Miyakogusa Predicted Gene

Lj0g3v0258219.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0258219.1 Non Chatacterized Hit- tr|I1IQ72|I1IQ72_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,50,0.0000000000001,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; seg,NULL; coiled-coil,NULL,CUFF.16975.1
         (634 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G10180.1 | Symbols:  | P-loop containing nucleoside triphosph...   358   9e-99

>AT3G10180.1 | Symbols:  | P-loop containing nucleoside triphosphate
            hydrolases superfamily protein | chr3:3146393-3154644
            REVERSE LENGTH=1273
          Length = 1273

 Score =  358 bits (918), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 248/636 (38%), Positives = 370/636 (58%), Gaps = 49/636 (7%)

Query: 3    NINDEHFDFVSNVFMGVQEIMSEVQNSKEAVQSVMLIVDDATRSLSALRDMFLDFKTSVA 62
            ++ +E+F+ + NV   ++ + SE Q  K +V+++  ++++  +  +    +  DF   V 
Sbjct: 676  DVINENFNSLVNVATEIEVLESEFQKYKASVETISSVMNEGLQDFAFFSPLIHDFTLFVR 735

Query: 63   QDSAEQNLIWSNYQKLISCLREKVSTIENEKILLDSRLADLQKDLRETELDSKNSQNSLQ 122
            Q S + + + ++YQ + S L++KV  +ENEK+LL  + A LQ  + E   +++  + SL+
Sbjct: 736  QSSEQHDSLINSYQTVQSSLKKKVLDVENEKLLLQEQCAGLQSQIEELNQEAQKHETSLK 795

Query: 123  ERLGQQELENEELISYLQTLEKDISGLTSSSVAKERETLRRDXXXXXXXXXXXXXXXXXX 182
                  E E  +L+S+++ LEKDI  L+SSS+AKE+E LR+D                  
Sbjct: 796  MLSEHHESERSDLLSHIECLEKDIGSLSSSSLAKEKENLRKDFEKTKTKLKDTESKLKNS 855

Query: 183  VQEKTKLEGEKAHAEREIKRLHGQNSLLERDISKRDSLAGRRRDS-IVERSGKMFDPKRQ 241
            +Q+KTKLE EKA AERE+KRLH Q +LLERDISK++S AG+RRDS +VERS         
Sbjct: 856  MQDKTKLEAEKASAERELKRLHSQKALLERDISKQESFAGKRRDSLLVERSAN------- 908

Query: 242  KGVSFSMEQTLQEEHKKLEVFAFESETRITSLEEQVKAALKEKXXXXXXXXXXXXXXXXX 301
                    Q+LQEE K+LEV AFE ET I SLEE++ A   EK                 
Sbjct: 909  --------QSLQEEFKQLEVLAFEMETTIASLEEELAAERGEKEEALCRNDGLGSEITDL 960

Query: 302  XXXXXXSTSELCYLKEEISALKQSLEESVLNQEKLESSIKVLMEEKEELALQLTNSLLET 361
                  S ++L +L+ +++ LK  LE S  +Q++LE+++K L+EEKEELA+ L NSLLE 
Sbjct: 961  TEKLEHSNTKLEHLQNDVTELKTRLEVSSSDQQQLETNVKQLLEEKEELAMHLANSLLEM 1020

Query: 362  EEERAIWSAKEKDVLLAIEEQA-TSNNVQITSLSTELSEVRNELESCREECRNLQGRLTI 420
            EEE+AIWS+KEK +  A+EE+     N+QI SLS E+SE + ELESCR EC  L  RL  
Sbjct: 1021 EEEKAIWSSKEKALTEAVEEKIRLYKNIQIESLSKEMSEEKKELESCRLECVTLADRLRC 1080

Query: 421  S-----YIKEQFSEKSLELDRPPNNLEMADAESKHSQKELHDCPEKEKANEIQREDHLNK 475
            S       KE   EKSLE+DR  + L  ADA SK SQ+ L    +  K+ E+Q    ++ 
Sbjct: 1081 SEENAKQDKESSLEKSLEIDRLGDELRSADAVSKQSQEVLKSDIDILKS-EVQHACKMS- 1138

Query: 476  GDNXXXXXXXXXXXXXXYEFENLKNKLSIVTKERDSLMNQMEDQQKHVMEVEFQPKVQDE 535
                                +  + ++  VT ER  L+ ++E+  K     E     + +
Sbjct: 1139 --------------------DTFQREMDYVTSERQGLLARIEELSK-----ELASSNRWQ 1173

Query: 536  LSRAKVHVEELSREISCMEVKMHVDKVTNNKETSKLRMRLRGTQAKLDAFRCRYKEAIDE 595
            +  AK  +++L+ +IS  E  +H D    NKE +KL+MRLRG QA+LDA   RYK+++ E
Sbjct: 1174 IENAKNPIQDLTLKISSQETNLHKDAAAENKEKAKLKMRLRGMQARLDAISLRYKQSVQE 1233

Query: 596  SVLLNKKYGEAAENLKDQLASKAIEVLNLKKQLAVT 631
            S L+N+K+ EA+  LK++LASKA+EVL+LKKQL+ +
Sbjct: 1234 SELMNRKFKEASAKLKEKLASKALEVLDLKKQLSAS 1269