGIEALFNGAPGIGMTRGNTGDYFIGPGLEEMFEQLSINNQQGPP 160
+L+ + F L L+ G I + DY E +FE I++ G P
Sbjct: 286 VLLNSRSLEFNLDDAESNLELYIG--DIDHEEEDYEDYLHTTEYEMLFEA-EISSGIGKP 342
Query: 161 PASRSSIDALPTIRIVKRHLRSDSH----CPICKEKFELGSEARQMPCKHMYHPDCIVPW 216
PAS+S I L + + + C +CKE+ +G E ++PC+H YH +CIVPW
Sbjct: 343 PASKSFIKNLKVSPLSNEDVMENDDDAVCCAVCKEEMIVGKEVAELPCRHKYHSECIVPW 402
Query: 217 LVRHNSCPVCRQELPPQ 233
L N+CPVCR ELP
Sbjct: 403 LGIRNTCPVCRFELPSD 419
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 143 GLEEMFEQLSINNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQM 202
G+ + L + ++G PPAS++SIDA+P + I + C IC E+++ ++M
Sbjct: 74 GMNPLLRSLLESREEGRPPASKASIDAMPIVEIDG----CEGECVICLEEWKSEETVKEM 129
Query: 203 PCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
PCKH +H CI WL H SCPVCR E+P
Sbjct: 130 PCKHRFHGGCIEKWLGFHGSCPVCRYEMP 158
>AT2G44330.1 | Symbols: | RING/U-box superfamily protein |
chr2:18310621-18311163 FORWARD LENGTH=180
Length = 180
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 6/71 (8%)
Query: 167 IDALPTIRIVKRHLRSDSH------CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRH 220
+++LPTI+I L S S C IC+E F +G AR++PC H+YH DCI+PWL H
Sbjct: 71 MESLPTIKISSSMLSSASSDDSALPCAICREDFVVGESARRLPCNHLYHNDCIIPWLTSH 130
Query: 221 NSCPVCRQELP 231
NSCP+CR ELP
Sbjct: 131 NSCPLCRVELP 141
>AT5G64920.1 | Symbols: CIP8 | COP1-interacting protein 8 |
chr5:25944338-25945342 REVERSE LENGTH=334
Length = 334
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 7/105 (6%)
Query: 133 GNTGDYFI-GPGLEEMFEQLS------INNQQGPPPASRSSIDALPTIRIVKRHLRSDSH 185
GN DY G E + + L+ ++G PPA++S+I+AL T +
Sbjct: 197 GNPADYIDDAAGYEALLQNLAEGDGGGGGGRRGAPPAAKSAIEALETFEVSSSEGEMVMV 256
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQEL 230
C +CK+ +G +++PC H YH DCIVPWL NSCPVCR +L
Sbjct: 257 CAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQL 301
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 143 GLEEMFEQLSINNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQM 202
GL++ F S +QG PA +S ++ +P + I + + C IC +++ G A +M
Sbjct: 69 GLDDFF---SDGGKQGRSPALKSEVENMPRVVIGEDKEKYGGSCAICLDEWSKGDVAAEM 125
Query: 203 PCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
PCKH +H C+ WL RH +CP+CR E+P
Sbjct: 126 PCKHKFHSKCVEEWLGRHATCPMCRYEMP 154
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Query: 143 GLEEMFEQLS-INNQQGPPPASRSSIDALPTIRIV-KRHLRSDSH---CPICKEKFELGS 197
++ FE+LS I + G + +D +P I+I K +L + + C +C + F+LG
Sbjct: 143 AVDSTFEELSSIFDTGGSKGLTGDLVDKIPKIKITGKNNLDASGNKDSCSVCLQDFQLGE 202
Query: 198 EARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
R +P C HM+H CI WL RH SCP+CR++L
Sbjct: 203 TVRSLPHCHHMFHLPCIDNWLFRHGSCPMCRRDL 236
>AT5G02750.1 | Symbols: | RING/U-box superfamily protein |
chr5:620101-620952 FORWARD LENGTH=283
Length = 283
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
C ICKE+ G + +MPC+H +H CI+PWL + N+CP CR +LP
Sbjct: 214 CVICKEEMSEGRDVCEMPCQHFFHWKCILPWLSKKNTCPFCRFQLP 259
>AT1G18780.1 | Symbols: | RING/U-box superfamily protein |
chr1:6476258-6477235 REVERSE LENGTH=325
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 144 LEEMFEQLSIN--NQQGPPPASRSSIDAL--PTIRIVKRHLRSDSHCPICKEKFELGSEA 199
+EE+F Q+S N N PAS+ ++ AL T + + + C IC E+F+ G
Sbjct: 232 IEEVF-QVSFNETNTVRLKPASKLTVGALNRKTYKKASGVVCENDVCTICLEEFDDGRSI 290
Query: 200 RQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
+PC H + +C++ W VR + CP+CR ELP
Sbjct: 291 VTLPCGHEFDEECVLEWFVRSHVCPLCRLELP 322
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 173 IRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
+ + K+ + DS C IC ++ G + +PCKH+YH DCI WL ++ C +C+ E+ P
Sbjct: 221 LHMKKKFVADDSQCSICLMEYAKGDKITTLPCKHIYHKDCISQWLKQNKVCCICKAEVYP 280
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 149 EQLSINNQQGPPPASRSSIDALPTIRIVKRHLRSDSH----CPICKEKFELGSEARQMP- 203
+ S+ + G + ++ +P + I + S C +C + F+LG R +P
Sbjct: 155 DHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDFQLGETVRSLPH 214
Query: 204 CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
C HM+H CI WL+RH SCP+CR+++
Sbjct: 215 CHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 163 SRSSIDALPTIRI----VKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLV 218
S+ I+ LPT + + R+ C IC+ K+++G +PCKH+YH +CI WL
Sbjct: 170 SQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLS 229
Query: 219 RHNSCPVCRQEL 230
+ CPVC E+
Sbjct: 230 INKVCPVCNSEV 241
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 163 SRSSIDALPTIRI----VKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLV 218
S+ I+ LPT + + R+ C IC+ K+++G +PCKH+YH +CI WL
Sbjct: 170 SQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLPCKHVYHSECISKWLS 229
Query: 219 RHNSCPVCRQEL 230
+ CPVC E+
Sbjct: 230 INKVCPVCNSEV 241
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
D C +C E FE PCKHM+H +CIVPWL CPVCR
Sbjct: 169 DKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCR 213
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
D C +C E FE PCKHM+H +CIVPWL CPVCR
Sbjct: 141 DKRCSVCLEDFEPKETVMLTPCKHMFHEECIVPWLKTKGQCPVCR 185
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 148 FEQLSINNQQGPPPASRSS--IDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-C 204
F+ LS + PP S I +LPT + ++ + + C +C E AR +P C
Sbjct: 60 FQDLSFSVVSQPPKRGLDSLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKDNARMLPNC 119
Query: 205 KHMYHPDCIVPWLVRHNSCPVCRQELPP 232
KH++H C+ WL ++CPVCR E P
Sbjct: 120 KHVFHVSCVDTWLTTQSTCPVCRTEAEP 147
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 181 RSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELP 231
R +HC IC + + G R +P C H +H C+ WL+RH SCP+CRQ +
Sbjct: 171 RQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICRQAVK 222
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 166 SIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCP 224
S++ +P +RI S C +C + F++G R +P C HM+H CI WL RH SCP
Sbjct: 181 SLNRIPKVRITDTSPEIVS-CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCP 239
Query: 225 VCRQEL 230
+CR+ L
Sbjct: 240 LCRRHL 245
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 166 SIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCP 224
S++ +P +RI S C +C + F++G R +P C HM+H CI WL RH SCP
Sbjct: 157 SLNRIPKVRITDTSPEIVS-CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCP 215
Query: 225 VCRQEL 230
+CR+ L
Sbjct: 216 LCRRHL 221
>AT1G18760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:6471150-6471824 REVERSE LENGTH=224
Length = 224
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 161 PASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRH 220
PA++ +++L +I K+ S C IC E+F G++ +PC H + +C++ W +
Sbjct: 151 PANKLVVNSLAR-KIYKKTTSSTERCTICLEEFNDGTKVMTLPCGHEFDDECVLTWFETN 209
Query: 221 NSCPVCRQELP 231
+ CP+CR +LP
Sbjct: 210 HDCPLCRFKLP 220
>AT1G73760.1 | Symbols: | RING/U-box superfamily protein |
chr1:27739366-27741161 REVERSE LENGTH=367
Length = 367
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 182 SDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
+D C IC++++E E ++ C H +H DC+ WLVR NSCPVC+
Sbjct: 315 ADRKCIICQDEYEAKDEVGELRCGHRFHIDCVNQWLVRKNSCPVCK 360
>AT1G04790.1 | Symbols: | RING/U-box superfamily protein |
chr1:1345469-1348143 FORWARD LENGTH=634
Length = 634
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 95 GAGFAPLLIFGGQIPFRLSGHGGIEALFNGAPGIGMTRGN---TGDYFIGPGLEEMFEQL 151
A L F I L I A G +T N F E +
Sbjct: 499 SASLRTALNFSFPIDMGLDSRMDILEELENAIGHSITSSNLLHMDRDFTEDDYELLLALD 558
Query: 152 SINNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPD 211
N++ G A+R I+ LP + + + C IC E ++G R +PC H +H D
Sbjct: 559 ENNHRHGGASANR--INNLPESTVQTDNFQET--CVICLETPKIGDTIRHLPCLHKFHKD 614
Query: 212 CIVPWLVRHNSCPVCRQEL 230
CI PWL R SCPVC+ +
Sbjct: 615 CIDPWLGRSKSCPVCKSSV 633
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 161 PASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRH 220
PA+ ++ LP + +V++ C IC E++ ++PCKH YH +C+ WL H
Sbjct: 461 PATIRAVAMLPRVAMVEK-----GECVICFEEWSKSDMETELPCKHKYHLECVEKWLKIH 515
Query: 221 NSCPVCRQEL 230
SCP CR +L
Sbjct: 516 TSCPQCRYKL 525
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 183 DSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
DS C +C +FEL E +MP CKH++H DCI WL HN+CP+CR +
Sbjct: 102 DSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSV 150
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 160 PPASRSSI-DALPTIRIVKRHLRSDS----HCPICKEKFELGSEARQMP-CKHMYHPDCI 213
P RSS+ D+LP + RS S C +C KFE + R +P C H +H DCI
Sbjct: 86 PETERSSVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCI 145
Query: 214 VPWLVRHNSCPVCRQEL 230
WLV + +CP+CR L
Sbjct: 146 DIWLVSNQTCPLCRSPL 162
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 168 DALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVC 226
+ LP + + + DS C +C ++ + +QMP C H +H +CI WL H +CP+C
Sbjct: 93 EMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLC 152
Query: 227 RQELPPQ 233
R L P+
Sbjct: 153 RLSLIPK 159
>AT4G23450.3 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12242190 REVERSE LENGTH=208
Length = 208
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 22/146 (15%)
Query: 85 RAQPDSIPEQGAGFAPLLIFGGQIPFRLSGHGGIEALFNGAPGIGMTRGNTGDYFIGPGL 144
RA P S+ A +PL IP ++ L P + T+GN+ + PGL
Sbjct: 80 RATPSSL--SNAYSSPL---SPPIPLAITNIN----LQTSPPKLPRTQGNSSEA--SPGL 128
Query: 145 EEMFEQLSINNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPC 204
++ P +D L + K++ + CPIC E++E+ + C
Sbjct: 129 TQVV-----------PEKKTWHVDDLTDFELKKQYREAIDECPICLEEYEIDNPKLLTKC 177
Query: 205 KHMYHPDCIVPWLVRHNSCPVCRQEL 230
H +H CI+ W+ R +CPVC +EL
Sbjct: 178 GHDFHLACILAWMERSEACPVCDKEL 203
>AT4G23450.2 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12242190 REVERSE LENGTH=208
Length = 208
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 22/146 (15%)
Query: 85 RAQPDSIPEQGAGFAPLLIFGGQIPFRLSGHGGIEALFNGAPGIGMTRGNTGDYFIGPGL 144
RA P S+ A +PL IP ++ L P + T+GN+ + PGL
Sbjct: 80 RATPSSL--SNAYSSPL---SPPIPLAITNIN----LQTSPPKLPRTQGNSSEA--SPGL 128
Query: 145 EEMFEQLSINNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPC 204
++ P +D L + K++ + CPIC E++E+ + C
Sbjct: 129 TQVV-----------PEKKTWHVDDLTDFELKKQYREAIDECPICLEEYEIDNPKLLTKC 177
Query: 205 KHMYHPDCIVPWLVRHNSCPVCRQEL 230
H +H CI+ W+ R +CPVC +EL
Sbjct: 178 GHDFHLACILAWMERSEACPVCDKEL 203
>AT4G23450.1 | Symbols: AIRP1, AtAIRP1 | RING/U-box superfamily
protein | chr4:12241113-12241837 REVERSE LENGTH=153
Length = 153
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 22/146 (15%)
Query: 85 RAQPDSIPEQGAGFAPLLIFGGQIPFRLSGHGGIEALFNGAPGIGMTRGNTGDYFIGPGL 144
RA P S+ A +PL IP ++ L P + T+GN+ + PGL
Sbjct: 25 RATPSSL--SNAYSSPL---SPPIPLAITNIN----LQTSPPKLPRTQGNSSEA--SPGL 73
Query: 145 EEMFEQLSINNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPC 204
++ P +D L + K++ + CPIC E++E+ + C
Sbjct: 74 TQVV-----------PEKKTWHVDDLTDFELKKQYREAIDECPICLEEYEIDNPKLLTKC 122
Query: 205 KHMYHPDCIVPWLVRHNSCPVCRQEL 230
H +H CI+ W+ R +CPVC +EL
Sbjct: 123 GHDFHLACILAWMERSEACPVCDKEL 148
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 182 SDSHCPICKEKFELGSEARQM-PCKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
S +C IC E G + R++ C H +H DCI PWL++ ++CP+CR E+PP
Sbjct: 66 SSPYCTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPP 117
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 169 ALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCR 227
+ T+RI K L C +C +FE R +P C H++HP CI WL H +CP+CR
Sbjct: 131 TVKTLRIGKEAL----ECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCR 186
Query: 228 QELPP 232
+L P
Sbjct: 187 ADLIP 191
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 181 RSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQE 229
R+D+ CPIC ++ + +P C+H +H +CI PWL HNSCPVCR
Sbjct: 259 RNDTLCPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRNS 308
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 181 RSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPPQV 234
+ + C IC +FE R +P C H++HP CI WL H +CPVCR L QV
Sbjct: 123 KGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANLAEQV 177
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 168 DALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVC 226
+ LP + + DS C +C ++ + +Q+P CKH +H DCI WL H +CP+C
Sbjct: 82 EMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHTTCPLC 141
Query: 227 RQELPP 232
R L P
Sbjct: 142 RLALIP 147
>AT2G29840.1 | Symbols: | RING/U-box superfamily protein |
chr2:12732387-12733983 REVERSE LENGTH=293
Length = 293
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 10/145 (6%)
Query: 91 IPEQGAGFAPLLIFGGQIPFRLSGHGGIEALFNGAPGIGMTRGNTGDYFIGPGLEEMFEQ 150
+P G P + +G P++ E LF+ P + + P E++ Q
Sbjct: 151 LPYLGYEQDPNVFYGQSSPYQPQ-----EVLFHWLPRYEHDFDHQTEEAFHPQFEQVL-Q 204
Query: 151 LSIN--NQQGPPPASRSSIDAL--PTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKH 206
S N N PAS+ ++++L T + + + C IC E+F+ G +PC H
Sbjct: 205 ASFNETNTARLKPASKLAVESLNRKTYKKASDVVGENEMCSICLEEFDDGRSIVALPCGH 264
Query: 207 MYHPDCIVPWLVRHNSCPVCRQELP 231
+ +C + W ++ CP+CR +LP
Sbjct: 265 EFDDECALKWFETNHDCPLCRFKLP 289
>AT5G10650.2 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
D C IC+E++ G E +PC+HMYH C+ WL N CP+C+
Sbjct: 472 DIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G10650.1 | Symbols: | RING/U-box superfamily protein |
chr5:3365237-3367263 REVERSE LENGTH=525
Length = 525
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
D C IC+E++ G E +PC+HMYH C+ WL N CP+C+
Sbjct: 472 DIKCSICQEEYVDGDELGTIPCQHMYHVSCVQQWLRMKNWCPICK 516
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 164 RSSIDALPTIRIVKRHLRSDS-HCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHN 221
RS I++LP R D C +C +FE R +P CKH +H +C+ WL H+
Sbjct: 69 RSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHS 128
Query: 222 SCPVCRQELPPQ 233
+CP+CR + P+
Sbjct: 129 TCPLCRYRVDPE 140
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 8/95 (8%)
Query: 144 LEEMFEQ-LSINNQQ------GPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELG 196
L+E+ +Q + +++QQ G PA +D LP K S C IC ++E
Sbjct: 441 LDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLYTKSQSEDPSQCYICLVEYEEA 500
Query: 197 SEARQMPCKHMYHPDCIVPWLVR-HNSCPVCRQEL 230
R +PC H +H C+ WL H CP+CR ++
Sbjct: 501 DSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDI 535
>AT1G21960.1 | Symbols: | RING/U-box superfamily protein |
chr1:7725972-7726586 FORWARD LENGTH=204
Length = 204
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 152 SINNQQGPPPASRSSIDALPTIRIVKRHLRSDSH---CPICKEKFELGSEARQMPCKHMY 208
+ NN + PA++ +D L ++ + +S+S C IC E+FE G +PC H +
Sbjct: 122 TTNNIELIRPANKLVVDRLAR-KVYNKKKKSNSDASVCTICLEEFEKGEIVVTLPCGHEF 180
Query: 209 HPDCIVPWLVRHNSCPVCRQELP 231
CI W ++ + CP+CR ELP
Sbjct: 181 DDGCIGKWFLKDHVCPLCRFELP 203
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 168 DALPTIRIVKRHL--RSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPV 225
+ LP + + R C IC+E+ ++PC+H YH +CI WL N+CP+
Sbjct: 77 EELPVVEFTAEEMMERGLVVCAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPL 136
Query: 226 CRQ--ELP 231
CR ELP
Sbjct: 137 CRHNVELP 144
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 163 SRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHN 221
S+SSI +P H ++ S C IC + +E G R++ C H +H +CI WL+R
Sbjct: 149 SKSSIQNIPMFYNRSEH-QTKSSCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLLRQE 207
Query: 222 SCPVCRQELP 231
+CP+CR L
Sbjct: 208 TCPICRDHLS 217
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 9/105 (8%)
Query: 131 TRGNTGDYFIG-PGLEEMFEQLSINNQQGPPPASRSSIDALPTIR---IVKRHLRSDSHC 186
+R + DYF L+ +QL + G +S ID LP IV + S C
Sbjct: 71 SRESREDYFDNVTALQGQLQQLFNLHDSG---VDQSLIDTLPVFHYKSIVGLKI-SPFDC 126
Query: 187 PICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
P+C +FE + R +P C H +H +CI WL+ H++CP+CR L
Sbjct: 127 PVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLCRSNL 171
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 162 ASRSSIDALPTIRIVKRHLRSDS-------HCPICKEKFELGSEARQMPCKHMYHPDCIV 214
AS I +LP+ + SDS C IC K++ E R++PC H +H C+
Sbjct: 258 ASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVD 317
Query: 215 PWLVRHNSCPVCRQELP 231
WL + CP+C+Q+LP
Sbjct: 318 QWLRIISCCPLCKQDLP 334
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 162 ASRSSIDALPTIRIVKRHLRSDS-------HCPICKEKFELGSEARQMPCKHMYHPDCIV 214
AS I +LP+ + SDS C IC K++ E R++PC H +H C+
Sbjct: 258 ASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFHLKCVD 317
Query: 215 PWLVRHNSCPVCRQELP 231
WL + CP+C+Q+LP
Sbjct: 318 QWLRIISCCPLCKQDLP 334
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 169 ALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCR 227
+ T+RI K L CP+C +FE R +P C H++HP CI WL +CP+CR
Sbjct: 105 TVKTLRIGKEAL----ECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAWLRSQTTCPLCR 160
Query: 228 QELPP 232
L P
Sbjct: 161 ANLVP 165
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 168 DALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVC 226
+ LP + + +D+ C +C ++ + +QMP C H +H +CI WL H +CP+C
Sbjct: 79 EMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLC 138
Query: 227 RQELPPQ 233
R L P+
Sbjct: 139 RLSLIPK 145
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 182 SDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
S + C +C + +AR++P CKH++H DC+ WL ++CPVCR E+ P+
Sbjct: 104 SATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEPR 156
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
D C IC K++ E R++PC H +H C+ WL + CP+C+Q+LP
Sbjct: 294 DPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELP 231
D C IC K++ E R++PC H +H C+ WL + CP+C+Q+LP
Sbjct: 294 DPECCICLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLP 342
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQEL 230
D+ C IC K+ E R++PC H +H +C+ WL + SCP+C+ E+
Sbjct: 360 DAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCKSEV 407
>AT2G15580.1 | Symbols: | RING/U-box superfamily protein |
chr2:6797687-6798815 FORWARD LENGTH=196
Length = 196
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 177 KRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQEL 230
KR +R C IC ++F+ G +PC H +H C++PWL + CP CR ++
Sbjct: 141 KRRVREQQDCAICLDRFKKGETLVHLPCAHKFHSICLLPWLDTNVYCPYCRTDI 194
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 162 ASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHN 221
S S+ L + K+ + C +C E+ +G R +PC H +H CI PWL +
Sbjct: 187 TSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLPCLHQFHAGCIDPWLRQQG 246
Query: 222 SCPVCR 227
+CPVC+
Sbjct: 247 TCPVCK 252
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 179 HLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRH-NSCPVCRQELPPQVL 235
H ++ C IC E + G R +PC+H +H +CI WL + SCPVC+ ++ + +
Sbjct: 225 HHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTETM 282
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 180 LRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
L+ D+ C IC +E G+E R++PC H +H C+ WL + +CP+C+
Sbjct: 347 LQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 394
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 164 RSSIDALPTIR----IVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLV 218
+S IDALP + I RH SD C +C +F E R +P C H +H +CI WL+
Sbjct: 98 QSFIDALPLLHYKTMIGLRHDLSD--CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLL 155
Query: 219 RHNSCPVCRQ 228
+++CP+CR
Sbjct: 156 TNSTCPLCRD 165
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 180 LRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQEL 230
L D+ C IC +E G+E +PC H +H CIV WL +CP+C+ +
Sbjct: 301 LAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>AT5G24870.2 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
D C IC+E++ G E +PC+H YH C WL N CP+C+ Q
Sbjct: 465 DVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTSAESQ 515
>AT5G24870.1 | Symbols: | RING/U-box superfamily protein |
chr5:8545008-8546923 REVERSE LENGTH=520
Length = 520
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
D C IC+E++ G E +PC+H YH C WL N CP+C+ Q
Sbjct: 465 DVKCSICQEEYVDGDEVGTLPCQHKYHVSCAQQWLRMKNWCPICKTSAESQ 515
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 179 HLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRH-NSCPVCRQELPPQVL 235
H ++ C IC E + G R +PC+H +H +CI WL + SCPVC+ ++ + +
Sbjct: 225 HHKAGETCAICLEDYRFGESLRLLPCQHAFHLNCIDSWLTKWGTSCPVCKHDIRTETM 282
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 166 SIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCP 224
++ +LP R K + + C IC FE G + +P C H++H DC+ WL + +CP
Sbjct: 120 AVRSLPVYRYTKAAKQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCP 179
Query: 225 VCR 227
+CR
Sbjct: 180 LCR 182
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 183 DSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
D C IC + E R +P C H++H DCI WL H +CPVCR L +
Sbjct: 121 DLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAK 172
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 180 LRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
L+ D+ C IC +E G+E R++PC H +H C+ WL + +CP+C+
Sbjct: 276 LQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 323
>AT4G31450.1 | Symbols: | RING/U-box superfamily protein |
chr4:15255955-15257977 REVERSE LENGTH=497
Length = 497
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 181 RSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
+ D+ C IC+E++ +G E ++ C+H YH C+ WL + CP+C+
Sbjct: 443 KEDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICK 489
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 182 SDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
S +C IC E G + R++ C H +H DCI PWL + + CP+CR E+PP
Sbjct: 66 SSPYCTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPP 117
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 144 LEEMFEQ-LSINNQQ------GPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELG 196
L+E+ +Q + +++QQ G PA +D LP K S C IC ++E
Sbjct: 441 LDEIHQQSVVLSSQQPSVSSIGSVPAPNDVVDLLPIKLYTKSQSEDPSQCYICLVEYEEA 500
Query: 197 SEARQMPCKHMYHPDCIVPWL--VRHNSCPVCRQEL 230
R +PC H +H C+ WL + CP+CR ++
Sbjct: 501 DSIRTLPCHHEFHKTCVDKWLKEIHSRVCPLCRGDI 536
>AT1G17970.1 | Symbols: | RING/U-box superfamily protein |
chr1:6185032-6187202 FORWARD LENGTH=368
Length = 368
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 179 HLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQ 228
H D C IC++++E E ++ C H +H C+ WL R N+CPVC++
Sbjct: 313 HTLVDRKCSICQDEYEREDEVGELNCGHSFHVHCVKQWLSRKNACPVCKK 362
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 180 LRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
L D+ C IC +E G+E +PC H +H CIV WL + +CP+C+
Sbjct: 286 LPEDADCCICLSSYEDGAELVSLPCNHHFHSTCIVKWLKMNATCPLCK 333
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 186 CPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
C IC +FE R MP C H +H CI WL ++CPVCR LPP+
Sbjct: 128 CAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPK 176
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
D+ C IC+E+ + A+++ C H++H C+ WL R N+CP CR + P
Sbjct: 289 DATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVP 335
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQEL 230
D+ C IC ++ + R++PC H++H DC+ WL + +CP+C+ E+
Sbjct: 352 DASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWLKINATCPLCKNEV 399
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 162 ASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHN 221
A + I LP R+ K C IC E+F +G E R +PC H +H +CI WL +
Sbjct: 212 AVEALIQELPKFRL-KAVPDDCGECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNV 270
Query: 222 SCPVCRQELPPQV 234
CP CR + P +
Sbjct: 271 KCPRCRCSVFPDL 283
>AT5G54990.1 | Symbols: | RING/U-box superfamily protein |
chr5:22317505-22318185 FORWARD LENGTH=226
Length = 226
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQE 229
CPIC + G ++PC H++H DCI+ WL ++ SCP+CR +
Sbjct: 174 CPICLTELSSGVSRMKLPCSHVFHRDCIMTWLKKNPSCPICRTK 217
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 185 HCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPPQV 234
C IC +FE R +P C H++HP CI WL H +CPVCR L Q
Sbjct: 123 ECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQT 173
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
D+ C IC+E+ + A+++ C H++H C+ WL R N+CP CR + P
Sbjct: 218 DATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVP 264
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 165 SSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSC 223
S I +LP C +C +F+ R MP CKH +H DCI W H+SC
Sbjct: 55 SIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFHSHSSC 114
Query: 224 PVCRQELPP 232
P+CR + P
Sbjct: 115 PLCRSLIEP 123
>AT1G18770.1 | Symbols: | RING/U-box superfamily protein |
chr1:6473370-6474048 REVERSE LENGTH=106
Length = 106
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 158 GPPPASRSSIDALPTIRIVKRHLRSDSH-CPICKEKFELGSEARQMPCKHMYHPDCIVPW 216
P PAS+ + +L +I K S C IC E+F G +PC H + +C++ W
Sbjct: 31 NPTPASKLVVKSLAR-KIYKMTTSSTGEMCIICLEEFSEGRRVVTLPCGHDFDDECVLKW 89
Query: 217 LVRHNSCPVCRQELPPQ 233
++SCP+CR +LP Q
Sbjct: 90 FETNHSCPLCRFKLPYQ 106
>AT3G13228.1 | Symbols: | RING/U-box superfamily protein |
chr3:4267075-4268052 FORWARD LENGTH=325
Length = 325
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 161 PASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRH 220
PAS+ + +L T +I + + C IC E+F G +PC H + +C V W +
Sbjct: 251 PASKLVVKSL-TRKIYDKINYTGERCTICLEEFNAGGILVALPCGHDFDDECAVKWFETN 309
Query: 221 NSCPVCRQELP 231
+ CP+CR ELP
Sbjct: 310 HFCPLCRYELP 320
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 10/74 (13%)
Query: 163 SRSSIDALPTIRIVKRHLRSDSH------CPICKEKFELGSEARQMPCKHMYHPDCIVPW 216
S +I +LP+ KR+ D+ C IC+ +E + +PCKH YH +CI W
Sbjct: 263 SADTIASLPS----KRYKEGDNQNGTNESCVICRLDYEDDEDLILLPCKHSYHSECINNW 318
Query: 217 LVRHNSCPVCRQEL 230
L + CPVC E+
Sbjct: 319 LKINKVCPVCSAEV 332
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 180 LRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
L D+ C IC +E G E R++PC+H +H C+ WL + +CP+C+
Sbjct: 317 LSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCK 364
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 185 HCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELP 231
C IC + + E R P C+H+YH CI WL H +CP CR++LP
Sbjct: 129 ECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCRKDLP 176
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
D+ C IC+E+ + A+++ C H++H C+ WL R N+CP CR + P
Sbjct: 110 DATCIICREEM---TSAKKLVCGHLFHVHCLRSWLERQNTCPTCRALVVP 156
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 164 RSSIDALPTIRI-VKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHN 221
+ +I++LP R + L+ C +C KFE R +P C+H +H CI WL +H
Sbjct: 101 KKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHA 160
Query: 222 SCPVCRQEL 230
+CP+CR +
Sbjct: 161 TCPLCRNRV 169
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 185 HCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
C +C +FE R MP C H++H DC+ WL H++CP+CR +L
Sbjct: 134 ECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRADL 180
>AT4G12190.1 | Symbols: | RING/U-box superfamily protein |
chr4:7278545-7278760 REVERSE LENGTH=71
Length = 71
Score = 51.2 bits (121), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 186 CPICKEKFELGSEAR---QMPCKHMYHPDCIVPWLVRHNSCPVCRQEL 230
C IC E G + R +M C H++H C++ WL R N+CP+CR EL
Sbjct: 22 CSICLESLVSGPKPRDITRMTCSHVFHNGCLLEWLKRKNTCPLCRTEL 69
>AT3G15070.2 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 180 LRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQE 229
L +DS C IC+E ++ + + C H YH +C+ WLV N CP+C+ E
Sbjct: 423 LETDS-CTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471
>AT3G15070.1 | Symbols: | RING/U-box superfamily protein |
chr3:5070472-5072344 REVERSE LENGTH=486
Length = 486
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 180 LRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQE 229
L +DS C IC+E ++ + + C H YH +C+ WLV N CP+C+ E
Sbjct: 423 LETDS-CTICQENYKNEDKIATLDCMHKYHAECLKKWLVIKNVCPICKSE 471
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 164 RSSIDALPTIRI-VKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHN 221
+++I++LP R + + C +C KFE R +P C+H +H CI WL +H
Sbjct: 100 KTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHA 159
Query: 222 SCPVCRQELPPQ 233
+CP+CR + +
Sbjct: 160 TCPLCRDRVSME 171
>AT1G35630.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:13163041-13164484 REVERSE
LENGTH=318
Length = 318
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNS-CPVCRQ 228
C IC + + +G + R +PCKH YH CI WL R S CPVC+Q
Sbjct: 233 CAICIDDYCVGEKLRILPCKHKYHAVCIDSWLGRCRSFCPVCKQ 276
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 183 DSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
D CPIC ++ R +P C+H +H +CI WL H+SCPVCR P
Sbjct: 324 DVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNPSP 374
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 164 RSSIDALPTIRIVKRHLRSDS--HCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHN 221
R ++ A+P++ + + + C IC E + +G + R +PC H +H C+ WL+
Sbjct: 208 RRTVKAMPSVTFTCAKIDNTTGFSCAICLEDYIVGDKLRVLPCSHKFHVACVDSWLISWR 267
Query: 222 S-CPVCRQE 229
+ CPVC+++
Sbjct: 268 TFCPVCKRD 276
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 186 CPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCR 227
C +C +FE + R +P C H +H DCI WL+ H++CP+CR
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCR 176
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 164 RSSIDALPTIRI--VKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRH 220
+++IDALP V L C +C +F + R +P C H +H CI WL+ +
Sbjct: 183 QTAIDALPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSN 242
Query: 221 NSCPVCRQEL 230
++CP+CR+ L
Sbjct: 243 STCPLCRRSL 252
>AT1G74620.1 | Symbols: | RING/U-box superfamily protein |
chr1:28028252-28029001 FORWARD LENGTH=249
Length = 249
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 186 CPICKEKFELGSE-ARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPPQV 234
C IC E + GS ++PC H +H DCI WL ++ CP+CR +P V
Sbjct: 183 CAICMEDYIEGSSIVAKLPCDHEFHGDCINKWLQLNHMCPLCRSSIPKDV 232
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 184 SHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
+ C IC +F G R +P C H +H CI WLV H+SCP CR L
Sbjct: 103 TECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCRHSL 150
>AT1G35625.1 | Symbols: | RING/U-box superfamily protein |
chr1:13158466-13159260 REVERSE LENGTH=201
Length = 201
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNS-CPVCRQ 228
C IC + + +G R +PCKH YH CI WL R S CPVC+Q
Sbjct: 116 CAICIDDYRVGEILRILPCKHKYHAVCIDSWLGRCRSFCPVCKQ 159
>AT3G16090.1 | Symbols: | RING/U-box superfamily protein |
chr3:5456513-5458694 FORWARD LENGTH=492
Length = 492
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 182 SDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
SD+ C IC+E+ + A+++ C H++H C+ WL R +CP CR + P
Sbjct: 288 SDATCIICREEM---TNAKKLICGHLFHVHCLRSWLERQQTCPTCRALVVP 335
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 167 IDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPV 225
I +LP + C +C +FE R +P C+H +H DCI W H++CP+
Sbjct: 100 IKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPL 159
Query: 226 CRQ 228
CR
Sbjct: 160 CRS 162
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 161 PASRSSIDALPT-IRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLV 218
P + ++ +P + VK H C +C +FE E R +P C H++H DCI W
Sbjct: 87 PLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR 146
Query: 219 RHNSCPVCRQELPP 232
+SCP+CR + P
Sbjct: 147 SRSSCPLCRAPVQP 160
>AT4G12210.1 | Symbols: | RING/U-box superfamily protein |
chr4:7281308-7281919 REVERSE LENGTH=203
Length = 203
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 186 CPICKEKFELG---SEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQEL 230
C IC E G S+ +M C H++H C++ W +R N+CP+CR EL
Sbjct: 153 CSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTCPLCRTEL 200
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 185 HCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPPQ 233
C +C +FE R MP C H++H DC+ WL H++CP+CR +L Q
Sbjct: 95 ECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDLCLQ 144
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 184 SHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
+ C IC FE G + R +P C H +H CI WL+ +SCP CRQ L
Sbjct: 112 TECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSL 159
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 184 SHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
+ C IC F G E R +P C H +H +CI WLV +SCP CR+ L P
Sbjct: 100 TECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTP 149
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 184 SHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
+ C IC F G R +P C H +H CI WL+ H+SCP CRQ L
Sbjct: 111 TECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCRQSL 158
>AT3G15740.1 | Symbols: | RING/U-box superfamily protein |
chr3:5333879-5334553 REVERSE LENGTH=224
Length = 224
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 149 EQLSINNQQGPPPASRSSIDALPTIRIVKRHLRSDSHCPICKEKFELGS--EARQMPCKH 206
+ + + Q PA+ +++ +V+ ++ +C IC + +GS EA +MPC H
Sbjct: 143 DHVDVQVQLAVAPANDEAVEMHLETLVVE----NEGYCVICMDNIRVGSDVEAGRMPCSH 198
Query: 207 MYHPDCIVPWLVRHNSCPVCRQELPP 232
++H C WL CPVCR P
Sbjct: 199 VFHRTCGEEWLRNSGICPVCRALFPA 224
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 164 RSSIDALPTIRIVK-RHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHN 221
RS+I+++ + K + + C +C +FE R +P C H +H +CI WL+ H
Sbjct: 112 RSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHK 171
Query: 222 SCPVCR 227
+CP+CR
Sbjct: 172 NCPLCR 177
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 167 IDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPV 225
+ +LP + + + C IC + G +AR +P C H +H +CI W H++CP+
Sbjct: 108 LSSLPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPI 167
Query: 226 CRQEL 230
CR +
Sbjct: 168 CRNTV 172
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 184 SHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCR 227
+ CP+C +FE R +P C H +H CI WL H +CP+CR
Sbjct: 175 TDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 29/102 (28%)
Query: 152 SINNQQGPPPASRSSIDALPTIRIVK-------------------------RHLR-SDSH 185
++ +Q+G AS++ ID +P R K R L D+
Sbjct: 281 AVADQEG---ASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAE 337
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
C IC ++E G E R++PC H +H CI WL ++ CP+C+
Sbjct: 338 CCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLCK 379
>AT2G01150.1 | Symbols: RHA2B | RING-H2 finger protein 2B |
chr2:100703-101146 FORWARD LENGTH=147
Length = 147
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 184 SHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHN-SCPVCRQELPPQ 233
S C +C K + G E R++ C+H++H C+ WL N +CP+CR L P
Sbjct: 72 SDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLLPH 122
>AT4G14220.1 | Symbols: RHF1A | RING-H2 group F1A |
chr4:8196012-8198240 FORWARD LENGTH=371
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 182 SDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQ 228
+D C IC E F L + CKH YH CI+ W R CP+C Q
Sbjct: 42 TDDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQ 88
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 156 QQGPPPASRSSIDALPTIRIVK--RHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDC 212
Q+ S + LP + + + R +S C +C + F G R +P C H++H C
Sbjct: 78 QESSDGLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKC 137
Query: 213 IVPWLVRHNSCPVCRQEL 230
+ WL++ ++CP+CR +
Sbjct: 138 VDTWLLKASTCPICRARV 155
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 184 SHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
+ C IC +F G E R +P C H +H CI WL H+SCP CRQ L
Sbjct: 109 AECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSCRQIL 156
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 183 DSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPPQVL 235
D+ C IC ++E R +P C+H +H DCI WL + +CPVCR P Q+L
Sbjct: 327 DATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCRNS-PEQIL 379
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 183 DSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPPQV 234
+ C +C E E G R +P C H +H C WL H CPVCR EL P +
Sbjct: 101 STECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCRAELAPNL 153
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Query: 163 SRSSIDALPTIRIVKRHLRSDSH--CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRH 220
SR + A+P++ H + + C IC E + +G + R +PC H +H C+ WL
Sbjct: 207 SRRLVKAMPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLPCCHKFHAACVDSWLTSW 266
Query: 221 NS-CPVCRQE 229
+ CPVC+++
Sbjct: 267 RTFCPVCKRD 276
>AT5G07225.1 | Symbols: | RING/U-box superfamily protein |
chr5:2268642-2270227 REVERSE LENGTH=234
Length = 234
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 167 IDALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVC 226
I LPTI+ + D C IC + G + +PC H YH DCI WL C VC
Sbjct: 171 ISQLPTIKF--KPSLEDKMCMICHSDYVRGDKLTILPCTHKYHKDCISHWLQNSKLCCVC 228
Query: 227 RQEL 230
++E+
Sbjct: 229 QREV 232
>AT1G53190.2 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQE 229
C IC+E F+ + + C H YH +C+ WL+ N CP+C+ E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485
>AT1G53190.1 | Symbols: | RING/U-box superfamily protein |
chr1:19838072-19840003 FORWARD LENGTH=494
Length = 494
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQE 229
C IC+E F+ + + C H YH +C+ WL+ N CP+C+ E
Sbjct: 442 CTICQESFKNEEKIATLDCGHEYHAECLEKWLIVKNVCPICKSE 485
>AT4G05350.1 | Symbols: | RING/U-box superfamily protein |
chr4:2726910-2727530 REVERSE LENGTH=206
Length = 206
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 186 CPICKEKFELGSEAR---QMPCKHMYHPDCIVPWLVRHNSCPVCRQEL 230
C IC E G + R +M C H++H C++ WL R N+CP+CR E+
Sbjct: 157 CSICLESLVSGPKPRDVTRMTCSHVFHNGCLLEWLKRKNTCPLCRTEI 204
>AT1G15100.1 | Symbols: RHA2A | RING-H2 finger A2A |
chr1:5193703-5194170 REVERSE LENGTH=155
Length = 155
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 184 SHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHN-SCPVCRQEL 230
S C +C K + G E R++ C+H++H C+ WL + N +CP+CR L
Sbjct: 84 SDCVVCLSKLKEGEEVRKLECRHVFHKKCLEGWLHQFNFTCPLCRSAL 131
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 186 CPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
C +C ++ E G + R++ C+H +H DCI WL + CP+CR ++PP
Sbjct: 62 CAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPP 109
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 11/128 (8%)
Query: 119 EALFNGAPGIGMTRGNTGDYFIGPGLEEMFEQLSINNQQGPPPASRSSIDA--------L 170
+ F +G+ R F GL + E ++ PP + + D+ L
Sbjct: 14 KIFFYLLSFLGLIRKLISTMFKIIGLPDFLEPEPVSTSWPDPPPTLTKPDSAAILAGEML 73
Query: 171 PTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHN--SCPVCR 227
P +R + C +C FE E R++ C+H++H C+ W++ +N +CP+CR
Sbjct: 74 PVVRFSDINRPESECCAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYNQMTCPLCR 133
Query: 228 QELPPQVL 235
+ P L
Sbjct: 134 TQFIPDHL 141
>AT5G41350.1 | Symbols: | RING/U-box superfamily protein |
chr5:16542026-16543092 REVERSE LENGTH=212
Length = 212
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 180 LRSDSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQEL 230
+ + CPIC E++++ + C H +H CI+ W+ R +CPVC +E+
Sbjct: 155 IEEEEDCPICLEEYDIENPKLVAKCDHHFHLACILEWMERSETCPVCNKEM 205
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 186 CPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVR-HNSCPVCRQ 228
CPIC +FE +P C H++H +CI PWL+R H +CP+CR
Sbjct: 62 CPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRS 106
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Query: 150 QLSINNQQGPPPASRSSIDALPTIRIVKRHLRSD-SHCPICKEKFELGSEARQMPCKHMY 208
Q++ + P ++ +I+ L ++S+ C IC E F G +PC H +
Sbjct: 166 QVTYECNKKPQGLTQDAINCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLPCTHSF 225
Query: 209 HPDCIVPWLVRHNSCPVCRQELPPQ 233
H C+ PWL CP CR+ + +
Sbjct: 226 HSSCLNPWLRACGDCPCCRRAIAKE 250
>AT2G15530.3 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQE 229
C IC+E++ G + C H +H DCI W++ N CP+C+ E
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699
>AT2G15530.2 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQE 229
C IC+E++ G + C H +H DCI W++ N CP+C+ E
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699
>AT2G15530.1 | Symbols: | RING/U-box superfamily protein |
chr2:6774150-6777068 FORWARD LENGTH=704
Length = 704
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 186 CPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCRQE 229
C IC+E++ G + C H +H DCI W++ N CP+C+ E
Sbjct: 656 CCICQEEYVEGDNLGTLKCGHEFHKDCIKQWVMIKNLCPICKTE 699
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 186 CPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCR 227
CPIC ++ R MP C H +H CI WL H+SCPVCR
Sbjct: 253 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 183 DSHCPICKEKFELGSEARQMPCKHMYHPDCIVPWLVRHNSCPVCR 227
D+ C IC +E +E R++PC H +H C+ WL + +CP+C+
Sbjct: 322 DAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 165 SSIDALPTIRIVKRHL--------RSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVP 215
S+I A+P + KR + ++ C +C +F+ + R +P C H++H DCI
Sbjct: 105 SAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDI 164
Query: 216 WLVRHNSCPVCRQEL 230
WL + +CP+CR +
Sbjct: 165 WLQGNANCPLCRTSV 179
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 167 IDALPTIRIVK-RHLRSDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCP 224
IDALP + + + C +C +F + R +P C H +H DCI WL+ +++CP
Sbjct: 124 IDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCP 183
Query: 225 VCRQEL 230
+CR L
Sbjct: 184 LCRGTL 189
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 154 NNQQGPPPASRSSI--------DALPTIRIVKRHLRSDSHCPICKEKFELGSEARQMP-C 204
+N+ P +R ++ + +P +R + C +C FE + RQ+P C
Sbjct: 46 HNETSAPDLTRHALSTSASLANELIPVVRFSDLPTDPEDCCTVCLSDFESDDKVRQLPKC 105
Query: 205 KHMYHPDCIVPWLVRHN--SCPVCRQELPPQ 233
H++H C+ W+V +N CPVCR P+
Sbjct: 106 GHVFHHYCLDRWIVDYNKMKCPVCRHRFLPK 136
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 182 SDSHCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQELPP 232
S + C IC +F G E R +P C H +H CI WL +SCP CR+ L P
Sbjct: 109 SSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVP 160
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 185 HCPICKEKFELGSEARQMP-CKHMYHPDCIVPWLVRHNSCPVCRQEL 230
C IC +F G E R +P C H +H CI WL H+SCP CRQ L
Sbjct: 103 ECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQIL 149