Miyakogusa Predicted Gene
- Lj0g3v0258189.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0258189.1 Non Chatacterized Hit- tr|I1L787|I1L787_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,81.8,0,TPR-like,NULL;
PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide,CUFF.16970.1
(625 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 709 0.0
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 474 e-134
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 465 e-131
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 456 e-128
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 401 e-111
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 376 e-104
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 375 e-104
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 365 e-101
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 358 5e-99
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 358 6e-99
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 355 5e-98
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 353 2e-97
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 352 4e-97
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 350 1e-96
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 348 5e-96
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 345 8e-95
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 344 1e-94
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 3e-94
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 341 9e-94
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 341 9e-94
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 335 6e-92
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 5e-91
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 2e-90
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 327 2e-89
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 326 4e-89
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 6e-89
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 322 5e-88
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 6e-88
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 8e-88
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 321 9e-88
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 320 1e-87
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 320 1e-87
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 320 2e-87
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 320 2e-87
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 318 6e-87
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 9e-87
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 316 3e-86
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 316 3e-86
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 3e-85
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 4e-85
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 312 4e-85
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 311 1e-84
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 311 1e-84
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 310 1e-84
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 309 3e-84
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 308 6e-84
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 1e-83
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 1e-83
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 4e-83
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 303 2e-82
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 1e-81
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 300 2e-81
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 4e-81
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 5e-81
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 298 6e-81
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 7e-81
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 298 8e-81
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 2e-80
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 295 5e-80
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 295 5e-80
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 4e-79
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 6e-79
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 7e-79
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 291 7e-79
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 8e-79
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 291 1e-78
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 1e-78
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 290 2e-78
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 288 6e-78
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 7e-78
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 1e-77
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 287 2e-77
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 3e-77
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 285 6e-77
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 7e-77
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 8e-77
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 2e-76
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 8e-76
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 281 9e-76
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 281 1e-75
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 281 1e-75
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 280 3e-75
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 279 4e-75
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 7e-75
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 278 8e-75
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 277 1e-74
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 6e-74
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 2e-73
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 8e-73
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 271 1e-72
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 3e-72
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 7e-72
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 266 2e-71
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 4e-71
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 5e-71
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 6e-71
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 264 1e-70
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 2e-70
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 2e-70
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 263 4e-70
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 4e-70
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 262 6e-70
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 7e-70
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 2e-69
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 258 1e-68
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 257 2e-68
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 255 6e-68
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 8e-68
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 2e-67
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 6e-67
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 250 2e-66
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 3e-66
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 247 2e-65
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 245 7e-65
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 1e-64
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 3e-64
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 240 2e-63
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 3e-63
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 3e-63
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 5e-62
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 5e-62
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 3e-61
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 8e-60
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 226 3e-59
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 7e-59
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 8e-58
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 1e-57
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 3e-57
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 6e-57
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 2e-55
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 1e-54
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 3e-54
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 208 9e-54
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 3e-52
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 201 2e-51
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 3e-51
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 3e-51
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 197 3e-50
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 5e-47
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 1e-46
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 1e-46
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 162 5e-40
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 161 1e-39
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 2e-39
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 4e-37
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 151 2e-36
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 2e-36
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 145 7e-35
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 7e-33
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 7e-33
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 139 8e-33
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 1e-32
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 138 1e-32
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 1e-32
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 138 1e-32
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 135 6e-32
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 1e-31
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 133 3e-31
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 3e-31
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 4e-31
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 5e-31
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 9e-31
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 2e-30
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 2e-30
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 127 2e-29
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 4e-29
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 6e-29
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 6e-29
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 1e-28
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 121 1e-27
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 4e-27
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 120 4e-27
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 9e-27
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 119 9e-27
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 118 1e-26
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 118 2e-26
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 8e-26
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 115 1e-25
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 1e-25
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 5e-25
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 9e-25
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 2e-24
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 4e-24
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 8e-24
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 108 9e-24
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 2e-23
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 106 6e-23
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 104 1e-22
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 7e-22
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 100 3e-21
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 6e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 1e-20
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 2e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 4e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 97 4e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 97 5e-20
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 5e-20
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 94 3e-19
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 5e-17
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 8e-17
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 3e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 83 5e-16
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 7e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 81 2e-15
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 81 2e-15
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 81 2e-15
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 79 9e-15
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 9e-15
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 75 2e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 73 5e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 73 6e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 72 8e-13
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 72 1e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 68 2e-11
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 1e-10
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 65 2e-10
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 64 5e-10
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 57 6e-08
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 56 6e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 9e-08
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 55 1e-07
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 55 2e-07
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 55 2e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 54 3e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 709 bits (1831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/559 (59%), Positives = 435/559 (77%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTW 111
I LC+ G+I +ARKLFD +PERD+ W +I GYI G ++EAR+LFD D+ K+VVTW
Sbjct: 53 IGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTW 112
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV 171
TA+V+GY++ Q+ AE LF EMPERNV SWNTMIDGYA++G+ +KAL+LF MPERN+V
Sbjct: 113 TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV 172
Query: 172 SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRN 231
SWN+++KAL + GRI++A F +M RDV SWT MVDGLA NG+VD+AR LFD MP RN
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERN 232
Query: 232 VVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ 291
++SWN MI GYA+N R+DEA +LF+ MPERD SWNT++TGFI+N ++N+A LF MP+
Sbjct: 233 IISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPE 292
Query: 292 KNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ 351
KNVI+WT M+TGYV++ +EEAL +F+K+ D ++KPN GT+V++L ACSDLAGL EGQQ
Sbjct: 293 KNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQ 352
Query: 352 IHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHH 411
IHQLISK+ Q++ V SAL+NMYSK GEL AR++FD GL+ QRDLISWN MIA YAHH
Sbjct: 353 IHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHH 412
Query: 412 GYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH 471
G+GKEAI ++N+M++ GF+ + VTY+ LL ACSHAGLVE+G+++F L+++ S+ +RE+H
Sbjct: 413 GHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEH 472
Query: 472 YACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIE 531
Y CLVDLCGRAGRLK+ N I LS S +G +L+ CNVH I K V KK+L+
Sbjct: 473 YTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG 532
Query: 532 PENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSH 591
++AGTY L+SN+YA+ GK +EAA +RMKMK+KGLKKQPGCSWV+VG +FVVGDKSH
Sbjct: 533 SDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSH 592
Query: 592 SQSELLGYLLLDLHTKMKK 610
Q E L +L DL KM+K
Sbjct: 593 PQFEALDSILSDLRNKMRK 611
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/348 (33%), Positives = 194/348 (55%), Gaps = 20/348 (5%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
NT I Q GRID A +LFD MPER++ W +M+ + G I EA LF+ +DV
Sbjct: 144 NTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERM-PRRDV 202
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER 168
V+WTA+V+G K +++EA RLF MPERN+ SWN MI GYA+N + ++A LF+ MPER
Sbjct: 203 VSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER 262
Query: 169 NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMP 228
+ SWNT+I + A F++M E++V SWTTM+ G N ++A +F +M
Sbjct: 263 DFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKML 322
Query: 229 VRNVVSWNV-----MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTG-----FIQNGD 278
V NV ++ + L E ++ + + + + N +VT + ++G+
Sbjct: 323 RDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQ-LISKSVHQKNEIVTSALLNMYSKSGE 381
Query: 279 LNRAEKLFHE--MPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
L A K+F + Q+++I+W +M+ Y HG +EA++++N+++ H KP+ T++ +
Sbjct: 382 LIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRK-HGFKPSAVTYLNL 440
Query: 337 LGACSDLAGLNEGQQIHQLISKT---AFQESTYVVSALINMYSKCGEL 381
L ACS + +G + + + + +E Y + L+++ + G L
Sbjct: 441 LFACSHAGLVEKGMEFFKDLVRDESLPLREEHY--TCLVDLCGRAGRL 486
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 175/365 (47%), Gaps = 46/365 (12%)
Query: 259 PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFN 318
P P W L+ + G + A KLF +P+++V+TWT ++TGY++ G EA ++F+
Sbjct: 44 PRVPQPEW--LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFD 101
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQE--STYVVS--ALINM 374
++ + + N T+ + ++G +Q+ I++ FQE VVS +I+
Sbjct: 102 RVDS----RKNVVTWTAM------VSGYLRSKQLS--IAEMLFQEMPERNVVSWNTMIDG 149
Query: 375 YSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
Y++ G + A +FDE + +R+++SWN M+ A G EA+NLF +M + + V
Sbjct: 150 YAQSGRIDKALELFDE--MPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVV 203
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEG 494
++ ++ + G V+E + FD + + I + ++ + R+ EA + +
Sbjct: 204 SWTAMVDGLAKNGKVDEARRLFDCMPERNIIS-----WNAMITGYAQNNRIDEADQLFQV 258
Query: 495 LGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPE-NAGTYSLLSNMYASVGKWKE 553
+ + + W ++ G N ++ K A + PE N +++ + Y + +E
Sbjct: 259 MP-ERDFASWNTMITG--FIRNREMNK--ACGLFDRMPEKNVISWTTMITGYVENKENEE 313
Query: 554 AANVRMKMKDKGLKKQPGCSWVEVGNTV----------QVFVVGDKS-HSQSELLGYLLL 602
A NV KM G K ++V + + Q+ + KS H ++E++ LL
Sbjct: 314 ALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALL 373
Query: 603 DLHTK 607
++++K
Sbjct: 374 NMYSK 378
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 474 bits (1220), Expect = e-134, Method: Compositional matrix adjust.
Identities = 238/631 (37%), Positives = 375/631 (59%), Gaps = 68/631 (10%)
Query: 43 SAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG- 101
S +K+ N +IS + GR ++A ++F RMP + MI+GY+ G + ARKLFD
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEM 121
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL 161
P+ +D+V+W ++ GYV+ + +A LF MPER+V SWNTM+ GYA+NG + A +
Sbjct: 122 PE--RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 162 FRRMPERNVVSWNTIIKALSECGRIEDA-------------QWH---------------- 192
F RMPE+N VSWN ++ A + ++E+A W+
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR 239
Query: 193 --FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDE 250
F+ M RDV SW T++ G A +G++D+AR+LFD PV++V +W M+ GY +NR ++E
Sbjct: 240 QFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEE 299
Query: 251 ALELFERMPERD--------------------------MP-----SWNTLVTGFIQNGDL 279
A ELF++MPER+ MP +WNT++TG+ Q G +
Sbjct: 300 ARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKI 359
Query: 280 NRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
+ A+ LF +MP+++ ++W AM+ GY Q G S EAL++F +++ + + N +F + L
Sbjct: 360 SEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALST 418
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
C+D+ L G+Q+H + K ++ +V +AL+ MY KCG + A +F E + +D++
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE--MAGKDIV 476
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
SWN MIA Y+ HG+G+ A+ F M+ G + +D T V +L+ACSH GLV++G QYF +
Sbjct: 477 SWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTM 536
Query: 460 LKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADI 519
++ + HYAC+VDL GRAG L++A N+++ + + ++WG LL VHGN ++
Sbjct: 537 TQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTEL 596
Query: 520 GKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGN 579
+ A KI +EPEN+G Y LLSN+YAS G+W + +R++M+DKG+KK PG SW+E+ N
Sbjct: 597 AETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQN 656
Query: 580 TVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
F VGD+ H + + + L +L +MKK
Sbjct: 657 KTHTFSVGDEFHPEKDEIFAFLEELDLRMKK 687
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/470 (27%), Positives = 229/470 (48%), Gaps = 75/470 (15%)
Query: 136 ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQ 195
+ +++ WN I Y R G+ +AL +F+RMP + VS+N +I G E A+ F++
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDE 120
Query: 196 MRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELF 255
M ERD+ SW M+ G N + ARELF+ MP R+V SWN M+ GYA+N +D+A +F
Sbjct: 121 MPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVF 180
Query: 256 ERMPERDMPSWNTLVTGFIQNGDLN-------------------------------RAEK 284
+RMPE++ SWN L++ ++QN + A +
Sbjct: 181 DRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 285 LFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC---- 340
F M ++V++W ++TGY Q G +EA ++F D + + T+ ++
Sbjct: 241 FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF-----DESPVQDVFTWTAMVSGYIQNR 295
Query: 341 ---------------------SDLAGLNEGQQIHQLISKTAFQ----ESTYVVSALINMY 375
+ LAG +G+++ ++K F + + +I Y
Sbjct: 296 MVEEARELFDKMPERNEVSWNAMLAGYVQGERME--MAKELFDVMPCRNVSTWNTMITGY 353
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
++CG++ A+ +FD+ + +RD +SW MIA Y+ G+ EA+ LF +M+ G + N +
Sbjct: 354 AQCGKISEAKNLFDK--MPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII-EG 494
+ L+ C+ +E G Q +L+K A L+ C + G ++EA ++ E
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYC-KCGSIEEANDLFKEM 470
Query: 495 LGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPENAGTYSLLS 542
G D + W ++AG + HG ++ + + + ++P++A ++LS
Sbjct: 471 AGKD--IVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 232/589 (39%), Positives = 354/589 (60%), Gaps = 37/589 (6%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKD 107
N I+ L + G+I +ARKLFD + + W +M+ GY + ++ARKLFD PD ++
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD--RN 78
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
+++W LV+GY+K +I+EA ++F MPERNV SW ++ GY NG+ + A LF +MPE
Sbjct: 79 IISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE 138
Query: 168 RNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM 227
+N VSW ++ + GRI+DA + + ++D + T+M+ GL GRVD+ARE+FD M
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 228 PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFH 287
R+V++W M+ GY +N R+D+A ++F+ MPE+ SW +++ G++QNG + AE+LF
Sbjct: 199 SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFE 258
Query: 288 EMPQKNVITWTAMMTGYVQHGLSEEALKIFNK---------------------------- 319
MP K VI AM++G Q G +A ++F+
Sbjct: 259 VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDL 318
Query: 320 --LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
L ++P T +++L C+ LA L+ G+Q+H + + F YV S L+ MY K
Sbjct: 319 FILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIK 378
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELG-FQANDVTY 436
CGEL ++ IFD +D+I WN +I+ YA HG G+EA+ +F +M G + N+VT+
Sbjct: 379 CGELVKSKLIFDR--FPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTF 436
Query: 437 VELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLG 496
V L+ACS+AG+VEEGL+ ++ + ++ HYAC+VD+ GRAGR EA +I+ +
Sbjct: 437 VATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMT 496
Query: 497 VDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAAN 556
V+ +VWG LL C H D+ + AKK+++IEPEN+GTY LLSNMYAS G+W + A
Sbjct: 497 VEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAE 556
Query: 557 VRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGD-KSHSQSELLGYLLLDL 604
+R MK + ++K PGCSW EV N V F G SH + E + +L +L
Sbjct: 557 LRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDEL 605
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 49/253 (19%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-------- 99
CN IS L Q+G I AR++FD M ER+ W T+I + G EA LF
Sbjct: 268 CNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGV 327
Query: 100 --DGPDAMK----------------------------DVVTWTALVNGYVKLNQIEEAER 129
P + DV + L+ Y+K ++ +++
Sbjct: 328 RPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKL 387
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP-----ERNVVSWNTIIKALSECG 184
+F P +++ WN++I GYA +G E+AL +F MP + N V++ + A S G
Sbjct: 388 IFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAG 447
Query: 185 RIEDAQWHFNQMR-----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVM 238
+E+ + M + + MVD L GR ++A E+ D M V + W +
Sbjct: 448 MVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSL 507
Query: 239 IKGYAKNRRLDEA 251
+ + +LD A
Sbjct: 508 LGACRTHSQLDVA 520
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 117/270 (43%), Gaps = 56/270 (20%)
Query: 264 PSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
P+ N +T + G ++ A KLF K++ +W +M+ GY + + +A K+F+++
Sbjct: 18 PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDR 77
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+ + N L++ Y K GE+
Sbjct: 78 NIISWN----------------------------------------GLVSGYMKNGEIDE 97
Query: 384 ARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
AR++FD L+ +R+++SW ++ Y H+G A +LF KM E N V++ +L
Sbjct: 98 ARKVFD--LMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPE----KNKVSWTVMLIGF 151
Query: 444 SHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSV 503
G +++ + ++ + +I + + LC + GR+ EA I + + + S+
Sbjct: 152 LQDGRIDDACKLYEMIPDKDNIA----RTSMIHGLC-KEGRVDEAREIFDEMS-ERSVIT 205
Query: 504 WGPLLAGCNVHGNADIGKLVAKKILKIEPE 533
W ++ G + D A+KI + PE
Sbjct: 206 WTTMVTGYGQNNRVDD----ARKIFDVMPE 231
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 456 bits (1173), Expect = e-128, Method: Compositional matrix adjust.
Identities = 233/593 (39%), Positives = 347/593 (58%), Gaps = 36/593 (6%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD 100
L S +C+ ISRL + G+I++ARK FD + + + W ++++GY G+ KEAR+LFD
Sbjct: 13 LTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFD 72
Query: 101 GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALD 160
+ ++VV+W LV+GY+K I EA +F MPERNV SW M+ GY + G +A
Sbjct: 73 -EMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAES 131
Query: 161 LFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDA 220
LF RMPERN VSW + L + GRI+ A+ ++ M +DV + T M+ GL GRVD+A
Sbjct: 132 LFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEA 191
Query: 221 RELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLN 280
R +FD M RNVV+W MI GY +N R+D A +LFE MPE+ SW +++ G+ +G +
Sbjct: 192 RLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIE 251
Query: 281 RAEKLFHEMPQKNVI-------------------------------TWTAMMTGYVQHGL 309
AE+ F MP K VI TW M+ Y + G
Sbjct: 252 DAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGF 311
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS 369
EAL +F ++Q ++P+ + +++L C+ LA L G+Q+H + + F + YV S
Sbjct: 312 ELEALDLFAQMQ-KQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVAS 370
Query: 370 ALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGF 429
L+ MY KCGEL A+ +FD +D+I WN +I+ YA HG G+EA+ +F++M G
Sbjct: 371 VLMTMYVKCGELVKAKLVFDR--FSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGT 428
Query: 430 QANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAF 489
N VT + +LTACS+AG +EEGL+ F+ + + +HY+C VD+ GRAG++ +A
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAM 488
Query: 490 NIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVG 549
+IE + + +VWG LL C H D+ ++ AKK+ + EP+NAGTY LLS++ AS
Sbjct: 489 ELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRS 548
Query: 550 KWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGD-KSHSQSELLGYLL 601
KW + A VR M+ + K PGCSW+EVG V +F G K+H + ++ +L
Sbjct: 549 KWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILMML 601
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 401 bits (1030), Expect = e-111, Method: Compositional matrix adjust.
Identities = 215/583 (36%), Positives = 332/583 (56%), Gaps = 59/583 (10%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIK---EARKLFDGPDAM 105
NT IS + ++ ARKLFD MP+RD+ W TMI+GY+ CG I+ EARKLFD +
Sbjct: 75 NTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPS- 133
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
+D +W +++GY K +I EA LF +MPERN SW+ MI G+ +NG+ + A+ LFR+M
Sbjct: 134 RDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKM 193
Query: 166 PERN-------------------------------------VVSWNTIIKALSECGRIED 188
P ++ V ++NT+I + G++E
Sbjct: 194 PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEA 253
Query: 189 AQWHFNQM------------RER---DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVV 233
A+ F+Q+ RER +V SW +M+ G V AR LFD+M R+ +
Sbjct: 254 ARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI 313
Query: 234 SWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKN 293
SWN MI GY R+++A LF MP RD SWN +V+G+ G++ A F + P+K+
Sbjct: 314 SWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKH 373
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
++W +++ Y ++ +EA+ +F ++ + KP+ T ++L A + L L G Q+H
Sbjct: 374 TVSWNSIIAAYEKNKDYKEAVDLFIRMNIE-GEKPDPHTLTSLLSASTGLVNLRLGMQMH 432
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGY 413
Q++ KT + V +ALI MYS+CGE+ +RRIFDE L+ R++I+WN MI YA HG
Sbjct: 433 QIVVKTVIPDVP-VHNALITMYSRCGEIMESRRIFDEMKLK-REVITWNAMIGGYAFHGN 490
Query: 414 GKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA 473
EA+NLF M+ G + +T+V +L AC+HAGLV+E F ++ I+ + +HY+
Sbjct: 491 ASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYS 550
Query: 474 CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPE 533
LV++ G+ +EA II + + +VWG LL C ++ N + + A+ + ++EPE
Sbjct: 551 SLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPE 610
Query: 534 NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVE 576
++ Y LL NMYA +G W EA+ VRM M+ K +KK+ G SWV+
Sbjct: 611 SSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 230/459 (50%), Gaps = 38/459 (8%)
Query: 83 INGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSW 142
+N I G I EAR +F+ +A ++ VTW +++GYVK ++ +A +LF MP+R+V +W
Sbjct: 47 LNQMIRSGYIAEARDIFEKLEA-RNTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTW 105
Query: 143 NTMIDGYARNGQT---EKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER 199
NTMI GY G E+A LF MP R+ SWNT+I ++ RI +A F +M ER
Sbjct: 106 NTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 200 DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP 259
+ SW+ M+ G NG VD A LF +MPV++ ++ G KN RL EA + +
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYG 225
Query: 260 ------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ---------------KNVITWT 298
E + ++NTL+ G+ Q G + A LF ++P KNV++W
Sbjct: 226 SLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
+M+ Y++ G A +F++++ + NT ++ + L S+
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDRDTISWNT--------MIDGYVHVSRMEDAFALFSE 337
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAI 418
+++ + + +++ Y+ G + +AR F++ ++ +SWN +IAAY + KEA+
Sbjct: 338 MPNRDA-HSWNMMVSGYASVGNVELARHYFEK--TPEKHTVSWNSIIAAYEKNKDYKEAV 394
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL 478
+LF +M G + + T LL+A + + G+Q ++K V + L+ +
Sbjct: 395 DLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDV--PVHNALITM 452
Query: 479 CGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNA 517
R G + E+ I + + + + W ++ G HGNA
Sbjct: 453 YSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNA 491
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 222/452 (49%), Gaps = 47/452 (10%)
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER 199
R+ N ++ R+G +A D+F ++ RN V+WNT+I + + A+ F+ M +R
Sbjct: 41 RATNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR 100
Query: 200 DVKSWTTMVDGLAINGRV---DDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFE 256
DV +W TM+ G G + ++AR+LFD MP R+ SWN MI GYAKNRR+ EAL LFE
Sbjct: 101 DVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFE 160
Query: 257 RMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHG-LSEEA-- 313
+MPER+ SW+ ++TGF QNG+++ A LF +MP K+ A++ G +++ LSE A
Sbjct: 161 KMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWV 220
Query: 314 --------------LKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
+ +N L + + + DL G + G + + K
Sbjct: 221 LGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKN 280
Query: 360 AFQESTYVVS--ALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEA 417
VVS ++I Y K G++ AR +FD+ ++ RD ISWN MI Y H ++A
Sbjct: 281 -------VVSWNSMIKAYLKVGDVVSARLLFDQ--MKDRDTISWNTMIDGYVHVSRMEDA 331
Query: 418 INLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD 477
LF++M + ++ +++ + G VE YF+K + ++ + ++
Sbjct: 332 FALFSEMPNRDAHSWNM----MVSGYASVGNVELARHYFEKTPEKHTVS-----WNSIIA 382
Query: 478 LCGRAGRLKEAFNI-----IEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP 532
+ KEA ++ IEG D LL+ N +G + + ++K
Sbjct: 383 AYEKNKDYKEAVDLFIRMNIEGEKPD--PHTLTSLLSASTGLVNLRLGMQMHQIVVKTVI 440
Query: 533 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 564
+ ++ L MY+ G+ E+ + +MK K
Sbjct: 441 PDVPVHNALITMYSRCGEIMESRRIFDEMKLK 472
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/543 (36%), Positives = 315/543 (58%), Gaps = 50/543 (9%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
+D+ L++ Q A R+F ++ E NV N++I +A+N Q +A +F M
Sbjct: 49 EDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEM 108
Query: 166 PERNVV----------------SW-----------------------NTIIKALSECGR- 185
+ SW N +I S CG
Sbjct: 109 QRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGL 168
Query: 186 -IEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAK 244
+ DA F +M ERD SW +M+ GL G + DAR LFD MP R+++SWN M+ GYA+
Sbjct: 169 GVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYAR 228
Query: 245 NRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP--QKNVITWTAMMT 302
R + +A ELFE+MPER+ SW+T+V G+ + GD+ A +F +MP KNV+TWT ++
Sbjct: 229 CREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIA 288
Query: 303 GYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQ 362
GY + GL +EA ++ +++ A LK + +++L AC++ L+ G +IH ++ ++
Sbjct: 289 GYAEKGLLKEADRLVDQMVAS-GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLG 347
Query: 363 ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
+ YV++AL++MY+KCG L A +F++ + ++DL+SWN M+ HG+GKEAI LF+
Sbjct: 348 SNAYVLNALLDMYAKCGNLKKAFDVFND--IPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRA 482
+M+ G + + VT++ +L +C+HAGL++EG+ YF + K + + +HY CLVDL GR
Sbjct: 406 RMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRV 465
Query: 483 GRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLS 542
GRLKEA +++ + ++ ++ +WG LL C +H DI K V ++K++P + G YSLLS
Sbjct: 466 GRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLS 525
Query: 543 NMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQS----ELLG 598
N+YA+ W+ A++R KMK G++K G S VE+ + + F V DKSH +S ++LG
Sbjct: 526 NIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLG 585
Query: 599 YLL 601
L+
Sbjct: 586 SLI 588
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/371 (26%), Positives = 187/371 (50%), Gaps = 28/371 (7%)
Query: 36 TSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA 95
+S + +A+ DC + C + DA KLF++M ERD W +M+ G + G +++A
Sbjct: 149 SSDIYVPNALIDCYSR----CGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDA 204
Query: 96 RKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQT 155
R+LFD +D+++W +++GY + ++ +A LF +MPERN SW+TM+ GY++ G
Sbjct: 205 RRLFD-EMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDM 263
Query: 156 EKALDLFRRM--PERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
E A +F +M P +NVV+W II +E G +++A +QM D + +++
Sbjct: 264 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 210 GLAINGRVDDARELFDRMPVRNVVS----WNVMIKGYAKNRRLDEALELFERMPERDMPS 265
+G + + + N+ S N ++ YAK L +A ++F +P++D+ S
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS 383
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQ 321
WNT++ G +G A +LF M ++ + +T+ A++ GL +E + F ++
Sbjct: 384 WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSME 443
Query: 322 ADHALKPNT---GTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
+ L P G V +LG L ++ +++ + + + AL+
Sbjct: 444 KVYDLVPQVEHYGCLVDLLGRVGRL------KEAIKVVQTMPMEPNVVIWGALLGACRMH 497
Query: 379 GELHIARRIFD 389
E+ IA+ + D
Sbjct: 498 NEVDIAKEVLD 508
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 12/172 (6%)
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNG 403
A LN+ +Q+H I + E ++ LI+ S C + ++A R+F++ +++ ++ N
Sbjct: 30 ANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQ--VQEPNVHLCNS 87
Query: 404 MIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAG---LVEEGLQYFDKLL 460
+I A+A + +A +F++MQ G A++ TY LL ACS +V+ + +KL
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 461 KNRSIQVREDHYACLVDLCGRAGRL--KEAFNIIEGLGVDLSLSVWGPLLAG 510
+ I V L+D R G L ++A + E + ++S W +L G
Sbjct: 148 LSSDIYVPN----ALIDCYSRCGGLGVRDAMKLFEKMSERDTVS-WNSMLGG 194
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/620 (33%), Positives = 338/620 (54%), Gaps = 89/620 (14%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM 134
++ + +I+ Y CG +++ R++FD +++ TW ++V G KL ++EA+ LF M
Sbjct: 54 EIFIQNRLIDAYSKCGSLEDGRQVFDKM-PQRNIYTWNSVVTGLTKLGFLDEADSLFRSM 112
Query: 135 PERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIKALS--------- 181
PER+ +WN+M+ G+A++ + E+AL F M + V S+ +++ A S
Sbjct: 113 PERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGV 172
Query: 182 --------------------------ECGRIEDAQWHFNQMRERDVKSWTTMVDGLAING 215
+CG + DAQ F++M +R+V SW +++ NG
Sbjct: 173 QVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNG 232
Query: 216 RVDDARELFDRM---------------------------------------PVRN-VVSW 235
+A ++F M +RN ++
Sbjct: 233 PAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILS 292
Query: 236 NVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI 295
N + YAK R+ EA +F+ MP R++ + ++++G+ A +F +M ++NV+
Sbjct: 293 NAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVV 352
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
+W A++ GY Q+G +EEAL +F L+ + ++ P +F +L AC+DLA L+ G Q H
Sbjct: 353 SWNALIAGYTQNGENEEALSLFCLLKRE-SVCPTHYSFANILKACADLAELHLGMQAHVH 411
Query: 356 ISKTAF------QESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYA 409
+ K F ++ +V ++LI+MY KCG + +F + + +RD +SWN MI +A
Sbjct: 412 VLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRK--MMERDCVSWNAMIIGFA 469
Query: 410 HHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRE 469
+GYG EA+ LF +M E G + + +T + +L+AC HAG VEEG YF + ++ +
Sbjct: 470 QNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLR 529
Query: 470 DHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK 529
DHY C+VDL GRAG L+EA ++IE + + +WG LLA C VH N +GK VA+K+L+
Sbjct: 530 DHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLE 589
Query: 530 IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDK 589
+EP N+G Y LLSNMYA +GKW++ NVR M+ +G+ KQPGCSW+++ VF+V DK
Sbjct: 590 VEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDK 649
Query: 590 SHSQSELLGYLLLDLHTKMK 609
SH + + + LL L +M+
Sbjct: 650 SHPRKKQIHSLLDILIAEMR 669
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 40/265 (15%)
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGAC--SDLAGLNEGQQIHQLISKTAFQESTYVVSA 370
A K F KL AD + ++ F +L +C S L+ + + +H + K+ F ++ +
Sbjct: 2 ATKSFLKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYV-RYVHASVIKSGFSNEIFIQNR 60
Query: 371 LINMYSKCGELHIARRIFD--------------------------EGLLR---QRDLISW 401
LI+ YSKCG L R++FD + L R +RD +W
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 402 NGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLK 461
N M++ +A H +EA+ F M + GF N+ ++ +L+ACS + +G+Q + K
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 462 NRSIQVREDHY--ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADI 519
+ + D Y + LVD+ + G + +A + + +G D ++ W L+ +G A
Sbjct: 181 SPFLS---DVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVVSWNSLITCFEQNGPAVE 236
Query: 520 GKLVAKKIL--KIEPENAGTYSLLS 542
V + +L ++EP+ S++S
Sbjct: 237 ALDVFQMMLESRVEPDEVTLASVIS 261
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 365 bits (937), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/571 (35%), Positives = 332/571 (58%), Gaps = 15/571 (2%)
Query: 50 TSISRLCQEGRIDDARKLFDRMPE--RDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKD 107
T I+ + GR D+A L+ P RD +++GY+ G EA ++F G A+K+
Sbjct: 149 TMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGM-AVKE 207
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
VV+ +++V+GY K+ +I +A LF M ERNV +W MIDGY + G E LF RM +
Sbjct: 208 VVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQ 267
Query: 168 RNVVSWNT-----IIKALSECGRI-EDAQWHFNQMR---ERDVKSWTTMVDGLAINGRVD 218
V N+ + KA + R E +Q H R E D+ +++ + G +
Sbjct: 268 EGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMG 327
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGD 278
+A+ +F M ++ VSWN +I G + +++ EA ELFE+MP +DM SW ++ GF G+
Sbjct: 328 EAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGE 387
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
+++ +LF MP+K+ ITWTAM++ +V +G EEAL F+K+ PN+ TF +VL
Sbjct: 388 ISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVC-PNSYTFSSVLS 446
Query: 339 ACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDL 398
A + LA L EG QIH + K V ++L++MY KCG + A +IF + + ++
Sbjct: 447 ATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFS--CISEPNI 504
Query: 399 ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDK 458
+S+N MI+ Y+++G+GK+A+ LF+ ++ G + N VT++ LL+AC H G V+ G +YF
Sbjct: 505 VSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKS 564
Query: 459 LLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD 518
+ + +I+ DHYAC+VDL GR+G L +A N+I + VWG LL+ H D
Sbjct: 565 MKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVD 624
Query: 519 IGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVG 578
+ +L AKK++++EP++A Y +LS +Y+ +GK ++ + K K +KK PG SW+ +
Sbjct: 625 LAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILK 684
Query: 579 NTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
V F+ GD+S E +G+ L + +M+
Sbjct: 685 GEVHNFLAGDESQLNLEEIGFTLKMIRKEME 715
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 207/402 (51%), Gaps = 34/402 (8%)
Query: 91 VIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYA 150
+ ++ R + + + ++ + + ++EAE +F +M R++ SW MI YA
Sbjct: 33 ITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYA 92
Query: 151 RNGQTEKALDLFRRMPERNVVSWNTIIKAL--SECGRIEDAQWHFNQMRERDVKSWTTMV 208
NG+ KA +F MP R S+N +I A+ ++C + A F + E++ S+ TM+
Sbjct: 93 ENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCD-LGKAYELFCDIPEKNAVSYATMI 151
Query: 209 DGLAINGRVDDARELFDRMPV--RNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSW 266
G GR D+A L+ PV R+ V+ NV++ GY + + +EA+ +F+ M +++ S
Sbjct: 152 TGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSC 211
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
+++V G+ + G + A LF M ++NVITWTAM+ GY + G E+ +F +++ + +
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
K N+ T + AC D EG QIH L+S+ + ++ ++L++MYSK G + A+
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE----------LGF------- 429
+F G+++ +D +SWN +I EA LF KM GF
Sbjct: 332 VF--GVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 430 ----------QANDVTYVELLTACSHAGLVEEGLQYFDKLLK 461
+ +++T+ +++A G EE L +F K+L+
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQ 431
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 173/350 (49%), Gaps = 48/350 (13%)
Query: 47 DCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DG 101
C++ + C+ GRI DAR LFDRM ER++ W MI+GY G ++ LF +G
Sbjct: 210 SCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEG 269
Query: 102 P------------DAMKDVVTW----------------------TALVNGYVKLNQIEEA 127
A +D V + +L++ Y KL + EA
Sbjct: 270 DVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 128 ERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIE 187
+ +F M ++ SWN++I G + Q +A +LF +MP +++VSW +IK S G I
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 188 DAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVV----SWNVMIKGYA 243
F M E+D +WT M+ NG ++A F +M + V +++ ++ A
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATA 449
Query: 244 KNRRLDEALELFERMPE----RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTA 299
L E L++ R+ + D+ N+LV+ + + G+ N A K+F + + N++++
Sbjct: 450 SLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNT 509
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG 349
M++GY +G ++ALK+F+ L++ +PN TF+ +L AC + ++ G
Sbjct: 510 MISGYSYNGFGKKALKLFSMLESS-GKEPNGVTFLALLSACVHVGYVDLG 558
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF---DGPDAM 105
N+ +S C+ G +DA K+F + E ++ + TMI+GY G K+A KLF +
Sbjct: 477 NSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKE 536
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMP-----ERNVRSWNTMIDGYARNGQTEKALD 160
+ VT+ AL++ V + ++ + F M E + M+D R+G + A +
Sbjct: 537 PNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASN 596
Query: 161 LFRRMPER-NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMV 208
L MP + + W +++ A R++ A+ ++ E + S T V
Sbjct: 597 LISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYV 645
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 358 bits (920), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 173/494 (35%), Positives = 298/494 (60%), Gaps = 5/494 (1%)
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARN-GQTEKALD 160
P + ++ V+ I+ A R+F+ M +N +WN+++ G +++ + +A
Sbjct: 55 PSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQ 114
Query: 161 LFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDA 220
LF +PE + S+N ++ E AQ F++M +D SW TM+ G A G ++ A
Sbjct: 115 LFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKA 174
Query: 221 RELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLN 280
RELF M +N VSWN MI GY + L++A F+ P R + +W ++TG+++ +
Sbjct: 175 RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVE 234
Query: 281 RAEKLFHEMP-QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
AE +F +M KN++TW AM++GYV++ E+ LK+F + + ++PN+ + L
Sbjct: 235 LAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM-LEEGIRPNSSGLSSALLG 293
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
CS+L+ L G+QIHQ++SK+ +++LI+MY KCGEL A ++F+ +++++D++
Sbjct: 294 CSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFE--VMKKKDVV 351
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
+WN MI+ YA HG +A+ LF +M + + + +T+V +L AC+HAGLV G+ YF+ +
Sbjct: 352 AWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
Query: 460 LKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADI 519
+++ ++ + DHY C+VDL GRAG+L+EA +I + +V+G LL C VH N ++
Sbjct: 412 VRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVEL 471
Query: 520 GKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGN 579
+ A+K+L++ +NA Y L+N+YAS +W++ A VR +MK+ + K PG SW+E+ N
Sbjct: 472 AEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRN 531
Query: 580 TVQVFVVGDKSHSQ 593
V F D+ H +
Sbjct: 532 KVHHFRSSDRIHPE 545
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 177/339 (52%), Gaps = 12/339 (3%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGY 118
R+ +A +LFD +PE D + M++ Y+ ++A+ FD KD +W ++ GY
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM-PFKDAASWNTMITGY 165
Query: 119 VKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIK 178
+ ++E+A LFY M E+N SWN MI GY G EKA F+ P R VV+W +I
Sbjct: 166 ARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMIT 225
Query: 179 ALSECGRIEDAQWHFNQMR-ERDVKSWTTMVDGLAINGRVDDARELFDRM---PVR-NVV 233
+ ++E A+ F M +++ +W M+ G N R +D +LF M +R N
Sbjct: 226 GYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSS 285
Query: 234 SWNVMIKGYAKNRRLDEALELFERMPE----RDMPSWNTLVTGFIQNGDLNRAEKLFHEM 289
+ + G ++ L ++ + + + D+ + +L++ + + G+L A KLF M
Sbjct: 286 GLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM 345
Query: 290 PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG 349
+K+V+ W AM++GY QHG +++AL +F ++ D+ ++P+ TFV VL AC+ +N G
Sbjct: 346 KKKDVVAWNAMISGYAQHGNADKALCLFREM-IDNKIRPDWITFVAVLLACNHAGLVNIG 404
Query: 350 QQ-IHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
++ + + ++++ + G+L A ++
Sbjct: 405 MAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKL 443
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/312 (32%), Positives = 160/312 (51%), Gaps = 27/312 (8%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
NT I+ + G ++ AR+LF M E++ W MI+GYI CG +++A F ++ V
Sbjct: 159 NTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVA-PVRGV 217
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMP-ERNVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
V WTA++ GY+K ++E AE +F +M +N+ +WN MI GY N + E L LFR M E
Sbjct: 218 VAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLE 277
Query: 168 RNVVSWNT-IIKALSECGRIEDAQW--HFNQMRER-----DVKSWTTMVDGLAINGRVDD 219
+ ++ + AL C + Q +Q+ + DV + T+++ G + D
Sbjct: 278 EGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGD 337
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNTLVTGFI---Q 275
A +LF+ M ++VV+WN MI GYA++ D+AL LF M + + P W T V +
Sbjct: 338 AWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNH 397
Query: 276 NGDLNRAEKLFHEM-------PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
G +N F M PQ + +T M+ + G EEALK+ + +P
Sbjct: 398 AGLVNIGMAYFESMVRDYKVEPQPD--HYTCMVDLLGRAGKLEEALKLIRSM----PFRP 451
Query: 329 NTGTFVTVLGAC 340
+ F T+LGAC
Sbjct: 452 HAAVFGTLLGAC 463
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 358 bits (919), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 183/543 (33%), Positives = 310/543 (57%), Gaps = 49/543 (9%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM------- 165
+LV Y+K +++ A ++F EM ER+V SWN++I+GY NG EK L +F +M
Sbjct: 235 SLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI 294
Query: 166 ------------PERNVVS--------------------WNTIIKALSECGRIEDAQWHF 193
+ ++S NT++ S+CG ++ A+ F
Sbjct: 295 DLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVF 354
Query: 194 NQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLD 249
+M +R V S+T+M+ G A G +A +LF+ M +V + ++ A+ R LD
Sbjct: 355 REMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLD 414
Query: 250 EALELFERMPERDMP----SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYV 305
E + E + E D+ N L+ + + G + AE +F EM K++I+W ++ GY
Sbjct: 415 EGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 306 QHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQEST 365
++ + EAL +FN L + P+ T VL AC+ L+ ++G++IH I + +
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 366 YVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQ 425
+V ++L++MY+KCG L +A +FD+ + +DL+SW MIA Y HG+GKEAI LFN+M+
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDD--IASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 426 ELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRL 485
+ G +A+++++V LL ACSH+GLV+EG ++F+ + I+ +HYAC+VD+ R G L
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 486 KEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMY 545
+A+ IE + + ++WG LL GC +H + + + VA+K+ ++EPEN G Y L++N+Y
Sbjct: 653 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 712
Query: 546 ASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLH 605
A KW++ +R ++ +GL+K PGCSW+E+ V +FV GD S+ ++E + L +
Sbjct: 713 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVR 772
Query: 606 TKM 608
+M
Sbjct: 773 ARM 775
Score = 186 bits (471), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 141/558 (25%), Positives = 266/558 (47%), Gaps = 79/558 (14%)
Query: 23 FIINGYPFLRTMSTSTSSLHS---AMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLW 79
++I LRT+S S+ + ++ D NT + R C+ G +++A KL + D
Sbjct: 36 YVIFNRASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWD---- 91
Query: 80 GTMINGYIMCGVIK---EARKLFDGPDA---------MKDVVTWTALVNGYVKLNQIEEA 127
I+ +C V++ +++ L DG + + D + L Y ++EA
Sbjct: 92 ---IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEA 148
Query: 128 ERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM---------------------- 165
R+F E+ WN +++ A++G ++ LF++M
Sbjct: 149 SRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSL 208
Query: 166 ------------------PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTM 207
ERN V N+++ + R++ A+ F++M ERDV SW ++
Sbjct: 209 RSVHGGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSI 267
Query: 208 VDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALEL----FERMP 259
++G NG + +F +M V + + + G A +R + + +
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 260 ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
R+ NTL+ + + GDL+ A+ +F EM ++V+++T+M+ GY + GL+ EA+K+F +
Sbjct: 328 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
++ + + P+ T VL C+ L+EG+++H+ I + +V +AL++MY+KCG
Sbjct: 388 ME-EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCG 446
Query: 380 ELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN-KMQELGFQANDVTYVE 438
+ A +F E +R +D+ISWN +I Y+ + Y EA++LFN ++E F ++ T
Sbjct: 447 SMQEAELVFSE--MRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 439 LLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA-CLVDLCGRAGRLKEAFNIIEGLGV 497
+L AC+ ++G + +++N R H A LVD+ + G L A + + +
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAKCGALLLAHMLFDDIAS 562
Query: 498 DLSLSVWGPLLAGCNVHG 515
L W ++AG +HG
Sbjct: 563 K-DLVSWTVMIAGYGMHG 579
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 147/310 (47%), Gaps = 20/310 (6%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDA--- 104
CNT + + G +D A+ +F M +R + + +MI GY G+ EA KLF+ +
Sbjct: 334 CNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGI 393
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALD 160
DV T TA++N + ++E +R+ + E ++ N ++D YA+ G ++A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 161 LFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER-----DVKSWTTMVDGLAING 215
+F M ++++SWNTII S+ +A FN + E D ++ ++ A
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 216 RVDDARELFDRMPVRNVVS----WNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVT 271
D RE+ + S N ++ YAK L A LF+ + +D+ SW ++
Sbjct: 514 AFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIA 573
Query: 272 GFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
G+ +G A LF++M Q + I++ +++ GL +E + FN ++ + ++
Sbjct: 574 GYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIE 633
Query: 328 PNTGTFVTVL 337
P + ++
Sbjct: 634 PTVEHYACIV 643
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 355 bits (911), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 208/614 (33%), Positives = 323/614 (52%), Gaps = 56/614 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG---PDAM 105
+ I+ L + GRI AR++FD MPE D W TM+ Y G+ +EA LF DA
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 106 KDVVTWTA-----------------------------------LVNGYVKLNQIEEAERL 130
D ++TA L++ Y K + A ++
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 131 FYEM--PERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIED 188
F +M RN +W +++ Y Q E ALD+F MP+R +WN +I + CG++E
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLES 187
Query: 189 AQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMP----VRN-----VVSWNVMI 239
F +M E + K L D + ++ RM ++N V + N ++
Sbjct: 188 CLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVL 247
Query: 240 KGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTA 299
Y K D+A+ E + SWN+++ ++ G+ +A ++FH P+KN++TWT
Sbjct: 248 SFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTT 307
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
M+TGY ++G E+AL+ F ++ + + + VL ACS LA L G+ IH +
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKS-GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHC 366
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAIN 419
FQ YV +AL+N+Y+KCG++ A R F G + +DL+SWN M+ A+ HG +A+
Sbjct: 367 GFQGYAYVGNALVNLYAKCGDIKEADRAF--GDIANKDLVSWNTMLFAFGVHGLADQALK 424
Query: 420 LFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLC 479
L++ M G + ++VT++ LLT CSH+GLVEEG F+ ++K+ I + DH C++D+
Sbjct: 425 LYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMF 484
Query: 480 GRAGRLKEAFNII---EGLGVDLSL-SVWGPLLAGCNVHGNADIGKLVAKKILKIEPENA 535
GR G L EA ++ L D S S W LL C+ H + ++G+ V+K + EP
Sbjct: 485 GRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEE 544
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
++ LLSN+Y S G+WKE +VR +M ++G+KK PGCSW+EVGN V FVVGD SH + E
Sbjct: 545 MSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLE 604
Query: 596 LLGYLLLDLHTKMK 609
L L L +M+
Sbjct: 605 ELSETLNCLQHEMR 618
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 212/466 (45%), Gaps = 46/466 (9%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
M +V T+ + K +I A ++F MPE + +WNTM+ Y+R G ++A+ LF +
Sbjct: 1 MSVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ 60
Query: 165 M----PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAIN--GRVD 218
+ + + S+ I+ + G ++ + + R + V+ I+ G+
Sbjct: 61 LRFSDAKPDDYSFTAILSTCASLGNVKFGR-KIQSLVIRSGFCASLPVNNSLIDMYGKCS 119
Query: 219 D---ARELFDRMPV--RNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGF 273
D A ++F M RN V+W ++ Y + + AL++F MP+R +WN +++G
Sbjct: 120 DTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGH 179
Query: 274 IQNGDLNRAEKLFHEMPQK----NVITWTAMM------TGYVQHGLSEEALKIFNKLQAD 323
G L LF EM + + T++++M + V +G A+ + N +
Sbjct: 180 AHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSA 239
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
K + +F T LG+ D + E + I +++++ ++ ++I+ K GE
Sbjct: 240 VEAKNSVLSFYTKLGSRDD--AMRELESI-EVLTQVSWN-------SIIDACMKIGETEK 289
Query: 384 ARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
A +F L ++++++W MI Y +G G++A+ F +M + G ++ Y +L AC
Sbjct: 290 ALEVFH--LAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHAC 347
Query: 444 SHAGLVEEGLQYFDKLLKNRSIQVREDHYA----CLVDLCGRAGRLKEAFNIIEGLGVDL 499
S L+ G K++ I YA LV+L + G +KEA + +
Sbjct: 348 SGLALLGHG-----KMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NK 401
Query: 500 SLSVWGPLLAGCNVHGNADIG-KLVAKKILK-IEPENAGTYSLLSN 543
L W +L VHG AD KL I I+P+N LL+
Sbjct: 402 DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTT 447
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/417 (21%), Positives = 167/417 (40%), Gaps = 98/417 (23%)
Query: 47 DCNTSISRLCQEGRIDDARKLFDRMPERDL--HLWGTMINGYIMCGVIKEARKLFDGPDA 104
DC T S L D + ++ RM + + W + + V+ KL DA
Sbjct: 203 DCYT-FSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKN--SVLSFYTKLGSRDDA 259
Query: 105 MKDV--------VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTE 156
M+++ V+W ++++ +K+ + E+A +F+ PE+N+ +W TMI GY RNG E
Sbjct: 260 MRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGE 319
Query: 157 KALDLFRRMPERNVVS---------------------------------------WNTII 177
+AL F M + V S N ++
Sbjct: 320 QALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALV 379
Query: 178 KALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV 237
++CG I++A F + +D+ SW TM+ ++G D A +L+D M + NV
Sbjct: 380 NLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNV 439
Query: 238 MIKGY----AKNRRLDEALELFERMPER-----DMPSWNTLVTGFIQNGDLNRAEKLFHE 288
G + + ++E +FE M + ++ ++ F + G L A+ L
Sbjct: 440 TFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL--- 496
Query: 289 MPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
T+++++T N ++ T+LGACS
Sbjct: 497 -----ATTYSSLVTD-----------------------SSNNSSWETLLGACSTHWHTEL 528
Query: 349 GQQIHQLIS-KTAFQESTYVVSALINMYSKCG---ELHIARRIFDEGLLRQRDLISW 401
G+++ +++ +E ++V+ L N+Y G E RR E +++ SW
Sbjct: 529 GREVSKVLKIAEPSEEMSFVL--LSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSW 583
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 209/628 (33%), Positives = 342/628 (54%), Gaps = 64/628 (10%)
Query: 24 IINGYPFLRTMSTSTSSLHSAMKDC---NTSISRLCQEGRIDDARKLFDRMPERDLHLWG 80
++ GY R M+ + + K+ ++ LC +GR +DA +LFD MPER++ W
Sbjct: 114 MLTGYVKCRRMNEAWTLFREMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPERNVVSWN 173
Query: 81 TMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
T++ G I G +++A+++FD + +DVV+W A++ GY++ + +EEA+ LF +M E+NV
Sbjct: 174 TLVTGLIRNGDMEKAKQVFDAMPS-RDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVV 232
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERD 200
+W +M+ GY R G +A LF MPERN+VSW +I + +A F +M+ +D
Sbjct: 233 TWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMK-KD 291
Query: 201 VKS-------------------------------------WTT----------MVDGLAI 213
V + W T +V A
Sbjct: 292 VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYAS 351
Query: 214 NGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE-RDMPSWNTLVTG 272
+G + A+ L + ++ S N++I Y KN L+ A LFER+ D SW +++ G
Sbjct: 352 SGLIASAQSLLNE--SFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDG 409
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+++ GD++RA LF ++ K+ +TWT M++G VQ+ L EA + + + LKP T
Sbjct: 410 YLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDM-VRCGLKPLNST 468
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKT--AFQESTYVVSALINMYSKCGELHIARRIFDE 390
+ +L + + L++G+ IH +I+KT + + ++L++MY+KCG + A IF +
Sbjct: 469 YSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAK 528
Query: 391 GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVE 450
+ Q+D +SWN MI +HHG +A+NLF +M + G + N VT++ +L+ACSH+GL+
Sbjct: 529 --MVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLIT 586
Query: 451 EGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
GL+ F + + SIQ DHY ++DL GRAG+LKEA I L +V+G LL
Sbjct: 587 RGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGL 646
Query: 511 CNVH----GNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
C ++ I + A ++L+++P NA + L N+YA +G+ +R +M KG+
Sbjct: 647 CGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGV 706
Query: 567 KKQPGCSWVEVGNTVQVFVVGDKSHSQS 594
KK PGCSWV V VF+ GDKS S++
Sbjct: 707 KKTPGCSWVVVNGRANVFLSGDKSASEA 734
Score = 246 bits (627), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 165/526 (31%), Positives = 272/526 (51%), Gaps = 55/526 (10%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTW 111
I R EG + AR L D++P+R ++ VV W
Sbjct: 49 ILRRLSEGGLVHARHLLDKIPQRG----------------------------SINRVVYW 80
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV 171
T+L++ Y K ++EA LF MPERN+ + N M+ GY + + +A LFR MP +NVV
Sbjct: 81 TSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVV 139
Query: 172 SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRN 231
SW ++ AL + GR EDA F++M ER+V SW T+V GL NG ++ A+++FD MP R+
Sbjct: 140 SWTVMLTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRD 199
Query: 232 VVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ 291
VVSWN MIKGY +N ++EA LF M E+++ +W ++V G+ + GD+ A +LF EMP+
Sbjct: 200 VVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPE 259
Query: 292 KNVITWTAMMTGYVQHGLSEEALKIFNKLQAD-HALKPNTGTFVTVLGACSDLA--GLNE 348
+N+++WTAM++G+ + L EAL +F +++ D A+ PN T +++ AC L
Sbjct: 260 RNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRL 319
Query: 349 GQQIHQLISKTAFQESTY---VVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMI 405
G+Q+H + ++ + + +L++MY+ G + A+ + +E DL S N +I
Sbjct: 320 GEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESF----DLQSCNIII 375
Query: 406 AAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSI 465
Y +G + A LF +++ L + V++ ++ AG V F KL +
Sbjct: 376 NRYLKNGDLERAETLFERVKSL---HDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV 432
Query: 466 QVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVHGNADIGK- 521
+ ++ + EA +++ + G+ S + LL+ N D GK
Sbjct: 433 T-----WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 522 ---LVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 564
++AK +P+ SL+S MYA G ++A + KM K
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVS-MYAKCGAIEDAYEIFAKMVQK 532
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 352 bits (904), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 344/644 (53%), Gaps = 88/644 (13%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYI------------------------ 87
+S C+ G +D+A ++F+ + + L+ TM+ G+
Sbjct: 76 VSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVV 135
Query: 88 --------MCG------VIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYE 133
+CG V KE L D+ T L N Y K Q+ EA ++F
Sbjct: 136 YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
Query: 134 MPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSECGRIE----D 188
MPER++ SWNT++ GY++NG AL++ + M E N+ S+ TI+ L +
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 189 AQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKN 245
+ H MR + V T +VD A G ++ AR+LFD M RNVVSWN MI Y +N
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 246 RRLDEALELFERM------P---------------------------------ERDMPSW 266
EA+ +F++M P +R++
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
N+L++ + + +++ A +F ++ + +++W AM+ G+ Q+G +AL F+++++ +
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRS-RTV 434
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
KP+T T+V+V+ A ++L+ + + IH ++ ++ ++ +V +AL++MY+KCG + IAR
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHA 446
IFD ++ +R + +WN MI Y HG+GK A+ LF +MQ+ + N VT++ +++ACSH+
Sbjct: 495 IFD--MMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 552
Query: 447 GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGP 506
GLVE GL+ F + +N SI++ DHY +VDL GRAGRL EA++ I + V +++V+G
Sbjct: 553 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 612
Query: 507 LLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
+L C +H N + + A+++ ++ P++ G + LL+N+Y + W++ VR+ M +GL
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 567 KKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
+K PGCS VE+ N V F G +H S+ + L L +K+
Sbjct: 673 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKE 716
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 135/483 (27%), Positives = 237/483 (49%), Gaps = 67/483 (13%)
Query: 89 CGVIKEARKLFDGPDAMKDVVTW-----TALVNGYVKLNQIEEAERLFYEMPERNVRSWN 143
C +KE R++ P K+ + T LV+ + + ++EA R+F + + ++
Sbjct: 47 CSSLKELRQIL--PLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYH 104
Query: 144 TMIDGYARNGQTEKALDLFRRMPERNV--VSWNTIIKALSECGRIEDAQWHF-NQMRERD 200
TM+ G+A+ +KAL F RM +V V +N L CG ++A+ ++
Sbjct: 105 TMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYN-FTYLLKVCG--DEAELRVGKEIHGLL 161
Query: 201 VKSWTTMVDGLAING---------RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEA 251
VKS ++ D A+ G +V++AR++FDRMP R++VSWN ++ GY++N A
Sbjct: 162 VKSGFSL-DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 220
Query: 252 LELFERMPERDM-PSWNTLV------------------------TGF------------- 273
LE+ + M E ++ PS+ T+V +GF
Sbjct: 221 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDM 280
Query: 274 -IQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+ G L A +LF M ++NV++W +M+ YVQ+ +EA+ IF K+ D +KP +
Sbjct: 281 YAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM-LDEGVKPTDVS 339
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
+ L AC+DL L G+ IH+L + + VV++LI+MY KC E+ A +F G
Sbjct: 340 VMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMF--GK 397
Query: 393 LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
L+ R L+SWN MI +A +G +A+N F++M+ + + TYV ++TA + +
Sbjct: 398 LQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHA 457
Query: 453 LQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN 512
++ ++ + LVD+ + G + A +I + + ++ W ++ G
Sbjct: 458 -KWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYG 515
Query: 513 VHG 515
HG
Sbjct: 516 THG 518
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 76/394 (19%)
Query: 4 LPPLSFILMHAPKLKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDD 63
LP +S + + + + H + +G+ L +ST+ +++ + G ++
Sbjct: 243 LPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA-------------KCGSLET 289
Query: 64 ARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD----------------------- 100
AR+LFD M ER++ W +MI+ Y+ KEA +F
Sbjct: 290 ARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACAD 349
Query: 101 -----------------GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWN 143
G D ++V +L++ Y K +++ A +F ++ R + SWN
Sbjct: 350 LGDLERGRFIHKLSVELGLD--RNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWN 407
Query: 144 TMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIEDAQW-HFNQMR- 197
MI G+A+NG+ AL+ F +M R V ++ ++I A++E A+W H MR
Sbjct: 408 AMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRS 467
Query: 198 --ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELF 255
+++V T +VD A G + AR +FD M R+V +WN MI GY + ALELF
Sbjct: 468 CLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELF 527
Query: 256 ERMPERDMP----SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT-----WTAMMTGYVQ 306
E M + + ++ ++++ +G + K F+ M + I + AM+ +
Sbjct: 528 EEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGR 587
Query: 307 HGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC 340
G EA ++ +KP + +LGAC
Sbjct: 588 AGRLNEAWDFIMQM----PVKPAVNVYGAMLGAC 617
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 138/268 (51%), Gaps = 21/268 (7%)
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
LV+ F + G ++ A ++F + K + + M+ G+ + ++AL+ F +++ D ++P
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDD-VEP 133
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
F +L C D A L G++IH L+ K+ F + ++ L NMY+KC +++ AR++F
Sbjct: 134 VVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVF 193
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGL 448
D + +RDL+SWN ++A Y+ +G + A+ + M E + + +T V +L A S L
Sbjct: 194 DR--MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRL 251
Query: 449 VEEGLQY--------FDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLS 500
+ G + FD L+ + LVD+ + G L+ A + +G+ ++ +
Sbjct: 252 ISVGKEIHGYAMRSGFDSLVNIST---------ALVDMYAKCGSLETARQLFDGM-LERN 301
Query: 501 LSVWGPLLAGCNVHGNADIGKLVAKKIL 528
+ W ++ + N L+ +K+L
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKML 329
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 350 bits (899), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 200/638 (31%), Positives = 330/638 (51%), Gaps = 82/638 (12%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGY---------IMC------------- 89
++ C G + AR FD + RD++ W MI+GY I C
Sbjct: 93 VNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPD 152
Query: 90 -----GVIKEARKLFDGPDA---------MKDVVTWTALVNGYVKLNQIEEAERLFYEMP 135
V+K R + DG M DV +L++ Y + + A LF EMP
Sbjct: 153 YRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP 212
Query: 136 ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDA----QW 191
R++ SWN MI GY ++G ++AL L + + V+ +++ A +E G +
Sbjct: 213 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSY 272
Query: 192 HFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEA 251
E ++ ++D A GR+ D +++FDRM VR+++SWN +IK Y N + A
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 252 LELFERM------PE----------------------------------RDMPSWNTLVT 271
+ LF+ M P+ D+ N +V
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVV 392
Query: 272 GFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
+ + G ++ A +F+ +P +VI+W +++GY Q+G + EA++++N ++ + + N G
Sbjct: 393 MYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQG 452
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
T+V+VL ACS L +G ++H + K +VV++L +MY KCG L A +F +
Sbjct: 453 TWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQ- 511
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEE 451
+ + + + WN +IA + HG+G++A+ LF +M + G + + +T+V LL+ACSH+GLV+E
Sbjct: 512 -IPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDE 570
Query: 452 GLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGC 511
G F+ + + I HY C+VD+ GRAG+L+ A I+ + + S+WG LL+ C
Sbjct: 571 GQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSAC 630
Query: 512 NVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPG 571
VHGN D+GK+ ++ + ++EPE+ G + LLSNMYAS GKW+ +R KGL+K PG
Sbjct: 631 RVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPG 690
Query: 572 CSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
S +EV N V+VF G+++H E + L L K+K
Sbjct: 691 WSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLK 728
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/483 (26%), Positives = 230/483 (47%), Gaps = 50/483 (10%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
+++V LVN Y L + A F + R+V +WN MI GY R G + + + F
Sbjct: 83 IQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSL 142
Query: 165 MPERNVVS--WNTIIKALSECGRIEDA-QWHFNQMRER---DVKSWTTMVDGLAINGRVD 218
+ ++ + T L C + D + H ++ DV +++ + V
Sbjct: 143 FMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVG 202
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGD 278
+AR LFD MPVR++ SWN MI GY ++ EAL L + D + +L++ + GD
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGD 262
Query: 279 LNR-----------------------------------AEKLFHEMPQKNVITWTAMMTG 303
NR +K+F M +++I+W +++
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 304 YVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL-ISKTAFQ 362
Y + A+ +F +++ ++P+ T +++ S L + + + + K F
Sbjct: 323 YELNEQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFL 381
Query: 363 ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
E + +A++ MY+K G + AR +F+ L D+ISWN +I+ YA +G+ EAI ++N
Sbjct: 382 EDITIGNAVVVMYAKLGLVDSARAVFN--WLPNTDVISWNTIISGYAQNGFASEAIEMYN 439
Query: 423 KMQELG-FQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGR 481
M+E G AN T+V +L ACS AG + +G++ +LLKN + + L D+ G+
Sbjct: 440 IMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGK 498
Query: 482 AGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPENAGTYS 539
GRL++A ++ + S+ W L+A HG+ + ++ K++L ++P++ +
Sbjct: 499 CGRLEDALSLFYQIPRVNSVP-WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 557
Query: 540 LLS 542
LLS
Sbjct: 558 LLS 560
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 173/397 (43%), Gaps = 62/397 (15%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIM-------CGVIK 93
L S + N I + GR+ D +K+FDRM RDL W ++I Y + + +
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 94 EARKLFDGPDA--------------------------------MKDVVTWTALVNGYVKL 121
E R PD ++D+ A+V Y KL
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 122 NQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER-----NVVSWNTI 176
++ A +F +P +V SWNT+I GYA+NG +A++++ M E N +W ++
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 177 IKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNV 232
+ A S+ G + ++ + DV T++ D GR++DA LF ++P N
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 233 VSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHE 288
V WN +I + + ++A+ LF+ M + D ++ TL++ +G ++ + F
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577
Query: 289 MPQKNVIT-----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
M IT + M+ Y + G E ALK + +L+P+ + +L AC
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM----SLQPDASIWGALLSACRVH 633
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
++ G+ + + + + Y V L NMY+ G+
Sbjct: 634 GNVDLGKIASEHLFEVEPEHVGYHV-LLSNMYASAGK 669
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 348 bits (894), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 196/588 (33%), Positives = 319/588 (54%), Gaps = 44/588 (7%)
Query: 51 SISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPD------A 104
+++ L ++ ARK+FD +P+ + W T+I Y GPD A
Sbjct: 70 AMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA------------SGPDPVLSIWA 117
Query: 105 MKDVV----------TWTALVNGYVKLNQIEEAERLFYEMPERNVRS----WNTMIDGYA 150
D+V T+ L+ +++ + + L + V S N++I Y
Sbjct: 118 FLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYF 177
Query: 151 RNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK-SWTTMVD 209
G + A +F + E++VVSWN++I + G + A F +M DVK S TMV
Sbjct: 178 SCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 210 GLAINGRVDD---ARELF-----DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER 261
L+ ++ + R++ +R+ V N+ N M+ Y K +++A LF+ M E+
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNV-NLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 296
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
D +W T++ G+ + D A ++ + MPQK+++ W A+++ Y Q+G EAL +F++LQ
Sbjct: 297 DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
+K N T V+ L AC+ + L G+ IH I K + + +V SALI+MYSKCG+L
Sbjct: 357 LQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDL 416
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
+R +F+ + +RD+ W+ MI A HG G EA+++F KMQE + N VT+ +
Sbjct: 417 EKSREVFNS--VEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFC 474
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSL 501
ACSH GLV+E F ++ N I E HYAC+VD+ GR+G L++A IE + + S
Sbjct: 475 ACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPST 534
Query: 502 SVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKM 561
SVWG LL C +H N ++ ++ ++L++EP N G + LLSN+YA +GKW+ + +R M
Sbjct: 535 SVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHM 594
Query: 562 KDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
+ GLKK+PGCS +E+ + F+ GD +H SE + L ++ K+K
Sbjct: 595 RVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLK 642
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 180/390 (46%), Gaps = 65/390 (16%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERD--------------------------------- 75
N+ I+ Q+G D A +LF +M D
Sbjct: 201 NSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEE 260
Query: 76 ------LHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAER 129
L L M++ Y CG I++A++LFD + KD VTWT +++GY E A
Sbjct: 261 NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE-KDNVTWTTMLDGYAISEDYEAARE 319
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN--TIIKALSEC---G 184
+ MP++++ +WN +I Y +NG+ +AL +F + + + N T++ LS C G
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 185 RIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIK 240
+E +W + +++ ++ + ++ + G ++ +RE+F+ + R+V W+ MI
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 241 GYAKNRRLDEALELFERMPERDM-PSWNTLVTGFI---QNGDLNRAEKLFHEMPQKNVIT 296
G A + +EA+++F +M E ++ P+ T F G ++ AE LFH+M I
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIV 499
Query: 297 -----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ 351
+ ++ + G E+A+K + + P+T + +LGAC A LN +
Sbjct: 500 PEEKHYACIVDVLGRSGYLEKAVKFIEAM----PIPPSTSVWGALLGACKIHANLNLAEM 555
Query: 352 -IHQLISKTAFQESTYVVSALINMYSKCGE 380
+L+ + +V+ L N+Y+K G+
Sbjct: 556 ACTRLLELEPRNDGAHVL--LSNIYAKLGK 583
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 345 bits (884), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 178/492 (36%), Positives = 289/492 (58%), Gaps = 16/492 (3%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSW 173
L+ Y+K + +A ++F +M RN+ SWN M+ GY ++G +A +F MPER+VVSW
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSW 147
Query: 174 NTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPV 229
NT++ ++ G + +A W + + R +K S+ ++ + ++ R+ ++ V
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 230 ----RNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKL 285
NVV +I YAK +++ A F+ M +D+ W TL++G+ + GD+ AEKL
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
Query: 286 FHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAG 345
F EMP+KN ++WTA++ GYV+ G AL +F K+ A +KP TF + L A + +A
Sbjct: 268 FCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA-LGVKPEQFTFSSCLCASASIAS 326
Query: 346 LNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF---DEGLLRQRDLISWN 402
L G++IH + +T + + V+S+LI+MYSK G L + R+F D+ + D + WN
Sbjct: 327 LRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD----KHDCVFWN 382
Query: 403 GMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKN 462
MI+A A HG G +A+ + + M + Q N T V +L ACSH+GLVEEGL++F+ +
Sbjct: 383 TMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQ 442
Query: 463 RSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKL 522
I ++HYACL+DL GRAG KE IE + + +W +L C +HGN ++GK
Sbjct: 443 HGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKK 502
Query: 523 VAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQ 582
A +++K++PE++ Y LLS++YA GKW+ +R MK + + K+ SW+E+ V+
Sbjct: 503 AADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVE 562
Query: 583 VFVVGDKSHSQS 594
F V D SH+ +
Sbjct: 563 AFTVSDGSHAHA 574
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 194/420 (46%), Gaps = 59/420 (14%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNG 117
G+ DA K+FD+M R+L+ W M++GY+ G++ AR +FD P+ +DVV+W +V G
Sbjct: 96 GKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPE--RDVVSWNTMVIG 153
Query: 118 YVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER--------N 169
Y + + EA + E ++ G + L L R+ + N
Sbjct: 154 YAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSN 213
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPV 229
VV +II A ++CG++E A+ F++M +D+ WTT++ G A G ++ A +LF MP
Sbjct: 214 VVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPE 273
Query: 230 RNVVSWNVMIKGYAKNRRLDEALELFERM------PERDMPS------------------ 265
+N VSW +I GY + + AL+LF +M PE+ S
Sbjct: 274 KNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEI 333
Query: 266 ---------------WNTLVTGFIQNGDLNRAEKLFHEMPQK-NVITWTAMMTGYVQHGL 309
++L+ + ++G L +E++F K + + W M++ QHGL
Sbjct: 334 HGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGL 393
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ-IHQLISKTAFQESTYVV 368
+AL++ + + ++PN T V +L ACS + EG + + +
Sbjct: 394 GHKALRMLDDM-IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY 452
Query: 369 SALINMYSKCGEL-HIARRIFDEGLLRQRDLISWNGMIAAYAHHG---YGKEAINLFNKM 424
+ LI++ + G + R+I E + + D WN ++ HG GK+A + K+
Sbjct: 453 ACLIDLLGRAGCFKELMRKI--EEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKL 510
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 147/314 (46%), Gaps = 31/314 (9%)
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP 290
N + N +I Y K + +A ++F++M R++ SWN +V+G++++G L RA +F MP
Sbjct: 81 NTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMP 140
Query: 291 QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQ 350
+++V++W M+ GY Q G EAL + + + +K N +F +L AC L +
Sbjct: 141 ERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRS-GIKFNEFSFAGLLTACVKSRQLQLNR 199
Query: 351 QIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR---------------- 394
Q H + F + + ++I+ Y+KCG++ A+R FDE ++
Sbjct: 200 QAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLG 259
Query: 395 -------------QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
+++ +SW +IA Y G G A++LF KM LG + T+ L
Sbjct: 260 DMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLC 319
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSL 501
A + + G + +++ +++ + L+D+ ++G L+ + +
Sbjct: 320 ASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDC 378
Query: 502 SVWGPLLAGCNVHG 515
W +++ HG
Sbjct: 379 VFWNTMISALAQHG 392
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 182/417 (43%), Gaps = 57/417 (13%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA------------- 95
N +S + G + AR +FD MPERD+ W TM+ GY G + EA
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 96 ----------------RKLFDGPDA---------MKDVVTWTALVNGYVKLNQIEEAERL 130
R+L A + +VV ++++ Y K Q+E A+R
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 131 FYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQ 190
F EM +++ W T+I GYA+ G E A LF MPE+N VSW +I G A
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 191 WHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFD---RMPVR-NVVSWNVMIKGY 242
F +M VK ++++ + A + +E+ R VR N + + +I Y
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 243 AKNRRLDEALELFERMPER-DMPSWNTLVTGFIQNGDLNRAEKLFHEM----PQKNVITW 297
+K+ L+ + +F ++ D WNT+++ Q+G ++A ++ +M Q N T
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTL 416
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAG-LNEGQQIHQLI 356
++ GL EE L+ F + H + P+ + ++ DL G +++ + I
Sbjct: 417 VVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLI----DLLGRAGCFKELMRKI 472
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL-LRQRDLISWNGMIAAYAHHG 412
+ F+ ++ +A++ + G + ++ DE + L + + + YA HG
Sbjct: 473 EEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHG 529
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 120/269 (44%), Gaps = 39/269 (14%)
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQE-STYVVSALINMYSKCGELHIARRIFDEG 391
++L C D L +G+ IH+ + T F+ +T + + LI MY KCG+ A ++FD+
Sbjct: 49 LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQM 108
Query: 392 LLR-----------------------------QRDLISWNGMIAAYAHHGYGKEAINLFN 422
LR +RD++SWN M+ YA G EA+ +
Sbjct: 109 HLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYK 168
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC-LVDLCGR 481
+ + G + N+ ++ LLTAC + ++ Q ++L + +C ++D +
Sbjct: 169 EFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLS--NVVLSCSIIDAYAK 226
Query: 482 AGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPE-NAGTYSL 540
G+++ A + + V + +W L++G G+ + A+K+ PE N +++
Sbjct: 227 CGQMESAKRCFDEMTVK-DIHIWTTLISGYAKLGDME----AAEKLFCEMPEKNPVSWTA 281
Query: 541 LSNMYASVGKWKEAANVRMKMKDKGLKKQ 569
L Y G A ++ KM G+K +
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPE 310
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/637 (32%), Positives = 337/637 (52%), Gaps = 90/637 (14%)
Query: 60 RIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDA--------------- 104
+++ A K+F+ + E++ W MI GY G + +LF +
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 105 -----------------------MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS 141
K++ ALV+ Y K +E+A ++F M +R+ +
Sbjct: 437 TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT 496
Query: 142 WNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKA-LSEC----GRIEDAQWHFNQM 196
WNT+I Y ++ +A DLF+RM +VS + + L C G + Q H +
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSV 556
Query: 197 R---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALE 253
+ +RD+ + ++++D + G + DAR++F +P +VVS N +I GY++N L+EA+
Sbjct: 557 KCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN-LEEAVV 615
Query: 254 LFERMPERDM-PSWNTLVT------------------------GFIQNGD---------- 278
LF+ M R + PS T T GF G+
Sbjct: 616 LFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMY 675
Query: 279 -----LNRAEKLFHEMPQ-KNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+ A LF E+ K+++ WT MM+G+ Q+G EEALK + +++ D L P+ T
Sbjct: 676 MNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVL-PDQAT 734
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
FVTVL CS L+ L EG+ IH LI A + LI+MY+KCG++ + ++FDE +
Sbjct: 735 FVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE-M 793
Query: 393 LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
R+ +++SWN +I YA +GY ++A+ +F+ M++ +++T++ +LTACSHAG V +G
Sbjct: 794 RRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDG 853
Query: 453 LQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN 512
+ F+ ++ I+ R DH AC+VDL GR G L+EA + IE + +W LL C
Sbjct: 854 RKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACR 913
Query: 513 VHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 572
+HG+ G++ A+K++++EP+N+ Y LLSN+YAS G W++A +R M+D+G+KK PG
Sbjct: 914 IHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGY 973
Query: 573 SWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
SW++V +F GDKSHS+ + L DL+ MK
Sbjct: 974 SWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLYDLMK 1010
Score = 183 bits (464), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 126/447 (28%), Positives = 224/447 (50%), Gaps = 37/447 (8%)
Query: 64 ARKLFDRMPER---DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVK 120
+RK+FD MP+R L + + + ++ G+ E R A+V+ Y K
Sbjct: 61 SRKVFDEMPQRLALALRIGKAVHSKSLILGIDSEGR-------------LGNAIVDLYAK 107
Query: 121 LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKA 179
Q+ AE+ F + E++V +WN+M+ Y+ G+ K L F + E + T
Sbjct: 108 CAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIV 166
Query: 180 LSECGRIEDAQW----HFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV 232
LS C R + ++ H + ++ ER+ +VD A R+ DAR +F+ + N
Sbjct: 167 LSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNT 226
Query: 233 VSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHE 288
V W + GY K +EA+ +FERM + D ++ T++ +I+ G L A LF E
Sbjct: 227 VCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGE 286
Query: 289 MPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
M +V+ W M++G+ + G A++ F ++ ++K T +VL A +A L+
Sbjct: 287 MSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKS-SVKSTRSTLGSVLSAIGIVANLDL 345
Query: 349 GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAY 408
G +H K + YV S+L++MYSKC ++ A ++F+ L +++ + WN MI Y
Sbjct: 346 GLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEA--LEEKNDVFWNAMIRGY 403
Query: 409 AHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVR 468
AH+G + + LF M+ G+ +D T+ LL+ C+ + +E G Q+ ++K + +
Sbjct: 404 AHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK---LA 460
Query: 469 EDHYA--CLVDLCGRAGRLKEAFNIIE 493
++ + LVD+ + G L++A I E
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFE 487
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 252/555 (45%), Gaps = 90/555 (16%)
Query: 50 TSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGV---------------IKE 94
T I+ + G++ DAR LF M D+ W MI+G+ G +K
Sbjct: 266 TVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKS 325
Query: 95 ARK------------------LFDGPDAMK-----DVVTWTALVNGYVKLNQIEEAERLF 131
R L +A+K ++ ++LV+ Y K ++E A ++F
Sbjct: 326 TRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVF 385
Query: 132 YEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSECGRIED-- 188
+ E+N WN MI GYA NG++ K ++LF M + T LS C D
Sbjct: 386 EALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLE 445
Query: 189 --AQWHFNQMRERDVKSW---TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
+Q+H ++++ K+ +VD A G ++DAR++F+RM R+ V+WN +I Y
Sbjct: 446 MGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYV 505
Query: 244 KNRRLDEALELFERMP---------------------------------------ERDMP 264
++ EA +LF+RM +RD+
Sbjct: 506 QDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 265 SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
+ ++L+ + + G + A K+F +P+ +V++ A++ GY Q+ L EEA+ +F ++
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLT-R 623
Query: 325 ALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAF-QESTYVVSALINMYSKCGELHI 383
+ P+ TF T++ AC L G Q H I+K F E Y+ +L+ MY +
Sbjct: 624 GVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTE 683
Query: 384 ARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
A +F E L + ++ W GM++ ++ +G+ +EA+ + +M+ G + T+V +L C
Sbjct: 684 ACALFSE-LSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVC 742
Query: 444 SHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSV 503
S + EG + L+ + + + E L+D+ + G +K + + + + ++
Sbjct: 743 SVLSSLREG-RAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVS 801
Query: 504 WGPLLAGCNVHGNAD 518
W L+ G +G A+
Sbjct: 802 WNSLINGYAKNGYAE 816
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 235/506 (46%), Gaps = 54/506 (10%)
Query: 60 RIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDVVTWTALVN 116
RI DAR++F+ + + + W + +GY+ G+ +EA +F+ D + + ++N
Sbjct: 210 RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVIN 269
Query: 117 GYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSW-NT 175
Y++L ++++A LF EM +V +WN MI G+ + G A++ F M + +V S +T
Sbjct: 270 TYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRST 329
Query: 176 IIKALSECGRIEDAQW----HFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMP 228
+ LS G + + H ++ ++ +++V + +++ A ++F+ +
Sbjct: 330 LGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE 389
Query: 229 VRNVVSWNVMIKGYAKNRRLDEALELFERMPE---------------------------- 260
+N V WN MI+GYA N + +ELF M
Sbjct: 390 EKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ 449
Query: 261 -----------RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGL 309
+++ N LV + + G L A ++F M ++ +TW ++ YVQ
Sbjct: 450 FHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDEN 509
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS 369
EA +F ++ + + + L AC+ + GL +G+Q+H L K + S
Sbjct: 510 ESEAFDLFKRMNL-CGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGS 568
Query: 370 ALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGF 429
+LI+MYSKCG + AR++F L + ++S N +IA Y+ + +EA+ LF +M G
Sbjct: 569 SLIDMYSKCGIIKDARKVFSS--LPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGV 625
Query: 430 QANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAF 489
+++T+ ++ AC + G Q+ ++ K E L+ + + + EA
Sbjct: 626 NPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEAC 685
Query: 490 NIIEGLGVDLSLSVWGPLLAGCNVHG 515
+ L S+ +W +++G + +G
Sbjct: 686 ALFSELSSPKSIVLWTGMMSGHSQNG 711
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 238/511 (46%), Gaps = 102/511 (19%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYI----------------MCGVI 92
N + + G ++DAR++F+RM +RD W T+I Y+ +CG++
Sbjct: 467 NALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIV 526
Query: 93 KEA-------------RKLFDGPDAM---------KDVVTWTALVNGYVKLNQIEEAERL 130
+ L+ G +D+ T ++L++ Y K I++A ++
Sbjct: 527 SDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKV 586
Query: 131 FYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRI 186
F +PE +V S N +I GY++N E+A+ LF+ M R V +++ TI++A C +
Sbjct: 587 FSSLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEA---CHKP 642
Query: 187 ED----AQWHFNQMRERDVKSWTTMVD----GLAINGR-VDDARELFDRMPV-RNVVSWN 236
E Q+H Q+ +R S + G+ +N R + +A LF + +++V W
Sbjct: 643 ESLTLGTQFH-GQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWT 701
Query: 237 VMIKGYAKNRRLDEALELFERM------PER----------------------------- 261
M+ G+++N +EAL+ ++ M P++
Sbjct: 702 GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHL 761
Query: 262 ----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK-NVITWTAMMTGYVQHGLSEEALKI 316
D + NTL+ + + GD+ + ++F EM ++ NV++W +++ GY ++G +E+ALKI
Sbjct: 762 AHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKI 821
Query: 317 FNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ-LISKTAFQESTYVVSALINMY 375
F+ ++ H + P+ TF+ VL ACS +++G++I + +I + + V+ ++++
Sbjct: 822 FDSMRQSHIM-PDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
+ G L A + L+ D W+ ++ A HG K+ EL Q N
Sbjct: 881 GRWGYLQEADDFIEAQNLKP-DARLWSSLLGACRIHGDDIRGEISAEKLIELEPQ-NSSA 938
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQ 466
YV L + G E+ K++++R ++
Sbjct: 939 YVLLSNIYASQGCWEKA-NALRKVMRDRGVK 968
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 199/615 (32%), Positives = 328/615 (53%), Gaps = 56/615 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMP--ERDLHLWGTMINGY-----------IMCGVIKEA 95
T +S C G I AR +F++ P RD ++ MI G+ + C + E
Sbjct: 84 TTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEG 143
Query: 96 RK------------LFDGPDAMKDVVTW----------------TALVNGYVKLNQ---- 123
K L D K V + ALV+ Y K
Sbjct: 144 FKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 124 IEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER-NVVSWNTIIKALSE 182
+ A ++F E+ E++ RSW TM+ GY +NG + +L M + +V++N +I
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 183 CGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSW--- 235
G ++A +M E D ++ +++ A G + +++ + R S+
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFD 323
Query: 236 NVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI 295
N ++ Y K + DEA +FE+MP +D+ SWN L++G++ +G + A+ +F EM +KN++
Sbjct: 324 NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNIL 383
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
+W M++G ++G EE LK+F+ ++ + +P F + +C+ L GQQ H
Sbjct: 384 SWMIMISGLAENGFGEEGLKLFSCMKRE-GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 356 ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK 415
+ K F S +ALI MY+KCG + AR++F + D +SWN +IAA HG+G
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRT--MPCLDSVSWNALIAALGQHGHGA 500
Query: 416 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACL 475
EA++++ +M + G + + +T + +LTACSHAGLV++G +YFD + I DHYA L
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 476 VDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENA 535
+DL R+G+ +A ++IE L + +W LL+GC VHGN ++G + A K+ + PE+
Sbjct: 561 IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
GTY LLSNM+A+ G+W+E A VR M+D+G+KK+ CSW+E+ V F+V D SH ++E
Sbjct: 621 GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAE 680
Query: 596 LLGYLLLDLHTKMKK 610
+ L DL +M++
Sbjct: 681 AVYIYLQDLGKEMRR 695
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/503 (22%), Positives = 226/503 (44%), Gaps = 72/503 (14%)
Query: 17 LKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDL 76
++ H + +G ++ ++S + S++S C +S S L ARK+FD + E+D
Sbjct: 169 VQFHAAALKSGAGYITSVSNALVSVYS---KCASSPSLL------HSARKVFDEILEKDE 219
Query: 77 HLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE 136
W TM+ GY+ G +L +G D +V + A+++GYV +EA + M
Sbjct: 220 RSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVS 279
Query: 137 RNVR----SWNTMIDGYARNGQTEKALDLFRRMPERNVVSW---NTIIKALSECGRIEDA 189
+ ++ ++I A G + + + R S+ N+++ +CG+ ++A
Sbjct: 280 SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFHFDNSLVSLYYKCGKFDEA 339
Query: 190 QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLD 249
+ F +M +D+ SW ++ G +G + +A+ +F M +N++SW +MI G A+N +
Sbjct: 340 RAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGE 399
Query: 250 EALELFERMP---------------------------------------ERDMPSWNTLV 270
E L+LF M + + + N L+
Sbjct: 400 EGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALI 459
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNT 330
T + + G + A ++F MP + ++W A++ QHG EA+ ++ ++ ++P+
Sbjct: 460 TMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEM-LKKGIRPDR 518
Query: 331 GTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVV-------SALINMYSKCGELHI 383
T +TVL ACS +++G++ + E+ Y + + LI++ + G+
Sbjct: 519 ITLLTVLTACSHAGLVDQGRKYFDSM------ETVYRIPPGADHYARLIDLLCRSGKFSD 572
Query: 384 ARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
A + + + I W +++ HG + I +K+ L +D TY+ L
Sbjct: 573 AESVIESLPFKPTAEI-WEALLSGCRVHGNMELGIIAADKLFGL-IPEHDGTYMLLSNMH 630
Query: 444 SHAGLVEEGLQYFDKLLKNRSIQ 466
+ G EE + KL+++R ++
Sbjct: 631 AATGQWEE-VARVRKLMRDRGVK 652
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 184/396 (46%), Gaps = 49/396 (12%)
Query: 236 NVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP--QKN 293
N +I Y K+ L+ A +LF+ + E D + T+V+G+ +GD+ A +F + P ++
Sbjct: 53 NRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRD 112
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQ--Q 351
+ + AM+TG+ + A+ +F K++ + KP+ TF +VL + L +E Q Q
Sbjct: 113 TVMYNAMITGFSHNNDGYSAINLFCKMKHE-GFKPDNFTFASVLAGLA-LVADDEKQCVQ 170
Query: 352 IHQLISKTAFQESTYVVSALINMYSKCGE----LHIARRIFD------------------ 389
H K+ T V +AL+++YSKC LH AR++FD
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYV 230
Query: 390 ------------EGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
EG+ L+++N MI+ Y + G+ +EA+ + +M G + ++ TY
Sbjct: 231 KNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYP 290
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGV 497
++ AC+ AGL++ G Q +L+ D+ LV L + G+ EA I E +
Sbjct: 291 SVIRACATAGLLQLGKQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPA 348
Query: 498 DLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANV 557
L W LL+G G+ KL+ K +++ +N ++ ++ + A G +E +
Sbjct: 349 K-DLVSWNALLSGYVSSGHIGEAKLIFK---EMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 558 RMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQ 593
MK +G + C + G V+G + Q
Sbjct: 405 FSCMKREGFEP---CDYAFSGAIKSCAVLGAYCNGQ 437
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 192/559 (34%), Positives = 310/559 (55%), Gaps = 17/559 (3%)
Query: 66 KLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIE 125
+L + P+ + L G +++ Y ++ D + L+ Y L +
Sbjct: 32 ELDQKSPQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVA 91
Query: 126 EAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALS 181
A ++F E+PERNV N MI Y NG + + +F M NV ++ ++KA S
Sbjct: 92 SARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACS 151
Query: 182 ECGRIEDAQWHFNQMRERDVKSWTTMVDGLAI----NGRVDDARELFDRMPVRNVVSWNV 237
G I + + + S + +GL G + +AR + D M R+VVSWN
Sbjct: 152 CSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNS 211
Query: 238 MIKGYAKNRRLDEALELFERMPE----RDMPSWNTLVTGFIQNGDLN--RAEKLFHEMPQ 291
++ GYA+N+R D+ALE+ M D + +L+ N + +F +M +
Sbjct: 212 LVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGK 271
Query: 292 KNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ 351
K++++W M+ Y+++ + EA++++++++AD +P+ + +VL AC D + L+ G++
Sbjct: 272 KSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSALSLGKK 330
Query: 352 IHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHH 411
IH I + + + +ALI+MY+KCG L AR +F+ ++ RD++SW MI+AY
Sbjct: 331 IHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFEN--MKSRDVVSWTAMISAYGFS 388
Query: 412 GYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH 471
G G +A+ LF+K+Q+ G + + +V L ACSHAGL+EEG F + + I R +H
Sbjct: 389 GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEH 448
Query: 472 YACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIE 531
AC+VDL GRAG++KEA+ I+ + ++ + VWG LL C VH + DIG L A K+ ++
Sbjct: 449 LACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLA 508
Query: 532 PENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSH 591
PE +G Y LLSN+YA G+W+E N+R MK KGLKK PG S VEV + F+VGD+SH
Sbjct: 509 PEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSH 568
Query: 592 SQSELLGYLLLDLHTKMKK 610
QS+ + L L KMK+
Sbjct: 569 PQSDEIYRELDVLVKKMKE 587
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 134/552 (24%), Positives = 220/552 (39%), Gaps = 149/552 (26%)
Query: 24 IINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGR-----IDDARKLFDRMPERDLHL 78
+++ YP +RT+ T S + CN+S+ + ARK+FD +PER++ +
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVII 107
Query: 79 WGTMINGYIMCGVIKEARKLFD---GPDAMKDVVTW------------------------ 111
MI Y+ G E K+F G + D T+
Sbjct: 108 INVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSAT 167
Query: 112 -----------TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALD 160
LV+ Y K + EA + EM R+V SWN+++ GYA+N + + AL+
Sbjct: 168 KVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALE 227
Query: 161 LFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLA--INGRVD 218
+ R M + D + +++ ++ V
Sbjct: 228 VCREMESVKI---------------------------SHDAGTMASLLPAVSNTTTENVM 260
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ERD-------MPSW- 266
+++F +M +++VSWNVMI Y KN EA+EL+ RM E D +P+
Sbjct: 261 YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACG 320
Query: 267 ---------------------------NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTA 299
N L+ + + G L +A +F M ++V++WTA
Sbjct: 321 DTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTA 380
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
M++ Y G +A+ +F+KLQ D L P++ FVT L ACS L EG+ +L++
Sbjct: 381 MISAYGFSGRGCDAVALFSKLQ-DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTD- 438
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAIN 419
I R+ E L DL+ G + KEA
Sbjct: 439 --------------------HYKITPRL--EHLACMVDLLGRAGKV---------KEA-- 465
Query: 420 LFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLC 479
+ +Q++ + N+ + LL AC + GL DKL + Q +Y L ++
Sbjct: 466 -YRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQ--SGYYVLLSNIY 522
Query: 480 GRAGRLKEAFNI 491
+AGR +E NI
Sbjct: 523 AKAGRWEEVTNI 534
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 341 bits (875), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 208/612 (33%), Positives = 317/612 (51%), Gaps = 86/612 (14%)
Query: 64 ARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQ 123
ARKLFD MP R W T+++ Y G + + FD +D V+WT ++ GY + Q
Sbjct: 68 ARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL-PQRDSVSWTTMIVGYKNIGQ 126
Query: 124 IEEAERLFYEMPER---------------------------------------NVRSWNT 144
+A R+ +M + NV N+
Sbjct: 127 YHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNS 186
Query: 145 MIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSW 204
+++ YA+ G A +F RM R++ SWN +I + G+++ A F QM ERD+ +W
Sbjct: 187 LLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTW 246
Query: 205 TTMVDGLAINGRVDDARELF-----------DRMPVRNVVS------------------- 234
+M+ G G A ++F DR + +V+S
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 235 ----------WNVMIKGYAKNRRLDEALELFERMPERDMP--SWNTLVTGFIQNGDLNRA 282
N +I Y++ ++ A L E+ +D+ + L+ G+I+ GD+N+A
Sbjct: 307 TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQA 366
Query: 283 EKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
+ +F + ++V+ WTAM+ GY QHG EA+ +F + +PN+ T +L S
Sbjct: 367 KNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG-GQRPNSYTLAAMLSVASS 425
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR-QRDLISW 401
LA L+ G+QIH K+ S V +ALI MY+K G + A R FD L+R +RD +SW
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFD--LIRCERDTVSW 483
Query: 402 NGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLK 461
MI A A HG+ +EA+ LF M G + + +TYV + +AC+HAGLV +G QYFD +
Sbjct: 484 TSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKD 543
Query: 462 NRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGK 521
I HYAC+VDL GRAG L+EA IE + ++ + WG LL+ C VH N D+GK
Sbjct: 544 VDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGK 603
Query: 522 LVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTV 581
+ A+++L +EPEN+G YS L+N+Y++ GKW+EAA +R MKD +KK+ G SW+EV + V
Sbjct: 604 VAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKV 663
Query: 582 QVFVVGDKSHSQ 593
VF V D +H +
Sbjct: 664 HVFGVEDGTHPE 675
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 134/471 (28%), Positives = 219/471 (46%), Gaps = 48/471 (10%)
Query: 87 IMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMI 146
+ C VIK M V L+N Y K A +LF EMP R SWNT++
Sbjct: 36 VHCRVIKSG--------LMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVL 87
Query: 147 DGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK---- 202
Y++ G + + F ++P+R+ VSW T+I G+ A M + ++
Sbjct: 88 SAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQF 147
Query: 203 SWTTMVDGLAINGRVDDARELFD---RMPVR-NVVSWNVMIKGYAKNRRLDEALELFERM 258
+ T ++ +A ++ +++ ++ +R NV N ++ YAK A +F+RM
Sbjct: 148 TLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRM 207
Query: 259 PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFN 318
RD+ SWN ++ +Q G ++ A F +M +++++TW +M++G+ Q G AL IF+
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFS 267
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
K+ D L P+ T +VL AC++L L G+QIH I T F S V++ALI+MYS+C
Sbjct: 268 KMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 379 GELHIARRIFD---------EGL----------------------LRQRDLISWNGMIAA 407
G + ARR+ + EG L+ RD+++W MI
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 408 YAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQV 467
Y HG EAINLF M G + N T +L+ S + G Q +K+ I
Sbjct: 388 YEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS 447
Query: 468 REDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD 518
A L+ + +AG + A + + + W ++ HG+A+
Sbjct: 448 VSVSNA-LITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 37/171 (21%)
Query: 328 PNTGTFVTVLGACSDLA--------GLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
P + T+L C++L G Q +H + K+ S Y+++ L+N+YSK G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 380 ELHIARRIFDEGLLR-----------------------------QRDLISWNGMIAAYAH 410
AR++FDE LR QRD +SW MI Y +
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 411 HGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLK 461
G +AI + M + G + T +L + + +E G + ++K
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVK 174
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 335 bits (859), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 206/665 (30%), Positives = 334/665 (50%), Gaps = 97/665 (14%)
Query: 28 YPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYI 87
+ FL +S TS + + MK N D RK+FD M ER++ W T+I+GY
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSN-----------FKDGRKVFDEMKERNVVTWTTLISGYA 170
Query: 88 MCGVIKEARKLF-------DGPDAM-------------------------------KDVV 109
+ E LF P++ K +
Sbjct: 171 RNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIP 230
Query: 110 TWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERN 169
+L+N Y+K + +A LF + ++V +WN+MI GYA NG +AL +F M
Sbjct: 231 VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNY 290
Query: 170 V-VSWNTIIKALSECGRIED----AQWHFNQMRER---DVKSWTTMVDGLAINGRVDDAR 221
V +S ++ + C +++ Q H + ++ D T ++ + + DA
Sbjct: 291 VRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDAL 350
Query: 222 ELFDRMP-VRNVVSWNVMIKGYAKNRRLDEALELFERMP--------------------- 259
LF + V NVVSW MI G+ +N +EA++LF M
Sbjct: 351 RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVI 410
Query: 260 --------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYV 305
ER L+ +++ G + A K+F + K+++ W+AM+ GY
Sbjct: 411 SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYA 470
Query: 306 QHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL-AGLNEGQQIHQLISKTAFQES 364
Q G +E A+K+F +L +KPN TF ++L C+ A + +G+Q H K+ S
Sbjct: 471 QTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSS 529
Query: 365 TYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM 424
V SAL+ MY+K G + A +F R++DL+SWN MI+ YA HG +A+++F +M
Sbjct: 530 LCVSSALLTMYAKKGNIESAEEVFKRQ--REKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Query: 425 QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGR 484
++ + + VT++ + AC+HAGLVEEG +YFD ++++ I ++H +C+VDL RAG+
Sbjct: 588 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 647
Query: 485 LKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNM 544
L++A +IE + ++W +LA C VH ++G+L A+KI+ ++PE++ Y LLSNM
Sbjct: 648 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 707
Query: 545 YASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDL 604
YA G W+E A VR M ++ +KK+PG SW+EV N F+ GD+SH + + L DL
Sbjct: 708 YAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDL 767
Query: 605 HTKMK 609
T++K
Sbjct: 768 STRLK 772
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/567 (25%), Positives = 263/567 (46%), Gaps = 108/567 (19%)
Query: 60 RIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAM-------------- 105
R+ +A LFD+ P RD + +++ G+ G +EA++LF +
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 106 ------------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS 141
DV T+LV+ Y+K + ++ ++F EM ERNV +
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 142 WNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKALSECG-RIEDAQWHFNQM 196
W T+I GYARN ++ L LF RM + N ++ + L+E G Q H +
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVV 221
Query: 197 R---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALE 253
+ ++ + ++++ G V AR LFD+ V++VV+WN MI GYA N EAL
Sbjct: 222 KNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALG 281
Query: 254 LFE-------RMPERDMPSWNTLVT------------------GFIQNGDLNR------- 281
+F R+ E S L GF+ + ++
Sbjct: 282 MFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYS 341
Query: 282 -------AEKLFHEMP-QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
A +LF E+ NV++WTAM++G++Q+ EEA+ +F++++ ++PN T+
Sbjct: 342 KCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK-RKGVRPNEFTY 400
Query: 334 VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLL 393
+L A ++ ++H + KT ++ S+ V +AL++ Y K G++ A ++F +
Sbjct: 401 SVILTALPVIS----PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG--I 454
Query: 394 RQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGL-VEEG 452
+D+++W+ M+A YA G + AI +F ++ + G + N+ T+ +L C+ + +G
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG 514
Query: 453 LQYFDKLLKNRSIQVREDHYAC----LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLL 508
Q+ +I+ R D C L+ + + G ++ A + + + L W ++
Sbjct: 515 KQF-----HGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFK-RQREKDLVSWNSMI 568
Query: 509 AGCNVHGNA----DIGKLVAKKILKIE 531
+G HG A D+ K + K+ +K++
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKMD 595
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 332 bits (851), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 193/610 (31%), Positives = 315/610 (51%), Gaps = 81/610 (13%)
Query: 22 TFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGT 81
+ +I+G + R+ S + + + CN +SR RID+AR++F+++P + L+
Sbjct: 18 SHVIHGKCY-RSFSVTVEFQNREVLICNHLLSR-----RIDEAREVFNQVPSPHVSLY-- 69
Query: 82 MINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS 141
T ++ GY + N++ +A LF EMP R+V S
Sbjct: 70 ------------------------------TKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 142 WNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDV 201
WN+MI G G A+ LF MPER+VVSW ++ G+++ A+ F QM +D
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDT 159
Query: 202 KSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE- 260
+W +MV G G+VDDA +LF +MP +NV+SW MI G +N R EAL+LF+ M
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRC 219
Query: 261 ----------------RDMPSWN----------------------TLVTGFIQNGDLNRA 282
+ P+++ +L+T + + +
Sbjct: 220 CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDS 279
Query: 283 EKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
K+F E + V WTA+++GY + E+AL IF+ + + L PN TF + L +CS
Sbjct: 280 RKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL-PNQSTFASGLNSCSA 338
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWN 402
L L+ G+++H + K + +V ++L+ MYS G ++ A +F + + ++ ++SWN
Sbjct: 339 LGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK--IFKKSIVSWN 396
Query: 403 GMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKN 462
+I A HG GK A +F +M L + +++T+ LL+ACSH G +E+G + F +
Sbjct: 397 SIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSG 456
Query: 463 -RSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGK 521
I + HY C+VD+ GR G+LKEA +IE + V + VW LL+ C +H + D G+
Sbjct: 457 INHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGE 516
Query: 522 LVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTV 581
A I ++ +++ Y LLSN+YAS G+W + +R+KMK G+ K+PG SWV +
Sbjct: 517 KAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKK 576
Query: 582 QVFVVGDKSH 591
F GD+ H
Sbjct: 577 HEFFSGDQPH 586
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 330 bits (846), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 203/636 (31%), Positives = 329/636 (51%), Gaps = 97/636 (15%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA-----RKLFDGPDA----------- 104
++DA +LFD M + D LW MI G+ CG+ EA R +F G A
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 105 ----------------------MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSW 142
+ DV +L++ Y+KL +AE++F EMPER++ SW
Sbjct: 140 VAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSW 199
Query: 143 NTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSECGRIEDAQW----H 192
N+MI GY G +L LF+ M P+R + + AL C + + H
Sbjct: 200 NSMISGYLALGDGFSSLMLFKEMLKCGFKPDRF-----STMSALGACSHVYSPKMGKEIH 254
Query: 193 FNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRL 248
+ +R R DV T+++D + G V A +F+ M RN+V+WNVMI YA+N R+
Sbjct: 255 CHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRV 314
Query: 249 DEALELFERMPERD------MPSWNTLVT----------------GFI------------ 274
+A F++M E++ + S N L GF+
Sbjct: 315 TDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 275 --QNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+ G L AE +F M +KNVI+W +++ YVQ+G + AL++F +L D +L P++ T
Sbjct: 375 YGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELW-DSSLVPDSTT 433
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
++L A ++ L+EG++IH I K+ + +T ++++L++MY+ CG+L AR+ F+ L
Sbjct: 434 IASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHIL 493
Query: 393 LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
L+ D++SWN +I AYA HG+G+ ++ LF++M N T+ LL ACS +G+V+EG
Sbjct: 494 LK--DVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEG 551
Query: 453 LQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN 512
+YF+ + + I +HY C++DL GR G A +E + + +WG LL
Sbjct: 552 WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASR 611
Query: 513 VHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 572
H + I + A++I K+E +N G Y LL NMYA G+W++ +++ M+ KG+ +
Sbjct: 612 NHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSR 671
Query: 573 SWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKM 608
S VE VF GD+SH + + Y +LD+ ++M
Sbjct: 672 STVEAKGKSHVFTNGDRSHVATNKI-YEVLDVVSRM 706
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 188/427 (44%), Gaps = 85/427 (19%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCG-------VIKEARKLFD 100
CN+ IS + G DA K+F+ MPERD+ W +MI+GY+ G + KE K
Sbjct: 168 CNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGF 227
Query: 101 GPDAMK--------------------------------DVVTWTALVNGYVKLNQIEEAE 128
PD DV+ T++++ Y K ++ AE
Sbjct: 228 KPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAE 287
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTI--IKALSECGRI 186
R+F M +RN+ +WN MI YARNG+ A F++M E+N + + I I L +
Sbjct: 288 RIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL 347
Query: 187 EDAQWHFNQMRERDVKSW---TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
E H MR + T ++D G++ A +FDRM +NV+SWN +I Y
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYV 407
Query: 244 KNRRLDEALELFERM------PERD-----MPSW-------------------------- 266
+N + ALELF+ + P+ +P++
Sbjct: 408 QNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTI 467
Query: 267 --NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
N+LV + GDL A K F+ + K+V++W +++ Y HG ++ +F+++ A
Sbjct: 468 ILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASR 527
Query: 325 ALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT-AFQESTYVVSALINMYSKCGELHI 383
+ PN TF ++L ACS ++EG + + + + ++++ + G
Sbjct: 528 -VNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSA 586
Query: 384 ARRIFDE 390
A+R +E
Sbjct: 587 AKRFLEE 593
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 222/483 (45%), Gaps = 62/483 (12%)
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PE 167
T + G+ +E+A +LF EM + + WN MI G+ G +A+ + RM +
Sbjct: 68 TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVK 127
Query: 168 RNVVSWNTIIKALSECGRIEDA-QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDAREL 223
+ ++ +IK+++ +E+ + H ++ DV +++ G DA ++
Sbjct: 128 ADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKV 187
Query: 224 FDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM------PER---------------- 261
F+ MP R++VSWN MI GY +L LF+ M P+R
Sbjct: 188 FEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSP 247
Query: 262 ------------------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG 303
D+ +++ + + G+++ AE++F+ M Q+N++ W M+
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 304 YVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQE 363
Y ++G +A F K+ + L+P+ T + +L A + L EG+ IH + F
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLP 363
Query: 364 STYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNK 423
+ +ALI+MY +CG+L A IFD + ++++ISWN +IAAY +G A+ LF +
Sbjct: 364 HMVLETALIDMYGECGQLKSAEVIFDR--MAEKNVISWNSIIAAYVQNGKNYSALELFQE 421
Query: 424 MQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR--SIQVREDHYACLVDLCGR 481
+ + + T +L A + + + EG + ++K+R S + + + +CG
Sbjct: 422 LWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGD 481
Query: 482 AGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL--KIEPENAGTYS 539
++ FN I + + W ++ VHG I + +++ ++ P + S
Sbjct: 482 LEDARKCFNHI----LLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFAS 537
Query: 540 LLS 542
LL+
Sbjct: 538 LLA 540
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 182/362 (50%), Gaps = 21/362 (5%)
Query: 160 DLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDD 219
D ++ + N + ++ ++ +EDA F++M + D W M+ G G +
Sbjct: 54 DRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIE 113
Query: 220 ARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPE----RDMPSWNTLVT 271
A + + RM V ++ +IK A L+E ++ + + D+ N+L++
Sbjct: 114 AVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLIS 173
Query: 272 GFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
+++ G AEK+F EMP++++++W +M++GY+ G +L +F ++ KP+
Sbjct: 174 LYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEM-LKCGFKPDRF 232
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQES-TYVVSALINMYSKCGELHIARRIFDE 390
+ ++ LGACS + G++IH ++ + V++++++MYSK GE+ A RIF+
Sbjct: 233 STMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFN- 291
Query: 391 GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL-GFQANDVTYVELLTACS-HAGL 448
G++ QR++++WN MI YA +G +A F KM E G Q + +T + LL A + G
Sbjct: 292 GMI-QRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGR 350
Query: 449 VEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLL 508
G L + ++ L+D+ G G+LK A I + + +S W ++
Sbjct: 351 TIHGYAMRRGFLPHMVLET------ALIDMYGECGQLKSAEVIFDRMAEKNVIS-WNSII 403
Query: 509 AG 510
A
Sbjct: 404 AA 405
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 169/376 (44%), Gaps = 63/376 (16%)
Query: 264 PSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
P+ + GF + + A +LF EM + + W M+ G+ GL EA++ ++++
Sbjct: 65 PALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRM-VF 123
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+K +T T+ V+ + + ++ L EG++IH ++ K F YV ++LI++Y K G
Sbjct: 124 AGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWD 183
Query: 384 ARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
A ++F+E + +RD++SWN MI+ Y G G ++ LF +M + GF+ + + + L AC
Sbjct: 184 AEKVFEE--MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGAC 241
Query: 444 SHA---------------GLVEEG-----------------LQYFDKLLKNRSIQVREDH 471
SH +E G + Y +++ N IQ
Sbjct: 242 SHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIF-NGMIQRNIVA 300
Query: 472 YACLVDLCGRAGRLKEAFNIIE------GLGVDLSLSV----WGPLLAGCNVHGNADIGK 521
+ ++ R GR+ +AF + GL D+ S+ +L G +HG A
Sbjct: 301 WNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRG 360
Query: 522 LVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTV 581
+ +L+ + L +MY G+ K A + +M +K + SW + +
Sbjct: 361 FLPHMVLE---------TALIDMYGECGQLKSAEVIFDRMAEKNV-----ISW---NSII 403
Query: 582 QVFVVGDKSHSQSELL 597
+V K++S EL
Sbjct: 404 AAYVQNGKNYSALELF 419
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 327 bits (837), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/447 (37%), Positives = 270/447 (60%), Gaps = 5/447 (1%)
Query: 143 NTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFN--QMRERD 200
N +I Y + G + +F RMP+R+ VS+N++I +CG I A+ F+ M ++
Sbjct: 160 NCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKN 219
Query: 201 VKSWTTMVDGLA-INGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP 259
+ SW +M+ G A + VD A +LF MP ++++SWN MI GY K+ R+++A LF+ MP
Sbjct: 220 LISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMP 279
Query: 260 ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
RD+ +W T++ G+ + G ++ A+ LF +MP ++V+ + +MM GYVQ+ EAL+IF+
Sbjct: 280 RRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSD 339
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
++ + L P+ T V VL A + L L++ +H I + F + ALI+MYSKCG
Sbjct: 340 MEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCG 399
Query: 380 ELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
+ A +F EG+ + + WN MI A HG G+ A ++ +++ L + +D+T+V +
Sbjct: 400 SIQHAMLVF-EGI-ENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGV 457
Query: 440 LTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDL 499
L ACSH+GLV+EGL F+ + + I+ R HY C+VD+ R+G ++ A N+IE + V+
Sbjct: 458 LNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEP 517
Query: 500 SLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRM 559
+ +W L C+ H + G+LVAK ++ N +Y LLSNMYAS G WK+ VR
Sbjct: 518 NDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRT 577
Query: 560 KMKDKGLKKQPGCSWVEVGNTVQVFVV 586
MK++ ++K PGCSW+E+ V F V
Sbjct: 578 MMKERKIEKIPGCSWIELDGRVHEFFV 604
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/379 (30%), Positives = 210/379 (55%), Gaps = 16/379 (4%)
Query: 45 MKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-GPD 103
+++C + C G + +R++FDRMP+RD + +MI+GY+ CG+I AR+LFD P
Sbjct: 158 LQNCLIGLYLKC--GCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPM 215
Query: 104 AMKDVVTWTALVNGYVKLNQ-IEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLF 162
MK++++W ++++GY + + ++ A +LF +MPE+++ SWN+MIDGY ++G+ E A LF
Sbjct: 216 EMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLF 275
Query: 163 RRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARE 222
MP R+VV+W T+I ++ G + A+ F+QM RDV ++ +M+ G N +A E
Sbjct: 276 DVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALE 335
Query: 223 LFDRMP-----VRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFI--- 274
+F M + + + +++ A+ RL +A+++ + E+ L I
Sbjct: 336 IFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMY 395
Query: 275 -QNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
+ G + A +F + K++ W AM+ G HGL E A + +++ +LKP+ TF
Sbjct: 396 SKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIER-LSLKPDDITF 454
Query: 334 VTVLGACSDLAGLNEGQQIHQLI-SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
V VL ACS + EG +L+ K + ++++ S+ G + +A+ + +E
Sbjct: 455 VGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMP 514
Query: 393 LRQRDLISWNGMIAAYAHH 411
+ D+I W + A +HH
Sbjct: 515 VEPNDVI-WRTFLTACSHH 532
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
W A++ + HG + L ++ + + + VL ACS L + G QIH +
Sbjct: 89 WNAVIKSH-SHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
KT ++ + LI +Y KCG L ++R++FD + +RD +S+N MI Y G
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDR--MPKRDSVSYNSMIDGYVKCGLIVS 205
Query: 417 AINLFNKM 424
A LF+ M
Sbjct: 206 ARELFDLM 213
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 326 bits (835), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 201/642 (31%), Positives = 329/642 (51%), Gaps = 95/642 (14%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DGPDAMKDVVTWTA 113
G + A LFD MP+RD W TMI+GY CG +++A LF G D D +++
Sbjct: 49 GFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDV--DGYSFSR 106
Query: 114 LVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERN 169
L+ G + + + E++ + E NV ++++D YA+ + E A + F+ + E N
Sbjct: 107 LLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPN 166
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMR-------------------------------- 197
VSWN +I + I+ A W M
Sbjct: 167 SVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVH 226
Query: 198 --------ERDVKSWTTMVDGLAINGRVDDARELFDRMP-VRNVVSWNVMIKGYAKNRRL 248
+ ++ M+ A G V DA+ +FD + ++++SWN MI G++K+
Sbjct: 227 AKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELK 286
Query: 249 DEALELFERMP----ERDMPSW-----------------------------------NTL 269
+ A ELF +M E D+ ++ N L
Sbjct: 287 ESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNAL 346
Query: 270 VTGFIQ--NGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
++ +IQ G + A LF + K++I+W +++TG+ Q GLSE+A+K F+ L++ +K
Sbjct: 347 ISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSE-IK 405
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
+ F +L +CSDLA L GQQIH L +K+ F + +V+S+LI MYSKCG + AR+
Sbjct: 406 VDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKC 465
Query: 388 FDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAG 447
F + + + ++WN MI YA HG G+ +++LF++M + + VT+ +LTACSH G
Sbjct: 466 FQQ-ISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTG 524
Query: 448 LVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPL 507
L++EGL+ + + IQ R +HYA VDL GRAG + +A +IE + ++ V
Sbjct: 525 LIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTF 584
Query: 508 LAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
L C G ++ VA +L+IEPE+ TY LS+MY+ + KW+E A+V+ MK++G+K
Sbjct: 585 LGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVK 644
Query: 568 KQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
K PG SW+E+ N V+ F D+S+ + + ++ DL +M+
Sbjct: 645 KVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEMQ 686
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 113/463 (24%), Positives = 212/463 (45%), Gaps = 55/463 (11%)
Query: 104 AMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLF- 162
++ D+ +++ Y+K + A LF EMP+R+ SWNTMI GY G+ E A LF
Sbjct: 31 SISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFT 90
Query: 163 ---RRMPERNVVSWNTIIKALSECGRIE-DAQWHFNQMR---ERDVKSWTTMVDGLAING 215
R + + S++ ++K ++ R + Q H ++ E +V +++VD A
Sbjct: 91 CMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCE 150
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP---------------- 259
RV+DA E F + N VSWN +I G+ + R + A L M
Sbjct: 151 RVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLL 210
Query: 260 ------------------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEM-PQKNV 294
+ ++ N +++ + G ++ A+++F + K++
Sbjct: 211 TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDL 270
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
I+W +M+ G+ +H L E A ++F ++Q H ++ + T+ +L ACS G+ +H
Sbjct: 271 ISWNSMIAGFSKHELKESAFELFIQMQR-HWVETDIYTYTGLLSACSGEEHQIFGKSLHG 329
Query: 355 LISKTAFQESTYVVSALINMYSK--CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
++ K ++ T +ALI+MY + G + A +F+ L+ +DLISWN +I +A G
Sbjct: 330 MVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFES--LKSKDLISWNSIITGFAQKG 387
Query: 413 YGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
++A+ F+ ++ + +D + LL +CS ++ G Q L E
Sbjct: 388 LSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG-QQIHALATKSGFVSNEFVI 446
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
+ L+ + + G ++ A + + S W ++ G HG
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 165/373 (44%), Gaps = 46/373 (12%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRM-PERDLHLWGTMINGYIMCGVIKEARKLFDGPD--- 103
CN IS G + DA+++FD + +DL W +MI G+ + + A +LF
Sbjct: 241 CNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW 300
Query: 104 AMKDVVTWTALVNGYVKLNQIEEAERLFYEM---------PERNVRSWNTMIDGYAR--N 152
D+ T+T L++ E ++F + E+ + N +I Y +
Sbjct: 301 VETDIYTYTGLLSACSG-----EEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPT 355
Query: 153 GQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLA 212
G E AL LF + ++++SWN+II ++ G EDA F+ +R ++K VD A
Sbjct: 356 GTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIK-----VDDYA 410
Query: 213 INGRVDDARELFDRMP-------------VRNVVSWNVMIKGYAKNRRLDEALELFERMP 259
+ + +L V N + +I Y+K ++ A + F+++
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 260 ER-DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEAL 314
+ +WN ++ G+ Q+G + LF +M +NV +T+TA++T GL +E L
Sbjct: 471 SKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGL 530
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
++ N ++ + ++P + + +N+ + +LI V+ + +
Sbjct: 531 ELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK---ELIESMPLNPDPMVLKTFLGV 587
Query: 375 YSKCGELHIARRI 387
CGE+ +A ++
Sbjct: 588 CRACGEIEMATQV 600
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 325 bits (833), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 158/424 (37%), Positives = 250/424 (58%), Gaps = 3/424 (0%)
Query: 184 GRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
G I A F +M E++V WT+M++G +N + AR FD P R++V WN MI GY
Sbjct: 42 GVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYI 101
Query: 244 KNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG 303
+ + EA LF++MP RD+ SWNT++ G+ GD+ E++F +MP++NV +W ++ G
Sbjct: 102 EMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKG 161
Query: 304 YVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQE 363
Y Q+G E L F ++ + ++ PN T VL AC+ L + G+ +H+ + +
Sbjct: 162 YAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNK 221
Query: 364 -STYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
V +ALI+MY KCG + IA +F +++RDLISWN MI A HG+G EA+NLF+
Sbjct: 222 VDVNVKNALIDMYGKCGAIEIAMEVFKG--IKRRDLISWNTMINGLAAHGHGTEALNLFH 279
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRA 482
+M+ G + VT+V +L AC H GLVE+GL YF+ + + SI +H C+VDL RA
Sbjct: 280 EMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRA 339
Query: 483 GRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLS 542
G L +A I + V +W LL V+ DIG++ ++++K+EP N + +LS
Sbjct: 340 GFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
Query: 543 NMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLL 602
N+Y G++ +AA +++ M+D G KK+ G SW+E + + F + H ++E L +L
Sbjct: 400 NIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSSGEKHPRTEELQRILR 459
Query: 603 DLHT 606
+L +
Sbjct: 460 ELKS 463
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 217/449 (48%), Gaps = 44/449 (9%)
Query: 55 LCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-GPDAMKDVVTWTA 113
LC G I A K+F M E+++ LW +MINGY++ + AR+ FD P+ +D+V W
Sbjct: 38 LCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDLSPE--RDIVLWNT 95
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSW 173
+++GY+++ + EA LF +MP R+V SWNT+++GYA G E +F MPERNV SW
Sbjct: 96 MISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSW 155
Query: 174 NTIIKALSECGRIEDAQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDAREL--FDR 226
N +IK ++ GR+ + F +M + + + T ++ A G D + + +
Sbjct: 156 NGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGE 215
Query: 227 MPVRNVVSWNV---MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAE 283
N V NV +I Y K ++ A+E+F+ + RD+ SWNT++ G +G A
Sbjct: 216 TLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEAL 275
Query: 284 KLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP---NTGTFVTV 336
LFHEM + +T+ ++ GL E+ L FN + D ++ P + G V +
Sbjct: 276 NLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDL 335
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL-LRQ 395
L L Q + I+K + + + L+ ++ I +E + L
Sbjct: 336 LSRAGFLT------QAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEP 389
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN-DVTYVELLTACSHAGLVE---- 450
R+ ++ + Y G +A L M++ GF+ V+++E + GLV+
Sbjct: 390 RNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIE-----TDDGLVKFYSS 444
Query: 451 -------EGLQYFDKLLKNRSIQVREDHY 472
E LQ + LK+ +I E+H+
Sbjct: 445 GEKHPRTEELQRILRELKSFNILRDEEHF 473
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/440 (27%), Positives = 197/440 (44%), Gaps = 81/440 (18%)
Query: 91 VIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYA 150
++ E+R+L + + L + I A ++F EM E+NV W +MI+GY
Sbjct: 11 LVAESRELITHAKCSTESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYL 70
Query: 151 RNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDG 210
N A F PER++V WNT+I E G + +A+ F+QM RDV SW T+++G
Sbjct: 71 LNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEG 130
Query: 211 LAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER--------- 261
A G ++ +FD MP RNV SWN +IKGYA+N R+ E L F+RM +
Sbjct: 131 YANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDAT 190
Query: 262 --------------DMPSW------------------NTLVTGFIQNGDLNRAEKLFHEM 289
D W N L+ + + G + A ++F +
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
Query: 290 PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG 349
++++I+W M+ G HG EAL +F++++ + + P+ TFV VL AC + + +G
Sbjct: 251 KRRDLISWNTMINGLAAHGHGTEALNLFHEMK-NSGISPDKVTFVGVLCACKHMGLVEDG 309
Query: 350 QQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYA 409
A+ S + +++ CG + DL+S
Sbjct: 310 ---------LAYFNSMFTDFSIMPEIEHCGCV--------------VDLLS--------- 337
Query: 410 HHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRE 469
G+ +A+ NKM +A+ V + LL A V+ G ++L+K ++ R
Sbjct: 338 RAGFLTQAVEFINKMP---VKADAVIWATLLGASKVYKKVDIGEVALEELIK---LEPRN 391
Query: 470 D-HYACLVDLCGRAGRLKEA 488
++ L ++ G AGR +A
Sbjct: 392 PANFVMLSNIYGDAGRFDDA 411
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 167/422 (39%), Gaps = 97/422 (22%)
Query: 22 TFIINGYPFLRTMSTSTSSLH-SAMKDC---NTSISRLCQEGRIDDARKLFDRMPERDLH 77
T +INGY + + ++ S +D NT IS + G + +AR LFD+MP RD+
Sbjct: 63 TSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVM 122
Query: 78 LWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNGYVKLNQIEE---------- 126
W T++ GY G ++ ++FD P+ ++V +W L+ GY + ++ E
Sbjct: 123 SWNTVLEGYANIGDMEACERVFDDMPE--RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVD 180
Query: 127 ---------------------------------AERLFYEMPERNVRSWNTMIDGYARNG 153
E L Y + NV+ N +ID Y + G
Sbjct: 181 EGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVK--NALIDMYGKCG 238
Query: 154 QTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAI 213
E A+++F+ + R+++SWNT+I L+ G +A F++M+ + G+
Sbjct: 239 AIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLC 298
Query: 214 N----GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTL 269
G V+D F+ M F MPE + +
Sbjct: 299 ACKHMGLVEDGLAYFNSM------------------------FTDFSIMPE--IEHCGCV 332
Query: 270 VTGFIQNGDLNRAEKLFHEMPQK-NVITWTAMMTG---YVQHGLSEEALKIFNKLQADHA 325
V + G L +A + ++MP K + + W ++ Y + + E AL+ KL+
Sbjct: 333 VDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALEELIKLEP--- 389
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVV-----SALINMYSKCGE 380
N FV + D ++ ++ + T F++ V L+ YS GE
Sbjct: 390 --RNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFYSS-GE 446
Query: 381 LH 382
H
Sbjct: 447 KH 448
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 322 bits (825), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 295/534 (55%), Gaps = 55/534 (10%)
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV- 170
T L++ I A ++F ++P + WN +I GY+RN + AL ++ M V
Sbjct: 57 TKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVS 116
Query: 171 ---VSWNTIIKALS-----ECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARE 222
++ ++KA S + GR AQ F + DV ++ A R+ AR
Sbjct: 117 PDSFTFPHLLKACSGLSHLQMGRFVHAQV-FRLGFDADVFVQNGLIALYAKCRRLGSART 175
Query: 223 LFDRMPV--RNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNTLV--------- 270
+F+ +P+ R +VSW ++ YA+N EALE+F +M + D+ P W LV
Sbjct: 176 VFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCL 235
Query: 271 -----------------------------TGFIQNGDLNRAEKLFHEMPQKNVITWTAMM 301
T + + G + A+ LF +M N+I W AM+
Sbjct: 236 QDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMI 295
Query: 302 TGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAF 361
+GY ++G + EA+ +F+++ + ++P+T + + + AC+ + L + + +++ + ++ +
Sbjct: 296 SGYAKNGYAREAIDMFHEM-INKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDY 354
Query: 362 QESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLF 421
++ ++ SALI+M++KCG + AR +FD L RD++ W+ MI Y HG +EAI+L+
Sbjct: 355 RDDVFISSALIDMFAKCGSVEGARLVFDRTL--DRDVVVWSAMIVGYGLHGRAREAISLY 412
Query: 422 NKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGR 481
M+ G NDVT++ LL AC+H+G+V EG +F+++ ++ I ++ HYAC++DL GR
Sbjct: 413 RAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHK-INPQQQHYACVIDLLGR 471
Query: 482 AGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLL 541
AG L +A+ +I+ + V ++VWG LL+ C H + ++G+ A+++ I+P N G Y L
Sbjct: 472 AGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQL 531
Query: 542 SNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
SN+YA+ W A VR++MK+KGL K GCSWVEV ++ F VGDKSH + E
Sbjct: 532 SNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYE 585
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 177/441 (40%), Gaps = 91/441 (20%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAM------ 105
G I AR++FD +P + W +I GY ++A ++ PD+
Sbjct: 67 GDITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 106 -------------------------KDVVTWTALVNGYVKLNQIEEAERLF--YEMPERN 138
DV L+ Y K ++ A +F +PER
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT 186
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSECGRIEDAQWHFNQMR 197
+ SW ++ YA+NG+ +AL++F +M + +V W ++ L+ ++D + +
Sbjct: 187 IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLK-QGRSIH 245
Query: 198 ERDVKSWTTMVDGLAIN--------GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLD 249
VK + L I+ G+V A+ LFD+M N++ WN MI GYAKN
Sbjct: 246 ASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAR 305
Query: 250 EALELFERMPERDM-PSW--------------------------------------NTLV 270
EA+++F M +D+ P + L+
Sbjct: 306 EAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALI 365
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNT 330
F + G + A +F ++V+ W+AM+ GY HG + EA+ ++ ++ + PN
Sbjct: 366 DMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERG-GVHPND 424
Query: 331 GTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDE 390
TF+ +L AC+ + EG ++ + +I++ + G L A + +
Sbjct: 425 VTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVI-K 483
Query: 391 GLLRQRDLISWNGMIAAYAHH 411
+ Q + W +++A H
Sbjct: 484 CMPVQPGVTVWGALLSACKKH 504
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 109/228 (47%), Gaps = 15/228 (6%)
Query: 350 QQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYA 409
+QIH + Q S ++++ LI+ S G++ AR++FD+ L + + WN +I Y+
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDD--LPRPQIFPWNAIIRGYS 95
Query: 410 HHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG----LQYFDKLLKNRSI 465
+ + ++A+ +++ MQ + T+ LL ACS ++ G Q F +L + +
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF-RLGFDADV 154
Query: 466 QVREDHYACLVDLCGRAGRLKEAFNIIEGLGV-DLSLSVWGPLLAGCNVHGNADIGKLVA 524
V+ L+ L + RL A + EGL + + ++ W +++ +G +
Sbjct: 155 FVQNG----LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 525 KKILK--IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQP 570
++ K ++P+ S+L N + + K+ ++ + GL+ +P
Sbjct: 211 SQMRKMDVKPDWVALVSVL-NAFTCLQDLKQGRSIHASVVKMGLEIEP 257
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 322 bits (824), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 192/619 (31%), Positives = 325/619 (52%), Gaps = 102/619 (16%)
Query: 87 IMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMI 146
+ CG A L G + +V ALV Y + + +A ++F EM +V SWN++I
Sbjct: 143 VRCGESAHALSLVTG--FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSII 200
Query: 147 DGYARNGQTEKALDLFRRM-------PE-------------------------------- 167
+ YA+ G+ + AL++F RM P+
Sbjct: 201 ESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEM 260
Query: 168 -RNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDR 226
+N+ N ++ ++CG +++A F+ M +DV SW MV G + GR +DA LF++
Sbjct: 261 IQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEK 320
Query: 227 MPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNTLVT--------GF 273
M +VV+W+ I GYA+ EAL + +M + P+ TL++ G
Sbjct: 321 MQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGA 380
Query: 274 IQNG------------DLNR-------------------------AEKLFHEMP--QKNV 294
+ +G DL + A +F + +++V
Sbjct: 381 LMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDV 440
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKL-QADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
+TWT M+ GY QHG + +AL++ +++ + D +PN T L AC+ LA L G+QIH
Sbjct: 441 VTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIH 500
Query: 354 QLISKTAFQEST---YVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAH 410
+ Q++ +V + LI+MY+KCG + AR +FD + ++ ++W ++ Y
Sbjct: 501 AYALRN--QQNAVPLFVSNCLIDMYAKCGSISDARLVFDN--MMAKNEVTWTSLMTGYGM 556
Query: 411 HGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRED 470
HGYG+EA+ +F++M+ +GF+ + VT + +L ACSH+G++++G++YF+++ + +
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 471 HYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKI 530
HYACLVDL GRAGRL A +IE + ++ VW L+ C +HG ++G+ A+KI ++
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITEL 676
Query: 531 EPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKS 590
+ G+Y+LLSN+YA+ G+WK+ +R M+ KG+KK+PGCSWVE F VGDK+
Sbjct: 677 ASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKT 736
Query: 591 HSQSELLGYLLLDLHTKMK 609
H ++ + +LLD ++K
Sbjct: 737 HPHAKEIYQVLLDHMQRIK 755
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 203/443 (45%), Gaps = 37/443 (8%)
Query: 38 TSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARK 97
TS + M N + + G +D+A +F M +D+ W M+ GY G ++A +
Sbjct: 257 TSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVR 316
Query: 98 LFDGPDAMK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYA 150
LF+ K DVVTW+A ++GY + EA + +M ++ + +++ G A
Sbjct: 317 LFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA 376
Query: 151 RNG-----------QTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQM--R 197
G + +DL + + N +I ++C +++ A+ F+ + +
Sbjct: 377 SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK 436
Query: 198 ERDVKSWTTMVDGLAINGRVDDARELFDRM--------PVRNVVSWNVMIKGYAKNRRLD 249
ERDV +WT M+ G + +G + A EL M P +S ++ R+
Sbjct: 437 ERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG 496
Query: 250 EALELFE-RMPERDMPSW--NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQ 306
+ + + R + +P + N L+ + + G ++ A +F M KN +TWT++MTGY
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 307 HGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTY 366
HG EEAL IF++++ K + T + VL ACS +++G + + KT F S
Sbjct: 557 HGYGEEALGIFDEMRRI-GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRM-KTVFGVSPG 614
Query: 367 V--VSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM 424
+ L+++ + G L+ A R+ +E + ++ W ++ HG + K+
Sbjct: 615 PEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVV-WVAFLSCCRIHGKVELGEYAAEKI 673
Query: 425 QELGFQANDVTYVELLTACSHAG 447
EL +D +Y L ++AG
Sbjct: 674 TELA-SNHDGSYTLLSNLYANAG 695
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 170/367 (46%), Gaps = 34/367 (9%)
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKN--VITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
L++ +I G L+ A L P + V W +++ Y +G + + L +F + H+L
Sbjct: 65 LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLM---HSL 121
Query: 327 K--PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIA 384
P+ TF V AC +++ + G+ H L T F + +V +AL+ MYS+C L A
Sbjct: 122 SWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDA 181
Query: 385 RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM-QELGFQANDVTYVELLTAC 443
R++FDE + D++SWN +I +YA G K A+ +F++M E G + +++T V +L C
Sbjct: 182 RKVFDE--MSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC 239
Query: 444 SHAGLVEEGLQYFDKLLKNRSIQVREDHYA--CLVDLCGRAGRLKEAFNIIEGLGVDLSL 501
+ G G Q + + IQ + + CLVD+ + G + EA + + V +
Sbjct: 240 ASLGTHSLGKQLHCFAVTSEMIQ---NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 502 SVWGPLLAGCNVHGN-ADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMK 560
S W ++AG + G D +L K + + T+S + YA G EA V +
Sbjct: 297 S-WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQ 355
Query: 561 MKDKGLKKQ--------PGCSWVEV---GNTVQVFVVG------DKSHSQSELLGYLLLD 603
M G+K GC+ V G + + + H ++ L+D
Sbjct: 356 MLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLID 415
Query: 604 LHTKMKK 610
++ K KK
Sbjct: 416 MYAKCKK 422
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 321 bits (823), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 186/540 (34%), Positives = 302/540 (55%), Gaps = 57/540 (10%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
DVV ++LV Y K N E + ++F EMPER+V SWNT+I + ++G+ EKAL+LF RM
Sbjct: 141 DVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRME 200
Query: 167 ----ERNVVSWNTIIKALSECGRI----EDAQWHFNQMR---ERDVKSWTTMVDGLAING 215
E N VS A+S C R+ + H ++ E D + +VD
Sbjct: 201 SSGFEPNSVSLTV---AISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCD 257
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP-ERDMPSWNTLVT--- 271
++ ARE+F +MP +++V+WN MIKGY +E+ RM E PS TL +
Sbjct: 258 CLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILM 317
Query: 272 ---------------GFI--------------------QNGDLNRAEKLFHEMPQKNVIT 296
G++ + G+ N AE +F + + +
Sbjct: 318 ACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAES 377
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
W M++ Y+ G +A+++++++ +KP+ TF +VL ACS LA L +G+QIH I
Sbjct: 378 WNVMISSYISVGNWFKAVEVYDQM-VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI 436
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
S++ + ++SAL++MYSKCG A RIF+ + ++D++SW MI+AY HG +E
Sbjct: 437 SESRLETDELLLSALLDMYSKCGNEKEAFRIFNS--IPKKDVVSWTVMISAYGSHGQPRE 494
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
A+ F++MQ+ G + + VT + +L+AC HAGL++EGL++F ++ I+ +HY+C++
Sbjct: 495 ALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMI 554
Query: 477 DLCGRAGRLKEAFNIIEGLG-VDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENA 535
D+ GRAGRL EA+ II+ + + L + C +H +G +A+ +++ P++A
Sbjct: 555 DILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLVENYPDDA 614
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
TY +L N+YAS W A VR+KMK+ GL+K+PGCSW+E+ + V F D+SH ++E
Sbjct: 615 STYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAE 674
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 225/524 (42%), Gaps = 125/524 (23%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPER-NVRSWNTMIDGYARNGQTEKALDLFRR 164
+DVV +L+N Y A +F R +V WN+++ GY++N L++F+R
Sbjct: 37 RDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKR 96
Query: 165 MPERNVV-----SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAI-NGRVD 218
+ ++ ++ +IKA GR + M+ L + +G V
Sbjct: 97 LLNCSICVPDSFTFPNVIKAYGALGR----------------EFLGRMIHTLVVKSGYVC 140
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGD 278
D VV + ++ YAK + +L++F+ MPERD+ SWNT+++ F Q+G+
Sbjct: 141 D------------VVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
+E+AL++F ++++ +PN+ + +
Sbjct: 189 -------------------------------AEKALELFGRMESS-GFEPNSVSLTVAIS 216
Query: 339 ACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDL 398
ACS L L G++IH+ K F+ YV SAL++MY KC L +AR +F + + ++ L
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQK--MPRKSL 274
Query: 399 ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDK 458
++WN MI Y G K + + N+M G + + T +L ACS + + G
Sbjct: 275 VAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY 334
Query: 459 LLKNRSIQVREDHYAC-LVDL---CGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVH 514
++ RS+ + + C L+DL CG A + F+
Sbjct: 335 VI--RSVVNADIYVNCSLIDLYFKCGEANLAETVFS------------------------ 368
Query: 515 GNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQ----- 569
K + + A +++++ + Y SVG W +A V +M G+K
Sbjct: 369 --------------KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 570 ---PGCSW---VEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTK 607
P CS +E G + + + + ELL LLD+++K
Sbjct: 415 SVLPACSQLAALEKGKQIHL-SISESRLETDELLLSALLDMYSK 457
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 321 bits (823), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 199/635 (31%), Positives = 333/635 (52%), Gaps = 70/635 (11%)
Query: 41 LHSAMKDCNTSISRLC----QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEAR 96
+ S ++DC S L + G +DDA K+FD +P+R+ W ++ GY+ G +EA
Sbjct: 200 VKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAI 259
Query: 97 KLFD-----GPDAMK---------------------------------DVVTWTALVNGY 118
+LF G + + D + T+L+N Y
Sbjct: 260 RLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFY 319
Query: 119 VKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP-ERNVVSWNTII 177
K+ IE AE +F M E++V +WN +I GY + G E A+ + + M E+ T+
Sbjct: 320 CKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLA 379
Query: 178 KALSECGRIEDAQ-------WHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR 230
+S R E+ + + E D+ +T++D A G + DA+++FD +
Sbjct: 380 TLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK 439
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPERDMP----SWNTLVTGFIQNGDLNRAEKLF 286
+++ WN ++ YA++ EAL LF M +P +WN ++ ++NG ++ A+ +F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 287 HEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
+M N+I+WT MM G VQ+G SEEA+ K+Q + L+PN + L AC+
Sbjct: 500 LQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQ-ESGLRPNAFSITVALSACAH 558
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVV--SALINMYSKCGELHIARRIFDEGLLRQRDLIS 400
LA L+ G+ IH I + Q S+ V ++L++MY+KCG+++ A ++F L + L
Sbjct: 559 LASLHIGRTIHGYIIRN-LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPL-- 615
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLL 460
N MI+AYA +G KEAI L+ ++ +G + +++T +L+AC+HAG + + ++ F ++
Sbjct: 616 SNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIV 675
Query: 461 KNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIG 520
RS++ +HY +VDL AG ++A +IE + + L+A CN ++
Sbjct: 676 SKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELV 735
Query: 521 KLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNT 580
+++K+L+ EPEN+G Y +SN YA G W E +R MK KGLKK+PGCSW+++
Sbjct: 736 DYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGE 795
Query: 581 --VQVFVVGDKSHSQ----SELLGYLLLDLHTKMK 609
V VFV DK+H++ +L LL D+ T K
Sbjct: 796 EGVHVFVANDKTHTRINEIQMMLALLLYDMGTGSK 830
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 237/497 (47%), Gaps = 70/497 (14%)
Query: 24 IINGYPFLRTMSTSTSSLH---SAMKDCNTS----ISRLCQEGRIDDARKLFDRMPERDL 76
I N PF ++S+ SS H A +TS +S LC+ G I +A L M R+L
Sbjct: 9 IPNKVPF--SVSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNL 66
Query: 77 HLWGTMINGYIMCGVIKE----------ARKLFDGPDAMKDVVTWTALVNGYVKLNQIEE 126
+ G I G I+ G + E AR L +G ++ T LV Y K + +E
Sbjct: 67 RI-GPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEI 125
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSE-CGR 185
AE LF ++ RNV SW +I R G E AL F M E + N ++ + + CG
Sbjct: 126 AEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGA 185
Query: 186 IEDAQW----HFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVM 238
++ +++ H ++ E V +++ D G +DDA ++FD +P RN V+WN +
Sbjct: 186 LKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNAL 245
Query: 239 IKGYAKNRRLDEALELFERM------PERDMPSW-------------------------- 266
+ GY +N + +EA+ LF M P R S
Sbjct: 246 MVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGM 305
Query: 267 -------NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
+L+ + + G + AE +F M +K+V+TW +++GYVQ GL E+A+ +
Sbjct: 306 ELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQL 365
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
++ + LK + T T++ A + L G+++ + +F+ + S +++MY+KCG
Sbjct: 366 MRLEK-LKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCG 424
Query: 380 ELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
+ A+++FD + ++DLI WN ++AAYA G EA+ LF MQ G N +T+ +
Sbjct: 425 SIVDAKKVFDSTV--EKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLI 482
Query: 440 LTACSHAGLVEEGLQYF 456
+ + G V+E F
Sbjct: 483 ILSLLRNGQVDEAKDMF 499
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 33/329 (10%)
Query: 40 SLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF 99
S S + +T + + G I DA+K+FD E+DL LW T++ Y G+ EA +LF
Sbjct: 405 SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLF 464
Query: 100 DG---PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARN 152
G +V+TW ++ ++ Q++EA+ +F +M N+ SW TM++G +N
Sbjct: 465 YGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQN 524
Query: 153 GQTEKALDLFRRMPERNV-VSWNTIIKALSECGRIEDAQWHF----------NQMRERDV 201
G +E+A+ R+M E + + +I ALS C + A H N V
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVALSACAHL--ASLHIGRTIHGYIIRNLQHSSLV 582
Query: 202 KSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER 261
T++VD A G ++ A ++F + N MI YA L EA+ L+ +
Sbjct: 583 SIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGV 642
Query: 262 DMPSWNTLVTGFI----QNGDLNRAEKLFHEMPQKNVIT-----WTAMMTGYVQHGLSEE 312
+ N +T + GD+N+A ++F ++ K + + M+ G +E+
Sbjct: 643 GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEK 702
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACS 341
AL++ ++ KP+ +++ +C+
Sbjct: 703 ALRLIEEM----PFKPDARMIQSLVASCN 727
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/642 (30%), Positives = 326/642 (50%), Gaps = 89/642 (13%)
Query: 39 SSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL 98
S L S + N+ IS L G +D A +FD+M ERD W ++ Y G I+E+ ++
Sbjct: 172 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 231
Query: 99 FDGPDAMKDVVTWTALVNGYVKLNQIEEAE------RLFYEMP-ERNVRSWNTMIDGYAR 151
F D V T + L ++ + L +M + V NT++ YA
Sbjct: 232 FSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 291
Query: 152 NGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQM----RERDVKSWTT- 206
G++ +A +F++MP ++++SWN+++ + GR DA M + + ++T+
Sbjct: 292 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 351
Query: 207 --------------------MVDGLAIN--------------GRVDDARELFDRMPVRNV 232
+V GL N G + ++R + +MP R+V
Sbjct: 352 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 411
Query: 233 VSWNVMIKGYAKNRRLDEALELFERMP--------------------------------- 259
V+WN +I GYA++ D+AL F+ M
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 471
Query: 260 -------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
E D N+L+T + + GDL+ ++ LF+ + +N+ITW AM+ HG EE
Sbjct: 472 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 531
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI 372
LK+ +K+++ + + +F L A + LA L EGQQ+H L K F+ +++ +A
Sbjct: 532 VLKLVSKMRS-FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 590
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
+MYSKCGE+ ++ + R L SWN +I+A HGY +E F++M E+G +
Sbjct: 591 DMYSKCGEIGEVVKMLPPSV--NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 648
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII 492
VT+V LLTACSH GLV++GL Y+D + ++ ++ +H C++DL GR+GRL EA I
Sbjct: 649 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFI 708
Query: 493 EGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWK 552
+ + + VW LLA C +HGN D G+ A+ + K+EPE+ Y L SNM+A+ G+W+
Sbjct: 709 SKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWE 768
Query: 553 EAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQS 594
+ NVR +M K +KK+ CSWV++ + V F +GD++H Q+
Sbjct: 769 DVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 810
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 220/470 (46%), Gaps = 54/470 (11%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
+ DV TA+++ Y + + ++F EMP+RNV SW +++ GY+ G+ E+ +D+++
Sbjct: 74 LSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKG 133
Query: 165 MPERNV-VSWNTIIKALSECGRIEDAQWHFNQMRERDVKSW--------TTMVDGLAING 215
M V + N++ +S CG ++D Q+ + VKS +++ L G
Sbjct: 134 MRGEGVGCNENSMSLVISSCGLLKDESLG-RQIIGQVVKSGLESKLAVENSLISMLGSMG 192
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM----------------- 258
VD A +FD+M R+ +SWN + YA+N ++E+ +F M
Sbjct: 193 NVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLS 252
Query: 259 --PERDMPSW--------------------NTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
D W NTL+ + G A +F +MP K++I+
Sbjct: 253 VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS 312
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
W ++M +V G S +AL + + + N TF + L AC +G+ +H L+
Sbjct: 313 WNSLMASFVNDGRSLDALGLLCSMISS-GKSVNYVTFTSALAACFTPDFFEKGRILHGLV 371
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
+ + + +AL++MY K GE+ +RR+ + + +RD+++WN +I YA +
Sbjct: 372 VVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ--MPRRDVVAWNALIGGYAEDEDPDK 429
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
A+ F M+ G +N +T V +L+AC G + E + + + + E L+
Sbjct: 430 ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLI 489
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNA-DIGKLVAK 525
+ + G L + ++ GL + ++ W +LA HG+ ++ KLV+K
Sbjct: 490 TMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGEEVLKLVSK 538
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 140/550 (25%), Positives = 245/550 (44%), Gaps = 105/550 (19%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG---------PDAMKDVV 109
G + +RK+F+ MP+R++ W +++ GY G +E ++ G ++M V+
Sbjct: 91 GLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150
Query: 110 TWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERN 169
+ L+ QI ++ E + N++I G + A +F +M ER+
Sbjct: 151 SSCGLLKDESLGRQI--IGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERD 208
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMRE-RDVKSWTTMVDGLAINGRVDDAR------E 222
+SWN+I A ++ G IE++ F+ MR D + TT+ L++ G VD +
Sbjct: 209 TISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHG 268
Query: 223 LFDRMPVRNVVS-WNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNR 281
L +M +VV N +++ YA R EA +F++MP +D+ SWN+L+ F+ +G
Sbjct: 269 LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLD 328
Query: 282 AEKLFHEMPQK----NVITWTAMMT----------GYVQHGLSEEALKIFNKL------- 320
A L M N +T+T+ + G + HGL + +N++
Sbjct: 329 ALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVS 388
Query: 321 -------------------------------------QADHAL-----------KPNTGT 332
D AL N T
Sbjct: 389 MYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYIT 448
Query: 333 FVTVLGAC---SDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFD 389
V+VL AC DL L G+ +H I F+ +V ++LI MY+KCG+L ++ +F+
Sbjct: 449 VVSVLSACLLPGDL--LERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFN 506
Query: 390 EGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 449
L R++I+WN M+AA AHHG+G+E + L +KM+ G + ++ E L+A + ++
Sbjct: 507 G--LDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 564
Query: 450 EEGLQYFDKLLKNRSIQVREDH----YACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWG 505
EEG Q L ++++ +H + D+ + G + E ++ V+ SL W
Sbjct: 565 EEGQQ-----LHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPP-SVNRSLPSWN 618
Query: 506 PLLAGCNVHG 515
L++ HG
Sbjct: 619 ILISALGRHG 628
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 207/468 (44%), Gaps = 64/468 (13%)
Query: 134 MPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKAL-SECGRI-----E 187
MP RN SWNTM+ G R G + ++ FR+M + + + +I +L + CGR E
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 188 DAQWHFNQMRE---RDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAK 244
Q H + DV T ++ + G V +R++F+ MP RNVVSW ++ GY+
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 245 NRRLDEALELFERMP---------------------------------------ERDMPS 265
+E +++++ M E +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHA 325
N+L++ G+++ A +F +M +++ I+W ++ Y Q+G EE+ +IF+ ++ H
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
+ N+ T T+L + G+ IH L+ K F V + L+ MY+ G A
Sbjct: 241 -EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEAN 299
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC-- 443
+F + + +DLISWN ++A++ + G +A+ L M G N VT+ L AC
Sbjct: 300 LVFKQ--MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFT 357
Query: 444 ---SHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLS 500
G + GL L N+ I LV + G+ G + E+ ++ +
Sbjct: 358 PDFFEKGRILHGLVVVSGLFYNQIIG------NALVSMYGKIGEMSESRRVLLQM-PRRD 410
Query: 501 LSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASV 548
+ W L+ G + D L A + +++E ++ +++S + A +
Sbjct: 411 VVAWNALIGGYAEDEDPD-KALAAFQTMRVEGVSSNYITVVSVLSACL 457
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 199/642 (30%), Positives = 326/642 (50%), Gaps = 89/642 (13%)
Query: 39 SSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL 98
S L S + N+ IS L G +D A +FD+M ERD W ++ Y G I+E+ ++
Sbjct: 189 SGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRI 248
Query: 99 FDGPDAMKDVVTWTALVNGYVKLNQIEEAE------RLFYEMP-ERNVRSWNTMIDGYAR 151
F D V T + L ++ + L +M + V NT++ YA
Sbjct: 249 FSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAG 308
Query: 152 NGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQM----RERDVKSWTT- 206
G++ +A +F++MP ++++SWN+++ + GR DA M + + ++T+
Sbjct: 309 AGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 368
Query: 207 --------------------MVDGLAIN--------------GRVDDARELFDRMPVRNV 232
+V GL N G + ++R + +MP R+V
Sbjct: 369 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDV 428
Query: 233 VSWNVMIKGYAKNRRLDEALELFERMP--------------------------------- 259
V+WN +I GYA++ D+AL F+ M
Sbjct: 429 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHA 488
Query: 260 -------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
E D N+L+T + + GDL+ ++ LF+ + +N+ITW AM+ HG EE
Sbjct: 489 YIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEE 548
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI 372
LK+ +K+++ + + +F L A + LA L EGQQ+H L K F+ +++ +A
Sbjct: 549 VLKLVSKMRS-FGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAA 607
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
+MYSKCGE+ ++ + R L SWN +I+A HGY +E F++M E+G +
Sbjct: 608 DMYSKCGEIGEVVKMLPPSV--NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPG 665
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII 492
VT+V LLTACSH GLV++GL Y+D + ++ ++ +H C++DL GR+GRL EA I
Sbjct: 666 HVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFI 725
Query: 493 EGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWK 552
+ + + VW LLA C +HGN D G+ A+ + K+EPE+ Y L SNM+A+ G+W+
Sbjct: 726 SKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWE 785
Query: 553 EAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQS 594
+ NVR +M K +KK+ CSWV++ + V F +GD++H Q+
Sbjct: 786 DVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQT 827
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 139/555 (25%), Positives = 248/555 (44%), Gaps = 93/555 (16%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA----RKLFD---GPDA------- 104
GR+ AR LFD MP R+ W TM++G + G+ E RK+ D P +
Sbjct: 6 GRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLV 65
Query: 105 -------------------------MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNV 139
+ DV TA+++ Y + + ++F EMP+RNV
Sbjct: 66 TACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNV 125
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSECGRIEDAQWHFNQMRE 198
SW +++ GY+ G+ E+ +D+++ M V + N++ +S CG ++D Q+
Sbjct: 126 VSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG-RQIIG 184
Query: 199 RDVKSW--------TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDE 250
+ VKS +++ L G VD A +FD+M R+ +SWN + YA+N ++E
Sbjct: 185 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 244
Query: 251 ALELFERM-------------------PERDMPSW--------------------NTLVT 271
+ +F M D W NTL+
Sbjct: 245 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 304
Query: 272 GFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
+ G A +F +MP K++I+W ++M +V G S +AL + + + N
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISS-GKSVNYV 363
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
TF + L AC +G+ +H L+ + + + +AL++MY K GE+ +RR+ +
Sbjct: 364 TFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQ- 422
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEE 451
+ +RD+++WN +I YA +A+ F M+ G +N +T V +L+AC G + E
Sbjct: 423 -MPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 452 GLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGC 511
+ + + + E L+ + + G L + ++ GL + ++ W +LA
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAAN 540
Query: 512 NVHGNA-DIGKLVAK 525
HG+ ++ KLV+K
Sbjct: 541 AHHGHGEEVLKLVSK 555
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 119/484 (24%), Positives = 215/484 (44%), Gaps = 64/484 (13%)
Query: 118 YVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTII 177
Y K +++ A LF MP RN SWNTM+ G R G + ++ FR+M + + + +I
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 178 KAL-SECGRI-----EDAQWHFNQMRE---RDVKSWTTMVDGLAINGRVDDARELFDRMP 228
+L + CGR E Q H + DV T ++ + G V +R++F+ MP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 229 VRNVVSWNVMIKGYAKNRRLDEALELFERMP----------------------------- 259
RNVVSW ++ GY+ +E +++++ M
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 260 ----------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGL 309
E + N+L++ G+++ A +F +M +++ I+W ++ Y Q+G
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS 369
EE+ +IF+ ++ H + N+ T T+L + G+ IH L+ K F V +
Sbjct: 242 IEESFRIFSLMRRFHD-EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCN 300
Query: 370 ALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGF 429
L+ MY+ G A +F + + +DLISWN ++A++ + G +A+ L M G
Sbjct: 301 TLLRMYAGAGRSVEANLVFKQ--MPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 430 QANDVTYVELLTACSHAGLVEE-----GLQYFDKLLKNRSIQVREDHYACLVDLCGRAGR 484
N VT+ L AC E+ GL L N+ I LV + G+ G
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG------NALVSMYGKIGE 412
Query: 485 LKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNM 544
+ E+ ++ + + W L+ G + D L A + +++E ++ +++S +
Sbjct: 413 MSESRRVLLQMP-RRDVVAWNALIGGYAEDEDPD-KALAAFQTMRVEGVSSNYITVVSVL 470
Query: 545 YASV 548
A +
Sbjct: 471 SACL 474
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 374 MYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
MY+K G + AR +FD ++ R+ +SWN M++ G E + F KM +LG + +
Sbjct: 1 MYTKFGRVKPARHLFD--IMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSS 58
Query: 434 VTYVELLTACSHAG-LVEEGLQ 454
L+TAC +G + EG+Q
Sbjct: 59 FVIASLVTACGRSGSMFREGVQ 80
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 191/579 (32%), Positives = 299/579 (51%), Gaps = 74/579 (12%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF------------------- 99
G +D ARK+FD M ER++ W +MI GY K+A LF
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCV 242
Query: 100 -DGPDAMKDVVTW-------------------TALVNGYVKLNQIEEAERLFYEMPERNV 139
++D+ T +ALV+ Y+K N I+ A+RLF E N+
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNL 302
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSECGRIEDAQWHFNQMRE 198
N M Y R G T +AL +F M + V +++ A+S C ++ + W
Sbjct: 303 DLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW------- 355
Query: 199 RDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSW----NVMIKGYAKNRRLDEALEL 254
G + +G V R F+ SW N +I Y K R D A +
Sbjct: 356 -----------GKSCHGYV--LRNGFE--------SWDNICNALIDMYMKCHRQDTAFRI 394
Query: 255 FERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
F+RM + + +WN++V G+++NG+++ A + F MP+KN+++W +++G VQ L EEA+
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
++F +Q+ + + T +++ AC L L+ + I+ I K Q + + L++M
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 375 YSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
+S+CG+ A IF+ L RD+ +W I A A G + AI LF+ M E G + + V
Sbjct: 515 FSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEG 494
+V LTACSH GLV++G + F +LK + + HY C+VDL GRAG L+EA +IE
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 495 LGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEA 554
+ ++ + +W LLA C V GN ++ A+KI + PE G+Y LLSN+YAS G+W +
Sbjct: 633 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 692
Query: 555 ANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQ 593
A VR+ MK+KGL+K PG S +++ F GD+SH +
Sbjct: 693 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 171/323 (52%), Gaps = 12/323 (3%)
Query: 204 WTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMP 259
+ +++ G A +G ++A LF RM + ++ + AK+R +++ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 260 E----RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
+ +D+ N+LV + + G+L+ A K+F EM ++NV++WT+M+ GY + +++A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
+F ++ D + PN+ T V V+ AC+ L L G++++ I + + + +VSAL++MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
KC + +A+R+FDE DL N M + Y G +EA+ +FN M + G + + ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
+ +++CS + G +L+N + ++ L+D+ + R AF I + +
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 496 GVDLSLSVWGPLLAGCNVHGNAD 518
+ ++ W ++AG +G D
Sbjct: 399 S-NKTVVTWNSIVAGYVENGEVD 420
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 158/347 (45%), Gaps = 49/347 (14%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMK 106
CN I + R D A ++FDRM + + W +++ GY+ G + A + F+ P+ K
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE--K 432
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
++V+W +++G V+ + EEA +F M + +G +G
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ---------EGVNADG------------- 470
Query: 167 ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARE 222
V+ +I A G ++ A+W + + + DV+ TT+VD + G + A
Sbjct: 471 ----VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 223 LFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGD 278
+F+ + R+V +W I A + A+ELF+ M E+ D ++ +T G
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 279 LNRAEKLFHEMPQKNVIT-----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
+ + +++F+ M + + ++ + M+ + GL EEA+++ D ++PN +
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE----DMPMEPNDVIW 642
Query: 334 VTVLGACSDLAGLNEGQQIHQLISKTAFQES-TYVVSALINMYSKCG 379
++L AC + + I A + + +YV+ L N+Y+ G
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVL--LSNVYASAG 687
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 320 bits (821), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 192/589 (32%), Positives = 303/589 (51%), Gaps = 74/589 (12%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF--------- 99
N+ + + G +D ARK+FD M ER++ W +MI GY K+A LF
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 100 -----------DGPDAMKDVVTW-------------------TALVNGYVKLNQIEEAER 129
++D+ T +ALV+ Y+K N I+ A+R
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKR 292
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSECGRIED 188
LF E N+ N M Y R G T +AL +F M + V +++ A+S C ++ +
Sbjct: 293 LFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRN 352
Query: 189 AQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSW----NVMIKGYAK 244
W G + +G V R F+ SW N +I Y K
Sbjct: 353 ILW------------------GKSCHGYV--LRNGFE--------SWDNICNALIDMYMK 384
Query: 245 NRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGY 304
R D A +F+RM + + +WN++V G+++NG+++ A + F MP+KN+++W +++G
Sbjct: 385 CHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGL 444
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQES 364
VQ L EEA+++F +Q+ + + T +++ AC L L+ + I+ I K Q
Sbjct: 445 VQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLD 504
Query: 365 TYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM 424
+ + L++M+S+CG+ A IF+ L RD+ +W I A A G + AI LF+ M
Sbjct: 505 VRLGTTLVDMFSRCGDPESAMSIFNS--LTNRDVSAWTAAIGAMAMAGNAERAIELFDDM 562
Query: 425 QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGR 484
E G + + V +V LTACSH GLV++G + F +LK + + HY C+VDL GRAG
Sbjct: 563 IEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGL 622
Query: 485 LKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNM 544
L+EA +IE + ++ + +W LLA C V GN ++ A+KI + PE G+Y LLSN+
Sbjct: 623 LEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNV 682
Query: 545 YASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQ 593
YAS G+W + A VR+ MK+KGL+K PG S +++ F GD+SH +
Sbjct: 683 YASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPE 731
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 171/323 (52%), Gaps = 12/323 (3%)
Query: 204 WTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMP 259
+ +++ G A +G ++A LF RM + ++ + AK+R +++ +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 260 E----RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
+ +D+ N+LV + + G+L+ A K+F EM ++NV++WT+M+ GY + +++A+
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
+F ++ D + PN+ T V V+ AC+ L L G++++ I + + + +VSAL++MY
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMY 281
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
KC + +A+R+FDE DL N M + Y G +EA+ +FN M + G + + ++
Sbjct: 282 MKCNAIDVAKRLFDEYGASNLDLC--NAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
+ +++CS + G +L+N + ++ L+D+ + R AF I + +
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRN-GFESWDNICNALIDMYMKCHRQDTAFRIFDRM 398
Query: 496 GVDLSLSVWGPLLAGCNVHGNAD 518
+ ++ W ++AG +G D
Sbjct: 399 S-NKTVVTWNSIVAGYVENGEVD 420
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 142/307 (46%), Gaps = 46/307 (14%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMK 106
CN I + R D A ++FDRM + + W +++ GY+ G + A + F+ P+ K
Sbjct: 375 CNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPE--K 432
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
++V+W +++G V+ + EEA +F M + +G +G
Sbjct: 433 NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ---------EGVNADG------------- 470
Query: 167 ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARE 222
V+ +I A G ++ A+W + + + DV+ TT+VD + G + A
Sbjct: 471 ----VTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMS 526
Query: 223 LFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGD 278
+F+ + R+V +W I A + A+ELF+ M E+ D ++ +T G
Sbjct: 527 IFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGL 586
Query: 279 LNRAEKLFHEMPQKNVIT-----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
+ + +++F+ M + + ++ + M+ + GL EEA+++ D ++PN +
Sbjct: 587 VQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIE----DMPMEPNDVIW 642
Query: 334 VTVLGAC 340
++L AC
Sbjct: 643 NSLLAAC 649
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 178/578 (30%), Positives = 298/578 (51%), Gaps = 74/578 (12%)
Query: 90 GVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGY 149
G + + + DG D+ +++ + +V Y K ++E+A ++F MPE++ WNTMI GY
Sbjct: 138 GRVIHGQAVVDGCDS--ELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGY 195
Query: 150 ARNGQTEKALDLFRRMPERNVVSWNT---------------------------------- 175
+N +++ +FR + + +T
Sbjct: 196 RKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSH 255
Query: 176 ------IIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM-- 227
I S+CG+I+ F + R+ D+ ++ M+ G NG + + LF +
Sbjct: 256 DYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELML 315
Query: 228 --------------PVRNVVSWNVMIKGYA-KNRRLDEALELFERMPERDMPSWNTLVTG 272
PV + I GY K+ L A L T
Sbjct: 316 SGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHA------------SVSTALTTV 363
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+ + ++ A KLF E P+K++ +W AM++GY Q+GL+E+A+ +F ++Q PN T
Sbjct: 364 YSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSE-FSPNPVT 422
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
+L AC+ L L+ G+ +H L+ T F+ S YV +ALI MY+KCG + ARR+FD L
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFD--L 480
Query: 393 LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
+ +++ ++WN MI+ Y HG G+EA+N+F +M G VT++ +L ACSHAGLV+EG
Sbjct: 481 MTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEG 540
Query: 453 LQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN 512
+ F+ ++ + HYAC+VD+ GRAG L+ A IE + ++ SVW LL C
Sbjct: 541 DEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACR 600
Query: 513 VHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 572
+H + ++ + V++K+ +++P+N G + LLSN++++ + +AA VR K + L K PG
Sbjct: 601 IHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGY 660
Query: 573 SWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
+ +E+G T VF GD+SH Q + + L L KM++
Sbjct: 661 TLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMRE 698
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 152/346 (43%), Gaps = 66/346 (19%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD----------- 100
IS + G+I LF + D+ + MI+GY G + + LF
Sbjct: 263 ISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRS 322
Query: 101 ------------------------GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE 136
+ + TAL Y KLN+IE A +LF E PE
Sbjct: 323 STLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPE 382
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWH 192
+++ SWN MI GY +NG TE A+ LFR M + N V+ I+ A ++ G + +W
Sbjct: 383 KSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV 442
Query: 193 FNQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRL 248
+ +R D +S T ++ A G + +AR LFD M +N V+WN MI GY + +
Sbjct: 443 HDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQG 502
Query: 249 DEALELFERMPERDM-PSWNTLV--------TGFIQNGDLNRAEKLFHEMPQK-----NV 294
EAL +F M + P+ T + G ++ GD ++F+ M + +V
Sbjct: 503 QEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGD-----EIFNSMIHRYGFEPSV 557
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC 340
+ M+ + G + AL+ + +++P + + T+LGAC
Sbjct: 558 KHYACMVDILGRAGHLQRALQFIEAM----SIEPGSSVWETLLGAC 599
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 100/231 (43%), Gaps = 17/231 (7%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYI-MCGVI------KEARKLFDG 101
N IS Q G +DA LF M + + I + C + K L
Sbjct: 389 NAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRS 448
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL 161
D + TAL+ Y K I EA RLF M ++N +WNTMI GY +GQ ++AL++
Sbjct: 449 TDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNI 508
Query: 162 FRRMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMRER-----DVKSWTTMVDGLA 212
F M + V++ ++ A S G +++ FN M R VK + MVD L
Sbjct: 509 FYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILG 568
Query: 213 INGRVDDARELFDRMPVRNVVS-WNVMIKGYAKNRRLDEALELFERMPERD 262
G + A + + M + S W ++ ++ + A + E++ E D
Sbjct: 569 RAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELD 619
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 198/642 (30%), Positives = 320/642 (49%), Gaps = 88/642 (13%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DG- 101
CN +S G + A +F M +RD + T+ING CG ++A +LF DG
Sbjct: 326 CNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGL 385
Query: 102 -PDA--MKDVVTWT-----------------------------ALVNGYVKLNQIEEAER 129
PD+ + +V AL+N Y K IE A
Sbjct: 386 EPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALD 445
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIKALSECGR 185
F E NV WN M+ Y + +FR+M +V ++ +I+K G
Sbjct: 446 YFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGD 505
Query: 186 IEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKG 241
+E + +Q+ + + + + ++D A G++D A ++ R ++VVSW MI G
Sbjct: 506 LELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAG 565
Query: 242 YAKNRRLDEALELFERMPER---------------------------------------D 262
Y + D+AL F +M +R D
Sbjct: 566 YTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSD 625
Query: 263 MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
+P N LVT + + G + + F + + I W A+++G+ Q G +EEAL++F ++
Sbjct: 626 LPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNR 685
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+ + N TF + + A S+ A + +G+Q+H +I+KT + T V +ALI+MY+KCG +
Sbjct: 686 E-GIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSIS 744
Query: 383 IARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTA 442
A + F E + ++ +SWN +I AY+ HG+G EA++ F++M + N VT V +L+A
Sbjct: 745 DAEKQFLE--VSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSA 802
Query: 443 CSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLS 502
CSH GLV++G+ YF+ + + + +HY C+VD+ RAG L A I+ + +
Sbjct: 803 CSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDAL 862
Query: 503 VWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMK 562
VW LL+ C VH N +IG+ A +L++EPE++ TY LLSN+YA KW R KMK
Sbjct: 863 VWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMK 922
Query: 563 DKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDL 604
+KG+KK+PG SW+EV N++ F VGD++H ++ + DL
Sbjct: 923 EKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDL 964
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 218/479 (45%), Gaps = 39/479 (8%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTM----INGYIMCGVIKEARKLFDG-PDAMKDVVTWTA 113
G +D+ RKL ++ + L G + + Y+ G + A K+FD P+ + + TW
Sbjct: 99 GSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPE--RTIFTWNK 156
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGY---ARNGQTEKALDLFRRMPER-- 168
++ N I E LF M NV G R G A D+ ++ R
Sbjct: 157 MIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV--AFDVVEQIHARIL 214
Query: 169 ------NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARE 222
+ V N +I S G ++ A+ F+ +R +D SW M+ GL+ N +A
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 223 LFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP--------ERDMPSWNTLVTGFI 274
LF M V ++ + E+LE+ E++ D N LV+ +
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYF 334
Query: 275 QNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFV 334
G+L AE +F M Q++ +T+ ++ G Q G E+A+++F ++ D L+P++ T
Sbjct: 335 HLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLA 393
Query: 335 TVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR 394
+++ ACS L GQQ+H +K F + + AL+N+Y+KC ++ A F E
Sbjct: 394 SLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE--TE 451
Query: 395 QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
+++ WN M+ AY + + +F +MQ N TY +L C G +E G Q
Sbjct: 452 VENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQ 511
Query: 455 YFDKLLKNRSIQVREDHYAC--LVDLCGRAGRLKEAFNI-IEGLGVDLSLSVWGPLLAG 510
+++K + + Y C L+D+ + G+L A++I I G D + W ++AG
Sbjct: 512 IHSQIIKT---NFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKD--VVSWTTMIAG 565
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 123/515 (23%), Positives = 221/515 (42%), Gaps = 116/515 (22%)
Query: 41 LHSAMKD----CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEAR 96
L+ ++D CN I + G +D AR++FD + +D W MI+G EA
Sbjct: 214 LYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAI 273
Query: 97 KLF---------DGPDAMKDVVT-----------------------------WTALVNGY 118
+LF P A V++ ALV+ Y
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLY 333
Query: 119 VKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM------PERNVVS 172
L + AE +F M +R+ ++NT+I+G ++ G EKA++LF+RM P+ N ++
Sbjct: 334 FHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLA 393
Query: 173 WNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGR--------------VD 218
+++ A S G + R + + ++TT + G A N + ++
Sbjct: 394 --SLVVACSADGTL---------FRGQQLHAYTTKL-GFASNNKIEGALLNLYAKCADIE 441
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP-ERDMP---SWNTLVTGFI 274
A + F V NVV WNVM+ Y L + +F +M E +P ++ +++ I
Sbjct: 442 TALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI 501
Query: 275 QNGDLNRAEKLFHEMPQ-----------------------------------KNVITWTA 299
+ GDL E++ ++ + K+V++WT
Sbjct: 502 RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTT 561
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
M+ GY Q+ ++AL F ++ D ++ + + AC+ L L EGQQIH +
Sbjct: 562 MIAGYTQYNFDDKALTTFRQM-LDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS 620
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAIN 419
F +AL+ +YS+CG++ + F++ D I+WN +++ + G +EA+
Sbjct: 621 GFSSDLPFQNALVTLYSRCGKIEESYLAFEQ--TEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 420 LFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
+F +M G N+ T+ + A S +++G Q
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 184/432 (42%), Gaps = 77/432 (17%)
Query: 207 MVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPS- 265
+ D G + A ++FD MP R + +WN MIK A + E LF RM ++
Sbjct: 126 LFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPN 185
Query: 266 ---------------------------------------WNTLVTGFIQNGDLNRAEKLF 286
N L+ + +NG ++ A ++F
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 287 HEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGL 346
+ K+ +W AM++G ++ EA+++F + + P F +VL AC + L
Sbjct: 246 DGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESL 304
Query: 347 NEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIA 406
G+Q+H L+ K F TYV +AL+++Y G L A IF + QRD +++N +I
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN--MSQRDAVTYNTLIN 362
Query: 407 AYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ---YFDKL---- 459
+ GYG++A+ LF +M G + + T L+ ACS G + G Q Y KL
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFAS 422
Query: 460 ------------LKNRSIQVREDHYA-----------CLVDLCGRAGRLKEAFNIIEGLG 496
K I+ D++ ++ G L+ +F I +
Sbjct: 423 NNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQ 482
Query: 497 VDLSLS---VWGPLLAGCNVHGNADIGKLVAKKILKIEPE-NAGTYSLLSNMYASVGKWK 552
++ + + +L C G+ ++G+ + +I+K + NA S+L +MYA +GK
Sbjct: 483 IEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Query: 553 EAANVRMKMKDK 564
A ++ ++ K
Sbjct: 543 TAWDILIRFAGK 554
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 323 DHALKPNTGTFVTVLGACSDLAG-LNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
+ ++PN T +L C G L+EG+++H I K + + L + Y G+L
Sbjct: 77 NRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDL 136
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
+ A ++FDE + +R + +WN MI A E LF +M N+ T+ +L
Sbjct: 137 YGAFKVFDE--MPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC--LVDLCGRAGRLKEAFNIIEGLGVDL 499
AC + + ++ + + + R+ C L+DL R G + A + +GL +
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGL--RDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK- 251
Query: 500 SLSVWGPLLAG 510
S W +++G
Sbjct: 252 DHSSWVAMISG 262
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 311/553 (56%), Gaps = 49/553 (8%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
+ D + G+M + Y+ CG + +ARK+FD KDVVT +AL+ Y + +EE R+
Sbjct: 148 DMDAFVQGSMFHMYMRCGRMGDARKVFDRMSD-KDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 133 EMP----ERNVRSWNTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSE 182
EM E N+ SWN ++ G+ R+G ++A+ +F+++ P++ VS +++ ++ +
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVS--SVLPSVGD 264
Query: 183 C-----GRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV 237
GR+ + Q +D + M+D +G V LF++ + N
Sbjct: 265 SEMLNMGRLIHG-YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 238 MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITW 297
I G ++N +D+ALE+FE E+ M + NV++W
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTM---------------------------ELNVVSW 356
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
T+++ G Q+G EAL++F ++Q +KPN T ++L AC ++A L G+ H
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVA-GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV 415
Query: 358 KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEA 417
+ ++ +V SALI+MY+KCG +++++ +F+ ++ ++L+ WN ++ ++ HG KE
Sbjct: 416 RVHLLDNVHVGSALIDMYAKCGRINLSQIVFN--MMPTKNLVCWNSLMNGFSMHGKAKEV 473
Query: 418 INLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD 477
+++F + + + +++ LL+AC GL +EG +YF + + I+ R +HY+C+V+
Sbjct: 474 MSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVN 533
Query: 478 LCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGT 537
L GRAG+L+EA+++I+ + + VWG LL C + N D+ ++ A+K+ +EPEN GT
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGT 593
Query: 538 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELL 597
Y LLSN+YA+ G W E ++R KM+ GLKK PGCSW++V N V + GDKSH Q + +
Sbjct: 594 YVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQI 653
Query: 598 GYLLLDLHTKMKK 610
+ ++ +M+K
Sbjct: 654 TEKMDEISKEMRK 666
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 179/434 (41%), Gaps = 121/434 (27%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGY 118
GR+ DARK+FDRM + KDVVT +AL+ Y
Sbjct: 165 GRMGDARKVFDRMSD--------------------------------KDVVTCSALLCAY 192
Query: 119 VKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLFRRM------PER 168
+ +EE R+ EM E N+ SWN ++ G+ R+G ++A+ +F+++ P++
Sbjct: 193 ARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQ 252
Query: 169 NVVS---------------------------------WNTIIKALSECGRIEDAQWHFNQ 195
VS + +I + G + FNQ
Sbjct: 253 VTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQ 312
Query: 196 MRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEA 251
+ + GL+ NG VD A E+F+ + NVVSW +I G A+N + EA
Sbjct: 313 FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEA 372
Query: 252 LELFERM------PER-DMPSW--------------------------------NTLVTG 272
LELF M P +PS + L+
Sbjct: 373 LELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDM 432
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+ + G +N ++ +F+ MP KN++ W ++M G+ HG ++E + IF L LKP+ +
Sbjct: 433 YAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR-LKPDFIS 491
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKT-AFQESTYVVSALINMYSKCGELHIARRIFDEG 391
F ++L AC + +EG + +++S+ + S ++N+ + G+L A + E
Sbjct: 492 FTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKE- 550
Query: 392 LLRQRDLISWNGMI 405
+ + D W ++
Sbjct: 551 MPFEPDSCVWGALL 564
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 102/191 (53%), Gaps = 3/191 (1%)
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
L+ + N A+ + +P + ++++++ + L +++ +F+++ + H L P
Sbjct: 56 LIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFS-HGLIP 114
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
++ + C++L+ G+QIH + + +V ++ +MY +CG + AR++F
Sbjct: 115 DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVF 174
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGL 448
D + +D+++ + ++ AYA G +E + + ++M+ G +AN V++ +L+ + +G
Sbjct: 175 DR--MSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGY 232
Query: 449 VEEGLQYFDKL 459
+E + F K+
Sbjct: 233 HKEAVVMFQKI 243
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 69/130 (53%), Gaps = 9/130 (6%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMK---DVVTWTALV 115
GRI+ ++ +F+ MP ++L W +++NG+ M G KE +F+ + D +++T+L+
Sbjct: 437 GRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLL 496
Query: 116 NGYVKLNQIEEAERLFYEMPER-----NVRSWNTMIDGYARNGQTEKALDLFRRMP-ERN 169
+ ++ +E + F M E + ++ M++ R G+ ++A DL + MP E +
Sbjct: 497 SACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPD 556
Query: 170 VVSWNTIIKA 179
W ++ +
Sbjct: 557 SCVWGALLNS 566
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 320 bits (820), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 189/557 (33%), Positives = 300/557 (53%), Gaps = 62/557 (11%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSW 173
LV Y KL ++ ++ L R++ +WNT++ +N Q +AL+ R M V
Sbjct: 242 LVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPD 301
Query: 174 N-TIIKALSECGRIE----DAQWHFNQMR--ERDVKSW--TTMVDGLAINGRVDDARELF 224
TI L C +E + H ++ D S+ + +VD +V R +F
Sbjct: 302 EFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVF 361
Query: 225 DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE------------------------ 260
D M R + WN MI GY++N EAL LF M E
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 261 ----------------RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGY 304
RD NTL+ + + G ++ A ++F +M ++++TW M+TGY
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 305 VQHGLSEEALKIFNKLQ----------ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
V E+AL + +K+Q + +LKPN+ T +T+L +C+ L+ L +G++IH
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
K V SAL++MY+KCG L ++R++FD+ + Q+++I+WN +I AY HG G
Sbjct: 542 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQ--IPQKNVITWNVIIMAYGMHGNG 599
Query: 415 KEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC 474
+EAI+L M G + N+VT++ + ACSH+G+V+EGL+ F + + ++ DHYAC
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 475 LVDLCGRAGRLKEAFNIIEGLGVDLSLS-VWGPLLAGCNVHGNADIGKLVAKKILKIEPE 533
+VDL GRAGR+KEA+ ++ + D + + W LL +H N +IG++ A+ ++++EP
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 534 NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQ 593
A Y LL+N+Y+S G W +A VR MK++G++K+PGCSW+E G+ V FV GD SH Q
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 594 SELLGYLLLDLHTKMKK 610
SE L L L +M+K
Sbjct: 780 SEKLSGYLETLWERMRK 796
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 117/475 (24%), Positives = 209/475 (44%), Gaps = 65/475 (13%)
Query: 104 AMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFR 163
+ V LVN Y K ++F + ERN SWN++I + E AL+ FR
Sbjct: 129 GVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFR 188
Query: 164 RMPERNV-VSWNTIIKALSEC-------GRIEDAQWHFNQMRERDVKSW--TTMVDGLAI 213
M + NV S T++ ++ C G + Q H +R+ ++ S+ T+V
Sbjct: 189 CMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGK 248
Query: 214 NGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM----PERD------- 262
G++ ++ L R++V+WN ++ +N +L EALE M E D
Sbjct: 249 LGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSV 308
Query: 263 MPSWN---TLVTG------FIQNGDLNR--------------------AEKLFHEMPQKN 293
+P+ + L TG ++NG L+ ++F M +
Sbjct: 309 LPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRK 368
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
+ W AM+ GY Q+ +EAL +F ++ L N+ T V+ AC + + IH
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIH 428
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGY 413
+ K +V + L++MYS+ G++ IA RIF G + RDL++WN MI Y +
Sbjct: 429 GFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF--GKMEDRDLVTWNTMITGYVFSEH 486
Query: 414 GKEAINLFNKMQEL-----------GFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKN 462
++A+ L +KMQ L + N +T + +L +C+ + +G + +KN
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN 546
Query: 463 RSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNA 517
++ + LVD+ + G L+ + + + + ++ W ++ +HGN
Sbjct: 547 -NLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNG 599
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 148/361 (40%), Gaps = 85/361 (23%)
Query: 56 CQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-------------- 101
C ++ R++FD M +R + LW MI GY KEA LF G
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 102 ----PDAM---------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPE 136
P + +D L++ Y +L +I+ A R+F +M +
Sbjct: 409 AGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMED 468
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRMP--ERNV------VSWN----TIIKALSECG 184
R++ +WNTMI GY + E AL L +M ER V VS T++ L C
Sbjct: 469 RDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCA 528
Query: 185 RI-------EDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV 237
+ E + DV + +VD A G + +R++FD++P +NV++WNV
Sbjct: 529 ALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNV 588
Query: 238 MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITW 297
+I Y + EA++L M +V G + N +T+
Sbjct: 589 IIMAYGMHGNGQEAIDLLRMM----------MVQGV-----------------KPNEVTF 621
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
++ G+ +E L+IF ++ D+ ++P++ + V+ + E Q+ ++
Sbjct: 622 ISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Query: 358 K 358
+
Sbjct: 682 R 682
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 104/238 (43%), Gaps = 58/238 (24%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMC------------------G 90
NT + + G+ID A ++F +M +RDL W TMI GY+
Sbjct: 444 NTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERK 503
Query: 91 VIKEARKLFDGPDAM-------------------------------KDVVTWTALVNGYV 119
V K A ++ P+++ DV +ALV+ Y
Sbjct: 504 VSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYA 563
Query: 120 KLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNT 175
K ++ + ++F ++P++NV +WN +I Y +G ++A+DL R M + V V++ +
Sbjct: 564 KCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFIS 623
Query: 176 IIKALSECGRIEDAQWHFNQMR-----ERDVKSWTTMVDGLAINGRVDDARELFDRMP 228
+ A S G +++ F M+ E + +VD L GR+ +A +L + MP
Sbjct: 624 VFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMP 681
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 141/322 (43%), Gaps = 41/322 (12%)
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
W ++ V+ L EA+ + + +KP+ F +L A +DL + G+QIH +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIV-LGIKPDNYAFPALLKAVADLQDMELGKQIHAHV 123
Query: 357 SKTAFQ-ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK 415
K + +S V + L+N+Y KCG+ ++FD + +R+ +SWN +I++ +
Sbjct: 124 YKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWE 181
Query: 416 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKN--RSIQVREDHYA 473
A+ F M + + + T V ++TACS+ + EGL ++ R ++
Sbjct: 182 MALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKGELNSFIIN 240
Query: 474 CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG-CNVHGNADIGKLVAKKILK-IE 531
LV + G+ G+L + ++ G L W +L+ C + + + + +L+ +E
Sbjct: 241 TLVAMYGKLGKLASSKVLLGSFG-GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 532 PENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEV---GNTVQVFVVGD 588
P+ S+L P CS +E+ G + + + +
Sbjct: 300 PDEFTISSVL----------------------------PACSHLEMLRTGKELHAYALKN 331
Query: 589 KSHSQSELLGYLLLDLHTKMKK 610
S ++ +G L+D++ K+
Sbjct: 332 GSLDENSFVGSALVDMYCNCKQ 353
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 318 bits (816), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 201/621 (32%), Positives = 324/621 (52%), Gaps = 62/621 (9%)
Query: 33 TMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVI 92
T + L S ++ N+ + G ++A +L+ M +R G +GYI+ ++
Sbjct: 111 VFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQR-----GLTGDGYILPLIL 165
Query: 93 KEARKL--FDGPDAMKDVVTWTAL----------VNGYVKLNQIEEAERLFYEMPERNVR 140
+ R L F A V L + Y K ++ +A LF EMP RN
Sbjct: 166 RACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRM 225
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIEDAQWHFNQM 196
SWN MI G+++ E A+ +F M V+W +++ S+CG+ ED +F+ M
Sbjct: 226 SWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Query: 197 R-------------------ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV 237
R E + S V G I G ++ +P RN
Sbjct: 286 RMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE------YLPSRNA----- 334
Query: 238 MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ------ 291
+I Y K ++ +A LF ++ + + SWN+L+T F+ G L+ A LF E+ +
Sbjct: 335 LIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCN 394
Query: 292 --KNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG 349
NV+TWT+++ G G +++L+ F ++Q L N+ T +L C++L LN G
Sbjct: 395 VKANVVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVL-ANSVTICCILSICAELPALNLG 453
Query: 350 QQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYA 409
++IH + +T+ E+ V +AL+NMY+KCG L +F+ +R +DLISWN +I Y
Sbjct: 454 REIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEA--IRDKDLISWNSIIKGYG 511
Query: 410 HHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRE 469
HG+ ++A+++F++M GF + + V +L+ACSHAGLVE+G + F + K ++ ++
Sbjct: 512 MHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQ 571
Query: 470 DHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK 529
+HYAC+VDL GR G LKEA I++ + ++ + V G LL C +H N DI + +A ++
Sbjct: 572 EHYACIVDLLGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSV 631
Query: 530 IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDK 589
+EPE G+Y LLSN+Y++ G+W+E+ANVR K K LKK G SW+EV F G
Sbjct: 632 LEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSI 691
Query: 590 SHSQSELLGYLLLDLHTKMKK 610
S+ E + +L DL + M K
Sbjct: 692 VQSEFETIYPVLEDLVSHMLK 712
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/470 (24%), Positives = 214/470 (45%), Gaps = 81/470 (17%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPE---RNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV 170
L++ Y +L + +A +F + ++R WN+++ +G E AL+L+R M +R +
Sbjct: 95 LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGL 154
Query: 171 VS----WNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAI----NGRVDDARE 222
I++A GR + Q+ + +K +V+ L GR+ DA
Sbjct: 155 TGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYN 214
Query: 223 LFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRA 282
LF MPVRN +SWNVMIKG+++ + A+++FE M +
Sbjct: 215 LFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEF------------------- 255
Query: 283 EKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFN--KLQADHALKPNTGTFVTVLGAC 340
+ + +TWT++++ + Q G E+ LK F+ ++ + F +V C
Sbjct: 256 --------KPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSV---C 304
Query: 341 SDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS 400
++L L+ +++H + K F+E +ALI++Y K G++ A +F + +R + + S
Sbjct: 305 AELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQ--IRNKGIES 362
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQEL----GFQANDVTYVELLTACSHAGLVEEGLQYF 456
WN +I ++ G EA++LF++++E+ +AN VT+ ++ C+ G ++ L+YF
Sbjct: 363 WNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYF 422
Query: 457 DKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN 516
++ ++ + C++ +C A N+ G +HG+
Sbjct: 423 RQMQFSK-VLANSVTICCILSICAEL----PALNL------------------GREIHGH 459
Query: 517 ADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
I EN + L NMYA G E + V ++DK L
Sbjct: 460 V---------IRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDL 500
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 302/578 (52%), Gaps = 69/578 (11%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMING------------------------------YIM 88
G + A KLF ++PE D+ +W MI G +++
Sbjct: 82 GHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLL 141
Query: 89 CGVIKEARKLFDGPDAMKDVVTW---------TALVNGYVKLNQIEEAERLFYEMPERNV 139
G+ ++ L G VV + ALV Y ++ A +F + +V
Sbjct: 142 NGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDV 201
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN--TIIKALSECGRIEDAQWHFNQMR 197
SWN MI GY R + E++++L M ERN+VS T++ LS C +++D
Sbjct: 202 FSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTLLLVLSACSKVKD--------- 251
Query: 198 ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFER 257
K V + + + L N ++ YA +D A+ +F
Sbjct: 252 ----KDLCKRVHEYVSECKTEPSLRL-----------ENALVNAYAACGEMDIAVRIFRS 296
Query: 258 MPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIF 317
M RD+ SW ++V G+++ G+L A F +MP ++ I+WT M+ GY++ G E+L+IF
Sbjct: 297 MKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIF 356
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
++Q+ + P+ T V+VL AC+ L L G+ I I K + V +ALI+MY K
Sbjct: 357 REMQS-AGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFK 415
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
CG A+++F + + QRD +W M+ A++G G+EAI +F +MQ++ Q +D+TY+
Sbjct: 416 CGCSEKAQKVFHD--MDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYL 473
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGV 497
+L+AC+H+G+V++ ++F K+ + I+ HY C+VD+ GRAG +KEA+ I+ + +
Sbjct: 474 GVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPM 533
Query: 498 DLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANV 557
+ + VWG LL +H + + +L AKKIL++EP+N Y+LL N+YA +WK+ V
Sbjct: 534 NPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREV 593
Query: 558 RMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
R K+ D +KK PG S +EV FV GDKSH QSE
Sbjct: 594 RRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSE 631
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 178/407 (43%), Gaps = 86/407 (21%)
Query: 213 INGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNT 268
+ G V A +LF ++P +VV WN MIKG++K E + L+ M + D ++
Sbjct: 80 LGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPF 139
Query: 269 LVTG---------------------------FIQN---------GDLNRAEKLFHEMPQK 292
L+ G ++QN G ++ A +F ++
Sbjct: 140 LLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKE 199
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
+V +W M++GY + EE++++ +++ + + P + T + VL ACS + + +++
Sbjct: 200 DVFSWNLMISGYNRMKEYEESIELLVEMERN-LVSPTSVTLLLVLSACSKVKDKDLCKRV 258
Query: 353 HQLISKTAFQESTYVVSALINMYSKCGELHIARRIF-------------------DEGLL 393
H+ +S+ + S + +AL+N Y+ CGE+ IA RIF + G L
Sbjct: 259 HEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNL 318
Query: 394 R----------QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
+ RD ISW MI Y G E++ +F +MQ G ++ T V +LTAC
Sbjct: 319 KLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTAC 378
Query: 444 SHAGLVEEG---LQYFDKLLKNRSIQVREDHYACLVDL---CGRAGRLKEAFNIIEGLGV 497
+H G +E G Y DK + V L+D+ CG + + ++ F+ ++
Sbjct: 379 AHLGSLEIGEWIKTYIDKNKIKNDVVVGN----ALIDMYFKCGCSEKAQKVFHDMD---- 430
Query: 498 DLSLSVWGPLLAGC--NVHGNADIGKLVAKKILKIEPENAGTYSLLS 542
W ++ G N G I + + I+P++ +LS
Sbjct: 431 QRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLS 477
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 185/406 (45%), Gaps = 67/406 (16%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGY 118
G +D A ++F M RD+ W +++ GY+ G +K AR FD ++D ++WT +++GY
Sbjct: 285 GEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQM-PVRDRISWTIMIDGY 343
Query: 119 VKLNQIEEAERLFYEMPERNV----RSWNTMIDGYARNGQTEKALDLFRRMPERN----- 169
++ E+ +F EM + + +++ A G E + + ++N
Sbjct: 344 LRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIG-EWIKTYIDKNKIKND 402
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPV 229
VV N +I +CG E AQ F+ M +RD +WT MV GLA NG+ +A ++F +M
Sbjct: 403 VVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQD 462
Query: 230 RNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEM 289
++ + D ++ +++ +G +++A K F +M
Sbjct: 463 MSI---------------------------QPDDITYLGVLSACNHSGMVDQARKFFAKM 495
Query: 290 P-----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLA 344
+ +++ + M+ + GL +EA +I K+ + PN+ + +LGA +
Sbjct: 496 RSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM----PMNPNSIVWGALLGA----S 547
Query: 345 GLNEGQQIHQLISKTAFQ---ESTYVVSALINMYSKCGEL----HIARRIFDEGLLRQR- 396
L+ + + +L +K + ++ V + L N+Y+ C + R+I D + +
Sbjct: 548 RLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPG 607
Query: 397 -DLISWNG----MIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
LI NG +A H +E ++ K++EL ++ Y+
Sbjct: 608 FSLIEVNGFAHEFVAGDKSHLQSEE---IYMKLEELAQESTFAAYL 650
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 59/285 (20%)
Query: 13 HAPKLKTHPTF-----IINGYPFLRTMSTSTSSLHSAMKDCN----TSISR-LCQEGRID 62
+ + KT P+ ++N Y M + S MK + TSI + + G +
Sbjct: 261 YVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRS-MKARDVISWTSIVKGYVERGNLK 319
Query: 63 DARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-------PDAM---------- 105
AR FD+MP RD W MI+GY+ G E+ ++F PD
Sbjct: 320 LARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACA 379
Query: 106 ---------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT 144
DVV AL++ Y K E+A+++F++M +R+ +W
Sbjct: 380 HLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTA 439
Query: 145 MIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMR--- 197
M+ G A NGQ ++A+ +F +M + ++ +++ ++ A + G ++ A+ F +MR
Sbjct: 440 MVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDH 499
Query: 198 --ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMI 239
E + + MVD L G V +A E+ +MP+ N + W ++
Sbjct: 500 RIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIVWGALL 544
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 173/513 (33%), Positives = 291/513 (56%), Gaps = 33/513 (6%)
Query: 67 LFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEE 126
+F+R+P +LW +I GY + + V+ +++ +
Sbjct: 65 VFERVPSPGTYLWNHLIKGY-------------------SNKFLFFETVSILMRMMRTGL 105
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRI 186
A Y P N +G R G + L + R +++VV + + +C +
Sbjct: 106 ARPDEYTFPLVMKVCSN---NGQVRVGSSVHGL-VLRIGFDKDVVVGTSFVDFYGKCKDL 161
Query: 187 EDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNR 246
A+ F +M ER+ SWT +V +G +++A+ +FD MP RN+ SWN ++ G K+
Sbjct: 162 FSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSG 221
Query: 247 RLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQ 306
L A +LF+ MP+RD+ S+ +++ G+ + GD+ A LF E +V W+A++ GY Q
Sbjct: 222 DLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQ 281
Query: 307 HGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI----HQLISKTAFQ 362
+G EA K+F+++ A + +KP+ V ++ ACS + +++ HQ ++K +
Sbjct: 282 NGQPNEAFKVFSEMCAKN-VKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFS-- 338
Query: 363 ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
S YVV ALI+M +KCG + A ++F+E + QRDL+S+ M+ A HG G EAI LF
Sbjct: 339 -SHYVVPALIDMNAKCGHMDRAAKLFEE--MPQRDLVSYCSMMEGMAIHGCGSEAIRLFE 395
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRA 482
KM + G ++V + +L C + LVEEGL+YF+ + K SI DHY+C+V+L R
Sbjct: 396 KMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRT 455
Query: 483 GRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLS 542
G+LKEA+ +I+ + + S WG LL GC++HGN +I ++VA+ + ++EP++AG+Y LLS
Sbjct: 456 GKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLS 515
Query: 543 NMYASVGKWKEAANVRMKMKDKGLKKQPGCSWV 575
N+YA++ +W + A++R KM + G+ K G SW+
Sbjct: 516 NIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 190/385 (49%), Gaps = 30/385 (7%)
Query: 64 ARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-GPDAMKDVVTWTALVNGYVKLN 122
ARK+F MPER+ W ++ Y+ G ++EA+ +FD P+ +++ +W ALV+G VK
Sbjct: 164 ARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPE--RNLGSWNALVDGLVKSG 221
Query: 123 QIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSE 182
+ A++LF EMP+R++ S+ +MIDGYA+ G A DLF +V +W+ +I ++
Sbjct: 222 DLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQ 281
Query: 183 CGRIEDAQWHFNQMRERDVKSWTTMVDGL----------AINGRVDD-ARELFDRMPVRN 231
G+ +A F++M ++VK ++ GL + +VD + ++
Sbjct: 282 NGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHY 341
Query: 232 VVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ 291
VV +I AK +D A +LFE MP+RD+ S+ +++ G +G + A +LF +M
Sbjct: 342 VVP--ALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVD 399
Query: 292 KNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLN 347
+ + + +T ++ Q L EE L+ F ++ +++ + + ++ S L
Sbjct: 400 EGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLK 459
Query: 348 EGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI----ARRIFDEGLLRQRDLISWNG 403
E ++LI F+ +L+ S G I AR +F+ L + S+
Sbjct: 460 EA---YELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFE---LEPQSAGSYVL 513
Query: 404 MIAAYAHHGYGKEAINLFNKMQELG 428
+ YA + +L +KM E G
Sbjct: 514 LSNIYAALDRWTDVAHLRDKMNENG 538
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 158/306 (51%), Gaps = 24/306 (7%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
N + L + G + +A+KLFD MP+RD+ + +MI+GY G + AR LF+ + DV
Sbjct: 211 NALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEARGV-DV 269
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER 168
W+AL+ GY + Q EA ++F EM +NV+ ++ G +L ++
Sbjct: 270 RAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSY 329
Query: 169 -----NVVSWNTIIKAL----SECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDD 219
N S + ++ AL ++CG ++ A F +M +RD+ S+ +M++G+AI+G +
Sbjct: 330 LHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSE 389
Query: 220 ARELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPER-----DMPSWNTLV 270
A LF++M V + V++ V++K ++R ++E L FE M ++ ++ +V
Sbjct: 390 AIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIV 449
Query: 271 TGFIQNGDLNRAEKLFHEMP-QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
+ G L A +L MP + + W +++ G HG +E A + L L+P
Sbjct: 450 NLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHL---FELEPQ 506
Query: 330 T-GTFV 334
+ G++V
Sbjct: 507 SAGSYV 512
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 316 bits (810), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 184/555 (33%), Positives = 298/555 (53%), Gaps = 84/555 (15%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE----RNVVSWNTIIKALSE 182
A +F + E N+ WNTM G+A + AL L+ M N ++ ++K+ ++
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAK 146
Query: 183 C-----------------------------------GRIEDAQWHFNQMRERDVKSWTTM 207
GR+EDA F++ RDV S+T +
Sbjct: 147 SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTAL 206
Query: 208 VDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSW 266
+ G A G +++A++LFD +PV++VVSWN MI GYA+ EALELF+ M + ++ P
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
Query: 267 NTLVT------------------------GFIQN--------------GDLNRAEKLFHE 288
+T+VT GF N G+L A LF
Sbjct: 267 STMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFER 326
Query: 289 MPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
+P K+VI+W ++ GY L +EAL +F ++ PN T +++L AC+ L ++
Sbjct: 327 LPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS-GETPNDVTMLSILPACAHLGAIDI 385
Query: 349 GQQIHQLISK--TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIA 406
G+ IH I K ++ + ++LI+MY+KCG++ A ++F+ L + L SWN MI
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL--HKSLSSWNAMIF 443
Query: 407 AYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQ 466
+A HG + +LF++M+++G Q +D+T+V LL+ACSH+G+++ G F + ++ +
Sbjct: 444 GFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMT 503
Query: 467 VREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKK 526
+ +HY C++DL G +G KEA +I + ++ +W LL C +HGN ++G+ A+
Sbjct: 504 PKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAEN 563
Query: 527 ILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVV 586
++KIEPEN G+Y LLSN+YAS G+W E A R + DKG+KK PGCS +E+ + V F++
Sbjct: 564 LIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFII 623
Query: 587 GDKSHSQS-ELLGYL 600
GDK H ++ E+ G L
Sbjct: 624 GDKFHPRNREIYGML 638
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 97/343 (28%), Positives = 160/343 (46%), Gaps = 57/343 (16%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTW 111
IS Q GR++DA K+FD+ P RD+ + +I GY G I+ A+KLFD +KDVV+W
Sbjct: 176 ISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFD-EIPVKDVVSW 234
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRS--------------------------W--- 142
A+++GY + +EA LF +M + NVR W
Sbjct: 235 NAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDD 294
Query: 143 ----------NTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWH 192
N +ID Y++ G+ E A LF R+P ++V+SWNT+I + ++A
Sbjct: 295 HGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLL 354
Query: 193 FNQM-RERDVKSWTTMVDGL---AINGRVDDARELFDRMP-----VRNVVSWNV-MIKGY 242
F +M R + + TM+ L A G +D R + + V N S +I Y
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMY 414
Query: 243 AKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP----QKNVITWT 298
AK ++ A ++F + + + SWN ++ GF +G + + LF M Q + IT+
Sbjct: 415 AKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFV 474
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKP---NTGTFVTVLG 338
+++ G+ + IF + D+ + P + G + +LG
Sbjct: 475 GLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 124/295 (42%), Gaps = 69/295 (23%)
Query: 248 LDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQH 307
L A+ +F+ + E ++ WNT+ G + D A KL+ M++
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLY-----------VCMIS----- 127
Query: 308 GLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYV 367
L PN+ TF VL +C+ EGQQIH + K YV
Sbjct: 128 ----------------LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 368 VSALINMYSKCGELHIARRIFDEGLLRQ-----------------------------RDL 398
++LI+MY + G L A ++FD+ R +D+
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 399 ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ---Y 455
+SWN MI+ YA G KEA+ LF M + + ++ T V +++AC+ +G +E G Q +
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 456 FDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
D ++++ L+DL + G L+ A + E L +S W L+ G
Sbjct: 292 IDDHGFGSNLKIVN----ALIDLYSKCGELETACGLFERLPYKDVIS-WNTLIGG 341
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 192/612 (31%), Positives = 310/612 (50%), Gaps = 92/612 (15%)
Query: 55 LCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DGPDAMKDVV 109
LC G I ARKLF+ MP+ L + +I Y+ G+ +A +F +G + D
Sbjct: 61 LC--GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 110 TW-----------------------------------TALVNGYVKLNQIEEAERLFYEM 134
T+ AL+ Y+ ++E A +F M
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 135 PERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSECGRIEDAQWHF 193
R+V SWNTMI GY RNG AL +F M +V + TI+ L CG ++D +
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 194 N------QMRERD-VKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNR 246
N + R D ++ +V+ GR+D+AR +FDRM R+V++W MI GY ++
Sbjct: 239 NVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDG 298
Query: 247 RLDEALELFERMP---------------------------------------ERDMPSWN 267
++ ALEL M D+
Sbjct: 299 DVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIET 358
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
+L++ + + ++ ++F + + W+A++ G VQ+ L +AL +F +++ + ++
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRED-VE 417
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
PN T ++L A + LA L + IH ++KT F S + L+++YSKCG L A +I
Sbjct: 418 PNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKI 477
Query: 388 FD--EGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
F+ + + +D++ W +I+ Y HG G A+ +F +M G N++T+ L ACSH
Sbjct: 478 FNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSH 537
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWG 505
+GLVEEGL F +L++ R +HY C+VDL GRAGRL EA+N+I + + + +VWG
Sbjct: 538 SGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWG 597
Query: 506 PLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 565
LLA C H N +G++ A K+ ++EPEN G Y LL+N+YA++G+WK+ VR M++ G
Sbjct: 598 ALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVG 657
Query: 566 LKKQPGCSWVEV 577
L+K+PG S +E+
Sbjct: 658 LRKKPGHSTIEI 669
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 116/501 (23%), Positives = 206/501 (41%), Gaps = 90/501 (17%)
Query: 103 DAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS---WNTMIDGYARNGQTEKAL 159
+A+ V + +L+N + I + + L + S +T+ YA G A
Sbjct: 10 NALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVTYALCGHITYAR 69
Query: 160 DLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKS---------------- 203
LF MP+ +++S+N +I+ G DA F +M VK
Sbjct: 70 KLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGE 129
Query: 204 WTTMVDGLAINGR-------------------------VDDARELFDRMPVRNVVSWNVM 238
+M GL ++GR V+ AR++FD M R+V+SWN M
Sbjct: 130 LKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTM 189
Query: 239 IKGYAKNRRLDEALELFERMPERD-----------MPSW--------------------- 266
I GY +N +++AL +F+ M +P
Sbjct: 190 ISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRL 249
Query: 267 -------NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
N LV +++ G ++ A +F M +++VITWT M+ GY + G E AL++
Sbjct: 250 GDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRL 309
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
+Q + ++PN T +++ C D +N+G+ +H + + ++LI+MY+KC
Sbjct: 310 MQFE-GVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 380 ELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
+ + R+F + W+ +IA + +A+ LF +M+ + N T L
Sbjct: 369 RVDLCFRVFSGA--SKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSL 426
Query: 440 LTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLG--- 496
L A + + + + L K D LV + + G L+ A I G+
Sbjct: 427 LPAYAALADLRQAMNIHCYLTKT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKH 485
Query: 497 VDLSLSVWGPLLAGCNVHGNA 517
+ +WG L++G +HG+
Sbjct: 486 KSKDVVLWGALISGYGMHGDG 506
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 165/408 (40%), Gaps = 97/408 (23%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL-----FDG-- 101
N ++ + GR+D+AR +FDRM RD+ W MINGY G ++ A +L F+G
Sbjct: 257 NALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVR 316
Query: 102 -------------PDAMK------------------DVVTWTALVNGYVKLNQIEEAERL 130
DA+K D++ T+L++ Y K +++ R+
Sbjct: 317 PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRV 376
Query: 131 FYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKA------- 179
F + + W+ +I G +N AL LF+RM E N+ + N+++ A
Sbjct: 377 FSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADL 436
Query: 180 ----------------------------LSECGRIEDAQWHFNQMRE----RDVKSWTTM 207
S+CG +E A FN ++E +DV W +
Sbjct: 437 RQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGAL 496
Query: 208 VDGLAINGRVDDARELFDRMPVR-----NVVSWNVMIKGYAKNRRLDEALELFERMPERD 262
+ G ++G +A ++F M VR N +++ + + + ++E L LF M E
Sbjct: 497 ISGYGMHGDGHNALQVFMEM-VRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHY 555
Query: 263 MP-----SWNTLVTGFIQNGDLNRAEKLFHEMP-QKNVITWTAMMTGYVQHGLSEEALKI 316
+ +V + G L+ A L +P + W A++ V H +
Sbjct: 556 KTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMA 615
Query: 317 FNKLQADHALKP-NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQE 363
NKL L+P NTG +V + + L + +++ ++ ++
Sbjct: 616 ANKL---FELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRK 660
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 188/626 (30%), Positives = 306/626 (48%), Gaps = 111/626 (17%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-GPDAMKDVVTWTALV 115
+ G++ AR LFD MP+R+ W TMI GY+ G + + FD P+ +D +W +V
Sbjct: 74 RSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE--RDGYSWNVVV 131
Query: 116 NGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP-ERNVVSWN 174
+G+ K ++ A RLF MPE++V + N+++ GY NG E+AL LF+ + + ++
Sbjct: 132 SGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLT 191
Query: 175 TIIKALSE-----------------------------------CGRIEDAQWHFNQMRER 199
T++KA +E CG + A + Q+RE
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 200 DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP 259
D S + ++ G A GRV+++R LFDR R V+ WN MI GY N EAL LF M
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR 311
Query: 260 ER--------------------------------------DMPSWNTLVTGFIQNGDLNR 281
D+ +TL+ + + G
Sbjct: 312 NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPME 371
Query: 282 AEKLFHEMPQKNVI-------------------------------TWTAMMTGYVQHGLS 310
A KLF E+ + I +W +M G+ Q+G +
Sbjct: 372 ACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCT 431
Query: 311 EEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSA 370
E L+ F+++ L + + +V+ AC+ ++ L G+Q+ + V S+
Sbjct: 432 VETLEYFHQMH-KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSS 490
Query: 371 LINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
LI++Y KCG + RR+FD + + D + WN MI+ YA +G G EAI+LF KM G +
Sbjct: 491 LIDLYCKCGFVEHGRRVFDT--MVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIR 548
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFN 490
+T++ +LTAC++ GLVEEG + F+ + + ++H++C+VDL RAG ++EA N
Sbjct: 549 PTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAIN 608
Query: 491 IIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGK 550
++E + D+ S+W +L GC +G +GK A+KI+++EPEN+ Y LS ++A+ G
Sbjct: 609 LVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGD 668
Query: 551 WKEAANVRMKMKDKGLKKQPGCSWVE 576
W+ +A VR M++ + K PG SW +
Sbjct: 669 WESSALVRKLMRENNVTKNPGSSWTD 694
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 124/477 (25%), Positives = 220/477 (46%), Gaps = 77/477 (16%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
V+ L+ Y + ++ A LF EMP+RN SWNTMI+GY +G+ +L F MPE
Sbjct: 62 VIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPE 121
Query: 168 RNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELF--- 224
R+ SWN ++ ++ G + A+ FN M E+DV + +++ G +NG ++A LF
Sbjct: 122 RDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL 181
Query: 225 ----DRMPVRNV---------------VSWNVMIKG--------------YAKNRRLDEA 251
D + + V + ++I G YAK L A
Sbjct: 182 NFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMA 241
Query: 252 LELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSE 311
+ E++ E D S + L++G+ G +N + LF + VI W +M++GY+ + +
Sbjct: 242 SYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKM 301
Query: 312 EALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
EAL +FN+++ + + ++ T V+ AC L L G+Q+H K + V S L
Sbjct: 302 EALVLFNEMR--NETREDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTL 359
Query: 372 INMYSKCGE-------------------------------LHIARRIFDEGLLRQRDLIS 400
++MYSKCG + A+R+F+ + + LIS
Sbjct: 360 LDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFER--IENKSLIS 417
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDK-- 458
WN M ++ +G E + F++M +L ++V+ +++AC+ +E G Q F +
Sbjct: 418 WNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARAT 477
Query: 459 LLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
++ S QV + L+DL + G ++ + + + V W +++G +G
Sbjct: 478 IVGLDSDQVVS---SSLIDLYCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATNG 530
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 103/227 (45%), Gaps = 17/227 (7%)
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSA-LINMYSKCGELHIARRIFDEG 391
+V +L +CS +Q + L+ K F S +V+ L+ MYS+ G++ IAR +FDE
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDE- 87
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL-GFQANDVTYVELLTACSHAGLVE 450
+ R+ SWN MI Y + G ++ F+ M E G+ N V ++ + AG +
Sbjct: 88 -MPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVV-----VSGFAKAGELS 141
Query: 451 EGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
+ F+ + + + + + +++ G +EA + + L +L
Sbjct: 142 VARRLFNAMPEKDVVTLNSLLHGYILN-----GYAEEALRLFKELNFSADAITLTTVLKA 196
Query: 511 CNVHGNADIGKLVAKKIL--KIEPENAGTYSLLSNMYASVGKWKEAA 555
C GK + +IL +E ++ SL+ N+YA G + A+
Sbjct: 197 CAELEALKCGKQIHAQILIGGVECDSKMNSSLV-NVYAKCGDLRMAS 242
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 199/644 (30%), Positives = 328/644 (50%), Gaps = 98/644 (15%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-------PDAM---- 105
++G ID AR +FD +PE+ W TMI+G + G + +LF PD
Sbjct: 195 KDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILST 254
Query: 106 ---------------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPERN 138
D L++ YVK ++ A +LF MP +N
Sbjct: 255 VLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMPE----RNVVSWNTIIKALSECGRIE----DAQ 190
+ SW T++ GY +N ++A++LF M + ++ + ++I L+ C + Q
Sbjct: 315 IISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSI---LTSCASLHALGFGTQ 371
Query: 191 WHFNQMRER---DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAK--- 244
H ++ D +++D A + DAR++FD +VV +N MI+GY++
Sbjct: 372 VHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGT 431
Query: 245 NRRLDEALELFERMPERDM-PSWNTLVT------------------GFIQNGDLN----- 280
L EAL +F M R + PS T V+ G + LN
Sbjct: 432 QWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFA 491
Query: 281 ---------------RAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHA 325
+ +F EM K+++ W +M GYVQ +EEAL +F +LQ
Sbjct: 492 GSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRE 551
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
+P+ TF ++ A +LA + GQ+ H + K + + Y+ +AL++MY+KCG A
Sbjct: 552 -RPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAH 610
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
+ FD RD++ WN +I++YA+HG GK+A+ + KM G + N +T+V +L+ACSH
Sbjct: 611 KAFDSA--ASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSH 668
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWG 505
AGLVE+GL+ F+ +L+ I+ +HY C+V L GRAGRL +A +IE + + VW
Sbjct: 669 AGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWR 727
Query: 506 PLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 565
LL+GC GN ++ + A+ + +P+++G++++LSN+YAS G W EA VR +MK +G
Sbjct: 728 SLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Query: 566 LKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
+ K+PG SW+ + V +F+ DKSH ++ + +L DL +++
Sbjct: 788 VVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 152/587 (25%), Positives = 261/587 (44%), Gaps = 98/587 (16%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF--------D 100
N I+ + G + ARK+F++MPER+L W TM++ G+ +E+ +F D
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 101 GPDAM---------------------------------KDVVTWTALVNGYVKLNQIEEA 127
P+ +DV T L++ Y+K I+ A
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 128 ERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVS----WNTIIKALSEC 183
+F +PE++ +W TMI G + G++ +L LF ++ E NVV +T++ A S
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 184 GRIEDA-QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMI 239
+E Q H + +R E D ++D GRV A +LF+ MP +N++SW ++
Sbjct: 263 PFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLL 322
Query: 240 KGYAKNRRLDEALELFERMPE--------------------------------------- 260
GY +N EA+ELF M +
Sbjct: 323 SGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLG 382
Query: 261 RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLS---EEALKIF 317
D N+L+ + + L A K+F +V+ + AM+ GY + G EAL IF
Sbjct: 383 NDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIF 442
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
++ ++P+ TFV++L A + L L +QIH L+ K + SALI++YS
Sbjct: 443 RDMRF-RLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSN 501
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
C L +R +FDE ++ +DL+ WN M A Y +EA+NLF ++Q + ++ T+
Sbjct: 502 CYCLKDSRLVFDE--MKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFA 559
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGV 497
++TA + V+ G ++ +LLK R ++ L+D+ + G ++A +
Sbjct: 560 NMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMYAKCGSPEDAHKAFDS-AA 617
Query: 498 DLSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPENAGTYSLLS 542
+ W +++ HG + +K++ IEP +LS
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLS 664
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 120/253 (47%), Gaps = 6/253 (2%)
Query: 260 ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
E D N L+ + + G + A K+F +MP++N+++W+ M++ HG+ EE+L +F +
Sbjct: 76 ELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLE 135
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQ--QIHQLISKTAFQESTYVVSALINMYSK 377
PN + + ACS L G Q+ + K+ F YV + LI+ Y K
Sbjct: 136 FWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLK 195
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
G + AR +FD L ++ ++W MI+ G ++ LF ++ E +
Sbjct: 196 DGNIDYARLVFDA--LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILS 253
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGV 497
+L+ACS +E G Q +L+ +++ L+D + GR+ A + G+
Sbjct: 254 TVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMP- 311
Query: 498 DLSLSVWGPLLAG 510
+ ++ W LL+G
Sbjct: 312 NKNIISWTTLLSG 324
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 92/204 (45%), Gaps = 18/204 (8%)
Query: 47 DCNTSISR-----LCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD- 100
+CN I+ + G +DA K FD RD+ W ++I+ Y G K+A ++ +
Sbjct: 587 ECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEK 646
Query: 101 --GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM----PERNVRSWNTMIDGYARNGQ 154
+ +T+ +++ +E+ + F M E + M+ R G+
Sbjct: 647 MMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGR 706
Query: 155 TEKALDLFRRMPER-NVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVD 209
KA +L +MP + + W +++ ++ G +E A+ H +M +D S+T + +
Sbjct: 707 LNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE-HAAEMAILSDPKDSGSFTMLSN 765
Query: 210 GLAINGRVDDARELFDRMPVRNVV 233
A G +A+++ +RM V VV
Sbjct: 766 IYASKGMWTEAKKVRERMKVEGVV 789
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 286/510 (56%), Gaps = 10/510 (1%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
+D + +++ A +M E NV +N + G+ ++L+L+ RM
Sbjct: 803 QDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRM 862
Query: 166 PERNV----VSWNTIIKALSECGRI-EDAQWHFNQMR-ERDVKSWTTMVDGLAINGRVDD 219
+V ++++++KA S R E Q H + VK TT++D + GR+ +
Sbjct: 863 LRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIRE 922
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDL 279
AR++FD MP R+ ++W M+ Y + +D A L +M E++ + N L+ G++ G+L
Sbjct: 923 ARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNL 982
Query: 280 NRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
+AE LF++MP K++I+WT M+ GY Q+ EA+ +F K+ + + P+ T TV+ A
Sbjct: 983 EQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMM-EEGIIPDEVTMSTVISA 1041
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
C+ L L G+++H + F Y+ SAL++MYSKCG L A +F L +++L
Sbjct: 1042 CAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN--LPKKNLF 1099
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
WN +I A HG+ +EA+ +F KM+ + N VT+V + TAC+HAGLV+EG + + +
Sbjct: 1100 CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Query: 460 LKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADI 519
+ + SI +HY +V L +AG + EA +I + + + +WG LL GC +H N I
Sbjct: 1160 IDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVI 1219
Query: 520 GKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK-QPGCSWVEVG 578
++ K++ +EP N+G Y LL +MYA +W++ A +R +M++ G++K PG S + +
Sbjct: 1220 AEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRID 1279
Query: 579 NTVQVFVVGDKSHSQSELLGYLLLDLHTKM 608
+F DKSHS S+ + LL +++ +M
Sbjct: 1280 KRDHLFAAADKSHSASDEVCLLLDEIYDQM 1309
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 155/299 (51%), Gaps = 22/299 (7%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGY 118
GRI +ARK+FD MPERD W TM++ Y + A L + + K+ T L+NGY
Sbjct: 918 GRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQM-SEKNEATSNCLINGY 976
Query: 119 VKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWN 174
+ L +E+AE LF +MP +++ SW TMI GY++N + +A+ +F +M E + V+ +
Sbjct: 977 MGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMS 1036
Query: 175 TIIKALSECGRIE-DAQWHFNQMRE---RDVKSWTTMVDGLAINGRVDDARELFDRMPVR 230
T+I A + G +E + H ++ DV + +VD + G ++ A +F +P +
Sbjct: 1037 TVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK 1096
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMP-ERDMPSWNTLVTGF---IQNGDLNRAEKLF 286
N+ WN +I+G A + EAL++F +M E P+ T V+ F G ++ +++
Sbjct: 1097 NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY 1156
Query: 287 HEMPQ-----KNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC 340
M NV + M+ + + GL EAL++ ++ +PN + +L C
Sbjct: 1157 RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNME----FEPNAVIWGALLDGC 1211
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 183/364 (50%), Gaps = 19/364 (5%)
Query: 81 TMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNV 139
T+I+ Y G I+EARK+FD P+ +D + WT +V+ Y ++ ++ A L +M E+N
Sbjct: 909 TLIDFYSATGRIREARKVFDEMPE--RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNE 966
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER 199
+ N +I+GY G E+A LF +MP ++++SW T+IK S+ R +A F +M E
Sbjct: 967 ATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE 1026
Query: 200 ----DVKSWTTMVDGLAINGRVDDAREL----FDRMPVRNVVSWNVMIKGYAKNRRLDEA 251
D + +T++ A G ++ +E+ V +V + ++ Y+K L+ A
Sbjct: 1027 GIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERA 1086
Query: 252 LELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQH 307
L +F +P++++ WN+++ G +G A K+F +M + N +T+ ++ T
Sbjct: 1087 LLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHA 1146
Query: 308 GLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYV 367
GL +E +I+ + D+++ N + ++ S + E +LI F+ + +
Sbjct: 1147 GLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEAL---ELIGNMEFEPNAVI 1203
Query: 368 VSALINMYSKCGELHIARRIFDEGL-LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE 426
AL++ L IA F++ + L + + +++ YA ++ + +M+E
Sbjct: 1204 WGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRE 1263
Query: 427 LGFQ 430
LG +
Sbjct: 1264 LGIE 1267
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 179/555 (32%), Positives = 291/555 (52%), Gaps = 54/555 (9%)
Query: 107 DVVTWTALVNGYVK-LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
DV +L++ +VK N E A ++F +M E NV +W MI + G +A+ F M
Sbjct: 201 DVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDM 260
Query: 166 PERNVVSWN-TIIKALSECGRIEDAQ-------WHFNQMRERDVK-SWTTMVDGLAINGR 216
S T+ S C +E+ W DV+ S M + +G
Sbjct: 261 VLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSLVDMYAKCSADGS 320
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRL-DEALELFERMP---------------- 259
VDD R++FDRM +V+SW +I GY KN L EA+ LF M
Sbjct: 321 VDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAF 380
Query: 260 --------------------ERDMPS----WNTLVTGFIQNGDLNRAEKLFHEMPQKNVI 295
+R + S N++++ F+++ + A++ F + +KN++
Sbjct: 381 KACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLV 440
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
++ + G ++ E+A K+ +++ + L + TF ++L +++ + +G+QIH
Sbjct: 441 SYNTFLDGTCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVANVGSIRKGEQIHSQ 499
Query: 356 ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK 415
+ K + V +ALI+MYSKCG + A R+F+ + R++ISW MI +A HG+
Sbjct: 500 VVKLGLSCNQPVCNALISMYSKCGSIDTASRVFN--FMENRNVISWTSMITGFAKHGFAI 557
Query: 416 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACL 475
+ FN+M E G + N+VTYV +L+ACSH GLV EG ++F+ + ++ I+ + +HYAC+
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 476 VDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENA 535
VDL RAG L +AF I + + VW L C VH N ++GKL A+KIL+++P
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
Y LSN+YA GKW+E+ +R KMK++ L K+ GCSW+EVG+ + F VGD +H +
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 596 LLGYLLLDLHTKMKK 610
+ L L T++K+
Sbjct: 738 QIYDELDRLITEIKR 752
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 194/427 (45%), Gaps = 27/427 (6%)
Query: 167 ERNVVSWNTIIKALSECGRIEDAQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDAREL 223
E + V +N++I S+ G A+ F MR +RDV SW+ M+ NGR DA ++
Sbjct: 94 EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKV 153
Query: 224 FDRM----PVRNVVSWNVMIKGYAKNR-----RLDEALELFERMPERDMPSWNTLVTGFI 274
F V N + +I+ + + R+ + E D+ +L+ F+
Sbjct: 154 FVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFV 213
Query: 275 Q-NGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
+ A K+F +M + NV+TWT M+T +Q G EA++ F + + + T
Sbjct: 214 KGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS-GFESDKFTL 272
Query: 334 VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC---GELHIARRIFDE 390
+V AC++L L+ G+Q+H ++ + V +L++MY+KC G + R++FD
Sbjct: 273 SSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDR 330
Query: 391 GLLRQRDLISWNGMIAAYAHH-GYGKEAINLFNKMQELG-FQANDVTYVELLTACSHAGL 448
+ ++SW +I Y + EAINLF++M G + N T+ AC +
Sbjct: 331 --MEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSD 388
Query: 449 VEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLL 508
G Q + K R + ++ + ++ R+++A E L + +L + L
Sbjct: 389 PRVGKQVLGQAFK-RGLASNSSVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFL 446
Query: 509 AG-CNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
G C KL+++ + +A T++ L + A+VG ++ + ++ GL
Sbjct: 447 DGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLS 506
Query: 568 -KQPGCS 573
QP C+
Sbjct: 507 CNQPVCN 513
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 99/196 (50%), Gaps = 6/196 (3%)
Query: 320 LQADHALKP-NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
L A ++P ++ TF ++L +C G+ +H + + + + + ++LI++YSK
Sbjct: 51 LMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKS 110
Query: 379 GELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
G+ A +F E + R +RD++SW+ M+A Y ++G +AI +F + ELG ND Y
Sbjct: 111 GDSAKAEDVF-ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCY 169
Query: 437 VELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRA-GRLKEAFNIIEGL 495
++ ACS++ V G L+K + L+D+ + + A+ + + +
Sbjct: 170 TAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKM 229
Query: 496 GVDLSLSVWGPLLAGC 511
+L++ W ++ C
Sbjct: 230 S-ELNVVTWTLMITRC 244
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 191/666 (28%), Positives = 320/666 (48%), Gaps = 128/666 (19%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKD 107
N + L + G++ ARK++D MP ++ TMI+G++ G + AR LFD PD +
Sbjct: 52 NFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPD--RT 109
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEM-------------------------PERNV--- 139
VVTWT L+ Y + + +EA +LF +M P+ V
Sbjct: 110 VVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQV 169
Query: 140 ---------------RSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECG 184
N ++ Y + + A LF +PE++ V++NT+I + G
Sbjct: 170 HAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDG 229
Query: 185 RIEDAQWHFNQMRE---------------------------------------RDVKSWT 205
++ F +MR+ RD
Sbjct: 230 LYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGN 289
Query: 206 TMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP-----E 260
++D + + RV + R LFD MP + VS+NV+I Y++ + + +L F M
Sbjct: 290 QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDR 349
Query: 261 RDMP----------------------------------SWNTLVTGFIQNGDLNRAEKLF 286
R+ P N+LV + + AE +F
Sbjct: 350 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 409
Query: 287 HEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGL 346
+PQ+ ++WTA+++GYVQ GL LK+F K++ + L+ + TF TVL A + A L
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN-LRADQSTFATVLKASASFASL 468
Query: 347 NEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIA 406
G+Q+H I ++ E+ + S L++MY+KCG + A ++F+E + R+ +SWN +I+
Sbjct: 469 LLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE--MPDRNAVSWNALIS 526
Query: 407 AYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQ 466
A+A +G G+ AI F KM E G Q + V+ + +LTACSH G VE+G +YF + I
Sbjct: 527 AHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGIT 586
Query: 467 VREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKK 526
++ HYAC++DL GR GR EA +++ + + +W +L C +H N + + A+K
Sbjct: 587 PKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEK 646
Query: 527 ILKIEP-ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFV 585
+ +E +A Y +SN+YA+ G+W++ +V+ M+++G+KK P SWVEV + + VF
Sbjct: 647 LFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFS 706
Query: 586 VGDKSH 591
D++H
Sbjct: 707 SNDQTH 712
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 138/522 (26%), Positives = 228/522 (43%), Gaps = 92/522 (17%)
Query: 94 EARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNG 153
+AR + G D D +V ++ Q+ A +++ EMP +N S NTMI G+ + G
Sbjct: 36 DARIIKTGFDT--DTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93
Query: 154 QTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER------DVKSWTTM 207
A DLF MP+R VV+W ++ + ++A F QM D ++TT+
Sbjct: 94 DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153
Query: 208 VDGL-------AINGRVDDAREL-FDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP 259
+ G A+ A +L FD P V NV++K Y + RRLD A LFE +P
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVS--NVLLKSYCEVRRLDLACVLFEEIP 211
Query: 260 ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
E+D ++NTL+TG Y + GL E++ +F K
Sbjct: 212 EKDSVTFNTLITG-------------------------------YEKDGLYTESIHLFLK 240
Query: 320 L-QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
+ Q+ H +P+ TF VL A L GQQ+H L T F V + +++ YSK
Sbjct: 241 MRQSGH--QPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 379 GELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVE 438
+ R +FDE + + D +S+N +I++Y+ + +++ F +MQ +GF + +
Sbjct: 299 DRVLETRMLFDE--MPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFAT 356
Query: 439 LLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVD 498
+L+ ++ ++ G Q + L + + + LVD+ + +EA I + L
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILHVGNS-LVDMYAKCEMFEEAELIFKSLPQR 415
Query: 499 LSLSVWGPLLAGC---NVHG---------------------------NADIGKLVAKKIL 528
++S W L++G +HG +A L+ K L
Sbjct: 416 TTVS-WTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQL 474
Query: 529 KI------EPENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 564
EN + S L +MYA G K+A V +M D+
Sbjct: 475 HAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDR 516
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 133/250 (53%), Gaps = 11/250 (4%)
Query: 196 MRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELF 255
+R+ S T +D ++ R+ + FD R+ N +++ + ++ A +++
Sbjct: 18 LRQLRQPSPATFLDTRRVDARI--IKTGFDTDTCRS----NFIVEDLLRRGQVSAARKVY 71
Query: 256 ERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
+ MP ++ S NT+++G ++ GD++ A LF MP + V+TWT +M Y ++ +EA K
Sbjct: 72 DEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFK 131
Query: 316 IFNKL-QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTY--VVSALI 372
+F ++ ++ P+ TF T+L C+D N Q+H K F + + V + L+
Sbjct: 132 LFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLL 191
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
Y + L +A +F+E + ++D +++N +I Y G E+I+LF KM++ G Q +
Sbjct: 192 KSYCEVRRLDLACVLFEE--IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPS 249
Query: 433 DVTYVELLTA 442
D T+ +L A
Sbjct: 250 DFTFSGVLKA 259
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 153/368 (41%), Gaps = 71/368 (19%)
Query: 34 MSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIK 93
++T+ S LH N+ + + ++A +F +P+R W +I+GY+ G+
Sbjct: 379 LATADSILHVG----NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHG 434
Query: 94 EARKLFDG--------------------------------------PDAMKDVVTWTALV 115
KLF +++V + + LV
Sbjct: 435 AGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLV 494
Query: 116 NGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----V 171
+ Y K I++A ++F EMP+RN SWN +I +A NG E A+ F +M E + V
Sbjct: 495 DMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSV 554
Query: 172 SWNTIIKALSECGRIEDAQWHFNQMR-----ERDVKSWTTMVDGLAINGRVDDARELFDR 226
S ++ A S CG +E +F M K + M+D L NGR +A +L D
Sbjct: 555 SILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDE 614
Query: 227 MPVR-NVVSWNVMIKG--YAKNRRLDE--ALELFERMPERDMPSWNTLVTGFIQNGD--- 278
MP + + W+ ++ KN+ L E A +LF RD ++ ++ + G+
Sbjct: 615 MPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLS---------EEALKIFNKLQAD---HAL 326
+ +K E K V ++ + + H S +E ++ N+L A+
Sbjct: 675 VRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGY 734
Query: 327 KPNTGTFV 334
KP+T + V
Sbjct: 735 KPDTSSVV 742
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 162/472 (34%), Positives = 270/472 (57%), Gaps = 11/472 (2%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV-----SWNTIIKALS 181
A RL PE + +NT++ GY+ + + ++ +F M + V S+ +IKA+
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 182 ECGRIEDA-QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV 237
+ Q H ++ E + TT++ G V+ AR++FD M N+V+WN
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 238 MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITW 297
+I + + A E+F++M R+ SWN ++ G+I+ G+L A+++F EMP ++ ++W
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
+ M+ G +G E+ F +LQ + PN + VL ACS G+ +H +
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRA-GMSPNEVSLTGVLSACSQSGSFEFGKILHGFVE 296
Query: 358 KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEA 417
K + V +ALI+MYS+CG + +AR +F EG+ +R ++SW MIA A HG G+EA
Sbjct: 297 KAGYSWIVSVNNALIDMYSRCGNVPMARLVF-EGMQEKRCIVSWTSMIAGLAMHGQGEEA 355
Query: 418 INLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD 477
+ LFN+M G + ++++ LL ACSHAGL+EEG YF ++ + I+ +HY C+VD
Sbjct: 356 VRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 478 LCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGT 537
L GR+G+L++A++ I + + + VW LL C+ HGN ++ + V +++ +++P N+G
Sbjct: 416 LYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGD 475
Query: 538 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDK 589
LLSN YA+ GKWK+ A++R M + +KK S VEVG T+ F G+K
Sbjct: 476 LVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEK 527
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 186/414 (44%), Gaps = 53/414 (12%)
Query: 64 ARKLFDRMPERDLHLWGTMINGYI--------MCGVIKEARKLFDGPDAMK--------- 106
AR+L PE D ++ T++ GY + ++ RK F PD+
Sbjct: 58 ARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVE 117
Query: 107 ----------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT 144
+ T L+ Y +E A ++F EM + N+ +WN
Sbjct: 118 NFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNA 177
Query: 145 MIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSW 204
+I R A ++F +M RN SWN ++ + G +E A+ F++M RD SW
Sbjct: 178 VITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSW 237
Query: 205 TTMVDGLAINGRVDDA----RELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE 260
+TM+ G+A NG +++ REL N VS ++ +++ E ++ E
Sbjct: 238 STMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSF-EFGKILHGFVE 296
Query: 261 RDMPSW-----NTLVTGFIQNGDLNRAEKLFHEMPQKN-VITWTAMMTGYVQHGLSEEAL 314
+ SW N L+ + + G++ A +F M +K +++WT+M+ G HG EEA+
Sbjct: 297 KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAV 356
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYV-VSALIN 373
++FN++ A + + P+ +F+++L ACS + EG+ + + E +++
Sbjct: 357 RLFNEMTA-YGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVD 415
Query: 374 MYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL 427
+Y + G+L A + + ++ W ++ A + HG + A + ++ EL
Sbjct: 416 LYGRSGKLQKAYDFICQMPIPPTAIV-WRTLLGACSSHGNIELAEQVKQRLNEL 468
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 160/341 (46%), Gaps = 26/341 (7%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGY 118
G ++ ARK+FD M + +L W +I + AR++FD +++ +W ++ GY
Sbjct: 155 GCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFD-KMLVRNHTSWNVMLAGY 213
Query: 119 VKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWN 174
+K ++E A+R+F EMP R+ SW+TMI G A NG ++ FR + N VS
Sbjct: 214 IKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLT 273
Query: 175 TIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAIN-----GRVDDARELFDRM-P 228
++ A S+ G E + + E+ SW V+ I+ G V AR +F+ M
Sbjct: 274 GVLSACSQSGSFEFGKI-LHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 229 VRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEK 284
R +VSW MI G A + + +EA+ LF M D S+ +L+ G + E
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGED 392
Query: 285 LFHEMP-----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
F EM + + + M+ Y + G ++A ++ + P + T+LGA
Sbjct: 393 YFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQM----PIPPTAIVWRTLLGA 448
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
CS + +Q+ Q +++ S +V L N Y+ G+
Sbjct: 449 CSSHGNIELAEQVKQRLNELDPNNSGDLV-LLSNAYATAGK 488
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 152/341 (44%), Gaps = 32/341 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
N I+ + + AR++FD+M R+ W M+ GYI G ++ A+++F +D
Sbjct: 176 NAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFS-EMPHRDD 234
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRR 164
V+W+ ++ G E+ F E+ N S ++ +++G E +
Sbjct: 235 VSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFG-KILHG 293
Query: 165 MPERNVVSW-----NTIIKALSECGRIEDAQWHFNQMRE-RDVKSWTTMVDGLAINGRVD 218
E+ SW N +I S CG + A+ F M+E R + SWT+M+ GLA++G+ +
Sbjct: 294 FVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGE 353
Query: 219 DARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMP-----ERDMPSWNTL 269
+A LF+ M V +S+ ++ + ++E + F M E ++ + +
Sbjct: 354 EAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCM 413
Query: 270 VTGFIQNGDLNRAEKLFHEMP-QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
V + ++G L +A +MP I W ++ HG E A ++ +L + L P
Sbjct: 414 VDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRL---NELDP 470
Query: 329 NTGTFVTVL-------GACSDLAGLNEGQQIHQLISKTAFQ 362
N + +L G D+A + + + ++ TA+
Sbjct: 471 NNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWS 511
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 136/321 (42%), Gaps = 72/321 (22%)
Query: 248 LDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI------------ 295
L A L PE D +NTLV G+ ++ + + + +F EM +K +
Sbjct: 55 LPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIK 114
Query: 296 ---TWTAMMTGYVQH-------------------------GLSEEALKIFNKLQADHALK 327
+ ++ TG+ H G E A K+F+++ +
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH-----Q 169
Query: 328 PNTGTFVTVLGAC---SDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIA 384
PN + V+ AC +D+AG E + K + T + ++ Y K GEL A
Sbjct: 170 PNLVAWNAVITACFRGNDVAGARE------IFDKMLVRNHT-SWNVMLAGYIKAGELESA 222
Query: 385 RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACS 444
+RIF E + RD +SW+ MI AH+G E+ F ++Q G N+V+ +L+ACS
Sbjct: 223 KRIFSE--MPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACS 280
Query: 445 HAGLVEEGLQYFDKLLKNRSIQVREDHYA-------CLVDLCGRAGRLKEAFNIIEGLGV 497
+G E F K+L V + Y+ L+D+ R G + A + EG+
Sbjct: 281 QSGSFE-----FGKILHGF---VEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE 332
Query: 498 DLSLSVWGPLLAGCNVHGNAD 518
+ W ++AG +HG +
Sbjct: 333 KRCIVSWTSMIAGLAMHGQGE 353
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 164/469 (34%), Positives = 268/469 (57%), Gaps = 38/469 (8%)
Query: 176 IIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSW 235
+I+ S ++ A F+ + +V +T M+DG +GR D L+ RM +V+
Sbjct: 67 LIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPD 126
Query: 236 NVMIKG-----------------------------------YAKNRRLDEALELFERMPE 260
N +I Y K+ L A ++F+ MP+
Sbjct: 127 NYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPD 186
Query: 261 RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKL 320
RD + ++ + + G + A +LF ++ K+ + WTAM+ G V++ +AL++F ++
Sbjct: 187 RDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREM 246
Query: 321 QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
Q ++ + N T V VL ACSDL L G+ +H + + S +V +ALINMYS+CG+
Sbjct: 247 QMEN-VSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGD 305
Query: 381 LHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
++ ARR+F ++R +D+IS+N MI+ A HG EAIN F M GF+ N VT V LL
Sbjct: 306 INEARRVFR--VMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALL 363
Query: 441 TACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLS 500
ACSH GL++ GL+ F+ + + +++ + +HY C+VDL GR GRL+EA+ IE + ++
Sbjct: 364 NACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPD 423
Query: 501 LSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMK 560
+ G LL+ C +HGN ++G+ +AK++ + E ++GTY LLSN+YAS GKWKE+ +R
Sbjct: 424 HIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRES 483
Query: 561 MKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
M+D G++K+PGCS +EV N + F+VGD +H E + L +L+ ++
Sbjct: 484 MRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILR 532
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 29/379 (7%)
Query: 54 RLCQE-GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWT 112
R+C +D A +F + +++L+ MI+G++ G + DG ++ +
Sbjct: 69 RVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG------RSADGVSLYHRMIHNS 122
Query: 113 ALVNGYV--------KLNQIEEAERLFYEMPERNVRSWN-TMIDGYARNGQTEKALDLFR 163
L + YV L E ++ + RS M++ Y ++G+ A +F
Sbjct: 123 VLPDNYVITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFD 182
Query: 164 RMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDAREL 223
MP+R+ V+ +I SECG I++A F ++ +D WT M+DGL N ++ A EL
Sbjct: 183 EMPDRDHVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALEL 242
Query: 224 FDRMPVRNVVSWNVMIKGYAKNRRLDEALEL------FERMPERDMPSW--NTLVTGFIQ 275
F M + NV + ALEL F ++ ++ N L+ + +
Sbjct: 243 FREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSR 302
Query: 276 NGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVT 335
GD+N A ++F M K+VI++ M++G HG S EA+ F + + +PN T V
Sbjct: 303 CGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDM-VNRGFRPNQVTLVA 361
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAFQESTYV--VSALINMYSKCGELHIARRIFDEGLL 393
+L ACS L+ G ++ + K F + ++++ + G L A R F E +
Sbjct: 362 LLNACSHGGLLDIGLEVFNSM-KRVFNVEPQIEHYGCIVDLLGRVGRLEEAYR-FIENIP 419
Query: 394 RQRDLISWNGMIAAYAHHG 412
+ D I +++A HG
Sbjct: 420 IEPDHIMLGTLLSACKIHG 438
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 142/297 (47%), Gaps = 23/297 (7%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVN 116
+ G + +A+K+FD MP+RD MIN Y CG IKEA +LF +KD V WTA+++
Sbjct: 170 KSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQDV-KIKDTVCWTAMID 228
Query: 117 GYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFR---------RMPE 167
G V+ ++ +A LF EM NV + AL+L R RM
Sbjct: 229 GLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMEL 288
Query: 168 RNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAING----RVDDAREL 223
N V N +I S CG I +A+ F MR++DV S+ TM+ GLA++G +++ R++
Sbjct: 289 SNFVG-NALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDM 347
Query: 224 FDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP-----ERDMPSWNTLVTGFIQNGD 278
+R N V+ ++ + LD LE+F M E + + +V + G
Sbjct: 348 VNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGR 407
Query: 279 LNRAEKLFHEMP-QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFV 334
L A + +P + + I +++ HG E KI +L P++GT+V
Sbjct: 408 LEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESE--NPDSGTYV 462
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 308 bits (790), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 155/481 (32%), Positives = 268/481 (55%), Gaps = 43/481 (8%)
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPV 229
+V WN +++ ++CG + DA+ F++M RD+ SW MV+G A G +++AR+LFD M
Sbjct: 120 IVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 230 RNVVSWNVMIKGYAKNRRLDEALELF---ERMP--------------------------- 259
++ SW M+ GY K + +EAL L+ +R+P
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKE 239
Query: 260 ----------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGL 309
+ D W++L+ + + G ++ A +F ++ +K+V++WT+M+ Y +
Sbjct: 240 IHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSR 299
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS 369
E +F++L +PN TF VL AC+DL G+Q+H +++ F ++ S
Sbjct: 300 WREGFSLFSELVGS-CERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASS 358
Query: 370 ALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGF 429
+L++MY+KCG + A+ + D + DL+SW +I A +G EA+ F+ + + G
Sbjct: 359 SLVDMYTKCGNIESAKHVVDG--CPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 430 QANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAF 489
+ + VT+V +L+AC+HAGLVE+GL++F + + + DHY CLVDL R+GR ++
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 490 NIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVG 549
++I + + S +W +L GC+ +GN D+ + A+++ KIEPEN TY ++N+YA+ G
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 550 KWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
KW+E +R +M++ G+ K+PG SW E+ VF+ D SH + L +L KMK
Sbjct: 537 KWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Query: 610 K 610
+
Sbjct: 597 E 597
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 197/427 (46%), Gaps = 61/427 (14%)
Query: 78 LWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE 136
+W ++ Y CG + +ARK+FD P+ +D+ +W +VNGY ++ +EEA +LF EM E
Sbjct: 122 IWNRLLRMYAKCGSLVDARKVFDEMPN--RDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRM-------PERNVVSWNTIIKALSECGRIEDA 189
++ SW M+ GY + Q E+AL L+ M P VS A +C R
Sbjct: 180 KDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIR-RGK 238
Query: 190 QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNR 246
+ H + +R + D W++++D G +D+AR +FD++ ++VVSW MI Y K+
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 247 RLDEALELF-------ERMPERDMP--------------------------------SWN 267
R E LF ER E + +
Sbjct: 299 RWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASS 358
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
+LV + + G++ A+ + P+ ++++WT+++ G Q+G +EALK F+ L K
Sbjct: 359 SLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFD-LLLKSGTK 417
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQ-IHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
P+ TFV VL AC+ + +G + + + K ++ + L+++ ++ G +
Sbjct: 418 PDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKS 477
Query: 387 IFDEGLLRQRDLI--SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACS 444
+ E ++ + S G + Y + +EA K++ N VTYV + +
Sbjct: 478 VISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE----PENPVTYVTMANIYA 533
Query: 445 HAGLVEE 451
AG EE
Sbjct: 534 AAGKWEE 540
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 184/405 (45%), Gaps = 69/405 (17%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD----GPDA 104
N ++ + G +++ARKLFD M E+D + W M+ GY+ +EA L+ P++
Sbjct: 155 NVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNS 214
Query: 105 MKDVVT-----------------------------------WTALVNGYVKLNQIEEAER 129
++ T W++L++ Y K I+EA
Sbjct: 215 RPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM---PER-NVVSWNTIIKALSECGR 185
+F ++ E++V SW +MID Y ++ + + LF + ER N ++ ++ A ++
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 186 IEDAQWHFNQMRERDVKSW----TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKG 241
E + M + +++VD G ++ A+ + D P ++VSW +I G
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 242 YAKNRRLDEALELFERM----PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT- 296
A+N + DEAL+ F+ + + D ++ +++ G + + + F+ + +K+ ++
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454
Query: 297 ----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
+T ++ + G E+ + +++ +KP+ + +VLG CS ++ ++
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEM----PMKPSKFLWASVLGGCSTYGNIDLAEEA 510
Query: 353 HQLISKTAFQES-TYVVSALINMYSKCGELHIARRIFDEGLLRQR 396
Q + K + TYV A N+Y+ G+ +EG +R+R
Sbjct: 511 AQELFKIEPENPVTYVTMA--NIYAAAGKWE------EEGKMRKR 547
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 161/464 (34%), Positives = 266/464 (57%), Gaps = 54/464 (11%)
Query: 193 FNQMRER-------DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKN 245
F++M +R DVK+ T ++ +D R +F+ MP ++VVS+N +I GYA++
Sbjct: 166 FDEMPQRTSNSGDEDVKAETCIMPF-----GIDSVRRVFEVMPRKDVVSYNTIIAGYAQS 220
Query: 246 RRLDEALELFERMPERDM-----------PSWN--------------------------- 267
++AL + M D+ P ++
Sbjct: 221 GMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIG 280
Query: 268 -TLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
+LV + ++ + +E++F + ++ I+W +++ GYVQ+G EAL++F ++ +
Sbjct: 281 SSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQM-VTAKV 339
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
KP F +V+ AC+ LA L+ G+Q+H + + F + ++ SAL++MYSKCG + AR+
Sbjct: 340 KPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARK 399
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHA 446
IFD + D +SW +I +A HG+G EA++LF +M+ G + N V +V +LTACSH
Sbjct: 400 IFDR--MNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
Query: 447 GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGP 506
GLV+E YF+ + K + +HYA + DL GRAG+L+EA+N I + V+ + SVW
Sbjct: 458 GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWST 517
Query: 507 LLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
LL+ C+VH N ++ + VA+KI ++ EN G Y L+ NMYAS G+WKE A +R++M+ KGL
Sbjct: 518 LLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGL 577
Query: 567 KKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
+K+P CSW+E+ N FV GD+SH + + L + +M+K
Sbjct: 578 RKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEK 621
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 191/399 (47%), Gaps = 36/399 (9%)
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERD 200
S + +I Y +AL LF+ + V++W ++I+ ++ A F +MR
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 201 -----------VKSWTTMVD---GLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNR 246
+KS T M+D G +++G + R D ++ + N ++ YAK
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFI--VRLGMD----CDLYTGNALMNMYAKLL 154
Query: 247 RLDEALE---LFERMPERDMPSWNTLVTG--FIQNGDLNRAEKLFHEMPQKNVITWTAMM 301
+ + +F+ MP+R S + V I ++ ++F MP+K+V+++ ++
Sbjct: 155 GMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTII 214
Query: 302 TGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAF 361
GY Q G+ E+AL++ ++ LKP++ T +VL S+ + +G++IH + +
Sbjct: 215 AGYAQSGMYEDALRMVREMGTTD-LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGI 273
Query: 362 QESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLF 421
Y+ S+L++MY+K + + R+F L RD ISWN ++A Y +G EA+ LF
Sbjct: 274 DSDVYIGSSLVDMYAKSARIEDSERVFSR--LYCRDGISWNSLVAGYVQNGRYNEALRLF 331
Query: 422 NKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLK---NRSIQVREDHYACLVDL 478
+M + V + ++ AC+H + G Q +L+ +I + + LVD+
Sbjct: 332 RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIA----SALVDM 387
Query: 479 CGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNA 517
+ G +K A I + + V +S W ++ G +HG+
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVS-WTAIIMGHALHGHG 425
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 186/418 (44%), Gaps = 79/418 (18%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAM-------- 105
ID R++F+ MP +D+ + T+I GY G+ ++A ++ PD+
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 106 -----------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSW 142
DV ++LV+ Y K +IE++ER+F + R+ SW
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 143 NTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIE-DAQWHFNQMR 197
N+++ GY +NG+ +AL LFR+M V V+++++I A + + Q H +R
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 198 ---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALEL 254
++ + +VD + G + AR++FDRM V + VSW +I G+A + EA+ L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 255 FERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
FE M + + + N + + A++T GL +EA
Sbjct: 432 FEEMKRQGV---------------------------KPNQVAFVAVLTACSHVGLVDEAW 464
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAG-LNEGQQIHQLISKTAFQESTYVVSALIN 373
FN + + L + V +DL G + ++ + ISK + + V S L++
Sbjct: 465 GYFNSMTKVYGLNQELEHYAAV----ADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLS 520
Query: 374 MYSKCGELHIARRIFDEGL-LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
S L +A ++ ++ + ++ ++ M YA +G KE L +M++ G +
Sbjct: 521 SCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLR 578
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 165/511 (32%), Positives = 288/511 (56%), Gaps = 42/511 (8%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
D T ++ Y +I A +F EM R+V +WNTMI+ Y R G ++A LF M
Sbjct: 145 DPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMK 204
Query: 167 ERNVVSWNTII-KALSECGRIEDAQWH---FNQMRERDVKSWTTMVDGL----AINGRVD 218
+ NV+ I+ +S CGR + +++ + + E DV+ T ++ L A G +D
Sbjct: 205 DSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMD 264
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGD 278
ARE F +M VRN+ M+ GY+K RLD+A +F++ ++D+ W T+++ ++++
Sbjct: 265 MAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVES-- 322
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
+ PQ EAL++F ++ +KP+ + +V+
Sbjct: 323 ---------DYPQ--------------------EALRVFEEMCCS-GIKPDVVSMFSVIS 352
Query: 339 ACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDL 398
AC++L L++ + +H I + + +ALINMY+KCG L R +F++ + +R++
Sbjct: 353 ACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK--MPRRNV 410
Query: 399 ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDK 458
+SW+ MI A + HG +A++LF +M++ + N+VT+V +L CSH+GLVEEG + F
Sbjct: 411 VSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFAS 470
Query: 459 LLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD 518
+ +I + +HY C+VDL GRA L+EA +IE + V ++ +WG L++ C +HG +
Sbjct: 471 MTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELE 530
Query: 519 IGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVG 578
+GK AK+IL++EP++ G L+SN+YA +W++ N+R M++K + K+ G S ++
Sbjct: 531 LGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQN 590
Query: 579 NTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
F++GDK H QS + L ++ +K+K
Sbjct: 591 GKSHEFLIGDKRHKQSNEIYAKLDEVVSKLK 621
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/370 (26%), Positives = 182/370 (49%), Gaps = 18/370 (4%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDVVTWTALV 115
GRI+ AR +FD M RD+ W TMI Y G++ EA KLF+ + M D + +V
Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIV 219
Query: 116 NGYVKLNQIEEAERLFYEMPERNVRS----WNTMIDGYARNGQTEKALDLFRRMPERNVV 171
+ + + ++ + E +VR ++ YA G + A + FR+M RN+
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279
Query: 172 SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR- 230
++ S+CGR++DAQ F+Q ++D+ WTTM+ + +A +F+ M
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSG 339
Query: 231 ---NVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAE 283
+VVS +I A LD+A + + E ++ N L+ + + G L+
Sbjct: 340 IKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATR 399
Query: 284 KLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
+F +MP++NV++W++M+ HG + +AL +F +++ ++ ++PN TFV VL CS
Sbjct: 400 DVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQEN-VEPNEVTFVGVLYGCSHS 458
Query: 344 AGLNEGQQIH-QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWN 402
+ EG++I + + +++++ + L A + E + +++ W
Sbjct: 459 GLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVI-ESMPVASNVVIWG 517
Query: 403 GMIAAYAHHG 412
+++A HG
Sbjct: 518 SLMSACRIHG 527
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 172/394 (43%), Gaps = 86/394 (21%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER---------------------------------- 74
NT I R C+ G +D+A KLF+ M +
Sbjct: 181 NTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 75 -----DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAER 129
D HL ++ Y G + AR+ F +++++ TA+V+GY K ++++A+
Sbjct: 241 NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKM-SVRNLFVSTAMVSGYSKCGRLDDAQV 299
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSECGR 185
+F + ++++ W TMI Y + ++AL +F M + +VVS ++I A + G
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 186 IEDAQW-----HFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIK 240
++ A+W H N + E ++ +++ A G +D R++F++MP RNVVSW+ MI
Sbjct: 360 LDKAKWVHSCIHVNGL-ESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMIN 418
Query: 241 GYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAM 300
+ + +AL LF RM + ++ + N +T+ +
Sbjct: 419 ALSMHGEASDALSLFARMKQENV---------------------------EPNEVTFVGV 451
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAG-LNEGQQIHQLISKT 359
+ G GL EE KIF + ++ + P + G DL G N ++ ++I
Sbjct: 452 LYGCSHSGLVEEGKKIFASMTDEYNITPKLEHY----GCMVDLFGRANLLREALEVIESM 507
Query: 360 AFQESTYVVSALINMYSKCGELHI----ARRIFD 389
+ + +L++ GEL + A+RI +
Sbjct: 508 PVASNVVIWGSLMSACRIHGELELGKFAAKRILE 541
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 116/238 (48%), Gaps = 11/238 (4%)
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
+F+ +L A S ++ L EG ++H + K A +V + ++MY+ CG ++ AR +FDE
Sbjct: 113 SFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDE- 171
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEE 451
+ RD+++WN MI Y G EA LF +M++ +++ +++AC G +
Sbjct: 172 -MSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRY 230
Query: 452 GLQYFDKLLKNRSIQVREDHY--ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLA 509
++ L++N VR D + LV + AG + A + V +L V +++
Sbjct: 231 NRAIYEFLIEN---DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR-NLFVSTAMVS 286
Query: 510 GCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
G + G D +++ + E ++ ++ + + Y +EA V +M G+K
Sbjct: 287 GYSKCGRLDDAQVIFD---QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIK 341
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF- 99
L S + N I+ + G +D R +F++MP R++ W +MIN M G +A LF
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 100 --DGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER-----NVRSWNTMIDGYARN 152
+ + VT+ ++ G +EE +++F M + + + M+D + R
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 153 GQTEKALDLFRRMP-ERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK---SWTTMV 208
+AL++ MP NVV W +++ A G +E ++ ++ E + + M
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMS 554
Query: 209 DGLAINGRVDDARELFDRMPVRNV 232
+ A R +D R + M +NV
Sbjct: 555 NIYAREQRWEDVRNIRRVMEEKNV 578
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 186/637 (29%), Positives = 316/637 (49%), Gaps = 90/637 (14%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-------PD-------- 103
G + DAR++FD MPER+L + ++I GY G EA +L+ PD
Sbjct: 116 GSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSII 175
Query: 104 -----------------------AMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
+ ++ AL+ YV+ NQ+ +A R+FY +P +++
Sbjct: 176 KACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLI 235
Query: 141 SWNTMIDGYARNGQTEKALDLFRRM-------------------------PER------- 168
SW+++I G+++ G +AL + M P+
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 169 --------NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDA 220
N ++ ++ + CG + A+ F+Q+ D SW ++ GLA NG D+A
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEA 355
Query: 221 RELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPE----RDMPSWNTLVTG 272
+F +M + + +S ++ K L + +++ + + D+ N+L+T
Sbjct: 356 VSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTM 415
Query: 273 FIQNGDLNRAEKLFHEMPQK-NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
+ DL LF + + ++W ++T +QH E L++F KL +P+
Sbjct: 416 YTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF-KLMLVSECEPDHI 474
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
T +L C +++ L G Q+H KT ++ + LI+MY+KCG L ARRIFD
Sbjct: 475 TMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDS- 533
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEE 451
+ RD++SW+ +I YA G+G+EA+ LF +M+ G + N VT+V +LTACSH GLVEE
Sbjct: 534 -MDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEE 592
Query: 452 GLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGC 511
GL+ + + I ++H +C+VDL RAGRL EA I+ + ++ + VW LL+ C
Sbjct: 593 GLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSAC 652
Query: 512 NVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPG 571
GN + + A+ ILKI+P N+ + LL +M+AS G W+ AA +R MK +KK PG
Sbjct: 653 KTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPG 712
Query: 572 CSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKM 608
SW+E+ + + +F D H + + + +L ++ ++M
Sbjct: 713 QSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 104/199 (52%), Gaps = 4/199 (2%)
Query: 312 EALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
EAL+ F+ Q + + K T+++++ ACS L +G++IH I + + T + + +
Sbjct: 49 EALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHI 108
Query: 372 INMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
++MY KCG L AR +FD + +R+L+S+ +I Y+ +G G EAI L+ KM +
Sbjct: 109 LSMYGKCGSLRDAREVFD--FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVP 166
Query: 432 NDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNI 491
+ + ++ AC+ + V G Q +++K S A L+ + R ++ +A +
Sbjct: 167 DQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNA-LIAMYVRFNQMSDASRV 225
Query: 492 IEGLGVDLSLSVWGPLLAG 510
G+ + L W ++AG
Sbjct: 226 FYGIPMK-DLISWSSIIAG 243
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 158/468 (33%), Positives = 274/468 (58%), Gaps = 9/468 (1%)
Query: 148 GYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----S 203
YA +G+ +L LF + + ++ + I S G + A + Q+ ++ +
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 204 WTTMVDGLAI-NGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERD 262
+++++ + +G++ L + + V+ ++ YAK + A ++F+RMPER
Sbjct: 133 FSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATG-LVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 263 MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
+ S ++T + + G++ A LF M ++++++W M+ GY QHG +AL +F KL A
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+ KP+ T V L ACS + L G+ IH + + + + V + LI+MYSKCG L
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
Query: 383 IARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL-GFQANDVTYVELLT 441
A +F++ ++D+++WN MIA YA HGY ++A+ LFN+MQ + G Q D+T++ L
Sbjct: 312 EAVLVFND--TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQ 369
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSL 501
AC+HAGLV EG++ F+ + + I+ + +HY CLV L GRAG+LK A+ I+ + +D
Sbjct: 370 ACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADS 429
Query: 502 SVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKM 561
+W +L C +HG+ +GK +A+ ++ + +N+G Y LLSN+YASVG ++ A VR M
Sbjct: 430 VLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLM 489
Query: 562 KDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
K+KG+ K+PG S +E+ N V F GD+ HS+S+ + +L + ++K
Sbjct: 490 KEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIK 537
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 146/285 (51%), Gaps = 14/285 (4%)
Query: 145 MIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSW 204
++D YA+ G A +F RMPER++VS +I ++ G +E A+ F+ M ERD+ SW
Sbjct: 167 LVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSW 226
Query: 205 TTMVDGLAINGRVDDARELFDRM-----PVRNVVSWNVMIKGYAKNRRLDEA--LELFER 257
M+DG A +G +DA LF ++ P + ++ + ++ L+ + +F +
Sbjct: 227 NVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVK 286
Query: 258 MP--ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
++ L+ + + G L A +F++ P+K+++ W AM+ GY HG S++AL+
Sbjct: 287 SSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALR 346
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT-AFQESTYVVSALINM 374
+FN++Q L+P TF+ L AC+ +NEG +I + + + + L+++
Sbjct: 347 LFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSL 406
Query: 375 YSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG---YGKE 416
+ G+L A + + D + W+ ++ + HG GKE
Sbjct: 407 LGRAGQLKRAYETI-KNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 70/297 (23%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGY 118
G + A+K+FDRMPER L V+ TA++ Y
Sbjct: 175 GDVVSAQKVFDRMPERSL--------------------------------VSSTAMITCY 202
Query: 119 VKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM-----PERNVVSW 173
K +E A LF M ER++ SWN MIDGYA++G AL LF+++ P+ + ++
Sbjct: 203 AKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 262
Query: 174 NTIIKALSECGRIEDAQW-HFNQMRER---DVKSWTTMVDGLAINGRVDDARELFDRMPV 229
+ A S+ G +E +W H R +VK T ++D + G +++A +F+ P
Sbjct: 263 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 230 RNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEM 289
+++V+WN MI GYA + +AL LF M +TG
Sbjct: 323 KDIVAWNAMIAGYAMHGYSQDALRLFNEMQG---------ITGL---------------- 357
Query: 290 PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNT---GTFVTVLGACSDL 343
Q IT+ + GL E ++IF + ++ +KP G V++LG L
Sbjct: 358 -QPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQL 413
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 113/248 (45%), Gaps = 21/248 (8%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA----RKLFDGPDAMKD 107
I+ ++G ++ AR LFD M ERD+ W MI+GY G +A +KL D
Sbjct: 199 ITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPD 258
Query: 108 VVTWTALVNGYVKLNQIEEAE--RLFYEMP--ERNVRSWNTMIDGYARNGQTEKALDLFR 163
+T A ++ ++ +E +F + NV+ +ID Y++ G E+A+ +F
Sbjct: 259 EITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFN 318
Query: 164 RMPERNVVSWNTIIKALSECGRIEDAQWHFNQM------RERDVKSWTTMVDGLAINGRV 217
P +++V+WN +I + G +DA FN+M + D+ ++ + A G V
Sbjct: 319 DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDI-TFIGTLQACAHAGLV 377
Query: 218 DDARELFDRMPVR-----NVVSWNVMIKGYAKNRRLDEALELFERMP-ERDMPSWNTLVT 271
++ +F+ M + + ++ + +L A E + M + D W++++
Sbjct: 378 NEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLG 437
Query: 272 GFIQNGDL 279
+GD
Sbjct: 438 SCKLHGDF 445
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 299/536 (55%), Gaps = 54/536 (10%)
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER 168
++ + LV+ +K I+ A ++F M ER++ +WN++I ++ ++++A++++R M
Sbjct: 100 ISGSKLVDASLKCGDIDYARQVFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITN 159
Query: 169 NVV----SWNTIIKALSECGRIEDAQWHFN-----QMRERDVKSWTTMVDGLAINGRVDD 219
NV+ + +++ KA S+ ++AQ + +V + +VD G+ +
Sbjct: 160 NVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE 219
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM------P-------------- 259
A+ + DR+ ++VV +I GY++ EA++ F+ M P
Sbjct: 220 AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGN 279
Query: 260 -------------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAM 300
E + S +L+T +++ ++ + ++F + N ++WT++
Sbjct: 280 LKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSL 339
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
++G VQ+G E AL F K+ D ++KPN+ T + L CS+LA EG+QIH +++K
Sbjct: 340 ISGLVQNGREEMALIEFRKMMRD-SIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG 398
Query: 361 FQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINL 420
F Y S LI++Y KCG +AR +FD L + D+IS N MI +YA +G+G+EA++L
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDT--LSEVDVISLNTMIYSYAQNGFGREALDL 456
Query: 421 FNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCG 480
F +M LG Q NDVT + +L AC+++ LVEEG + FD K++ I + DHYAC+VDL G
Sbjct: 457 FERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDK-IMLTNDHYACMVDLLG 515
Query: 481 RAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSL 540
RAGRL+EA ++ ++ L +W LL+ C VH ++ + + +KIL+IEP + GT L
Sbjct: 516 RAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLIL 574
Query: 541 LSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDK-SHSQSE 595
+SN+YAS GKW ++ KMKD LKK P SWVE+ F+ GD SH SE
Sbjct: 575 MSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSE 630
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 50/280 (17%)
Query: 39 SSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL 98
S SA+ + ++ + +DD+ ++F + + W ++I+G + G +E L
Sbjct: 296 SGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNG--REEMAL 353
Query: 99 FDGPDAMKDVV-----TWTALVNGYVKLNQIEE--------------------------- 126
+ M+D + T ++ + G L EE
Sbjct: 354 IEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLY 413
Query: 127 --------AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWN 174
A +F + E +V S NTMI YA+NG +ALDLF RM + N V+
Sbjct: 414 GKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVL 473
Query: 175 TIIKALSECGRIEDAQWHFNQMRERDV----KSWTTMVDGLAINGRVDDARELFDRMPVR 230
+++ A + +E+ F+ R+ + + MVD L GR+++A L +
Sbjct: 474 SVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINP 533
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLV 270
++V W ++ +R+++ A + ++ E + TL+
Sbjct: 534 DLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLI 573
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 197/651 (30%), Positives = 318/651 (48%), Gaps = 90/651 (13%)
Query: 20 HPTFIINGYPFLRTMSTSTSSLHSAM-KDC---NTSISRLCQEGRIDDAR---KLFDRMP 72
H ++N Y ++ + S ++ + KD N+ I+ Q G I + +LF M
Sbjct: 51 HANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMR 110
Query: 73 ERDLHLWGTMINGYIMCGVIK------------EARKLFDGPDAMKDVVTWTALVNGYVK 120
+D+ + N Y + G+ K +A L + D+ T+LV Y K
Sbjct: 111 AQDI-----LPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCK 165
Query: 121 LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKAL---DLFRRMPERNVVS---WN 174
+E+ ++F MPERN +W+TM+ GYA G+ E+A+ +LF R E S +
Sbjct: 166 AGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFT 225
Query: 175 TIIKALS-----------ECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDAREL 223
++ +L+ C I++ F + V ++ +++A ++
Sbjct: 226 AVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCES-------LNEACKM 278
Query: 224 FDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM------P------------------ 259
FD RN ++W+ M+ GY++N EA++LF RM P
Sbjct: 279 FDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYL 338
Query: 260 ---------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGY 304
ER + + LV + + G L A K F + +++V WT++++GY
Sbjct: 339 EEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGY 398
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQES 364
VQ+ +EEAL ++ +++ + PN T +VL ACS LA L G+Q+H K F
Sbjct: 399 VQNSDNEEALILYRRMKTA-GIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLE 457
Query: 365 TYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM 424
+ SAL MYSKCG L +F +D++SWN MI+ +H+G G EA+ LF +M
Sbjct: 458 VPIGSALSTMYSKCGSLEDGNLVFRR--TPNKDVVSWNAMISGLSHNGQGDEALELFEEM 515
Query: 425 QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGR 484
G + +DVT+V +++ACSH G VE G YF+ + + + DHYAC+VDL RAG+
Sbjct: 516 LAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 575
Query: 485 LKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNM 544
LKEA IE +D L +W LL+ C HG ++G +K++ + + TY LS +
Sbjct: 576 LKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGI 635
Query: 545 YASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
Y ++G+ ++ V M+ G+ K+ GCSW+E+ N VFVVGD H E
Sbjct: 636 YTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIE 686
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 192/400 (48%), Gaps = 38/400 (9%)
Query: 128 ERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIE 187
++L + +RN ++ G A +GQ + R + N ++ ++CG++
Sbjct: 19 KKLTHHSQQRN------LVAGRAVHGQ------IIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 188 DAQWHFNQMRERDVKSWTTMVDGLAINGRVDDAR---ELFDRMPVRNVVSWNVMIKGYAK 244
A FN + +DV SW +++ G + NG + + +LF M ++++ + G K
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 245 NRRL-------DEALELFERMPE-RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
+A L +M D+ +LV + + G + K+F MP++N T
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 297 WTAMMTGYVQHGLSEEALKIFNK-LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
W+ M++GY G EEA+K+FN L+ + F VL + + + G+QIH +
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCI 246
Query: 356 ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK 415
K + +AL+ MYSKC L+ A ++FD R+ I+W+ M+ Y+ +G
Sbjct: 247 TIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSS--GDRNSITWSAMVTGYSQNGESL 304
Query: 416 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA-- 473
EA+ LF++M G + ++ T V +L ACS +EEG Q LLK + +A
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLK---LGFERHLFATT 361
Query: 474 CLVDLCGRAGRLKEA---FNIIEGLGVDLSLSVWGPLLAG 510
LVD+ +AG L +A F+ ++ + +++W L++G
Sbjct: 362 ALVDMYAKAGCLADARKGFDCLQ----ERDVALWTSLISG 397
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 19/238 (7%)
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
L P+T T + L S L G+ +H I +T + L+N Y+KCG+L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHG---YGKEAINLFNKMQELGFQANDVTYVELLTA 442
IF+ + +D++SWN +I Y+ +G + LF +M+ N T + A
Sbjct: 70 SIFNAIIC--KDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 443 CSHAGLVEEGLQYFDKLLKNRSIQVREDHY--ACLVDLCGRAGRLKEAFNIIEGLGVDLS 500
S G Q ++K S D Y LV + +AG +++ + + + +
Sbjct: 128 ESSLQSSTVGRQAHALVVKMSSFG---DIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERN 183
Query: 501 LSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGT--------YSLLSNMYASVGK 550
W +++G G + V L+ + E + + SL + +Y +G+
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/497 (32%), Positives = 289/497 (58%), Gaps = 31/497 (6%)
Query: 124 IEEAERLFYEMPERNVRSWNTMIDGYARNGQTEK--ALDLFRRM-----PERNVVSWNTI 176
++ A ++F +MP+RN SWNT+I G++ + + + A+ LF M E N ++ ++
Sbjct: 75 LDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSV 134
Query: 177 IKALSECGRIEDA-QWHFNQMRER---DVKSWTTMVDGLAINGRVDDARELFDRMPVRNV 232
+KA ++ G+I++ Q H ++ D + +V + G + DAR LF +N+
Sbjct: 135 LKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF----YKNI 190
Query: 233 VSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK 292
+ ++++ R+ D + L WN ++ G+++ GD A LF +M Q+
Sbjct: 191 IEKDMVV--MTDRRKRDGEIVL-----------WNVMIDGYMRLGDCKAARMLFDKMRQR 237
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
+V++W M++GY +G ++A+++F +++ ++PN T V+VL A S L L G+ +
Sbjct: 238 SVVSWNTMISGYSLNGFFKDAVEVFREMKKGD-IRPNYVTLVSVLPAISRLGSLELGEWL 296
Query: 353 HQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
H + + + SALI+MYSKCG + A +F+ L + ++I+W+ MI +A HG
Sbjct: 297 HLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFER--LPRENVITWSAMINGFAIHG 354
Query: 413 YGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
+AI+ F KM++ G + +DV Y+ LLTACSH GLVEEG +YF +++ ++ R +HY
Sbjct: 355 QAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHY 414
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP 532
C+VDL GR+G L EA I + + +W LL C + GN ++GK VA ++ + P
Sbjct: 415 GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVP 474
Query: 533 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHS 592
++G Y LSNMYAS G W E + +R++MK+K ++K PGCS +++ + FVV D SH
Sbjct: 475 HDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHP 534
Query: 593 QSELLGYLLLDLHTKMK 609
+++ + +L+++ K++
Sbjct: 535 KAKEINSMLVEISDKLR 551
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 155/319 (48%), Gaps = 49/319 (15%)
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE--ALKIFNKLQADHALKP 328
T + + DL+ A K+F++MPQ+N +W ++ G+ + + A+ +F ++ +D ++P
Sbjct: 67 TSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEP 126
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
N TF +VL AC+ + EG+QIH L K F +V+S L+ MY CG + AR +F
Sbjct: 127 NRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLF 186
Query: 389 DEGL-------------------------------------------LRQRDLISWNGMI 405
+ + +RQR ++SWN MI
Sbjct: 187 YKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMI 246
Query: 406 AAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSI 465
+ Y+ +G+ K+A+ +F +M++ + N VT V +L A S G +E G ++ ++ I
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGI 305
Query: 466 QVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD--IGKLV 523
++ + + L+D+ + G +++A ++ E L + ++ W ++ G +HG A I
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 524 AKKILKIEPENAGTYSLLS 542
+ + P + +LL+
Sbjct: 365 KMRQAGVRPSDVAYINLLT 383
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 168/336 (50%), Gaps = 37/336 (11%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKD-------------VVTWTALVNGYVKL 121
D + ++ Y+MCG +K+AR LF KD +V W +++GY++L
Sbjct: 162 DEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRL 221
Query: 122 NQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE----RNVVSWNTII 177
+ A LF +M +R+V SWNTMI GY+ NG + A+++FR M + N V+ +++
Sbjct: 222 GDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVL 281
Query: 178 KALSECGRIEDAQW-HF----NQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV 232
A+S G +E +W H + +R DV + ++D + G ++ A +F+R+P NV
Sbjct: 282 PAISRLGSLELGEWLHLYAEDSGIRIDDVLG-SALIDMYSKCGIIEKAIHVFERLPRENV 340
Query: 233 VSWNVMIKGYAKNRRLDEALELFERMPERDM-PS---WNTLVTGFIQNGDLNRAEKLFHE 288
++W+ MI G+A + + +A++ F +M + + PS + L+T G + + F +
Sbjct: 341 ITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQ 400
Query: 289 MP-----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
M + + + M+ + GL +EA + + +KP+ + +LGAC
Sbjct: 401 MVSVDGLEPRIEHYGCMVDLLGRSGLLDEA----EEFILNMPIKPDDVIWKALLGACRMQ 456
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
+ G+++ ++ +S V AL NMY+ G
Sbjct: 457 GNVEMGKRVANILMDMVPHDSGAYV-ALSNMYASQG 491
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 127/280 (45%), Gaps = 20/280 (7%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF---DGPDAM 105
N I + G AR LFD+M +R + W TMI+GY + G K+A ++F D
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS----WNTMIDGYARNGQTEKALDL 161
+ VT +++ +L +E E L + +R + +ID Y++ G EKA+ +
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 162 FRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRV 217
F R+P NV++W+ +I + G+ DA F +MR+ V+ ++ ++ + G V
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLV 391
Query: 218 DDARELFDRMPVRN-----VVSWNVMIKGYAKNRRLDEALELFERMPER-DMPSWNTLVT 271
++ R F +M + + + M+ ++ LDEA E MP + D W L+
Sbjct: 392 EEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
Query: 272 GFIQNGDL---NRAEKLFHEMPQKNVITWTAMMTGYVQHG 308
G++ R + +M + + A+ Y G
Sbjct: 452 ACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQG 491
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 300 bits (769), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 189/594 (31%), Positives = 311/594 (52%), Gaps = 31/594 (5%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL-- 98
+ S ++ N+ ++ + G +D A K F RM ERD+ W +++ Y G +EA +L
Sbjct: 212 MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 99 -FDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE----RNVRSWNTMIDGYARNG 153
+ +VTW L+ GY +L + + A L +M +V +W MI G NG
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNG 331
Query: 154 QTEKALDLFRRMPERNVV-SWNTIIKALSECGRI----EDAQWHFNQMRE---RDVKSWT 205
+ALD+FR+M VV + TI+ A+S C + + ++ H ++ DV
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 206 TMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMP- 264
++VD + G+++DAR++FD + ++V +WN MI GY + +A ELF RM + ++
Sbjct: 392 SLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 265 ---SWNTLVTGFIQNGDLNRAEKLFHEMP-----QKNVITWTAMMTGYVQHGLSEEALKI 316
+WNT+++G+I+NGD A LF M Q+N TW ++ GY+Q+G +EAL++
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 317 FNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
F K+Q + PN+ T +++L AC++L G ++IH + + V +AL + Y+
Sbjct: 512 FRKMQFSRFM-PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYA 570
Query: 377 KCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
K G++ +R IF + +D+I+WN +I Y HG A+ LFN+M+ G N T
Sbjct: 571 KSGDIEYSRTIFLG--METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTL 628
Query: 437 VELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLG 496
++ A G V+EG + F + + I +H + +V L GRA RL+EA I+ +
Sbjct: 629 SSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMN 688
Query: 497 VDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAAN 556
+ +W L GC +HG+ D+ A+ + +EPEN T S++S +YA K +
Sbjct: 689 IQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLE 748
Query: 557 VRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
+D LKK G SW+EV N + F GD QS+L +L L KM +
Sbjct: 749 GNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGD----QSKLCTDVLYPLVEKMSR 798
Score = 202 bits (513), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 228/438 (52%), Gaps = 33/438 (7%)
Query: 55 LCQEGRIDDARKLFDRMPERD--------LHLWGTMIN-GYIMCGVIKEAR-KLFDGPDA 104
LC+ G + +A K D + ++ L L + I+ G I G I AR LF PD
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFGLFTEPD- 114
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
V T L++ Y K I +A ++F M ERN+ +W+ MI Y+R + + LFR
Sbjct: 115 ---VFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 165 MPERNVVS----WNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGL----AINGR 216
M + V+ + I++ + CG +E + + + + + S + + + A G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMP----SWNTLVTG 272
+D A + F RM R+V++WN ++ Y +N + +EA+EL + M + + +WN L+ G
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 273 FIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
+ Q G + A L +M +V TWTAM++G + +G+ +AL +F K+ + P
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL-AGVVP 350
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
N T ++ + ACS L +N+G ++H + K F + V ++L++MYSKCG+L AR++F
Sbjct: 351 NAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVF 410
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGL 448
D ++ +D+ +WN MI Y GY +A LF +MQ+ + N +T+ +++ G
Sbjct: 411 DS--VKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGD 468
Query: 449 VEEGLQYFDKLLKNRSIQ 466
E + F ++ K+ +Q
Sbjct: 469 EGEAMDLFQRMEKDGKVQ 486
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 127/264 (48%), Gaps = 30/264 (11%)
Query: 320 LQADHAL--------KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQE-STYVVSA 370
L+A+ AL K T++ +L +C D ++ G+ +H F E +V +
Sbjct: 63 LEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARFG--LFTEPDVFVETK 120
Query: 371 LINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
L++MY+KCG + AR++FD +R+R+L +W+ MI AY+ +E LF M + G
Sbjct: 121 LLSMYAKCGCIADARKVFDS--MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVL 178
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACL------VDLCGRAGR 484
+D + ++L C++ G VE G K++ S+ ++ +CL + + + G
Sbjct: 179 PDDFLFPKILQGCANCGDVEAG-----KVI--HSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 485 LKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAG--TYSLLS 542
L A + ++ LLA C + + +LV K ++ E + G T+++L
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELV--KEMEKEGISPGLVTWNILI 289
Query: 543 NMYASVGKWKEAANVRMKMKDKGL 566
Y +GK A ++ KM+ G+
Sbjct: 290 GGYNQLGKCDAAMDLMQKMETFGI 313
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/603 (29%), Positives = 303/603 (50%), Gaps = 88/603 (14%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------------GPDAM 105
G DAR +FD++PE D +LW M+ Y + E KL+D A+
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKAL 149
Query: 106 K------------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS 141
K D V T L++ Y K +I+ A ++F ++ RNV
Sbjct: 150 KACTELQDLDNGKKIHCQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVC 209
Query: 142 WNTMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMR 197
W +MI GY +N E+ L LF RM E NV+ ++ T+I A ++ + +W +
Sbjct: 210 WTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLV 269
Query: 198 ERDVKS----WTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALE 253
+ ++ T+++D G + +AR +F+ ++V W MI GY N ++EAL
Sbjct: 270 KSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 329
Query: 254 LFERMPERDM-PSWNTLVT-----GFIQNGDLNR-------------------------- 281
LF++M ++ P+ T+ + G I+N +L R
Sbjct: 330 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNVANALVHMYAK 389
Query: 282 ------AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVT 335
A+ +F +K+++ W ++++G+ Q+G EAL +F+++ ++ ++ PN T +
Sbjct: 390 CYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE-SVTPNGVTVAS 448
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAF--QESTYVVSALINMYSKCGELHIARRIFDEGLL 393
+ AC+ L L G +H K F S +V +AL++ Y+KCG+ AR IFD +
Sbjct: 449 LFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT--I 506
Query: 394 RQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGL 453
+++ I+W+ MI Y G ++ LF +M + + N+ T+ +L+AC H G+V EG
Sbjct: 507 EEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGK 566
Query: 454 QYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNV 513
+YF + K+ + HY C+VD+ RAG L++A +IIE + + + +G L GC +
Sbjct: 567 KYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGM 626
Query: 514 HGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 573
H D+G++V KK+L + P++A Y L+SN+YAS G+W +A VR MK +GL K G S
Sbjct: 627 HSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Query: 574 WVE 576
+E
Sbjct: 687 TME 689
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/509 (25%), Positives = 237/509 (46%), Gaps = 72/509 (14%)
Query: 92 IKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYAR 151
++++ + G M D+ T LV+ Y ++A +F ++PE + W M+ Y
Sbjct: 60 LRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCL 119
Query: 152 NGQTEKALDLFRRMPERNVVSWNTII--KALSECGRIED------AQWHFNQMRERDVKS 203
N ++ + + L+ + + ++ I+ KAL C ++D ++ D
Sbjct: 120 NKESVEVVKLYDLLMKHG-FRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVV 178
Query: 204 WTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM 263
T ++D A G + A ++F+ + +RNVV W MI GY KN +E L LF RM E ++
Sbjct: 179 LTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNV 238
Query: 264 ----PSWNTLVTG-----------------------------------FIQNGDLNRAEK 284
++ TL+ +++ GD++ A +
Sbjct: 239 LGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARR 298
Query: 285 LFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLA 344
+F+E +++ WTAM+ GY +G EAL +F K++ +KPN T +VL C +
Sbjct: 299 VFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE-IKPNCVTIASVLSGCGLIE 357
Query: 345 GLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGM 404
L G+ +H L K + T V +AL++MY+KC + A+ +F+ + ++D+++WN +
Sbjct: 358 NLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVFE--MESEKDIVAWNSI 414
Query: 405 IAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ---YFDKL-- 459
I+ ++ +G EA+ LF++M N VT L +AC+ G + G Y KL
Sbjct: 415 ISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGF 474
Query: 460 LKNRSIQVRE---DHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN 516
L + S+ V D YA CG + F+ IE + + W ++ G G+
Sbjct: 475 LASSSVHVGTALLDFYA----KCGDPQSARLIFDTIE----EKNTITWSAMIGGYGKQGD 526
Query: 517 ADIGKL-VAKKILKIE--PENAGTYSLLS 542
IG L + +++LK + P + S+LS
Sbjct: 527 T-IGSLELFEEMLKKQQKPNESTFTSILS 554
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/175 (20%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ 395
+L C+++ L +Q H +++ + + L+++Y G AR +FD+ + +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQ--IPE 104
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQY 455
D W M+ Y + E + L++ + + GF+ +D+ + + L AC+ ++ G +
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 456 FDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
+L+K S L+D+ + G +K A + + + ++ W ++AG
Sbjct: 165 HCQLVKVPSFD--NVVLTGLLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAG 216
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/477 (32%), Positives = 280/477 (58%), Gaps = 18/477 (3%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRI 186
A+R FY + + +I G + +++ FR ++V NT++ ++CG +
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSI--FRH----DIVMGNTLLNMYAKCGSL 111
Query: 187 EDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM----PVRNVVSWNVMIKGY 242
E+A+ F +M +RD +WTT++ G + + R DA F++M N + + +IK
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAA 171
Query: 243 AKNRR--LDEALELF--ERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWT 298
A RR L F + + ++ + L+ + + G ++ A+ +F + +N ++W
Sbjct: 172 AAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWN 231
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
A++ G+ + +E+AL++F + D +P+ ++ ++ GACS L +G+ +H + K
Sbjct: 232 ALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAI 418
+ + + + L++MY+K G +H AR+IFD L +RD++SWN ++ AYA HG+GKEA+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR--LAKRDVVSWNSLLTAYAQHGFGKEAV 348
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL 478
F +M+ +G + N+++++ +LTACSH+GL++EG Y++ L+K I HY +VDL
Sbjct: 349 WWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYE-LMKKDGIVPEAWHYVTVVDL 407
Query: 479 CGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTY 538
GRAG L A IE + ++ + ++W LL C +H N ++G A+ + +++P++ G +
Sbjct: 408 LGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPH 467
Query: 539 SLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
+L N+YAS G+W +AA VR KMK+ G+KK+P CSWVE+ N + +FV D+ H Q E
Sbjct: 468 VILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQRE 524
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 176/357 (49%), Gaps = 59/357 (16%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM- 165
D+V L+N Y K +EEA ++F +MP+R+ +W T+I GY+++ + AL F +M
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQML 153
Query: 166 ---PERNVVSWNTIIKALSE-----CGRIEDAQWHFNQMR---ERDVKSWTTMVDGLAIN 214
N + +++IKA + CG Q H ++ + +V + ++D
Sbjct: 154 RFGYSPNEFTLSSVIKAAAAERRGCCGH----QLHGFCVKCGFDSNVHVGSALLDLYTRY 209
Query: 215 GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERD--MPS------- 265
G +DDA+ +FD + RN VSWN +I G+A+ ++ALELF+ M RD PS
Sbjct: 210 GLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGML-RDGFRPSHFSYASL 268
Query: 266 --------------W-----------------NTLVTGFIQNGDLNRAEKLFHEMPQKNV 294
W NTL+ + ++G ++ A K+F + +++V
Sbjct: 269 FGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDV 328
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
++W +++T Y QHG +EA+ F +++ ++PN +F++VL ACS L+EG ++
Sbjct: 329 VSWNSLLTAYAQHGFGKEAVWWFEEMRRV-GIRPNEISFLSVLTACSHSGLLDEGWHYYE 387
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHH 411
L+ K + ++++ + G+L+ A R +E + I W ++ A H
Sbjct: 388 LMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAI-WKALLNACRMH 443
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 42/240 (17%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
NT + + G I DARK+FDR+ +RD+ W +++ Y G KEA F + M+ V
Sbjct: 301 NTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF---EEMRRV 357
Query: 109 ------VTWTALVNGYVKLNQIEEAERLFYEMPERN---VRSWN--TMIDGYARNGQTEK 157
+++ +++ ++E +YE+ +++ +W+ T++D R G +
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWH-YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 158 ALDLFRRMP-ERNVVSWNTIIKAL-----SECGRIEDAQWHFNQMRERDVKSWTTMVDGL 211
AL MP E W ++ A +E G A H ++ D + +
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY--AAEHVFELDPDDPGPHVILYNIY 474
Query: 212 AINGRVDDARELFDRMPVRNV-----VSWNVMIKGYAKNRRLDEALELF----ERMPERD 262
A GR +DA + +M V SW ++ A+ +F ER P+R+
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSW----------VEIENAIHMFVANDERHPQRE 524
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 299 bits (765), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 192/642 (29%), Positives = 319/642 (49%), Gaps = 99/642 (15%)
Query: 56 CQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-DGPDA---------- 104
C+ + AR+LFDRMPER++ + ++I+GY G ++A +LF + +A
Sbjct: 93 CKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYA 152
Query: 105 ---------------------------MKDVVTWTALVNGYVKLNQIEEAERLFYEMPER 137
+ V L++ Y K ++++A LF ER
Sbjct: 153 GALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER 212
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRMPER--NVVSW--NTIIKA----LSECGRIEDA 189
+ SWN++I GY R G E+ L+L +M N+ ++ +++KA L+E G IE
Sbjct: 213 DQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNE-GFIEKG 271
Query: 190 Q----WHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKN 245
+ E D+ T ++D A NG + +A +LF MP +NVV++N MI G+ +
Sbjct: 272 MAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQM 331
Query: 246 RRL-----DEALELFERMPERDM-PSWNT------------------------------- 268
+ EA +LF M R + PS +T
Sbjct: 332 DEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQS 391
Query: 269 -------LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
L+ + G + F ++++ +WT+M+ +VQ+ E A +F +L
Sbjct: 392 DEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLF 451
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
+ H ++P T ++ AC+D A L+ G+QI K+ T V ++ I+MY+K G +
Sbjct: 452 SSH-IRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNM 510
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
+A ++F E ++ D+ +++ MI++ A HG EA+N+F M+ G + N ++ +L
Sbjct: 511 PLANQVFIE--VQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLI 568
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSL 501
AC H GLV +GL+YF + + I E H+ CLVDL GR GRL +A N+I G
Sbjct: 569 ACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHP 628
Query: 502 SVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKM 561
W LL+ C V+ ++ IGK VA++++++EPE +G+Y LL N+Y G A VR M
Sbjct: 629 VTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELM 688
Query: 562 KDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLD 603
+D+G+KK+P SW+ +GN F V D SH S+++ Y +L+
Sbjct: 689 RDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMI-YTMLE 729
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 135/506 (26%), Positives = 212/506 (41%), Gaps = 96/506 (18%)
Query: 118 YVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTI 176
Y K ++ A +LF MPERN+ S+N++I GY + G E+A++LF E N+ + T
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 177 IKALSECGRIEDAQWH--------FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMP 228
AL CG D N + ++ V ++D + G++D A LFDR
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQ-VFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 229 VRNVVSWNVMIKGYAKNRRLDEALELFERMP----------------------------- 259
R+ VSWN +I GY + +E L L +M
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 260 -------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQ 306
E D+ L+ + +NG L A KLF MP KNV+T+ AM++G++Q
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 307 HG-----LSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAF 361
S EA K+F +Q L+P+ TF VL ACS L G+QIH LI K F
Sbjct: 331 MDEITDEASSEAFKLFMDMQ-RRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 362 QESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLF 421
Q ++ SALI +Y+ G + F ++D+ SW MI + + + A +LF
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFAS--TSKQDIASWTSMIDCHVQNEQLESAFDLF 447
Query: 422 NKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGR 481
++ + + T +++AC+ + G Q +K+
Sbjct: 448 RQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKS------------------- 488
Query: 482 AGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLL 541
G+D SV ++ GN + V ++++ + TYS +
Sbjct: 489 --------------GIDAFTSVKTSSISMYAKSGNMPLANQV---FIEVQNPDVATYSAM 531
Query: 542 SNMYASVGKWKEAANVRMKMKDKGLK 567
+ A G EA N+ MK G+K
Sbjct: 532 ISSLAQHGSANEALNIFESMKTHGIK 557
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 195/454 (42%), Gaps = 98/454 (21%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DGPD 103
N I + G++D A LFDR ERD W ++I+GY+ G +E L DG +
Sbjct: 187 NVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLN 246
Query: 104 AMK------------------------------------DVVTWTALVNGYVKLNQIEEA 127
D+V TAL++ Y K ++EA
Sbjct: 247 LTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEA 306
Query: 128 ERLFYEMPERNVRSWNTMIDGYARNGQ-TEKA--------LDLFRRMPERNVVSWNTIIK 178
+LF MP +NV ++N MI G+ + + T++A +D+ RR E + +++ ++K
Sbjct: 307 IKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLK 366
Query: 179 ALSECGRIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVRNVVS 234
A S +E + + + + +S + +++ A+ G +D + F +++ S
Sbjct: 367 ACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIAS 426
Query: 235 WNVMIKGYAKNRRLDEALELFERM------PERDMPS--------WNTLVTG-------- 272
W MI + +N +L+ A +LF ++ PE S + L +G
Sbjct: 427 WTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAI 486
Query: 273 -----------------FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
+ ++G++ A ++F E+ +V T++AM++ QHG + EAL
Sbjct: 487 KSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALN 546
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI-SKTAFQESTYVVSALINM 374
IF ++ H +KPN F+ VL AC + +G + Q + + + + L+++
Sbjct: 547 IFESMKT-HGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDL 605
Query: 375 YSKCGELHIARR-IFDEGLLRQRDLISWNGMIAA 407
+ G L A I G Q ++W ++++
Sbjct: 606 LGRTGRLSDAENLILSSGF--QDHPVTWRALLSS 637
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 99/230 (43%), Gaps = 39/230 (16%)
Query: 374 MYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
MY KC EL AR++FD + +R++IS+N +I+ Y G+ ++A+ LF + +E + +
Sbjct: 91 MYCKCRELGFARQLFDR--MPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDK 148
Query: 434 VTYVELLTACS-----------HAGLVEEGL--QYF--DKLLKNRSIQVREDHYACLVDL 478
TY L C H +V GL Q F + L+ S + D L D
Sbjct: 149 FTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR 208
Query: 479 CG---------------RAGRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVH---GNA 517
C R G +E N++ + G++L+ G +L C ++ G
Sbjct: 209 CDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFI 268
Query: 518 DIGKLVAKKILKIEPE-NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
+ G + K+ E + + L +MYA G KEA + M K +
Sbjct: 269 EKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNV 318
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 158/455 (34%), Positives = 265/455 (58%), Gaps = 12/455 (2%)
Query: 145 MIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----- 199
M+D + + A LF ++ NV +N+II+A + D + Q+ +
Sbjct: 48 MVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELP 107
Query: 200 DVKSWTTMVDGLAINGRVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELF 255
D ++ M A G +++ + P +VV+ N +I Y K L +A ++F
Sbjct: 108 DRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVF 167
Query: 256 ERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
+ M ERD+ SWN+L++G+ + G + +A+ LFH M K +++WTAM++GY G EA+
Sbjct: 168 DEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMD 227
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
F ++Q ++P+ + ++VL +C+ L L G+ IH + F + T V +ALI MY
Sbjct: 228 FFREMQLA-GIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMY 286
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
SKCG + A ++F G + +D+ISW+ MI+ YA+HG AI FN+MQ + N +T
Sbjct: 287 SKCGVISQAIQLF--GQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGIT 344
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
++ LL+ACSH G+ +EGL+YFD + ++ I+ + +HY CL+D+ RAG+L+ A I + +
Sbjct: 345 FLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTM 404
Query: 496 GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAA 555
+ +WG LL+ C GN D+ + ++++EPE+ G Y LL+N+YA +GKW++ +
Sbjct: 405 PMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVS 464
Query: 556 NVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKS 590
+R ++++ +KK PG S +EV N VQ FV GD S
Sbjct: 465 RLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 167/337 (49%), Gaps = 54/337 (16%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGY----IMCGVIK----EARKLFDGPDAMK------ 106
+D A +LF+++ ++ L+ ++I Y + C VI+ RK F+ PD
Sbjct: 58 MDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFK 117
Query: 107 -------------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS 141
VVT AL++ Y+K + + +A ++F EM ER+V S
Sbjct: 118 SCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVIS 177
Query: 142 WNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMR---- 197
WN+++ GYAR GQ +KA LF M ++ +VSW +I + G +A F +M+
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGI 237
Query: 198 ERDVKSWTTMVDGLAINGRVDDARELF----DRMPVRNVVSWNVMIKGYAKNRRLDEALE 253
E D S +++ A G ++ + + R ++ N +I+ Y+K + +A++
Sbjct: 238 EPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQ 297
Query: 254 LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGL 309
LF +M +D+ SW+T+++G+ +G+ + A + F+EM + V IT+ +++ G+
Sbjct: 298 LFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGM 357
Query: 310 SEEALKIFNKLQADHALKP---NTGTFVTVLGACSDL 343
+E L+ F+ ++ D+ ++P + G + VL L
Sbjct: 358 WQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKL 394
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMK- 106
CN I + G I A +LF +M +D+ W TMI+GY G A + F+ K
Sbjct: 279 CNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKV 338
Query: 107 --DVVTWTALVNGYVKLNQIEEAERLFYEMP-----ERNVRSWNTMIDGYARNGQTEKAL 159
+ +T+ L++ + +E R F M E + + +ID AR G+ E+A+
Sbjct: 339 KPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAV 398
Query: 160 DLFRRMPER-NVVSWNTIIKALSECGRIEDAQW---HFNQMRERDVKSWTTMVDGLAING 215
++ + MP + + W +++ + G ++ A H ++ D+ ++ + + A G
Sbjct: 399 EITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLG 458
Query: 216 RVDDARELFDRMPVRN 231
+ +D L R +RN
Sbjct: 459 KWEDVSRL--RKMIRN 472
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 298 bits (764), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 186/636 (29%), Positives = 312/636 (49%), Gaps = 101/636 (15%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF--------D 100
N +S G + DA +LFD MPER+L W +MI + G +E+ L D
Sbjct: 226 NALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGD 285
Query: 101 G---PDAM-------------------------------KDVVTWTALVNGYVKLNQIEE 126
G PD K++V AL++ Y K I
Sbjct: 286 GAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITN 345
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM--------------------- 165
A+ +F +NV SWNTM+ G++ G T D+ R+M
Sbjct: 346 AQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVC 405
Query: 166 ------PE--------------RNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWT 205
P N + N + + ++CG + AQ F+ +R + V SW
Sbjct: 406 FHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWN 465
Query: 206 TMVDGLAINGRVDDARELFDR---------MPVRNVVSWNVMIKGYAKNRRLDEALELF- 255
++ G A + +D R D +P V + K+ RL + + F
Sbjct: 466 ALIGGHA---QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFI 522
Query: 256 -ERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
ERD+ + ++++ +I G+L + LF M K++++W ++TGY+Q+G + AL
Sbjct: 523 IRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRAL 582
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
+F ++ + ++ + + V GACS L L G++ H K ++ ++ +LI+M
Sbjct: 583 GVFRQMVL-YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDM 641
Query: 375 YSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
Y+K G + + ++F+ L+++ SWN MI Y HG KEAI LF +MQ G +D+
Sbjct: 642 YAKNGSITQSSKVFNG--LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDL 699
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII-E 493
T++ +LTAC+H+GL+ EGL+Y D++ + ++ HYAC++D+ GRAG+L +A ++ E
Sbjct: 700 TFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 759
Query: 494 GLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKE 553
+ + + +W LL+ C +H N ++G+ VA K+ ++EPE Y LLSN+YA +GKW++
Sbjct: 760 EMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWED 819
Query: 554 AANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDK 589
VR +M + L+K GCSW+E+ V FVVG++
Sbjct: 820 VRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGER 855
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 129/564 (22%), Positives = 238/564 (42%), Gaps = 101/564 (17%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG------ 101
C I+ G DD+R +FD + ++L W +I+ Y + E + F
Sbjct: 123 CTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTD 182
Query: 102 --PD-------------------------------AMKDVVTWTALVNGYVKLNQIEEAE 128
PD ++DV ALV+ Y + +A
Sbjct: 183 LLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDAL 242
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERN-----VVSWNTIIKALSEC 183
+LF MPERN+ SWN+MI ++ NG +E++ L M E N + T++ L C
Sbjct: 243 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 302
Query: 184 GRIEDA-------QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWN 236
R + W ++++ ++D + G + +A+ +F +NVVSWN
Sbjct: 303 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 362
Query: 237 VMIKGYAKNRRLDEALELFERM----------------------PERDMPSW-------- 266
M+ G++ ++ +M E +PS
Sbjct: 363 TMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSL 422
Query: 267 -----------NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
N V + + G L+ A+++FH + K V +W A++ G+ Q +L
Sbjct: 423 KQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLD 482
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
+++ L P++ T ++L ACS L L G+++H I + + +V +++++Y
Sbjct: 483 AHLQMKIS-GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 541
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
CGEL + +FD + + L+SWN +I Y +G+ A+ +F +M G Q ++
Sbjct: 542 IHCGELCTVQALFDA--MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGIS 599
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY-AC-LVDLCGRAGRLKEAFNIIE 493
+ + ACS + G + LK+ + +D + AC L+D+ + G + ++ +
Sbjct: 600 MMPVFGACSLLPSLRLGREAHAYALKH---LLEDDAFIACSLIDMYAKNGSITQSSKVFN 656
Query: 494 GLGVDLSLSVWGPLLAGCNVHGNA 517
GL + S + W ++ G +HG A
Sbjct: 657 GLK-EKSTASWNAMIMGYGIHGLA 679
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 128/579 (22%), Positives = 234/579 (40%), Gaps = 113/579 (19%)
Query: 93 KEARKLFDGPDAMK-DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYAR 151
++ +L G ++ D V T ++ Y +++ +F + +N+ WN +I Y+R
Sbjct: 104 RKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSR 163
Query: 152 NGQTEKALDLFRRM-------PERNVVSWNTIIKALSECGRIEDA----QWHFNQMRE-- 198
N ++ L+ F M P+ ++ +IKA C + D H ++
Sbjct: 164 NELYDEVLETFIEMISTTDLLPDH--FTYPCVIKA---CAGMSDVGIGLAVHGLVVKTGL 218
Query: 199 -RDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFER 257
DV +V +G V DA +LFD MP RN+VSWN MI+ ++ N +E+ L
Sbjct: 219 VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGE 278
Query: 258 MPERD-----MPSWNTLVT--------------------------------------GFI 274
M E + MP TLVT +
Sbjct: 279 MMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYS 338
Query: 275 QNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQA-DHALKPNTGTF 333
+ G + A+ +F KNV++W M+ G+ G + + ++ A +K + T
Sbjct: 339 KCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTI 398
Query: 334 VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLL 393
+ + C + L +++H K F + V +A + Y+KCG L A+R+F +
Sbjct: 399 LNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHG--I 456
Query: 394 RQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGL 453
R + + SWN +I +A + +++ +M+ G + T LL+ACS + G
Sbjct: 457 RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Query: 454 QYFDKLLKN---RSIQVREDHYACLVDL---CGRAGRLKEAFNIIE-------------- 493
+ +++N R + V Y ++ L CG ++ F+ +E
Sbjct: 517 EVHGFIIRNWLERDLFV----YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGY 572
Query: 494 --------GLGVDLSLSVWG---------PLLAGCNVHGNADIGKLVAKKILK-IEPENA 535
LGV + ++G P+ C++ + +G+ LK + ++A
Sbjct: 573 LQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDA 632
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSW 574
L +MYA G +++ V GLK++ SW
Sbjct: 633 FIACSLIDMYAKNGSITQSSKVF-----NGLKEKSTASW 666
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 349 GQQIHQLIS-KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAA 407
G++IHQL+S T + + + +I MY+ CG +R +FD LR ++L WN +I++
Sbjct: 103 GRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDA--LRSKNLFQWNAVISS 160
Query: 408 YAHHGYGKEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQ 466
Y+ + E + F +M + TY ++ AC+ V GL ++K +
Sbjct: 161 YSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLV- 219
Query: 467 VREDHYA--CLVDLCGRAGRLKEAFNIIE 493
ED + LV G G + +A + +
Sbjct: 220 --EDVFVGNALVSFYGTHGFVTDALQLFD 246
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 298 bits (763), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 169/554 (30%), Positives = 297/554 (53%), Gaps = 39/554 (7%)
Query: 64 ARKLFDRMPERD-LHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLN 122
ARKLFD+ P+RD L +MI Y+ E R+ D +D+ T
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYL------ETRQYPDSFALYRDLRKETCFAPDNFTFT 82
Query: 123 QIEEAERL---FYEMPERNVRSW--NTMIDGYARNGQTEKALDLFRRMPERNVVSWNTII 177
+ ++ L Y+ + + + W D Y G ++
Sbjct: 83 TLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTG----------------------VV 120
Query: 178 KALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMP-VRNVVSWN 236
++ G++ A+ F++M R SWT ++ G G +D A +LFD+MP V++VV +N
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYN 180
Query: 237 VMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
M+ G+ K+ + A LF+ M + + +W T++ G+ D++ A KLF MP++N+++
Sbjct: 181 AMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVS 240
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
W M+ GY Q+ +E +++F ++QA +L P+ T ++VL A SD L+ G+ H +
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFV 300
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
+ + V +A+++MYSKCGE+ A+RIFDE + ++ + SWN MI YA +G +
Sbjct: 301 QRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDE--MPEKQVASWNAMIHGYALNGNARA 358
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
A++LF M + + +++T + ++TAC+H GLVEEG ++F +++ + + +HY C+V
Sbjct: 359 ALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWF-HVMREMGLNAKIEHYGCMV 416
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAG 536
DL GRAG LKEA ++I + + + + L+ C + + + + + KK +++EP+N G
Sbjct: 417 DLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQNDG 476
Query: 537 TYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSEL 596
Y LL N+YA+ +W + V+ M+ KK+ GCS +E+ V F+ GD +H
Sbjct: 477 NYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRS 536
Query: 597 LGYLLLDLHTKMKK 610
+ +L DL M +
Sbjct: 537 IHLVLGDLLMHMNE 550
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 160/314 (50%), Gaps = 14/314 (4%)
Query: 52 ISRLCQEGRIDDARKLFDRMPE-RDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVT 110
IS + G +D A KLFD+MP +D+ ++ M++G++ G + AR+LFD K V+T
Sbjct: 151 ISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEM-THKTVIT 209
Query: 111 WTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP---- 166
WT +++GY + I+ A +LF MPERN+ SWNTMI GY +N Q ++ + LF+ M
Sbjct: 210 WTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTS 269
Query: 167 -ERNVVSWNTIIKALSECGRIEDAQW--HFNQMRERD--VKSWTTMVDGLAINGRVDDAR 221
+ + V+ +++ A+S+ G + +W F Q ++ D VK T ++D + G ++ A+
Sbjct: 270 LDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAK 329
Query: 222 ELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTL---VTGFIQNGD 278
+FD MP + V SWN MI GYA N AL+LF M + P T+ +T G
Sbjct: 330 RIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITACNHGGL 389
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
+ K FH M + + V +LK L + +PN + L
Sbjct: 390 VEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLS 449
Query: 339 ACSDLAGLNEGQQI 352
AC + ++I
Sbjct: 450 ACGQYKDIERAERI 463
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 106/233 (45%), Gaps = 46/233 (19%)
Query: 42 HSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD- 100
H + T I C ID ARKLFD MPER+L W TMI GY +E +LF
Sbjct: 204 HKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQE 263
Query: 101 -------GPDAM-------------------------------KDVVTWTALVNGYVKLN 122
PD + K V TA+++ Y K
Sbjct: 264 MQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCG 323
Query: 123 QIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM---PERNVVSWNTIIKA 179
+IE+A+R+F EMPE+ V SWN MI GYA NG ALDLF M + + ++ +I A
Sbjct: 324 EIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDEITMLAVITA 383
Query: 180 LSECGRIEDAQWHFNQMRE----RDVKSWTTMVDGLAINGRVDDARELFDRMP 228
+ G +E+ + F+ MRE ++ + MVD L G + +A +L MP
Sbjct: 384 CNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMP 436
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 122/287 (42%), Gaps = 51/287 (17%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKD 107
N + + G + AR+LFD M + + W TMI+GY I ARKLFD P+ ++
Sbjct: 180 NAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPE--RN 237
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMP-------------------------------- 135
+V+W ++ GY + Q +E RLF EM
Sbjct: 238 LVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCH 297
Query: 136 --------ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIE 187
++ V+ ++D Y++ G+ EKA +F MPE+ V SWN +I + G
Sbjct: 298 CFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNAR 357
Query: 188 DAQWHFNQMRERDVKSWTTMVDGL-AIN--GRVDDARELFDRMPV----RNVVSWNVMIK 240
A F M + TM+ + A N G V++ R+ F M + + M+
Sbjct: 358 AALDLFVTMMIEEKPDEITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVD 417
Query: 241 GYAKNRRLDEALELFERMP-ERDMPSWNTLVTGFIQNGDLNRAEKLF 286
+ L EA +L MP E + ++ ++ Q D+ RAE++
Sbjct: 418 LLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERIL 464
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF- 99
L +K C + + G I+ A+++FD MPE+ + W MI+GY + G + A LF
Sbjct: 305 LDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFV 364
Query: 100 -----DGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE----RNVRSWNTMIDGYA 150
+ PD + + TA +G + +EE + F+ M E + + M+D
Sbjct: 365 TMMIEEKPDEITMLAVITACNHGGL----VEEGRKWFHVMREMGLNAKIEHYGCMVDLLG 420
Query: 151 RNGQTEKALDLFRRMP-ERNVVSWNTIIKALSECGRIEDAQ 190
R G ++A DL MP E N + ++ LS CG+ +D +
Sbjct: 421 RAGSLKEAEDLITNMPFEPNGIILSSF---LSACGQYKDIE 458
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/692 (27%), Positives = 343/692 (49%), Gaps = 102/692 (14%)
Query: 14 APKLKTHPTFI-----INGYPFLRTMSTSTSSLHSAMKDCN-----TSISRLCQEGRIDD 63
+P + T P + + + + +S + SSL DCN + I + G+ID
Sbjct: 135 SPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG---MDCNEFVASSLIKAYLEYGKIDV 191
Query: 64 ARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAMK-DVVTWT--- 112
KLFDR+ ++D +W M+NGY CG + K F P+A+ D V
Sbjct: 192 PSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCAS 251
Query: 113 ---------------------------ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTM 145
+L++ Y K + ++A +LF M + +WN M
Sbjct: 252 KLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCM 311
Query: 146 IDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIEDA-QWHFNQMRER- 199
I GY ++G E++L F M V +++++++ ++S+ +E Q H MR
Sbjct: 312 ISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSI 371
Query: 200 --DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFER 257
D+ + ++D V A+ +F + +VV + MI GY N ++LE+F
Sbjct: 372 SLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRW 431
Query: 258 MPERDM-PSWNTLVT------------------GFI--------------------QNGD 278
+ + + P+ TLV+ GFI + G
Sbjct: 432 LVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGR 491
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
+N A ++F + ++++++W +M+T Q A+ IF ++ + + + L
Sbjct: 492 MNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVS-GICYDCVSISAALS 550
Query: 339 ACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDL 398
AC++L + G+ IH + K + Y S LI+MY+KCG L A +F ++++++
Sbjct: 551 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKT--MKEKNI 608
Query: 399 ISWNGMIAAYAHHGYGKEAINLFNKMQE-LGFQANDVTYVELLTACSHAGLVEEGLQYFD 457
+SWN +IAA +HG K+++ LF++M E G + + +T++E++++C H G V+EG+++F
Sbjct: 609 VSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFR 668
Query: 458 KLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNA 517
+ ++ IQ +++HYAC+VDL GRAGRL EA+ ++ + VWG LL C +H N
Sbjct: 669 SMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNV 728
Query: 518 DIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEV 577
++ ++ + K++ ++P N+G Y L+SN +A+ +W+ VR MK++ ++K PG SW+E+
Sbjct: 729 ELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEI 788
Query: 578 GNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
+FV GD +H +S + LL L +++
Sbjct: 789 NKRTHLFVSGDVNHPESSHIYSLLNSLLGELR 820
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/544 (22%), Positives = 230/544 (42%), Gaps = 88/544 (16%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPER--NVRSWNTMIDGYARNGQTEKALDLFRR 164
D T ++ Y + ++FY + R ++R WN++I + RNG +AL + +
Sbjct: 69 DSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFK 128
Query: 165 M----PERNVVSWNTIIKALSECGRIEDAQWHFNQMRE--RDVKSW--TTMVDGLAINGR 216
M +V ++ ++KA + + + + D + ++++ G+
Sbjct: 129 MLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGK 188
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP-ERDMPSW--------- 266
+D +LFDR+ ++ V WNVM+ GYAK LD ++ F M ++ P+
Sbjct: 189 IDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSV 248
Query: 267 -----------------------------NTLVTGFIQNGDLNRAEKLFHEMPQKNVITW 297
N+L++ + + G + A KLF M + + +TW
Sbjct: 249 CASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTW 308
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
M++GYVQ GL EE+L F ++ + L P+ TF ++L + S L +QIH I
Sbjct: 309 NCMISGYVQSGLMEESLTFFYEMISSGVL-PDAITFSSLLPSVSKFENLEYCKQIHCYIM 367
Query: 358 KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEA 417
+ + ++ SALI+ Y KC + +A+ IF + D++ + MI+ Y H+G ++
Sbjct: 368 RHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQ--CNSVDVVVFTAMISGYLHNGLYIDS 425
Query: 418 INLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD 477
+ +F + ++ N++T V +L ++ G + ++K + R + ++D
Sbjct: 426 LEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK-KGFDNRCNIGCAVID 484
Query: 478 LCGRAGRLKEAFNIIEGL----------------------------------GVDLSLSV 503
+ + GR+ A+ I E L G+
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 504 WGPLLAGCNVHGNADIGKLVAKKILKIE-PENAGTYSLLSNMYASVGKWKEAANVRMKMK 562
L+ C + GK + ++K + + S L +MYA G K A NV MK
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK 604
Query: 563 DKGL 566
+K +
Sbjct: 605 EKNI 608
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%)
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ 395
+L ACS+ L +G+Q+H + + +Y ++ MY+ CG ++F LR+
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
+ WN +I+++ +G +A+ + KM G + T+ L+ AC
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/558 (31%), Positives = 301/558 (53%), Gaps = 62/558 (11%)
Query: 85 GYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT 144
G + C ++K L +++T L++ Y K + A ++F MPERNV SW+
Sbjct: 26 GQVHCYLLKSGSGL--------NLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSA 77
Query: 145 MIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDA-QWHFNQMR-- 197
++ G+ NG + +L LF M + N +++T +KA +E Q H ++
Sbjct: 78 LMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG 137
Query: 198 -ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFE 256
E V+ ++VD + GR+++A ++F R+ R+++SWN MI G+ +AL+ F
Sbjct: 138 FEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG 197
Query: 257 RMPERDM---------------------------------------PSWNT----LVTGF 273
M E ++ PS T LV +
Sbjct: 198 MMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLY 257
Query: 274 IQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
++ G L A K F ++ +K +I+W++++ GY Q G EA+ +F +LQ ++ + ++
Sbjct: 258 VKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNS-QIDSFAL 316
Query: 334 VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLL 393
+++G +D A L +G+Q+ L K T V++++++MY KCG + A + F E +
Sbjct: 317 SSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAE--M 374
Query: 394 RQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGL 453
+ +D+ISW +I Y HG GK+++ +F +M + ++V Y+ +L+ACSH+G+++EG
Sbjct: 375 QLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGE 434
Query: 454 QYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNV 513
+ F KLL+ I+ R +HYAC+VDL GRAGRLKEA ++I+ + + ++ +W LL+ C V
Sbjct: 435 ELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRV 494
Query: 514 HGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 573
HG+ ++GK V K +L+I+ +N Y ++SN+Y G W E N R KGLKK+ G S
Sbjct: 495 HGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMS 554
Query: 574 WVEVGNTVQVFVVGDKSH 591
WVE+ V F G+ SH
Sbjct: 555 WVEIEREVHFFRSGEDSH 572
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 165/330 (50%), Gaps = 23/330 (6%)
Query: 81 TMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
++++ Y CG I EA K+F + +++W A++ G+V +A F M E N++
Sbjct: 147 SLVDMYSKCGRINEAEKVFR-RIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 141 ------SWNTMIDGYARNGQ--TEKALDLFRRMPERNVVSWNTIIKALSE----CGRIED 188
+ +++ + G K + F + S TI +L + CG +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 189 AQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRN-------VVSWNVMIKG 241
A+ F+Q++E+ + SW++++ G A G +A LF R+ N + S +
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 242 YAKNRRLDEALELFERMPER-DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAM 300
+A R+ + L ++P + N++V +++ G ++ AEK F EM K+VI+WT +
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI-HQLISKT 359
+TGY +HGL +++++IF ++ H ++P+ ++ VL ACS + EG+++ +L+
Sbjct: 386 ITGYGKHGLGKKSVRIFYEM-LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH 444
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFD 389
+ + ++++ + G L A+ + D
Sbjct: 445 GIKPRVEHYACVVDLLGRAGRLKEAKHLID 474
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 185/420 (44%), Gaps = 77/420 (18%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF--------- 99
N+ + + GRI++A K+F R+ +R L W MI G++ G +A F
Sbjct: 146 NSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK 205
Query: 100 DGPDAM---------------------------------KDVVTWTALVNGYVKLNQIEE 126
+ PD +LV+ YVK +
Sbjct: 206 ERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFS 265
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERN----VVSWNTIIKALSE 182
A + F ++ E+ + SW+++I GYA+ G+ +A+ LF+R+ E N + ++II ++
Sbjct: 266 ARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD 325
Query: 183 CGRIEDAQWHFNQMRERDVK--------SWTTMVDGLAINGRVDDARELFDRMPVRNVVS 234
+ + QM+ VK ++VD G VD+A + F M +++V+S
Sbjct: 326 FALLRQGK----QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVIS 381
Query: 235 WNVMIKGYAKNRRLDEALELFERM----PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP 290
W V+I GY K+ +++ +F M E D + +++ +G + E+LF ++
Sbjct: 382 WTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLL 441
Query: 291 QKNVIT-----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAG 345
+ + I + ++ + G +EA + + + +KPN G + T+L C
Sbjct: 442 ETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTM----PIKPNVGIWQTLLSLCRVHGD 497
Query: 346 LNEGQQIHQLISKT-AFQESTYVVSALINMYSKCG---ELHIARRIFDEGLLRQRDLISW 401
+ G+++ +++ + A + YV+ + N+Y + G E AR + + L++ +SW
Sbjct: 498 IELGKEVGKILLRIDAKNPANYVMMS--NLYGQAGYWNEQGNARELGNIKGLKKEAGMSW 555
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 95/178 (53%), Gaps = 4/178 (2%)
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
V++L C+ ++G Q+H + K+ + + LI+MY KC E +A ++FD
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDS-- 66
Query: 393 LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
+ +R+++SW+ +++ + +G K +++LF++M G N+ T+ L AC +E+G
Sbjct: 67 MPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKG 126
Query: 453 LQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
LQ LK ++ + LVD+ + GR+ EA + + VD SL W ++AG
Sbjct: 127 LQIHGFCLK-IGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRI-VDRSLISWNAMIAG 182
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 297 bits (760), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 183/646 (28%), Positives = 319/646 (49%), Gaps = 87/646 (13%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG------- 101
N + + G + AR++FD MP RDL W ++I+GY G +EA +++
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 102 PDAMKDVVTWTA-------------------------------LVNGYVKLNQIEEAERL 130
PD+ A LV Y+K + +A R+
Sbjct: 205 PDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRV 264
Query: 131 FYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIED-- 188
F EM R+ S+NTMI GY + E+++ +F ++ T+ L CG + D
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLS 324
Query: 189 -AQWHFNQMRERDVKSWTT----MVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
A++ +N M + +T ++D A G + AR++F+ M ++ VSWN +I GY
Sbjct: 325 LAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYI 384
Query: 244 KNRRLDEALELFERM---PER------------------------------------DMP 264
++ L EA++LF+ M E+ D+
Sbjct: 385 QSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLS 444
Query: 265 SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
N L+ + + G++ + K+F M + +TW +++ V+ G L++ +++
Sbjct: 445 VSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSE 504
Query: 325 ALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIA 384
+ P+ TF+ L C+ LA G++IH + + ++ + +ALI MYSKCG L +
Sbjct: 505 VV-PDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENS 563
Query: 385 RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACS 444
R+F+ + +RD+++W GMI AY +G G++A+ F M++ G + V ++ ++ ACS
Sbjct: 564 SRVFER--MSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS 621
Query: 445 HAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVW 504
H+GLV+EGL F+K+ + I +HYAC+VDL R+ ++ +A I+ + + S+W
Sbjct: 622 HSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIW 681
Query: 505 GPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 564
+L C G+ + + V+++I+++ P++ G L SN YA++ KW + + +R +KDK
Sbjct: 682 ASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDK 741
Query: 565 GLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
+ K PG SW+EVG V VF GD S QSE + L L++ M K
Sbjct: 742 HITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAK 787
Score = 156 bits (394), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 119/486 (24%), Positives = 234/486 (48%), Gaps = 57/486 (11%)
Query: 114 LVNGYVKLNQIEEAERLFYEM-PERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-- 170
L++ Y + + +F + P +NV WN++I +++NG +AL+ + ++ E V
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 171 --VSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELF 224
++ ++IKA + E + Q+ E D+ +VD + G + AR++F
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 225 DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM------PE-----RDMPSWNT----- 268
D MPVR++VSWN +I GY+ + +EALE++ + P+ +P++
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 269 -----------------------LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYV 305
LV +++ A ++F EM ++ +++ M+ GY+
Sbjct: 225 QGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYL 284
Query: 306 QHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQEST 365
+ + EE++++F L+ KP+ T +VL AC L L+ + I+ + K F +
Sbjct: 285 KLEMVEESVRMF--LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLES 342
Query: 366 YVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQ 425
V + LI++Y+KCG++ AR +F+ + +D +SWN +I+ Y G EA+ LF M
Sbjct: 343 TVRNILIDVYAKCGDMITARDVFNS--MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Query: 426 ELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRL 485
+ QA+ +TY+ L++ + ++ G +K+ I + L+D+ + G +
Sbjct: 401 IMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS-GICIDLSVSNALIDMYAKCGEV 459
Query: 486 KEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIE--PENAGTYSLLSN 543
++ I +G +++ W +++ C G+ G V ++ K E P+ A T+ +
Sbjct: 460 GDSLKIFSSMGTGDTVT-WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMA-TFLVTLP 517
Query: 544 MYASVG 549
M AS+
Sbjct: 518 MCASLA 523
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 214/489 (43%), Gaps = 81/489 (16%)
Query: 24 IINGYPFLRTMSTSTSSLH--SAMKDC---NTSISRLCQEGRIDDARKLFDRMPERDLHL 78
+I+ Y R ++S S S K+ N+ I + G +A + + ++ E +
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVS- 103
Query: 79 WGTMINGYIMCGVIKEARKLFDGP--DAM----------KDVVTWTALVNGYVKLNQIEE 126
+ Y VIK LFD D + D+ ALV+ Y ++ +
Sbjct: 104 ----PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTR 159
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIKALSE 182
A ++F EMP R++ SWN++I GY+ +G E+AL+++ + +V + ++++ A
Sbjct: 160 ARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGN 219
Query: 183 CGRIEDAQ----WHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVM 238
++ Q + V +V R DAR +FD M VR+ VS+N M
Sbjct: 220 LLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTM 279
Query: 239 IKGYAKNRRLDEALELFERMPERDMPSW-------------------------------- 266
I GY K ++E++ +F ++ P
Sbjct: 280 ICGYLKLEMVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 267 ------NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKL 320
N L+ + + GD+ A +F+ M K+ ++W ++++GY+Q G EA+K+F +
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 321 -----QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
QADH T++ ++ + LA L G+ +H K+ V +ALI+MY
Sbjct: 400 MIMEEQADHI------TYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMY 453
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
+KCGE+ + +IF + D ++WN +I+A G + + +M++ + T
Sbjct: 454 AKCGEVGDSLKIFSS--MGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMAT 511
Query: 436 YVELLTACS 444
++ L C+
Sbjct: 512 FLVTLPMCA 520
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 84/183 (45%), Gaps = 15/183 (8%)
Query: 339 ACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE----LHIARRIFDEGLLR 394
A S + LNE ++IH L+ S + LI+ YS E L + RR+
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSP----- 67
Query: 395 QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
+++ WN +I A++ +G EA+ + K++E + T+ ++ AC+ E G
Sbjct: 68 AKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDL 127
Query: 455 YFDKLLKNRSIQVREDHYA--CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN 512
++++L + D + LVD+ R G L A + + + V L W L++G +
Sbjct: 128 VYEQIL---DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYS 183
Query: 513 VHG 515
HG
Sbjct: 184 SHG 186
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 183/594 (30%), Positives = 294/594 (49%), Gaps = 55/594 (9%)
Query: 64 ARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNGYVKLN 122
AR++FDR+P+ +L W ++ Y G+I E F+ PD +D VTW L+ GY
Sbjct: 60 ARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPD--RDGVTWNVLIEGYSLSG 117
Query: 123 QIEEAERLFYEM--------------------PERNVRSWNTMIDG-------------- 148
+ A + + M S I G
Sbjct: 118 LVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 177
Query: 149 ------YARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK 202
YA G A +F + +RN V +N+++ L CG IEDA F M E+D
Sbjct: 178 SPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGM-EKDSV 236
Query: 203 SWTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERM 258
SW M+ GLA NG +A E F M V+ + + ++ ++E ++ +
Sbjct: 237 SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI 296
Query: 259 PERDMPS----WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
+ + L+ + + L+ A+ +F M QKNV++WTAM+ GY Q G +EEA+
Sbjct: 297 IRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAV 356
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
KIF +Q + P+ T + AC++++ L EG Q H + V ++L+ +
Sbjct: 357 KIFLDMQRS-GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 375 YSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
Y KCG++ + R+F+E + RD +SW M++AYA G E I LF+KM + G + + V
Sbjct: 416 YGKCGDIDDSTRLFNE--MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGV 473
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEG 494
T +++ACS AGLVE+G +YF + I HY+C++DL R+GRL+EA I G
Sbjct: 474 TLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533
Query: 495 LGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEA 554
+ W LL+ C GN +IGK A+ +++++P + Y+LLS++YAS GKW
Sbjct: 534 MPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSV 593
Query: 555 ANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKM 608
A +R M++K +KK+PG SW++ + F D+S + + L +L+ K+
Sbjct: 594 AQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKI 647
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/421 (28%), Positives = 222/421 (52%), Gaps = 25/421 (5%)
Query: 111 WTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV 170
+ +V+ Y + A R+F +P+ N+ SWN ++ Y++ G + F ++P+R+
Sbjct: 44 YNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDG 103
Query: 171 VSWNTIIKALSECGRIEDAQWHFNQMRERDVK------SWTTMVDGLAINGRVDDARELF 224
V+WN +I+ S G + A +N M RD + TM+ + NG V +++
Sbjct: 104 VTWNVLIEGYSLSGLVGAAVKAYNTMM-RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIH 162
Query: 225 DRMPVRNVVSW----NVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLN 280
++ S+ + ++ YA + +A ++F + +R+ +N+L+ G + G +
Sbjct: 163 GQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIE 222
Query: 281 RAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC 340
A +LF M +K+ ++W AM+ G Q+GL++EA++ F +++ LK + F +VL AC
Sbjct: 223 DALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKV-QGLKMDQYPFGSVLPAC 280
Query: 341 SDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS 400
L +NEG+QIH I +T FQ+ YV SALI+MY KC LH A+ +FD ++Q++++S
Sbjct: 281 GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR--MKQKNVVS 338
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLL 460
W M+ Y G +EA+ +F MQ G + T + ++AC++ +EEG Q+ K +
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 461 KNRSIQVREDHYA----CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN 516
+ I HY LV L G+ G + ++ + + V ++S W +++ G
Sbjct: 399 TSGLI-----HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS-WTAMVSAYAQFGR 452
Query: 517 A 517
A
Sbjct: 453 A 453
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 213/450 (47%), Gaps = 65/450 (14%)
Query: 24 IINGYPFLRTMSTSTSSLHSAMKDCNTSISRLC---------QEGRIDDARKLFDRMP-- 72
+I GY + + + ++ M+D + +++R+ G + +++ ++
Sbjct: 109 LIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKL 168
Query: 73 --ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERL 130
E L + ++ Y G I +A+K+F G D ++ V + +L+ G + IE+A +L
Sbjct: 169 GFESYLLVGSPLLYMYANVGCISDAKKVFYGLDD-RNTVMYNSLMGGLLACGMIEDALQL 227
Query: 131 FYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRI 186
F M E++ SW MI G A+NG ++A++ FR M + + + +++ A G I
Sbjct: 228 FRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAI 286
Query: 187 -EDAQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGY 242
E Q H +R + + + ++D + A+ +FDRM +NVVSW M+ GY
Sbjct: 287 NEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGY 346
Query: 243 AKNRRLDEALELFERMPERDMPS------------------------------------- 265
+ R +EA+++F M +
Sbjct: 347 GQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYV 406
Query: 266 --WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
N+LVT + + GD++ + +LF+EM ++ ++WTAM++ Y Q G + E +++F+K+
Sbjct: 407 TVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKM-VQ 465
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI-SKTAFQESTYVVSALINMYSKCGELH 382
H LKP+ T V+ ACS + +GQ+ +L+ S+ S S +I+++S+ G L
Sbjct: 466 HGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLE 525
Query: 383 IARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
A R F G+ D I W +++A + G
Sbjct: 526 EAMR-FINGMPFPPDAIGWTTLLSACRNKG 554
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 28/256 (10%)
Query: 227 MPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLF 286
+P +N ++ YA + A +F+R+P+ ++ SWN L+ + + G ++ E F
Sbjct: 36 LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTF 95
Query: 287 HEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGL 346
++P ++ +TW ++ GY GL A+K +N + D + T +T+L S +
Sbjct: 96 EKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHV 155
Query: 347 NEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF---DE-----------GL 392
+ G+QIH + K F+ V S L+ MY+ G + A+++F D+ GL
Sbjct: 156 SLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGL 215
Query: 393 LR--------------QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVE 438
L ++D +SW MI A +G KEAI F +M+ G + + +
Sbjct: 216 LACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGS 275
Query: 439 LLTACSHAGLVEEGLQ 454
+L AC G + EG Q
Sbjct: 276 VLPACGGLGAINEGKQ 291
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 142/349 (40%), Gaps = 67/349 (19%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DGPDA-- 104
I C+ + A+ +FDRM ++++ W M+ GY G +EA K+F G D
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDH 371
Query: 105 -------------------------------MKDVVTWTALVNGYVKLNQIEEAERLFYE 133
+ V +LV Y K I+++ RLF E
Sbjct: 372 YTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNE 431
Query: 134 MPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIEDA 189
M R+ SW M+ YA+ G+ + + LF +M + + V+ +I A S G +E
Sbjct: 432 MNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG 491
Query: 190 QWHFNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPV-RNVVSWNVMIKGYA 243
Q +F M + ++ M+D + +GR+++A + MP + + W ++
Sbjct: 492 QRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACR 551
Query: 244 KNRRLDEALELFERMPERD--MPSWNTLVTG-FIQNGDLNRAEKLFHEMPQKNV------ 294
L+ E + E D P+ TL++ + G + +L M +KNV
Sbjct: 552 NKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQ 611
Query: 295 --ITWTAMMTGYVQHGLSEEAL-KIFNKLQA------DHALKPNTGTFV 334
I W + + S L +I+ KL+ D+ KP+T +FV
Sbjct: 612 SWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDT-SFV 659
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 38 TSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARK 97
TS L + N+ ++ + G IDD+ +LF+ M RD W M++ Y G E +
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 98 LFDG--PDAMK-DVVTWTALVNGYVKLNQIEEAERLFYEMPER-----NVRSWNTMIDGY 149
LFD +K D VT T +++ + +E+ +R F M ++ ++ MID +
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518
Query: 150 ARNGQTEKALDLFRRMP-ERNVVSWNTIIKALSECGRIEDAQWHFNQMRERD---VKSWT 205
+R+G+ E+A+ MP + + W T++ A G +E +W + E D +T
Sbjct: 519 SRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYT 578
Query: 206 TMVDGLAINGRVDDARELFDRMPVRNV 232
+ A G+ D +L M +NV
Sbjct: 579 LLSSIYASKGKWDSVAQLRRGMREKNV 605
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 295 bits (756), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 182/595 (30%), Positives = 309/595 (51%), Gaps = 51/595 (8%)
Query: 24 IINGYPFLRTMSTSTSSLHSAMK----DCNTSISRLCQEGRIDDARKLFDRMPERDLHLW 79
++N Y R ++ + S K N + + R+ DA KLFD MPER +
Sbjct: 82 VLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSY 141
Query: 80 GTMINGYIMCGVIKEARKLF---DGPDAMKDVVTWTALVNGYVKLNQI------------ 124
T+I GY EA +LF M + VT +++ L I
Sbjct: 142 TTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIK 201
Query: 125 -----------------------EEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL 161
++A +LF EMPERN+ +WN M++GY++ G E+A +L
Sbjct: 202 LKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEEL 261
Query: 162 FRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK-SWTTMVDGLAINGR---V 217
F ++ E+++VSW T+I ++++A ++ +M +K S MVD L+ + R
Sbjct: 262 FDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGS 321
Query: 218 DDARELFDRMPVRNVVSWNVM----IKGYAKNRRLDEALELFERMPERDMPSWNTLVTGF 273
+L + R ++ + I YA + + AL+ FE + + S N L+ GF
Sbjct: 322 SKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGF 381
Query: 274 IQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
++NG + +A ++F + K++ +W AM++GY Q + AL +F ++ + +KP+ T
Sbjct: 382 VKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITM 441
Query: 334 VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLL 393
V+V A S L L EG++ H ++ + + + +A+I+MY+KCG + A IF +
Sbjct: 442 VSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKN 501
Query: 394 RQRDLIS-WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
IS WN +I A HG+ K A++L++ +Q L + N +T+V +L+AC HAGLVE G
Sbjct: 502 ISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELG 561
Query: 453 LQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN 512
YF+ + + I+ HY C+VDL G+AGRL+EA +I+ + V + +WG LL+
Sbjct: 562 KTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASR 621
Query: 513 VHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
HGN +I +L A ++ I+P + G +LSN+YA G+W++ A VR +M+ + ++
Sbjct: 622 THGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTRDVE 676
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 231/531 (43%), Gaps = 112/531 (21%)
Query: 87 IMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMI 146
+ CG R L G D+ + +++N Y K + +AE +F + + + S+N M+
Sbjct: 57 VTCGRQIHCRVLKSGLDSNGYICN--SVLNMYAKCRLLADAESVFRDHAKLDSASFNIMV 114
Query: 147 DGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER------- 199
DGY R+ + AL LF MPER+ VS+ T+IK ++ + +A F +MR
Sbjct: 115 DGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEV 174
Query: 200 ----------------DVKSWTTMVDGLAINGRV----------------DDARELFDRM 227
D + ++ L + GRV DAR+LFD M
Sbjct: 175 TLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEM 234
Query: 228 PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFH 287
P RN+V+WNVM+ GY+K +++A ELF+++ E+D+ SW T++ G ++ L+ A +
Sbjct: 235 PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 294
Query: 288 EMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLN 347
EM + +KP+ V +L A + G +
Sbjct: 295 EMLRC--------------------------------GMKPSEVMMVDLLSASARSVGSS 322
Query: 348 EGQQIHQLISKTAFQESTYVVSALINMYS------------------------------- 376
+G Q+H I K F ++ + +I+ Y+
Sbjct: 323 KGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFV 382
Query: 377 KCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM-QELGFQANDVT 435
K G + AR +FD+ +D+ SWN MI+ YA + A++LF +M + + +T
Sbjct: 383 KNGMVEQAREVFDQ--THDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAIT 440
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
V + +A S G +EEG + D L +I ++ A ++D+ + G ++ A NI
Sbjct: 441 MVSVFSAISSLGSLEEGKRAHD-YLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQT 499
Query: 496 G--VDLSLSVWGPLLAGCNVHGNADIGKLVAKKI--LKIEPENAGTYSLLS 542
++S W ++ G HG+A + + + L I+P + +LS
Sbjct: 500 KNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLS 550
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 121/288 (42%), Gaps = 74/288 (25%)
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFD-- 389
V+ LG+C+ + G+QIH + K+ + Y+ ++++NMY+KC L A +F
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 390 ------------EGLLRQRDL---------------ISWNGMIAAYAHHGYGKEAINLFN 422
+G +R R L +S+ +I YA + EA+ LF
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRED----------HY 472
+M+ LG N+VT +++ACSH G + + ++L++ +I+++ + H
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDC-----RMLQSLAIKLKLEGRVFVSTNLLHM 217
Query: 473 ACLVDLC--------------------------GRAGRLKEAFNIIEGLGVDLSLSVWGP 506
CL LC +AG +++A + + + + + WG
Sbjct: 218 YCLC-LCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQI-TEKDIVSWGT 275
Query: 507 LLAGCNVHGNADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGKWK 552
++ GC D + ++L+ ++P LLS SVG K
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSK 323
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/458 (32%), Positives = 265/458 (57%), Gaps = 34/458 (7%)
Query: 142 WNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKALSECGRIEDAQWHFNQMR 197
WN MI G++ + + E++L L++RM N ++ +++KA S E+ Q+
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 198 ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFER 257
+ ++ +V + N +I YA A LF+R
Sbjct: 143 KLGYEN---------------------------DVYAVNSLINSYAVTGNFKLAHLLFDR 175
Query: 258 MPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIF 317
+PE D SWN+++ G+++ G ++ A LF +M +KN I+WT M++GYVQ +++EAL++F
Sbjct: 176 IPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLF 235
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
+++Q + ++P+ + L AC+ L L +G+ IH ++KT + + + LI+MY+K
Sbjct: 236 HEMQ-NSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAK 294
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
CGE+ A +F ++++ + +W +I+ YA+HG+G+EAI+ F +MQ++G + N +T+
Sbjct: 295 CGEMEEALEVFKN--IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFT 352
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGV 497
+LTACS+ GLVEEG F + ++ +++ +HY C+VDL GRAG L EA I+ + +
Sbjct: 353 AVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPL 412
Query: 498 DLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANV 557
+ +WG LL C +H N ++G+ + + ++ I+P + G Y +N++A KW +AA
Sbjct: 413 KPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAET 472
Query: 558 RMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
R MK++G+ K PGCS + + T F+ GD+SH + E
Sbjct: 473 RRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIE 510
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 169/364 (46%), Gaps = 18/364 (4%)
Query: 64 ARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDVVTWTALVNGYVK 120
A+ +FD D LW MI G+ + + L+ A + T+ +L+
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 121 LNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTI 176
L+ EE ++ ++ E +V + N++I+ YA G + A LF R+PE + VSWN++
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 177 IKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWN 236
IK + G+++ A F +M E++ SWTTM+ G +A +LF M +V N
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 237 VMIKGYAKNRRLDEALE--------LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHE 288
V + ALE L + D L+ + + G++ A ++F
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 289 MPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
+ +K+V WTA+++GY HG EA+ F ++Q +KPN TF VL ACS + E
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQ-KMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 349 GQQI-HQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAA 407
G+ I + + + + ++++ + G L A+R E L+ +I W ++ A
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVI-WGALLKA 425
Query: 408 YAHH 411
H
Sbjct: 426 CRIH 429
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 62/297 (20%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
N+ I+ G A LFDR+PE D W ++I GY+ G + A LF A K+
Sbjct: 154 NSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKM-AEKNA 212
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER 168
++WT +++GYV+ + +EA +LF+EM +V E
Sbjct: 213 ISWTTMISGYVQADMNKEALQLFHEMQNSDV---------------------------EP 245
Query: 169 NVVSWNTIIKALSECGRIEDAQW---HFNQMRER-DVKSWTTMVDGLAINGRVDDARELF 224
+ VS + A ++ G +E +W + N+ R R D ++D A G +++A E+F
Sbjct: 246 DNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVF 305
Query: 225 DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEK 284
+ ++V +W +I GYA + EA+ F M + +
Sbjct: 306 KNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGI--------------------- 344
Query: 285 LFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNT---GTFVTVLG 338
+ NVIT+TA++T GL EE IF ++ D+ LKP G V +LG
Sbjct: 345 ------KPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLG 395
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 54/261 (20%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------G 101
N+ I + G++D A LF +M E++ W TMI+GY+ + KEA +LF
Sbjct: 185 NSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVE 244
Query: 102 PDAMK-------------------------------DVVTWTALVNGYVKLNQIEEAERL 130
PD + D V L++ Y K ++EEA +
Sbjct: 245 PDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEV 304
Query: 131 FYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRI 186
F + +++V++W +I GYA +G +A+ F M + NV+++ ++ A S G +
Sbjct: 305 FKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLV 364
Query: 187 EDAQWHFNQMRERD------VKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMI 239
E+ + F M ERD ++ + +VD L G +D+A+ MP++ N V W ++
Sbjct: 365 EEGKLIFYSM-ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Query: 240 KGYAKNRRLDEALELFERMPE 260
K R+ + +EL E + E
Sbjct: 424 KAC----RIHKNIELGEEIGE 440
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 291/535 (54%), Gaps = 56/535 (10%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM------P 166
+L+N Y KL + A +F M ER++ SWN++I G A+NG +A+ LF ++ P
Sbjct: 355 SLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKP 414
Query: 167 ERNVVSWNTIIKALSEC--GRIEDAQWHFNQMRERDVKSW---TTMVDGLAINGRVDDAR 221
++ ++ +++KA S G Q H + ++ +V T ++D + N + +A
Sbjct: 415 DQYTMT--SVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE 472
Query: 222 ELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER-------------------- 261
LF+R ++V+WN M+ GY ++ + L+LF M ++
Sbjct: 473 ILFERHNF-DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLF 531
Query: 262 -----------------DMPSW--NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMT 302
D+ W + ++ +++ GD++ A+ F +P + + WT M++
Sbjct: 532 AINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMIS 591
Query: 303 GYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQ 362
G +++G E A +F++++ L P+ T T+ A S L L +G+QIH K
Sbjct: 592 GCIENGEEERAFHVFSQMRLMGVL-PDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 650
Query: 363 ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
+V ++L++MY+KCG + A +F + ++ +WN M+ A HG GKE + LF
Sbjct: 651 NDPFVGTSLVDMYAKCGSIDDAYCLFKR--IEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRA 482
+M+ LG + + VT++ +L+ACSH+GLV E ++ + + I+ +HY+CL D GRA
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 483 GRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLS 542
G +K+A N+IE + ++ S S++ LLA C V G+ + GK VA K+L++EP ++ Y LLS
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 543 NMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELL 597
NMYA+ KW E R MK +KK PG SW+EV N + +FVV D+S+ Q+EL+
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELI 883
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/578 (22%), Positives = 237/578 (41%), Gaps = 84/578 (14%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL---FDGPDAMKDVVTWTAL- 114
G++ + + LF+ MP RD+ LW M+ Y+ G +EA L F + +T L
Sbjct: 194 GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLA 253
Query: 115 -----------VNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFR 163
V + N + + N + Y +GQ L F
Sbjct: 254 RISGDDSDAGQVKSFANGNDASSVSEIIFR---------NKGLSEYLHSGQYSALLKCFA 304
Query: 164 RMPERNV-VSWNTIIKALSECGRIED----AQWHFNQMR---ERDVKSWTTMVDGLAING 215
M E +V T I L+ +++ Q H ++ + + ++++
Sbjct: 305 DMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLR 364
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELF-------------------- 255
+ AR +FD M R+++SWN +I G A+N EA+ LF
Sbjct: 365 KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLK 424
Query: 256 --ERMPE------------------RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI 295
+PE D L+ + +N + AE LF E +++
Sbjct: 425 AASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLV 483
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
W AMM GY Q + LK+F L + + T TV C L +N+G+Q+H
Sbjct: 484 AWNAMMAGYTQSHDGHKTLKLF-ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAY 542
Query: 356 ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK 415
K+ + +V S +++MY KCG++ A+ FD + D ++W MI+ +G +
Sbjct: 543 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDS--IPVPDDVAWTTMISGCIENGEEE 600
Query: 416 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY--A 473
A ++F++M+ +G ++ T L A S +E+G Q LK + D +
Sbjct: 601 RAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALK---LNCTNDPFVGT 657
Query: 474 CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKI--LKIE 531
LVD+ + G + +A+ + + + + ++++ W +L G HG + K++ L I+
Sbjct: 658 SLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIK 716
Query: 532 PENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQ 569
P+ +LS S + ++R D G+K +
Sbjct: 717 PDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 190/421 (45%), Gaps = 33/421 (7%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQT-----EKALDLFRRMPER 168
L++ Y K + A R+F +MP+R++ SWN+++ YA++ + ++A LFR + +
Sbjct: 80 LISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD 139
Query: 169 NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK---SWTTMVDGLAIN-----GRVDDA 220
V + + + + W K V G +N G+V +
Sbjct: 140 VVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEG 199
Query: 221 RELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNTLVTGFIQNGDL 279
+ LF+ MP R+VV WN+M+K Y + +EA++L + P+ TL +GD
Sbjct: 200 KVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDD 259
Query: 280 NRAEKLFH------EMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
+ A ++ +I ++ Y+ G LK F + + ++ + TF
Sbjct: 260 SDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADM-VESDVECDQVTF 318
Query: 334 VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLL 393
+ +L + L GQQ+H + K V ++LINMY K + AR +FD +
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDN--M 376
Query: 394 RQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGL 453
+RDLISWN +IA A +G EA+ LF ++ G + + T +L A S + EGL
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGL 433
Query: 454 QYFDKLLKNRSIQVR--EDHY--ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLA 509
K + +I++ D + L+D R +KEA + E D L W ++A
Sbjct: 434 S-LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFD--LVAWNAMMA 490
Query: 510 G 510
G
Sbjct: 491 G 491
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 122/499 (24%), Positives = 194/499 (38%), Gaps = 123/499 (24%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMING----------------------- 85
N+ I+ C+ + AR +FD M ERDL W ++I G
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 86 ---YIMCGVIKEARKLFDGPDAMK-------------DVVTWTALVNGYVKLNQIEEAER 129
Y M V+K A L +G K D TAL++ Y + ++EAE
Sbjct: 414 PDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEI 473
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVS----------------- 172
LF E ++ +WN M+ GY ++ K L LF M ++ S
Sbjct: 474 LF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 173 --------------------W--NTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDG 210
W + I+ +CG + AQ+ F+ + D +WTTM+ G
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISG 592
Query: 211 LAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM--------PERD 262
NG + A +F +M + V+ I AK ALE ++ D
Sbjct: 593 CIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTND 652
Query: 263 MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
+LV + + G ++ A LF + N+ W AM+ G QHG +E L++F ++++
Sbjct: 653 PFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKS 712
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+KP+ TF+ VL ACS S V A +M S G+
Sbjct: 713 -LGIKPDKVTFIGVLSACS---------------------HSGLVSEAYKHMRSMHGDYG 750
Query: 383 IARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTA 442
I + ++ ++ + A G K+A NL ++ + +A+ Y LL A
Sbjct: 751 I-----------KPEIEHYSCLADALGRAGLVKQAENL---IESMSMEASASMYRTLLAA 796
Query: 443 CSHAGLVEEGLQYFDKLLK 461
C G E G + KLL+
Sbjct: 797 CRVQGDTETGKRVATKLLE 815
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 149/318 (46%), Gaps = 31/318 (9%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM- 165
D+ + +++ YVK + A+ F +P + +W TMI G NG+ E+A +F +M
Sbjct: 551 DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR 610
Query: 166 -----PERNVVSWNTIIKALSECGRIEDA-QWHFNQMR---ERDVKSWTTMVDGLAINGR 216
P+ ++ T+ KA S +E Q H N ++ D T++VD A G
Sbjct: 611 LMGVLPDEFTIA--TLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGS 668
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTG 272
+DDA LF R+ + N+ +WN M+ G A++ E L+LF++M + D ++ +++
Sbjct: 669 IDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSA 728
Query: 273 FIQNGDLNRAEKLFHEMP-----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
+G ++ A K M + + ++ + + GL ++A + + +++
Sbjct: 729 CSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESM----SME 784
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIH-QLISKTAFQESTYVVSALINMY---SKCGELHI 383
+ + T+L AC G+++ +L+ S YV+ L NMY SK E+ +
Sbjct: 785 ASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVL--LSNMYAAASKWDEMKL 842
Query: 384 ARRIFDEGLLRQRDLISW 401
AR + +++ SW
Sbjct: 843 ARTMMKGHKVKKDPGFSW 860
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 104/212 (49%), Gaps = 14/212 (6%)
Query: 229 VRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHE 288
+RN ++ + ++ G + R+ FE PER + N L++ + + G L A ++F +
Sbjct: 46 LRNAITSSDLMLGKCTHARI----LTFEENPERFLI--NNLISMYSKCGSLTYARRVFDK 99
Query: 289 MPQKNVITWTAMMTGYVQHGLS-----EEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
MP +++++W +++ Y Q ++A +F L+ D + + T +L C
Sbjct: 100 MPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQD-VVYTSRMTLSPMLKLCLHS 158
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNG 403
+ + H K +V AL+N+Y K G++ + +F+E + RD++ WN
Sbjct: 159 GYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEE--MPYRDVVLWNL 216
Query: 404 MIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
M+ AY G+ +EAI+L + G N++T
Sbjct: 217 MLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 7/89 (7%)
Query: 366 YVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG-----KEAINL 420
++++ LI+MYSKCG L ARR+FD+ + RDL+SWN ++AAYA ++A L
Sbjct: 75 FLINNLISMYSKCGSLTYARRVFDK--MPDRDLVSWNSILAAYAQSSECVVENIQQAFLL 132
Query: 421 FNKMQELGFQANDVTYVELLTACSHAGLV 449
F +++ + +T +L C H+G V
Sbjct: 133 FRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 189/645 (29%), Positives = 311/645 (48%), Gaps = 91/645 (14%)
Query: 47 DCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG----- 101
D N+ + L G + AR++FD+MP D+ W ++I Y+ EA LF
Sbjct: 42 DPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVD 101
Query: 102 ----PDA-------------------------------MKDVVTWTALVNGYVKLNQIEE 126
PD + V ++L++ Y ++ +I++
Sbjct: 102 HAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDK 161
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSECGR 185
+ R+F EMP RN +W +I G G+ ++ L F M +S T AL C
Sbjct: 162 SCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAG 221
Query: 186 IEDAQWHFNQMRERDVKSWTT---MVDGLAI----NGRVDDARELFDRMPVRNVVSWNVM 238
+ ++ V+ + T + + LA G + D LF+ M R+VVSW +
Sbjct: 222 LRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSL 281
Query: 239 IKGYAKNRRLDEALELFERMPERDMPS-------------------W------------- 266
I Y + + +A+E F +M +P W
Sbjct: 282 IVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGL 341
Query: 267 -------NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
N+++ + G+L A LF M +++I+W+ ++ GY Q G EE K F+
Sbjct: 342 NDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSW 401
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
++ KP ++L ++A + G+Q+H L ++++ V S+LINMYSKCG
Sbjct: 402 MR-QSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCG 460
Query: 380 ELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
+ A IF E + D++S MI YA HG KEAI+LF K ++GF+ + VT++ +
Sbjct: 461 SIKEASMIFGE--TDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISV 518
Query: 440 LTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDL 499
LTAC+H+G ++ G YF+ + + +++ ++HY C+VDL RAGRL +A +I +
Sbjct: 519 LTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKK 578
Query: 500 SLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRM 559
VW LL C G+ + G+ A++IL+++P A L+N+Y+S G +EAANVR
Sbjct: 579 DDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRK 638
Query: 560 KMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDL 604
MK KG+ K+PG S +++ + V FV GD+ H QSE + Y +L+L
Sbjct: 639 NMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDI-YNILEL 682
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 248/530 (46%), Gaps = 31/530 (5%)
Query: 34 MSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIK 93
M +S + + + C TSIS L + + R M + D + + + I G ++
Sbjct: 1 MISSVRNCGTIQRFCTTSISLLQKPVEENIVRISNQVMVKFDPN---SHLRSLINAGNLR 57
Query: 94 EARKLFDG-PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM--------PERNVRSWNT 144
AR++FD P D+V+WT+++ YV N +EA LF M P+ +V S
Sbjct: 58 AARQVFDKMPHG--DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVL 115
Query: 145 MIDGYARNGQTEKALDLFRRMPE--RNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK 202
G + N ++L + +V ++++ G+I+ + F++M R+
Sbjct: 116 KACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAV 175
Query: 203 SWTTMVDGLAINGRVDDARELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERM 258
+WT ++ GL GR + F M + + ++ + +K A R++ + +
Sbjct: 176 TWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHV 235
Query: 259 PERDMPSW----NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
R + N+L T + + G++ LF M +++V++WT+++ Y + G +A+
Sbjct: 236 IVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAV 295
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
+ F K++ + + PN TF ++ AC+ L+ L G+Q+H + +S V ++++ M
Sbjct: 296 ETFIKMR-NSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKM 354
Query: 375 YSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
YS CG L A +F +R RD+ISW+ +I Y G+G+E F+ M++ G + D
Sbjct: 355 YSTCGNLVSASVLFQG--MRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDF 412
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEG 494
LL+ + ++E G Q L ++ + L+++ + G +KEA I
Sbjct: 413 ALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 495 LGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKI--EPENAGTYSLLS 542
D +S+ ++ G HG + + +K LK+ P++ S+L+
Sbjct: 472 TDRDDIVSL-TAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLT 520
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 148/375 (39%), Positives = 232/375 (61%), Gaps = 2/375 (0%)
Query: 236 NVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI 295
+I YAK L A +F+ M +RD+P WN ++TG+ + GD+ A +LF MP+KNV
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
+WT +++G+ Q+G EALK+F ++ D ++KPN T V+VL AC++L L G+++
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 356 ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK 415
+ F ++ YV +A I MYSKCG + +A+R+F+E L QR+L SWN MI + A HG
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEE-LGNQRNLCSWNSMIGSLATHGKHD 299
Query: 416 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACL 475
EA+ LF +M G + + VT+V LL AC H G+V +G + F + + I + +HY C+
Sbjct: 300 EALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCM 359
Query: 476 VDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENA 535
+DL GR G+L+EA+++I+ + + VWG LL C+ HGN +I ++ ++ + K+EP N
Sbjct: 360 IDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNP 419
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSW-VEVGNTVQVFVVGDKSHSQS 594
G ++SN+YA+ KW +R MK + + K G S+ VEVG V F V DKSH +S
Sbjct: 420 GNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRS 479
Query: 595 ELLGYLLLDLHTKMK 609
+ +L ++ +MK
Sbjct: 480 YEIYQVLEEIFRRMK 494
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/357 (27%), Positives = 170/357 (47%), Gaps = 39/357 (10%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
E D T+I Y G + AR++FD + +DV W A++ GY + ++ A LF
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFD-EMSKRDVPVWNAMITGYQRRGDMKAAMELFD 172
Query: 133 EMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN--TIIKALSEC---GRIE 187
MP +NV SW T+I G+++NG +AL +F M + V N T++ L C G +E
Sbjct: 173 SMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELE 232
Query: 188 DAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMP-VRNVVSWNVMIKGY 242
+ RE ++ ++ + G +D A+ LF+ + RN+ SWN MI
Sbjct: 233 IGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSL 292
Query: 243 AKNRRLDEALELFERM----PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT-- 296
A + + DEAL LF +M + D ++ L+ + G + + ++LF M + + I+
Sbjct: 293 ATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPK 352
Query: 297 ---WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
+ M+ + G +EA + + +KP+ + T+LGACS + +I
Sbjct: 353 LEHYGCMIDLLGRVGKLQEAYDLIKTM----PMKPDAVVWGTLLGACS----FHGNVEIA 404
Query: 354 QLISKTAFQ-ESTYVVSALI--NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAA 407
++ S+ F+ E T + +I N+Y+ A +D G+LR R L+ M A
Sbjct: 405 EIASEALFKLEPTNPGNCVIMSNIYA-------ANEKWD-GVLRMRKLMKKETMTKA 453
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 135/286 (47%), Gaps = 21/286 (7%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKD 107
C T I+ + G + AR++FD M +RD+ +W MI GY G +K A +LFD K+
Sbjct: 120 CTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSM-PRKN 178
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEM-PERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
V +WT +++G+ + EA ++F M +++V+ + + L++ RR+
Sbjct: 179 VTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLE 238
Query: 167 ER--------NVVSWNTIIKALSECGRIEDAQWHFNQM-RERDVKSWTTMVDGLAINGRV 217
N+ N I+ S+CG I+ A+ F ++ +R++ SW +M+ LA +G+
Sbjct: 239 GYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKH 298
Query: 218 DDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPE-----RDMPSWNT 268
D+A LF +M + V++ ++ + + ELF+ M E + +
Sbjct: 299 DEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGC 358
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQK-NVITWTAMMTGYVQHGLSEEA 313
++ + G L A L MP K + + W ++ HG E A
Sbjct: 359 MIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIA 404
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 124/296 (41%), Gaps = 41/296 (13%)
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
+L A KLF + ++ Y H E++ ++N L D L+P+ TF +
Sbjct: 31 NLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQPHESIVLYNLLSFD-GLRPSHHTFNFIF 89
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRD 397
A + + + +H ++ F+ ++ + LI Y+K G L ARR+FDE + +RD
Sbjct: 90 AASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDE--MSKRD 147
Query: 398 LISWNGMIAAYAHHGYGKEAINLFNKM--------------------------------Q 425
+ WN MI Y G K A+ LF+ M +
Sbjct: 148 VPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEK 207
Query: 426 ELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC--LVDLCGRAG 483
+ + N +T V +L AC++ G +E G + +N ++ Y C +++ + G
Sbjct: 208 DKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFF---DNIYVCNATIEMYSKCG 264
Query: 484 RLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKIEPENAGTY 538
+ A + E LG +L W ++ HG D L A+ + + E +A T+
Sbjct: 265 MIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTF 320
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 180/659 (27%), Positives = 324/659 (49%), Gaps = 99/659 (15%)
Query: 30 FLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMC 89
+R + S+ +H+++ + S D RK+FD M +++ W T+I+ Y+
Sbjct: 133 LIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKT 192
Query: 90 GVIKEARKLFD----------------------------------------GPDAMKDVV 109
G EA + F G + +KD+
Sbjct: 193 GRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLF 252
Query: 110 TWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLF------- 162
++ ++ Y +L IE + R+F ERN+ WNTMI Y +N ++++LF
Sbjct: 253 VVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSK 312
Query: 163 ---------------------------------RRMPERNVVSWNTIIKALSECGRIEDA 189
+ E +V N+++ S CG + +
Sbjct: 313 EIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKS 372
Query: 190 QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYA-- 243
F MRERDV SW TM+ NG D+ L M + + ++ ++ +
Sbjct: 373 FGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNL 432
Query: 244 KNRRLDEALELF---ERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHE--MPQKNVITWT 298
+N+ + + F + + M S+ L+ + ++G + ++KLF +++ TW
Sbjct: 433 RNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQKLFEGSGYAERDQATWN 490
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
+M++GY Q+G +E+ +F K+ + ++PN T ++L ACS + ++ G+Q+H +
Sbjct: 491 SMISGYTQNGHTEKTFLVFRKM-LEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIR 549
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAI 418
++ +V SAL++MYSK G + A +F + ++R+ +++ MI Y HG G+ AI
Sbjct: 550 QYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ--TKERNSVTYTTMILGYGQHGMGERAI 607
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL 478
+LF MQE G + + +T+V +L+ACS++GL++EGL+ F+++ + +IQ +HY C+ D+
Sbjct: 608 SLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDM 667
Query: 479 CGRAGRLKEAFNIIEGLGVDLSLS-VWGPLLAGCNVHGNADIGKLVAKKILKIEPEN--A 535
GR GR+ EA+ ++GLG + +++ +WG LL C +HG ++ + V++++ K + +
Sbjct: 668 LGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFS 727
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQS 594
G LLSNMYA KWK VR M++KGLKK+ G S +E+ V FV D+ H S
Sbjct: 728 GYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHS 786
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 159/666 (23%), Positives = 284/666 (42%), Gaps = 145/666 (21%)
Query: 37 STSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEAR 96
S +L + +S++CQ+G AR+LFD +P+ LW T+I G+I + EA
Sbjct: 31 SPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEAL 90
Query: 97 KLFD-----GPDAMKDVVTWT-----------------------------------ALVN 116
+ P D T++ +L+N
Sbjct: 91 LFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMN 150
Query: 117 GYVK-LN-----QIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV 170
YV LN + + ++F M +NV +WNT+I Y + G+ +A F M V
Sbjct: 151 MYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEV 210
Query: 171 ----VSWNTIIKALSECGRIEDAQWHFNQMRE------RDVKSWTTMVDGLAINGRVDDA 220
VS+ + A+S I+ A + M + +D+ ++ + A G ++ +
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 221 RELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELF-ERMPERDMPS-------------- 265
R +FD RN+ WN MI Y +N L E++ELF E + +++ S
Sbjct: 271 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSA 330
Query: 266 -------------------------WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAM 300
N+L+ + + G ++++ +F M +++V++W M
Sbjct: 331 LQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTM 390
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
++ +VQ+GL +E L + ++Q K + T +L A S+L G+Q H + +
Sbjct: 391 ISAFVQNGLDDEGLMLVYEMQ-KQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 361 FQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINL 420
Q + S LI+MYSK G + I++++F+ +RD +WN MI+ Y +G+ ++ +
Sbjct: 450 IQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLV 508
Query: 421 FNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH----YACLV 476
F KM E + N VT +L ACS G V+ G Q L SI+ D + LV
Sbjct: 509 FRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQ-----LHGFSIRQYLDQNVFVASALV 563
Query: 477 DLCGRAGRLKEAFNIIE--------------------GLG---VDLSLSV---------- 503
D+ +AG +K A ++ G+G + L LS+
Sbjct: 564 DMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAI 623
Query: 504 -WGPLLAGCNVHGNADIGKLV---AKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRM 559
+ +L+ C+ G D G + +++ I+P ++ Y +++M VG+ EA
Sbjct: 624 TFVAVLSACSYSGLIDEGLKIFEEMREVYNIQP-SSEHYCCITDMLGRVGRVNEAYEFVK 682
Query: 560 KMKDKG 565
+ ++G
Sbjct: 683 GLGEEG 688
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 291 bits (746), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 152/464 (32%), Positives = 264/464 (56%), Gaps = 17/464 (3%)
Query: 143 NTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK 202
N I +A G E A +F P R++VSWN +I + G E A + + M VK
Sbjct: 195 NASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVK 254
Query: 203 ----SWTTMVDGLAINGRVDDARELFD-------RMPVRNVVSWNVMIKGYAKNRRLDEA 251
+ +V ++ G ++ +E ++ RM + V N ++ ++K + EA
Sbjct: 255 PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLV---NALMDMFSKCGDIHEA 311
Query: 252 LELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSE 311
+F+ + +R + SW T+++G+ + G L+ + KLF +M +K+V+ W AM+ G VQ +
Sbjct: 312 RRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQ 371
Query: 312 EALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
+AL +F ++Q + KP+ T + L ACS L L+ G IH+ I K + + + ++L
Sbjct: 372 DALALFQEMQTSNT-KPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSL 430
Query: 372 INMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
++MY+KCG + A +F ++ R+ +++ +I A HG AI+ FN+M + G
Sbjct: 431 VDMYAKCGNISEALSVFHG--IQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488
Query: 432 NDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNI 491
+++T++ LL+AC H G+++ G YF ++ ++ + HY+ +VDL GRAG L+EA +
Sbjct: 489 DEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL 548
Query: 492 IEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKW 551
+E + ++ +VWG LL GC +HGN ++G+ AKK+L+++P ++G Y LL MY W
Sbjct: 549 MESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMW 608
Query: 552 KEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
++A R M ++G++K PGCS +EV V F+V DKS +SE
Sbjct: 609 EDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESE 652
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 179/384 (46%), Gaps = 51/384 (13%)
Query: 77 HLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE 136
H+ I+ + CG ++ ARK+FD ++D+V+W L+NGY K+ + E+A ++ M
Sbjct: 192 HVHNASIHMFASCGDMENARKVFD-ESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMES 250
Query: 137 RNVRSWNTMIDGYARN----GQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIED 188
V+ + + G + G + + + + E + N ++ S+CG I +
Sbjct: 251 EGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHE 310
Query: 189 AQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRL 248
A+ F+ + +R + SWTTM+ G A G +D +R+LFD M ++VV WN MI G + +R
Sbjct: 311 ARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRG 370
Query: 249 DEALELFERM------PER----------------DMPSW-----------------NTL 269
+AL LF+ M P+ D+ W +L
Sbjct: 371 QDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSL 430
Query: 270 VTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
V + + G+++ A +FH + +N +T+TA++ G HG + A+ FN++ D + P+
Sbjct: 431 VDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEM-IDAGIAPD 489
Query: 330 TGTFVTVLGACSDLAGLNEGQQ-IHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
TF+ +L AC + G+ Q+ S+ S ++++ + G L A R+
Sbjct: 490 EITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549
Query: 389 DEGLLRQRDLISWNGMIAAYAHHG 412
E + + D W ++ HG
Sbjct: 550 -ESMPMEADAAVWGALLFGCRMHG 572
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 140/279 (50%), Gaps = 33/279 (11%)
Query: 243 AKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMT 302
+++R LD ++++ + + ++ SWN + GF ++ E P+++ + + M+
Sbjct: 98 SESRYLDYSVKILKGIENPNIFSWNVTIRGFSES-----------ENPKESFLLYKQML- 145
Query: 303 GYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQ 362
+HG E +P+ T+ + C+DL + G I + K +
Sbjct: 146 ---RHGCCES--------------RPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLE 188
Query: 363 ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
++V +A I+M++ CG++ AR++FDE + RDL+SWN +I Y G ++AI ++
Sbjct: 189 LVSHVHNASIHMFASCGDMENARKVFDESPV--RDLVSWNCLINGYKKIGEAEKAIYVYK 246
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRA 482
M+ G + +DVT + L+++CS G + G ++++ +K +++ L+D+ +
Sbjct: 247 LMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE-YVKENGLRMTIPLVNALMDMFSKC 305
Query: 483 GRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGK 521
G + EA I + L +S W +++G G D+ +
Sbjct: 306 GDIHEARRIFDNLEKRTIVS-WTTMISGYARCGLLDVSR 343
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 129/286 (45%), Gaps = 34/286 (11%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMING----YIMCGVIKEARKLFDGPDAMKD 107
+S G ++ ++ ++ + E L + ++N + CG I EAR++FD + +
Sbjct: 264 VSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK-RT 322
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
+V+WT +++GY + ++ + +LF +M E++V WN MI G + + + AL LF+ M
Sbjct: 323 IVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 168 RNVVSWN-TIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDR 226
N T+I LS C +Q+ DV W R +
Sbjct: 383 SNTKPDEITMIHCLSAC----------SQLGALDVGIWIH--------------RYIEKY 418
Query: 227 MPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLF 286
NV ++ YAK + EAL +F + R+ ++ ++ G +GD + A F
Sbjct: 419 SLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYF 478
Query: 287 HEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
+EM + IT+ +++ G+ + F+++++ L P
Sbjct: 479 NEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNP 524
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 291 bits (745), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 198/659 (30%), Positives = 337/659 (51%), Gaps = 110/659 (16%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIK-----EARKLFDGPDAMK 106
+S + G + ARK+F++M R+ +NG +M G+++ EA KLF ++M
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRN----AVTLNG-LMVGLVRQKWGEEATKLFMDMNSMI 304
Query: 107 DVVTWT-------------------------------------------ALVNGYVKLNQ 123
DV + LVN Y K
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 124 IEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSE 182
I +A R+FY M +++ SWN+MI G +NG +A++ ++ M +++ + T+I +LS
Sbjct: 365 IADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSS 424
Query: 183 CGRIEDA----QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSW 235
C ++ A Q H ++ + +V ++ A G +++ R++F MP + VSW
Sbjct: 425 CASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSW 484
Query: 236 NVMIKGYAKNRR-LDEALELF---ERMPER------------------------------ 261
N +I A++ R L EA+ F +R ++
Sbjct: 485 NSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLAL 544
Query: 262 ------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ-KNVITWTAMMTGYVQHGLSEEAL 314
+ + N L+ + + G+++ EK+F M + ++ +TW +M++GY+ + L +AL
Sbjct: 545 KNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKAL 604
Query: 315 K-IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALIN 373
++ LQ L ++ + TVL A + +A L G ++H + + V SAL++
Sbjct: 605 DLVWFMLQTGQRL--DSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVD 662
Query: 374 MYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
MYSKCG L A R F+ + R+ SWN MI+ YA HG G+EA+ LF M+ G D
Sbjct: 663 MYSKCGRLDYALRFFNT--MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPD 720
Query: 434 -VTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII 492
VT+V +L+ACSHAGL+EEG ++F+ + + + R +H++C+ D+ GRAG L + + I
Sbjct: 721 HVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFI 780
Query: 493 EGLGVDLSLSVWGPLL-AGCNVHG-NADIGKLVAKKILKIEPENAGTYSLLSNMYASVGK 550
E + + ++ +W +L A C +G A++GK A+ + ++EPENA Y LL NMYA+ G+
Sbjct: 781 EKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGR 840
Query: 551 WKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
W++ R KMKD +KK+ G SWV + + V +FV GDKSH ++++ L +L+ KM+
Sbjct: 841 WEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMR 899
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/448 (24%), Positives = 187/448 (41%), Gaps = 63/448 (14%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
KDV L+N Y++ A ++F EMP RN SW ++ GY+RNG+ ++AL R M
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDM 93
Query: 166 PERNVVS-WNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAIN---------- 214
+ + S + L C I F + + + VD + N
Sbjct: 94 VKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCI 153
Query: 215 GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM---------------- 258
G V A F + V+N VSWN +I Y++ A +F M
Sbjct: 154 GSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLV 213
Query: 259 --------PE-----------------RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKN 293
P+ D+ + LV+ F ++G L+ A K+F++M +N
Sbjct: 214 TTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRN 273
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLA-----GLNE 348
+T +M G V+ EEA K+F + + + P ++V +L + + + GL +
Sbjct: 274 AVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKK 331
Query: 349 GQQIHQLISKTAFQESTY-VVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAA 407
G+++H + T + + + L+NMY+KCG + ARR+F + +D +SWN MI
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFY--FMTDKDSVSWNSMITG 389
Query: 408 YAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQV 467
+G EA+ + M+ T + L++C+ + G Q + LK I +
Sbjct: 390 LDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK-LGIDL 448
Query: 468 REDHYACLVDLCGRAGRLKEAFNIIEGL 495
L+ L G L E I +
Sbjct: 449 NVSVSNALMTLYAETGYLNECRKIFSSM 476
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 118/211 (55%), Gaps = 10/211 (4%)
Query: 254 LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEA 313
L++ ++D+ N L+ +++ GD A K+F EMP +N ++W +++GY ++G +EA
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEA 86
Query: 314 LKIFNKLQADHALKPNTGTFVTVLGACSDLA--GLNEGQQIHQLISKTAFQESTYVVSAL 371
L +F + + N FV+VL AC ++ G+ G+QIH L+ K ++ V + L
Sbjct: 87 L-VFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVL 145
Query: 372 INMYSKC-GELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
I+MY KC G + A F G + ++ +SWN +I+ Y+ G + A +F+ MQ G +
Sbjct: 146 ISMYWKCIGSVGYALCAF--GDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 431 ANDVTYVELL-TACSHAGLVEEGLQYFDKLL 460
+ T+ L+ TACS L E ++ ++++
Sbjct: 204 PTEYTFGSLVTTACS---LTEPDVRLLEQIM 231
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 352 IHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHH 411
H + K + Y+ + LIN Y + G+ AR++FDE L R+ +SW +++ Y+ +
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL--RNCVSWACIVSGYSRN 80
Query: 412 GYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLV 449
G KEA+ M + G +N +V +L AC G V
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 197/674 (29%), Positives = 326/674 (48%), Gaps = 109/674 (16%)
Query: 32 RTMSTSTSSLHS-AMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCG 90
+ S + SS+ S ++ N ++ + G + DA +F +M ER+L W ++ GY G
Sbjct: 115 KVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQG 174
Query: 91 VIKEA-----RKLFDG-------------------PDAMK---------------DVVTW 111
EA R L+ G PD + D+
Sbjct: 175 YFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV 234
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV- 170
AL+ YVK ++ A LF MP R++ SWN MI GY NG + L+LF M +V
Sbjct: 235 NALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD 294
Query: 171 VSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAIN--------------GR 216
T+ +S C + D + RD+ ++ + G A++ G
Sbjct: 295 PDLMTLTSVISACELLGDRRLG------RDIHAYV-ITTGFAVDISVCNSLTQMYLNAGS 347
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERD-------------- 262
+A +LF RM +++VSW MI GY N D+A++ + RM ++D
Sbjct: 348 WREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTY-RMMDQDSVKPDEITVAAVLS 406
Query: 263 ----------------------MPSW----NTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
+ S+ N L+ + + +++A +FH +P+KNVI+
Sbjct: 407 ACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVIS 466
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
WT+++ G + EAL +++ L+PN T L AC+ + L G++IH +
Sbjct: 467 WTSIIAGLRLNNRCFEALIFLRQMKM--TLQPNAITLTAALAACARIGALMCGKEIHAHV 524
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
+T ++ +AL++MY +CG ++ A F+ +++D+ SWN ++ Y+ G G
Sbjct: 525 LRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS---QKKDVTSWNILLTGYSERGQGSM 581
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
+ LF++M + + +++T++ LL CS + +V +GL YF K+ ++ + HYAC+V
Sbjct: 582 VVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVV 640
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAG 536
DL GRAG L+EA I+ + V +VWG LL C +H D+G+L A+ I +++ ++ G
Sbjct: 641 DLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVG 700
Query: 537 TYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSEL 596
Y LL N+YA GKW+E A VR MK+ GL GCSWVEV V F+ DK H Q++
Sbjct: 701 YYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKE 760
Query: 597 LGYLLLDLHTKMKK 610
+ +L + KM +
Sbjct: 761 INTVLEGFYEKMSE 774
Score = 166 bits (420), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 145/547 (26%), Positives = 257/547 (46%), Gaps = 70/547 (12%)
Query: 55 LCQEGRIDDARKLFDRMPERDLHLWGTMINGYI-MCG---VIKEARKLFD-GPDAMKD-- 107
LC G++++A KL + M E + + + + +C +E K++ +M
Sbjct: 69 LCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLG 128
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM-- 165
V A + +V+ + +A +F +M ERN+ SWN ++ GYA+ G ++A+ L+ RM
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 166 ---PERNVVSWNTIIKALSECGRIED----AQWHFNQMR---ERDVKSWTTMVDGLAING 215
+ +V ++ +++ CG I D + H + +R E D+ ++ G
Sbjct: 189 VGGVKPDVYTFPCVLRT---CGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELF-------------------- 255
V AR LFDRMP R+++SWN MI GY +N E LELF
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 256 ------ERMPERDMPSW-------------NTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
+R RD+ ++ N+L ++ G AEKLF M +K++++
Sbjct: 306 ACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVS 365
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
WT M++GY + L ++A+ + + D ++KP+ T VL AC+ L L+ G ++H+L
Sbjct: 366 WTTMISGYEYNFLPDKAIDTYRMMDQD-SVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
K V + LINMYSKC + A IF + ++++ISW +IA + E
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHN--IPRKNVISWTSIIAGLRLNNRCFE 482
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
A+ +F + ++ Q N +T L AC+ G + G + +L+ + + + L+
Sbjct: 483 AL-IFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT-GVGLDDFLPNALL 540
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPEN 534
D+ R GR+ A++ D ++ W LL G + G + + +++K + P+
Sbjct: 541 DMYVRCGRMNTAWSQFNSQKKD--VTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDE 598
Query: 535 AGTYSLL 541
SLL
Sbjct: 599 ITFISLL 605
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 166/364 (45%), Gaps = 79/364 (21%)
Query: 210 GLAINGRVDDARELFDRM-PVRNVVSWNV---MIKGYAKNRRLDEALELFE----RMPER 261
GL NG++++A +L + M +R V +V +++ R +E +++ M
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
+ N + F++ G+L A +F +M ++N+ +W ++ GY + G +EA+ +++++
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
+KP+ TF VL C + L G+++H + + ++ VV+ALI MY KCG++
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
AR +FD + +RD+ISWN MI+ Y +G E + LF M+ L + +T +++
Sbjct: 248 KSARLLFDR--MPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSL 501
AC +LL +R R GR A+ I G VD+S+
Sbjct: 306 AC--------------ELLGDR-----------------RLGRDIHAYVITTGFAVDISV 334
Query: 502 SVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANV--RM 559
CN L+ MY + G W+EA + RM
Sbjct: 335 ---------CNS---------------------------LTQMYLNAGSWREAEKLFSRM 358
Query: 560 KMKD 563
+ KD
Sbjct: 359 ERKD 362
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 292/544 (53%), Gaps = 58/544 (10%)
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER--- 168
T L+ Y + +EEA LF EMP+R+V +W MI GYA + +A + F M ++
Sbjct: 49 TNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTS 108
Query: 169 -NVVSWNTIIKAL-----------------------------------SECG-RIEDAQW 191
N + ++++K+ + C +E A
Sbjct: 109 PNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACL 168
Query: 192 HFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRN--VVSWNVMIKGYAKNRRLD 249
F ++ ++ +WTT++ G G +++ +M + N V + + I A + +D
Sbjct: 169 IFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRA-SASID 227
Query: 250 EAL-------ELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMT 302
+ +R + ++P N+++ + + G L+ A+ FHEM K++ITW +++
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 303 GYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQ 362
++ S EAL +F + ++ PN TF +++ AC+++A LN GQQ+H I + F
Sbjct: 288 E-LERSDSSEALLMFQRFES-QGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 363 ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
++ + +ALI+MY+KCG + ++R+F E ++ +R+L+SW M+ Y HGYG EA+ LF+
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGE-IVDRRNLVSWTSMMIGYGSHGYGAEAVELFD 404
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRA 482
KM G + + + ++ +L+AC HAGLVE+GL+YF+ + I D Y C+VDL GRA
Sbjct: 405 KMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRA 464
Query: 483 GRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG-NADIGKLVAKKILKIEPENAGTYSLL 541
G++ EA+ ++E + S WG +L C H N I +L A+K+++++P+ GTY +L
Sbjct: 465 GKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVML 524
Query: 542 SNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDK----SHSQSELL 597
S +YA+ GKW + A VR M+ G KK+ G SW+ V N V F V DK + S +L
Sbjct: 525 SYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVL 584
Query: 598 GYLL 601
G L+
Sbjct: 585 GLLI 588
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 192/445 (43%), Gaps = 95/445 (21%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-------DGPDAMK--- 106
++G +++AR LFD MP+RD+ W MI GY A + F P+
Sbjct: 57 EKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSS 116
Query: 107 --------DVVTWTALVNG-YVKLN--------------------QIEEAERLFYEMPER 137
V+ + ALV+G VKL +E A +F ++ +
Sbjct: 117 VLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVK 176
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRM--------P----------------------- 166
N +W T+I G+ G L ++++M P
Sbjct: 177 NDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIH 236
Query: 167 --------ERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVD 218
+ N+ N+I+ CG + +A+ +F++M ++D+ +W T++ L R D
Sbjct: 237 ASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELE---RSD 293
Query: 219 DAREL--FDRMP----VRNVVSWNVMIKGYAKNRRLDEALEL----FERMPERDMPSWNT 268
+ L F R V N ++ ++ A L+ +L F R +++ N
Sbjct: 294 SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANA 353
Query: 269 LVTGFIQNGDLNRAEKLFHEM-PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
L+ + + G++ ++++F E+ ++N+++WT+MM GY HG EA+++F+K+ + ++
Sbjct: 354 LIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS-GIR 412
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQLI-SKTAFQESTYVVSALINMYSKCGELHIARR 386
P+ F+ VL AC + +G + ++ S+ + + ++++ + G++ A
Sbjct: 413 PDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYE 472
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHH 411
+ E + + D +W ++ A H
Sbjct: 473 LV-ERMPFKPDESTWGAILGACKAH 496
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 104/235 (44%), Gaps = 59/235 (25%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMIN--------------------GYIM 88
N+ + C+ G + +A+ F M ++DL W T+I+ G++
Sbjct: 252 NSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVP 311
Query: 89 -------------------CGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAER 129
CG R G + K+V AL++ Y K I +++R
Sbjct: 312 NCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN--KNVELANALIDMYAKCGNIPDSQR 369
Query: 130 LFYEMPE-RNVRSWNTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSE 182
+F E+ + RN+ SW +M+ GY +G +A++LF +M P+R + + ++ A
Sbjct: 370 VFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDR--IVFMAVLSACRH 427
Query: 183 CGRIEDAQWHFNQMR-------ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR 230
G +E +FN M +RD+ + +VD L G++ +A EL +RMP +
Sbjct: 428 AGLVEKGLKYFNVMESEYGINPDRDI--YNCVVDLLGRAGKIGEAYELVERMPFK 480
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 196/645 (30%), Positives = 327/645 (50%), Gaps = 101/645 (15%)
Query: 24 IINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMP----------- 72
+I+ + R+++ S+S++ + T + C E ++ AR +FD +P
Sbjct: 20 VIHQHLLKRSLTLSSSTVLVNL----TRLYASCNE--VELARHVFDEIPHPRINPIAWDL 73
Query: 73 -----------ERDLHLWGTMING------YIMCGVIKEA---RKLFDG---------PD 103
E+ L L+ M+N Y V+K R + DG D
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 104 AMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFR 163
D+ TALV+ Y K ++E A ++F EMP+R++ +WN MI G++ + + LF
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 164 RMPERNVVSWN--TIIKALSECGRI----EDAQWHFNQMR---ERDVKSWTTMVDGLAIN 214
M + +S N TI+ GR E H R D+ T ++D A +
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKS 253
Query: 215 GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERD------------ 262
+ AR +FD +N V+W+ MI GY +N + EA E+F +M D
Sbjct: 254 KCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL 313
Query: 263 -----------------------------MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKN 293
+ NT+++ + + G L A + F E+ K+
Sbjct: 314 ILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKD 373
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
VI++ +++TG V + EE+ ++F++++ ++P+ T + VL ACS LA L G H
Sbjct: 374 VISYNSLITGCVVNCRPEESFRLFHEMRTS-GIRPDITTLLGVLTACSHLAALGHGSSCH 432
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGY 413
+ +T + +AL++MY+KCG+L +A+R+FD + +RD++SWN M+ + HG
Sbjct: 433 GYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDT--MHKRDIVSWNTMLFGFGIHGL 490
Query: 414 GKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLK-NRSIQVREDHY 472
GKEA++LFN MQE G ++VT + +L+ACSH+GLV+EG Q F+ + + + ++ R DHY
Sbjct: 491 GKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHY 550
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP 532
C+ DL RAG L EA++ + + + + V G LL+ C + NA++G V+KK+ +
Sbjct: 551 NCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSL-G 609
Query: 533 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEV 577
E + LLSN Y++ +W++AA +RM K +GL K PG SWV+V
Sbjct: 610 ETTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 96/187 (51%), Gaps = 11/187 (5%)
Query: 333 FVTVLGACSDLAGLNEGQQIHQ-LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
F+++L C L GQ IHQ L+ ++ S+ V+ L +Y+ C E+ +AR +FDE
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEE 451
+ + I+W+ MI AYA + + ++A++L+ KM G + TY +L AC+ +++
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 452 GLQYFDKLLKNR--SIQVREDHYAC--LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPL 507
G KL+ + D Y C LVD + G L+ A + + + + W +
Sbjct: 122 G-----KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAM 175
Query: 508 LAGCNVH 514
++G ++H
Sbjct: 176 ISGFSLH 182
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 166/528 (31%), Positives = 282/528 (53%), Gaps = 61/528 (11%)
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSECGRI----E 187
+V SWN++I AR+G + +AL F M P R+ S+ IKA S I +
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRS--SFPCAIKACSSLFDIFSGKQ 97
Query: 188 DAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRR 247
Q F + D+ + ++ + G+++DAR++FD +P RN+VSW MI+GY N
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 248 LDEALELFE----------------------------RMP-----------------ERD 262
+A+ LF+ R+P +R
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217
Query: 263 MPSWNTLVTGFIQNGD--LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKL 320
+ NTL+ + + G+ + A K+F ++ K+ +++ ++M+ Y Q G+S EA ++F +L
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRL 277
Query: 321 QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
+ + N T TVL A S L G+ IH + + ++ V +++I+MY KCG
Sbjct: 278 VKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGR 337
Query: 381 LHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
+ AR+ FD ++ +++ SW MIA Y HG+ +A+ LF M + G + N +T+V +L
Sbjct: 338 VETARKAFDR--MKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 441 TACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLS 500
ACSHAGL EG ++F+ + ++ +HY C+VDL GRAG L++A+++I+ + +
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 501 LSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMK 560
+W LLA C +H N ++ ++ ++ +++ N G Y LLS++YA G+WK+ VRM
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515
Query: 561 MKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKM 608
MK++GL K PG S +E+ V VF++GD+ H Q E + L +L+ K+
Sbjct: 516 MKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKL 563
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 167/372 (44%), Gaps = 91/372 (24%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF--------DGPDAM----- 105
G+++DARK+FD +P+R++ W +MI GY + G +A LF D DAM
Sbjct: 125 GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSM 184
Query: 106 -------------------------------KDVVTWTALVNGYVKLNQ--IEEAERLFY 132
+ V L++ Y K + + A ++F
Sbjct: 185 GLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFD 244
Query: 133 EMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-----TIIKALSECGRIE 187
++ +++ S+N+++ YA++G + +A ++FRR+ + VV++N T++ A+S G +
Sbjct: 245 QIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALR 304
Query: 188 DAQWHFNQM----RERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
+ +Q+ E DV T+++D GRV+ AR+ FDRM +NV SW MI GY
Sbjct: 305 IGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYG 364
Query: 244 KNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG 303
+ +ALELF M I +G + N IT+ +++
Sbjct: 365 MHGHAAKALELFPAM---------------IDSG------------VRPNYITFVSVLAA 397
Query: 304 YVQHGLSEEALKIFNKLQADHALKP---NTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
GL E + FN ++ ++P + G V +LG L Q+ + LI +
Sbjct: 398 CSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL------QKAYDLIQRMK 451
Query: 361 FQESTYVVSALI 372
+ + + S+L+
Sbjct: 452 MKPDSIIWSSLL 463
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG---PDAMKDV 108
I C+ GR++ ARK FDRM +++ W MI GY M G +A +LF +
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNY 388
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPER-----NVRSWNTMIDGYARNGQTEKALDLFR 163
+T+ +++ E R F M R + + M+D R G +KA DL +
Sbjct: 389 ITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 164 RMPER-NVVSWNTIIKALSECGRIEDAQWHFNQMRERD 200
RM + + + W++++ A +E A+ ++ E D
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELD 486
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 288/502 (57%), Gaps = 16/502 (3%)
Query: 80 GTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNV 139
G+ I ++ G I+ F P + ++ A V V L ++ +E + + + +V
Sbjct: 25 GSPIQALVLYGGIRRRGVYF--PGWVPLILRACACVVPRVVLGKLLHSESIKFGVCS-DV 81
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRE- 198
+++I Y + G A +F MPERNV +WN +I G A F ++
Sbjct: 82 MVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVC 141
Query: 199 RDVKSWTTMVDGLAINGRVDDARELFDRMP--VRNVVSWNVMIKGYAKNRRLDEALELFE 256
R+ +W M+ G ++ ARELF+RMP ++NV +W+VM+ Y NR++++A + FE
Sbjct: 142 RNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFE 201
Query: 257 RMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKI 316
+PE++ W+ +++G+ + GD++ A +F+ + ++++ W ++ GY Q+G S++A+
Sbjct: 202 DIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDA 261
Query: 317 FNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
F +Q + +P+ T ++L AC+ L+ G+++H LI+ + + +V +ALI+MY+
Sbjct: 262 FFNMQGE-GYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYA 320
Query: 377 KCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
KCG+L A +F+ + R + N MI+ A HG GKEA+ +F+ M+ L + +++T+
Sbjct: 321 KCGDLENATSVFES--ISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITF 378
Query: 437 VELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLG 496
+ +LTAC H G + EGL+ F + +K + ++ H+ CL+ L GR+G+LKEA+ +++ +
Sbjct: 379 IAVLTACVHGGFLMEGLKIFSE-MKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMH 437
Query: 497 VDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYS-----LLSNMYASVGKW 551
V + +V G LL C VH + ++ + V KI++ +YS +SN+YA +W
Sbjct: 438 VKPNDTVLGALLGACKVHMDTEMAEQVM-KIIETAGSITNSYSENHLASISNLYAHTERW 496
Query: 552 KEAANVRMKMKDKGLKKQPGCS 573
+ A +R++M+ +GL+K PG S
Sbjct: 497 QTAEALRVEMEKRGLEKSPGLS 518
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/358 (29%), Positives = 180/358 (50%), Gaps = 11/358 (3%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTW 111
IS + G + ARK+FD MPER++ W MI GY+ G A LF+ ++ VTW
Sbjct: 88 ISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTW 147
Query: 112 TALVNGYVKLNQIEEAERLFYEMP--ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERN 169
++ GY K +IE+A LF MP +NV++W+ M+ Y N + E A F +PE+N
Sbjct: 148 IEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKN 207
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPV 229
W+ ++ G + +A+ F ++ RD+ W T++ G A NG DDA + F M
Sbjct: 208 AFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQG 267
Query: 230 R----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMP----SWNTLVTGFIQNGDLNR 281
+ V+ + ++ A++ RLD E+ + R + N L+ + + GDL
Sbjct: 268 EGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLEN 327
Query: 282 AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACS 341
A +F + ++V +M++ HG +EAL++F+ +++ LKP+ TF+ VL AC
Sbjct: 328 ATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLD-LKPDEITFIAVLTACV 386
Query: 342 DLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
L EG +I + + + LI++ + G+L A R+ E ++ D +
Sbjct: 387 HGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTV 444
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 288 bits (738), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/467 (35%), Positives = 270/467 (57%), Gaps = 19/467 (4%)
Query: 124 IEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKA 179
++ A +LF E+P+ +V N ++ G A++ + EK + L+ M +R V ++ ++KA
Sbjct: 62 LKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKA 121
Query: 180 LSECG-RIEDAQWHFNQMRERDVKSW---TTMVDGLAINGRVDDARELFDRMPVRNVVSW 235
S+ R +H +R V + ++ A G + A ELFD + V+W
Sbjct: 122 CSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAW 181
Query: 236 NVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI 295
+ M GYAK ++DEA+ LF+ MP +D +WN ++TG ++ +++ A +LF +K+V+
Sbjct: 182 SSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV 241
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
TW AM++GYV G +EAL IF +++ D P+ T +++L AC+ L L G+++H
Sbjct: 242 TWNAMISGYVNCGYPKEALGIFKEMR-DAGEHPDVVTILSLLSACAVLGDLETGKRLHIY 300
Query: 356 ISKTAFQESTYVV-----SALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYA- 409
I +TA S+ V +ALI+MY+KCG + A +F ++ RDL +WN +I A
Sbjct: 301 ILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRG--VKDRDLSTWNTLIVGLAL 358
Query: 410 HHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRE 469
HH G +I +F +MQ L N+VT++ ++ ACSH+G V+EG +YF + +I+
Sbjct: 359 HHAEG--SIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNI 416
Query: 470 DHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK 529
HY C+VD+ GRAG+L+EAF +E + ++ + VW LL C ++GN ++GK +K+L
Sbjct: 417 KHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLLS 476
Query: 530 IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVE 576
+ + +G Y LLSN+YAS G+W VR D +KK G S +E
Sbjct: 477 MRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 175/368 (47%), Gaps = 63/368 (17%)
Query: 89 CGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDG 148
CG + A +LFD A V W+++ +GY K +I+EA RLF EMP ++ +WN MI G
Sbjct: 160 CGDLGIASELFD-DSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITG 218
Query: 149 YARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSW 204
+ + + A +LF R E++VV+WN +I CG ++A F +MR+ DV +
Sbjct: 219 CLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTI 278
Query: 205 TTMVDGLAINGRVDDARELFDRMPVRNVVS---------WNVMIKGYAKNRRLDEALELF 255
+++ A+ G ++ + L + VS WN +I YAK +D A+E+F
Sbjct: 279 LSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVF 338
Query: 256 ERMPERDMPSWNTLVTGFIQNGDLNRAE---KLFHEMPQ----KNVITWTAMMTGYVQHG 308
+ +RD+ +WNTL+ G L+ AE ++F EM + N +T+ ++ G
Sbjct: 339 RGVKDRDLSTWNTLIVGLA----LHHAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSG 394
Query: 309 LSEEALKIFNKLQADHALKPNT---GTFV-----------------------------TV 336
+E K F+ ++ + ++PN G V T+
Sbjct: 395 RVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTL 454
Query: 337 LGACSDLAGLNEGQQIHQ-LISKTAFQESTYVVSALINMYSKCGE---LHIARRIFDEGL 392
LGAC + G+ ++ L+S + YV+ L N+Y+ G+ + R++FD+
Sbjct: 455 LGACKIYGNVELGKYANEKLLSMRKDESGDYVL--LSNIYASTGQWDGVQKVRKMFDDTR 512
Query: 393 LRQRDLIS 400
+++ +S
Sbjct: 513 VKKPTGVS 520
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 199/451 (44%), Gaps = 74/451 (16%)
Query: 18 KTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLH 77
+ H + ++NG + +S ++SA L G + A KLFD +P+ D+
Sbjct: 30 QIHASMVVNG--LMSNLSVVGELIYSA---------SLSVPGALKYAHKLFDEIPKPDVS 78
Query: 78 LWGTMING--------------------------YIMCGVIKEARKL---FDGPDAMKDV 108
+ ++ G Y V+K KL +G V
Sbjct: 79 ICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKV 138
Query: 109 VTWTALVNGYVK---------LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKAL 159
V ++N YVK + A LF + + + +W++M GYA+ G+ ++A+
Sbjct: 139 VRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAM 198
Query: 160 DLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDG--------- 210
LF MP ++ V+WN +I +C ++ A+ F++ E+DV +W M+ G
Sbjct: 199 RLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKE 258
Query: 211 -LAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERD-----MP 264
L I + DA E D + + +++S ++ +RL + + E P
Sbjct: 259 ALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLH--IYILETASVSSSIYVGTP 316
Query: 265 SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
WN L+ + + G ++RA ++F + +++ TW ++ G H +E ++++F ++Q
Sbjct: 317 IWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQ--- 372
Query: 325 ALK--PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA-FQESTYVVSALINMYSKCGEL 381
LK PN TF+ V+ ACS ++EG++ L+ + + +++M + G+L
Sbjct: 373 RLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQL 432
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
A +F E + + + I W ++ A +G
Sbjct: 433 EEA-FMFVESMKIEPNAIVWRTLLGACKIYG 462
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 136/299 (45%), Gaps = 21/299 (7%)
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
G L A KLF E+P+ +V ++ G Q E+ + ++ +++ + P+ TF V
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEK-RGVSPDRYTFTFV 118
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR 396
L ACS L + G H + + F + YV +ALI ++ CG+L IA +FD+ +
Sbjct: 119 LKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHK 178
Query: 397 DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYF 456
++W+ M + YA G EA+ LF++M + V + ++T C ++ + F
Sbjct: 179 --VAWSSMTSGYAKRGKIDEAMRLFDEMP----YKDQVAWNVMITGCLKCKEMDSARELF 232
Query: 457 DKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNV 513
D+ + + + ++ G KEA I + + G + LL+ C V
Sbjct: 233 DRFTEKDVVT-----WNAMISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAV 287
Query: 514 HGNADIGKLVAKKILKIEPENAGTY------SLLSNMYASVGKWKEAANVRMKMKDKGL 566
G+ + GK + IL+ ++ Y + L +MYA G A V +KD+ L
Sbjct: 288 LGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDL 346
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 95/219 (43%), Gaps = 23/219 (10%)
Query: 30 FLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIM- 88
L T S S SS++ N I + G ID A ++F + +RDL W T+I G +
Sbjct: 301 ILETASVS-SSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH 359
Query: 89 -----CGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP-----ERN 138
+ +E ++L P+ VT+ ++ +++E + F M E N
Sbjct: 360 HAEGSIEMFEEMQRLKVWPNE----VTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPN 415
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMP-ERNVVSWNTIIKALSECGRIEDAQW---HFN 194
++ + M+D R GQ E+A M E N + W T++ A G +E ++
Sbjct: 416 IKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANEKLL 475
Query: 195 QMRERDVKSWTTMVDGLAINGR---VDDARELFDRMPVR 230
MR+ + + + + A G+ V R++FD V+
Sbjct: 476 SMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVK 514
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 287 bits (735), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 171/536 (31%), Positives = 278/536 (51%), Gaps = 49/536 (9%)
Query: 121 LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKAL-DLFRRMPERNVVSWNTIIKA 179
N + R F P V I NG+ ++AL ++ PE ++ ++ A
Sbjct: 2 FNLMRLIHRSFSSSPTNYVLQTILPISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNA 61
Query: 180 LSECGRIEDAQ-WHFNQMRERDVKSWTTMVDGLAINGRVD---DARELFDRMPVRNVVSW 235
+ + D Q H + ++ R + + L G+ D DAR++ D MP +NVVSW
Sbjct: 62 CLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSW 121
Query: 236 NVMIKGYAKNRRLDEALELFERMPERD------------------------------MPS 265
MI Y++ EAL +F M D +
Sbjct: 122 TAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVK 181
Query: 266 WN---------TLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKI 316
WN +L+ + + G + A ++F +P+++V++ TA++ GY Q GL EEAL++
Sbjct: 182 WNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 241
Query: 317 FNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
F++L ++ + PN T+ ++L A S LA L+ G+Q H + + + ++LI+MYS
Sbjct: 242 FHRLHSE-GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYS 300
Query: 377 KCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQ-ELGFQANDVT 435
KCG L ARR+FD + +R ISWN M+ Y+ HG G+E + LF M+ E + + VT
Sbjct: 301 KCGNLSYARRLFDN--MPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVT 358
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNR-SIQVREDHYACLVDLCGRAGRLKEAFNIIEG 494
+ +L+ CSH + + GL FD ++ + +HY C+VD+ GRAGR+ EAF I+
Sbjct: 359 LLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKR 418
Query: 495 LGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEA 554
+ + V G LL C VH + DIG+ V +++++IEPENAG Y +LSN+YAS G+W +
Sbjct: 419 MPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADV 478
Query: 555 ANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
NVR M K + K+PG SW++ T+ F D++H + E + + ++ KMK+
Sbjct: 479 NNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQ 534
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 167/354 (47%), Gaps = 77/354 (21%)
Query: 52 ISRLCQEGRIDDARKLFDRM-PERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVT 110
IS+LC GR+ +A + PE H + ++N + + R L DG ++
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACL------DKRALRDGQRVHAHMIK 80
Query: 111 W---------TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL 161
T L+ Y K + +E+A ++ EMPE+NV SW MI Y++ G + +AL +
Sbjct: 81 TRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTV 140
Query: 162 FRRM----PERNVVSWNTIIKALSECGRIED-----------AQWHFNQMRERDVKSWTT 206
F M + N ++ T+ L+ C R +W+++ + ++
Sbjct: 141 FAEMMRSDGKPNEFTFATV---LTSCIRASGLGLGKQIHGLIVKWNYDS----HIFVGSS 193
Query: 207 MVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE------ 260
++D A G++ +ARE+F+ +P R+VVS +I GYA+ +EALE+F R+
Sbjct: 194 LLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPN 253
Query: 261 -----------------------------RDMPSW----NTLVTGFIQNGDLNRAEKLFH 287
R++P + N+L+ + + G+L+ A +LF
Sbjct: 254 YVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFD 313
Query: 288 EMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACS 341
MP++ I+W AM+ GY +HGL E L++F ++ + +KP+ T + VL CS
Sbjct: 314 NMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS 367
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 171/379 (45%), Gaps = 68/379 (17%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF------DG-PDAMKD------ 107
++DARK+ D MPE+++ W MI+ Y G EA +F DG P+
Sbjct: 103 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTS 162
Query: 108 ----------------VVTW---------TALVNGYVKLNQIEEAERLFYEMPERNVRSW 142
+V W ++L++ Y K QI+EA +F +PER+V S
Sbjct: 163 CIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSC 222
Query: 143 NTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRE 198
+I GYA+ G E+AL++F R+ N V++ +++ ALS ++ + +
Sbjct: 223 TAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR 282
Query: 199 RDVKSWT----TMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALEL 254
R++ + +++D + G + AR LFD MP R +SWN M+ GY+K+ E LEL
Sbjct: 283 RELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLEL 342
Query: 255 FERM--PERDMPSWNTLVT-------GFIQNGDLNRAEKL----FHEMPQKNVITWTAMM 301
F M +R P TL+ G +++ LN + + + P M
Sbjct: 343 FRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDM 402
Query: 302 TGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI-HQLISKTA 360
G + G +EA + ++ + KP G ++LGAC ++ G+ + +LI
Sbjct: 403 LG--RAGRIDEAFEFIKRMPS----KPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEP 456
Query: 361 FQESTYVVSALINMYSKCG 379
YV+ L N+Y+ G
Sbjct: 457 ENAGNYVI--LSNLYASAG 473
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF----DGPDA 104
N+ I + G + AR+LFD MPER W M+ GY G+ +E +LF D
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEM------PERNVRSWNTMIDGYARNGQTEKA 158
D VT A+++G + +F M + + ++D R G+ ++A
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 159 LDLFRRMPER 168
+ +RMP +
Sbjct: 413 FEFIKRMPSK 422
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/593 (30%), Positives = 306/593 (51%), Gaps = 43/593 (7%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG----PD 103
CN+ +S + GRI++A LF RM +DL W +I GY +A +LF D
Sbjct: 266 CNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGD 325
Query: 104 AMKDVVTWTALVNGYVKLNQIEEAERLF-------YEMPERNVRSWNTMIDGYARNGQTE 156
D VT +++ +L + + + Y + + +V N +I YAR G T
Sbjct: 326 VSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVG--NALISFYARFGDTS 383
Query: 157 KALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTM--------- 207
A F M ++++SWN I+ A ++ + Q+ F + + T+
Sbjct: 384 AAYWAFSLMSTKDIISWNAILDAFADSPK----QFQFLNLLHHLLNEAITLDSVTILSLL 439
Query: 208 -----VDGLA----INGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM 258
V G+ ++G A L D + N ++ YAK ++ A ++F +
Sbjct: 440 KFCINVQGIGKVKEVHGYSVKAGLLHDEEEPK---LGNALLDAYAKCGNVEYAHKIFLGL 496
Query: 259 PE-RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIF 317
E R + S+N+L++G++ +G + A+ LF EM ++ TW+ M+ Y + EA+ +F
Sbjct: 497 SERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVF 556
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
++QA ++PNT T + +L C+ LA L+ +Q H I + + + L+++Y+K
Sbjct: 557 REIQA-RGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGD-IRLKGTLLDVYAK 614
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
CG L A +F +RDL+ + M+A YA HG GKEA+ +++ M E + + V
Sbjct: 615 CGSLKHAYSVFQSD--ARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFIT 672
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGV 497
+LTAC HAGL+++GLQ +D + ++ + YAC VDL R GRL +A++ + + V
Sbjct: 673 TMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPV 732
Query: 498 DLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANV 557
+ + ++WG LL C + D+G VA +L+ E ++ G + L+SNMYA+ KW+ +
Sbjct: 733 EPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMEL 792
Query: 558 RMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
R MK K +KK GCSW+EV VFV GD SH + + + L+ L+ +MK+
Sbjct: 793 RNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFDLVNALYLQMKE 845
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 236/533 (44%), Gaps = 63/533 (11%)
Query: 60 RIDDARKLFDRMPERDLHLWGTMINGY-IMCGVIKEARKLFD----GPDAMKDVVTWTAL 114
R+DD +K+F +M D +W ++ G + CG +E + F + VT+ +
Sbjct: 71 RMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCG--RETMRFFKAMHFADEPKPSSVTFAIV 128
Query: 115 VNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQT-EKALDLFRRMPERN 169
+ V+L + + + E++ N ++ YA+ G A F + +++
Sbjct: 129 LPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKD 188
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQM-RERDVKSWTTMVDGLAINGRVD------DARE 222
VVSWN II SE + DA F M +E ++ T+ + L + +D R+
Sbjct: 189 VVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQ 248
Query: 223 LFDRMPVRN-----VVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNG 277
+ + R+ V N ++ Y + R++EA LF RM +D+ SWN ++ G+ N
Sbjct: 249 IHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNC 308
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
+ +A +LFH + K ++ P++ T +++L
Sbjct: 309 EWFKAFQLFHNLVHKGDVS-------------------------------PDSVTIISIL 337
Query: 338 GACSDLAGLNEGQQIHQLISKTAF-QESTYVVSALINMYSKCGELHIARRIFDEGLLRQR 396
C+ L L G++IH I + ++ E T V +ALI+ Y++ G+ A F L+ +
Sbjct: 338 PVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAF--SLMSTK 395
Query: 397 DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYF 456
D+ISWN ++ A+A + +NL + + + VT + LL C + + + +
Sbjct: 396 DIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVH 455
Query: 457 DKLLKNRSIQVREDHYA--CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVH 514
+K + E+ L+D + G ++ A I GL +L + LL+G
Sbjct: 456 GYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNS 515
Query: 515 GNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
G+ D +++ ++ + T+SL+ +YA EA V +++ +G++
Sbjct: 516 GSHDDAQML---FTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 201/640 (31%), Positives = 318/640 (49%), Gaps = 99/640 (15%)
Query: 47 DCNTSISRLC---QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF---- 99
D S LC Q G + DA K+FD MP RDL W T+++ + G + +A ++F
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMV 194
Query: 100 -DG--PDAMK-------------------------------DVVTWTALVNGYVKLNQIE 125
DG PDA+ D +L+ Y K +
Sbjct: 195 DDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLL 254
Query: 126 EAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALS 181
+ER+F ++ ++N SW MI Y R +EKAL F M E N+V T+ LS
Sbjct: 255 SSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLV---TLYSVLS 311
Query: 182 ECGRI----EDAQWH-FNQMRERDVKSWT---TMVDGLAINGRVDDARELFDRMPVRNVV 233
CG I E H F RE D + +V+ A G++ D + + RN+V
Sbjct: 312 SCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIV 371
Query: 234 SWNVMIKGYAKNRRLDEALELFERM-PERDMPSWNTLVTG-------------------- 272
+WN +I YA + +AL LF +M +R P TL +
Sbjct: 372 AWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHV 431
Query: 273 --------FIQN---------GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
F+QN G ++ A +F+++ ++V+TW +M+ G+ Q+G S EA+
Sbjct: 432 IRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAIS 491
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
+F+ + + L+ N TF+ V+ ACS + L +G+ +H + + ++ + +ALI+MY
Sbjct: 492 LFDYMYHSY-LEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMY 549
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
+KCG+L+ A +F + R ++SW+ MI AY HG AI+ FN+M E G + N+V
Sbjct: 550 AKCGDLNAAETVFRA--MSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVV 607
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
++ +L+AC H+G VEEG YF+ L+K+ + +H+AC +DL R+G LKEA+ I+ +
Sbjct: 608 FMNVLSACGHSGSVEEGKYYFN-LMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEM 666
Query: 496 GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAA 555
SVWG L+ GC +H DI K + + I ++ G Y+LLSN+YA G+W+E
Sbjct: 667 PFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFR 726
Query: 556 NVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
+R MK LKK PG S +E+ V F G+++ Q++
Sbjct: 727 RLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTD 766
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 138/300 (46%), Gaps = 9/300 (3%)
Query: 261 RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKL 320
RD L+ + G + + +F P + + ++ V L + A+ ++++L
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 321 QADHALKPNTGTFVTVLGACS-DLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
++ + + F +VL AC+ L+ G ++H I K + + ++L+ MY + G
Sbjct: 92 VSE-TTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTG 150
Query: 380 ELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
L A ++FD + RDL++W+ ++++ +G +A+ +F M + G + + VT + +
Sbjct: 151 NLSDAEKVFDG--MPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISV 208
Query: 440 LTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDL 499
+ C+ G + ++ + + + E L+ + + G L + I E +
Sbjct: 209 VEGCAELGCLRIARSVHGQITR-KMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKN 267
Query: 500 SLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGKWKEAANV 557
++S W +++ N ++ +++K IEP YS+LS+ +G +E +V
Sbjct: 268 AVS-WTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSC-GLIGLIREGKSV 325
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 152/431 (35%), Positives = 238/431 (55%), Gaps = 44/431 (10%)
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM--------PER---------- 261
A +LFD MP R++VSWN +I GY+ L + E+ RM P
Sbjct: 85 AEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISAC 144
Query: 262 -----------------------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWT 298
++ N + + + GDL + KLF ++ KN+++W
Sbjct: 145 VYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWN 204
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
M+ ++Q+GL+E+ L FN + +P+ TF+ VL +C D+ + Q IH LI
Sbjct: 205 TMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAI 418
F + + +AL+++YSK G L + +F E + D ++W M+AAYA HG+G++AI
Sbjct: 264 GGFSGNKCITTALLDLYSKLGRLEDSSTVFHE--ITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL 478
F M G + VT+ LL ACSH+GLVEEG YF+ + K I R DHY+C+VDL
Sbjct: 322 KHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDL 381
Query: 479 CGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTY 538
GR+G L++A+ +I+ + ++ S VWG LL C V+ + +G A+++ ++EP + Y
Sbjct: 382 LGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNY 441
Query: 539 SLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLG 598
+LSN+Y++ G WK+A+ +R MK KGL + GCS++E GN + FVVGD SH +SE +
Sbjct: 442 VMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQ 501
Query: 599 YLLLDLHTKMK 609
L ++ KMK
Sbjct: 502 KKLKEIRKKMK 512
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 129/297 (43%), Gaps = 56/297 (18%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP------E 167
LV Y++L AE+LF EMPER++ SWN++I GY+ G K ++ RM
Sbjct: 72 LVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFR 131
Query: 168 RNVVSWNTIIKALSECGRIEDAQW------HFNQMRERDVKSWTTMVDGLAINGRVDDAR 221
N V++ ++I A G E+ + F + E VK ++ G + +
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEE--VKVVNAFINWYGKTGDLTSSC 189
Query: 222 ELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER--DMPSWNTLVT-------- 271
+LF+ + ++N+VSWN MI + +N ++ L F M R P T +
Sbjct: 190 KLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDM 248
Query: 272 ----------------GFIQN--------------GDLNRAEKLFHEMPQKNVITWTAMM 301
GF N G L + +FHE+ + + WTAM+
Sbjct: 249 GVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAML 308
Query: 302 TGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
Y HG +A+K F +L + + P+ TF +L ACS + EG+ + +SK
Sbjct: 309 AAYATHGFGRDAIKHF-ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSK 364
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 198/467 (42%), Gaps = 95/467 (20%)
Query: 30 FLRTMSTSTSSLHSAMKDC-NTSISRL--CQ--------EGRIDD--------------A 64
F+ ++ + SSL +A+K C + + RL C+ G I D A
Sbjct: 26 FVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCA 85
Query: 65 RKLFDRMPERDLHLWGTMINGY------------------------------------IM 88
KLFD MPERDL W ++I+GY +
Sbjct: 86 EKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACV 145
Query: 89 CGVIKEARKLFDGP----DAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT 144
G KE + G +++V A +N Y K + + +LF ++ +N+ SWNT
Sbjct: 146 YGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNT 205
Query: 145 MIDGYARNGQTEKALDLF---RRMP-ERNVVSWNTIIKALSECGRIEDAQ-----WHFNQ 195
MI + +NG EK L F RR+ E + ++ ++++ + G + AQ F
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGG 265
Query: 196 MRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELF 255
+ T ++D + GR++D+ +F + + ++W M+ YA + +A++ F
Sbjct: 266 FSGNKCIT-TALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHF 324
Query: 256 ERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT-----WTAMMTGYVQ 306
E M D ++ L+ +G + + F M ++ I ++ M+ +
Sbjct: 325 ELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGR 384
Query: 307 HGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQES-T 365
GL ++A + ++ ++P++G + +LGAC G + + + + ++
Sbjct: 385 SGLLQDAYGLIKEM----PMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRN 440
Query: 366 YVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
YV+ L N+YS G A RI L++Q+ L+ +G +Y HG
Sbjct: 441 YVM--LSNIYSASGLWKDASRI--RNLMKQKGLVRASG--CSYIEHG 481
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 167/576 (28%), Positives = 295/576 (51%), Gaps = 72/576 (12%)
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL 161
D D + TA ++ Y K + +++A+ LF N +S+N MI GY++ KAL L
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLL 369
Query: 162 FRRMPERN----------VVSWNTIIKALSE----------------------------- 182
F R+ V ++K LSE
Sbjct: 370 FHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGK 429
Query: 183 CGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVM 238
C + +A F++MR RD SW ++ NG+ + LF M + ++ +
Sbjct: 430 CQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSI 489
Query: 239 IKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQ----------------------- 275
+K L +E+ + + M S +++ I
Sbjct: 490 LKA-CTGGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRAN 548
Query: 276 -NGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFV 334
+G + EK+ ++ Q+ ++W ++++GYV SE+A +F ++ + + P+ T+
Sbjct: 549 VSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM-EMGITPDKFTYA 607
Query: 335 TVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR 394
TVL C++LA G+QIH + K Q Y+ S L++MYSKCG+LH +R +F++ L
Sbjct: 608 TVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSL-- 665
Query: 395 QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
+RD ++WN MI YAHHG G+EAI LF +M + N VT++ +L AC+H GL+++GL+
Sbjct: 666 RRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLE 725
Query: 455 YFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVH 514
YF + ++ + + HY+ +VD+ G++G++K A +I + + +W LL C +H
Sbjct: 726 YFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIH 785
Query: 515 -GNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 573
N ++ + +L+++P+++ Y+LLSN+YA G W++ +++R M+ LKK+PGCS
Sbjct: 786 RNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCS 845
Query: 574 WVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
WVE+ + + VF+VGDK+H + E + L ++++MK
Sbjct: 846 WVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 213/476 (44%), Gaps = 86/476 (18%)
Query: 64 ARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQ 123
A +FD+MP RD+ W MINGY + +A F+ ++DVV+W +
Sbjct: 102 ASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMM-PVRDVVSWNS---------- 150
Query: 124 IEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSE 182
M+ GY +NG++ K++++F M + T L
Sbjct: 151 ---------------------MLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKV 189
Query: 183 CGRIEDA----QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSW 235
C +ED Q H +R + DV + + ++D A R ++ +F +P +N VSW
Sbjct: 190 CSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSW 249
Query: 236 NVMIKGYAKNRRLDEALELFERMPE--------------RDMPSWNTLVTG--------- 272
+ +I G +N L AL+ F+ M + R + + L G
Sbjct: 250 SAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALK 309
Query: 273 --FIQNG--------------DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKI 316
F +G ++ A+ LF N ++ AM+TGY Q +AL +
Sbjct: 310 SDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLL 369
Query: 317 FNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
F++L + L + + V AC+ + GL+EG QI+ L K++ V +A I+MY
Sbjct: 370 FHRLMSS-GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYG 428
Query: 377 KCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
KC L A R+FDE +R+RD +SWN +IAA+ +G G E + LF M + ++ T+
Sbjct: 429 KCQALAEAFRVFDE--MRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTF 486
Query: 437 VELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC-LVDLCGRAGRLKEAFNI 491
+L AC+ G + G++ ++K S C L+D+ + G ++EA I
Sbjct: 487 GSILKACT-GGSLGYGMEIHSSIVK--SGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 231/502 (46%), Gaps = 68/502 (13%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVS 172
L+ Y A +F +MP R+V SWN MI+GY+++ KA F MP R+VVS
Sbjct: 88 CLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVS 147
Query: 173 WNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVD----------GLAINGRVD 218
WN+++ + G + F M E D +++ ++ G+ I+G V
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIV- 206
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGD 278
R D +VV+ + ++ YAK +R E+L +F+ +PE++ SW+ ++ G +QN
Sbjct: 207 -VRVGCD----TDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNL 261
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
L+ A K F EM + N G+S+ + +VL
Sbjct: 262 LSLALKFFKEMQKVNA-------------GVSQ-------------------SIYASVLR 289
Query: 339 ACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFD--EGLLRQR 396
+C+ L+ L G Q+H K+ F V +A ++MY+KC + A+ +FD E L RQ
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQ- 348
Query: 397 DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYF 456
S+N MI Y+ +G +A+ LF+++ G ++++ + AC+ + EGLQ +
Sbjct: 349 ---SYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Query: 457 DKLLKNR-SIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG--CNV 513
+K+ S+ V + A +D+ G+ L EAF + + + ++S W ++A N
Sbjct: 406 GLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEMRRRDAVS-WNAIIAAHEQNG 462
Query: 514 HGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQP--G 571
G + V+ +IEP+ S+L + G + + G+ G
Sbjct: 463 KGYETLFLFVSMLRSRIEPDEFTFGSILKA--CTGGSLGYGMEIHSSIVKSGMASNSSVG 520
Query: 572 CSWVEVGNTVQVFVVGDKSHSQ 593
CS +++ + + +K HS+
Sbjct: 521 CSLIDMYSKCGMIEEAEKIHSR 542
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 148/302 (49%), Gaps = 10/302 (3%)
Query: 168 RNVVSWNTIIKALSECGRIEDAQWH---FNQMRERDVKSWTTMVDGLAINGRVDDARELF 224
R+VVS+N + R+ + NQ+ +++ + A G ++ ++
Sbjct: 12 RSVVSFNRCLTEKISYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQAH 71
Query: 225 DRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLN 280
M + N +++ Y +R A +F++MP RD+ SWN ++ G+ ++ D+
Sbjct: 72 AHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMF 131
Query: 281 RAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC 340
+A F+ MP ++V++W +M++GY+Q+G S +++++F + ++ + TF +L C
Sbjct: 132 KANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM-GREGIEFDGRTFAIILKVC 190
Query: 341 SDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS 400
S L + G QIH ++ + SAL++MY+K + R+F + +++ +S
Sbjct: 191 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG--IPEKNSVS 248
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLL 460
W+ +IA + A+ F +MQ++ + Y +L +C+ + G Q L
Sbjct: 249 WSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHAL 308
Query: 461 KN 462
K+
Sbjct: 309 KS 310
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 121/269 (44%), Gaps = 50/269 (18%)
Query: 81 TMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
++I+ Y CG+I+EA K+ A V+G +EE E++ + +
Sbjct: 522 SLIDMYSKCGMIEEAEKI-------HSRFFQRANVSG-----TMEELEKMHNKRLQEMCV 569
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSECGRIEDA----QWHFNQ 195
SWN++I GY Q+E A LF RM E + T L C + A Q H
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Query: 196 MR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEAL 252
++ + DV +T+VD + G + D+R +F++ R+ V+WN MI GYA + + +EA+
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 689
Query: 253 ELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
+LFERM E + N +T+ +++ GL ++
Sbjct: 690 QLFERM---------------------------ILENIKPNHVTFISILRACAHMGLIDK 722
Query: 313 ALKIFNKLQADHALK---PNTGTFVTVLG 338
L+ F ++ D+ L P+ V +LG
Sbjct: 723 GLEYFYMMKRDYGLDPQLPHYSNMVDILG 751
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 21/250 (8%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMIN---GYIMCGVIKEARKLFDG 101
N+ IS + + +DA+ LF RM E D + T+++ G+ K+
Sbjct: 572 NSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIK 631
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL 161
+ DV + LV+ Y K + ++ +F + R+ +WN MI GYA +G+ E+A+ L
Sbjct: 632 KELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQL 691
Query: 162 FRRMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMR-----ERDVKSWTTMVDGLA 212
F RM N+ V++ +I++A + G I+ +F M+ + + ++ MVD L
Sbjct: 692 FERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILG 751
Query: 213 INGRVDDARELFDRMPVR-NVVSWNVMIKGYAKNRR----LDEALELFERMPERDMPSWN 267
+G+V A EL MP + V W ++ +R +EA R+ +D ++
Sbjct: 752 KSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYT 811
Query: 268 TLVTGFIQNG 277
L + G
Sbjct: 812 LLSNVYADAG 821
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD 100
L S + C+T + + G + D+R +F++ RD W MI GY G +EA +LF+
Sbjct: 634 LQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFE 693
Query: 101 G---PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP-----ERNVRSWNTMIDGYARN 152
+ + VT+ +++ + I++ FY M + + ++ M+D ++
Sbjct: 694 RMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKS 753
Query: 153 GQTEKALDLFRRMP-ERNVVSWNTII 177
G+ ++AL+L R MP E + V W T++
Sbjct: 754 GKVKRALELIREMPFEADDVIWRTLL 779
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 162/481 (33%), Positives = 279/481 (58%), Gaps = 23/481 (4%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSW 173
LV YV+ ++ +A ++F EMP+R++ MI ARNG +++LD FR M + +
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 174 NTIIKALSECGR-IEDAQWHFNQM---------RERDVKSWTTMVDGLAINGRVDDAREL 223
I+ +L + R + D + F +M E D ++++D + G V +AR++
Sbjct: 117 AFIVPSLLKASRNLLDRE--FGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKV 174
Query: 224 FDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDL 279
F + +++V +N MI GYA N + DEAL L + M + D+ +WN L++GF +
Sbjct: 175 FSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNE 234
Query: 280 NRAEKLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVT 335
+ ++ M + +V++WT++++G V + +E+A F ++ H L PN+ T +T
Sbjct: 235 EKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLT-HGLYPNSATIIT 293
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ 395
+L AC+ LA + G++IH T ++ +V SAL++MY KCG + A +F + +
Sbjct: 294 LLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKT--PK 351
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQY 455
+ +++N MI YA+HG +A+ LF++M+ G + + +T+ +LTACSHAGL + G
Sbjct: 352 KTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNL 411
Query: 456 FDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
F + I R +HYAC+VDL GRAG+L EA+ +I+ + ++ L VWG LLA C HG
Sbjct: 412 FLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHG 471
Query: 516 NADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWV 575
N ++ ++ AK + ++EPEN+G LL+++YA+ G W+ ++ +K K ++ G SWV
Sbjct: 472 NMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSSWV 531
Query: 576 E 576
E
Sbjct: 532 E 532
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 190/411 (46%), Gaps = 61/411 (14%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMI-----NGY---------------------IMCGVI 92
G++ DARK+FD MP+RD+ MI NGY I+ ++
Sbjct: 65 GKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLL 124
Query: 93 KEARKLFDGP------------DAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
K +R L D D ++L++ Y K ++ A ++F ++ E+++
Sbjct: 125 KASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLV 184
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQM 196
+N MI GYA N Q ++AL+L + M + +V++WN +I S E M
Sbjct: 185 VFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELM 244
Query: 197 ----RERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMI---------KGYA 243
+ DV SWT+++ GL N + + A + F +M + + I Y
Sbjct: 245 CLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYM 304
Query: 244 KNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG 303
K+ + + + + + L+ + + G ++ A LF + P+K +T+ +M+
Sbjct: 305 KHGKEIHGYSVVTGLEDHGFVR-SALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFC 363
Query: 304 YVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE-GQQIHQLI-SKTAF 361
Y HGL+++A+++F++++A K + TF +L ACS AGL + GQ + L+ +K
Sbjct: 364 YANHGLADKAVELFDQMEATGE-KLDHLTFTAILTACSH-AGLTDLGQNLFLLMQNKYRI 421
Query: 362 QESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
+ ++++ + G+L A + + + + DL W ++AA +HG
Sbjct: 422 VPRLEHYACMVDLLGRAGKLVEAYEMI-KAMRMEPDLFVWGALLAACRNHG 471
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 99/207 (47%), Gaps = 6/207 (2%)
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
+ G++V ++ A G+ +H + + T + + L+ Y +CG++ AR++F
Sbjct: 15 SIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVF 74
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGL 448
DE + +RD+ MI A A +GY +E+++ F +M + G + + LL A S L
Sbjct: 75 DE--MPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA-SRNLL 131
Query: 449 VEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLL 508
E + L+ S + + L+D+ + G + A + LG + L V+ ++
Sbjct: 132 DREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG-EQDLVVFNAMI 190
Query: 509 AGCNVHGNADIGKLVAK--KILKIEPE 533
+G + AD + K K+L I+P+
Sbjct: 191 SGYANNSQADEALNLVKDMKLLGIKPD 217
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 152/439 (34%), Positives = 258/439 (58%), Gaps = 15/439 (3%)
Query: 171 VSWNTIIKALSECGRIEDAQWHFNQMRERDVK-SWTTMVDGLAINGRVDDARELFDRM-- 227
VSW + I L+ GR+ +A F+ M V+ + T + L+ G E +
Sbjct: 37 VSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLH 96
Query: 228 --------PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDL 279
+V+ +I Y+K R +A +F+ M +++ +WNT++ G++++G +
Sbjct: 97 GYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQV 156
Query: 280 NRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
+ A K+F +MP++++I+WTAM+ G+V+ G EEAL F ++Q +KP+ + L A
Sbjct: 157 DNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDYVAIIAALNA 215
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
C++L L+ G +H+ + F+ + V ++LI++Y +CG + AR++F + +R ++
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN--MEKRTVV 273
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
SWN +I +A +G E++ F KMQE GF+ + VT+ LTACSH GLVEEGL+YF +
Sbjct: 274 SWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
Query: 460 LKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADI 519
+ I R +HY CLVDL RAGRL++A +++ + + + V G LLA C+ HGN +
Sbjct: 334 KCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSNHGNNIV 393
Query: 520 -GKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVG 578
+ + K + + ++ Y +LSNMYA+ GKW+ A+ +R KMK GLKKQPG S +E+
Sbjct: 394 LAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEID 453
Query: 579 NTVQVFVVGDKSHSQSELL 597
+ + VF+ GD +H ++ +
Sbjct: 454 DCMHVFMAGDNAHVETTYI 472
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 165/349 (47%), Gaps = 38/349 (10%)
Query: 7 LSFILMHAPKLKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARK 66
L + + +P L TH + P ++ + STS + + I+ L + GR+ +A K
Sbjct: 4 LPVVGITSPALITHKN---HANPKIQRHNQSTSETTVSW---TSRINLLTRNGRLAEAAK 57
Query: 67 LFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKD---------------VVTW 111
F D+ L G N ++ G +A+ D V+
Sbjct: 58 EFS-----DMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVG 112
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV 171
TA++ Y K + ++A +F M ++N +WNTMIDGY R+GQ + A +F +MPER+++
Sbjct: 113 TAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLI 172
Query: 172 SWNTIIKALSECGRIEDAQWHFNQMRERDVK-SWTTMVDGL-------AINGRVDDAREL 223
SW +I + G E+A F +M+ VK + ++ L A++ + R +
Sbjct: 173 SWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYV 232
Query: 224 FDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAE 283
+ NV N +I Y + ++ A ++F M +R + SWN+++ GF NG+ + +
Sbjct: 233 LSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESL 292
Query: 284 KLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
F +M +K + +T+T +T GL EE L+ F ++ D+ + P
Sbjct: 293 VYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISP 341
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 285 bits (729), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 188/587 (32%), Positives = 306/587 (52%), Gaps = 59/587 (10%)
Query: 77 HLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE 136
+L +N Y CG + AR F + +V ++ +V Y K ++I A +LF E+P+
Sbjct: 44 YLSNHFVNLYSKCGRLSYARAAFYSTEE-PNVFSYNVIVKAYAKDSKIHIARQLFDEIPQ 102
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSECGRIE-DAQW 191
+ S+NT+I GYA +T A+ LF+RM E + + + +I A C R++ Q
Sbjct: 103 PDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAAC--CDRVDLIKQL 160
Query: 192 H-FNQMRERDVKSWT--TMVDGLAINGRVDDARELFDRM-PVRNVVSWNVMIKGYAKNRR 247
H F+ D S V + G + +A +F M +R+ VSWN MI Y +++
Sbjct: 161 HCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKE 220
Query: 248 LDEALELFERMPER----DMPSWNTLV---------------------TGFIQNGDLNR- 281
+AL L++ M + DM + +++ GF QN +
Sbjct: 221 GAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSG 280
Query: 282 ----------------AEKLFHEMPQKNVITWTAMMTGY-VQHGLSEEALKIFNKLQADH 324
+EK+F E+ +++ W M++GY + LSEEA+K F ++Q
Sbjct: 281 LIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRI- 339
Query: 325 ALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS-ALINMYSKCGELHI 383
+P+ +FV V ACS+L+ ++ +QIH L K+ + V+ ALI++Y K G L
Sbjct: 340 GHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQD 399
Query: 384 ARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
AR +FD + + + +S+N MI YA HG+G EA+ L+ +M + G N +T+V +L+AC
Sbjct: 400 ARWVFDR--MPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSAC 457
Query: 444 SHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSV 503
+H G V+EG +YF+ + + I+ +HY+C++DL GRAG+L+EA I+ +
Sbjct: 458 AHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVA 517
Query: 504 WGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKD 563
W LL C H N + + A +++ ++P A Y +L+NMYA KW+E A+VR M+
Sbjct: 518 WAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRG 577
Query: 564 KGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
K ++K+PGCSW+EV VFV D SH + L ++ KMKK
Sbjct: 578 KRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKK 624
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 110/236 (46%), Gaps = 50/236 (21%)
Query: 63 DARKLFDRMPERDLHLWGTMINGYIM--------CGVIKEARKLFDGPDAMKDVVTWT-- 112
D+ K+F + DL +W TMI+GY M ++ +++ PD V +
Sbjct: 296 DSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSAC 355
Query: 113 ------------------------------ALVNGYVKLNQIEEAERLFYEMPERNVRSW 142
AL++ Y K +++A +F MPE N S+
Sbjct: 356 SNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSF 415
Query: 143 NTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRE 198
N MI GYA++G +AL L++RM + N +++ ++ A + CG++++ Q +FN M+E
Sbjct: 416 NCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKE 475
Query: 199 R-----DVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMIKGYAKNRRL 248
+ + ++ M+D L G++++A D MP + V+W ++ K++ +
Sbjct: 476 TFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNM 531
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 11/141 (7%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA----RKLFDGPDA 104
N IS + G + DAR +FDRMPE + + MI GY G EA +++ D A
Sbjct: 385 NALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIA 444
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPER-----NVRSWNTMIDGYARNGQTEKAL 159
+ +T+ A+++ +++E + F M E ++ MID R G+ E+A
Sbjct: 445 -PNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 160 DLFRRMPER-NVVSWNTIIKA 179
MP + V+W ++ A
Sbjct: 504 RFIDAMPYKPGSVAWAALLGA 524
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 167/592 (28%), Positives = 314/592 (53%), Gaps = 59/592 (9%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD 100
L S + CN+ I + G+++ +RK+F+ M +R+L
Sbjct: 120 LESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLS----------------------- 156
Query: 101 GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTE 156
+W ++++ Y KL +++A L EM + ++ +WN+++ GYA G ++
Sbjct: 157 ---------SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSK 207
Query: 157 KALDLFRRM------PERNVVSWNTIIKALSECGRIEDAQ-WHFNQMRER---DVKSWTT 206
A+ + +RM P + +S ++++A++E G ++ + H +R + DV TT
Sbjct: 208 DAIAVLKRMQIAGLKPSTSSIS--SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETT 265
Query: 207 MVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----D 262
++D G + AR +FD M +N+V+WN ++ G + L +A L RM + D
Sbjct: 266 LIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 263 MPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFN 318
+WN+L +G+ G +A + +M +K NV++WTA+ +G ++G ALK+F
Sbjct: 326 AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
K+Q + + PN T T+L L+ L+ G+++H + YV +AL++MY K
Sbjct: 386 KMQ-EEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKS 444
Query: 379 GELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVE 438
G+L A IF ++ + L SWN M+ YA G G+E I F+ M E G + + +T+
Sbjct: 445 GDLQSAIEIFWG--IKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502
Query: 439 LLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVD 498
+L+ C ++GLV+EG +YFD + I +H +C+VDL GR+G L EA++ I+ + +
Sbjct: 503 VLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK 562
Query: 499 LSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVR 558
++WG L+ C +H + ++ ++ K++ +EP N+ Y ++ N+Y+++ +W++ +R
Sbjct: 563 PDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIR 622
Query: 559 MKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
M++ ++ Q SW+++ TV +F K+H + + L L ++MKK
Sbjct: 623 NLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKK 674
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/459 (24%), Positives = 217/459 (47%), Gaps = 57/459 (12%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSEC-- 183
A +LF EMP+R+ +WN ++ R+G EKA++LFR M +++ T++K L C
Sbjct: 42 ANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSN 101
Query: 184 --GRIEDAQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVM 238
G E Q H +R E +V +++ + NG+++ +R++F+ M RN+ SWN +
Sbjct: 102 KEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSI 161
Query: 239 IKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV 294
+ Y K +D+A+ L + M + D+ +WN+L
Sbjct: 162 LSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSL------------------------- 196
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
++GY GLS++A+ + ++Q LKP+T + ++L A ++ L G+ IH
Sbjct: 197 ------LSGYASKGLSKDAIAVLKRMQI-AGLKPSTSSISSLLQAVAEPGHLKLGKAIHG 249
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
I + YV + LI+MY K G L AR +FD ++ +++++WN +++ ++
Sbjct: 250 YILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFD--MMDAKNIVAWNSLVSGLSYACLL 307
Query: 415 KEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC 474
K+A L +M++ G + + +T+ L + + G E+ L K +K + + +
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGK-MKEKGVAPNVVSWTA 366
Query: 475 LVDLCGRAGRLKEAFNII-----EGLGVDLSLSVWGPLLAGC--NVHGNADIGKLVAKKI 527
+ C + G + A + EG+G + + + GC +H ++ +K
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 528 LKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
L + A + L +MY G + A + +K+K L
Sbjct: 427 LICDAYVA---TALVDMYGKSGDLQSAIEIFWGIKNKSL 462
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 185/379 (48%), Gaps = 68/379 (17%)
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
L A KLF EMP+++ + W ++ ++ G E+A+++F ++Q A K T V +L
Sbjct: 39 LGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGA-KAYDSTMVKLLQ 97
Query: 339 ACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDL 398
CS+ G EG+QIH + + + + + ++LI MYS+ G+L ++R++F+ ++ R+L
Sbjct: 98 VCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNS--MKDRNL 155
Query: 399 ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDK 458
SWN ++++Y GY +AI L ++M+ G + + VT+ LL+ + GL ++ + +
Sbjct: 156 SSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKR 215
Query: 459 L-----------------------------------LKNRSIQVREDHY--ACLVDLCGR 481
+ L+N Q+ D Y L+D+ +
Sbjct: 216 MQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRN---QLWYDVYVETTLIDMYIK 272
Query: 482 AGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPE----NAGT 537
G L A + + + ++ W L++G + A + K ++++E E +A T
Sbjct: 273 TGYLPYARMVFDMMDAK-NIVAWNSLVSGLSY---ACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 538 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEV----------GNTVQVFV-- 585
++ L++ YA++GK ++A +V KMK+KG+ SW + N ++VF+
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKMKEKGVAPNV-VSWTAIFSGCSKNGNFRNALKVFIKM 387
Query: 586 ----VGDKSHSQSELLGYL 600
VG + + S LL L
Sbjct: 388 QEEGVGPNAATMSTLLKIL 406
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 112/224 (50%), Gaps = 12/224 (5%)
Query: 349 GQQIHQLISKTAFQES-TYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAA 407
G IH + K S T VVSA + Y +C L A ++FDE + +RD ++WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDE--MPKRDDLAWNEIVMV 63
Query: 408 YAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQV 467
G ++A+ LF +MQ G +A D T V+LL CS+ EG Q +L+ + +
Sbjct: 64 NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR---LGL 120
Query: 468 REDHYAC--LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD--IGKLV 523
+ C L+ + R G+L+ + + + D +LS W +L+ G D IG L
Sbjct: 121 ESNVSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 524 AKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
+I ++P+ SLLS YAS G K+A V +M+ GLK
Sbjct: 180 EMEICGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLK 222
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 264/483 (54%), Gaps = 49/483 (10%)
Query: 174 NTIIKALSECGR----IEDAQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDR 226
N + + L C R +E H +R E DV +++ + G V+ AR++FD
Sbjct: 62 NLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDG 121
Query: 227 MPVRNVVSWNVMIKGYAKNRRLDEALELFERMP--------------------------- 259
M R++VSWN MI Y +NR EAL++F M
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 260 ------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQH 307
+ ++ L+ + + G + A ++F M K+ +TW++M+ GYVQ+
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 308 GLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYV 367
EEAL ++ + Q +L+ N T +V+ ACS+LA L EG+Q+H +I K+ F + +V
Sbjct: 242 KNYEEALLLYRRAQ-RMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFV 300
Query: 368 VSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL 427
S+ ++MY+KCG L + IF E +++++L WN +I+ +A H KE + LF KMQ+
Sbjct: 301 ASSAVDMYAKCGSLRESYIIFSE--VQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 358
Query: 428 GFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKE 487
G N+VT+ LL+ C H GLVEEG ++F + + HY+C+VD+ GRAG L E
Sbjct: 359 GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSE 418
Query: 488 AFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYAS 547
A+ +I+ + D + S+WG LLA C V+ N ++ ++ A+K+ ++EPENAG + LLSN+YA+
Sbjct: 419 AYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAA 478
Query: 548 VGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTK 607
+W+E A R ++D +KK G SW+++ + V F VG+ H + + L +L K
Sbjct: 479 NKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIK 538
Query: 608 MKK 610
+K
Sbjct: 539 FRK 541
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 156/328 (47%), Gaps = 51/328 (15%)
Query: 103 DAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLF 162
D DV L+N Y K +E A ++F M ER++ SWNTMI Y RN +ALD+F
Sbjct: 91 DLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIF 150
Query: 163 RRMPERNV-VSWNTIIKALSECG----RIEDAQWHFNQMR---ERDVKSWTTMVDGLAIN 214
M S TI LS CG +E + H ++ + ++ T ++D A
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKC 210
Query: 215 GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLV 270
G + DA ++F+ M ++ V+W+ M+ GY +N+ +EAL L+ R E++ + ++++
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 271 ---------------------TGFIQN--------------GDLNRAEKLFHEMPQKNVI 295
+GF N G L + +F E+ +KN+
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
W +++G+ +H +E + +F K+Q D + PN TF ++L C + EG++ +L
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQD-GMHPNEVTFSSLLSVCGHTGLVEEGRRFFKL 389
Query: 356 ISKTAFQESTYVV--SALINMYSKCGEL 381
+ +T + S VV S ++++ + G L
Sbjct: 390 M-RTTYGLSPNVVHYSCMVDILGRAGLL 416
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 109/254 (42%), Gaps = 52/254 (20%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAM------------- 105
G I DA ++F+ M ++ W +M+ GY+ +EA L+ M
Sbjct: 211 GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVI 270
Query: 106 -------------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
+V ++ V+ Y K + E+ +F E+ E+N+
Sbjct: 271 CACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLE 330
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQM 196
WNT+I G+A++ + ++ + LF +M + N V++++++ G +E+ + F M
Sbjct: 331 LWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLM 390
Query: 197 RER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVS-WNVMIKG--YAKNRRL 248
R +V ++ MVD L G + +A EL +P S W ++ KN L
Sbjct: 391 RTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLEL 450
Query: 249 DE--ALELFERMPE 260
E A +LFE PE
Sbjct: 451 AEVAAEKLFELEPE 464
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/505 (32%), Positives = 279/505 (55%), Gaps = 32/505 (6%)
Query: 111 WTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV 170
W +LV Y++L AE++F MP +V S+N MI GYA+ G + +AL L+ +M +
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 171 -VSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPV 229
T++ L CG + D + G ++G ++ R PV
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRL------------------GKGVHGWIER------RGPV 264
Query: 230 --RNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFH 287
N++ N ++ Y K + A F+ M ++DM SWNT+V GF++ GD+ A+ +F
Sbjct: 265 YSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFD 324
Query: 288 EMPQKNVITWTAMMTGYVQHGLSEEALK-IFNKLQADHALKPNTGTFVTVLGACSDLAGL 346
+MP++++++W +++ GY + G + ++ +F ++ +KP+ T V+++ ++ L
Sbjct: 325 QMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 347 NEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIA 406
+ G+ +H L+ + + ++ SALI+MY KCG + A +F ++D+ W MI
Sbjct: 385 SHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTA--TEKDVALWTSMIT 442
Query: 407 AYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQ 466
A HG G++A+ LF +MQE G N+VT + +LTACSH+GLVEEGL F+ +
Sbjct: 443 GLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFD 502
Query: 467 VREDHYACLVDLCGRAGRLKEAFNIIE-GLGVDLSLSVWGPLLAGCNVHGNADIGKLVAK 525
+HY LVDL RAGR++EA +I++ + + S S+WG +L+ C + + +L
Sbjct: 503 PETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALT 562
Query: 526 KILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFV 585
++LK+EPE G Y LLSN+YA+VG+W + R M+++G+KK G S V + FV
Sbjct: 563 ELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFV 622
Query: 586 VGDK-SHSQSELLGYLLLDLHTKMK 609
+K +H + + +L L+ +MK
Sbjct: 623 AAEKQNHPRWTEIKRILQHLYNEMK 647
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 161/360 (44%), Gaps = 54/360 (15%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF--------- 99
N+ + + G A K+F RMP D+ + MI GY G EA KL+
Sbjct: 170 NSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIE 229
Query: 100 -------------------------------DGPDAMKDVVTWTALVNGYVKLNQIEEAE 128
GP +++ AL++ Y K + A+
Sbjct: 230 PDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAK 289
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECG---R 185
R F M ++++RSWNTM+ G+ R G E A +F +MP+R++VSWN+++ S+ G R
Sbjct: 290 RAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQR 349
Query: 186 IEDAQWHFNQMRER---DVKSWTTMVDGLAINGRVDDAR---ELFDRMPVR-NVVSWNVM 238
++ + E+ D + +++ G A NG + R L R+ ++ + + +
Sbjct: 350 TVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSAL 409
Query: 239 IKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV---- 294
I Y K ++ A +F+ E+D+ W +++TG +G+ +A +LF M ++ V
Sbjct: 410 IDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNN 469
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
+T A++T GL EE L +FN ++ P T + +++ + E + I Q
Sbjct: 470 VTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ 529
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 147/429 (34%), Positives = 253/429 (58%), Gaps = 4/429 (0%)
Query: 149 YARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMV 208
Y+R G E A F + E+N VSWN+++ E G +++A+ F+++ E+D SW ++
Sbjct: 149 YSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLII 208
Query: 209 DGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNT 268
A G + +A LF MP+++ SWN++I GY R + A F+ MP+++ SW T
Sbjct: 209 SSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWIT 268
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK-LQADHALK 327
+++G+ + GD+ AE+LF M +K+ + + AM+ Y Q+G ++ALK+F + L+ + ++
Sbjct: 269 MISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQ 328
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
P+ T +V+ A S L + G + I++ + + ++LI++Y K G+ A ++
Sbjct: 329 PDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKM 388
Query: 388 FDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAG 447
F L ++D +S++ MI +G EA +LF M E N VT+ LL+A SH+G
Sbjct: 389 FSN--LNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSG 446
Query: 448 LVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPL 507
LV+EG + F+ +K+ +++ DHY +VD+ GRAGRL+EA+ +I+ + + + VWG L
Sbjct: 447 LVQEGYKCFNS-MKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGAL 505
Query: 508 LAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
L +H N + G++ +K+E + G S L+ +Y+SVG+W +A VR +K+K L
Sbjct: 506 LLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLC 565
Query: 568 KQPGCSWVE 576
K GCSWVE
Sbjct: 566 KTLGCSWVE 574
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 178/371 (47%), Gaps = 44/371 (11%)
Query: 82 MINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS 141
++ Y G I+ A+K FD A K+ V+W +L++GY++ +++EA R+F ++PE++ S
Sbjct: 145 LVGLYSRLGYIELAKKAFDDI-AEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVS 203
Query: 142 WNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDV 201
WN +I YA+ G A LF MP ++ SWN +I C ++ A+ +F+ M +++
Sbjct: 204 WNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNG 263
Query: 202 KSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER 261
SW TM+ G G V A ELF M ++ + ++ MI Y +N + +AL+LF +M ER
Sbjct: 264 VSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLER 323
Query: 262 D------------------------MPSW-----------------NTLVTGFIQNGDLN 280
+ +W +L+ +++ GD
Sbjct: 324 NSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFA 383
Query: 281 RAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC 340
+A K+F + +K+ ++++AM+ G +G++ EA +F + + + PN TF +L A
Sbjct: 384 KAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAM-IEKKIPPNVVTFTGLLSAY 442
Query: 341 SDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS 400
S + EG + + + S +++M + G L A + + + Q +
Sbjct: 443 SHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELI-KSMPMQPNAGV 501
Query: 401 WNGMIAAYAHH 411
W ++ A H
Sbjct: 502 WGALLLASGLH 512
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 172/363 (47%), Gaps = 58/363 (15%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNG 117
G I+ A+K FD + E++ W ++++GY+ G + EAR++FD P+ KD V+W +++
Sbjct: 153 GYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPE--KDAVSWNLIISS 210
Query: 118 YVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTII 177
Y K + A LF MP ++ SWN +I GY + + A F MP++N VSW T+I
Sbjct: 211 YAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMI 270
Query: 178 KALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRN------ 231
++ G ++ A+ F M ++D + M+ NG+ DA +LF +M RN
Sbjct: 271 SGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPD 330
Query: 232 ------VVSWN-----------------------------VMIKGYAKNRRLDEALELFE 256
VVS N +I Y K +A ++F
Sbjct: 331 EITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFS 390
Query: 257 RMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEE 312
+ ++D S++ ++ G NG A LF M +K NV+T+T +++ Y GL +E
Sbjct: 391 NLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQE 450
Query: 313 ALKIFNKLQADHALKPNT---GTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS 369
K FN ++ DH L+P+ G V +LG L ++ ++LI Q + V
Sbjct: 451 GYKCFNSMK-DHNLEPSADHYGIMVDMLGRAGRL------EEAYELIKSMPMQPNAGVWG 503
Query: 370 ALI 372
AL+
Sbjct: 504 ALL 506
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 111/240 (46%), Gaps = 48/240 (20%)
Query: 30 FLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHL----------- 78
R MS ++ AM C T Q G+ DA KLF +M ER+ ++
Sbjct: 285 LFRLMSKKDKLVYDAMIACYT------QNGKPKDALKLFAQMLERNSYIQPDEITLSSVV 338
Query: 79 ----------WGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAE 128
+GT + YI IK + D+++ T+L++ Y+K +A
Sbjct: 339 SANSQLGNTSFGTWVESYITEHGIK-----------IDDLLS-TSLIDLYMKGGDFAKAF 386
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECG 184
++F + +++ S++ MI G NG +A LF M E+ NVV++ ++ A S G
Sbjct: 387 KMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSG 446
Query: 185 RIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMI 239
+++ FN M++ +++ + MVD L GR+++A EL MP++ N W ++
Sbjct: 447 LVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALL 506
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
+W ++ QH +E + ++ + + + P++ +VL AC + + +G+ IH
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMH-NSGIPPSSHAVTSVLRACGKMENMVDGKPIHA 128
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
K YV + L+ +YS+ G + +A++ FD+ + +++ +SWN ++ Y G
Sbjct: 129 QALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDD--IAEKNTVSWNSLLHGYLESGEL 186
Query: 415 KEAINLFNKMQE 426
EA +F+K+ E
Sbjct: 187 DEARRVFDKIPE 198
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/480 (32%), Positives = 271/480 (56%), Gaps = 15/480 (3%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER---- 168
+L+ Y K + AE +F EMPE NV SWN MI G+ + +++K+++ RM +
Sbjct: 289 SLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQP 348
Query: 169 NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMP 228
N V+ +++ A G +E + F+ + + V +W M+ G + ++A F +M
Sbjct: 349 NEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQ 408
Query: 229 VRNV----VSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFI----QNGDLN 280
+N+ + +V++ A+ R L+ ++ + ++ + +V+G I + +
Sbjct: 409 FQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKME 468
Query: 281 RAEKLFHE-MPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
+E +F + + + ++ W +M++G+ + L +AL +F ++ L PN +F TVL +
Sbjct: 469 ISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSS 528
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
CS L L G+Q H L+ K+ + ++V +AL +MY KCGE+ AR+ FD +LR+ +I
Sbjct: 529 CSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD-AVLRKNTVI 587
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
WN MI Y H+G G EA+ L+ KM G + + +T+V +LTACSH+GLVE GL+ +
Sbjct: 588 -WNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 646
Query: 460 LKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADI 519
+ I+ DHY C+VD GRAGRL++A + E S +W LL+ C VHG+ +
Sbjct: 647 QRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSL 706
Query: 520 GKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGN 579
+ VA+K+++++P+++ Y LLSN Y+S+ +W ++A ++ M + K PG SW GN
Sbjct: 707 ARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYGN 766
Score = 184 bits (466), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/570 (24%), Positives = 252/570 (44%), Gaps = 133/570 (23%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM 134
D +L +++ YI CG ARK+FD +++DV +W A + K+ + EA +F M
Sbjct: 40 DTYLCNRLLDLYIECGDGDYARKVFD-EMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGM 98
Query: 135 PERNVRSWNTMIDGYARNGQTEKALDLFRRM------PER-------------------- 168
PER+V SWN MI R G EKAL +++RM P R
Sbjct: 99 PERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGM 158
Query: 169 -------------NVVSWNTIIKALSECGRIEDAQWH-FNQMRERDVKSWTTMVDGLAIN 214
N+ N ++ ++CG I D F + + + S+T ++ GLA
Sbjct: 159 RCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARE 218
Query: 215 GRVDDARELF----------DRMPVRNVVSW----------------------------- 235
+V +A ++F D + + N++S
Sbjct: 219 NKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRL 278
Query: 236 ---------NVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQ----------- 275
N +++ YAKN+ ++ A +F MPE ++ SWN ++ GF Q
Sbjct: 279 GFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFL 338
Query: 276 ------------------------NGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSE 311
+GD+ ++F +PQ +V W AM++GY + E
Sbjct: 339 TRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYE 398
Query: 312 EALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
EA+ F ++Q + LKP+ T +L +C+ L L G+QIH ++ +T +++++VS L
Sbjct: 399 EAISNFRQMQFQN-LKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGL 457
Query: 372 INMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELG-FQ 430
I +YS+C ++ I+ IFD+ + + D+ WN MI+ + H+ +A+ LF +M +
Sbjct: 458 IAVYSECEKMEISECIFDD-CINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLC 516
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY--ACLVDLCGRAGRLKEA 488
N+ ++ +L++CS + G Q+ ++K+ + D + L D+ + G + A
Sbjct: 517 PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVS---DSFVETALTDMYCKCGEIDSA 573
Query: 489 FNIIEGLGVDLSLSVWGPLLAGCNVHGNAD 518
+ + + + +W ++ G +G D
Sbjct: 574 RQFFDAV-LRKNTVIWNEMIHGYGHNGRGD 602
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 198/496 (39%), Gaps = 133/496 (26%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
D L++ Y++ + A ++F EM R+V SWN + + G +A ++F M
Sbjct: 39 SDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGM 98
Query: 166 PERNVVSWN--------------------------------TIIKALSECGRIEDAQWHF 193
PER+VVSWN T+ LS C ++ D +
Sbjct: 99 PERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVF-- 156
Query: 194 NQMRERDVKSWTTMVDGLAINGR-----------VDDARELFDRMPVRNVVSWNVMIKGY 242
MR V T + + + VD +F+ + N VS+ +I G
Sbjct: 157 -GMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGL 215
Query: 243 AKNRRLDEALELFERMPER----------------------------------------- 261
A+ ++ EA+++F M E+
Sbjct: 216 ARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLA 275
Query: 262 -------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
D+ N+L+ + +N D+N AE +F EMP+ NV++W M+ G+ Q S++++
Sbjct: 276 LRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSV 335
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
+ +++ D +PN T ++VLGAC
Sbjct: 336 EFLTRMR-DSGFQPNEVTCISVLGAC---------------------------------- 360
Query: 375 YSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
+ G++ RRIF + Q + +WN M++ Y+++ + +EAI+ F +MQ + +
Sbjct: 361 -FRSGDVETGRRIFSS--IPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEG 494
T +L++C+ +E G Q +++ I + L+ + +++ + I +
Sbjct: 418 TLSVILSSCARLRFLEGGKQIHGVVIRTE-ISKNSHIVSGLIAVYSECEKMEISECIFDD 476
Query: 495 LGVDLSLSVWGPLLAG 510
+L ++ W +++G
Sbjct: 477 CINELDIACWNSMISG 492
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/438 (23%), Positives = 191/438 (43%), Gaps = 68/438 (15%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV------VTWTAL 114
++ A +F MPE ++ W MI G+ G + K + M+D VT ++
Sbjct: 300 MNGAELIFAEMPEVNVVSWNIMIVGF---GQEYRSDKSVEFLTRMRDSGFQPNEVTCISV 356
Query: 115 VNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN 174
+ + +E R+F +P+ +V +WN M+ GY+ E+A+ FR+M +N+
Sbjct: 357 LGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDK 416
Query: 175 TIIKA-LSECGRIE----DAQWHFNQMRERDVKSWTTMVDGL-AING---RVDDARELFD 225
T + LS C R+ Q H +R ++ + +V GL A+ +++ + +FD
Sbjct: 417 TTLSVILSSCARLRFLEGGKQIHGVVIRT-EISKNSHIVSGLIAVYSECEKMEISECIFD 475
Query: 226 R-MPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM--PSWNTLVT----------- 271
+ ++ WN MI G+ N +AL LF RM + + P+ + T
Sbjct: 476 DCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSL 535
Query: 272 -------------GFIQN--------------GDLNRAEKLFHEMPQKNVITWTAMMTGY 304
G++ + G+++ A + F + +KN + W M+ GY
Sbjct: 536 LHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGY 595
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI---HQLISKTAF 361
+G +EA+ ++ K+ + KP+ TFV+VL ACS + G +I Q I
Sbjct: 596 GHNGRGDEAVGLYRKMISS-GEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEP 654
Query: 362 QESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLF 421
+ Y+ +++ + G L A ++ + + ++ W ++++ HG A +
Sbjct: 655 ELDHYI--CIVDCLGRAGRLEDAEKLAEATPYKSSSVL-WEILLSSCRVHGDVSLARRVA 711
Query: 422 NKMQELGFQANDVTYVEL 439
K+ L Q++ YV L
Sbjct: 712 EKLMRLDPQSS-AAYVLL 728
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 29/125 (23%)
Query: 349 GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR-------------- 394
G+ IH I + + TY+ + L+++Y +CG+ AR++FDE +R
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 395 ---------------QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
+RD++SWN MI+ G+ ++A+ ++ +M GF + T +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 440 LTACS 444
L+ACS
Sbjct: 145 LSACS 149
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 273/545 (50%), Gaps = 53/545 (9%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
DV TA V+ +VK N ++ A ++F MPER+ +WN M+ G+ ++G T+KA LFR M
Sbjct: 86 DVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMR 145
Query: 167 ERNVVSWNTIIKALSECGRIEDAQWHFNQMR--------ERDVKSWTTMVDGLAINGRVD 218
+ + + L + E + M + V T + G +D
Sbjct: 146 LNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLD 205
Query: 219 DARELFDRMPV--RNVVSWNVMIKGYAKNRRLDEALELFERM------------------ 258
A+ +F+ + R VVSWN M K Y+ +A L+ M
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAAS 265
Query: 259 ---PE------------------RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITW 297
PE +D+ + NT ++ + ++ D A LF M + ++W
Sbjct: 266 CQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSW 325
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
T M++GY + G +EAL +F+ + KP+ T ++++ C L G+ I
Sbjct: 326 TVMISGYAEKGDMDEALALFHAM-IKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARAD 384
Query: 358 KTAFQ-ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
+ ++ + +ALI+MYSKCG +H AR IFD ++ +++W MIA YA +G E
Sbjct: 385 IYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN--TPEKTVVTWTTMIAGYALNGIFLE 442
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
A+ LF+KM +L ++ N +T++ +L AC+H+G +E+G +YF + + +I DHY+C+V
Sbjct: 443 ALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMV 502
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAG 536
DL GR G+L+EA +I + +WG LL C +H N I + A+ + +EP+ A
Sbjct: 503 DLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLFNLEPQMAA 562
Query: 537 TYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSEL 596
Y ++N+YA+ G W A +R MK + +KK PG S ++V F VG+ H ++E+
Sbjct: 563 PYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVENEV 622
Query: 597 LGYLL 601
+ + L
Sbjct: 623 IYFTL 627
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 191/450 (42%), Gaps = 81/450 (18%)
Query: 129 RLFYEMPERNVRSWNTMI-DGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSEC 183
RL+ +V +WN I + RN E L LFR M E N ++ + KA C
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLL-LFREMKRGGFEPNNFTFPFVAKA---C 62
Query: 184 GRIEDA----QWHFNQMRE---RDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWN 236
R+ D H + ++ DV T VD VD A ++F+RMP R+ +WN
Sbjct: 63 ARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWN 122
Query: 237 VMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQN-------------------- 276
M+ G+ ++ D+A LF M ++ + V IQ+
Sbjct: 123 AMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRL 182
Query: 277 -------------------GDLNRAEKLFHEMPQ--KNVITWTAMMTGYVQHGLSEEALK 315
GDL+ A+ +F + + + V++W +M Y G + +A
Sbjct: 183 GVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFG 242
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
++ L KP+ TF+ + +C + L +G+ IH + ++ I+MY
Sbjct: 243 LYC-LMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMY 301
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
SK + AR +FD ++ R +SW MI+ YA G EA+ LF+ M + G + + VT
Sbjct: 302 SKSEDTCSARLLFD--IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVT 359
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC----------LVDLCGRAGRL 485
+ L++ C G +E G + I R D Y C L+D+ + G +
Sbjct: 360 LLSLISGCGKFGSLETG----------KWIDARADIYGCKRDNVMICNALIDMYSKCGSI 409
Query: 486 KEAFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
EA +I + + ++ W ++AG ++G
Sbjct: 410 HEARDIFDNTP-EKTVVTWTTMIAGYALNG 438
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 132/537 (24%), Positives = 221/537 (41%), Gaps = 124/537 (23%)
Query: 29 PFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIM 88
PF + T+++ +K CN+ +D A K+F+RMPERD W M++G+
Sbjct: 82 PFWSDVFVGTATVDMFVK-CNS----------VDYAAKVFERMPERDATTWNAMLSGFCQ 130
Query: 89 CGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR-------- 140
G +A LF + ++ + V ++ E++ +L M +R
Sbjct: 131 SGHTDKAFSLFR-EMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMP--ERNVVSWNTIIKALSECGRIEDAQWHFNQM-- 196
NT I Y + G + A +F + +R VVSWN++ KA S G DA + M
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLR 249
Query: 197 -------------------------------------RERDVKSWTTMVDGLAINGRVDD 219
++D+++ T + + +
Sbjct: 250 EEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCS 309
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM----PERDMPSWNTLVTG--- 272
AR LFD M R VSW VMI GYA+ +DEAL LF M + D+ + +L++G
Sbjct: 310 ARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGK 369
Query: 273 ---------------------------------FIQNGDLNRAEKLFHEMPQKNVITWTA 299
+ + G ++ A +F P+K V+TWT
Sbjct: 370 FGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
M+ GY +G+ EALK+F+K+ D KPN TF+ VL AC+ L +G + ++ +
Sbjct: 430 MIAGYALNGIFLEALKLFSKM-IDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ- 487
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS------WNGMIAAYAHHGY 413
Y +S ++ YS +L + +E L R++ + W ++ A H
Sbjct: 488 -----VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRN 542
Query: 414 GK----EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQ 466
K A +LFN ++ YVE+ + AG+ +G ++K R+I+
Sbjct: 543 VKIAEQAAESLFNLEPQMA-----APYVEMANIYAAAGM-WDGFARIRSIMKQRNIK 593
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 171/413 (41%), Gaps = 65/413 (15%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMP--ERDLHLWGTMINGYIMCGVIKEARKLF------- 99
NT IS + G +D A+ +F+ + +R + W +M Y + G +A L+
Sbjct: 192 NTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 100 ---------------DGPDAM----------------KDVVTWTALVNGYVKLNQIEEAE 128
P+ + +D+ ++ Y K A
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKALSECG 184
LF M R SW MI GYA G ++AL LF M + ++V+ ++I + G
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFG 371
Query: 185 RIEDAQW-----HFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMI 239
+E +W + +V ++D + G + +AR++FD P + VV+W MI
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMI 431
Query: 240 KGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQ----NGDLNRAEKLFHEMPQKNVI 295
GYA N EAL+LF +M + D + +Q +G L + + FH M Q I
Sbjct: 432 AGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNI 491
Query: 296 T-----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQ 350
+ ++ M+ + G EEAL++ + A KP+ G + +L AC + +
Sbjct: 492 SPGLDHYSCMVDLLGRKGKLEEALELIRNMSA----KPDAGIWGALLNACKIHRNVKIAE 547
Query: 351 QIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNG 403
Q + + Q + V + N+Y+ G RI +++QR++ + G
Sbjct: 548 QAAESLFNLEPQMAAPYVE-MANIYAAAGMWDGFARI--RSIMKQRNIKKYPG 597
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 147/340 (43%), Gaps = 52/340 (15%)
Query: 264 PSWNTLVTG------FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIF 317
P W+ + G F++ ++ A K+F MP+++ TW AM++G+ Q G +++A +F
Sbjct: 82 PFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLF 141
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
+++ + + P++ T +T++ + S L + +H + + V + I+ Y K
Sbjct: 142 REMRLNE-ITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGK 200
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
CG+L A+ +F+ R ++SWN M AY+ G +A L+ M F+ + T++
Sbjct: 201 CGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFI 260
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH-----------YACLVDLC------- 479
L +C + + +G +L+ + +I + D Y+ D C
Sbjct: 261 NLAASCQNPETLTQG-----RLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFD 315
Query: 480 -----------------GRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVHGNADI 519
G + EA + + G L L++GC G+ +
Sbjct: 316 IMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 520 GKLVAKK--ILKIEPENAGTYSLLSNMYASVGKWKEAANV 557
GK + + I + +N + L +MY+ G EA ++
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDI 415
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 167/559 (29%), Positives = 293/559 (52%), Gaps = 57/559 (10%)
Query: 98 LFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEK 157
L +G +D++ ++ +I A ++F E+P+R V +N+MI Y+R ++
Sbjct: 46 LLNGSSISRDLIASCG------RIGEISYARKVFDELPQRGVSVYNSMIVVYSRGKNPDE 99
Query: 158 ALDLFRRMPERNV----VSWNTIIKALSECGRIE--DAQW--HFNQMRERDVKSWTTMVD 209
L L+ +M + ++ IKA +E +A W + + DV +++++
Sbjct: 100 VLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLN 159
Query: 210 GLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTL 269
G++D+A LF +M R+V+ W M+ G+A+ + +A+E + M +
Sbjct: 160 LYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVV 219
Query: 270 VTGFIQ-NGDLNR--------------------------------------AEKLFHEMP 290
+ G +Q +GDL A ++F M
Sbjct: 220 MLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRMM 279
Query: 291 QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQ 350
K ++W ++++G+ Q+GL+ +A + ++Q+ +P+ T V VL ACS + L G+
Sbjct: 280 FKTAVSWGSLISGFAQNGLANKAFEAVVEMQS-LGFQPDLVTLVGVLVACSQVGSLKTGR 338
Query: 351 QIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAH 410
+H I K + +AL++MYSKCG L +R IF+ + ++DL+ WN MI+ Y
Sbjct: 339 LVHCYILKRHVLDRV-TATALMDMYSKCGALSSSREIFEH--VGRKDLVCWNTMISCYGI 395
Query: 411 HGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRED 470
HG G+E ++LF KM E + + T+ LL+A SH+GLVE+G +F ++ IQ E
Sbjct: 396 HGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEK 455
Query: 471 HYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKI 530
HY CL+DL RAGR++EA ++I +D +L +W LL+GC H N +G + A KIL++
Sbjct: 456 HYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIAANKILQL 515
Query: 531 EPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKS 590
P++ G +L+SN +A+ KWKE A VR M++ ++K PG S +EV ++ F++ D S
Sbjct: 516 NPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLS 575
Query: 591 HSQSELLGYLLLDLHTKMK 609
H + + +L +L T+++
Sbjct: 576 HHEHYHMLQVLRNLKTEIR 594
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 146/413 (35%), Positives = 231/413 (55%), Gaps = 41/413 (9%)
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP----------------- 259
++DA +LFD+MP RNV+SW MI Y+K + +ALEL M
Sbjct: 112 LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS 171
Query: 260 -------------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAM 300
E D+ + L+ F + G+ A +F EM + I W ++
Sbjct: 172 CNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSI 231
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
+ G+ Q+ S+ AL++F +++ T +VL AC+ LA L G Q H I K
Sbjct: 232 IGGFAQNSRSDVALELFKRMKR-AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK-- 288
Query: 361 FQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINL 420
+ + + +AL++MY KCG L A R+F++ +++RD+I+W+ MI+ A +GY +EA+ L
Sbjct: 289 YDQDLILNNALVDMYCKCGSLEDALRVFNQ--MKERDVITWSTMISGLAQNGYSQEALKL 346
Query: 421 FNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCG 480
F +M+ G + N +T V +L ACSHAGL+E+G YF + K I +HY C++DL G
Sbjct: 347 FERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLG 406
Query: 481 RAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSL 540
+AG+L +A ++ + + W LL C V N + + AKK++ ++PE+AGTY+L
Sbjct: 407 KAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTL 466
Query: 541 LSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQ 593
LSN+YA+ KW +R +M+D+G+KK+PGCSW+EV + F++GD SH Q
Sbjct: 467 LSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQ 519
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 195/413 (47%), Gaps = 62/413 (15%)
Query: 50 TSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA--------RKL-FD 100
+ +RLC + + A K D + L + I C + A R L F+
Sbjct: 31 SEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90
Query: 101 GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALD 160
G M +V L+N YVK N + +A +LF +MP+RNV SW TMI Y++ +KAL+
Sbjct: 91 GHRPMMFLVN--VLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALE 148
Query: 161 LFRRMPERNV-VSWNTIIKALSECGRIEDAQ-WHFNQMR---ERDVKSWTTMVDGLAING 215
L M NV + T L C + D + H ++ E DV + ++D A G
Sbjct: 149 LLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLG 208
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP---------------- 259
+DA +FD M + + WN +I G+A+N R D ALELF+RM
Sbjct: 209 EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLR 268
Query: 260 ---------------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWT 298
++D+ N LV + + G L A ++F++M +++VITW+
Sbjct: 269 ACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWS 328
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG----QQIHQ 354
M++G Q+G S+EALK+F ++++ KPN T V VL ACS L +G + + +
Sbjct: 329 TMISGLAQNGYSQEALKLFERMKSS-GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKK 387
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAA 407
L +E +I++ K G+L A ++ +E + + D ++W ++ A
Sbjct: 388 LYGIDPVREH---YGCMIDLLGKAGKLDDAVKLLNE-MECEPDAVTWRTLLGA 436
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 88/198 (44%), Gaps = 16/198 (8%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD---GPDAM 105
N + C+ G ++DA ++F++M ERD+ W TMI+G G +EA KLF+
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEM-------PERNVRSWNTMIDGYARNGQTEKA 158
+ +T ++ +E+ F M P R + MID + G+ + A
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVRE--HYGCMIDLLGKAGKLDDA 414
Query: 159 LDLFRRMP-ERNVVSWNTIIKALSECGRIEDAQWHFNQ---MRERDVKSWTTMVDGLAIN 214
+ L M E + V+W T++ A + A++ + + D ++T + + A +
Sbjct: 415 VKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANS 474
Query: 215 GRVDDARELFDRMPVRNV 232
+ D E+ RM R +
Sbjct: 475 QKWDSVEEIRTRMRDRGI 492
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 277/514 (53%), Gaps = 19/514 (3%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PERN 169
L+ K ++++A R+ + + +++ +I AL + R + +++
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQD 111
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPV 229
+I S+ G ++ A+ F++ R+R + W + L + G ++ L+ +M
Sbjct: 112 PFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNR 171
Query: 230 RNVVS----WNVMIKGYAKNR----RLDEALELFERMPERDMPS----WNTLVTGFIQNG 277
V S + ++K + L + E+ + R S TLV + + G
Sbjct: 172 IGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFG 231
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHA-LKPNTGTFVTV 336
++ A +F MP +NV++W+AM+ Y ++G + EAL+ F ++ + PN+ T V+V
Sbjct: 232 CVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSV 291
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR 396
L AC+ LA L +G+ IH I + V+SAL+ MY +CG+L + +R+FD + R
Sbjct: 292 LQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR--MHDR 349
Query: 397 DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYF 456
D++SWN +I++Y HGYGK+AI +F +M G VT+V +L ACSH GLVEEG + F
Sbjct: 350 DVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLF 409
Query: 457 DKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN 516
+ + ++ I+ + +HYAC+VDL GRA RL EA +++ + + VWG LL C +HGN
Sbjct: 410 ETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGN 469
Query: 517 ADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVE 576
++ + ++++ +EP+NAG Y LL+++YA W E V+ ++ +GL+K PG W+E
Sbjct: 470 VELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWME 529
Query: 577 VGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
V + FV D+ + E + L+ L MK+
Sbjct: 530 VRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKE 563
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 168/379 (44%), Gaps = 67/379 (17%)
Query: 37 STSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCG------ 90
S SS A N I LC+EG++ A ++ + + +I + CG
Sbjct: 38 SISSGAGAKISNNQLIQSLCKEGKLKQAIRVLSQESSPSQQTYELLI---LCCGHRSSLS 94
Query: 91 -VIKEARKLFD-GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDG 148
++ R + D G D +D T L+ Y L ++ A ++F + +R + WN +
Sbjct: 95 DALRVHRHILDNGSD--QDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRA 152
Query: 149 YARNGQTEKALDLFRRM----PERNVVSWNTIIKAL--SECG---RIEDAQWHFNQMR-- 197
G E+ L L+ +M E + ++ ++KA SEC ++ + H + R
Sbjct: 153 LTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRG 212
Query: 198 -ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFE 256
V TT+VD A G VD A +F MPVRNVVSW+ MI YAKN + EAL F
Sbjct: 213 YSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFR 272
Query: 257 RMPERD-----------------------------------------MPSWNTLVTGFIQ 275
M +P + LVT + +
Sbjct: 273 EMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGR 332
Query: 276 NGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVT 335
G L +++F M ++V++W ++++ Y HG ++A++IF ++ A+ A P TFV+
Sbjct: 333 CGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA-SPTPVTFVS 391
Query: 336 VLGACSDLAGLNEGQQIHQ 354
VLGACS + EG+++ +
Sbjct: 392 VLGACSHEGLVEEGKRLFE 410
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 141/348 (40%), Gaps = 79/348 (22%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DGPDAMKDVVTW-- 111
G +D ARK+FD+ +R +++W + + G +E L+ G ++ + T+
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 112 -----------------------------------TALVNGYVKLNQIEEAERLFYEMPE 136
T LV+ Y + ++ A +F MP
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSECGRIEDAQ 190
RNV SW+ MI YA+NG+ +AL FR M N V+ ++++A + +E +
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 191 WHFNQMRERDVKSWTTMVDGLAI----NGRVDDARELFDRMPVRNVVSWNVMIKGYAKNR 246
+ R + S ++ L G+++ + +FDRM R+VVSWN +I Y +
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 247 RLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQ 306
+A+++FE M + NG +T+ +++
Sbjct: 366 YGKKAIQIFEEM---------------LANG------------ASPTPVTFVSVLGACSH 398
Query: 307 HGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
GL EE ++F + DH +KP + ++ L+E ++ Q
Sbjct: 399 EGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQ 446
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 178/591 (30%), Positives = 303/591 (51%), Gaps = 29/591 (4%)
Query: 27 GYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGR-IDDARKLFDRM----PERDLHLWGT 81
+ FL+ M + S+ S C + C+E R + R L DRM + L
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQC---LFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNC 123
Query: 82 MINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS 141
++ Y C +++A KLFD + + V+ T +++ Y + +++A LF M +
Sbjct: 124 VLQMYCECRSLEDADKLFDEMSEL-NAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 142 WNTMIDGYARNGQTEKALDLFRRMPE---RNVVSWNT-----IIKALSECGRIEDAQWHF 193
++M ++ +ALD R++ R + NT I+ +CG + A+ F
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVF 242
Query: 194 NQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWN-----VMIKGYAKNRRL 248
+QM + + T ++ G GR DA +LF + V V W+ V++K A L
Sbjct: 243 DQMAVKKPVACTGLMVGYTQAGRARDALKLFVDL-VTEGVEWDSFVFSVVLKACASLEEL 301
Query: 249 DEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGY 304
+ ++ + E ++ LV +I+ A + F E+ + N ++W+A+++GY
Sbjct: 302 NLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGY 361
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQES 364
Q EEA+K F L++ +A N+ T+ ++ ACS LA N G Q+H K + S
Sbjct: 362 CQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGS 421
Query: 365 TYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM 424
Y SALI MYSKCG L A +F+ + D+++W I+ +A++G EA+ LF KM
Sbjct: 422 QYGESALITMYSKCGCLDDANEVFES--MDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 425 QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGR 484
G + N VT++ +LTACSHAGLVE+G D +L+ ++ DHY C++D+ R+G
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 485 LKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNM 544
L EA ++ + + W L+GC H N ++G++ +++ +++PE+ Y L N+
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599
Query: 545 YASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
Y GKW+EAA + M ++ LKK+ CSW++ + F+VGDK H Q++
Sbjct: 600 YTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQ 650
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/477 (33%), Positives = 253/477 (53%), Gaps = 40/477 (8%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKAL-SECGR 185
A R+ + RN W +I GYA G+ ++A+ ++ M + + + AL CG
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 186 IEDA----QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKG 241
++D Q+H R R G V N MI
Sbjct: 162 MKDLNLGRQFHAQTFRLR----------GFCF------------------VYVGNTMIDM 193
Query: 242 YAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMM 301
Y K +D A ++F+ MPERD+ SW L+ + + G++ A +LF +P K+++ WTAM+
Sbjct: 194 YVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMV 253
Query: 302 TGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAF 361
TG+ Q+ +EAL+ F++++ ++ + T + AC+ L + Q+ K+ +
Sbjct: 254 TGFAQNAKPQEALEYFDRMEKS-GIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGY 312
Query: 362 QESTYVV--SALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAIN 419
S +VV SALI+MYSKCG + A +F + +++ +++ MI A HG +EA++
Sbjct: 313 SPSDHVVIGSALIDMYSKCGNVEEAVNVFMS--MNNKNVFTYSSMILGLATHGRAQEALH 370
Query: 420 LFNKM-QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL 478
LF+ M + + N VT+V L ACSH+GLV++G Q FD + + +Q DHY C+VDL
Sbjct: 371 LFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDL 430
Query: 479 CGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTY 538
GR GRL+EA +I+ + V+ VWG LL C +H N +I ++ A+ + ++EP+ G Y
Sbjct: 431 LGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNY 490
Query: 539 SLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGN-TVQVFVVGDKSHSQS 594
LLSN+YAS G W VR +K+KGLKK P SWV N + F G+ +H S
Sbjct: 491 ILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMS 547
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 166/340 (48%), Gaps = 20/340 (5%)
Query: 64 ARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDVVTWTALVNGYVK 120
AR++ + + R+ LW +I GY + G EA ++ + T++AL+
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 121 LNQIEEAERLFYEMPER-----NVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNT 175
+ + R F+ R V NTMID Y + + A +F MPER+V+SW
Sbjct: 162 MKDLNLG-RQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTE 220
Query: 176 IIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSW 235
+I A + G +E A F + +D+ +WT MV G A N + +A E FDRM + +
Sbjct: 221 LIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRAD 280
Query: 236 NVMIKGY-------AKNRRLDEALELFER---MPERDMPSWNTLVTGFIQNGDLNRAEKL 285
V + GY ++ D A+++ ++ P + + L+ + + G++ A +
Sbjct: 281 EVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 286 FHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAG 345
F M KNV T+++M+ G HG ++EAL +F+ + +KPNT TFV L ACS
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGL 400
Query: 346 LNEGQQIHQLISKT-AFQESTYVVSALINMYSKCGELHIA 384
+++G+Q+ + +T Q + + ++++ + G L A
Sbjct: 401 VDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEA 440
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 179/374 (47%), Gaps = 56/374 (14%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
NT I + ID ARK+FD MPERD+ W +I Y G ++ A +LF+ KD+
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPT-KDM 246
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGY----ARNGQT---EKALDL 161
V WTA+V G+ + + +EA F M + +R+ + GY A+ G + ++A+ +
Sbjct: 247 VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQI 306
Query: 162 FRR---MPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVD 218
++ P +VV + +I S+CG +E+A F M ++V ++++M+ GLA +GR
Sbjct: 307 AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQ 366
Query: 219 DARELFDRMPVR-----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGF 273
+A LF M + N V++ + + + +D+ ++F+ M
Sbjct: 367 EALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSM--------------- 411
Query: 274 IQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
+ F P ++ +T M+ + G +EAL++ + +++P+ G +
Sbjct: 412 ---------YQTFGVQPTRD--HYTCMVDLLGRTGRLQEALELIKTM----SVEPHGGVW 456
Query: 334 VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI---NMYSKCGE---LHIARRI 387
+LGAC ++ +I ++ ++ F+ ++ I N+Y+ G+ + R++
Sbjct: 457 GALLGACR----IHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKL 512
Query: 388 FDEGLLRQRDLISW 401
E L++ +SW
Sbjct: 513 IKEKGLKKTPAVSW 526
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 280 bits (717), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/516 (29%), Positives = 272/516 (52%), Gaps = 52/516 (10%)
Query: 142 WNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKALSECG-RIEDAQWHFNQM 196
WN + A +++ L+R M + S+ I+K+ + + Q H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 197 R---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVS--WNVMIKGYAKNRRLDEA 251
+ E + T ++ G V DAR++F+ P + +S +N +I GY N ++ +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 252 LELFERMPER----------------DMPSW-----------------------NTLVTG 272
+F RM E +P + N+ +T
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+++ G + +LF EMP K +ITW A+++GY Q+GL+ + L+++ ++++ + P+ T
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS-GVCPDPFT 259
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
V+VL +C+ L G ++ +L+ F + +V +A I+MY++CG L AR +FD +
Sbjct: 260 LVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFD--I 317
Query: 393 LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
+ + L+SW MI Y HG G+ + LF+ M + G + + +V +L+ACSH+GL ++G
Sbjct: 318 MPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKG 377
Query: 453 LQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN 512
L+ F + + ++ +HY+CLVDL GRAGRL EA IE + V+ +VWG LL C
Sbjct: 378 LELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACK 437
Query: 513 VHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 572
+H N D+ +L K+++ EP N G Y L+SN+Y+ + +R+ M+++ +K+PG
Sbjct: 438 IHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGY 497
Query: 573 SWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKM 608
S+VE V +F+ GD+SH Q+E + +L +L T +
Sbjct: 498 SYVEHKGRVHLFLAGDRSHEQTEEVHRMLDELETSV 533
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 181/408 (44%), Gaps = 60/408 (14%)
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRS--WNTMIDGYARNGQTEKALDLFRRMPERN 169
TAL++ Y K + +A ++F E P+ + S +N +I GY N + A +FRRM E
Sbjct: 92 TALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETG 151
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMRERDVK-----------SWTTMVDGLAINGRVD 218
V + + L + + W + + VK S+ TM G V+
Sbjct: 152 VSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKC---GSVE 208
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNTLVT------ 271
R LFD MPV+ +++WN +I GY++N + LEL+E+M + P TLV+
Sbjct: 209 AGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCA 268
Query: 272 ------------------GFIQN--------------GDLNRAEKLFHEMPQKNVITWTA 299
GF+ N G+L +A +F MP K++++WTA
Sbjct: 269 HLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTA 328
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
M+ Y HG+ E L +F+ + ++P+ FV VL ACS ++G ++ + + +
Sbjct: 329 MIGCYGMHGMGEIGLMLFDDM-IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKRE 387
Query: 360 -AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAI 418
+ S L+++ + G L A F E + + D W ++ A H A
Sbjct: 388 YKLEPGPEHYSCLVDLLGRAGRLDEAME-FIESMPVEPDGAVWGALLGACKIHKNVDMAE 446
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQ 466
F K+ E F+ N++ Y L++ +EG+ +++ R+ +
Sbjct: 447 LAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFR 492
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 141/318 (44%), Gaps = 32/318 (10%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKE----ARKLFD---- 100
N IS ++ DA +F RM E + + + G + + E R L
Sbjct: 125 NALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVK 184
Query: 101 -GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKAL 159
G D+ +V + + Y+K +E RLF EMP + + +WN +I GY++NG L
Sbjct: 185 GGLDS--EVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVL 242
Query: 160 DLFRRMPERNVVS-WNTIIKALSECGRI--EDAQWHFNQMRERDVKSWTTMVDGLAIN-- 214
+L+ +M V T++ LS C + + ++ E + V +I+
Sbjct: 243 ELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
Query: 215 ---GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWN 267
G + AR +FD MPV+++VSW MI Y + + L LF+ M +R D +
Sbjct: 303 ARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFV 362
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQKNVIT-----WTAMMTGYVQHGLSEEALKIFNKLQA 322
+++ +G ++ +LF M ++ + ++ ++ + G +EA++ +
Sbjct: 363 MVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESM-- 420
Query: 323 DHALKPNTGTFVTVLGAC 340
++P+ + +LGAC
Sbjct: 421 --PVEPDGAVWGALLGAC 436
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 136/314 (43%), Gaps = 27/314 (8%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD 100
L S + N+ I+ + G ++ R+LFD MP + L W +I+GY G+ + +L++
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 101 ---GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE--------RNVRSWNTMIDGY 149
D T ++++ L A+++ +E+ + NV N I Y
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLG----AKKIGHEVGKLVESNGFVPNVFVSNASISMY 302
Query: 150 ARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKS----WT 205
AR G KA +F MP +++VSW +I G E F+ M +R ++ +
Sbjct: 303 ARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFV 362
Query: 206 TMVDGLAINGRVDDARELFDRMPVRNVVS-----WNVMIKGYAKNRRLDEALELFERMP- 259
++ + +G D ELF M + ++ ++ + RLDEA+E E MP
Sbjct: 363 MVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPV 422
Query: 260 ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP--QKNVITWTAMMTGYVQHGLSEEALKIF 317
E D W L+ + +++ AE F ++ + N I + +M+ ++E +
Sbjct: 423 EPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRI 482
Query: 318 NKLQADHALKPNTG 331
+ + A + G
Sbjct: 483 RVMMRERAFRKKPG 496
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 267/475 (56%), Gaps = 22/475 (4%)
Query: 143 NTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQM-RERDV 201
N+++ YA G+ E +F MP+R+VVSWN +I + GR EDA F +M +E ++
Sbjct: 85 NSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNL 144
Query: 202 K----------SWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEA 251
K S + + L I R+ M VR N ++ + K LD+A
Sbjct: 145 KFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR---IGNALVDMFCKCGCLDKA 201
Query: 252 LELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSE 311
+F+ M ++++ W ++V G++ G ++ A LF P K+V+ WTAMM GYVQ +
Sbjct: 202 RAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFD 261
Query: 312 EALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
EAL++F +Q ++P+ V++L C+ L +G+ IH I++ V +AL
Sbjct: 262 EALELFRCMQT-AGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTAL 320
Query: 372 INMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
++MY+KCG + A +F E +++RD SW +I A +G A++L+ +M+ +G +
Sbjct: 321 VDMYAKCGCIETALEVFYE--IKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRL 378
Query: 432 NDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNI 491
+ +T+V +LTAC+H G V EG + F + + ++Q + +H +CL+DL RAG L EA +
Sbjct: 379 DAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEEL 438
Query: 492 IE---GLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASV 548
I+ G + + V+ LL+ +GN I + VA+K+ K+E ++ ++LL+++YAS
Sbjct: 439 IDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASA 498
Query: 549 GKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDK--SHSQSELLGYLL 601
+W++ NVR KMKD G++K PGCS +E+ F+VGD SH + + + +L
Sbjct: 499 NRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSML 553
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 174/363 (47%), Gaps = 80/363 (22%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
D +L+ Y L +IE ++F EMP+R+V SWN +I Y NG+ E A+ +F+RM
Sbjct: 80 DSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMS 139
Query: 167 ERNVVSWN--TIIKALS-------------------------------------ECGRIE 187
+ + + ++ TI+ LS +CG ++
Sbjct: 140 QESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGNALVDMFCKCGCLD 199
Query: 188 DAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRR 247
A+ F+ MR+++VK WT+MV G GR+D+AR LF+R PV++VV W M+ GY + R
Sbjct: 200 KARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNR 259
Query: 248 LDEALELFERMPERDMPSWN----TLVTGFIQNGDLNR---------------------- 281
DEALELF M + N +L+TG Q G L +
Sbjct: 260 FDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTA 319
Query: 282 -------------AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
A ++F+E+ +++ +WT+++ G +G+S AL ++ +++ + ++
Sbjct: 320 LVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEME-NVGVRL 378
Query: 329 NTGTFVTVLGACSDLAGLNEGQQI-HQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
+ TFV VL AC+ + EG++I H + + Q + S LI++ + G L A +
Sbjct: 379 DAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEEL 438
Query: 388 FDE 390
D+
Sbjct: 439 IDK 441
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 203/465 (43%), Gaps = 66/465 (14%)
Query: 18 KTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLH 77
K H + G F +S S +++++ G+I+ K+FD MP+RD+
Sbjct: 67 KVHGYAVKAGLEFDSYVSNSLMGMYASL-------------GKIEITHKVFDEMPQRDVV 113
Query: 78 LWGTMINGYIMCGVIKEA----RKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYE 133
W +I+ Y+ G ++A +++ + D T + ++ L +E ER++
Sbjct: 114 SWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRF 173
Query: 134 MP---ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQ 190
+ E +VR N ++D + + G +KA +F M ++NV W +++ GRI++A+
Sbjct: 174 VVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEAR 233
Query: 191 WHFNQMRERDVKSWTTMVDGLAINGRVDDARELF-------------------------- 224
F + +DV WT M++G R D+A ELF
Sbjct: 234 VLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTG 293
Query: 225 --------------DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLV 270
+R+ V VV ++ YAK ++ ALE+F + ERD SW +L+
Sbjct: 294 ALEQGKWIHGYINENRVTVDKVVG-TALVDMYAKCGCIETALEVFYEIKERDTASWTSLI 352
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
G NG RA L++EM V IT+ A++T G E KIF+ + H +
Sbjct: 353 YGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNV 412
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
+P + ++ L+E +++ + + + V +L++ G + IA R
Sbjct: 413 QPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAER 472
Query: 387 IFDE-GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
+ ++ + D + + + YA ++ N+ KM++LG +
Sbjct: 473 VAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIR 517
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 156/309 (50%), Gaps = 24/309 (7%)
Query: 312 EALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
+ L +F +L+ L P+ T VL + L + EG+++H K + +YV ++L
Sbjct: 29 KVLALFGELRG-QGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSL 87
Query: 372 INMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM-QELGFQ 430
+ MY+ G++ I ++FDE + QRD++SWNG+I++Y +G ++AI +F +M QE +
Sbjct: 88 MGMYASLGKIEITHKVFDE--MPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLK 145
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFN 490
++ T V L+ACS +E G + + ++ + VR + LVD+ + G L +A
Sbjct: 146 FDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVRIGN--ALVDMFCKCGCLDKARA 203
Query: 491 IIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP-ENAGTYSLLSNMYASVG 549
+ + + D ++ W ++ G G D +++ ++ P ++ ++ + N Y
Sbjct: 204 VFDSMR-DKNVKCWTSMVFGYVSTGRIDEARVLFER----SPVKDVVLWTAMMNGYVQFN 258
Query: 550 KWKEAANVRMKMKDKGLKKQ--------PGCSW---VEVGNTVQVFVVGDKSHSQSELLG 598
++ EA + M+ G++ GC+ +E G + + + + + +++G
Sbjct: 259 RFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGY-INENRVTVDKVVG 317
Query: 599 YLLLDLHTK 607
L+D++ K
Sbjct: 318 TALVDMYAK 326
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 279 bits (714), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 171/524 (32%), Positives = 276/524 (52%), Gaps = 55/524 (10%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMP--ERNVRSWNTMIDGYARNGQT--EKALDLF 162
+VV ++L N Y++ N+++ A F +P +RN SWNT++ GY+++ L L+
Sbjct: 38 EVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLY 97
Query: 163 RRMPER--NVVSWNTI--IKALSECGRIEDAQW-HFNQMR---ERDVKSWTTMVDGLAIN 214
RM V S+N + IKA G +E+ H M+ ++D ++V+ A
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 215 GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLV 270
G ++ A+++FD +PVRN V W V++KGY K + E LF M + D + LV
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLV 217
Query: 271 TG---------------------FIQNGD---------------LNRAEKLFHEMPQKNV 294
FI D L+ A KLF +NV
Sbjct: 218 KACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNV 277
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
+ WT +++G+ + + EA +F ++ + L PN T +L +CS L L G+ +H
Sbjct: 278 VMWTTLISGFAKCERAVEAFDLFRQMLRESIL-PNQCTLAAILVSCSSLGSLRHGKSVHG 336
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
+ + + ++ I+MY++CG + +AR +FD ++ +R++ISW+ MI A+ +G
Sbjct: 337 YMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFD--MMPERNVISWSSMINAFGINGLF 394
Query: 415 KEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC 474
+EA++ F+KM+ N VT+V LL+ACSH+G V+EG + F+ + ++ + E+HYAC
Sbjct: 395 EEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYAC 454
Query: 475 LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPEN 534
+VDL GRAG + EA + I+ + V S WG LL+ C +H D+ +A+K+L +EPE
Sbjct: 455 MVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEK 514
Query: 535 AGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVG 578
+ Y LLSN+YA G W+ VR KM KG +K G S EVG
Sbjct: 515 SSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/485 (23%), Positives = 205/485 (42%), Gaps = 94/485 (19%)
Query: 57 QEGRIDDARKLFDRMP--ERDLHLWGTMINGY----IMCG-----VIKEARKLFDGPDAM 105
Q R+D A F+R+P +R+ H W T+++GY C + R+ DG D+
Sbjct: 51 QSNRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSF 110
Query: 106 -------------------------------KDVVTWTALVNGYVKLNQIEEAERLFYEM 134
KD +LV Y +L +E A+++F E+
Sbjct: 111 NLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEI 170
Query: 135 PERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSECGRIEDAQ--- 190
P RN W ++ GY + + + LF M + + + T+I + CG + +
Sbjct: 171 PVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGK 230
Query: 191 -WHFNQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKN 245
H +R + +++D +D+AR+LF+ RNVV W +I G+AK
Sbjct: 231 CVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKC 290
Query: 246 RRLDEALELFERM---------------------------------------PERDMPSW 266
R EA +LF +M E D ++
Sbjct: 291 ERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNF 350
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
+ + + + G++ A +F MP++NVI+W++M+ + +GL EEAL F+K+++ + +
Sbjct: 351 TSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVV 410
Query: 327 KPNTGTFVTVLGACSDLAGLNEG-QQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
PN+ TFV++L ACS + EG +Q + + ++++ + GE+ A+
Sbjct: 411 -PNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAK 469
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
D ++ +W +++A H A + K+ + + + V YV L +
Sbjct: 470 SFIDNMPVKPMA-SAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV-YVLLSNIYAD 527
Query: 446 AGLVE 450
AG+ E
Sbjct: 528 AGMWE 532
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 79/169 (46%), Gaps = 8/169 (4%)
Query: 346 LNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMI 405
LN QQ+H + F++ + S+L N Y + L A F+ +R+ SWN ++
Sbjct: 20 LNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTIL 79
Query: 406 AAYAHHGYG--KEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR 463
+ Y+ + + L+N+M+ + V + AC GL+E G+ +KN
Sbjct: 80 SGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKN- 138
Query: 464 SIQVREDHYAC--LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
+ +D Y LV++ + G ++ A + + + V S+ +WG L+ G
Sbjct: 139 --GLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSV-LWGVLMKG 184
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 278 bits (712), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 155/499 (31%), Positives = 253/499 (50%), Gaps = 43/499 (8%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
DV ++ Y K + IE A ++F EM ER+V SWN+MI GY+++G E +++ M
Sbjct: 165 SDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAM 224
Query: 166 PERNVVSWN--TIIKALSECGRIEDAQWHFNQMR-------ERDVKSWTTMVDGLAINGR 216
+ N T+I CG+ D + + + D+ ++ A G
Sbjct: 225 LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGS 284
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQN 276
+D AR LFD M ++ V++ +I GY + + EA+ LF M + +WN +++G +QN
Sbjct: 285 LDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQN 344
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
F EM + +PNT T ++
Sbjct: 345 NHHEEVINSFREMIRCGS--------------------------------RPNTVTLSSL 372
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR 396
L + + + L G++IH + + YV +++I+ Y+K G L A+R+FD + R
Sbjct: 373 LPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDN--CKDR 430
Query: 397 DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYF 456
LI+W +I AYA HG A +LF++MQ LG + +DVT +L+A +H+G + F
Sbjct: 431 SLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIF 490
Query: 457 DKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN 516
D +L I+ +HYAC+V + RAG+L +A I + +D VWG LL G +V G+
Sbjct: 491 DSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGD 550
Query: 517 ADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVE 576
+I + ++ ++EPEN G Y++++N+Y G+W+EA VR KMK GLKK PG SW+E
Sbjct: 551 LEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIE 610
Query: 577 VGNTVQVFVVGDKSHSQSE 595
++ F+ D S +S+
Sbjct: 611 TEKGLRSFIAKDSSCERSK 629
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 215/504 (42%), Gaps = 93/504 (18%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG------- 101
N I+ + I+ ARK+FD M ERD+ W +MI+GY G ++ +K++
Sbjct: 171 NGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDF 230
Query: 102 -PDAMK-------------------------------DVVTWTALVNGYVKLNQIEEAER 129
P+ + D+ A++ Y K ++ A
Sbjct: 231 KPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARA 290
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDA 189
LF EM E++ ++ +I GY +G ++A+ LF M + +WN +I L + E+
Sbjct: 291 LFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEV 350
Query: 190 QWHFNQM----RERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV-----MIK 240
F +M + + ++++ L + + +E+ +RN N+ +I
Sbjct: 351 INSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEI-HAFAIRNGADNNIYVTTSIID 409
Query: 241 GYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEM----PQKNVIT 296
YAK L A +F+ +R + +W ++T + +GD + A LF +M + + +T
Sbjct: 410 NYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVT 469
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
TA+++ + G S+ A IF+ + + ++P + ++ S L++ + I
Sbjct: 470 LTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM---EFI 526
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIAR----RIFDEGLLRQRDLISWNGMIAAYAHHG 412
SK V AL+N S G+L IAR R+F+ + + ++ M Y G
Sbjct: 527 SKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFE---MEPENTGNYTIMANLYTQAG 583
Query: 413 YGKEAINLFNKMQELGFQA-NDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH 471
+EA + NKM+ +G + +++E E+GL+ F + K+ S +
Sbjct: 584 RWEEAEMVRNKMKRIGLKKIPGTSWIE----------TEKGLRSF--IAKDSSCE----- 626
Query: 472 YACLVDLCGRAGRLKEAFNIIEGL 495
R KE + IIEGL
Sbjct: 627 ------------RSKEMYEIIEGL 638
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 147/327 (44%), Gaps = 55/327 (16%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKD 107
CN I + G +D AR LFD M E+D +G +I+GY+ G++KEA LF +++
Sbjct: 272 CNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIG- 330
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEM--------------------------------- 134
+ TW A+++G ++ N EE F EM
Sbjct: 331 LSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHA 390
Query: 135 ------PERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIED 188
+ N+ ++ID YA+ G A +F +R++++W II A + G +
Sbjct: 391 FAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDS 450
Query: 189 AQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-----NVVSWNVMI 239
A F+QM+ + D + T ++ A +G D A+ +FD M + V + M+
Sbjct: 451 ACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMV 510
Query: 240 KGYAKNRRLDEALELFERMPERDMPS-WNTLVTGFIQNGDLNRA----EKLFHEMPQKNV 294
++ +L +A+E +MP + W L+ G GDL A ++LF EM +N
Sbjct: 511 SVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLF-EMEPENT 569
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQ 321
+T M Y Q G EEA + NK++
Sbjct: 570 GNYTIMANLYTQAGRWEEAEMVRNKMK 596
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 142/297 (47%), Gaps = 21/297 (7%)
Query: 234 SWNVMIKGYAKNRRLDEALELFERM------PERDMPSWNTLVTGFIQNGDLNRAEKLFH 287
++ +I+ + ++R L+L R+ P+ + S L++ + + +A +F
Sbjct: 24 AYGHLIQHFTRHRLPLHVLQLHARIVVFSIKPDNFLAS--KLISFYTRQDRFRQALHVFD 81
Query: 288 EMPQKNVITWTAMMTGYVQHGLSEEALKIF-----NKLQADHALKPNTGTFVTVLGA--- 339
E+ +N ++ A++ Y + +A +F + + A +P++ + VL A
Sbjct: 82 EITVRNAFSYNALLIAYTSREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSG 141
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
C D + +Q+H + + F +V + +I Y+KC + AR++FDE + +RD++
Sbjct: 142 CDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDE--MSERDVV 199
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVEEGLQYFDK 458
SWN MI+ Y+ G ++ ++ M F+ N VT + + AC + + GL+ K
Sbjct: 200 SWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKK 259
Query: 459 LLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
+++N IQ+ ++ + G L A + + + S++ +G +++G HG
Sbjct: 260 MIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVT-YGAIISGYMAHG 314
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 279/557 (50%), Gaps = 76/557 (13%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV-- 171
L+N Y KL+ E A + P RNV SW ++I G A+NG AL F M VV
Sbjct: 48 LINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPN 107
Query: 172 --SWNTIIKALS----------------ECGRIEDAQWHFNQMRERDVKSWTTMVDGLAI 213
++ KA++ +CGRI D F D+ T + D
Sbjct: 108 DFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDV---FVGCSAFDMYCKTRLRD---- 160
Query: 214 NGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELF------ERMP-------- 259
DAR+LFD +P RN+ +WN I + R EA+E F + P
Sbjct: 161 -----DARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAF 215
Query: 260 -------------------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV 294
+ D+ N L+ + + + +E +F EM KN
Sbjct: 216 LNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNA 275
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
++W +++ YVQ+ E+A ++ + + D ++ + +VL AC+ +AGL G+ IH
Sbjct: 276 VSWCSLVAAYVQNHEDEKASVLYLRSRKD-IVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
K + + +V SAL++MY KCG + + + FDE + +++L++ N +I YAH G
Sbjct: 335 HAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE--MPEKNLVTRNSLIGGYAHQGQV 392
Query: 415 KEAINLFNKM--QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
A+ LF +M + G N +T+V LL+ACS AG VE G++ FD + I+ +HY
Sbjct: 393 DMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY 452
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP 532
+C+VD+ GRAG ++ A+ I+ + + ++SVWG L C +HG +G L A+ + K++P
Sbjct: 453 SCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDP 512
Query: 533 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHS 592
+++G + LLSN +A+ G+W EA VR ++K G+KK G SW+ V N V F D+SH
Sbjct: 513 KDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHI 572
Query: 593 QSELLGYLLLDLHTKMK 609
++ + L L +M+
Sbjct: 573 LNKEIQTTLAKLRNEME 589
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 161/367 (43%), Gaps = 80/367 (21%)
Query: 56 CQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF------DG-PDAM--- 105
C+ DDARKLFD +PER+L W I+ + G +EA + F DG P+++
Sbjct: 154 CKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFC 213
Query: 106 ----------------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPER 137
DV L++ Y K QI +E +F EM +
Sbjct: 214 AFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK 273
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKA-LSECGRIEDAQW----H 192
N SW +++ Y +N + EKA L+ R + V + + +I + LS C + + H
Sbjct: 274 NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIH 333
Query: 193 FNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLD 249
+ ++ ER + + +VD G ++D+ + FD MP +N+V+ N +I GYA ++D
Sbjct: 334 AHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVD 393
Query: 250 EALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGL 309
AL LFE M R P N +T+ ++++ + G
Sbjct: 394 MALALFEEMAPRGCG-------------------------PTPNYMTFVSLLSACSRAGA 428
Query: 310 SEEALKIFNKLQADHALKPNT---GTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTY 366
E +KIF+ +++ + ++P V +LG AG+ E + ++ I K Q +
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGR----AGMVE--RAYEFIKKMPIQPTIS 482
Query: 367 VVSALIN 373
V AL N
Sbjct: 483 VWGALQN 489
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 148/355 (41%), Gaps = 50/355 (14%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL---FR 163
DV + + Y K ++A +LF E+PERN+ +WN I +G+ +A++ FR
Sbjct: 142 DVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFR 201
Query: 164 RMP-ERNVVSWNTIIKALSECGRIE-DAQWHFNQMR---ERDVKSWTTMVDGLAINGRVD 218
R+ N +++ + A S+ + Q H +R + DV ++D ++
Sbjct: 202 RIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIR 261
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFER--------------------- 257
+ +F M +N VSW ++ Y +N ++A L+ R
Sbjct: 262 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 321
Query: 258 ------------------MPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTA 299
ER + + LV + + G + +E+ F EMP+KN++T +
Sbjct: 322 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNS 381
Query: 300 MMTGYVQHGLSEEALKIFNKLQA-DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
++ GY G + AL +F ++ PN TFV++L ACS + G +I +
Sbjct: 382 LIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRS 441
Query: 359 T-AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
T + S +++M + G + A F + + Q + W + A HG
Sbjct: 442 TYGIEPGAEHYSCIVDMLGRAGMVERAYE-FIKKMPIQPTISVWGALQNACRMHG 495
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/549 (29%), Positives = 288/549 (52%), Gaps = 54/549 (9%)
Query: 112 TALVNGYVK----LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
T LVN +K Q + + LF N+ +N++I+G+ N + LDLF + +
Sbjct: 45 TFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRK 104
Query: 168 RNV-VSWNTIIKALSECGRIEDAQWHFNQMR-------ERDVKSWTTMVDGLAINGRVDD 219
+ + T L C R + + DV + T+++ + +GR++D
Sbjct: 105 HGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLND 164
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER------------------ 261
A +LFD +P R+VV+W + GY + R EA++LF++M E
Sbjct: 165 AHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVH 224
Query: 262 ----DMPSW-----------------NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAM 300
D W TLV + + G + +A +F M +K+++TW+ M
Sbjct: 225 VGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTM 284
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
+ GY + +E +++F ++ ++ LKP+ + V L +C+ L L+ G+ LI +
Sbjct: 285 IQGYASNSFPKEGIELFLQMLQEN-LKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE 343
Query: 361 FQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINL 420
F + ++ +ALI+MY+KCG + +F E ++++D++ N I+ A +G+ K + +
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFKE--MKEKDIVIMNAAISGLAKNGHVKLSFAV 401
Query: 421 FNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCG 480
F + ++LG + T++ LL C HAGL+++GL++F+ + +++ +HY C+VDL G
Sbjct: 402 FGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWG 461
Query: 481 RAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSL 540
RAG L +A+ +I + + + VWG LL+GC + + + + V K+++ +EP NAG Y
Sbjct: 462 RAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQ 521
Query: 541 LSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYL 600
LSN+Y+ G+W EAA VR M KG+KK PG SW+E+ V F+ DKSH S+ +
Sbjct: 522 LSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAK 581
Query: 601 LLDLHTKMK 609
L DL +M+
Sbjct: 582 LEDLGNEMR 590
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 34/334 (10%)
Query: 28 YPFLRTMSTSTSS------LHSAMKDC---------NTSISRLCQEGRIDDARKLFDRMP 72
+P + T SS LHS + C + +S GR++DA KLFD +P
Sbjct: 114 FPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIP 173
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAM---KDVVTWTALVNGYVKLNQIEEAER 129
+R + W + +GY G +EA LF M D +++ V + ++ E
Sbjct: 174 DRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEW 233
Query: 130 LFYEMPE----RNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGR 185
+ M E +N T+++ YA+ G+ EKA +F M E+++V+W+T+I+ +
Sbjct: 234 IVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSF 293
Query: 186 IEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDAR---ELFDRMP-VRNVVSWNV 237
++ F QM + ++K S + A G +D L DR + N+ N
Sbjct: 294 PKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANA 353
Query: 238 MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV--- 294
+I YAK + E+F+ M E+D+ N ++G +NG + + +F + + +
Sbjct: 354 LIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPD 413
Query: 295 -ITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
T+ ++ G V GL ++ L+ FN + +ALK
Sbjct: 414 GSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALK 447
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/430 (32%), Positives = 253/430 (58%), Gaps = 14/430 (3%)
Query: 143 NTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSE-CGRIEDAQWHFNQ 195
N++I YA + E AL +FR M P++ S+ ++KA + CG E Q H
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDK--YSFTFVLKACAAFCGFEEGRQIHGLF 166
Query: 196 MRE---RDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEAL 252
++ DV T+V+ +G + AR++ DRMPVR+ VSWN ++ Y + +DEA
Sbjct: 167 IKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEAR 226
Query: 253 ELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
LF+ M ER++ SWN +++G+ G + A+++F MP ++V++W AM+T Y G E
Sbjct: 227 ALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNE 286
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI 372
L++FNK+ D KP+ T V+VL AC+ L L++G+ +H I K + ++ +AL+
Sbjct: 287 VLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
+MYSKCG++ A +F +RD+ +WN +I+ + HG GK+A+ +F++M GF+ N
Sbjct: 347 DMYSKCGKIDKALEVFRA--TSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPN 404
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII 492
+T++ +L+AC+H G++++ + F+ + ++ +HY C+VDL GR G+++EA ++
Sbjct: 405 GITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELV 464
Query: 493 EGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWK 552
+ D + + LL C G + + +A ++L++ ++ Y+ +SN+YAS G+W+
Sbjct: 465 NEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWE 524
Query: 553 EAANVRMKMK 562
+ + R M+
Sbjct: 525 KVIDGRRNMR 534
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 186/382 (48%), Gaps = 43/382 (11%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
NT ++ + G + ARK+ DRMP RD W ++++ Y+ G++ EAR LFD + ++V
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEE-RNV 237
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER 168
+W +++GY ++EA+ +F MP R+V SWN M+ YA G + L++F +M +
Sbjct: 238 ESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDD 297
Query: 169 NVVSWN--TIIKALSEC---GRIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDD 219
+ + T++ LS C G + +W + + ++ T +VD + G++D
Sbjct: 298 STEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDK 357
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDL 279
A E+F R+V +WN +I + + +ALE+F M + GF NG
Sbjct: 358 ALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEM----------VYEGFKPNG-- 405
Query: 280 NRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
IT+ +++ G+ ++A K+F + + + ++P + G
Sbjct: 406 ---------------ITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHY----GC 446
Query: 340 CSDLAG-LNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL-LRQRD 397
DL G + + ++ +L+++ E++ ++ +L+ + G+L A RI + L L RD
Sbjct: 447 MVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRD 506
Query: 398 LISWNGMIAAYAHHGYGKEAIN 419
+ M YA G ++ I+
Sbjct: 507 SSGYAQMSNLYASDGRWEKVID 528
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 293/547 (53%), Gaps = 20/547 (3%)
Query: 80 GTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNV 139
+IN Y +CG + AR +F+G KD+V W +V+ YV+ E++ +L M
Sbjct: 185 AALINAYSVCGSVDSARTVFEGI-LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF 243
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTI--------IKALSECGRIEDAQW 191
N D + A D + + + + + + ++ ++ G + DA
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 192 HFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM----PVRNVVSWNVMIKGYA--KN 245
FN+M + DV W+ M+ NG ++A +LF RM V N + + ++ G A K
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 246 RRLDEALE--LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG 303
L E L + + + D+ N L+ + + ++ A KLF E+ KN ++W ++ G
Sbjct: 364 SGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVG 423
Query: 304 YVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQE 363
Y G +A +F + + + TF + LGAC+ LA ++ G Q+H L KT +
Sbjct: 424 YENLGEGGKAFSMFREALRNQ-VSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAK 482
Query: 364 STYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNK 423
V ++LI+MY+KCG++ A+ +F+E + D+ SWN +I+ Y+ HG G++A+ + +
Sbjct: 483 KVAVSNSLIDMYAKCGDIKFAQSVFNE--METIDVASWNALISGYSTHGLGRQALRILDI 540
Query: 424 MQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAG 483
M++ + N +T++ +L+ CS+AGL+++G + F+ ++++ I+ +HY C+V L GR+G
Sbjct: 541 MKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSG 600
Query: 484 RLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSN 543
+L +A +IEG+ + S+ +W +L+ N + + A++ILKI P++ TY L+SN
Sbjct: 601 QLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSN 660
Query: 544 MYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLD 603
MYA +W A++R MK+ G+KK+PG SW+E V F VG H +L+ +L
Sbjct: 661 MYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEW 720
Query: 604 LHTKMKK 610
L+ K +
Sbjct: 721 LNMKATR 727
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 226/503 (44%), Gaps = 75/503 (14%)
Query: 71 MPERDLHLWGTMINGYIM-----------CGVIKEARKLFDGPDAMKDVVTWTALVNGYV 119
+P D H +G M+ I C ++K+ L D+ L+N YV
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCL--------DLFATNILLNAYV 95
Query: 120 KLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKA 179
K ++A LF EMPERN S+ T+ GYA L R E N + + +K
Sbjct: 96 KAGFDKDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKL 155
Query: 180 LSECGRIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVRNVVSW 235
+ E W + + + S +++ ++ G VD AR +F+ + +++V W
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVW 215
Query: 236 NVMIKGYAKNRRLDEALELFERMPERD-MPSWNTLVTG---------------------- 272
++ Y +N +++L+L M MP+ T T
Sbjct: 216 AGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILK 275
Query: 273 ----------------FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKI 316
+ Q GD++ A K+F+EMP+ +V+ W+ M+ + Q+G EA+ +
Sbjct: 276 TCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDL 335
Query: 317 FNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
F +++ + PN T ++L C+ G+Q+H L+ K F YV +ALI++Y+
Sbjct: 336 FIRMREAFVV-PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYA 394
Query: 377 KCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
KC ++ A ++F E L ++ +SWN +I Y + G G +A ++F + +VT+
Sbjct: 395 KCEKMDTAVKLFAE--LSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTF 452
Query: 437 VELLTACSHAGLVEEGLQYFDKLLK-NRSIQVREDHYACLVDLCGRAGRLKEA---FNII 492
L AC+ ++ G+Q +K N + +V + L+D+ + G +K A FN +
Sbjct: 453 SSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNS--LIDMYAKCGDIKFAQSVFNEM 510
Query: 493 EGLGVDLSLSVWGPLLAGCNVHG 515
E + V + W L++G + HG
Sbjct: 511 ETIDV----ASWNALISGYSTHG 529
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 193/436 (44%), Gaps = 90/436 (20%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL-------------------- 98
G +D AR +F+ + +D+ +W +++ Y+ G +++ KL
Sbjct: 195 GSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTAL 254
Query: 99 --------FDGPDAMKDVVTWTA----------LVNGYVKLNQIEEAERLFYEMPERNVR 140
FD + + T L+ Y +L + +A ++F EMP+ +V
Sbjct: 255 KASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVV 314
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIK--ALSECGRIEDAQWHFN 194
W+ MI + +NG +A+DLF RM E VV + ++I+ A+ +C + + Q H
Sbjct: 315 PWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGE-QLHGL 373
Query: 195 QMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEA 251
++ + D+ ++D A ++D A +LF + +N VSWN +I GY +A
Sbjct: 374 VVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKA 433
Query: 252 LELFERM---------------------------------------PERDMPSWNTLVTG 272
+F + + N+L+
Sbjct: 434 FSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDM 493
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+ + GD+ A+ +F+EM +V +W A+++GY HGL +AL+I + ++ D KPN T
Sbjct: 494 YAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMK-DRDCKPNGLT 552
Query: 333 FVTVLGACSDLAGLNEGQQIHQ-LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
F+ VL CS+ +++GQ+ + +I + + ++ + + G+L A ++ EG
Sbjct: 553 FLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI-EG 611
Query: 392 LLRQRDLISWNGMIAA 407
+ + ++ W M++A
Sbjct: 612 IPYEPSVMIWRAMLSA 627
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 148/368 (40%), Gaps = 96/368 (26%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA-------RKLFDGPDAMK--- 106
Q G + DA K+F+ MP+ D+ W MI + G EA R+ F P+
Sbjct: 294 QLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSS 353
Query: 107 ----------------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERN 138
D+ AL++ Y K +++ A +LF E+ +N
Sbjct: 354 ILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKN 413
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSW------------------------- 173
SWNT+I GY G+ KA +FR RN VS
Sbjct: 414 EVSWNTVIVGYENLGEGGKAFSMFRE-ALRNQVSVTEVTFSSALGACASLASMDLGVQVH 472
Query: 174 ---------------NTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVD 218
N++I ++CG I+ AQ FN+M DV SW ++ G + +G
Sbjct: 473 GLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGR 532
Query: 219 DARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERM-----PERDMPSWNTL 269
A + D M R N +++ ++ G + +D+ E FE M E + + +
Sbjct: 533 QALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCM 592
Query: 270 VTGFIQNGDLNRAEKLFHEMP-QKNVITWTAMMTGYVQHG-------LSEEALKIFNKLQ 321
V ++G L++A KL +P + +V+ W AM++ + +EE LKI K +
Sbjct: 593 VRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDE 652
Query: 322 ADHALKPN 329
A + L N
Sbjct: 653 ATYVLVSN 660
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 284/537 (52%), Gaps = 55/537 (10%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM-- 165
+V W +L++ Y K ++ +A +LF EMP R+V S N + G+ RN +TE L +RM
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLG 149
Query: 166 ------------------PERNVVS------------------WNTIIKALSECGRIEDA 189
PE +V+ N +I + +CG
Sbjct: 150 SGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSG 209
Query: 190 QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM------PVRNVVSWNVMIKGYA 243
+ F+ M R+V + T ++ GL N +D LF M P N V++ + +
Sbjct: 210 RGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHP--NSVTYLSALAACS 267
Query: 244 KNRRLDEALE----LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTA 299
++R+ E + L++ E ++ + L+ + + G + A +F + + ++ T
Sbjct: 268 GSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTV 327
Query: 300 MMTGYVQHGLSEEALKIFNK-LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
++ G Q+G EEA++ F + LQA + N + VLG L G+Q+H L+ K
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVS--AVLGVSFIDNSLGLGKQLHSLVIK 385
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAI 418
F +T+V + LINMYSKCG+L ++ +F + +R+ +SWN MIAA+A HG+G A+
Sbjct: 386 RKFSGNTFVNNGLINMYSKCGDLTDSQTVFRR--MPKRNYVSWNSMIAAFARHGHGLAAL 443
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL 478
L+ +M L + DVT++ LL ACSH GL+++G + +++ + I+ R +HY C++D+
Sbjct: 444 KLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDM 503
Query: 479 CGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTY 538
GRAG LKEA + I+ L + +W LL C+ HG+ ++G+ A+++ + P+++ +
Sbjct: 504 LGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAH 563
Query: 539 SLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
L++N+Y+S GKWKE A +MK G+ K+ G S +E+ + FVV DK H Q+E
Sbjct: 564 ILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAE 620
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 175/359 (48%), Gaps = 24/359 (6%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
++++ + +I Y CG R +FDG + ++V+T TA+++G ++ E+ RLF
Sbjct: 187 DKEISVGNKLITSYFKCGCSVSGRGVFDGM-SHRNVITLTAVISGLIENELHEDGLRLFS 245
Query: 133 EMPERNVRSWNTM--------IDGYAR--NGQTEKALDLFRRMPERNVVSWNTIIKALSE 182
M R + N++ G R GQ AL L++ E + + ++ S+
Sbjct: 246 LM-RRGLVHPNSVTYLSALAACSGSQRIVEGQQIHAL-LWKYGIESELCIESALMDMYSK 303
Query: 183 CGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPV------RNVVSWN 236
CG IEDA F E D S T ++ GLA NG ++A + F RM NVVS
Sbjct: 304 CGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAV 363
Query: 237 VMIKGYAKNRRLDEALE--LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV 294
+ + + L + L + +R + N L+ + + GDL ++ +F MP++N
Sbjct: 364 LGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNY 423
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ-IH 353
++W +M+ + +HG ALK++ ++ +KP TF+++L ACS + +++G++ ++
Sbjct: 424 VSWNSMIAAFARHGHGLAALKLYEEMTTLE-VKPTDVTFLSLLHACSHVGLIDKGRELLN 482
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
++ + T + +I+M + G L A+ D L + D W ++ A + HG
Sbjct: 483 EMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDS-LPLKPDCKIWQALLGACSFHG 540
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/484 (31%), Positives = 252/484 (52%), Gaps = 46/484 (9%)
Query: 158 ALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKS-------------- 203
+L +FR ERN N +I+ L+E R E + HF M VK
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 204 ----WT---------------------TMVDGLAINGRVDDARELFDRMPVR----NVVS 234
W ++VD A G++ A ++F+ P R +++
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILI 198
Query: 235 WNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV 294
WNV+I GY + + + A LF MPER+ SW+TL+ G++ +G+LNRA++LF MP+KNV
Sbjct: 199 WNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNV 258
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
++WT ++ G+ Q G E A+ + ++ + LKPN T VL ACS L G +IH
Sbjct: 259 VSWTTLINGFSQTGDYETAISTYFEM-LEKGLKPNEYTIAAVLSACSKSGALGSGIRIHG 317
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
I + + +AL++MY+KCGEL A +F + +D++SW MI +A HG
Sbjct: 318 YILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSN--MNHKDILSWTAMIQGWAVHGRF 375
Query: 415 KEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC 474
+AI F +M G + ++V ++ +LTAC ++ V+ GL +FD + + +I+ HY
Sbjct: 376 HQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVL 435
Query: 475 LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPEN 534
+VDL GRAG+L EA ++E + ++ L+ W L C H + V++ +L+++PE
Sbjct: 436 VVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPEL 495
Query: 535 AGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQS 594
G+Y L +AS G ++ R+ ++ + ++ G S++E+ + F GD SH +
Sbjct: 496 CGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLT 555
Query: 595 ELLG 598
+ +G
Sbjct: 556 QEIG 559
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 143/293 (48%), Gaps = 27/293 (9%)
Query: 81 TMINGYIMCGVIKEARKLFD-GPDAMK--DVVTWTALVNGYVKLNQIEEAERLFYEMPER 137
++++ Y G +K A ++F+ PD +K ++ W L+NGY + + A LF MPER
Sbjct: 166 SLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER 225
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMR 197
N SW+T+I GY +G+ +A LF MPE+NVVSW T+I S+ G E A + +M
Sbjct: 226 NSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEML 285
Query: 198 ERDVKSWTTMV--------------DGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
E+ +K + G+ I+G + D DR ++ YA
Sbjct: 286 EKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDR------AIGTALVDMYA 339
Query: 244 KNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEM----PQKNVITWTA 299
K LD A +F M +D+ SW ++ G+ +G ++A + F +M + + + + A
Sbjct: 340 KCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLA 399
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
++T + + L F+ ++ D+A++P +V V+ LNE ++
Sbjct: 400 VLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHEL 452
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 21/278 (7%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-GPDAMKD 107
N I+ C+ + A LF MPER+ W T+I GY+ G + A++LF+ P+ K+
Sbjct: 200 NVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE--KN 257
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFR 163
VV+WT L+NG+ + E A ++EM E+ ++ + ++ +++G + +
Sbjct: 258 VVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHG 317
Query: 164 RMPERNVVSWNTIIKAL----SECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDD 219
+ + + I AL ++CG ++ A F+ M +D+ SWT M+ G A++GR
Sbjct: 318 YILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQ 377
Query: 220 ARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMP-----ERDMPSWNTLV 270
A + F +M + V + ++ + +D L F+ M E + + +V
Sbjct: 378 AIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVV 437
Query: 271 TGFIQNGDLNRAEKLFHEMP-QKNVITWTAMMTGYVQH 307
+ G LN A +L MP ++ TW A+ H
Sbjct: 438 DLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAH 475
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 273 bits (698), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 170/659 (25%), Positives = 319/659 (48%), Gaps = 99/659 (15%)
Query: 17 LKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDL 76
L H ++NG+ +S+S +L++ G + ARK+F+ M ERD+
Sbjct: 66 LSIHQQVLVNGFSSDFYISSSLVNLYAKF-------------GLLAHARKVFEEMRERDV 112
Query: 77 HLWGTMINGYIMCGVIKEARKLFD---------GPDAM---------------------- 105
W MI Y G++ EA L + GP +
Sbjct: 113 VHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVI 172
Query: 106 ----KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL 161
D+ +++N Y K + + +A+ LF +M +R++ SWNTMI GYA G + L L
Sbjct: 173 YGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKL 232
Query: 162 FRRM------PERNVVSWNTIIKALS---ECGRIEDAQWHFNQMRERDVKSWTTMVDGLA 212
RM P++ + + E GR+ Q + D+ T ++
Sbjct: 233 LYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQI-VKTGFDVDMHLKTALITMYL 291
Query: 213 INGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----------- 261
G+ + + + + +P ++VV W VMI G + R ++AL +F M +
Sbjct: 292 KCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIAS 351
Query: 262 ----------------------------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKN 293
D P+ N+L+T + + G L+++ +F M +++
Sbjct: 352 VVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERD 411
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
+++W A+++GY Q+ +AL +F +++ + ++ T V++L ACS L G+ IH
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIH 471
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGY 413
++ ++ + + V +AL++MYSKCG L A+R FD + +D++SW +IA Y HG
Sbjct: 472 CIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDS--ISWKDVVSWGILIAGYGFHGK 529
Query: 414 GKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA 473
G A+ ++++ G + N V ++ +L++CSH G+V++GL+ F ++++ ++ +H A
Sbjct: 530 GDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLA 589
Query: 474 CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPE 533
C+VDL RA R+++AF + S+ V G +L C +G ++ ++ + +++++P
Sbjct: 590 CVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPG 649
Query: 534 NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHS 592
+AG Y L + +A++ +W + + +M+ GLKK PG S +E+ F + SHS
Sbjct: 650 DAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSHS 708
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 148/306 (48%), Gaps = 49/306 (16%)
Query: 306 QHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQEST 365
HG ++ L F+ + A+ L P+T TF ++L AC+ L L+ G IHQ + F
Sbjct: 23 SHGDHKQVLSTFSSMLANKLL-PDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDF 81
Query: 366 YVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQ 425
Y+ S+L+N+Y+K G L AR++F+E +R+RD++ W MI Y+ G EA +L N+M+
Sbjct: 82 YISSSLVNLYAKFGLLAHARKVFEE--MRERDVVHWTAMIGCYSRAGIVGEACSLVNEMR 139
Query: 426 ELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRL 485
G + VT +E+L+ +L+ +Q CL D
Sbjct: 140 FQGIKPGPVTLLEMLSG----------------VLEITQLQ-------CLHD-------- 168
Query: 486 KEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD-IGKLVAKKIL-KIEPENAGTYSLLSN 543
F +I G D ++V +L N++ D +G AK + ++E + +++ + +
Sbjct: 169 ---FAVIYGF--DCDIAVMNSML---NLYCKCDHVGD--AKDLFDQMEQRDMVSWNTMIS 218
Query: 544 MYASVGKWKEAANVRMKMKDKGLK--KQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLL 601
YASVG E + +M+ GL+ +Q + + V T+ +G H Q G+
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGF-D 277
Query: 602 LDLHTK 607
+D+H K
Sbjct: 278 VDMHLK 283
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 271 bits (694), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 170/635 (26%), Positives = 314/635 (49%), Gaps = 92/635 (14%)
Query: 63 DARKLFDRMPERDLHLWGTMING-----------YIMCGVIKEARKL--FDGPDAMK--- 106
DAR++F M +R L+ W T++ Y + ++ K F P A+K
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 107 -----------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWN 143
D+ ++L+ Y+K ++ EA R+F E+ + ++ +W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 144 TMIDGYARNGQTEKALDLFRRMPERNVVSWN--TIIKALSECGRIEDAQW----HFNQMR 197
+M+ G+ +NG +A++ FRRM + V+ + T+I +S C ++ +++ H +R
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 198 ---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALEL 254
D+ ++++ A + +A LF + ++V+SW+ +I Y +N EAL +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 255 FERMP---------------------------------------ERDMPSWNTLVTGFIQ 275
F M E ++ LV +++
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMK 311
Query: 276 NGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVT 335
A +F +P+K+V++W A+++G+ +G++ +++ F+ + ++ +P+ V
Sbjct: 312 CFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVK 371
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ 395
VLG+CS+L L + + H + K F + ++ ++L+ +YS+CG L A ++F+ L+
Sbjct: 372 VLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK- 430
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVEEGLQ 454
D + W +I Y HG G +A+ FN M + + N+VT++ +L+ACSHAGL+ EGL+
Sbjct: 431 -DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLR 489
Query: 455 YFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVH 514
F ++ + + +HYA LVDL GR G L A I + + + + G LL C +H
Sbjct: 490 IFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIH 549
Query: 515 GNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSW 574
N ++ + VAKK+ ++E +AG Y L+SN+Y G+W+ +R +K +G+KK S
Sbjct: 550 QNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESL 609
Query: 575 VEVGNTVQVFVVGDKSHSQSELLGYLL--LDLHTK 607
+E+ V FV D+ H + E + LL LDLH K
Sbjct: 610 IEIRRKVHRFVADDELHPEKEPVYGLLKELDLHMK 644
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 179/658 (27%), Positives = 322/658 (48%), Gaps = 95/658 (14%)
Query: 42 HSAMKDCNTSISRLCQEGRIDDARKLFDRMPER-DLHLWGTMINGYIMCGVIKEARKLF- 99
HS N +S + + AR+LFD E+ D LW ++++ Y G E +LF
Sbjct: 214 HSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFR 273
Query: 100 ------DGPDAMKDVVTWTA--------------------------------LVNGYVKL 121
P++ V TA L+ Y +
Sbjct: 274 EMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC 333
Query: 122 NQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTII 177
++ +AER+ +M +V +WN++I GY +N ++AL+ F M + + VS +II
Sbjct: 334 GKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSII 393
Query: 178 KALSECGRIED----AQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR 230
A GR+ + + H ++ + +++ T++D + F RM +
Sbjct: 394 AA---SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPER----------------------------- 261
+++SW +I GYA+N EALELF + ++
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 262 ---------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
D N LV + + ++ A ++F + K+V++WT+M++ +G E
Sbjct: 511 CHILRKGLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI 372
A+++F ++ + L ++ + +L A + L+ LN+G++IH + + F + A++
Sbjct: 571 AVELFRRM-VETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVV 629
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
+MY+ CG+L A+ +FD + ++ L+ + MI AY HG GK A+ LF+KM+ +
Sbjct: 630 DMYACCGDLQSAKAVFDR--IERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPD 687
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII 492
++++ LL ACSHAGL++EG + + ++ +HY CLVD+ GRA + EAF +
Sbjct: 688 HISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFV 747
Query: 493 EGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWK 552
+ + + + VW LLA C H +IG++ A+++L++EP+N G L+SN++A G+W
Sbjct: 748 KMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWN 807
Query: 553 EAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
+ VR KMK G++K PGCSW+E+ V F DKSH +S+ + L ++ K+++
Sbjct: 808 DVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLER 865
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 125/526 (23%), Positives = 219/526 (41%), Gaps = 115/526 (21%)
Query: 54 RLCQEGRIDDARKLFDRMPERDL-HLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWT 112
R +GR +R +F P +L L G ++ Y CG + +A K+FD
Sbjct: 94 RAVSQGRQLHSR-IFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFD------------ 140
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-- 170
EMP+R +WNTMI Y NG+ AL L+ M V
Sbjct: 141 --------------------EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPL 180
Query: 171 --VSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGL----AINGRVDDARELF 224
S+ ++KA ++ I + + + S +V+ L A N + AR LF
Sbjct: 181 GLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 225 DRMPVR-NVVSWNVMIKGYAKNRRLDEALELFERM------------------------- 258
D + + V WN ++ Y+ + + E LELF M
Sbjct: 241 DGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYA 300
Query: 259 ---------------PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG 303
++ N L+ + + G + +AE++ +M +V+TW +++ G
Sbjct: 301 KLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKG 360
Query: 304 YVQHGLSEEALKIFNKL-QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQ 362
YVQ+ + +EAL+ F+ + A H K + + +++ A L+ L G ++H + K +
Sbjct: 361 YVQNLMYKEALEFFSDMIAAGH--KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWD 418
Query: 363 ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
+ V + LI+MYSKC R F + +DLISW +IA YA + EA+ LF
Sbjct: 419 SNLQVGNTLIDMYSKCNLTCYMGRAFLR--MHDKDLISWTTVIAGYAQNDCHVEALELFR 476
Query: 423 KMQELGFQANDVTYVELLTACS-----------HAGLVEEGLQYFDKLLKNRSIQVREDH 471
+ + + +++ +L A S H ++ +GL D +++N
Sbjct: 477 DVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL--LDTVIQNE-------- 526
Query: 472 YACLVDLCGRAGRLKEAFNIIEGL-GVDLSLSVWGPLLAGCNVHGN 516
LVD+ G+ + A + E + G D + W +++ ++GN
Sbjct: 527 ---LVDVYGKCRNMGYATRVFESIKGKD--VVSWTSMISSSALNGN 567
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 148/301 (49%), Gaps = 18/301 (5%)
Query: 222 ELFDRMPVRN----VVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWN------TLVT 271
E F R+ V V ++ +++ K R + + +L R+ + PS+ LV
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIF-KTFPSFELDFLAGKLVF 124
Query: 272 GFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
+ + G L+ AEK+F EMP + W M+ YV +G AL ++ ++ + +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVE-GVPLGLS 183
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
+F +L AC+ L + G ++H L+ K + + ++V+AL++MY+K +L ARR+FD G
Sbjct: 184 SFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD-G 242
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEE 451
+ D + WN ++++Y+ G E + LF +M G N T V LTAC +
Sbjct: 243 FQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKL 302
Query: 452 GLQYFDKLLKNRSIQVREDHYAC--LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLA 509
G + +LK+ + + Y C L+ + R G++ +A I+ + + + W L+
Sbjct: 303 GKEIHASVLKSSTHS--SELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIK 359
Query: 510 G 510
G
Sbjct: 360 G 360
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 200/673 (29%), Positives = 301/673 (44%), Gaps = 161/673 (23%)
Query: 39 SSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTM---------------- 82
+ LHS N + L + GR+D+AR++FD+MPERD W TM
Sbjct: 27 TKLHS-----NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKL 81
Query: 83 ---------------INGYIMCGVIKEARKLF-----DG--PDAMK-------------- 106
I+GY G EA LF DG P+
Sbjct: 82 FRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLL 141
Query: 107 -----------------DVVTWTALVNGYVKLNQIEEAERLFYEMP-ERNVRSWNTMIDG 148
DV L+ Y + +I EAE LF M E+N +W +M+ G
Sbjct: 142 LRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTG 201
Query: 149 YARNGQTEKALDLFRRMP-ERNVVSWNTIIKALSECGRIE----DAQWHFNQMR---ERD 200
Y++NG KA++ FR + E N + T L+ C + Q H ++ + +
Sbjct: 202 YSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTN 261
Query: 201 VKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE 260
+ + ++D A ++ AR L + M V +VVSWN MI G + + EAL +F RM E
Sbjct: 262 IYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHE 321
Query: 261 RDM-------PSW---------------------------------NTLVTGFIQNGDLN 280
RDM PS N LV + + G ++
Sbjct: 322 RDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMD 381
Query: 281 RAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC 340
A K+F M +K+VI+WTA++TG +G +EALK+F ++ + P+ +VL A
Sbjct: 382 SALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVG-GITPDKIVTASVLSAS 440
Query: 341 SDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS 400
++L L GQQ+H K+ F S V ++L+ MY+KCG L A IF+ + RDLI+
Sbjct: 441 AELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNS--MEIRDLIT 498
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLL 460
W +I YA +G L+E+ +YFD +
Sbjct: 499 WTCLIVGYAKNG-----------------------------------LLEDAQRYFDSMR 523
Query: 461 KNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIG 520
I +HYAC++DL GR+G + ++ + V+ +VW +LA HGN + G
Sbjct: 524 TVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENG 583
Query: 521 KLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNT 580
+ AK ++++EP NA Y LSNMY++ G+ EAANVR MK + + K+PGCSWVE
Sbjct: 584 ERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGK 643
Query: 581 VQVFVVGDKSHSQ 593
V F+ D+ H +
Sbjct: 644 VHSFMSEDRRHPR 656
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/289 (32%), Positives = 164/289 (56%), Gaps = 10/289 (3%)
Query: 230 RNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEM 289
R + N+++ +K+ R+DEA ++F++MPERD +WNT++ + + L+ AEKLF
Sbjct: 26 RTKLHSNLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSN 85
Query: 290 PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG 349
P KN I+W A+++GY + G EA +F ++Q+D +KPN T +VL C+ L L G
Sbjct: 86 PVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD-GIKPNEYTLGSVLRMCTSLVLLLRG 144
Query: 350 QQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYA 409
+QIH KT F VV+ L+ MY++C + A +F E + +++ ++W M+ Y+
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLF-ETMEGEKNNVTWTSMLTGYS 203
Query: 410 HHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKN---RSIQ 466
+G+ +AI F ++ G Q+N T+ +LTAC+ G+Q ++K+ +I
Sbjct: 204 QNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIY 263
Query: 467 VREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
V+ + L+D+ + ++ A ++EG+ VD +S W ++ GC G
Sbjct: 264 VQ----SALIDMYAKCREMESARALLEGMEVDDVVS-WNSMIVGCVRQG 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/334 (21%), Positives = 132/334 (39%), Gaps = 55/334 (16%)
Query: 9 FILMHAPKLK----THPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRL--------- 55
F MH +K T P+ I+N + RT SS H + + +L
Sbjct: 316 FGRMHERDMKIDDFTIPS-ILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY 374
Query: 56 CQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDA---MKDVVTWT 112
+ G +D A K+F+ M E+D+ W ++ G G EA KLF D +
Sbjct: 375 AKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTA 434
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSW----NTMIDGYARNGQTEKALDLFRRMPER 168
++++ +L +E +++ + S N+++ Y + G E A +F M R
Sbjct: 435 SVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIR 494
Query: 169 NVVSWNTIIKALSECGRIEDAQWHFNQMR-----ERDVKSWTTMVDGLAINGRVDDAREL 223
++++W +I ++ G +EDAQ +F+ MR + + M+D +G +L
Sbjct: 495 DLITWTCLIVGYAKNGLLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQL 554
Query: 224 FDRMPVR-NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRA 282
+M V + W ++ K+ G I+NG+ RA
Sbjct: 555 LHQMEVEPDATVWKAILAASRKH--------------------------GNIENGE--RA 586
Query: 283 EKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKI 316
K E+ N + + + Y G +EA +
Sbjct: 587 AKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANV 620
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 55/257 (21%)
Query: 18 KTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLH 77
+ H +I +G+P S++ N+ ++ + G ++DA +F+ M RDL
Sbjct: 451 QVHGNYIKSGFP-------------SSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLI 497
Query: 78 LWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER 137
W +I GY G++++A++ F D+M+ V T PE
Sbjct: 498 TWTCLIVGYAKNGLLEDAQRYF---DSMRTVYGITP--------------------GPEH 534
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRMP-ERNVVSWNTIIKALSECGRIEDAQWHFNQM 196
+ MID + R+G K L +M E + W I+ A + G IE+ + +
Sbjct: 535 ----YACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTL 590
Query: 197 RE---RDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV-----VSWNVMIKG-----YA 243
E + + + + + GR D+A + M RN+ SW V KG +
Sbjct: 591 MELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSW-VEEKGKVHSFMS 649
Query: 244 KNRRLDEALELFERMPE 260
++RR +E++ ++ E
Sbjct: 650 EDRRHPRMVEIYSKVDE 666
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/328 (41%), Positives = 209/328 (63%), Gaps = 5/328 (1%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
++LV + +G++ A K+F EMP++NV++WTAM++G+ Q + LK+++K++ +
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTS- 217
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
PN TF +L AC+ L +G+ +H + ++ ++LI+MY KCG+L A R
Sbjct: 218 DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFR 277
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN-KMQELGFQANDVTYVELLTACSH 445
IFD+ +D++SWN MIA YA HG +AI LF M + G + + +TY+ +L++C H
Sbjct: 278 IFDQ--FSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRH 335
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWG 505
AGLV+EG ++F+ L+ ++ +HY+CLVDL GR G L+EA +IE + + + +WG
Sbjct: 336 AGLVKEGRKFFN-LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWG 394
Query: 506 PLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 565
LL C VHG+ G A++ L +EP+ A T+ L+N+YASVG WKEAA VR MKDKG
Sbjct: 395 SLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKG 454
Query: 566 LKKQPGCSWVEVGNTVQVFVVGDKSHSQ 593
LK PGCSW+E+ N V +F D S+ +
Sbjct: 455 LKTNPGCSWIEINNYVFMFKAEDGSNCR 482
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 162/346 (46%), Gaps = 42/346 (12%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
+ DV ++LV Y ++E A ++F EMPERNV SW MI G+A+ + + L L+ +
Sbjct: 152 ISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSK 211
Query: 165 M----PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSW----TTMVDGLAINGR 216
M + N ++ ++ A + G + + Q +KS+ +++ G
Sbjct: 212 MRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGD 271
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQN 276
+ DA +FD+ ++VVSWN MI GYA++ +A+ELFE M MP T
Sbjct: 272 LKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM----MPKSGT-------- 319
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
+ + IT+ +++ GL +E K FN L A+H LKP + +
Sbjct: 320 --------------KPDAITYLGVLSSCRHAGLVKEGRKFFN-LMAEHGLKPELNHYSCL 364
Query: 337 LGACSDLAG-LNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ 395
+ DL G Q+ +LI + ++ + +L+ G++ R +E L+ +
Sbjct: 365 V----DLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLE 420
Query: 396 RDLISWNGMIA-AYAHHGYGKEAINLFNKMQELGFQAN-DVTYVEL 439
D + + +A YA GY KEA + M++ G + N +++E+
Sbjct: 421 PDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEI 466
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 109/229 (47%), Gaps = 48/229 (20%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGY-------IMCGVIKEARKLFDGPD-----AMK 106
G +++A K+F+ MPER++ W MI+G+ I + + RK P+ A+
Sbjct: 169 GEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALL 228
Query: 107 DVVTWT--------------------------ALVNGYVKLNQIEEAERLFYEMPERNVR 140
T + +L++ Y K +++A R+F + ++V
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPER-----NVVSWNTIIKALSECGRIEDAQWHFNQ 195
SWN+MI GYA++G +A++LF M + + +++ ++ + G +++ + FN
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 196 MRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMI 239
M E +K ++ +VD L G + +A EL + MP++ N V W ++
Sbjct: 349 MAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 344 AGLNE----GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
GLN G H L K F Y+ S+L+ +Y GE+ A ++F+E + +R+++
Sbjct: 130 CGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEE--MPERNVV 187
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
SW MI+ +A + L++KM++ ND T+ LL+AC+ +G + +G
Sbjct: 188 SWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG------- 240
Query: 460 LKNRSIQVREDHYA---------CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
RS+ + H L+ + + G LK+AF I + + + W ++AG
Sbjct: 241 ---RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVVSWNSMIAG 296
Query: 511 CNVHGNA 517
HG A
Sbjct: 297 YAQHGLA 303
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 26/178 (14%)
Query: 26 NGYPFLRTMSTSTSS-------------LHSAMKD----CNTSISRLCQEGRIDDARKLF 68
N Y F +S T S LH +K N+ IS C+ G + DA ++F
Sbjct: 220 NDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIF 279
Query: 69 DRMPERDLHLWGTMINGYIMCGVIKEARKLFD----GPDAMKDVVTWTALVNGYVKLNQI 124
D+ +D+ W +MI GY G+ +A +LF+ D +T+ +++ +
Sbjct: 280 DQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLV 339
Query: 125 EEAERLFYEMPERNVRS----WNTMIDGYARNGQTEKALDLFRRMPER-NVVSWNTII 177
+E + F M E ++ ++ ++D R G ++AL+L MP + N V W +++
Sbjct: 340 KEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/478 (30%), Positives = 257/478 (53%), Gaps = 14/478 (2%)
Query: 143 NTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECG------RIEDAQWHFNQM 196
NT+++ Y + G AL +F MP R+ ++W +++ AL++ + + + +
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 197 RERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV----MIKGYAKNRRLDEAL 252
R D ++ +V A G +D R++ V + V ++ YAK L+ A
Sbjct: 102 RPDDF-VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAK 160
Query: 253 ELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
+F+ + ++ SW +V+G+ ++G A +LF +P KN+ +WTA+++G+VQ G E
Sbjct: 161 AVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLE 220
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI 372
A +F +++ + + +++GAC++LA G+Q+H L+ F ++ +ALI
Sbjct: 221 AFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALI 280
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
+MY+KC ++ A+ IF +R RD++SW +I A HG ++A+ L++ M G + N
Sbjct: 281 DMYAKCSDVIAAKDIFSR--MRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPN 338
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII 492
+VT+V L+ ACSH G VE+G + F + K+ I+ HY CL+DL GR+G L EA N+I
Sbjct: 339 EVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI 398
Query: 493 EGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL-KIEPENAGTYSLLSNMYASVGKW 551
+ W LL+ C G +G +A ++ + ++ TY LLSN+YAS W
Sbjct: 399 HTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLW 458
Query: 552 KEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
+ + R K+ + ++K PG S VEV +VF G+ SH E + LL L +M+
Sbjct: 459 GKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMR 516
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/446 (22%), Positives = 185/446 (41%), Gaps = 91/446 (20%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMING----------------------- 85
NT ++ + G A ++FD MP RD W +++
Sbjct: 42 NTLVNVYGKCGAASHALQVFDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGL 101
Query: 86 ----YIMCGVIKEARKL------------FDGPDAMKDVVTWTALVNGYVKLNQIEEAER 129
++ ++K L F + D V ++LV+ Y K + A+
Sbjct: 102 RPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKA 161
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDA 189
+F + +N SW M+ GYA++G+ E+AL+LFR +P +N+ SW +I + G+ +A
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEA 221
Query: 190 QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSW-------------N 236
F +MR V ++D L ++ V L + R V N
Sbjct: 222 FSVFTEMRRERVD----ILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISN 277
Query: 237 VMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
+I YAK + A ++F RM RD+ SW +L+ G Q
Sbjct: 278 ALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQ--------------------- 316
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
HG +E+AL +++ + H +KPN TFV ++ ACS + + +G+++ Q +
Sbjct: 317 ----------HGQAEKALALYDDM-VSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSM 365
Query: 357 SKT-AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK 415
+K + S + L+++ + G L A + + D +W +++A G G+
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLI-HTMPFPPDEPTWAALLSACKRQGRGQ 424
Query: 416 EAINLFNKMQELGFQANDVTYVELLT 441
I + + + F+ D + LL+
Sbjct: 425 MGIRIADHLVS-SFKLKDPSTYILLS 449
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 149/316 (47%), Gaps = 52/316 (16%)
Query: 81 TMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
++++ Y CG++ A+ +FD +K+ ++WTA+V+GY K + EEA LF +P +N+
Sbjct: 145 SLVDMYAKCGLLNSAKAVFDSIR-VKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLY 203
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERN------------------------------- 169
SW +I G+ ++G+ +A +F M
Sbjct: 204 SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 170 ---------VVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDA 220
V N +I ++C + A+ F++MR RDV SWT+++ G+A +G+ + A
Sbjct: 264 VIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKA 323
Query: 221 RELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPER-----DMPSWNTLVT 271
L+D M V V++ +I + +++ ELF+ M + + + L+
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Query: 272 GFIQNGDLNRAEKLFHEMP-QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK-PN 329
++G L+ AE L H MP + TW A+++ + G + ++I + L + LK P+
Sbjct: 384 LLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPS 443
Query: 330 TGTFVTVLGACSDLAG 345
T ++ + A + L G
Sbjct: 444 TYILLSNIYASASLWG 459
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 118/225 (52%), Gaps = 10/225 (4%)
Query: 243 AKNRRLDEALELFERMPERDM----PSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWT 298
A+NR L A L + + + P NTLV + + G + A ++F EMP ++ I W
Sbjct: 14 ARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWA 73
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
+++T Q LS + L +F+ + + L+P+ F ++ AC++L ++ G+Q+H
Sbjct: 74 SVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIV 133
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAI 418
+ + V S+L++MY+KCG L+ A+ +FD +R ++ ISW M++ YA G +EA+
Sbjct: 134 SEYANDEVVKSSLVDMYAKCGLLNSAKAVFDS--IRVKNTISWTAMVSGYAKSGRKEEAL 191
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR 463
LF + N ++ L++ +G E F ++ + R
Sbjct: 192 ELFRILP----VKNLYSWTALISGFVQSGKGLEAFSVFTEMRRER 232
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR 396
L C+ L + +H I K + + + L+N+Y KCG A ++FDE + R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDE--MPHR 67
Query: 397 DLISWNGMIAAYAHHGY-GKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQY 455
D I+W ++ A GK + G + +D + L+ AC++ G ++ G Q
Sbjct: 68 DHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Query: 456 FDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
+ + E + LVD+ + G L A + + + V ++S W +++G G
Sbjct: 128 HCHFIVSEYAN-DEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTIS-WTAMVSGYAKSG 185
Query: 516 NADIGKLVAKKILKIEP-ENAGTYSLLSNMYASVGKWKEAANVRMKMK 562
K A ++ +I P +N +++ L + + GK EA +V +M+
Sbjct: 186 R----KEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMR 229
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 222/371 (59%), Gaps = 7/371 (1%)
Query: 238 MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITW 297
++ Y+ L A +F+ +D+P+WN++V + + G ++ A KLF EMP++NVI+W
Sbjct: 103 LLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISW 162
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQA----DHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
+ ++ GYV G +EAL +F ++Q + ++PN T TVL AC L L +G+ +H
Sbjct: 163 SCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVH 222
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGY 413
I K + + +ALI+MY+KCG L A+R+F+ L ++D+ +++ MI A +G
Sbjct: 223 AYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN-ALGSKKDVKAYSAMICCLAMYGL 281
Query: 414 GKEAINLFNKMQEL-GFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
E LF++M N VT+V +L AC H GL+ EG YF +++ I HY
Sbjct: 282 TDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHY 341
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP 532
C+VDL GR+G +KEA + I + ++ + +WG LL+G + G+ + K++++++P
Sbjct: 342 GCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDP 401
Query: 533 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHS 592
N+G Y LLSN+YA G+W E +R +M+ KG+ K PGCS+VEV V FVVGD+S
Sbjct: 402 MNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQ 461
Query: 593 QSELLGYLLLD 603
+SE + Y +LD
Sbjct: 462 ESERI-YAMLD 471
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 165/332 (49%), Gaps = 32/332 (9%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
++D + +++N Y CG ++ A+++FD + KD+ W ++VN Y K I++A +LF
Sbjct: 94 DKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGS-KDLPAWNSVVNAYAKAGLIDDARKLFD 152
Query: 133 EMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWN--TIIKALSECGR- 185
EMPERNV SW+ +I+GY G+ ++ALDLFR M P V N T+ LS CGR
Sbjct: 153 EMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRL 212
Query: 186 --IEDAQW---HFNQMR-ERDVKSWTTMVDGLAINGRVDDARELFDRM-PVRNVVSWNVM 238
+E +W + ++ E D+ T ++D A G ++ A+ +F+ + ++V +++ M
Sbjct: 213 GALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAM 272
Query: 239 IKGYAKNRRLDEALELFERMPERDMPSWNT-----LVTGFIQNGDLNRAEKLFHEMPQKN 293
I A DE +LF M D + N+ ++ + G +N + F M ++
Sbjct: 273 ICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEF 332
Query: 294 VIT-----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
IT + M+ Y + GL +EA A ++P+ + ++L L +
Sbjct: 333 GITPSIQHYGCMVDLYGRSGLIKEA----ESFIASMPMEPDVLIWGSLLSGSRMLGDIKT 388
Query: 349 GQ-QIHQLISKTAFQESTYVVSALINMYSKCG 379
+ + +LI YV+ L N+Y+K G
Sbjct: 389 CEGALKRLIELDPMNSGAYVL--LSNVYAKTG 418
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 143/320 (44%), Gaps = 48/320 (15%)
Query: 174 NTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVV 233
+++ S CG + AQ F+ +D+ +W ++V+ A G +DDAR+LFD MP RNV+
Sbjct: 101 TSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVI 160
Query: 234 SWNVMIKGYAKNRRLDEALELFERMP---------------------------------- 259
SW+ +I GY + EAL+LF M
Sbjct: 161 SWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKW 220
Query: 260 ----------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEM-PQKNVITWTAMMTGYVQHG 308
E D+ L+ + + G L RA+++F+ + +K+V ++AM+ +G
Sbjct: 221 VHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYG 280
Query: 309 LSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ-LISKTAFQESTYV 367
L++E ++F+++ + PN+ TFV +LGAC +NEG+ + +I + S
Sbjct: 281 LTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQH 340
Query: 368 VSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL 427
++++Y + G + A F + + D++ W +++ G K ++ EL
Sbjct: 341 YGCMVDLYGRSGLIKEAES-FIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIEL 399
Query: 428 GFQANDVTYVELLTACSHAG 447
N YV L + G
Sbjct: 400 D-PMNSGAYVLLSNVYAKTG 418
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 165/412 (40%), Gaps = 98/412 (23%)
Query: 12 MHAP-KLKTHPTFIINGY---PFLRT----MSTSTSSLHSAM--------KDC---NTSI 52
+H P +TH ++ G PF+RT M +S L SA KD N+ +
Sbjct: 76 LHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVV 135
Query: 53 SRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF------------- 99
+ + G IDDARKLFD MPER++ W +INGY+MCG KEA LF
Sbjct: 136 NAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFV 195
Query: 100 ------------------------------DGPDAMKDVVTWTALVNGYVKLNQIEEAER 129
D D+V TAL++ Y K +E A+R
Sbjct: 196 RPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKR 255
Query: 130 LFYEM-PERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN--TIIKALSEC--- 183
+F + +++V++++ MI A G T++ LF M + ++ N T + L C
Sbjct: 256 VFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHR 315
Query: 184 GRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
G I + + +F M E F P ++ + M+ Y
Sbjct: 316 GLINEGKSYFKMMIEE------------------------FGITP--SIQHYGCMVDLYG 349
Query: 244 KNRRLDEALELFERMP-ERDMPSWNTLVTGFIQNGDLNRAE---KLFHEMPQKNVITWTA 299
++ + EA MP E D+ W +L++G GD+ E K E+ N +
Sbjct: 350 RSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVL 409
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ 351
+ Y + G E I ++++ K ++V V G + +E QQ
Sbjct: 410 LSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQ 461
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+H + P+ TF +L + + L GQ+ H I + +V ++L+NMYS CG+L
Sbjct: 55 NHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLR 114
Query: 383 IARRIFDE-------------------GL----------LRQRDLISWNGMIAAYAHHGY 413
A+R+FD+ GL + +R++ISW+ +I Y G
Sbjct: 115 SAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGK 174
Query: 414 GKEAINLFNKMQ-----ELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVR 468
KEA++LF +MQ E + N+ T +L+AC G +E+G ++ + +++
Sbjct: 175 YKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQG-KWVHAYIDKYHVEID 233
Query: 469 EDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD 518
L+D+ + G L+ A + LG + + ++ ++G D
Sbjct: 234 IVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTD 283
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 270 bits (689), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/517 (29%), Positives = 273/517 (52%), Gaps = 54/517 (10%)
Query: 122 NQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL--FRRMPERNVV-SWNTIIK 178
Q A RL ++ +++ W+++I ++ + L +R M V+ S +T
Sbjct: 50 TQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPP 109
Query: 179 ALSECGRIEDA---QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV 232
L ++ D+ Q+H + ++ + D +++ G + +G D A LFD ++V
Sbjct: 110 LLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDV 169
Query: 233 VSWNVMIKGYAKNRRLDEALELFERMPER------------------------------- 261
V+W MI G+ +N EA+ F M +
Sbjct: 170 VTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGL 229
Query: 262 ---------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
D+ ++LV + + + A+K+F EMP +NV+TWTA++ GYVQ ++
Sbjct: 230 YLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDK 289
Query: 313 ALKIFNK-LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
+ +F + L++D A PN T +VL AC+ + L+ G+++H + K + + +T + L
Sbjct: 290 GMLVFEEMLKSDVA--PNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTL 347
Query: 372 INMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
I++Y KCG L A +F+ L ++++ +W MI +A HGY ++A +LF M
Sbjct: 348 IDLYVKCGCLEEAILVFER--LHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSP 405
Query: 432 NDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNI 491
N+VT++ +L+AC+H GLVEEG + F + +++ + DHYAC+VDL GR G L+EA +
Sbjct: 406 NEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKAL 465
Query: 492 IEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKW 551
IE + ++ + VWG L C +H + ++GK A +++K++P ++G Y+LL+N+Y+ W
Sbjct: 466 IERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNW 525
Query: 552 KEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGD 588
E A VR +MKD+ + K PG SW+EV + F+ D
Sbjct: 526 DEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFD 562
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 178/376 (47%), Gaps = 28/376 (7%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
+ D + ++I+GY G+ A +LFDG + KDVVTWTA+++G+V+ EA F
Sbjct: 135 DSDPFVRNSLISGYSSSGLFDFASRLFDGAED-KDVVTWTAMIDGFVRNGSASEAMVYFV 193
Query: 133 EMPERNVRSWNTMIDGY---------ARNGQTEKALDLFRRMPERNVVSWNTIIKALSEC 183
EM + V + + R G++ L L + +V ++++ +C
Sbjct: 194 EMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKC 253
Query: 184 GRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM----------PVRNVV 233
+DAQ F++M R+V +WT ++ G + D +F+ M + +V+
Sbjct: 254 SCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVL 313
Query: 234 SWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKN 293
S + + RR+ + + E + + TL+ +++ G L A +F + +KN
Sbjct: 314 SACAHVGALHRGRRVH--CYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKN 371
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
V TWTAM+ G+ HG + +A +F + + H + PN TF+ VL AC+ + EG+++
Sbjct: 372 VYTWTAMINGFAAHGYARDAFDLFYTMLSSH-VSPNEVTFMAVLSACAHGGLVEEGRRLF 430
Query: 354 -QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMI-AAYAHH 411
+ + + + +++++ + G L A+ + + + +++ W + + H
Sbjct: 431 LSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVV-WGALFGSCLLHK 489
Query: 412 GY--GKEAINLFNKMQ 425
Y GK A + K+Q
Sbjct: 490 DYELGKYAASRVIKLQ 505
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/368 (23%), Positives = 144/368 (39%), Gaps = 91/368 (24%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DGPD 103
N+ IS G D A +LFD ++D+ W MI+G++ G EA F G
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 104 AMK----------------------------------DVVTWTALVNGYVKLNQIEEAER 129
A + DV ++LV+ Y K + ++A++
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM------------------------ 165
+F EMP RNV +W +I GY ++ +K + +F M
Sbjct: 262 VFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGA 321
Query: 166 ---------------PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDG 210
E N + T+I +CG +E+A F ++ E++V +WT M++G
Sbjct: 322 LHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMING 381
Query: 211 LAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPER----- 261
A +G DA +LF M +V V++ ++ A ++E LF M R
Sbjct: 382 FAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEP 441
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV-ITWTAMMTGYVQHG---LSEEALKIF 317
+ +V F + G L A+ L MP + + W A+ + H L + A
Sbjct: 442 KADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRV 501
Query: 318 NKLQADHA 325
KLQ H+
Sbjct: 502 IKLQPSHS 509
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 183/652 (28%), Positives = 311/652 (47%), Gaps = 107/652 (16%)
Query: 51 SISRLCQEGRIDDARKLFDRMPERD---------LHLWGTMINGYI-----MCGVIKEAR 96
S+ L G + DA K F + + LH ++++ + + GV A
Sbjct: 9 SLGHLASHGHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAH 68
Query: 97 KLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTE 156
+ G + +V LV Y N EA+ + + WN +I YA+N E
Sbjct: 69 CISSGVEYHSVLVP--KLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFE 126
Query: 157 KALDLFRRMPERNV----VSWNTIIKALSEC----------GRIEDAQWH---------- 192
+ + ++RM + + ++ +++KA E G IE + +
Sbjct: 127 EVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALI 186
Query: 193 ---------------FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVV 233
F++M ERD SW +++ A G +A ELFD+M +V+
Sbjct: 187 SMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVI 246
Query: 234 SWNVMIKGYAKNRRLDEALELFERMPERDMPSW--------------------------- 266
+WN++ G + AL L RM R+ P+
Sbjct: 247 TWNIISGGCLQTGNYVGALGLISRM--RNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHG 304
Query: 267 --------------NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
NTL+T + + DL A +F + + ++ TW ++++GY Q SEE
Sbjct: 305 LAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEE 364
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH-QLISKTAFQESTYVVSAL 371
A + ++ +PN+ T ++L C+ +A L G++ H ++ + F++ T + ++L
Sbjct: 365 ASHLLREMLVA-GFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 372 INMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
+++Y+K G++ A+++ D L+ +RD +++ +I Y + G G A+ LF +M G +
Sbjct: 424 VDVYAKSGKIVAAKQVSD--LMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKP 481
Query: 432 NDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNI 491
+ VT V +L+ACSH+ LV EG + F K+ I+ H++C+VDL GRAG L +A +I
Sbjct: 482 DHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDI 541
Query: 492 IEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKW 551
I + S + W LL C++HGN IGK A+K+L+++PEN G Y L++NMYA+ G W
Sbjct: 542 IHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSW 601
Query: 552 KEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLD 603
+ A VR M+D G+KK PGC+W++ + +F VGD S S Y LLD
Sbjct: 602 SKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTS-SPEACNTYPLLD 652
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/493 (23%), Positives = 204/493 (41%), Gaps = 75/493 (15%)
Query: 35 STSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKE 94
S SS S++ CN IS + + AR+LFDRM ERD W +IN Y G+ E
Sbjct: 169 SIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSE 228
Query: 95 ARKLFDG---PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMID---- 147
A +LFD V+TW + G ++ A L M R++ T +D
Sbjct: 229 AFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRM-----RNFPTSLDPVAM 283
Query: 148 ----------GYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMR 197
G R G+ L + + V NT+I S+C + A F Q
Sbjct: 284 IIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR-NTLITMYSKCKDLRHALIVFRQTE 342
Query: 198 ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALE 253
E + +W +++ G A + ++A L M V N ++ ++ A+ L E
Sbjct: 343 ENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKE 402
Query: 254 ----LFERMPERDMPS-WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHG 308
+ R +D WN+LV + ++G + A+++ M +++ +T+T+++ GY G
Sbjct: 403 FHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQG 462
Query: 309 LSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH-QLISKTAFQESTYV 367
AL +F ++ +KP+ T V VL ACS ++EG+++ ++ + +
Sbjct: 463 EGGVALALFKEMTRS-GIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQH 521
Query: 368 VSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL 427
S ++++Y + G L A+ I + +
Sbjct: 522 FSCMVDLYGRAGFLAKAKDI------------------------------------IHNM 545
Query: 428 GFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAG---R 484
++ + T+ LL AC G + G +KLL+ + +Y + ++ AG +
Sbjct: 546 PYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMK--PENPGYYVLIANMYAAAGSWSK 603
Query: 485 LKEAFNIIEGLGV 497
L E I+ LGV
Sbjct: 604 LAEVRTIMRDLGV 616
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 145/423 (34%), Positives = 241/423 (56%), Gaps = 14/423 (3%)
Query: 176 IIKALSECGRIEDAQWHFNQMRERDV---KSWTTMVDGLAINGRVDDARELFDRMPVRNV 232
+I S C R++ A+ F+ + + + K W M G + NG DA ++ M +
Sbjct: 173 LITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFI 232
Query: 233 ----VSWNVMIKGYA--KNRRLDEAL--ELFERMPERDMPSWNTLVTGFIQNGDLNRAEK 284
S +V +K K+ R+ + ++ +R + D +N L+ ++++G + A K
Sbjct: 233 EPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARK 292
Query: 285 LFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLA 344
+F M ++NV+TW ++++ + E +F K+Q + + + T T+L ACS +A
Sbjct: 293 VFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQ-EEMIGFSWATLTTILPACSRVA 351
Query: 345 GLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGM 404
L G++IH I K+ + ++++L++MY KCGE+ +RR+FD ++ +DL SWN M
Sbjct: 352 ALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFD--VMLTKDLASWNIM 409
Query: 405 IAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRS 464
+ YA +G +E INLF M E G + +T+V LL+ CS GL E GL F+++
Sbjct: 410 LNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFR 469
Query: 465 IQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVA 524
+ +HYACLVD+ GRAG++KEA +IE + S S+WG LL C +HGN +G++ A
Sbjct: 470 VSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAA 529
Query: 525 KKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVF 584
K++ +EP N G Y ++SN+YA W +R MK +G+KK+ GCSWV+V + +Q+F
Sbjct: 530 KELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIF 589
Query: 585 VVG 587
V G
Sbjct: 590 VAG 592
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 171/419 (40%), Gaps = 109/419 (26%)
Query: 27 GYPFLRTMSTSTSSLHSAMKDCN------------------TSISRLCQEGRIDDARKLF 68
Y L S SLH +K C+ ++ +C+ R+D ARK+F
Sbjct: 133 AYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCR--RLDLARKIF 190
Query: 69 DRMPERDL---HLWGTMINGY---------------IMCGVIKEARKLFDGPDAMK---- 106
D + + L +W M GY ++C I+ F A+K
Sbjct: 191 DDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGN--FSISVALKACVD 248
Query: 107 ---------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTM 145
D V + L+ Y++ ++A ++F M ERNV +WN++
Sbjct: 249 LKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSL 308
Query: 146 IDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSECGRI----EDAQWHFNQMRER- 199
I ++ + + +LFR+M E + SW T+ L C R+ + H ++ +
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 200 --DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFER 257
DV +++D G V+ +R +FD M +++ SWN+M+ YA N ++E + LFE
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 258 MPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIF 317
M E +G +G IT+ A+++G GL+E L +F
Sbjct: 429 MIE----------SGVAPDG-----------------ITFVALLSGCSDTGLTEYGLSLF 461
Query: 318 NKLQADHALKP---NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALIN 373
+++ + + P + V +LG + ++ ++I F+ S + +L+N
Sbjct: 462 ERMKTEFRVSPALEHYACLVDILGRAGKI------KEAVKVIETMPFKPSASIWGSLLN 514
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 158/355 (44%), Gaps = 23/355 (6%)
Query: 78 LWGTMINGYIMCGVIKEARKLFDG--PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP 135
L +I + +C + ARK+FD ++ W A+ GY + +A ++ +M
Sbjct: 169 LLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDML 228
Query: 136 ERNVRSWNTMIDGYARNGQTEKAL--------DLFRRMPERNVVSWNTIIKALSECGRIE 187
+ N I + K L + +R + + V +N ++K E G +
Sbjct: 229 CSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFD 288
Query: 188 DAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV-VSWNVMIKGYAKNR 246
DA+ F+ M ER+V +W +++ L+ RV + LF +M + SW +
Sbjct: 289 DARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACS 348
Query: 247 RLDEAL-------ELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTA 299
R+ L ++ + + D+P N+L+ + + G++ + ++F M K++ +W
Sbjct: 349 RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNI 408
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
M+ Y +G EE + +F + + + P+ TFV +L CSD G + + + KT
Sbjct: 409 MLNCYAINGNIEEVINLF-EWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERM-KT 466
Query: 360 AFQESTYV--VSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
F+ S + + L+++ + G++ A ++ + + I W ++ + HG
Sbjct: 467 EFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASI-WGSLLNSCRLHG 520
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 19/261 (7%)
Query: 66 KLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIE 125
++ R + D ++ ++ Y+ G+ +ARK+FDG + ++VVTW +L++ K ++
Sbjct: 261 QIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGM-SERNVVTWNSLISVLSKKVRVH 319
Query: 126 EAERLFYEMPERNVR-SWNTMIDGYARNGQTEKAL-------DLFRRMPERNVVSWNTII 177
E LF +M E + SW T+ + L + + + +V N+++
Sbjct: 320 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLM 379
Query: 178 KALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV----V 233
+CG +E ++ F+ M +D+ SW M++ AING +++ LF+ M V +
Sbjct: 380 DMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 234 SWNVMIKGYAKNRRLDEALELFERMPE--RDMPS---WNTLVTGFIQNGDLNRAEKLFHE 288
++ ++ G + + L LFERM R P+ + LV + G + A K+
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Query: 289 MPQK-NVITWTAMMTGYVQHG 308
MP K + W +++ HG
Sbjct: 500 MPFKPSASIWGSLLNSCRLHG 520
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 108/244 (44%), Gaps = 17/244 (6%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVN 116
+ G DDARK+FD M ER++ W ++I+ + E LF +W L
Sbjct: 283 ESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTT 342
Query: 117 GYVKLNQI-------EEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERN 169
+++ E ++ + +V N+++D Y + G+ E + +F M ++
Sbjct: 343 ILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKD 402
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFD 225
+ SWN ++ + G IE+ F M E V ++ ++ G + G + LF+
Sbjct: 403 LASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFE 462
Query: 226 RMPVRNVVS-----WNVMIKGYAKNRRLDEALELFERMPERDMPS-WNTLVTGFIQNGDL 279
RM VS + ++ + ++ EA+++ E MP + S W +L+ +G++
Sbjct: 463 RMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNV 522
Query: 280 NRAE 283
+ E
Sbjct: 523 SVGE 526
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 115/257 (44%), Gaps = 15/257 (5%)
Query: 258 MPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIF 317
MP D+ + +T + + +N A+ F ++P + + + G + +EA+ +
Sbjct: 64 MPSLDVITPQAYLTP-LGSQSINHAK--FLQIPWRQFVFTKPL--GLSKSTKLDEAVTLI 118
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI-SKTAFQESTYVVSALINMYS 376
+ + + +L AC L+ G +I LI + + + + ++S LI ++S
Sbjct: 119 ENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFS 178
Query: 377 KCGELHIARRIFDE----GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
C L +AR+IFD+ LL ++ W M Y+ +G ++A+ ++ M +
Sbjct: 179 VCRRLDLARKIFDDVTDSSLLTEK---VWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPG 235
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII 492
+ + L AC + G +++K R +V + Y L+ L +G +A +
Sbjct: 236 NFSISVALKACVDLKDLRVGRGIHAQIVK-RKEKVDQVVYNVLLKLYMESGLFDDARKVF 294
Query: 493 EGLGVDLSLSVWGPLLA 509
+G+ + ++ W L++
Sbjct: 295 DGMS-ERNVVTWNSLIS 310
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 268 bits (686), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 245/500 (49%), Gaps = 49/500 (9%)
Query: 119 VKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNG--QTEKALDLFRRMPERNVVSWNTI 176
++L + A +F N + ++ Y+ + A FR M R+V N
Sbjct: 68 LRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHF 127
Query: 177 IKAL--------SECGRIEDAQWH-FNQMRERDVKSWTTMVDGLAIN-GRVDDARELFDR 226
I L S H F V T ++ A + + AR+LFD
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDE 187
Query: 227 MPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLF 286
M RNVVSW M+ GYA++ + A+ LFE MPERD+PSWN ++ QN
Sbjct: 188 MSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQN---------- 237
Query: 287 HEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGL 346
GL EA+ +F ++ + +++PN T V VL AC+ L
Sbjct: 238 ---------------------GLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL 276
Query: 347 NEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIA 406
+ IH + +V ++L+++Y KCG L A +F + ++ L +WN MI
Sbjct: 277 QLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK--MASKKSLTAWNSMIN 334
Query: 407 AYAHHGYGKEAINLFNKMQELG---FQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR 463
+A HG +EAI +F +M +L + + +T++ LL AC+H GLV +G YFD +
Sbjct: 335 CFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRF 394
Query: 464 SIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLV 523
I+ R +HY CL+DL GRAGR EA ++ + + ++WG LL C +HG+ D+ ++
Sbjct: 395 GIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVA 454
Query: 524 AKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQV 583
K ++ + P N G ++++N+Y +G W+EA R +K + K PG S +E+ N V
Sbjct: 455 VKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQ 514
Query: 584 FVVGDKSHSQSELLGYLLLD 603
F DKSH ++E + Y++LD
Sbjct: 515 FYSLDKSHPETEEI-YMILD 533
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 22/252 (8%)
Query: 108 VVTWTALVNGYVK-LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
VV TAL++ Y ++ I A +LF EM ERNV SW M+ GYAR+G A+ LF MP
Sbjct: 161 VVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMP 220
Query: 167 ERNVVSWNTIIKALSECGRIEDAQWHFNQM------RERDVKSWTTMVDGLAINGRVDDA 220
ER+V SWN I+ A ++ G +A F +M R +V + ++ A G + A
Sbjct: 221 ERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEV-TVVCVLSACAQTGTLQLA 279
Query: 221 REL----FDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQN 276
+ + + R +V N ++ Y K L+EA +F+ ++ + +WN+++ F +
Sbjct: 280 KGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALH 339
Query: 277 GDLNRAEKLFHEMPQKNV-------ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP- 328
G A +F EM + N+ IT+ ++ GL + F+ + ++P
Sbjct: 340 GRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPR 399
Query: 329 --NTGTFVTVLG 338
+ G + +LG
Sbjct: 400 IEHYGCLIDLLG 411
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 94/176 (53%), Gaps = 10/176 (5%)
Query: 92 IKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYAR 151
I AR+LFD ++VV+WTA+++GY + I A LF +MPER+V SWN ++ +
Sbjct: 178 ITLARQLFDEMSE-RNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQ 236
Query: 152 NGQTEKALDLFRRMPERNVVSWN--TIIKALSECGRIEDAQ-------WHFNQMRERDVK 202
NG +A+ LFRRM + N T++ LS C + Q + + + DV
Sbjct: 237 NGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVF 296
Query: 203 SWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM 258
++VD G +++A +F +++ +WN MI +A + R +EA+ +FE M
Sbjct: 297 VSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEM 352
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 140/306 (45%), Gaps = 34/306 (11%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA----RKLFDGPDAMKD 107
+S + G I +A LF+ MPERD+ W ++ G+ EA R++ + P +
Sbjct: 200 LSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPN 259
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS----WNTMIDGYARNGQTEKALDLFR 163
VT +++ + ++ A+ + R++ S N+++D Y + G E+A +F+
Sbjct: 260 EVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFK 319
Query: 164 RMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRE---RDVK----SWTTMVDGLAINGR 216
++++ +WN++I + GR E+A F +M + D+K ++ +++ G
Sbjct: 320 MASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGL 379
Query: 217 VDDARELFDRMPVR-----NVVSWNVMIKGYAKNRRLDEALELFERMPER-DMPSWNTLV 270
V R FD M R + + +I + R DEALE+ M + D W +L+
Sbjct: 380 VSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLL 439
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVIT-------WTAMMTG-YVQHGLSEEALKIFNKLQA 322
+G L+ A E+ KN++ + AMM Y + G EEA + ++
Sbjct: 440 NACKIHGHLDLA-----EVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKH 494
Query: 323 DHALKP 328
+A KP
Sbjct: 495 QNAYKP 500
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/421 (33%), Positives = 243/421 (57%), Gaps = 47/421 (11%)
Query: 220 ARELFDRM--PVRNVVSWNVMIKGYAKNRRLDEALELFERM-----PERDMPSWNTLV-- 270
A ++F ++ P+ NV WN +I+GYA+ A L+ M E D ++ L+
Sbjct: 72 AHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 271 -------------------TGF-----IQN---------GDLNRAEKLFHEMPQKNVITW 297
+GF +QN GD+ A K+F +MP+K+++ W
Sbjct: 131 VTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAW 190
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
+++ G+ ++G EEAL ++ ++ + +KP+ T V++L AC+ + L G+++H +
Sbjct: 191 NSVINGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI 249
Query: 358 KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEA 417
K + + + L+++Y++CG + A+ +FDE + ++ +SW +I A +G+GKEA
Sbjct: 250 KVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDE--MVDKNSVSWTSLIVGLAVNGFGKEA 307
Query: 418 INLFNKMQEL-GFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
I LF M+ G ++T+V +L ACSH G+V+EG +YF ++ + I+ R +H+ C+V
Sbjct: 308 IELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMV 367
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAG 536
DL RAG++K+A+ I+ + + ++ +W LL C VHG++D+ + +IL++EP ++G
Sbjct: 368 DLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSG 427
Query: 537 TYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSEL 596
Y LLSNMYAS +W + +R +M G+KK PG S VEVGN V F++GDKSH QS+
Sbjct: 428 DYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDA 487
Query: 597 L 597
+
Sbjct: 488 I 488
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 136/241 (56%), Gaps = 11/241 (4%)
Query: 279 LNRAEKLFHEMPQK-NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
++ A K+F ++ + NV W ++ GY + G S A ++ +++ ++P+T T+ ++
Sbjct: 69 MSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRD 397
A + +A + G+ IH ++ ++ F YV ++L+++Y+ CG++ A ++FD+ + ++D
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK--MPEKD 186
Query: 398 LISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ--- 454
L++WN +I +A +G +EA+ L+ +M G + + T V LL+AC+ G + G +
Sbjct: 187 LVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHV 246
Query: 455 YFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVH 514
Y K+ R++ L+DL R GR++EA + + + VD + W L+ G V+
Sbjct: 247 YMIKVGLTRNLHSSN----VLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVN 301
Query: 515 G 515
G
Sbjct: 302 G 302
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 158/344 (45%), Gaps = 52/344 (15%)
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNT-----IIKALSECGRIEDAQWH 192
NV WNT+I GYA G + A L+R M +V +T +IKA++ + +
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 193 FNQMRERDVKSWTTMVDGL----AINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRL 248
+ + S + + L A G V A ++FD+MP +++V+WN +I G+A+N +
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 249 DEALELFERM------PE---------------------------------RDMPSWNTL 269
+EAL L+ M P+ R++ S N L
Sbjct: 204 EEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVL 263
Query: 270 VTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
+ + + G + A+ LF EM KN ++WT+++ G +G +EA+++F +++ L P
Sbjct: 264 LDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC 323
Query: 330 TGTFVTVLGACSDLAGLNEG-QQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
TFV +L ACS + EG + ++ + + ++++ ++ G++ A +
Sbjct: 324 EITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE-Y 382
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
+ + Q +++ W ++ A H G + F ++Q L + N
Sbjct: 383 IKSMPMQPNVVIWRTLLGACTVH--GDSDLAEFARIQILQLEPN 424
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 26/280 (9%)
Query: 76 LHLWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM 134
+++ ++++ Y CG + A K+FD P+ KD+V W +++NG+ + + EEA L+ EM
Sbjct: 156 IYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 135 PERNVRSWNTMIDGYARNGQTEKALDLFRRMP--------ERNVVSWNTIIKALSECGRI 186
+ ++ I AL L +R+ RN+ S N ++ + CGR+
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 187 EDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM-PVRNVVSWNVMIKG--YA 243
E+A+ F++M +++ SWT+++ GLA+NG +A ELF M ++ + G YA
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 244 KNR--RLDEALELFERMPER-----DMPSWNTLVTGFIQNGDLNRAEKLFHEMP-QKNVI 295
+ + E E F RM E + + +V + G + +A + MP Q NV+
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN-TGTFV 334
W ++ HG S+ L F ++Q L+PN +G +V
Sbjct: 394 IWRTLLGACTVHGDSD--LAEFARIQILQ-LEPNHSGDYV 430
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 49/230 (21%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAMKDVVTW 111
G + A K+FD+MPE+DL W ++ING+ G +EA L+ PD V
Sbjct: 170 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 229
Query: 112 TA-------------------------------LVNGYVKLNQIEEAERLFYEMPERNVR 140
+A L++ Y + ++EEA+ LF EM ++N
Sbjct: 230 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 289
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERN-----VVSWNTIIKALSECGRIEDAQWHFNQ 195
SW ++I G A NG ++A++LF+ M +++ I+ A S CG +++ +F +
Sbjct: 290 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 349
Query: 196 MRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMI 239
MRE ++ + MVD LA G+V A E MP++ NVV W ++
Sbjct: 350 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 399
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 163/555 (29%), Positives = 277/555 (49%), Gaps = 57/555 (10%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
+D +L+N YVK + A +LF MPERNV SW M+ GY +G + L LF+ M
Sbjct: 67 EDAYQINSLINLYVKCRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSM 126
Query: 166 -----PERNVVSWNTIIKALSECGRIEDA-QWH-----FNQMRERDVKSWTTMVDGLAIN 214
N + K+ S GRIE+ Q+H + + V++ T+V ++
Sbjct: 127 FFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRN--TLVYMYSLC 184
Query: 215 GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWN------- 267
+A + D +P ++ ++ + GY + E L++ + D WN
Sbjct: 185 SGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDF-VWNNLTYLSS 243
Query: 268 ---------------------------------TLVTGFIQNGDLNRAEKLFHEMPQKNV 294
L+ + + G + A+++F + +N+
Sbjct: 244 LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNI 303
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
T +M Y Q EEAL +F+K+ + PN TF +L + ++L+ L +G +H
Sbjct: 304 FLNTTIMDAYFQDKSFEEALNLFSKMDTKE-VPPNEYTFAILLNSIAELSLLKQGDLLHG 362
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
L+ K+ ++ V +AL+NMY+K G + AR+ F + RD+++WN MI+ +HHG G
Sbjct: 363 LVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSG--MTFRDIVTWNTMISGCSHHGLG 420
Query: 415 KEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC 474
+EA+ F++M G N +T++ +L ACSH G VE+GL YF++L+K +Q HY C
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTC 480
Query: 475 LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPEN 534
+V L +AG K+A + + ++ + W LL C V N +GK VA+ ++ P +
Sbjct: 481 IVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPND 540
Query: 535 AGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQS 594
+G Y LLSN++A +W+ A VR M ++G+KK+PG SW+ + N VF+ D H +
Sbjct: 541 SGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEI 600
Query: 595 ELLGYLLLDLHTKMK 609
L+ + ++ +K+K
Sbjct: 601 TLIYAKVKEVMSKIK 615
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 140/325 (43%), Gaps = 73/325 (22%)
Query: 63 DARKLFDRMPERDLHLWGTMINGYIMCGVIKE----------------------ARKLFD 100
+A ++ D +P DL ++ + ++GY+ CG KE + +LF
Sbjct: 189 EAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFS 248
Query: 101 GPDAMK----------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT 144
+ +V AL+N Y K ++ A+R+F + +N+ T
Sbjct: 249 NLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTT 308
Query: 145 MIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMRERD 200
++D Y ++ E+AL+LF +M + V ++ ++ +++E ++ + +
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 201 VKSWT----TMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFE 256
++ +V+ A +G ++DAR+ F M R++V+WN MI G + + EALE F+
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFD 428
Query: 257 RMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKI 316
RM + TG E+P N IT+ ++ G E+ L
Sbjct: 429 RM----------IFTG---------------EIP--NRITFIGVLQACSHIGFVEQGLHY 461
Query: 317 FNKLQADHALKPNTGTFVTVLGACS 341
FN+L ++P+ + ++G S
Sbjct: 462 FNQLMKKFDVQPDIQHYTCIVGLLS 486
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 56/273 (20%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD 100
++ ++ C I+ + G++ A+++FD +++ L T+++ Y +EA LF
Sbjct: 268 FNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFS 327
Query: 101 GPDAMK--------------------------------------DVVTWTALVNGYVKLN 122
D + V+ ALVN Y K
Sbjct: 328 KMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSG 387
Query: 123 QIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTI 176
IE+A + F M R++ +WNTMI G + +G +AL+ F RM P R +++ +
Sbjct: 388 SIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNR--ITFIGV 445
Query: 177 IKALSECGRIEDAQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVR- 230
++A S G +E +FNQ+ ++ D++ +T +V L+ G DA + P+
Sbjct: 446 LQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEW 505
Query: 231 NVVSWNVMIKG--YAKNRRLDEALELF--ERMP 259
+VV+W ++ +N RL + + + E+ P
Sbjct: 506 DVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYP 538
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 270/525 (51%), Gaps = 29/525 (5%)
Query: 101 GPDAMKDVVTWTALVNGYVKLNQIEEAERLF----YEMPERNVRSWNTMIDGYARNGQTE 156
G D K V+ +L++ Y K + +E +F E + R N MI Y R G +
Sbjct: 155 GNDGTKFAVS--SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVAR--NAMIAAYCREGDID 210
Query: 157 KALDLFRRMPERN-VVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAIN- 214
KAL +F R PE N +SWNT+I ++ G E+A M E +K W G +N
Sbjct: 211 KALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLK-WDEHSFGAVLNV 269
Query: 215 ---------GRVDDARELFDRMPVRNVVSWNVMIKGYAK--NRRLDEALELFERMPERDM 263
G+ AR L + VS + + Y K N + E+ L ++
Sbjct: 270 LSSLKSLKIGKEVHARVLKNGSYSNKFVSSGI-VDVYCKCGNMKYAESAHLLYGFG--NL 326
Query: 264 PSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
S ++++ G+ G + A++LF + +KN++ WTAM GY+ + L++ A+
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIAN 386
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
P++ V+VLGACS A + G++IH +T +V+A ++MYSKCG +
Sbjct: 387 ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEY 446
Query: 384 ARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
A RIFD +RD + +N MIA AHHG+ ++ F M E GF+ +++T++ LL+AC
Sbjct: 447 AERIFDSSF--ERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSAC 504
Query: 444 SHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLG-VDLSLS 502
H GLV EG +YF +++ +I HY C++DL G+A RL +A ++EG+ V+
Sbjct: 505 RHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAV 564
Query: 503 VWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMK 562
+ G L C+ + N ++ K V +K+L IE N Y ++N YAS G+W E +R +M+
Sbjct: 565 ILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMR 624
Query: 563 DKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTK 607
K L+ GCSW + +F D SH ++E + Y +L TK
Sbjct: 625 GKELEIFSGCSWANIDKQFHMFTSSDISHYETEAI-YAMLHFVTK 668
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 200/487 (41%), Gaps = 115/487 (23%)
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR-MPE 167
V+ LVN Y K + EA +F EM ERNV SWN +I Y + ++A +LF E
Sbjct: 24 VSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCE 83
Query: 168 RNVVSWNTIIKALSECGRIE-DAQWHFNQMRER-------DVKSWTTMV----------- 208
R+++++NT++ ++ E +A F +M + D + TTMV
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 209 -------------DG--LAIN---------GRVDDARELFDRMPVRNV--VSWNVMIKGY 242
DG A++ G+ + +F+ V V V+ N MI Y
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 243 AKNRRLDEALELFERMPE-RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMM 301
+ +D+AL +F R PE D SWNTL+ G+ QN
Sbjct: 204 CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQN------------------------- 238
Query: 302 TGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAF 361
G EEALK+ ++ ++ LK + +F VL S L L G+++H + K
Sbjct: 239 ------GYEEEALKMAVSME-ENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGS 291
Query: 362 QESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLF 421
+ +V S ++++Y KCG + A L +L S + MI Y+ G EA LF
Sbjct: 292 YSNKFVSSGIVDVYCKCGNMKYAESA--HLLYGFGNLYSASSMIVGYSSQGKMVEAKRLF 349
Query: 422 NKMQE----------LG----------------FQAND------VTYVELLTACSHAGLV 449
+ + E LG F AN+ + V +L ACS +
Sbjct: 350 DSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYM 409
Query: 450 EEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLA 509
E G + L+ I + + VD+ + G ++ A I + + ++ ++A
Sbjct: 410 EPGKEIHGHSLRT-GILMDKKLVTAFVDMYSKCGNVEYAERIFDS-SFERDTVMYNAMIA 467
Query: 510 GCNVHGN 516
GC HG+
Sbjct: 468 GCAHHGH 474
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 156/384 (40%), Gaps = 85/384 (22%)
Query: 81 TMINGYIMCGVIKEARKLFDGPDA-MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERN- 138
++I+ Y CG KE +F+G D V A++ Y + I++A +F+ PE N
Sbjct: 165 SLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELND 224
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNT----------------------- 175
SWNT+I GYA+NG E+AL + M E N + W+
Sbjct: 225 TISWNTLIAGYAQNGYEEEALKMAVSM-EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVH 283
Query: 176 -----------------IIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVD 218
I+ +CG ++ A+ ++ S ++M+ G + G++
Sbjct: 284 ARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMV 343
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNT---------- 268
+A+ LFD + +N+V W M GY R+ D LEL + + ++
Sbjct: 344 EAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGAC 403
Query: 269 --------------------------LVTGFI----QNGDLNRAEKLFHEMPQKNVITWT 298
LVT F+ + G++ AE++F +++ + +
Sbjct: 404 SLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYN 463
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ-IHQLIS 357
AM+ G HG ++ + F + + KP+ TF+ +L AC + EG++ +I
Sbjct: 464 AMIAGCAHHGHEAKSFQHFEDM-TEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIE 522
Query: 358 KTAFQESTYVVSALINMYSKCGEL 381
T + +I++Y K L
Sbjct: 523 AYNISPETGHYTCMIDLYGKAYRL 546
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 143/340 (42%), Gaps = 28/340 (8%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMC----GVIKEARKLFDGPDAMKDVVTWT 112
+G++ +A++LFD + E++L +W M GY+ V++ AR D +
Sbjct: 338 SQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMV 397
Query: 113 ALVNGYVKLNQIEEAERLFYEMPER-----NVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
+++ G L E + + R + + +D Y++ G E A +F E
Sbjct: 398 SVL-GACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFE 456
Query: 168 RNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDAREL 223
R+ V +N +I + G + HF M E K ++ ++ G V + +
Sbjct: 457 RDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKY 516
Query: 224 FDRMPVRNVVS-----WNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGD 278
F M +S + MI Y K RLD+A+EL E + + + + ++ F+
Sbjct: 517 FKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDA--VILGAFLNACS 574
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQ-ADHALKPNTGTFVTVL 337
N+ +L E+ +K ++ + + Y+Q + + ++++Q H ++ G + +
Sbjct: 575 WNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMR---GKELEIF 631
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
CS N +Q H S T + A+++ +K
Sbjct: 632 SGCS---WANIDKQFHMFTSSDISHYETEAIYAMLHFVTK 668
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/483 (31%), Positives = 264/483 (54%), Gaps = 37/483 (7%)
Query: 118 YVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSW 173
++ + I A ++F E+PE +V S +I + + + +A F+R+ N ++
Sbjct: 37 HIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF 96
Query: 174 NTIIKALSECGRIE-DAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV 232
T+I + + ++ Q H ++ GLA N V A
Sbjct: 97 GTVIGSSTTSRDVKLGKQLHCYALKM-----------GLASNVFVGSA------------ 133
Query: 233 VSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK 292
++ Y K L +A F+ + ++ S L++G+++ + A LF MP++
Sbjct: 134 -----VLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPER 188
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
+V+TW A++ G+ Q G +EEA+ F + + + PN TF + A S++A G+ I
Sbjct: 189 SVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSI 248
Query: 353 HQLISKTAFQE-STYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHH 411
H K + + +V ++LI+ YSKCG + + F++ QR+++SWN MI YAH+
Sbjct: 249 HACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHN 308
Query: 412 GYGKEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQ--VR 468
G G+EA+ +F KM ++ + N+VT + +L AC+HAGL++EG YF+K + + +
Sbjct: 309 GRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPNLLE 368
Query: 469 EDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 528
+HYAC+VD+ R+GR KEA +I+ + +D + W LL GC +H N + KL A KIL
Sbjct: 369 LEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKIL 428
Query: 529 KIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGD 588
+++P + +Y +LSN Y+++ W+ + +R KMK+ GLK+ GCSW+EV + ++VFV D
Sbjct: 429 ELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNAD 488
Query: 589 KSH 591
K++
Sbjct: 489 KNN 491
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 142/317 (44%), Gaps = 50/317 (15%)
Query: 52 ISRLCQEGRIDDARKLFDRM----PERDLHLWGTMINGYIMCGVIKEARKLFDGPDAM-- 105
I R +E R +A + F R+ + +GT+I +K ++L M
Sbjct: 65 IGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGL 124
Query: 106 -KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
+V +A++N YVKL+ + +A R F + + NV S +I GY + + E+AL LFR
Sbjct: 125 ASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRA 184
Query: 165 MPERNVVSWNTIIKALSECGRIEDAQWHFNQM--------RERDVKSWTTMVDGLAINGR 216
MPER+VV+WN +I S+ GR E+A F M E T + +A +G
Sbjct: 185 MPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGA 244
Query: 217 VDDARELFDRMPVR--NVVSWNVMIKGYAKNRRLDEALELFERMPE--RDMPSWNTLVTG 272
+ + NV WN +I Y+K ++++L F ++ E R++ SWN+++ G
Sbjct: 245 GKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWG 304
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+ NG EEA+ +F K+ D L+PN T
Sbjct: 305 YAHNGR-------------------------------GEEAVAMFEKMVKDTNLRPNNVT 333
Query: 333 FVTVLGACSDLAGLNEG 349
+ VL AC+ + EG
Sbjct: 334 ILGVLFACNHAGLIQEG 350
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 265 bits (678), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 184/651 (28%), Positives = 325/651 (49%), Gaps = 101/651 (15%)
Query: 36 TSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGY----IMCGV 91
++TS S + N + + GR D+A +F+ + + D+ W T+++G+ I
Sbjct: 102 STTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNF 161
Query: 92 I---KEARKLFD------------GPDAM----------------KDVVTWTALVNGYVK 120
+ K A +FD G + D+V + + Y +
Sbjct: 162 VVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSR 221
Query: 121 LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTE-KALDLFRRMPERNV----VSWNT 175
A R+F EM +++ SWN+++ G ++ G +A+ +FR M V VS+ +
Sbjct: 222 SGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTS 281
Query: 176 IIKAL-----------------------------------SECGRIEDAQWHFNQMRERD 200
+I S+CG +E + F+QM ER+
Sbjct: 282 VITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERN 341
Query: 201 VKSWTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFE 256
V SWTTM I+ DDA +F M V V++ +I N ++ E L++
Sbjct: 342 VVSWTTM-----ISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHG 396
Query: 257 RMPERDMPS----WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
+ S N+ +T + + L A+K F ++ + +I+W AM++G+ Q+G S E
Sbjct: 397 LCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHE 456
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACS---DLAGLNEGQQIHQLISKTAFQESTYVVS 369
ALK+F L A PN TF +VL A + D++ + +GQ+ H + K V S
Sbjct: 457 ALKMF--LSAAAETMPNEYTFGSVLNAIAFAEDIS-VKQGQRCHAHLLKLGLNSCPVVSS 513
Query: 370 ALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGF 429
AL++MY+K G + + ++F+E + Q++ W +I+AY+ HG + +NLF+KM +
Sbjct: 514 ALLDMYAKRGNIDESEKVFNE--MSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENV 571
Query: 430 QANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAF 489
+ VT++ +LTAC+ G+V++G + F+ +++ +++ +HY+C+VD+ GRAGRLKEA
Sbjct: 572 APDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAE 631
Query: 490 NIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVG 549
++ + S+ +L C +HGN +G VA+ ++++PE +G+Y + N+YA
Sbjct: 632 ELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKE 691
Query: 550 KWKEAANVRMKMKDKGLKKQPGCSWVEVGN-----TVQVFVVGDKSHSQSE 595
+W +AA +R M+ K + K+ G SW++VG+ T+Q F GDKSH +S+
Sbjct: 692 EWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSD 742
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 30/246 (12%)
Query: 282 AEKLFHEMPQKNVITWTAMMTGYVQHGLSEE--------ALKIFNK-LQADH-ALKPNTG 331
A KLF Q+N T + H +SE AL IF + LQ + +
Sbjct: 27 AHKLFDGSSQRNATT-------SINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEV 79
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
T L AC L G QIH + + F V +A++ MY K G A IF+
Sbjct: 80 TLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN- 136
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEE 451
L D++SWN +++ + + + A+N +M+ G + TY L+ C +
Sbjct: 137 -LVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLL 192
Query: 452 GLQYFDKLLKN--RSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLA 509
GLQ ++K S V + + + + R+G + A + + + +S W LL+
Sbjct: 193 GLQLQSTVVKTGLESDLVVGNSF---ITMYSRSGSFRGARRVFDEMSFKDMIS-WNSLLS 248
Query: 510 GCNVHG 515
G + G
Sbjct: 249 GLSQEG 254
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/578 (28%), Positives = 299/578 (51%), Gaps = 72/578 (12%)
Query: 70 RMPERDLHLWGTMINGYIMCGVIKEARKLF--DGPDAMKDVVTWTALVNGYVKLNQIEEA 127
R +R ++ G I+G+++ RK F D P A T+LVN Y K + A
Sbjct: 69 RCAQRKDYVSGQQIHGFMV-------RKGFLDDSPRA------GTSLVNMYAKCGLMRRA 115
Query: 128 ERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIKALSEC 183
L + ER+V +N +I G+ NG A++ +R M ++ ++ +++K S+
Sbjct: 116 V-LVFGGSERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDA 173
Query: 184 GRIEDAQ----WHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRN-VVSWNVM 238
+ D + F + D + +V + V+DA+++FD +P R+ V WN +
Sbjct: 174 MELSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNAL 233
Query: 239 IKGYAKNRRLDEALELFERMPERDMP----SWNTLVTGFIQNGD---------------- 278
+ GY++ R ++AL +F +M E + + ++++ F +GD
Sbjct: 234 VNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGS 293
Query: 279 -------------------LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
L A +F M ++++ TW +++ + G + L +F +
Sbjct: 294 GSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFER 353
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH--QLISKTAFQEST--YVVSALINMY 375
+ ++P+ T TVL C LA L +G++IH ++S ++S+ ++ ++L++MY
Sbjct: 354 MLCS-GIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMY 412
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
KCG+L AR +FD +R +D SWN MI Y G+ A+++F+ M G + +++T
Sbjct: 413 VKCGDLRDARMVFDS--MRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEIT 470
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
+V LL ACSH+G + EG + ++ +I DHYAC++D+ GRA +L+EA+ +
Sbjct: 471 FVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISK 530
Query: 496 GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAA 555
+ + VW +L+ C +HGN D+ + K++ ++EPE+ G Y L+SN+Y GK++E
Sbjct: 531 PICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVL 590
Query: 556 NVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQ 593
+VR M+ + +KK PGCSW+ + N V F G+++H +
Sbjct: 591 DVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPE 628
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 202/476 (42%), Gaps = 54/476 (11%)
Query: 23 FIINGYPFLRTMSTSTSSLHSAMKDCNT--SISRLCQEGRIDDARKL----FDRMPERDL 76
F++NG P + + + D T S+ + + D +K+ F + D
Sbjct: 136 FVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVKKVHGLAFKLGFDSDC 195
Query: 77 HLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE 136
++ ++ Y +++A+K+FD D V W ALVNGY ++ + E+A +F +M E
Sbjct: 196 YVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMRE 255
Query: 137 RNV----RSWNTMIDGYARNGQTEKALDL----FRRMPERNVVSWNTIIKALSECGRIED 188
V + +++ + +G + + + ++V N +I + +E+
Sbjct: 256 EGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEE 315
Query: 189 AQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAK 244
A F M ERD+ +W +++ G D LF+RM ++V+ ++ +
Sbjct: 316 ANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGR 375
Query: 245 NRRLDEALELFERMPERDMPS--------WNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
L + E+ M + + N+L+ +++ GDL A +F M K+ +
Sbjct: 376 LASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSAS 435
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ-IHQL 355
W M+ GY E AL +F+ + +KP+ TFV +L ACS LNEG+ + Q+
Sbjct: 436 WNIMINGYGVQSCGELALDMFSCM-CRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQM 494
Query: 356 ISKTAFQESTYVVSALINMYSKCG------ELHIARRIFDEGLLRQRDLISWNGMIAAYA 409
+ ++ + +I+M + EL I++ I D ++ W ++++
Sbjct: 495 ETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVV-------WRSILSSCR 547
Query: 410 HHGYGKEAINLFNKMQEL------GFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
HG A+ ++ EL G+ YVE AG EE L D +
Sbjct: 548 LHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVE-------AGKYEEVLDVRDAM 596
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAF-QESTYVVSALINMYSKCGELHIARRI 387
N T + L C+ GQQIH + + F +S ++L+NMY+KCG + A +
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 388 FDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
F +RD+ +N +I+ + +G +A+ + +M+ G + T+ LL
Sbjct: 119 FGGS---ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLL 168
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 275/510 (53%), Gaps = 46/510 (9%)
Query: 114 LVNGYVKLNQIEEAERLFY--EMPERNVR----SWNTMIDGYARNGQTEKALDLFRRM-- 165
LV +VK + + + L Y ++ +R+ + + N+MI + ++ EK+ D +RR+
Sbjct: 40 LVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILS 99
Query: 166 ------PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDD 219
P+ V N +++A + +MRE ++ V G+ I
Sbjct: 100 SGNDLKPDNYTV--NFLVQACTGL-----------RMRETGLQ-----VHGMTI------ 135
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDL 279
R FD P +I YA+ LD ++F +P D +VT + GD+
Sbjct: 136 -RRGFDNDPHVQ----TGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDV 190
Query: 280 NRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
A KLF MP+++ I W AM++GY Q G S EAL +F+ +Q + +K N ++VL A
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE-GVKVNGVAMISVLSA 249
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
C+ L L++G+ H I + + + + + L+++Y+KCG++ A +F + ++++
Sbjct: 250 CTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVF--WGMEEKNVY 307
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
+W+ + A +G+G++ + LF+ M++ G N VT+V +L CS G V+EG ++FD +
Sbjct: 308 TWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM 367
Query: 460 LKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADI 519
I+ + +HY CLVDL RAGRL++A +II+ + + +VW LL ++ N ++
Sbjct: 368 RNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLEL 427
Query: 520 GKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGN 579
G L +KK+L++E N G Y LLSN+YA W ++VR MK KG++KQPGCS +EV
Sbjct: 428 GVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNG 487
Query: 580 TVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
V F VGDKSH + + + D+ +++
Sbjct: 488 EVHEFFVGDKSHPKYTQIDAVWKDISRRLR 517
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 49/262 (18%)
Query: 48 CNTSISRLCQE-GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DG 101
C T++ C G + ARKLF+ MPERD W MI+GY G +EA +F +G
Sbjct: 176 CRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEG 235
Query: 102 PD----AMKDVVT------------W-----------------TALVNGYVKLNQIEEAE 128
AM V++ W T LV+ Y K +E+A
Sbjct: 236 VKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAM 295
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECG 184
+F+ M E+NV +W++ ++G A NG EK L+LF M + N V++ ++++ S G
Sbjct: 296 EVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVG 355
Query: 185 RIEDAQWHFNQMR-----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVM 238
+++ Q HF+ MR E ++ + +VD A GR++DA + +MP++ + W+ +
Sbjct: 356 FVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSL 415
Query: 239 IKGYAKNRRLDEALELFERMPE 260
+ + L+ + ++M E
Sbjct: 416 LHASRMYKNLELGVLASKKMLE 437
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 141/294 (47%), Gaps = 30/294 (10%)
Query: 65 RKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQI 124
R+ FD P H+ +I+ Y G + K+F+ D V TA+V + +
Sbjct: 136 RRGFDNDP----HVQTGLISLYAELGCLDSCHKVFNSIPC-PDFVCRTAMVTACARCGDV 190
Query: 125 EEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKAL 180
A +LF MPER+ +WN MI GYA+ G++ +AL++F M + N V+ +++ A
Sbjct: 191 VFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSAC 250
Query: 181 SECGRIEDAQWHFNQMRERDVKSW----TTMVDGLAINGRVDDARELFDRMPVRNVVSWN 236
++ G ++ +W + + +K TT+VD A G ++ A E+F M +NV +W+
Sbjct: 251 TQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWS 310
Query: 237 VMIKGYAKNRRLDEALELFERMPERDM-PSWNTLVT--------GFIQNGD--LNRAEKL 285
+ G A N ++ LELF M + + P+ T V+ GF+ G +
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNE 370
Query: 286 FHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
F PQ + + ++ Y + G E+A+ I ++ +KP+ + ++L A
Sbjct: 371 FGIEPQ--LEHYGCLVDLYARAGRLEDAVSIIQQM----PMKPHAAVWSSLLHA 418
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 129/271 (47%), Gaps = 56/271 (20%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVT 110
IS + G +D K+F+ +P D M+ CG + ARKLF+G P+ +D +
Sbjct: 150 ISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPE--RDPIA 207
Query: 111 WTALVNGYVKLNQIEEAERLFYEMP----------------------------------E 136
W A+++GY ++ + EA +F+ M E
Sbjct: 208 WNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIE 267
Query: 137 RN-----VRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQW 191
RN VR T++D YA+ G EKA+++F M E+NV +W++ + L+ G E
Sbjct: 268 RNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLE 327
Query: 192 HFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVRN-------VVSWNVMIK 240
F+ M++ V ++ +++ G ++ G VD+ + FD M RN + + ++
Sbjct: 328 LFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSM--RNEFGIEPQLEHYGCLVD 385
Query: 241 GYAKNRRLDEALELFERMPERDMPS-WNTLV 270
YA+ RL++A+ + ++MP + + W++L+
Sbjct: 386 LYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 271/528 (51%), Gaps = 65/528 (12%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARN-GQTEKALDLFRRM------P 166
L+ V+L + LF E N S+N MI G E AL L+RRM P
Sbjct: 71 LIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKP 130
Query: 167 ERNVVSWNTIIKALSECGRIEDA-------QWHFNQMRERDVKSWTTMVDGLAINGRVDD 219
++ ++N + A C ++E+ F ERDV +++ A G+V
Sbjct: 131 DK--FTYNFVFIA---CAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGY 185
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNTLV-------- 270
AR+LFD + R+ VSWN MI GY++ +A++LF +M E P TLV
Sbjct: 186 ARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 271 -----TG-------------------------FIQNGDLNRAEKLFHEMPQKNVITWTAM 300
TG + + GDL+ A ++F++M +K+ + WTAM
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 305
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
+T Y Q+G S EA K+F +++ + P+ GT TVL AC + L G+QI S+ +
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKT-GVSPDAGTLSTVLSACGSVGALELGKQIETHASELS 364
Query: 361 FQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINL 420
Q + YV + L++MY KCG + A R+F+ + ++ +WN MI AYAH G+ KEA+ L
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEA--MPVKNEATWNAMITAYAHQGHAKEALLL 422
Query: 421 FNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCG 480
F++M +D+T++ +L+AC HAGLV +G +YF ++ + + +HY ++DL
Sbjct: 423 FDRMS---VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLS 479
Query: 481 RAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKI-EPENAGTYS 539
RAG L EA+ +E + +L C+ + I + + ++++ E +NAG Y
Sbjct: 480 RAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYV 539
Query: 540 LLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVG 587
+ SN+ A + W E+A +R M+D+G+ K PGCSW+E+ + F+ G
Sbjct: 540 ISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAG 587
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 159/326 (48%), Gaps = 38/326 (11%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQH-GLSEEALKIFNKLQADHA 325
N L+ ++ GD N + LF + N ++ M+ G E AL ++ +++
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFS-G 127
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
LKP+ T+ V AC+ L + G+ +H + K + ++ +LI MY+KCG++ AR
Sbjct: 128 LKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYAR 187
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
++FDE + +RD +SWN MI+ Y+ GY K+A++LF KM+E GF+ ++ T V +L ACSH
Sbjct: 188 KLFDE--ITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSH 245
Query: 446 AG------LVEE-------GLQYF--DKLLK---------------NRSIQVREDHYACL 475
G L+EE GL F KL+ N+ I+ + +
Sbjct: 246 LGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAM 305
Query: 476 VDLCGRAGRLKEAFNI---IEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP 532
+ + + G+ EAF + +E GV +L+ C G ++GK + ++
Sbjct: 306 ITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSL 365
Query: 533 E-NAGTYSLLSNMYASVGKWKEAANV 557
+ N + L +MY G+ +EA V
Sbjct: 366 QHNIYVATGLVDMYGKCGRVEEALRV 391
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 148/324 (45%), Gaps = 52/324 (16%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
+DV +L+ Y K Q+ A +LF E+ ER+ SWN+MI GY+ G + A+DLFR+M
Sbjct: 165 RDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKM 224
Query: 166 PERNV-VSWNTIIKALSECGRIEDAQWH--FNQMRERDVKSWTTMVDGLAIN-----GRV 217
E T++ L C + D + +M +T + I+ G +
Sbjct: 225 EEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDL 284
Query: 218 DDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNTL------- 269
D AR +F++M ++ V+W MI Y++N + EA +LF M + + P TL
Sbjct: 285 DSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSAC 344
Query: 270 ---------------------------VTGFI----QNGDLNRAEKLFHEMPQKNVITWT 298
TG + + G + A ++F MP KN TW
Sbjct: 345 GSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWN 404
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG-QQIHQLIS 357
AM+T Y G ++EAL +F+++ ++ P+ TF+ VL AC +++G + H++ S
Sbjct: 405 AMITAYAHQGHAKEALLLFDRM----SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSS 460
Query: 358 KTAFQESTYVVSALINMYSKCGEL 381
+ +I++ S+ G L
Sbjct: 461 MFGLVPKIEHYTNIIDLLSRAGML 484
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 99/225 (44%), Gaps = 52/225 (23%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-------DGPDA 104
IS + G +D AR++F++M ++D W MI Y G EA KLF PDA
Sbjct: 275 ISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDA 334
Query: 105 -------------------------------MKDVVTWTALVNGYVKLNQIEEAERLFYE 133
++ T LV+ Y K ++EEA R+F
Sbjct: 335 GTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEA 394
Query: 134 MPERNVRSWNTMIDGYARNGQTEKALDLFRRM--PERNVVSWNTIIKALSEC---GRIED 188
MP +N +WN MI YA G ++AL LF RM P ++ T I LS C G +
Sbjct: 395 MPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDI----TFIGVLSACVHAGLVHQ 450
Query: 189 AQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRMP 228
+F++M ++ +T ++D L+ G +D+A E +R P
Sbjct: 451 GCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFP 495
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 272/482 (56%), Gaps = 24/482 (4%)
Query: 146 IDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWH------FNQMRER 199
I+ + G A +F P N NT+I+ALS +++ H + ++
Sbjct: 54 IEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALS---LLDEPNAHSIAITVYRKLWAL 110
Query: 200 DVKSWT-TMVDGLAINGRVDD---ARELFDRMPV----RNVVSWNVMIKGYAKNRRLDEA 251
K T T L I RV D R++ ++ V +V +I+ Y L +A
Sbjct: 111 CAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDA 170
Query: 252 LELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP--QKNVITWTAMMTGYVQHGL 309
++F+ M +D+ WN L+ G+ + G+++ A L MP +N ++WT +++GY + G
Sbjct: 171 RKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGR 230
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS 369
+ EA+++F ++ ++ ++P+ T + VL AC+DL L G++I + + + +
Sbjct: 231 ASEAIEVFQRMLMEN-VEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNN 289
Query: 370 ALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGF 429
A+I+MY+K G + A +F+ + +R++++W +IA A HG+G EA+ +FN+M + G
Sbjct: 290 AVIDMYAKSGNITKALDVFE--CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGV 347
Query: 430 QANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAF 489
+ NDVT++ +L+ACSH G V+ G + F+ + I +HY C++DL GRAG+L+EA
Sbjct: 348 RPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREAD 407
Query: 490 NIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVG 549
+I+ + + ++WG LLA NVH + ++G+ +++K+EP N+G Y LL+N+Y+++G
Sbjct: 408 EVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLG 467
Query: 550 KWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLL--LDLHTK 607
+W E+ +R MK G+KK G S +EV N V F+ GD +H Q E + +L +DL +
Sbjct: 468 RWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQ 527
Query: 608 MK 609
K
Sbjct: 528 SK 529
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 177/373 (47%), Gaps = 50/373 (13%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
+ +H+ +I Y CG + +ARK+FD +KDV W AL+ GY K+ +++EA L
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFD-EMLVKDVNVWNALLAGYGKVGEMDEARSLLE 206
Query: 133 EMP--ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRI 186
MP RN SW +I GYA++G+ +A+++F+RM NV V+ ++ A ++ G +
Sbjct: 207 MMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSL 266
Query: 187 EDAQWHFNQMRERDVKSWTTM----VDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGY 242
E + + + R + ++ +D A +G + A ++F+ + RNVV+W +I G
Sbjct: 267 ELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGL 326
Query: 243 AKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMT 302
A + EAL +F RM + + + N +T+ A+++
Sbjct: 327 ATHGHGAEALAMFNRMVKAGV---------------------------RPNDVTFIAILS 359
Query: 303 GYVQHGLSEEALKIFNKLQADHALKPNT---GTFVTVLGACSDLAGLNEGQQIHQLISKT 359
G + ++FN +++ + + PN G + +LG L ++ ++I
Sbjct: 360 ACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKL------READEVIKSM 413
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAA--YAHHGYGKEA 417
F+ + + +L+ + +L + R E L++ S N M+ A Y++ G E+
Sbjct: 414 PFKANAAIWGSLLAASNVHHDLELGERALSE-LIKLEPNNSGNYMLLANLYSNLGRWDES 472
Query: 418 INLFNKMQELGFQ 430
+ N M+ +G +
Sbjct: 473 RMMRNMMKGIGVK 485
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 50/281 (17%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-GPDAMKDVVTWTALVNG 117
G + DARK+FD M +D+++W ++ GY G + EAR L + P +++ V+WT +++G
Sbjct: 165 GGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISG 224
Query: 118 YVKLNQIEEAERLFYEMPERNVR--------------------------SW--------- 142
Y K + EA +F M NV S+
Sbjct: 225 YAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRA 284
Query: 143 ----NTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRE 198
N +ID YA++G KALD+F + ERNVV+W TII L+ G +A FN+M +
Sbjct: 285 VSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVK 344
Query: 199 RDVK----SWTTMVDGLAINGRVDDARELFDRMPVR-----NVVSWNVMIKGYAKNRRLD 249
V+ ++ ++ + G VD + LF+ M + N+ + MI + +L
Sbjct: 345 AGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLR 404
Query: 250 EALELFERMP-ERDMPSWNTLVTGFIQNGDLNRAEKLFHEM 289
EA E+ + MP + + W +L+ + DL E+ E+
Sbjct: 405 EADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSEL 445
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 121/332 (36%), Positives = 213/332 (64%), Gaps = 4/332 (1%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
N+L+ + GD+ A K+F +MP+K+++ W +++ G+ ++G EEAL ++ ++ + +
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK-GI 85
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
KP+ T V++L AC+ + L G+++H + K + + + L+++Y++CG + A+
Sbjct: 86 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKT 145
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL-GFQANDVTYVELLTACSH 445
+FDE + ++ +SW +I A +G+GKEAI LF M+ G ++T+V +L ACSH
Sbjct: 146 LFDE--MVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSH 203
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWG 505
G+V+EG +YF ++ + I+ R +H+ C+VDL RAG++K+A+ I+ + + ++ +W
Sbjct: 204 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWR 263
Query: 506 PLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 565
LL C VHG++D+ + +IL++EP ++G Y LLSNMYAS +W + +R +M G
Sbjct: 264 TLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDG 323
Query: 566 LKKQPGCSWVEVGNTVQVFVVGDKSHSQSELL 597
+KK PG S VEVGN V F++GDKSH QS+ +
Sbjct: 324 VKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAI 355
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 139/280 (49%), Gaps = 26/280 (9%)
Query: 76 LHLWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM 134
+++ ++++ Y CG + A K+FD P+ KD+V W +++NG+ + + EEA L+ EM
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPE--KDLVAWNSVINGFAENGKPEEALALYTEM 80
Query: 135 PERNVRSWNTMIDGYARNGQTEKALDLFRRMP--------ERNVVSWNTIIKALSECGRI 186
+ ++ I AL L +R+ RN+ S N ++ + CGR+
Sbjct: 81 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
Query: 187 EDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM-PVRNVVSWNVMIKG--YA 243
E+A+ F++M +++ SWT+++ GLA+NG +A ELF M ++ + G YA
Sbjct: 141 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Query: 244 KNR--RLDEALELFERMPER-----DMPSWNTLVTGFIQNGDLNRAEKLFHEMP-QKNVI 295
+ + E E F RM E + + +V + G + +A + MP Q NV+
Sbjct: 201 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 260
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN-TGTFV 334
W ++ HG S+ L F ++Q L+PN +G +V
Sbjct: 261 IWRTLLGACTVHGDSD--LAEFARIQILQ-LEPNHSGDYV 297
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 49/230 (21%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAMKDVVTW 111
G + A K+FD+MPE+DL W ++ING+ G +EA L+ PD V
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 96
Query: 112 TA-------------------------------LVNGYVKLNQIEEAERLFYEMPERNVR 140
+A L++ Y + ++EEA+ LF EM ++N
Sbjct: 97 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 156
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERN-----VVSWNTIIKALSECGRIEDAQWHFNQ 195
SW ++I G A NG ++A++LF+ M +++ I+ A S CG +++ +F +
Sbjct: 157 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 216
Query: 196 MRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMI 239
MRE ++ + MVD LA G+V A E MP++ NVV W ++
Sbjct: 217 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 122/258 (47%), Gaps = 43/258 (16%)
Query: 215 GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM------PE-------- 260
G V A ++FD+MP +++V+WN +I G+A+N + +EAL L+ M P+
Sbjct: 37 GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLL 96
Query: 261 -------------------------RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI 295
R++ S N L+ + + G + A+ LF EM KN +
Sbjct: 97 SACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSV 156
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG-QQIHQ 354
+WT+++ G +G +EA+++F +++ L P TFV +L ACS + EG + +
Sbjct: 157 SWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRR 216
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
+ + + ++++ ++ G++ A + + + Q +++ W ++ A H G
Sbjct: 217 MREEYKIEPRIEHFGCMVDLLARAGQVKKAYE-YIKSMPMQPNVVIWRTLLGACTVH--G 273
Query: 415 KEAINLFNKMQELGFQAN 432
+ F ++Q L + N
Sbjct: 274 DSDLAEFARIQILQLEPN 291
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 100/176 (56%), Gaps = 10/176 (5%)
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWN 402
+A + G+ IH ++ ++ F YV ++L+++Y+ CG++ A ++FD+ + ++DL++WN
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK--MPEKDLVAWN 58
Query: 403 GMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ---YFDKL 459
+I +A +G +EA+ L+ +M G + + T V LL+AC+ G + G + Y K+
Sbjct: 59 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 460 LKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
R++ L+DL R GR++EA + + + VD + W L+ G V+G
Sbjct: 119 GLTRNLHSSN----VLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLIVGLAVNG 169
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 126/337 (37%), Positives = 221/337 (65%), Gaps = 8/337 (2%)
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
LVT + + GD+ A ++F MP+K+++ W ++++G+ Q+GL++EA+++F +++ + +P
Sbjct: 148 LVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR-ESGFEP 206
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
++ TFV++L AC+ ++ G +HQ I + + +ALIN+YS+CG++ AR +F
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE-LGFQANDVTYVELLTACSHAG 447
D+ +++ ++ +W MI+AY HGYG++A+ LFNKM++ G N+VT+V +L+AC+HAG
Sbjct: 267 DK--MKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAG 324
Query: 448 LVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSLSVW 504
LVEEG + ++ K+ + +H+ C+VD+ GRAG L EA+ I L G + ++W
Sbjct: 325 LVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALW 384
Query: 505 GPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 564
+L C +H N D+G +AK+++ +EP+N G + +LSN+YA GK E +++R M
Sbjct: 385 TAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRN 444
Query: 565 GLKKQPGCSWVEVGNTVQVFVVGDKSHSQS-ELLGYL 600
L+KQ G S +EV N +F +GD+SH ++ E+ YL
Sbjct: 445 NLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYL 481
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 134/255 (52%), Gaps = 21/255 (8%)
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
+ P+ TF +V+ +C+DL+ L G+ +H + F TYV +AL+ YSKCG++ AR
Sbjct: 103 VSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGAR 162
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
++FD + ++ +++WN +++ + +G EAI +F +M+E GF+ + T+V LL+AC+
Sbjct: 163 QVFDR--MPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQ 220
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL---CGRAGRLKEAFNIIEGLGVDLSLS 502
G V G + + + + + + L++L CG G+ +E F+ ++ + +++
Sbjct: 221 TGAVSLG-SWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK----ETNVA 275
Query: 503 VWGPLLAGCNVHGNADIGKLVAKKILKIE------PENAGTYSLLSNMYASVGKWKEAAN 556
W +++ HG G+ + K+E P N ++LS A G +E +
Sbjct: 276 AWTAMISAYGTHG---YGQQAVELFNKMEDDCGPIPNNVTFVAVLSAC-AHAGLVEEGRS 331
Query: 557 VRMKMKDKGLKKQPG 571
V +M K + PG
Sbjct: 332 VYKRMT-KSYRLIPG 345
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 35/258 (13%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
D ALV Y K +E A ++F MPE+++ +WN+++ G+ +NG ++A+ +F +M
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMR 200
Query: 167 ER----NVVSWNTIIKALSECGRIEDAQW-H---FNQMRERDVKSWTTMVDGLAINGRVD 218
E + ++ +++ A ++ G + W H ++ + +VK T +++ + G V
Sbjct: 201 ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVG 260
Query: 219 DARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGD 278
ARE+FD+M NV +W MI Y + +A+ELF +M E D
Sbjct: 261 KAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKM-EDDCG-------------- 305
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
P N +T+ A+++ GL EE ++ ++ + L P V ++
Sbjct: 306 -----------PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVD 354
Query: 339 ACSDLAGLNEGQQ-IHQL 355
L+E + IHQL
Sbjct: 355 MLGRAGFLDEAYKFIHQL 372
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 133/285 (46%), Gaps = 42/285 (14%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNGYVKLNQIEEAERLFYE 133
D ++ ++ Y CG ++ AR++FD P+ K +V W +LV+G+ + +EA ++FY+
Sbjct: 141 DTYVQAALVTFYSKCGDMEGARQVFDRMPE--KSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 134 MPERNVR----SWNTMIDGYARNGQT-----------EKALDLFRRMPERNVVSWNTIIK 178
M E ++ +++ A+ G + LDL NV +I
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL-------NVKLGTALIN 251
Query: 179 ALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM-----PVRNVV 233
S CG + A+ F++M+E +V +WT M+ +G A ELF++M P+ N V
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 234 SWNVMIKGYAKNRRLDEALELFERMPE--RDMPSWN---TLVTGFIQNGDLNRAEKLFHE 288
++ ++ A ++E +++RM + R +P +V + G L+ A K H+
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQ 371
Query: 289 MPQKNVIT----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
+ T WTAM+ H + ++I +L AL+P+
Sbjct: 372 LDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLI---ALEPD 413
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 54/267 (20%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-------PDAMKDVV-- 109
G ++ AR++FDRMPE+ + W ++++G+ G+ EA ++F PD+ V
Sbjct: 156 GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLL 215
Query: 110 ------------TW-----------------TALVNGYVKLNQIEEAERLFYEMPERNVR 140
+W TAL+N Y + + +A +F +M E NV
Sbjct: 216 SACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVA 275
Query: 141 SWNTMIDGYARNGQTEKALDLFRRM-----PERNVVSWNTIIKALSECGRIEDAQWHFNQ 195
+W MI Y +G ++A++LF +M P N V++ ++ A + G +E+ + + +
Sbjct: 276 AWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKR 335
Query: 196 MRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVS----WNVMIKGYAKNR 246
M + V+ MVD L G +D+A + ++ + W M+ +R
Sbjct: 336 MTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHR 395
Query: 247 RLDEALELFERMP--ERDMPSWNTLVT 271
D +E+ +R+ E D P + +++
Sbjct: 396 NYDLGVEIAKRLIALEPDNPGHHVMLS 422
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 183/651 (28%), Positives = 301/651 (46%), Gaps = 133/651 (20%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCG----VIKEARKLFD---- 100
N IS + DA K+FD M ER++ W TM++GY G I+ R++ D
Sbjct: 44 NNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
Query: 101 ------------------------------GPDAMK-DVVTWTALVNGYVKLNQIEEAER 129
G + ++ DVV ++V+ YVK ++ EA
Sbjct: 104 AANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANS 163
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDA 189
F E+ + SWNT+I GY + G ++A+ LF RMP+ NVVSWN +I + G
Sbjct: 164 SFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRAL 223
Query: 190 QWHFNQMRERDVKSWTTMVDGL-----------------------------AINGRVD-- 218
++ RE V + GL AI+ +D
Sbjct: 224 EFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMY 283
Query: 219 -------DARELF--DRMPVRNVVS-WNVMIKGYAKNRRLDEALELFERMPERDMPSWNT 268
A ++F +++ V + V+ WN M+ G+ N + AL L ++ + D+ +
Sbjct: 284 SNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSY 343
Query: 269 LVTGFIQ---------------------------------------NGDLNRAEKLFHEM 289
++G ++ G++ A KLFH +
Sbjct: 344 TLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRL 403
Query: 290 PQKNVITWTAMMTGYVQHGLSEEALKIFNKL-----QADHALKPNTGTFVTVLGACSDLA 344
P K++I ++ ++ G V+ G + A +F +L AD + N +L CS LA
Sbjct: 404 PNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSN------ILKVCSSLA 457
Query: 345 GLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGM 404
L G+QIH L K ++ +AL++MY KCGE+ +FD G+L +RD++SW G+
Sbjct: 458 SLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFD-GML-ERDVVSWTGI 515
Query: 405 IAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRS 464
I + +G +EA F+KM +G + N VT++ LL+AC H+GL+EE + +
Sbjct: 516 IVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYG 575
Query: 465 IQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVA 524
++ +HY C+VDL G+AG +EA +I + ++ ++W LL C H NA + ++A
Sbjct: 576 LEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIA 635
Query: 525 KKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWV 575
+K+LK P++ Y+ LSN YA++G W + + VR K G K+ G SW+
Sbjct: 636 EKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 191/404 (47%), Gaps = 14/404 (3%)
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQM 196
+NV N +I Y A +F M ERN+V+W T++ + G+ A + +M
Sbjct: 38 QNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRM 97
Query: 197 RERDVKS-----WTTMVDGLAINGRVDDARELFDRMPVRN----VVSWNVMIKGYAKNRR 247
+ + ++ ++ ++ + G + +++R+ N VV N ++ Y KN R
Sbjct: 98 LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGR 157
Query: 248 LDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQH 307
L EA F+ + SWNTL++G+ + G ++ A LFH MPQ NV++W +++G+V
Sbjct: 158 LIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDK 217
Query: 308 GLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYV 367
G S AL+ ++Q + L + L ACS L G+Q+H + K+ + S +
Sbjct: 218 G-SPRALEFLVRMQRE-GLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFA 275
Query: 368 VSALINMYSKCGELHIARRIF-DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE 426
+SALI+MYS CG L A +F E L + WN M++ + + + A+ L ++ +
Sbjct: 276 ISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQ 335
Query: 427 LGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLK 486
+ T L C + + GLQ L+ ++ + LVDL G ++
Sbjct: 336 SDLCFDSYTLSGALKICINYVNLRLGLQ-VHSLVVVSGYELDYIVGSILVDLHANVGNIQ 394
Query: 487 EAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKI 530
+A + L + + + L+ GC G + + ++++K+
Sbjct: 395 DAHKLFHRLP-NKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKL 437
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
C + G+ I + K ++ ++ + +I+MY L A ++FDE + +R+++
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDE--MSERNIV 72
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQ-ANDVTYVELLTACSHAGLVEEGLQYFDK 458
+W M++ Y G +AI L+ +M + + AN+ Y +L AC G ++ G+ +++
Sbjct: 73 TWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYER 132
Query: 459 LLKNRSIQVREDHYA--CLVDLCGRAGRLKEA 488
+ K +R D +VD+ + GRL EA
Sbjct: 133 IGKE---NLRGDVVLMNSVVDMYVKNGRLIEA 161
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 139/344 (40%), Positives = 223/344 (64%), Gaps = 4/344 (1%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
++LV + + G++ A K+F EMPQ+NV+TW+ MM GY Q G +EEAL +F + ++ L
Sbjct: 155 SSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFEN-L 213
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
N +F +V+ C++ L G+QIH L K++F S++V S+L+++YSKCG A +
Sbjct: 214 AVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQ 273
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHA 446
+F+E + ++L WN M+ AYA H + ++ I LF +M+ G + N +T++ +L ACSHA
Sbjct: 274 VFNE--VPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 447 GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGP 506
GLV+EG YFD++ ++R I+ + HYA LVD+ GRAGRL+EA +I + +D + SVWG
Sbjct: 332 GLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGA 390
Query: 507 LLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
LL C VH N ++ A K+ ++ P ++G + LSN YA+ G++++AA R ++D+G
Sbjct: 391 LLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGE 450
Query: 567 KKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
KK+ G SWVE N V F G++ H +S+ + L +L +M+K
Sbjct: 451 KKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEK 494
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 133/250 (53%), Gaps = 5/250 (2%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
N L+ + ++ + + F + PQK+ TW+++++ + Q+ L +L+ K+ A + L
Sbjct: 54 NNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGN-L 112
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
+P+ + +C+ L+ + G+ +H L KT + +V S+L++MY+KCGE+ AR+
Sbjct: 113 RPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARK 172
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHA 446
+FDE + QR++++W+GM+ YA G +EA+ LF + ND ++ +++ C+++
Sbjct: 173 MFDE--MPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANS 230
Query: 447 GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGP 506
L+E G Q L S + LV L + G + A+ + + V +L +W
Sbjct: 231 TLLELGRQ-IHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNA 288
Query: 507 LLAGCNVHGN 516
+L H +
Sbjct: 289 MLKAYAQHSH 298
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 189/401 (47%), Gaps = 59/401 (14%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM------PE 167
L+N Y K ++ R F + P+++ +W+++I +A+N +L+ ++M P+
Sbjct: 56 LINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPD 115
Query: 168 RNVVSWNTIIKA-LSEC--GRIEDAQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDAR 221
+V+ T A LS C GR H M+ + DV +++VD A G + AR
Sbjct: 116 DHVLPSATKSCAILSRCDIGR----SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYAR 171
Query: 222 ELFDRMPVRNVVSWNVMIKGYAKNRRLDEAL-----ELFERMPERDMP------------ 264
++FD MP RNVV+W+ M+ GYA+ +EAL LFE + D
Sbjct: 172 KMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANST 231
Query: 265 ----------------------SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMT 302
++LV+ + + G A ++F+E+P KN+ W AM+
Sbjct: 232 LLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLK 291
Query: 303 GYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQ 362
Y QH +++ +++F +++ +KPN TF+ VL ACS ++EG+ + ++ +
Sbjct: 292 AYAQHSHTQKVIELFKRMKLS-GMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIE 350
Query: 363 ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
+ ++L++M + G L A + + + + W ++ + H + A +
Sbjct: 351 PTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV-WGALLTSCTVHKNTELAAFAAD 409
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR 463
K+ ELG ++ + ++ L A + G E+ + KLL++R
Sbjct: 410 KVFELGPVSSGM-HISLSNAYAADGRFEDAAKA-RKLLRDR 448
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 46/217 (21%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD---------GPDAMKDVV 109
G I ARK+FD MP+R++ W M+ GY G +EA LF + V+
Sbjct: 165 GEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVI 224
Query: 110 TWTA-----------------------------LVNGYVKLNQIEEAERLFYEMPERNVR 140
+ A LV+ Y K E A ++F E+P +N+
Sbjct: 225 SVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLG 284
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQM 196
WN M+ YA++ T+K ++LF+RM + N +++ ++ A S G +++ +++F+QM
Sbjct: 285 IWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM 344
Query: 197 RERDV----KSWTTMVDGLAINGRVDDARELFDRMPV 229
+E + K + ++VD L GR+ +A E+ MP+
Sbjct: 345 KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPI 381
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 170/366 (46%), Gaps = 42/366 (11%)
Query: 101 GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALD 160
G DA DV ++LV+ Y K +I A ++F EMP+RNV +W+ M+ GYA+ G+ E+AL
Sbjct: 146 GYDA--DVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALW 203
Query: 161 LFRRMPERNVV----SWNTIIKALSECGRIE-DAQWH---FNQMRERDVKSWTTMVDGLA 212
LF+ N+ S++++I + +E Q H + +++V +
Sbjct: 204 LFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYS 263
Query: 213 INGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNT--- 268
G + A ++F+ +PV+N+ WN M+K YA++ + +ELF+RM M P++ T
Sbjct: 264 KCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLN 323
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVIT----WTAMMTGYVQHGLSEEALKIFNKLQADH 324
++ G ++ F +M + + + +++ + G +EAL++ + D
Sbjct: 324 VLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPID- 382
Query: 325 ALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQ---ESTYVVSALINMYSKCGEL 381
P + +L +C+ +++ ++ + F+ S+ + +L N Y+ G
Sbjct: 383 ---PTESVWGALLTSCT----VHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRF 435
Query: 382 H---IARRIFDEGLLRQRDLISW-------NGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
AR++ + ++ +SW + A H KE ++ K+ ELG +
Sbjct: 436 EDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKE---IYEKLAELGEEM 492
Query: 432 NDVTYV 437
Y+
Sbjct: 493 EKAGYI 498
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 145/343 (42%), Gaps = 58/343 (16%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD 100
L SA K C +I C GR + + D+ + ++++ Y CG I ARK+FD
Sbjct: 119 LPSATKSC--AILSRCDIGRSVHCLSM-KTGYDADVFVGSSLVDMYAKCGEIVYARKMFD 175
Query: 101 GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDG-------- 148
++VVTW+ ++ GY ++ + EEA LF E N+ S++++I
Sbjct: 176 -EMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLE 234
Query: 149 ---------------------------YARNGQTEKALDLFRRMPERNVVSWNTIIKALS 181
Y++ G E A +F +P +N+ WN ++KA +
Sbjct: 235 LGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYA 294
Query: 182 ECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVRNVVS--- 234
+ + F +M+ +K ++ +++ + G VD+ R FD+M +
Sbjct: 295 QHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDK 354
Query: 235 -WNVMIKGYAKNRRLDEALELFERMPERDMPS-WNTLVTGFI--QNGDLN--RAEKLFHE 288
+ ++ + RL EALE+ MP S W L+T +N +L A+K+F
Sbjct: 355 HYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFEL 414
Query: 289 MPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
P + + ++ Y G E+A K KL D K TG
Sbjct: 415 GPVSSGMH-ISLSNAYAADGRFEDAAKA-RKLLRDRGEKKETG 455
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 303/608 (49%), Gaps = 98/608 (16%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYI-----------MC------------------ 89
G + DA +FD MP+RD+ W +I+G++ +C
Sbjct: 175 GFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLE 234
Query: 90 ---------GVIKEARKLF-----DGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP 135
G +KE R L +G + K V +++ + Y K EA F E+
Sbjct: 235 CGFQACSNLGALKEGRCLHGFAVKNGLASSKFV--QSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 136 ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKAL-SECGRI----EDAQ 190
+ ++ SW ++I AR+G E++ D+F M + + +I L +E G++ +
Sbjct: 293 DEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKA 352
Query: 191 WHFNQMRERDVKSWTTMVDGLAINGRVD---DARELFDRMPVR-NVVSWNVMIKGYAKNR 246
+H +R T L++ + + A +LF R+ N +WN M+KGY K +
Sbjct: 353 FHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMK 412
Query: 247 RLDEALELFERMP----ERDMPSW-----------------------------------N 267
+ +ELF ++ E D S N
Sbjct: 413 CHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVN 472
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
+L+ + + GDL A ++F E NVITW AM+ YV SE+A+ +F+++ +++ K
Sbjct: 473 SLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSEN-FK 530
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
P++ T VT+L AC + L GQ IH+ I++T + + + +ALI+MY+KCG L +R +
Sbjct: 531 PSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSREL 590
Query: 388 FDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAG 447
FD G Q+D + WN MI+ Y HG + AI LF++M+E + T++ LL+AC+HAG
Sbjct: 591 FDAG--NQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAG 648
Query: 448 LVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPL 507
LVE+G + F K+ ++ HY+CLVDL R+G L+EA + + + +WG L
Sbjct: 649 LVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTL 707
Query: 508 LAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
L+ C HG ++G +A++ + +P+N G Y +L+NMY++ GKW+EA R M++ G+
Sbjct: 708 LSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVG 767
Query: 568 KQPGCSWV 575
K+ G S V
Sbjct: 768 KRAGHSVV 775
Score = 145 bits (367), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 120/558 (21%), Positives = 247/558 (44%), Gaps = 98/558 (17%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-------DGPDA 104
IS G+ + + ++F + RD+ LW ++I + G + F PD
Sbjct: 66 ISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDH 125
Query: 105 M--------------------------------KDVVTWTALVNGYVKLNQIEEAERLFY 132
++ + V Y K +++A +F
Sbjct: 126 FTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFD 185
Query: 133 EMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE------------------------- 167
EMP+R+V +W +I G+ +NG++E L +M
Sbjct: 186 EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGA 245
Query: 168 ------------RNVVSWNTIIKA-----LSECGRIEDAQWHFNQMRERDVKSWTTMVDG 210
+N ++ + +++ S+ G +A F ++ + D+ SWT+++
Sbjct: 246 LKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIAS 305
Query: 211 LAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPER----- 261
LA +G ++++ ++F M + + V + +I K + + + F R
Sbjct: 306 LARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG-KAFHGFVIRHCFSL 364
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK-NVITWTAMMTGYVQHGLSEEALKIFNKL 320
D N+L++ + + L+ AEKLF + ++ N W M+ GY + + +++F K+
Sbjct: 365 DSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKI 424
Query: 321 QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
Q + ++ ++ + +V+ +CS + + G+ +H + KT+ + VV++LI++Y K G+
Sbjct: 425 Q-NLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGD 483
Query: 381 LHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
L +A R+F E ++I+WN MIA+Y H ++AI LF++M F+ + +T V LL
Sbjct: 484 LTVAWRMFCEA---DTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLL 540
Query: 441 TACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLS 500
AC + G +E G Q + + ++ A L+D+ + G L+++ + + G
Sbjct: 541 MACVNTGSLERG-QMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDA-GNQKD 598
Query: 501 LSVWGPLLAGCNVHGNAD 518
W +++G +HG+ +
Sbjct: 599 AVCWNVMISGYGMHGDVE 616
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 171/394 (43%), Gaps = 61/394 (15%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPER-DLHLWGTMINGY--IMCGV--IKEARKL---- 98
CN+ +S C+ + A KLF R+ E + W TM+ GY + C V I+ RK+
Sbjct: 369 CNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLG 428
Query: 99 --FDGPDAMKDVVTWT----------------------------ALVNGYVKLNQIEEAE 128
D A + + + +L++ Y K+ + A
Sbjct: 429 IEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAW 488
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECG 184
R+F E + NV +WN MI Y Q+EKA+ LF RM N ++ T++ A G
Sbjct: 489 RMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTG 547
Query: 185 RIEDAQ----WHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIK 240
+E Q + E ++ ++D A G ++ +RELFD ++ V WNVMI
Sbjct: 548 SLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMIS 607
Query: 241 GYAKNRRLDEALELFERMPERDM----PSWNTLVTGFIQNGDLNRAEKLFHEMPQ----K 292
GY + ++ A+ LF++M E D+ P++ L++ G + + +KLF +M Q
Sbjct: 608 GYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKP 667
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
N+ ++ ++ + G EEA + P+ + T+L +C G ++
Sbjct: 668 NLKHYSCLVDLLSRSGNLEEAESTVMSM----PFSPDGVIWGTLLSSCMTHGEFEMGIRM 723
Query: 353 HQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
+ + Q Y + L NMYS G+ A R
Sbjct: 724 AERAVASDPQNDGYYI-MLANMYSAAGKWEEAER 756
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 113/245 (46%), Gaps = 9/245 (3%)
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
L++ + G N + ++FH + ++++ W +++ + +G +L F + P
Sbjct: 65 LISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFFFSMLLS-GQSP 123
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISK-TAFQESTYVVSALINMYSKCGELHIARRI 387
+ T V+ AC++L + G +H L+ K F +T V ++ + YSKCG L A +
Sbjct: 124 DHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLV 183
Query: 388 FDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGF---QANDVTYVELLTACS 444
FDE + RD+++W +I+ + +G + + KM G + N T ACS
Sbjct: 184 FDE--MPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACS 241
Query: 445 HAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVW 504
+ G ++EG +KN + + + + ++G EA+ LG D + W
Sbjct: 242 NLGALKEGRCLHGFAVKN-GLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG-DEDMFSW 299
Query: 505 GPLLA 509
++A
Sbjct: 300 TSIIA 304
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 261 bits (666), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/468 (30%), Positives = 260/468 (55%), Gaps = 20/468 (4%)
Query: 150 ARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVD 209
+ +G + A ++ + WN +I+ S E + + QM + + D
Sbjct: 53 SSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLR-----FGLLPD 107
Query: 210 GLAINGRVDDARELFDR--------MPVRNVVSW-----NVMIKGYAKNRRLDEALELFE 256
+ + + L +R V++ + W N +I Y R A +LF+
Sbjct: 108 HMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFD 167
Query: 257 RMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKI 316
MP +++ +WN+++ + ++GD+ A +F EM +++V+TW++M+ GYV+ G +AL+I
Sbjct: 168 EMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEI 227
Query: 317 FNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
F+++ + K N T V+V+ AC+ L LN G+ +H+ I + + ++LI+MY+
Sbjct: 228 FDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYA 287
Query: 377 KCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
KCG + A +F +++ D + WN +I A HG+ +E++ LF+KM+E +++T+
Sbjct: 288 KCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITF 347
Query: 437 VELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLG 496
+ LL ACSH GLV+E +F K LK + + +HYAC+VD+ RAG +K+A + I +
Sbjct: 348 LCLLAACSHGGLVKEAWHFF-KSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMP 406
Query: 497 VDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAAN 556
+ + S+ G LL GC HGN ++ + V KK+++++P N G Y L+N+YA +++ A +
Sbjct: 407 IKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARS 466
Query: 557 VRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDL 604
+R M+ KG+KK G S +++ T F+ DK+H S+ + Y +L L
Sbjct: 467 MREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKI-YAVLQL 513
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 163/363 (44%), Gaps = 29/363 (7%)
Query: 51 SISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYI-------MCGVIKEARKLFDGPD 103
S S L G +D A K ++ + + W +I G+ V + + PD
Sbjct: 48 SFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPD 107
Query: 104 AMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSW-----NTMIDGYARNGQTEKA 158
M T+ L+ +L+ + L + + + W NT+I Y A
Sbjct: 108 HM----TYPFLMKSSSRLSNRKLGGSLHCSVVKSGLE-WDLFICNTLIHMYGSFRDQASA 162
Query: 159 LDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVD 218
LF MP +N+V+WN+I+ A ++ G + A+ F++M ERDV +W++M+DG G +
Sbjct: 163 RKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYN 222
Query: 219 DARELFDRM-----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGF 273
A E+FD+M N V+ +I A L+ + + + +P L T
Sbjct: 223 KALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSL 282
Query: 274 I----QNGDLNRAEKLFH--EMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
I + G + A +F+ + + + + W A++ G HG E+L++F+K++ + +
Sbjct: 283 IDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMR-ESKID 341
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
P+ TF+ +L ACS + E + + ++ + + + ++++ S+ G + A
Sbjct: 342 PDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDF 401
Query: 388 FDE 390
E
Sbjct: 402 ISE 404
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 150/326 (46%), Gaps = 43/326 (13%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
E DL + T+I+ Y ARKLFD K++VTW ++++ Y K + A +F
Sbjct: 140 EWDLFICNTLIHMYGSFRDQASARKLFD-EMPHKNLVTWNSILDAYAKSGDVVSARLVFD 198
Query: 133 EMPERNVRSWNTMIDGYARNGQTEKALDLFRRM-----PERNVVSWNTIIKALSECGRIE 187
EM ER+V +W++MIDGY + G+ KAL++F +M + N V+ ++I A + G +
Sbjct: 199 EMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALN 258
Query: 188 DAQ----WHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR--NVVSWNVMIKG 241
+ + + V T+++D A G + DA +F R V+ + + WN +I G
Sbjct: 259 RGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGG 318
Query: 242 YAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMM 301
A + + E+L+LF +M E + + IT+ ++
Sbjct: 319 LASHGFIRESLQLFHKMRESKI---------------------------DPDEITFLCLL 351
Query: 302 TGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAF 361
GL +EA F L+ A +P + + ++ S AGL + H IS+
Sbjct: 352 AACSHGGLVKEAWHFFKSLKESGA-EPKSEHYACMVDVLSR-AGLV--KDAHDFISEMPI 407
Query: 362 QESTYVVSALINMYSKCGELHIARRI 387
+ + ++ AL+N G L +A +
Sbjct: 408 KPTGSMLGALLNGCINHGNLELAETV 433
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 153/344 (44%), Gaps = 42/344 (12%)
Query: 28 YPFLRTMSTSTS------SLHSAMKD---------CNTSISRLCQEGRIDDARKLFDRMP 72
YPFL S+ S SLH ++ CNT I ARKLFD MP
Sbjct: 111 YPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMP 170
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
++L W ++++ Y G + AR +FD + +DVVTW+++++GYVK + +A +F
Sbjct: 171 HKNLVTWNSILDAYAKSGDVVSARLVFD-EMSERDVVTWSSMIDGYVKRGEYNKALEIFD 229
Query: 133 EMPERNVRSWN--TMID--------GYARNGQTEKALDLFRRMPERNVVSWNTIIKALSE 182
+M N TM+ G G+T L +P V+ ++I ++
Sbjct: 230 QMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLP-LTVILQTSLIDMYAK 288
Query: 183 CGRIEDAQWHFNQ--MRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV----VSWN 236
CG I DA F + ++E D W ++ GLA +G + ++ +LF +M + +++
Sbjct: 289 CGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFL 348
Query: 237 VMIKGYAKNRRLDEALELFERMPERDMPS----WNTLVTGFIQNGDLNRAEKLFHEMPQK 292
++ + + EA F+ + E + +V + G + A EMP K
Sbjct: 349 CLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIK 408
Query: 293 NVITWT-AMMTGYVQHGLSEEALKIFNKLQADHALKP-NTGTFV 334
+ A++ G + HG E A + KL L+P N G +V
Sbjct: 409 PTGSMLGALLNGCINHGNLELAETVGKKLI---ELQPHNDGRYV 449
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/449 (34%), Positives = 249/449 (55%), Gaps = 48/449 (10%)
Query: 205 TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM- 263
T +++ L + G + AR++FD M + WN + KGY +N+ E+L L+++M RD+
Sbjct: 47 TQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKM--RDLG 104
Query: 264 --PSWNT--------------------------------------LVTGFIQNGDLNRAE 283
P T LV +++ G+L+ AE
Sbjct: 105 VRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAE 164
Query: 284 KLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
LF M K+++ W A + VQ G S AL+ FNK+ AD A++ ++ T V++L AC L
Sbjct: 165 FLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD-AVQFDSFTVVSMLSACGQL 223
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNG 403
L G++I+ K + V +A ++M+ KCG AR +F+E ++QR+++SW+
Sbjct: 224 GSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEE--MKQRNVVSWST 281
Query: 404 MIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLK-- 461
MI YA +G +EA+ LF MQ G + N VT++ +L+ACSHAGLV EG +YF +++
Sbjct: 282 MIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSN 341
Query: 462 NRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGK 521
+++++ R++HYAC+VDL GR+G L+EA+ I+ + V+ +WG LL C VH + +G+
Sbjct: 342 DKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGACAVHRDMILGQ 401
Query: 522 LVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTV 581
VA +++ P+ + LLSN+YA+ GKW VR KM+ G KK S VE +
Sbjct: 402 KVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKI 461
Query: 582 QVFVVGDKSHSQSELLGYLLLDLHTKMKK 610
F GDKSH QS+ + L ++ K++K
Sbjct: 462 HFFNRGDKSHPQSKAIYEKLDEILKKIRK 490
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 185/409 (45%), Gaps = 72/409 (17%)
Query: 31 LRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYI--- 87
LRT + +SL + + + I +C AR++FD M + + LW T+ GY+
Sbjct: 35 LRTGFSEKNSLLTQLLENLVVIGDMCY------ARQVFDEMHKPRIFLWNTLFKGYVRNQ 88
Query: 88 ----MCGVIKEARKL------FDGPDAMKDV-------------------------VTWT 112
+ K+ R L F P +K + + T
Sbjct: 89 LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVAT 148
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVS 172
LV Y+K ++ AE LF M +++ +WN + + G + AL+ F +M + V
Sbjct: 149 ELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA-DAVQ 207
Query: 173 WN--TIIKALSECGRI---EDAQWHFNQMRERDVKSWTTMVDGLAIN-----GRVDDARE 222
++ T++ LS CG++ E + +++ R+ ++ +V+ ++ G + AR
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDC-NIIVENARLDMHLKCGNTEAARV 266
Query: 223 LFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNT---LVTGFIQNGD 278
LF+ M RNVVSW+ MI GYA N EAL LF M + P++ T +++ G
Sbjct: 267 LFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGL 326
Query: 279 LNRAEKLFHEMPQKNVIT-------WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
+N ++ F M Q N + M+ + GL EEA + K+ ++P+TG
Sbjct: 327 VNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKM----PVEPDTG 382
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
+ +LGAC+ + GQ++ ++ +TA +Y V L N+Y+ G+
Sbjct: 383 IWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHV-LLSNIYAAAGK 430
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 144/305 (47%), Gaps = 43/305 (14%)
Query: 267 NTLVTGFIQN----GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
N+L+T ++N GD+ A ++F EM + + W + GYV++ L E+L ++ K++
Sbjct: 43 NSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMR- 101
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
D ++P+ T+ V+ A S L + G +H + K F V + L+ MY K GEL
Sbjct: 102 DLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELS 161
Query: 383 IARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTA 442
A +F+ ++ +DL++WN +A G A+ FNKM Q + T V +L+A
Sbjct: 162 SAEFLFES--MQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSA 219
Query: 443 CSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLS 502
C G +E G + +D+ R++ C + I+E +D+ L
Sbjct: 220 CGQLGSLEIGEEIYDR--------ARKEEIDCNI--------------IVENARLDMHLK 257
Query: 503 VWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMK 562
GN + +++ + +++ N ++S + YA G +EA + M+
Sbjct: 258 C-----------GNTEAARVLFE---EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQ 303
Query: 563 DKGLK 567
++GL+
Sbjct: 304 NEGLR 308
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/385 (22%), Positives = 155/385 (40%), Gaps = 86/385 (22%)
Query: 78 LWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIE-EAERLFYEMPE 136
L ++ ++ G + AR++FD + + W L GYV+ NQ+ E+ L+ +M +
Sbjct: 45 LLTQLLENLVVIGDMCYARQVFDEMHKPR-IFLWNTLFKGYVR-NQLPFESLLLYKKMRD 102
Query: 137 RNVRS---------------------------------------WNTMIDGYARNGQTEK 157
VR ++ Y + G+
Sbjct: 103 LGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSS 162
Query: 158 ALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK--SWT--TMVDGLAI 213
A LF M +++V+WN + + G A +FN+M V+ S+T +M+
Sbjct: 163 AEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQ 222
Query: 214 NGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTL 269
G ++ E++DR N++ N + + K + A LFE M +R++ SW+T+
Sbjct: 223 LGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTM 282
Query: 270 VTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
+ G+ NGD S EAL +F +Q + L+PN
Sbjct: 283 IVGYAMNGD-------------------------------SREALTLFTTMQ-NEGLRPN 310
Query: 330 TGTFVTVLGACSDLAGLNEGQQIHQLISKT---AFQESTYVVSALINMYSKCGELHIARR 386
TF+ VL ACS +NEG++ L+ ++ + + ++++ + G L A
Sbjct: 311 YVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYE 370
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHH 411
F + + + D W ++ A A H
Sbjct: 371 -FIKKMPVEPDTGIWGALLGACAVH 394
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 80/178 (44%), Gaps = 18/178 (10%)
Query: 350 QQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYA 409
++IH ++ +T F E +++ L+ G++ AR++FDE + + + WN + Y
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDE--MHKPRIFLWNTLFKGYV 85
Query: 410 HHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRE 469
+ E++ L+ KM++LG + ++ TY ++ A S G G ++K
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY------- 138
Query: 470 DHYAC-------LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIG 520
+ C LV + + G L A + E + V L W LA C GN+ I
Sbjct: 139 -GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIA 194
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/604 (28%), Positives = 293/604 (48%), Gaps = 83/604 (13%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG------- 101
N+ IS + G + A +F+ + RD+ ++NG+ G+ +EA + +
Sbjct: 330 NSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKI 389
Query: 102 -PDAMKDVVTWTALVN--GYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKA 158
PD + VV+ T++ + + + + EM R + N++ID Y + G T +A
Sbjct: 390 QPD-IATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Query: 159 LDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVD 218
LF+ R++VSWN++I A S+ G A+ F ++ S ++ LAI D
Sbjct: 449 ELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCD 508
Query: 219 DAREL-------------------FDRMPV----RNVVSWNVMIKGYAKNRRLDEALELF 255
+ L F R+ R++ SWN +I G A + E+L F
Sbjct: 509 SSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAF 568
Query: 256 ERMP----------------------------------------ERDMPSWNTLVTGFIQ 275
+ M E D NTL+T + +
Sbjct: 569 QAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGR 628
Query: 276 NGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVT 335
D+ A K+F + N+ +W +++ Q+ E ++F L+ L+PN TFV
Sbjct: 629 CKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK----LEPNEITFVG 684
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF-DEGLLR 394
+L A + L + G Q H + + FQ + +V +AL++MYS CG L ++F + G+
Sbjct: 685 LLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV-- 742
Query: 395 QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVEEGL 453
+ +WN +I+A+ HG G++A+ LF ++ + N +++ LL+ACSH+G ++EGL
Sbjct: 743 -NSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGL 801
Query: 454 QYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNV 513
Y+ ++ + ++ +H +VD+ GRAG+L+EA+ I G+G VWG LL+ CN
Sbjct: 802 SYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNY 861
Query: 514 HGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 573
HG+ +GK VA+ + ++EP+NA Y L+N Y +G W+EA +R ++D LKK PG S
Sbjct: 862 HGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYS 921
Query: 574 WVEV 577
++V
Sbjct: 922 VIDV 925
Score = 158 bits (400), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 141/593 (23%), Positives = 257/593 (43%), Gaps = 84/593 (14%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF---DGPDA 104
CN ++ + + A +F M RD+ W T++ + G +++ + F G
Sbjct: 226 CNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQ 285
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEM------PERNVRSWNTMIDGYARNGQTEKA 158
D VT++ +++ + ++ E L + PE +V N++I Y++ G TE A
Sbjct: 286 EADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAA 345
Query: 159 LDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERD--------VKSWTTMVDG 210
+F + R+V+S N I+ + G E+A NQM+ D V S T++
Sbjct: 346 ETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGD 405
Query: 211 LAIN--GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNT 268
L+ + GR + M R + N +I Y K +A LF+ RD+ SWN+
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNS 465
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQ----------------------------KNVITW--- 297
+++ F QNG ++A+ LF E+ K+V W
Sbjct: 466 MISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK 525
Query: 298 -----------------------TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFV 334
++++G G E+L+ F + + ++ + T +
Sbjct: 526 LGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLL 585
Query: 335 TVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR 394
+ A +L + +G+ H L K+ + T + + LI MY +C ++ A ++F GL+
Sbjct: 586 GTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF--GLIS 643
Query: 395 QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
+L SWN +I+A + + G+E LF + L + N++T+V LL+A + G G+Q
Sbjct: 644 DPNLCSWNCVISALSQNKAGREVFQLF---RNLKLEPNEITFVGLLSASTQLGSTSYGMQ 700
Query: 455 YFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVH 514
L++ R Q A LVD+ G L+ + GV+ S+S W +++ H
Sbjct: 701 AHCHLIR-RGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVN-SISAWNSVISAHGFH 758
Query: 515 GNADIGKLVAKKI---LKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 564
G + + K++ ++EP + SLLS S G E + +M++K
Sbjct: 759 GMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHS-GFIDEGLSYYKQMEEK 810
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 119/512 (23%), Positives = 224/512 (43%), Gaps = 84/512 (16%)
Query: 67 LFDRMPERD-------LHLWGTMINGYIMCGVIKEARKLFDGP---DAMKDVVTWTALVN 116
LFD +PER+ ++ ++M + R + ++D+ T + L+
Sbjct: 71 LFDELPERENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLT 130
Query: 117 GYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP---------- 166
Y + ++ + LF E+ E++V WN+MI +NG+ A+ LF M
Sbjct: 131 FYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTT 190
Query: 167 -------------------------ERNVVSWNTIIKAL----SECGRIEDAQWHFNQMR 197
E +V +++ AL ++ + A+ F M
Sbjct: 191 LLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHME 250
Query: 198 ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALE 253
RD+ SW T++ NG + + F M + V+++ +I + L
Sbjct: 251 HRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGES 310
Query: 254 LFERM------PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQH 307
L + PE + N++++ + + GD AE +F E+ ++VI+ A++ G+ +
Sbjct: 311 LHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAAN 370
Query: 308 GLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTY- 366
G+ EEA I N++Q+ ++P+ T V++ C DL+ EG+ +H + Q
Sbjct: 371 GMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALE 430
Query: 367 VVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNK-MQ 425
V++++I+MY KCG A +F RDL+SWN MI+A++ +G+ +A NLF + +
Sbjct: 431 VINSVIDMYGKCGLTTQAELLFKT--TTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVS 488
Query: 426 ELGFQANDV-TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGR 484
E + T + +LT+C + D L+ +S+ C + + G
Sbjct: 489 EYSCSKFSLSTVLAILTSCDSS----------DSLIFGKSVH-------CWLQ---KLGD 528
Query: 485 LKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN 516
L AF +E + L+ W +++GC G+
Sbjct: 529 LTSAFLRLETMSETRDLTSWNSVISGCASSGH 560
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 191/462 (41%), Gaps = 90/462 (19%)
Query: 44 AMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF---- 99
A++ N+ I + G A LF RDL W +MI+ + G +A+ LF
Sbjct: 428 ALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV 487
Query: 100 --------------------DGPDAM---KDVVTWTA----LVNGYVKLNQIEEAERLFY 132
D D++ K V W L + +++L + E
Sbjct: 488 SEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLRLETMSET----- 542
Query: 133 EMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN--TIIKALSECGR----I 186
R++ SWN++I G A +G ++L F+ M + + T++ +S G +
Sbjct: 543 ----RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVL 598
Query: 187 EDAQWH---FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
+ +H +RE D + T++ ++ A ++F + N+ SWN +I +
Sbjct: 599 QGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALS 658
Query: 244 KNRRLDEALELFERMP-ERDMPSWNTLVT---------------------GFIQN----- 276
+N+ E +LF + E + ++ L++ GF N
Sbjct: 659 QNKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSA 718
Query: 277 ---------GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
G L K+F ++ W ++++ + HG+ E+A+++F +L ++ ++
Sbjct: 719 ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEME 778
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIH-QLISKTAFQESTYVVSALINMYSKCGELHIARR 386
PN +F+++L ACS ++EG + Q+ K + T +++M + G+L A
Sbjct: 779 PNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYE 838
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHG---YGKEAINLFNKMQ 425
F G+ + W +++A +HG GKE + +M+
Sbjct: 839 -FITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEME 879
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 266/513 (51%), Gaps = 55/513 (10%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGY-ARNGQTEKALDL----FRRMPER 168
L+ Y K+ + ++A++LF EMP RN+ +WN +I G R+G T L R+
Sbjct: 77 LLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILFT 136
Query: 169 NV----VSWNTIIKALSECGRIEDA-QWH---FNQMRERDVKSWTTMVDGLAINGRVDDA 220
+V VS+ +I+ ++ ++ Q H Q E T++V G + +A
Sbjct: 137 DVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEA 196
Query: 221 RELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP--------------------- 259
R +F+ + R++V WN ++ Y N +DEA L + M
Sbjct: 197 RRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR 256
Query: 260 ----------------ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG 303
+ D+P L+ + ++ L+ A + F M +NV++W AM+ G
Sbjct: 257 IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 304 YVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQE 363
+ Q+G EA+++F ++ ++ L+P+ TF +VL +C+ + + E +Q+ +++K +
Sbjct: 317 FAQNGEGREAMRLFGQMLLEN-LQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSAD 375
Query: 364 STYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNK 423
V ++LI+ YS+ G L A F +R+ DL+SW +I A A HG+ +E++ +F
Sbjct: 376 FLSVANSLISSYSRNGNLSEALLCFHS--IREPDLVSWTSVIGALASHGFAEESLQMFES 433
Query: 424 MQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAG 483
M + Q + +T++E+L+ACSH GLV+EGL+ F ++ + I+ ++HY CL+DL GRAG
Sbjct: 434 MLQ-KLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAG 492
Query: 484 RLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSN 543
+ EA +++ + + S GCN+H + K AKK+L+IEP YS+LSN
Sbjct: 493 FIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSN 552
Query: 544 MYASVGKWKEAANVRMKMKDKGLK-KQPGCSWV 575
Y S G W +AA +R + + K PGCSW+
Sbjct: 553 AYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 165/380 (43%), Gaps = 96/380 (25%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIM----------CGVIKEARKLFDGPDAMKDVVT 110
DDA KLFD MP R++ W +I+G I G +R LF D D V+
Sbjct: 87 FDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRILF--TDVSLDHVS 144
Query: 111 W-----------------------------------TALVNGYVKLNQIEEAERLFYEMP 135
+ T+LV+ Y K I EA R+F +
Sbjct: 145 FMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL 204
Query: 136 ERNVRSWNTMIDGYARNGQTEKALDLFRRM---PERNVVSWNTIIKALSECGRIEDA-QW 191
+R++ WN ++ Y NG ++A L + M R + T LS C RIE Q
Sbjct: 205 DRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC-RIEQGKQI 263
Query: 192 H---FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRL 248
H F + D+ T +++ A + + DARE F+ M VRNVVSWN MI G+A+N
Sbjct: 264 HAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEG 323
Query: 249 DEALELFERMPERDMPS------------------W---------------------NTL 269
EA+ LF +M ++ W N+L
Sbjct: 324 REAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSL 383
Query: 270 VTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
++ + +NG+L+ A FH + + ++++WT+++ HG +EE+L++F + L+P+
Sbjct: 384 ISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESML--QKLQPD 441
Query: 330 TGTFVTVLGACSDLAGLNEG 349
TF+ VL ACS + EG
Sbjct: 442 KITFLEVLSACSHGGLVQEG 461
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 188/384 (48%), Gaps = 23/384 (5%)
Query: 174 NTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLA-----INGRVDDARELFDRMP 228
N +++A ++ +DA F++M R++ +W ++ G+ N R R+
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHLGFCYLSRIL 134
Query: 229 VRNV----VSWNVMIKGYAKNRRLDEALELFERMPERDMPS----WNTLVTGFIQNGDLN 280
+V VS+ +I+ + + ++L M ++ + S +LV + + G +
Sbjct: 135 FTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIV 194
Query: 281 RAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD-HALKPNTGTFVTVLGA 339
A ++F + ++++ W A+++ YV +G+ +EA + + +D + + + TF ++L A
Sbjct: 195 EARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSA 254
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
C + +G+QIH ++ K ++Q V +AL+NMY+K L AR F+ ++ R+++
Sbjct: 255 CR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVV--RNVV 308
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
SWN MI +A +G G+EA+ LF +M Q +++T+ +L++C+ + E Q +
Sbjct: 309 SWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMV 368
Query: 460 LKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADI 519
K S + L+ R G L EA + + L W ++ HG A+
Sbjct: 369 TKKGSADFLSVANS-LISSYSRNGNLSEALLCFHSIR-EPDLVSWTSVIGALASHGFAEE 426
Query: 520 GKLVAKKIL-KIEPENAGTYSLLS 542
+ + +L K++P+ +LS
Sbjct: 427 SLQMFESMLQKLQPDKITFLEVLS 450
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 155/335 (46%), Gaps = 42/335 (12%)
Query: 236 NVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQ-NGDLNRAEKLFHEMPQKNV 294
N +++ Y K R D+A +LF+ MP R++ +WN L+ G IQ +GD N L
Sbjct: 75 NKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNHRAHL--------- 125
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
G + +F + DH +F+ ++ C+D + G Q+H
Sbjct: 126 -------------GFCYLSRILFTDVSLDHV------SFMGLIRLCTDSTNMKAGIQLHC 166
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
L+ K + S + ++L++ Y KCG + ARR+F+ L RDL+ WN ++++Y +G
Sbjct: 167 LMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVL--DRDLVLWNALVSSYVLNGMI 224
Query: 415 KEAINLFNKM--QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
EA L M + F+ + T+ LL+AC +E+G Q L K S Q
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFK-VSYQFDIPVA 279
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNA-DIGKLVAKKILK-I 530
L+++ ++ L +A E + V +S W ++ G +G + +L + +L+ +
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVS-WNAMIVGFAQNGEGREAMRLFGQMLLENL 338
Query: 531 EPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 565
+P+ S+LS+ W E V+ + KG
Sbjct: 339 QPDELTFASVLSSCAKFSAIW-EIKQVQAMVTKKG 372
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 145/336 (43%), Gaps = 58/336 (17%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD--GPDAMK---------- 106
G I +AR++F+ + +RDL LW +++ Y++ G+I EA L G D +
Sbjct: 191 GLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSS 250
Query: 107 ------------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSW 142
D+ TAL+N Y K N + +A F M RNV SW
Sbjct: 251 LLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSW 310
Query: 143 NTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSECGRIEDAQWHFNQMRERDV 201
N MI G+A+NG+ +A+ LF +M N+ T LS C + A W Q++
Sbjct: 311 NAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKF-SAIWEIKQVQAMVT 369
Query: 202 KSWT--------TMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALE 253
K + +++ + NG + +A F + ++VSW +I A + +E+L+
Sbjct: 370 KKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQ 429
Query: 254 LFERMPERDMP---SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT-----WTAMMTGYV 305
+FE M ++ P ++ +++ G + + F M + I +T ++
Sbjct: 430 MFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLG 489
Query: 306 QHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACS 341
+ G +EA + N + + P+T G C+
Sbjct: 490 RAGFIDEASDVLNSMPTE----PSTHALAAFTGGCN 521
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 124/275 (45%), Gaps = 27/275 (9%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG---PDAMKDVVTWTA 113
+ + DAR+ F+ M R++ W MI G+ G +EA +LF + D +T+ +
Sbjct: 288 KSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFAS 347
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSW----NTMIDGYARNGQTEKALDLFRRMPERN 169
+++ K + I E +++ + ++ + N++I Y+RNG +AL F + E +
Sbjct: 348 VLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPD 407
Query: 170 VVSWNTIIKALSECGRIEDAQWHFNQMRER---DVKSWTTMVDGLAINGRVDDARELFDR 226
+VSW ++I AL+ G E++ F M ++ D ++ ++ + G V + F R
Sbjct: 408 LVSWTSVIGALASHGFAEESLQMFESMLQKLQPDKITFLEVLSACSHGGLVQEGLRCFKR 467
Query: 227 MPVRNVVS-----WNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNR 281
M + + +I + +DEA ++ MP PS + L F +++
Sbjct: 468 MTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTE--PSTHAL-AAFTGGCNIHE 524
Query: 282 --------AEKLFHEMPQKNVITWTAMMTGYVQHG 308
A+KL P K V ++ + YV G
Sbjct: 525 KRESMKWGAKKLLEIEPTKPV-NYSILSNAYVSEG 558
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/599 (27%), Positives = 284/599 (47%), Gaps = 83/599 (13%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAMK--- 106
++G + A+ LFD MPERD +W +I GY G +A KLF P A
Sbjct: 97 KKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVN 156
Query: 107 ----------------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERN 138
D AL++ Y K ++ AE LF EM +++
Sbjct: 157 LLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKS 216
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIK------------------- 178
SWNTMI Y+++G E+A+ +F+ M E+NV +S TII
Sbjct: 217 TVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCG 276
Query: 179 -------------ALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFD 225
A S CG + A+ + ++ + T++V A G +D A F
Sbjct: 277 MVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFS 336
Query: 226 R-----MPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFI----QN 276
+ M + + V+ ++ G K+ +D + L + + + +V G I +
Sbjct: 337 KTRQLCMKI-DAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKF 395
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
D+ LF ++ + +I+W ++++G VQ G + A ++F+++ L P+ T ++
Sbjct: 396 DDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASL 455
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR 396
L CS L LN G+++H + F+ +V +ALI+MY+KCG A +F ++
Sbjct: 456 LAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKS--IKAP 513
Query: 397 DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYF 456
+WN MI+ Y+ G A++ + +M+E G + +++T++ +L+AC+H G V+EG F
Sbjct: 514 CTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICF 573
Query: 457 DKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN 516
++K I HYA +V L GRA EA +I + + +VWG LL+ C +H
Sbjct: 574 RAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRE 633
Query: 517 ADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWV 575
++G+ VA+K+ ++ +N G Y L+SN+YA+ W + VR MKD G G S +
Sbjct: 634 LEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 201/448 (44%), Gaps = 51/448 (11%)
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV 171
T+L+N Y+K + A+ LF EMPER+ WN +I GY+RNG A LF M ++
Sbjct: 89 TSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS 148
Query: 172 -SWNTIIKALSECGRI----EDAQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDAREL 223
S T++ L CG+ + H + E D + ++ + + A L
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 224 FDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER---------------------- 261
F M ++ VSWN MI Y+++ +EA+ +F+ M E+
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL 268
Query: 262 -----------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLS 310
D+ +LV + + G L AE+L+ Q +++ T++++ Y + G
Sbjct: 269 HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDM 328
Query: 311 EEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSA 370
+ A+ F+K + +K + V +L C + ++ G +H K+ T VV+
Sbjct: 329 DIAVVYFSKTR-QLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNG 387
Query: 371 LINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL-GF 429
LI MYSK ++ +F++ L++ LISWN +I+ G A +F++M G
Sbjct: 388 LITMYSKFDDVETVLFLFEQ--LQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGL 445
Query: 430 QANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC--LVDLCGRAGRLKE 487
+ +T LL CS + G + L+N +++ C L+D+ + G +
Sbjct: 446 LPDAITIASLLAGCSQLCCLNLGKELHGYTLRN---NFENENFVCTALIDMYAKCGNEVQ 502
Query: 488 AFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
A ++ + + + + W +++G ++ G
Sbjct: 503 AESVFKSIKAPCT-ATWNSMISGYSLSG 529
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 307 HG-LSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLN----EGQQIHQLISKTAF 361
HG +S + IF L +L PN T L A + N + +Q+ ++K+
Sbjct: 25 HGEISSSPITIFRDLLRS-SLTPNHFTMSIFLQATT--TSFNSFKLQVEQVQTHLTKSGL 81
Query: 362 QESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLF 421
YV ++L+N+Y K G + A+ +FDE + +RD + WN +I Y+ +GY +A LF
Sbjct: 82 DRFVYVKTSLLNLYLKKGCVTSAQMLFDE--MPERDTVVWNALICGYSRNGYECDAWKLF 139
Query: 422 NKMQELGFQANDVTYVELLTACSHAGLVEEG 452
M + GF + T V LL C G V +G
Sbjct: 140 IVMLQQGFSPSATTLVNLLPFCGQCGFVSQG 170
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 271/487 (55%), Gaps = 43/487 (8%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM--------PERNVVSWNTIIK 178
A +F + +N WNT+I G++R+ E A+ +F M P+R +++ ++ K
Sbjct: 77 AYLVFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQR--LTYPSVFK 134
Query: 179 ALSECGRIEDA-QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV 237
A G+ D Q H ++E G DD+ F R N
Sbjct: 135 AYGRLGQARDGRQLHGMVIKE----------------GLEDDS---FIR---------NT 166
Query: 238 MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITW 297
M+ Y L EA +F M D+ +WN+++ GF + G +++A+ LF EMPQ+N ++W
Sbjct: 167 MLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSW 226
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
+M++G+V++G ++AL +F ++Q + +KP+ T V++L AC+ L +G+ IH+ I
Sbjct: 227 NSMISGFVRNGRFKDALDMFREMQ-EKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIV 285
Query: 358 KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEA 417
+ F+ ++ VV+ALI+MY KCG + +F+ +Q L WN MI A++G+ + A
Sbjct: 286 RNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ--LSCWNSMILGLANNGFEERA 343
Query: 418 INLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD 477
++LF++++ G + + V+++ +LTAC+H+G V ++F + + I+ HY +V+
Sbjct: 344 MDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVN 403
Query: 478 LCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGT 537
+ G AG L+EA +I+ + V+ +W LL+ C GN ++ K AK + K++P+
Sbjct: 404 VLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCG 463
Query: 538 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELL 597
Y LLSN YAS G ++EA R+ MK++ ++K+ GCS +EV V F+ +H +S +
Sbjct: 464 YVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEI 523
Query: 598 GYLLLDL 604
Y LLD+
Sbjct: 524 -YSLLDI 529
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 187/379 (49%), Gaps = 56/379 (14%)
Query: 59 GRIDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTAL 114
G+ D R+L + E D + TM++ Y+ CG + EA ++F G DVV W ++
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF-DVVAWNSM 198
Query: 115 VNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV---- 170
+ G+ K I++A+ LF EMP+RN SWN+MI G+ RNG+ + ALD+FR M E++V
Sbjct: 199 IMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDG 258
Query: 171 VSWNTIIKALSECGRIEDAQW-HFNQMRER-DVKSW--TTMVDGLAINGRVDDARELFDR 226
+ +++ A + G E +W H +R R ++ S T ++D G +++ +F+
Sbjct: 259 FTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC 318
Query: 227 MPVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRA 282
P + + WN MI G A N + A++LF + E D S+ ++T +G+++RA
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 283 EKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
++ F M +K +I E ++K + + V VLG
Sbjct: 379 DEFFRLMKEKYMI---------------EPSIKHYTLM-------------VNVLGG--- 407
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWN 402
AGL E + LI +E T + S+L++ K G + +A+R L++ D
Sbjct: 408 -AGLLE--EAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRA--AKCLKKLDPDETC 462
Query: 403 GMIA---AYAHHGYGKEAI 418
G + AYA +G +EA+
Sbjct: 463 GYVLLSNAYASYGLFEEAV 481
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 135/288 (46%), Gaps = 22/288 (7%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF---DGPDAM 105
N+ I + G ID A+ LFD MP+R+ W +MI+G++ G K+A +F D
Sbjct: 196 NSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVK 255
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT-----MIDGYARNGQTEKALD 160
D T +L+N L E+ R +E RN N+ +ID Y + G E+ L+
Sbjct: 256 PDGFTMVSLLNACAYLGASEQG-RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLN 314
Query: 161 LFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGR 216
+F P++ + WN++I L+ G E A F+++ E D S+ ++ A +G
Sbjct: 315 VFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGE 374
Query: 217 VDDARELFDRMPVRNVVS-----WNVMIKGYAKNRRLDEALELFERMP-ERDMPSWNTLV 270
V A E F M + ++ + +M+ L+EA L + MP E D W++L+
Sbjct: 375 VHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
Query: 271 TGFIQNGDL---NRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
+ + G++ RA K ++ + + Y +GL EEA++
Sbjct: 435 SACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVE 482
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 145/297 (48%), Gaps = 22/297 (7%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
NT + G + +A ++F M D+ W +MI G+ CG+I +A+ LFD ++
Sbjct: 165 NTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFD-EMPQRNG 223
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEKAL----D 160
V+W ++++G+V+ + ++A +F EM E++V+ + ++++ A G +E+
Sbjct: 224 VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEY 283
Query: 161 LFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDA 220
+ R E N + +I +CG IE+ F ++ + W +M+ GLA NG + A
Sbjct: 284 IVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERA 343
Query: 221 RELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPERDM--PS---WNTLVT 271
+LF + + VS+ ++ A + + A E F M E+ M PS + +V
Sbjct: 344 MDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVN 403
Query: 272 GFIQNGDLNRAEKLFHEMP-QKNVITWTAMMTGYVQHG---LSEEALKIFNKLQADH 324
G L AE L MP +++ + W+++++ + G +++ A K KL D
Sbjct: 404 VLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDE 460
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 139/312 (44%), Gaps = 67/312 (21%)
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP 290
V + V+ A ++ A +F R+ ++ WNT++ GF ++ F EM
Sbjct: 57 TVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSS--------FPEM- 107
Query: 291 QKNVITWTAMMTGYVQHGLSEEALKIF-NKLQADHALKPNTGTFVTVLGACSDLAGLNEG 349
A+ IF + L + ++KP T+ +V A L +G
Sbjct: 108 ----------------------AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDG 145
Query: 350 QQIHQLISKTAFQESTYVVSALINMY-------------------------------SKC 378
+Q+H ++ K ++ +++ + +++MY +KC
Sbjct: 146 RQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKC 205
Query: 379 GELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVE 438
G + A+ +FDE + QR+ +SWN MI+ + +G K+A+++F +MQE + + T V
Sbjct: 206 GLIDQAQNLFDE--MPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVS 263
Query: 439 LLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVD 498
LL AC++ G E+G + +++NR ++ L+D+ + G ++E N+ E
Sbjct: 264 LLNACAYLGASEQGRWIHEYIVRNR-FELNSIVVTALIDMYCKCGCIEEGLNVFE-CAPK 321
Query: 499 LSLSVWGPLLAG 510
LS W ++ G
Sbjct: 322 KQLSCWNSMILG 333
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 255 bits (652), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 170/600 (28%), Positives = 310/600 (51%), Gaps = 72/600 (12%)
Query: 38 TSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDL----HLWGTMING-----YIM 88
T S+ S+ + I LC+ G++ +A ++ + ++ L+ +++ +
Sbjct: 19 TPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFI 78
Query: 89 CGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQ-IEEAERLFYEMPERNVRSWNTMID 147
G+ A + G + ++V +L++ Y KL + E R+F ++ SW +M+
Sbjct: 79 HGIQFHAHVVKSGLETDRNV--GNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMS 136
Query: 148 GYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKS 203
GY + KAL++F M + N + ++ +KA SE G + + F+ +
Sbjct: 137 GYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRC-FHGVVITHGFE 195
Query: 204 W-----TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM 258
W +T+ +N DAR +FD MP +V+ W ++ ++KN +EAL LF M
Sbjct: 196 WNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAM 255
Query: 259 PERD--MPSWNTLVTGFIQNGDLNR----------------------------------- 281
+P +T T G+L R
Sbjct: 256 HRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGS 315
Query: 282 ---AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
A ++F+ M +KN ++W+A++ GY Q+G E+A++IF +++ + + F TVL
Sbjct: 316 VREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREME-----EKDLYCFGTVLK 370
Query: 339 ACSDLAGLNEGQQIH-QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRD 397
AC+ LA + G++IH Q + + F + V SALI++Y K G + A R++ + + R+
Sbjct: 371 ACAGLAAVRLGKEIHGQYVRRGCFG-NVIVESALIDLYGKSGCIDSASRVYSK--MSIRN 427
Query: 398 LISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFD 457
+I+WN M++A A +G G+EA++ FN M + G + + ++++ +LTAC H G+V+EG YF
Sbjct: 428 MITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFV 487
Query: 458 KLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNA 517
+ K+ I+ +HY+C++DL GRAG +EA N++E S+WG LL C + +A
Sbjct: 488 LMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADA 547
Query: 518 D-IGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVE 576
+ + +AK+++++EP+ +Y LLSNMY ++G+ +A N+R M +G+ K G SW++
Sbjct: 548 SRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 255 bits (651), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 175/634 (27%), Positives = 299/634 (47%), Gaps = 93/634 (14%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYI--------------------- 87
N IS + G ++ ARK+FD+MP R++ + + + Y
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 88 ------------MCGVIKEA------RKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAER 129
+C V+++ +VV T+++ Y +E A R
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM------PERNVVSW---------- 173
+F + R+ +WNTMI G +N + E L FR M P + S
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 174 -----------------------NTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDG 210
N ++ CG + +A + F ++ ++ SW +++ G
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISG 375
Query: 211 LAINGRVDDARELFDRM-----PVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ER 261
+ NG + A ++ R+ P + +++ I A+ R L ++ ER
Sbjct: 376 CSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYER 435
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
+ TL++ + +N + A+K+F M +++V+ WT M+ G+ + G SE A++ F ++
Sbjct: 436 SVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMY 495
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
+ + + + +V+GACSD+A L +G+ H L +T F V AL++MY K G+
Sbjct: 496 REKN-RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKY 554
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
A IF L DL WN M+ AY+ HG ++A++ F ++ E GF + VTY+ LL
Sbjct: 555 ETAETIFS--LASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLA 612
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIE-GLGVDLS 500
ACSH G +G ++ +K + I+ HY+C+V+L +AG + EA +IE +
Sbjct: 613 ACSHRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQ 671
Query: 501 LSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMK 560
+W LL+ C N IG A++ILK++PE+ T+ LLSN+YA G+W++ A +R K
Sbjct: 672 AELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRK 731
Query: 561 MKDKGLKKQPGCSWVEV-GNTVQVFVVGDKSHSQ 593
++ K PG SW+EV N QVF GD+S+ +
Sbjct: 732 IRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPE 765
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 152/352 (43%), Gaps = 63/352 (17%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAM--MTGYVQHGLSEEALKI-FNKLQAD 323
N L++ +++ L +A K+F +MPQ+N++T + + YV G S + I Q
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSFQMI 85
Query: 324 HALKPN--TGTFVTVLGACSDLAGLNEGQQIHQLI---SKTAFQESTYVVSALINMYSKC 378
+ N + V + C + L +QIH L+ A ES Y + LI+MY +C
Sbjct: 86 FFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC 145
Query: 379 GELHIARRIFDEGLLRQRDLISWNGMIAAYAHH-GYGKEAINLFNKMQELGFQANDVTYV 437
G L AR++FD+ + R+++S+N + +AY+ + + A L M + N T+
Sbjct: 146 GSLEQARKVFDK--MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFT 203
Query: 438 ELLTACSHAGLVEEG---------LQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEA 488
L+ C+ V G L Y D ++ S+ Y+ DL A R+ +
Sbjct: 204 SLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVL---GMYSSCGDL-ESARRIFDC 259
Query: 489 FN-------------------IIEGL---------GVDLSLSVWGPLLAGCNVHGNADIG 520
N I +GL GVD + + +L GC+ G+ +G
Sbjct: 260 VNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 521 KLVAKKIL------KIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
KL+ +I+ + +NA L +MY S G +EA V ++ + L
Sbjct: 320 KLIHARIIVSDSLADLPLDNA-----LLDMYCSCGDMREAFYVFGRIHNPNL 366
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 138/471 (29%), Positives = 258/471 (54%), Gaps = 34/471 (7%)
Query: 122 NQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTII 177
N + A +F ++ N+ +N +I ++ + KA + +M + + +++ +I
Sbjct: 65 NLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLI 124
Query: 178 KALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV 237
KA SE + + +Q+ ++ +V N
Sbjct: 125 KASSEMECVLVGEQTHSQIVRFGFQN---------------------------DVYVENS 157
Query: 238 MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITW 297
++ YA + A +F +M RD+ SW ++V G+ + G + A ++F EMP +N+ TW
Sbjct: 158 LVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTW 217
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
+ M+ GY ++ E+A+ +F ++ + + N V+V+ +C+ L L G++ ++ +
Sbjct: 218 SIMINGYAKNNCFEKAIDLFEFMKRE-GVVANETVMVSVISSCAHLGALEFGERAYEYVV 276
Query: 358 KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEA 417
K+ + + +AL++M+ +CG++ A +F EGL + D +SW+ +I A HG+ +A
Sbjct: 277 KSHMTVNLILGTALVDMFWRCGDIEKAIHVF-EGL-PETDSLSWSSIIKGLAVHGHAHKA 334
Query: 418 INLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD 477
++ F++M LGF DVT+ +L+ACSH GLVE+GL+ ++ + K+ I+ R +HY C+VD
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 478 LCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGT 537
+ GRAG+L EA N I + V + + G LL C ++ N ++ + V ++K++PE++G
Sbjct: 395 MLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGY 454
Query: 538 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGD 588
Y LLSN+YA G+W + ++R MK+K +KK PG S +E+ + F +GD
Sbjct: 455 YVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGD 505
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 159/327 (48%), Gaps = 47/327 (14%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
+ D+++ ++++ Y CG I A ++F G +DVV+WT++V GY K +E A +F
Sbjct: 149 QNDVYVENSLVHMYANCGFIAAAGRIF-GQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207
Query: 133 EMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTI-IKALSECGRIEDAQW 191
EMP RN+ +W+ MI+GYA+N EKA+DLF M VV+ T+ + +S C + ++
Sbjct: 208 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 192 HFNQMRERDVKSW--------TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
+ E VKS T +VD G ++ A +F+ +P + +SW+ +IKG A
Sbjct: 268 G-ERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLA 326
Query: 244 KNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG 303
+ +A+ F +M + GFI P+ +T+TA+++
Sbjct: 327 VHGHAHKAMHYFSQM----------ISLGFI---------------PRD--VTFTAVLSA 359
Query: 304 YVQHGLSEEALKIFNKLQADHALKP---NTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
GL E+ L+I+ ++ DH ++P + G V +LG LA + I K
Sbjct: 360 CSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLA------EAENFILKMH 413
Query: 361 FQESTYVVSALINMYSKCGELHIARRI 387
+ + ++ AL+ +A R+
Sbjct: 414 VKPNAPILGALLGACKIYKNTEVAERV 440
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 145/349 (41%), Gaps = 54/349 (15%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
N+ + G I A ++F +M RD+ W +M+ GY CG+++ AR++FD +++
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD-EMPHRNL 214
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER 168
TW+ ++NGY K N E+A LF M V + T++ + AL+ R E
Sbjct: 215 FTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEY 274
Query: 169 --------NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDA 220
N++ ++ CG IE A F + E D SW++++ GLA++G A
Sbjct: 275 VVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKA 334
Query: 221 RELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMP-----ERDMPSWNTLVT 271
F +M + V++ ++ + +++ LE++E M E + + +V
Sbjct: 335 MHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVD 394
Query: 272 GFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
+ G L AE +M +KPN
Sbjct: 395 MLGRAGKLAEAENFILKM-----------------------------------HVKPNAP 419
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
+LGAC +++ ++ K + S Y V L N+Y+ G+
Sbjct: 420 ILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYV-LLSNIYACAGQ 467
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 165/612 (26%), Positives = 293/612 (47%), Gaps = 102/612 (16%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD----------- 100
I C + A +F+ + +D WGTM+ Y G +E +LFD
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK 300
Query: 101 ------------GPDAMK---------------DVVTWTALVNGYVKLNQIEEAERLFYE 133
D +K DV T+L++ Y K ++E AE+LF
Sbjct: 301 VAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFIN 360
Query: 134 MPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSECGRIEDAQW- 191
+ +R+V SW+ MI Y + GQ ++A+ LFR M ++ + T+ L C + ++
Sbjct: 361 IEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLG 420
Query: 192 ---HFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKN 245
H ++ E ++++ T ++ A GR A + F+R+P+++ V++N + +GY +
Sbjct: 421 KSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQI 480
Query: 246 RRLDEALELFERMPERDMPSWNTLVTGFIQN----GDLNRAEKLFHEMP----------- 290
++A ++++ M + + + G +Q D R ++ ++
Sbjct: 481 GDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVA 540
Query: 291 -------------------------QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHA 325
+K+ ++W MM GY+ HG +EEA+ F +++ +
Sbjct: 541 HALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEK- 599
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
+PN TFV ++ A ++L+ L G +H + + F T V ++L++MY+KCG + +
Sbjct: 600 FQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSE 659
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
+ F E + + ++SWN M++AYA HG A++LF MQE + + V+++ +L+AC H
Sbjct: 660 KCFIE--ISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRH 717
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWG 505
AGLVEEG + F+++ + I+ +HYAC+VDL G+AG EA ++ + V S+ VWG
Sbjct: 718 AGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWG 777
Query: 506 PLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 565
LL +H N + +++K+EP N YS + E NV
Sbjct: 778 ALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYS-------QDRRLGEVNNV------SR 824
Query: 566 LKKQPGCSWVEV 577
+KK P CSW+EV
Sbjct: 825 IKKVPACSWIEV 836
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 157/626 (25%), Positives = 269/626 (42%), Gaps = 98/626 (15%)
Query: 43 SAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-- 100
S +K N I+ R D +R +FD + + + LW +MI GY G+ +EA F
Sbjct: 31 SGLKPHNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYM 90
Query: 101 ------GPD------AMK-------------------------DVVTWTALVNGYVKLNQ 123
PD A+K DV TALV Y K
Sbjct: 91 SEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARD 150
Query: 124 IEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKA 179
+ A ++F +M ++V +WNTM+ G A+NG + AL LF M V VS +I A
Sbjct: 151 LVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPA 210
Query: 180 LSE---------------------------------CGRIEDAQWHFNQMRERDVKSWTT 206
+S+ C + A+ F ++ +D SW T
Sbjct: 211 VSKLEKSDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 207 MVDGLAINGRVDDARELFDRM---PVR-NVVSWNVMIKGYAKNRRLDEALELFERMPER- 261
M+ A NG ++ ELFD M VR N V+ ++ A L + + + + ++
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 262 ---DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFN 318
D+ +L++ + + G+L AE+LF + ++V++W+AM+ Y Q G +EA+ +F
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
+ H +KPN T +VL C+ +A G+ IH K + +A+I+MY+KC
Sbjct: 391 DMMRIH-IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKC 449
Query: 379 GELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVE 438
G A + F+ L +D +++N + Y G +A +++ M+ G + T V
Sbjct: 450 GRFSPALKAFER--LPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVG 507
Query: 439 LLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA-CLVDLCGRAGRLKEAFNIIEGLGV 497
+L C+ G + +++K+ E H A L+++ + L A + + G
Sbjct: 508 MLQTCAFCSDYARGSCVYGQIIKHGFDS--ECHVAHALINMFTKCDALAAAIVLFDKCGF 565
Query: 498 DLSLSVWGPLLAGCNVHGNAD--IGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAA 555
+ S W ++ G +HG A+ + K+ K +P NA T+ + A + +
Sbjct: 566 EKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP-NAVTFVNIVRAAAELSALRVGM 624
Query: 556 NVRMKMKDKGLKKQPGCSWVEVGNTV 581
+V + G CS VGN++
Sbjct: 625 SVHSSLIQCGF-----CSQTPVGNSL 645
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 145/327 (44%), Gaps = 45/327 (13%)
Query: 171 VSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR 230
+++ ++ L EC + +K +++ ++ R D +R +FD +
Sbjct: 3 INYTNLLLMLRECKNFRCLLQVHGSLIVSGLKPHNQLINAYSLFQRQDLSRVIFDSVRDP 62
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPER----------------------------- 261
VV WN MI+GY + EAL F M E
Sbjct: 63 GVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRI 122
Query: 262 -----------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLS 310
D+ LV + + DL A ++F +M K+V+TW M++G Q+G S
Sbjct: 123 HDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCS 182
Query: 311 EEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSA 370
AL +F+ +++ + + + ++ A S L + + +H L+ K F + S
Sbjct: 183 SAALLLFHDMRS-CCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFA--FSSG 239
Query: 371 LINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
LI+MY C +L+ A +F+E + ++D SW M+AAYAH+G+ +E + LF+ M+ +
Sbjct: 240 LIDMYCNCADLYAAESVFEE--VWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVR 297
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFD 457
N V L A ++ G + +G+ D
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHD 324
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 147/342 (42%), Gaps = 62/342 (18%)
Query: 39 SSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL 98
+ + S ++ IS + GR A K F+R+P +D + + GY G +A K
Sbjct: 430 ADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIG---DANKA 486
Query: 99 FD----------GPDA-----MKDVVTWT--------------------------ALVNG 117
FD PD+ M + AL+N
Sbjct: 487 FDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINM 546
Query: 118 YVKLNQIEEAERLFYEMP-ERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVS 172
+ K + + A LF + E++ SWN M++GY +GQ E+A+ FR+M + N V+
Sbjct: 547 FTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVT 606
Query: 173 WNTIIKALSECGRIEDAQWHFNQMRERDVKSWT----TMVDGLAINGRVDDARELFDRMP 228
+ I++A +E + + + + S T ++VD A G ++ + + F +
Sbjct: 607 FVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEIS 666
Query: 229 VRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEK 284
+ +VSWN M+ YA + A+ LF M E D S+ ++++ G + ++
Sbjct: 667 NKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKR 726
Query: 285 LFHEMPQKNVIT-----WTAMMTGYVQHGLSEEALKIFNKLQ 321
+F EM +++ I + M+ + GL EA+++ +++
Sbjct: 727 IFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMR 768
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 172/608 (28%), Positives = 298/608 (49%), Gaps = 96/608 (15%)
Query: 59 GRIDDARKLFDRMPERD-LHLWGTMINGYIMCG-------VIKEARKL------------ 98
G I+ A ++FD+MPERD + +W MI G G + +E KL
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 99 -----FDGPDAMKDVVTWT-------------ALVNGYVKLNQIEEAERLFYE--MPERN 138
+ D K V + AL+ Y + +A +F E + R+
Sbjct: 197 LSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRD 256
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSECGRIEDAQWHFNQMR 197
++N +IDG A + E L +FR+M E ++ + T + + C
Sbjct: 257 QVTFNVVIDGLAGFKRDESLL-VFRKMLEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAI 315
Query: 198 ERDVKSWTTMVDG-LAINGRVDD---ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALE 253
+ + +T + + + + +D A ++F+ + +++V+WN MI Y + + A+
Sbjct: 316 KTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMS 375
Query: 254 LFERM------PER------------------------------DMPSWNTLVTGFIQNG 277
+++RM P+ + N L++ + +NG
Sbjct: 376 VYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNG 435
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFN-KLQADHALKPNTGTFVTV 336
+ +A+ LF +KN+I+W A+++G+ +G E L+ F+ L+++ + P+ T T+
Sbjct: 436 QIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTL 495
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR 396
L C + L G Q H + + + T + +ALINMYS+CG + + +F++ + ++
Sbjct: 496 LSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ--MSEK 553
Query: 397 DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV-TYVELLTACSHAGLVEEGLQY 455
D++SWN +I+AY+ HG G+ A+N + MQ+ G D T+ +L+ACSHAGLVEEGL+
Sbjct: 554 DVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEI 613
Query: 456 FDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIE------GLGVDLSLSVWGPLLA 509
F+ +++ + DH++CLVDL GRAG L EA ++++ G VD VW L +
Sbjct: 614 FNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVD----VWWALFS 669
Query: 510 GCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQ 569
C HG+ +GK+VAK +++ E ++ Y LSN+YA G WKEA R + G KQ
Sbjct: 670 ACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQ 729
Query: 570 PGCSWVEV 577
GCSW+ +
Sbjct: 730 RGCSWMRL 737
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 121/522 (23%), Positives = 223/522 (42%), Gaps = 98/522 (18%)
Query: 77 HLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE 136
HL T+ G + C I+ L++ Y +L + ++ F E+ E
Sbjct: 69 HLRDTIFGGQVHCYAIRSGLLCHSHVS--------NTLLSLYERLGNLASLKKKFDEIDE 120
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVS-WNTIIKALSECGRIEDAQWHFNQ 195
+V SW T++ + G E A ++F +MPER+ V+ WN +I E G E + F +
Sbjct: 121 PDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFRE 180
Query: 196 MRERDVK-------SWTTMVD-----------------GLAINGR--------------V 217
M + V+ + +M D G I V
Sbjct: 181 MHKLGVRHDKFGFATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVV 240
Query: 218 DDARELFDR--MPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNTLV---- 270
DA +F+ + VR+ V++NV+I G A +R DE+L +F +M E + P+ T V
Sbjct: 241 VDACLVFEETDVAVRDQVTFNVVIDGLAGFKR-DESLLVFRKMLEASLRPTDLTFVSVMG 299
Query: 271 -----------------TGF-----IQNG---------DLNRAEKLFHEMPQKNVITWTA 299
TG+ + N D A K+F + +K+++TW
Sbjct: 300 SCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNT 359
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
M++ Y Q L + A+ ++ ++ +KP+ TF ++L DL L + + I K
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHII-GVKPDEFTFGSLLATSLDLDVL---EMVQACIIKF 415
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAIN 419
+ +ALI+ YSK G++ A +F+ L +++LISWN +I+ + H+G+ E +
Sbjct: 416 GLSSKIEISNALISAYSKNGQIEKADLLFERSL--RKNLISWNAIISGFYHNGFPFEGLE 473
Query: 420 LFNKM--QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA-CLV 476
F+ + E+ + T LL+ C + G Q +L++ Q +E L+
Sbjct: 474 RFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHG--QFKETLIGNALI 531
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD 518
++ + G ++ + + + + + W L++ + HG +
Sbjct: 532 NMYSQCGTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGE 572
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/437 (22%), Positives = 194/437 (44%), Gaps = 40/437 (9%)
Query: 18 KTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLH 77
+ H I GY +S +T +++S+ +D A K+F+ + E+DL
Sbjct: 309 QVHGLAIKTGYEKYTLVSNATMTMYSSFED-------------FGAAHKVFESLEEKDLV 355
Query: 78 LWGTMINGYIMCGVIKEARKLFDGPDAM---KDVVTWTALVNGYVKLNQIEEAERLFYEM 134
W TMI+ Y + K A ++ + D T+ +L+ + L+ +E + +
Sbjct: 356 TWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLEMVQACIIKF 415
Query: 135 P-ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHF 193
+ N +I Y++NGQ EKA LF R +N++SWN II G + F
Sbjct: 416 GLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERF 475
Query: 194 NQMRERDVK------SWTTMVDGLAINGRVDDARE----LFDRMPVRNVVSWNVMIKGYA 243
+ + E +V+ + +T++ + + + + + N +I Y+
Sbjct: 476 SCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYS 535
Query: 244 KNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK-----NVITWT 298
+ + +LE+F +M E+D+ SWN+L++ + ++G+ A + M + + T++
Sbjct: 536 QCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFS 595
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
A+++ GL EE L+IFN + H + N F ++ L+E + + ++ K
Sbjct: 596 AVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEK 655
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS-WNGMIAAYAHHGYGKE- 416
T V AL + + G+L + + + + +++D S + + YA G KE
Sbjct: 656 T-IGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEA 714
Query: 417 -----AINLFNKMQELG 428
AIN+ M++ G
Sbjct: 715 EETRRAINMIGAMKQRG 731
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 14/213 (6%)
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
+TG + G + ALK+F + L+P+ + + L G Q+H ++
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 361 FQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINL 420
++V + L+++Y + G L ++ FDE + + D+ SW +++A G + A +
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDE--IDEPDVYSWTTLLSASFKLGDIEYAFEV 145
Query: 421 FNKMQELGFQANDVT-YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH--YACLVD 477
F+KM E +DV + ++T C +G E ++ F ++ K + VR D +A ++
Sbjct: 146 FDKMPE----RDDVAIWNAMITGCKESGYHETSVELFREMHK---LGVRHDKFGFATILS 198
Query: 478 LC--GRAGRLKEAFNIIEGLGVDLSLSVWGPLL 508
+C G K+ +++ G ++ SV L+
Sbjct: 199 MCDYGSLDFGKQVHSLVIKAGFFIASSVVNALI 231
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/549 (31%), Positives = 269/549 (48%), Gaps = 82/549 (14%)
Query: 64 ARKLFDRMPERDLHLWGTMINGYIMCGVIKEA--------RK-----LFDGPDAMKDV-- 108
AR +F+ + +++W +MI GY +A RK F P +K
Sbjct: 60 ARSVFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSG 119
Query: 109 ---VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
+ + + V+G+V E N+ ++ Y G+ L +F +
Sbjct: 120 LRDIQFGSCVHGFVVKTGFE-----------VNMYVSTCLLHMYMCCGEVNYGLRVFEDI 168
Query: 166 PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKS-WTTMVDGLAINGRVDDA---- 220
P+ NVV+W ++I R DA F +M+ VK+ T MVD L GR D
Sbjct: 169 PQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGK 228
Query: 221 -----------RELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTL 269
F NV+ +I YAK L A LF+ MPER + SWN++
Sbjct: 229 WFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSI 288
Query: 270 VTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
+TG+ QNGD +EEAL +F + D + P+
Sbjct: 289 ITGYSQNGD-------------------------------AEEALCMFLDM-LDLGIAPD 316
Query: 330 TGTFVTVLGACSDLAGLNE-GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
TF++V+ A S + G ++ GQ IH +SKT F + +V AL+NMY+K G+ A++ F
Sbjct: 317 KVTFLSVIRA-SMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAF 375
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND-VTYVELLTACSHAG 447
++ L ++D I+W +I A HG+G EA+++F +MQE G D +TY+ +L ACSH G
Sbjct: 376 ED--LEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIG 433
Query: 448 LVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPL 507
LVEEG +YF ++ ++ +HY C+VD+ RAGR +EA +++ + V ++++WG L
Sbjct: 434 LVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGAL 493
Query: 508 LAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
L GC++H N ++ + + + E +G Y LLSN+YA G+W + +R MK K +
Sbjct: 494 LNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVD 553
Query: 568 KQPGCSWVE 576
K G S VE
Sbjct: 554 KVLGHSSVE 562
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 126/249 (50%), Gaps = 13/249 (5%)
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
+L+ A +F + +V W +M+ GY ++AL IF + P+ TF VL
Sbjct: 56 NLSYARSVFESIDCPSVYIWNSMIRGYSNSPNPDKAL-IFYQEMLRKGYSPDYFTFPYVL 114
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRD 397
ACS L + G +H + KT F+ + YV + L++MY CGE++ R+F++ + Q +
Sbjct: 115 KACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFED--IPQWN 172
Query: 398 LISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQY-- 455
+++W +I+ + ++ +AI F +MQ G +AN+ V+LL AC + G +
Sbjct: 173 VVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHG 232
Query: 456 ------FDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLA 509
FD +++ + L+D+ + G L+ A + +G+ + +L W ++
Sbjct: 233 FLQGLGFDPYFQSK-VGFNVILATSLIDMYAKCGDLRTARYLFDGMP-ERTLVSWNSIIT 290
Query: 510 GCNVHGNAD 518
G + +G+A+
Sbjct: 291 GYSQNGDAE 299
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/415 (22%), Positives = 179/415 (43%), Gaps = 82/415 (19%)
Query: 30 FLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMC 89
F M ST LH M C G ++ ++F+ +P+ ++ WG++I+G++
Sbjct: 138 FEVNMYVSTCLLHMYM---------CC--GEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 90 GVIKEARKLF-----DGPDA--------------MKDVVT--W----------------- 111
+A + F +G A KD+VT W
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 112 --------TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFR 163
T+L++ Y K + A LF MPER + SWN++I GY++NG E+AL +F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 164 RMPERNV----VSWNTIIKA--LSECGRIEDAQWHFNQMRE--RDVKSWTTMVDGLAING 215
M + + V++ ++I+A + C ++ + + +D +V+ A G
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTG 366
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER-----DMPSWNTLV 270
+ A++ F+ + ++ ++W V+I G A + +EAL +F+RM E+ D ++ ++
Sbjct: 367 DAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 271 TGFIQNGDLNRAEKLFHEMP-----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHA 325
G + ++ F EM + V + M+ + G EEA ++ +
Sbjct: 427 YACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTM----P 482
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT-AFQESTYVVSALINMYSKCG 379
+KPN + +L C L +I ++++ YV+ L N+Y+K G
Sbjct: 483 VKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVL--LSNIYAKAG 535
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 137/460 (29%), Positives = 257/460 (55%), Gaps = 23/460 (5%)
Query: 118 YVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTII 177
++K + A ++F E+P+ + ++N MI GY ++G ++ L L +RM
Sbjct: 79 HLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRM------------ 126
Query: 178 KALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNV 237
S G D + + + + +TM+ ++ R+ AR + + + +V+
Sbjct: 127 ---SYSGEKADG-YTLSMVLKASNSRGSTMILPRSL-CRLVHARIIKCDVELDDVL-ITA 180
Query: 238 MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITW 297
++ Y K+ +L+ A +FE M + ++ ++++G++ G + AE++F+ K+++ +
Sbjct: 181 LVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVY 240
Query: 298 TAMMTGYVQHG-LSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
AM+ G+ + G ++ ++ ++ +Q PN TF +V+GACS L GQQ+H I
Sbjct: 241 NAMVEGFSRSGETAKRSVDMYISMQR-AGFHPNISTFASVIGACSVLTSHEVGQQVHAQI 299
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
K+ + S+L++MY+KCG ++ ARR+FD+ ++++++ SW MI Y +G +E
Sbjct: 300 MKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQ--MQEKNVFSWTSMIDGYGKNGNPEE 357
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
A+ LF +M+E + N VT++ L+ACSH+GLV++G + F+ + ++ S++ + +HYAC+V
Sbjct: 358 ALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIV 417
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPEN-A 535
DL GRAG L +AF + +W LL+ CN+HGN ++ + A ++ K+ +
Sbjct: 418 DLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRP 477
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWV 575
G Y LSN+YAS KW + +R MK + + K G SW
Sbjct: 478 GAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSWT 517
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 143/285 (50%), Gaps = 44/285 (15%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKD--VVTWTALVNGYVKLNQIEEAERL 130
E D L +++ Y+ G ++ AR +F+ MKD VV T++++GY+ +E+AE +
Sbjct: 172 ELDDVLITALVDTYVKSGKLESARTVFE---TMKDENVVCCTSMISGYMNQGFVEDAEEI 228
Query: 131 FYEMPERNVRSWNTMIDGYARNGQTEK-ALDLFRRMPER----NVVSWNTIIKALSECGR 185
F +++ +N M++G++R+G+T K ++D++ M N+ ++ ++I A S
Sbjct: 229 FNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTS 288
Query: 186 IEDAQWHFNQMRERDV----KSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKG 241
E Q Q+ + V K ++++D A G ++DAR +FD+M +NV SW MI G
Sbjct: 289 HEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDG 348
Query: 242 YAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMM 301
Y KN +EALELF RM E F P N +T+ +
Sbjct: 349 YGKNGNPEEALELFTRMKE-------------------------FRIEP--NYVTFLGAL 381
Query: 302 TGYVQHGLSEEALKIFNKLQADHALKP---NTGTFVTVLGACSDL 343
+ GL ++ +IF +Q D+++KP + V ++G DL
Sbjct: 382 SACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDL 426
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 193/395 (48%), Gaps = 59/395 (14%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVT-WTALVNGYVKLNQIEE----A 127
+ DL++ ++ ++ CG + AR++FD + K ++ + +++GY+K ++E
Sbjct: 66 QPDLNISIKLLILHLKCGCLSYARQVFD--ELPKPTLSAYNYMISGYLKHGLVKELLLLV 123
Query: 128 ERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSW-----NTIIKALSE 182
+R+ Y + + + + ++ G T R+ ++ + +I AL +
Sbjct: 124 QRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVD 183
Query: 183 ----CGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVM 238
G++E A+ F M++ +V T+M+ G G V+DA E+F+ V+++V +N M
Sbjct: 184 TYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAM 243
Query: 239 IKGYAKN-----RRLDEAL---------------------------ELFERMPERDMPS- 265
++G++++ R +D + E+ +++ + M S
Sbjct: 244 VEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSG 303
Query: 266 -------WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFN 318
++L+ + + G +N A ++F +M +KNV +WT+M+ GY ++G EEAL++F
Sbjct: 304 VYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFT 363
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT-AFQESTYVVSALINMYSK 377
+++ + ++PN TF+ L ACS +++G +I + + + + + + ++++ +
Sbjct: 364 RMK-EFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGR 422
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
G+L+ A F + + D W ++++ HG
Sbjct: 423 AGDLNKAFE-FARAMPERPDSDIWAALLSSCNLHG 456
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 113/249 (45%), Gaps = 57/249 (22%)
Query: 37 STSSLHSAMKD-----CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGV 91
S ++ MKD C + IS +G ++DA ++F+ +D+ ++ M+ G+ G
Sbjct: 193 SARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSG- 251
Query: 92 IKEARKLFDGPDAMK------DVVTW---------------------------------- 111
+ A++ D +M+ ++ T+
Sbjct: 252 -ETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKM 310
Query: 112 -TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE-RN 169
++L++ Y K I +A R+F +M E+NV SW +MIDGY +NG E+AL+LF RM E R
Sbjct: 311 GSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRI 370
Query: 170 VVSWNTIIKALSECGR--IEDAQWHFNQMRERD------VKSWTTMVDGLAINGRVDDAR 221
++ T + ALS C + D + + +RD ++ + +VD + G ++ A
Sbjct: 371 EPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAF 430
Query: 222 ELFDRMPVR 230
E MP R
Sbjct: 431 EFARAMPER 439
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 349 GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAY 408
G++IH I KT FQ + L+ ++ KCG L AR++FDE L + L ++N MI+ Y
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDE--LPKPTLSAYNYMISGY 110
Query: 409 AHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR----S 464
HG KE + L +M G +A+ T +L A + G + +L+ R
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 465 IQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
+++ + LVD ++G+L+ A + E +
Sbjct: 171 VELDDVLITALVDTYVKSGKLESARTVFETM 201
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/207 (21%), Positives = 99/207 (47%), Gaps = 13/207 (6%)
Query: 39 SSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL 98
S +++ +K ++ + + G I+DAR++FD+M E+++ W +MI+GY G +EA +L
Sbjct: 302 SGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALEL 361
Query: 99 FDGPDAMK---DVVTWTALVNGYVKLNQIEEAERLFYEMP-----ERNVRSWNTMIDGYA 150
F + + VT+ ++ +++ +F M + + + ++D
Sbjct: 362 FTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMG 421
Query: 151 RNGQTEKALDLFRRMPER-NVVSWNTIIKALSECGRIEDAQWHFNQM----RERDVKSWT 205
R G KA + R MPER + W ++ + + G +E A +++ ++ ++
Sbjct: 422 RAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYL 481
Query: 206 TMVDGLAINGRVDDARELFDRMPVRNV 232
+ + A N + D+ ++ + M R +
Sbjct: 482 ALSNVYASNDKWDNVSKIREVMKRRRI 508
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/614 (26%), Positives = 292/614 (47%), Gaps = 92/614 (14%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD------- 100
C + + G + +A ++F R+P + W M++GY A ++F
Sbjct: 288 CTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGV 347
Query: 101 --------------GPDAM----KDVVTWT-------------ALVNGYVKLNQIEEAER 129
G +M V W AL++ Y K I+ +E+
Sbjct: 348 EINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQ 407
Query: 130 LFYEMPERNVRSW-NTMIDGYARNGQTEKALDLFRRM-------PERNVVSWNTIIKALS 181
+F ++ + ++ N MI ++++ + KA+ LF RM E +V S +++ L+
Sbjct: 408 VFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLN 467
Query: 182 ECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKG 241
++ + D+ +++ + G ++++ +LF +P ++ W MI G
Sbjct: 468 LGKQVHG--YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525
Query: 242 YAKNRRLDEALELFERM-------------------------P--------------ERD 262
+ + L EA+ LF M P ++
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG 585
Query: 263 MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIF-NKLQ 321
M + LV + + G L A +++ +P+ + ++ +++++GY QHGL ++ +F + +
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM 645
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
+ + + + A SD + L G Q+H I+K V S+L+ MYSK G +
Sbjct: 646 SGFTMDSFAISSILKAAALSDESSL--GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSI 703
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
+ F + + DLI+W +IA+YA HG EA+ ++N M+E GF+ + VT+V +L+
Sbjct: 704 DDCCKAFSQ--INGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSL 501
ACSH GLVEE + + ++K+ I+ HY C+VD GR+GRL+EA + I + +
Sbjct: 762 ACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 502 SVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKM 561
VWG LLA C +HG ++GK+ AKK +++EP +AG Y LSN+ A VG+W E R M
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLM 881
Query: 562 KDKGLKKQPGCSWV 575
K G++K+PG S V
Sbjct: 882 KGTGVQKEPGWSSV 895
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/561 (24%), Positives = 242/561 (43%), Gaps = 103/561 (18%)
Query: 58 EGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD----------------- 100
G + DA KLFD +P+ D+ MI+GY + +E+ + F
Sbjct: 97 SGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSV 156
Query: 101 --------GPDAMKDV-------------VTWTALVNGYVKLNQIEEAERLFYEMPERNV 139
P + V V +AL++ + K + E+A ++F + NV
Sbjct: 157 ISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANV 216
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKALSECGRIED------A 189
WNT+I G RN DLF M + + ++++++ A C +E
Sbjct: 217 YCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAA---CASLEKLRFGKVV 273
Query: 190 QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLD 249
Q + DV T +VD A G + +A E+F R+P +VVSW VM+ GY K+
Sbjct: 274 QARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAF 333
Query: 250 EALELFERMPERDMPSWNTLVTGFI----------------------------------- 274
ALE+F+ M + N VT I
Sbjct: 334 SALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALI 393
Query: 275 ----QNGDLNRAEKLFHEM---PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
++GD++ +E++F ++ ++N++ M+T + Q +A+++F ++ + L+
Sbjct: 394 SMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE-GLR 450
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
+ + ++L S L LN G+Q+H K+ V S+L +YSKCG L + ++
Sbjct: 451 TDEFSVCSLL---SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 388 FDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAG 447
F + +D W MI+ + +GY +EAI LF++M + G ++ T +LT CS
Sbjct: 508 FQG--IPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHP 565
Query: 448 LVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPL 507
+ G + L+ I D + LV++ + G LK A + + L +L L
Sbjct: 566 SLPRGKEIHGYTLR-AGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSL 623
Query: 508 LAGCNVHGNADIGKLVAKKIL 528
++G + HG G L+ + ++
Sbjct: 624 ISGYSQHGLIQDGFLLFRDMV 644
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 211/463 (45%), Gaps = 69/463 (14%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
DV +L++ Y + +A +LF +P+ +V S N MI GY ++ E++L F +M
Sbjct: 83 DVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMH 142
Query: 167 ----ERNVVSWNTIIKALSE----------CGRIEDAQWHFNQMRERDVKSWTTMVDGLA 212
E N +S+ ++I A S C + F ++ E + ++D +
Sbjct: 143 FLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVE------SALIDVFS 196
Query: 213 INGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM------PE------ 260
N R +DA ++F NV WN +I G +N+ +LF M P+
Sbjct: 197 KNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSS 256
Query: 261 --------------------------RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV 294
D+ +V + + G + A ++F +P +V
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
++WT M++GY + + AL+IF +++ ++ N T +V+ AC + + E Q+H
Sbjct: 317 VSWTVMLSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVTSVISACGRPSMVCEASQVHA 375
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
+ K+ F + V +ALI+MYSK G++ ++ ++F++ QR I N MI +++
Sbjct: 376 WVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV-NVMITSFSQSKKP 434
Query: 415 KEAINLFNKMQELGFQANDVTYVELLTA--CSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
+AI LF +M + G + ++ + LL+ C + G G L+ + ++
Sbjct: 435 GKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVG------ 488
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG 515
+ L L + G L+E++ + +G+ + + W +++G N +G
Sbjct: 489 SSLFTLYSKCGSLEESYKLFQGIPFKDN-ACWASMISGFNEYG 530
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 35/235 (14%)
Query: 365 TYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM 424
++ +L++ YS G + A ++FD + Q D++S N MI+ Y H +E++ F+KM
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDT--IPQPDVVSCNIMISGYKQHRLFEESLRFFSKM 141
Query: 425 QELGFQANDVTYVELLTACS--HAGLVEEGL--------QYFDKLLKNRSIQV------R 468
LGF+AN+++Y +++ACS A L E + +F +++++ I V
Sbjct: 142 HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 469 EDHYACLVDLCGR---------AGRLKE-----AFNIIEGLGVDLSLS---VWGPLLAGC 511
ED Y D AG L+ F++ + V + +LA C
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAAC 261
Query: 512 NVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
GK+V +++K E+ + + ++YA G EA V ++ + +
Sbjct: 262 ASLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSV 316
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 125/327 (38%), Positives = 193/327 (59%), Gaps = 3/327 (0%)
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
L+ + +GDL A LF + +++I W AM++GYVQ GL +E L I+ ++ + + P
Sbjct: 149 LLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIV-P 207
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
+ TF +V ACS L L G++ H ++ K + + V SAL++MY KC R+F
Sbjct: 208 DQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVF 267
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGL 448
D+ L R++I+W +I+ Y +HG E + F KM+E G + N VT++ +LTAC+H GL
Sbjct: 268 DQ--LSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGL 325
Query: 449 VEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLL 508
V++G ++F + ++ I+ HYA +VD GRAGRL+EA+ + VWG LL
Sbjct: 326 VDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLL 385
Query: 509 AGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 568
C +HGN + +L A K L+++P N G Y + +N YAS G + A+ VR KM++ G+KK
Sbjct: 386 GACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKK 445
Query: 569 QPGCSWVEVGNTVQVFVVGDKSHSQSE 595
PG S +E+ V F+ D SH SE
Sbjct: 446 DPGYSQIELQGEVHRFMKDDTSHRLSE 472
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 118/313 (37%), Gaps = 80/313 (25%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA-------------------RKLF 99
G + A LF + RDL W MI+GY+ G+ +E +F
Sbjct: 157 GDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVF 216
Query: 100 DGPDAM-------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
A+ +++ +ALV+ Y K + + R+F ++ RNV
Sbjct: 217 RACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVI 276
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQM 196
+W ++I GY +G+ + L F +M E N V++ ++ A + G ++ HF M
Sbjct: 277 TWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSM 336
Query: 197 R-----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEA 251
+ E + + + MVD L GR+ +A E + P +
Sbjct: 337 KRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKE-------------------- 376
Query: 252 LELFERMPERDMPSWNTLVTGFIQNGD---LNRAEKLFHEMPQKNVITWTAMMTGYVQHG 308
P W +L+ +G+ L A F E+ N + GY G
Sbjct: 377 ----------HPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCG 426
Query: 309 LSEEALKIFNKLQ 321
L E A K+ K++
Sbjct: 427 LREAASKVRRKME 439
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 212 AINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE-RDMPSWNTLV 270
A++G + A LF + +R+++ WN MI GY + E L ++ M + R +P T
Sbjct: 154 ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFA 213
Query: 271 TGFIQNGDLNRAE--------------------------------------KLFHEMPQK 292
+ F L+R E ++F ++ +
Sbjct: 214 SVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR 273
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG-QQ 351
NVITWT++++GY HG E LK F K++ + +PN TF+ VL AC+ +++G +
Sbjct: 274 NVITWTSLISGYGYHGKVSEVLKCFEKMK-EEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 352 IHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHH 411
+ + + +A+++ + G L A + ++ + W ++ A H
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPV-WGSLLGACRIH 391
Query: 412 G 412
G
Sbjct: 392 G 392
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 153/515 (29%), Positives = 266/515 (51%), Gaps = 57/515 (11%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV--- 170
L++ Y+K ++ A +LF + +R+V SW MI ++R G AL LF+ M +V
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 171 -VSWNTIIKALSECGRIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDARELFD 225
++ +++K+ + G +++ + + + + ++ A G++++AR FD
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 172
Query: 226 RMPVRNVVSWNVMIKGYAKNRRLDEALELFERM------PE------------------- 260
M R++VSWN MI GY N D + LF+ M P+
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 232
Query: 261 --------------RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQ 306
R +LV +++ G L A KL ++++++ TA++TG+ Q
Sbjct: 233 VSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQ 292
Query: 307 -HGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA-FQES 364
+ + +A IF + K + ++L C+ +A + G+QIH K++ +
Sbjct: 293 QNNCTSDAFDIFKDM-IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFD 351
Query: 365 TYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM 424
+ ++LI+MY+K GE+ A F+E ++++D+ SW +IA Y HG ++AI+L+N+M
Sbjct: 352 VALGNSLIDMYAKSGEIEDAVLAFEE--MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRM 409
Query: 425 QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGR 484
+ + NDVT++ LL+ACSH G E G + +D ++ I+ RE+H +C++D+ R+G
Sbjct: 410 EHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGY 469
Query: 485 LKEAFNII---EGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLL 541
L+EA+ +I EG+ V LS S WG L C HGN + K+ A ++L +EP Y L
Sbjct: 470 LEEAYALIRSKEGI-VSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINL 528
Query: 542 SNMYASVGKWKEAANVRMKMKDKG-LKKQPGCSWV 575
+++YA+ G W A N R MK+ G K PG S V
Sbjct: 529 ASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/452 (23%), Positives = 197/452 (43%), Gaps = 104/452 (23%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF----------------- 99
++G + ARKLFDR+ +RD+ W MI+ + CG +A LF
Sbjct: 59 KQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGS 118
Query: 100 ---------------------DGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERN 138
+ + +++ +AL++ Y + ++EEA F M ER+
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRM------PE------------------------- 167
+ SWN MIDGY N + + LF+ M P+
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 168 --------RNVVSWNTIIKALSECGRIEDAQWHFNQ-MRERDVKSWTTMVDGLA-INGRV 217
R+ +++ A +CG + +A W ++ ++RD+ S T ++ G + N
Sbjct: 239 LAIKLGFGRSSALIRSLVNAYVKCGSLANA-WKLHEGTKKRDLLSCTALITGFSQQNNCT 297
Query: 218 DDARELF----------DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWN 267
DA ++F D + V +++ I R++ L D+ N
Sbjct: 298 SDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQI-HGFALKSSQIRFDVALGN 356
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALK 327
+L+ + ++G++ A F EM +K+V +WT+++ GY +HG E+A+ ++N+++ + +K
Sbjct: 357 SLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHER-IK 415
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQ-LISKTAFQESTYVVSALINMYSKCGELHIARR 386
PN TF+++L ACS G +I+ +I+K + +S +I+M ++ G L A
Sbjct: 416 PNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAY- 474
Query: 387 IFDEGLLRQRDLI------SWNGMIAAYAHHG 412
L+R ++ I +W + A HG
Sbjct: 475 ----ALIRSKEGIVSLSSSTWGAFLDACRRHG 502
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/421 (21%), Positives = 168/421 (39%), Gaps = 81/421 (19%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAM------ 105
G++++AR FD M ERDL W MI+GY + LF PD
Sbjct: 162 GKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLL 221
Query: 106 -------------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
+ +LVN YVK + A +L +R++
Sbjct: 222 RASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLL 281
Query: 141 SWNTMIDGYA-RNGQTEKALDLFR-------RMPERNVVSW---NTIIKALSECGRIEDA 189
S +I G++ +N T A D+F+ +M E V S T I +++ +I
Sbjct: 282 SCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGF 341
Query: 190 QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLD 249
+Q+R DV +++D A +G ++DA F+ M ++V SW +I GY ++ +
Sbjct: 342 ALKSSQIR-FDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFE 400
Query: 250 EALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGL 309
+A++L+ RM HE + N +T+ ++++ G
Sbjct: 401 KAIDLYNRME---------------------------HERIKPNDVTFLSLLSACSHTGQ 433
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ-IHQLISKTAFQESTYVV 368
+E KI++ + H ++ ++ + L E I + ST+
Sbjct: 434 TELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTW-- 491
Query: 369 SALINMYSKCGELHIARRIFDEGL-LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL 427
A ++ + G + +++ + L + R +++ + + YA +G A+N M+E
Sbjct: 492 GAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKES 551
Query: 428 G 428
G
Sbjct: 552 G 552
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 234/411 (56%), Gaps = 11/411 (2%)
Query: 174 NTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-NV 232
N+++ CG +A F +M RDV SWT ++ G G +A + F +M V N+
Sbjct: 145 NSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNL 204
Query: 233 VSWNVMI--KGYAKNRRLDEALE--LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHE 288
++ ++ G L + + + +R + + N L+ +++ L+ A ++F E
Sbjct: 205 ATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGE 264
Query: 289 MPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
+ +K+ ++W +M++G V S+EA+ +F+ +Q +KP+ +VL AC+ L ++
Sbjct: 265 LEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDH 324
Query: 349 GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAY 408
G+ +H+ I + T++ +A+++MY+KCG + A IF+ +R +++ +WN ++
Sbjct: 325 GRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNG--IRSKNVFTWNALLGGL 382
Query: 409 AHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQV- 467
A HG+G E++ F +M +LGF+ N VT++ L AC H GLV+EG +YF K +K+R +
Sbjct: 383 AIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHK-MKSREYNLF 441
Query: 468 -REDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN-ADIGKLVAK 525
+ +HY C++DL RAG L EA +++ + V + + G +L+ C G ++ K +
Sbjct: 442 PKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILD 501
Query: 526 KILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVE 576
L IE E++G Y LLSN++A+ +W + A +R MK KG+ K PG S++E
Sbjct: 502 SFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 157/351 (44%), Gaps = 66/351 (18%)
Query: 55 LCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWT-- 112
+C E R +A K+F MP RD+ W +I G+ G+ KEA F D ++ T+
Sbjct: 153 VCGESR--NACKVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVEPNLATYVCV 210
Query: 113 ---------------------------------ALVNGYVKLNQIEEAERLFYEMPERNV 139
AL++ YVK Q+ +A R+F E+ +++
Sbjct: 211 LVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDK 270
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRM-------PERNVVSWNTIIKALSECGRIEDAQWH 192
SWN+MI G ++++A+DLF M P+ ++++ +++ A + G ++ +W
Sbjct: 271 VSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILT--SVLSACASLGAVDHGRWV 328
Query: 193 FNQMRERDVKSW-----TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRR 247
+ +K W T +VD A G ++ A E+F+ + +NV +WN ++ G A +
Sbjct: 329 HEYILTAGIK-WDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGH 387
Query: 248 LDEALELFERMPERDM-PSWNTLVTGF---IQNGDLNRAEKLFHEMPQK--NVIT----W 297
E+L FE M + P+ T + G ++ + FH+M + N+ +
Sbjct: 388 GLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHY 447
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
M+ + GL +EAL++ + +KP+ +L AC + L E
Sbjct: 448 GCMIDLLCRAGLLDEALELVKAM----PVKPDVRICGAILSACKNRGTLME 494
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 147/300 (49%), Gaps = 19/300 (6%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM 134
D+++ ++++ Y +CG + A K+F G ++DVV+WT ++ G+ + +EA F +M
Sbjct: 140 DIYVQNSLVHFYGVCGESRNACKVF-GEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM 198
Query: 135 P-ERNVRSWNTMIDGYARNG--QTEKALD--LFRRMPERNVVSWNTIIKALSECGRIEDA 189
E N+ ++ ++ R G K + + +R ++ + N +I +C ++ DA
Sbjct: 199 DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDA 258
Query: 190 QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVS-----WNVMIKGYAK 244
F ++ ++D SW +M+ GL R +A +LF M + + ++ A
Sbjct: 259 MRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACAS 318
Query: 245 NRRLDEALELFERMPERDMPSWNT-----LVTGFIQNGDLNRAEKLFHEMPQKNVITWTA 299
+D + E + + W+T +V + + G + A ++F+ + KNV TW A
Sbjct: 319 LGAVDHGRWVHEYILTAGI-KWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNA 377
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ-IHQLISK 358
++ G HG E+L+ F ++ KPN TF+ L AC ++EG++ H++ S+
Sbjct: 378 LLGGLAIHGHGLESLRYFEEM-VKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSR 436
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
K + P+ TF V AC +G+ EG+QIH +++K F + YV ++L++ Y C
Sbjct: 95 KTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVC 154
Query: 379 GELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVE 438
GE A ++F E + RD++SW G+I + G KEA++ F+KM + N TYV
Sbjct: 155 GESRNACKVFGE--MPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVC 209
Query: 439 LLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVD 498
+L + G + G +LK S+ E A L+D+ + +L +A + L
Sbjct: 210 VLVSSGRVGCLSLGKGIHGLILKRASLISLETGNA-LIDMYVKCEQLSDAMRVFGELEKK 268
Query: 499 LSLSVWGPLLAG 510
+S W +++G
Sbjct: 269 DKVS-WNSMISG 279
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 244 bits (624), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 140/458 (30%), Positives = 247/458 (53%), Gaps = 30/458 (6%)
Query: 121 LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKA 179
L+ + A R+F + NV +N MI Y+ G ++L F M R + T
Sbjct: 49 LSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPL 108
Query: 180 LSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMI 239
L C + D ++ G ++G + R F R+ + ++
Sbjct: 109 LKSCSSLSDLRF------------------GKCVHGEL--IRTGFHRLGKIRIG----VV 144
Query: 240 KGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTA 299
+ Y R+ +A ++F+ M ER++ WN ++ GF +GD+ R LF +M ++++++W +
Sbjct: 145 ELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNS 204
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
M++ + G EAL++F ++ D P+ T VTVL + L L+ G+ IH +
Sbjct: 205 MISSLSKCGRDREALELFCEM-IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESS 263
Query: 360 A-FQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAI 418
F++ V +AL++ Y K G+L A IF + +++R+++SWN +I+ A +G G+ I
Sbjct: 264 GLFKDFITVGNALVDFYCKSGDLEAATAIFRK--MQRRNVVSWNTLISGSAVNGKGEFGI 321
Query: 419 NLFNKMQELGFQA-NDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD 477
+LF+ M E G A N+ T++ +L CS+ G VE G + F +++ ++ R +HY +VD
Sbjct: 322 DLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVD 381
Query: 478 LCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGT 537
L R+GR+ EAF ++ + V+ + ++WG LL+ C HG+ + ++ A +++KIEP N+G
Sbjct: 382 LMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGN 441
Query: 538 YSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWV 575
Y LLSN+YA G+W++ VR MK L+K G S +
Sbjct: 442 YVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 42/310 (13%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVS 172
+V Y ++ +A+++F EM ERNV WN MI G+ +G E+ L LF++M ER++VS
Sbjct: 142 GVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVS 201
Query: 173 WNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMP 228
WN++I +LS+CGR +A F +M ++ D + T++ A G +D + +
Sbjct: 202 WNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAE 261
Query: 229 VRN-----VVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAE 283
+ N ++ Y K+ L+ A +F +M R++ SWNTL++G NG
Sbjct: 262 SSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGK----- 316
Query: 284 KLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
E + +F+ + + + PN TF+ VL CS
Sbjct: 317 --------------------------GEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYT 350
Query: 344 AGLNEGQQIHQL-ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWN 402
+ G+++ L + + + T A++++ S+ G + A + F + + + W
Sbjct: 351 GQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFK-FLKNMPVNANAAMWG 409
Query: 403 GMIAAYAHHG 412
+++A HG
Sbjct: 410 SLLSACRSHG 419
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 129/276 (46%), Gaps = 28/276 (10%)
Query: 86 YIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTM 145
Y G + +A+K+FD + ++VV W ++ G+ +E LF +M ER++ SWN+M
Sbjct: 147 YTSGGRMGDAQKVFD-EMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSM 205
Query: 146 IDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSECGRIEDAQW-HFNQMRE 198
I ++ G+ +AL+LF M P+ V T++ + G ++ +W H
Sbjct: 206 ISSLSKCGRDREALELFCEMIDQGFDPDEATVV--TVLPISASLGVLDTGKWIHSTAESS 263
Query: 199 RDVKSWTT----MVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALEL 254
K + T +VD +G ++ A +F +M RNVVSWN +I G A N + + ++L
Sbjct: 264 GLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDL 323
Query: 255 FERMPERDMPSWNT-----LVTGFIQNGDLNRAEKLFHEMPQKNVIT-----WTAMMTGY 304
F+ M E + N ++ G + R E+LF M ++ + + AM+
Sbjct: 324 FDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLM 383
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC 340
+ G EA K + + N + ++L AC
Sbjct: 384 SRSGRITEAFKFLKNMPVN----ANAAMWGSLLSAC 415
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 142/327 (43%), Gaps = 56/327 (17%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGY 118
GR+ DA+K+FD M ER++ +W MI G+ G ++ LF + + +V+W ++++
Sbjct: 151 GRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFK-QMSERSIVSWNSMISSL 209
Query: 119 VKLNQIEEAERLFYEMPER----------------------NVRSW-------------- 142
K + EA LF EM ++ + W
Sbjct: 210 SKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDF 269
Query: 143 ----NTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRE 198
N ++D Y ++G E A +FR+M RNVVSWNT+I + G+ E F+ M E
Sbjct: 270 ITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIE 329
Query: 199 R-----DVKSWTTMVDGLAINGRVDDARELFDRMPVR-----NVVSWNVMIKGYAKNRRL 248
+ ++ ++ + G+V+ ELF M R + M+ +++ R+
Sbjct: 330 EGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRI 389
Query: 249 DEALELFERMP-ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ---KNVITWTAMMTGY 304
EA + + MP + W +L++ +GD+ AE E+ + N + + Y
Sbjct: 390 TEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLY 449
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTG 331
+ G ++ K+ L + L+ +TG
Sbjct: 450 AEEGRWQDVEKV-RTLMKKNRLRKSTG 475
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 103/243 (42%), Gaps = 50/243 (20%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF--------- 99
N I C G ++ LF +M ER + W +MI+ CG +EA +LF
Sbjct: 172 NLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFD 231
Query: 100 -----------------------------DGPDAMKDVVT-WTALVNGYVKLNQIEEAER 129
+ KD +T ALV+ Y K +E A
Sbjct: 232 PDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATA 291
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN--TIIKALSEC---G 184
+F +M RNV SWNT+I G A NG+ E +DLF M E V+ N T + L+ C G
Sbjct: 292 IFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 185 RIEDAQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVM 238
++E + F M ER + + MVD ++ +GR+ +A + MPV N W +
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSL 411
Query: 239 IKG 241
+
Sbjct: 412 LSA 414
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 128/429 (29%), Positives = 237/429 (55%), Gaps = 13/429 (3%)
Query: 179 ALSECGRIEDAQWHFNQM-RERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV----- 232
A+S G + AQ F+ + W ++ G + + ++ ++RM + +V
Sbjct: 48 AVSVTGSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDL 107
Query: 233 VSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHE 288
++N +K + + + + LE+ + D +LV + NG + A K+F E
Sbjct: 108 FTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDE 167
Query: 289 MPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
MP +++++W M+ + GL +AL ++ ++ + + ++ T V +L +C+ ++ LN
Sbjct: 168 MPVRDLVSWNVMICCFSHVGLHNQALSMYKRM-GNEGVCGDSYTLVALLSSCAHVSALNM 226
Query: 349 GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAY 408
G +H++ + +V +ALI+MY+KCG L A +F+ +R+RD+++WN MI Y
Sbjct: 227 GVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNG--MRKRDVLTWNSMIIGY 284
Query: 409 AHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVR 468
HG+G EAI+ F KM G + N +T++ LL CSH GLV+EG+++F+ + +
Sbjct: 285 GVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPN 344
Query: 469 EDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 528
HY C+VDL GRAG+L+ + +I +W LL C +H N ++G++ KK++
Sbjct: 345 VKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLV 404
Query: 529 KIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGD 588
++E NAG Y L++++Y++ + A++R ++ L+ PG SW+E+G+ V FVV D
Sbjct: 405 QLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDD 464
Query: 589 KSHSQSELL 597
K H +S ++
Sbjct: 465 KMHPESAVI 473
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 39/249 (15%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
+ D + T+LV Y +E A ++F EMP R++ SWN MI ++ G +AL +++R
Sbjct: 139 LDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKR 198
Query: 165 MPERNVVSWN-TIIKALSECGRIEDAQWHFNQMR-------ERDVKSWTTMVDGLAINGR 216
M V + T++ LS C + R E V ++D A G
Sbjct: 199 MGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGS 258
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQN 276
+++A +F+ M R+V++WN MI GY + EA+ F +M +
Sbjct: 259 LENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV------------- 305
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
+ N IT+ ++ G GL +E ++ F + + L PN +
Sbjct: 306 --------------RPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHY--- 348
Query: 337 LGACSDLAG 345
G DL G
Sbjct: 349 -GCMVDLYG 356
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 157/387 (40%), Gaps = 50/387 (12%)
Query: 15 PK-LKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPE 73
PK L+ H + I +G+ ++TS +SA G ++ A K+FD MP
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSA-------------NGSVEIASKVFDEMPV 170
Query: 74 RDLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDVVTWTALVNGYVKLNQIEEA--- 127
RDL W MI + G+ +A ++ D T AL++ ++ +
Sbjct: 171 RDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVML 230
Query: 128 ERLFYEM-PERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRI 186
R+ ++ E V N +ID YA+ G E A+ +F M +R+V++WN++I G
Sbjct: 231 HRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHG 290
Query: 187 EDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVR-----NVVSWNV 237
+A F +M V+ ++ ++ G + G V + E F+ M + NV +
Sbjct: 291 VEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGC 350
Query: 238 MIKGYAKNRRLDEALEL-FERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
M+ Y + +L+ +LE+ + D W TL+ + +L E ++ Q
Sbjct: 351 MVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFN 410
Query: 297 W--TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
+MT +A KL H L+ G + + G Q+H+
Sbjct: 411 AGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPG-----------WSWIEIGDQVHK 459
Query: 355 LISKTAFQESTYVVSALINMYSKCGEL 381
+ + V+ YS+ GE+
Sbjct: 460 FVVDDKMHPESAVI------YSELGEV 480
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 261/472 (55%), Gaps = 25/472 (5%)
Query: 143 NTMIDGYARNGQTEKALDLFRRMP--ERNVVSWNTIIKALSECGRIEDAQWHFNQMRERD 200
N + YA +G+ A LF +P E++ V W T++ + S G + ++ F +MR +
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 201 VK-SWTTMVDGLAINGRVDD------ARELFDRMPVRNVVS-WNVMIKGYAKNRRLDEAL 252
V+ ++V + +++D + +M V V N ++ Y K + E
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 253 ELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
+FE + E+ + SW ++ ++ L R ++FHEMP++N + WT M+ GY+ G + E
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 313 ALKIFNKL--QADHALKPNTGTFVTVLGACSDLAGLNEGQQIH-------QLISKTAFQE 363
L++ ++ + H L N T ++L AC+ L G+ +H ++ + A +
Sbjct: 227 VLELLAEMVFRCGHGL--NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYD 284
Query: 364 STYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNK 423
V +AL++MY+KCG + + +F L+R+R++++WN + + A HG G+ I++F +
Sbjct: 285 DVMVGTALVDMYAKCGNIDSSMNVFR--LMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQ 342
Query: 424 MQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAG 483
M + +D+T+ +L+ACSH+G+V+EG + F L + ++ + DHYAC+VDL GRAG
Sbjct: 343 MIR-EVKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAG 400
Query: 484 RLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSN 543
++EA ++ + V + V G LL C+VHG +I + + ++++++ P N L+SN
Sbjct: 401 LIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSN 460
Query: 544 MYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
MY + G+ A +R ++ +G++K PG S + V ++V F GD+SH +++
Sbjct: 461 MYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHPRTK 512
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 167/353 (47%), Gaps = 31/353 (8%)
Query: 81 TMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
+++ Y CG++ E +++F+ + K VV+WT +++ VK +E +F+EMPERN
Sbjct: 151 ALMDMYGKCGLVSEVKRIFEELEE-KSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAV 209
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPER-----NVVSWNTIIKALSECGRIEDAQW-HFN 194
+W M+ GY G T + L+L M R N V+ +++ A ++ G + +W H
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVY 269
Query: 195 QMRER----------DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAK 244
+++ DV T +VD A G +D + +F M RNVV+WN + G A
Sbjct: 270 ALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAM 329
Query: 245 NRRLDEALELFERMPERDMP---SWNTLVTGFIQNGDLNRAEKLFHEMP----QKNVITW 297
+ + +++F +M P ++ +++ +G ++ + FH + + V +
Sbjct: 330 HGKGRMVIDMFPQMIREVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEPKVDHY 389
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
M+ + GL EEA L + + PN ++LG+CS + ++I + +
Sbjct: 390 ACMVDLLGRAGLIEEA----EILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELI 445
Query: 358 KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAH 410
+ + + Y + + NMY G IA + G LR+R + G+ + Y +
Sbjct: 446 QMSPGNTEYQI-LMSNMYVAEGRSDIADGL--RGSLRKRGIRKIPGLSSIYVN 495
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 172/397 (43%), Gaps = 27/397 (6%)
Query: 19 THPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMP--ERDL 76
H +F+ G ++TS N G + A+KLFD +P E+D
Sbjct: 17 AHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDN 76
Query: 77 HLWGTMINGYIMCGVIKEARKLFDGPDAMK---DVVTWTALVNGYVKLNQIEEAER---L 130
W T+++ + G++ + KLF + D V+ L KL + A++ +
Sbjct: 77 VDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGV 136
Query: 131 FYEMPE-RNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDA 189
+M +V+ N ++D Y + G + +F + E++VVSW ++ + + +E
Sbjct: 137 AVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERG 196
Query: 190 QWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-----NVVSWNVMIKGYAK 244
+ F++M ER+ +WT MV G G + EL M R N V+ M+ A+
Sbjct: 197 REVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQ 256
Query: 245 N-----------RRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKN 293
+ L + + + E D+ LV + + G+++ + +F M ++N
Sbjct: 257 SGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRN 316
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
V+TW A+ +G HG + +F ++ + +KP+ TF VL ACS ++EG +
Sbjct: 317 VVTWNALFSGLAMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEGWRCF 374
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDE 390
+ + + ++++ + G + A + E
Sbjct: 375 HSLRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMRE 411
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 139/296 (46%), Gaps = 33/296 (11%)
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAFQES--TYVVSALINMYSKCGELHIARRIFDEGLL 393
+L C+ + L G+++H +++ + +++ +Y+ +AL Y+ GE+ A+++FDE L
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 394 RQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH---AGLVE 450
++D + W ++++++ +G ++ LF +M+ + +DV+ V L C+ G +
Sbjct: 72 SEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQ 131
Query: 451 EGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
+G K+ S++V L+D+ G+ G + E I E L + S+ W +L
Sbjct: 132 QGHGVAVKMGVLTSVKV----CNALMDMYGKCGLVSEVKRIFEELE-EKSVVSWTVVLDT 186
Query: 511 CNVHGNADIGKLVAKKILKIEPE-NAGTYSLLSNMYASVGKWKEAANVRMKMKDK---GL 566
+ G+ V ++ PE NA ++++ Y G +E + +M + GL
Sbjct: 187 VVKWEGLERGREVFHEM----PERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGL 242
Query: 567 KKQPGCS---------------WVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTK 607
CS WV V + ++G+++ ++G L+D++ K
Sbjct: 243 NFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAK 298
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/608 (29%), Positives = 301/608 (49%), Gaps = 93/608 (15%)
Query: 76 LHLWGTMINGYIMCGVIKEARKL-FDGPDAMKDVVTWTALVNGYVKLNQIE--------- 125
L +WG N + VI R L FDG V+ +G+ ++ ++
Sbjct: 118 LRVWGFEPNTSTLVLVIHACRSLWFDGEKIHGYVIR-----SGFCGISSVQNSILCMYAD 172
Query: 126 ----EAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM-----PERNVVSWNTI 176
A +LF EM ER+V SW+ +I Y ++ + L LF+ M E + V+ ++
Sbjct: 173 SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 177 IKALSECGRIEDA----QWHFNQMRE----RDVKSWTTMVDGLAINGRVDDARELFDRMP 228
+KA C +ED H +R DV +++D + VD A +FD
Sbjct: 233 LKA---CTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETT 289
Query: 229 VRNVVSWNVMIKGYAKNRRLDEALELFERMP---------------------ERDMP--- 264
RN+VSWN ++ G+ N+R DEALE+F M E+ +P
Sbjct: 290 CRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKS 349
Query: 265 ---------------SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGL 309
+ ++L+ + ++ A + M K+V++ + M++G G
Sbjct: 350 IHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR 409
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL-ISKTAFQESTYVV 368
S+EA+ IF ++ PN T +++L ACS A L + H + I ++ V
Sbjct: 410 SDEAISIFCHMRD----TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVG 465
Query: 369 SALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELG 428
+++++ Y+KCG + +ARR FD+ + ++++ISW +I+AYA +G +A+ LF++M++ G
Sbjct: 466 TSIVDAYAKCGAIEMARRTFDQ--ITEKNIISWTVIISAYAINGLPDKALALFDEMKQKG 523
Query: 429 FQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR---SIQVREDHYACLVDLCGRAGRL 485
+ N VTY+ L+AC+H GLV++GL F +++ S+Q HY+C+VD+ RAG +
Sbjct: 524 YTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQ----HYSCIVDMLSRAGEI 579
Query: 486 KEAFNIIEGLGVDL--SLSVWGPLLAGC-NVHGNADIGKLVAKKILKIEPENAGTYSLLS 542
A +I+ L D+ S WG +L+GC N I V ++L++EP + Y L S
Sbjct: 580 DTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLAS 639
Query: 543 NMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDK-SHSQSELLGYLL 601
+ +A+ W++ A +R +K++ ++ G S V GN + F+ GDK S S SE L ++
Sbjct: 640 STFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSE-LNDVV 698
Query: 602 LDLHTKMK 609
LH MK
Sbjct: 699 QSLHRCMK 706
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 188/419 (44%), Gaps = 91/419 (21%)
Query: 111 WTALVNGYVKLNQ--IEEAERLFYEMPERNVR--SW----NTMIDGYARNGQTEKALDLF 162
W +V+GY ++ + ++ + + + + SW N++ D Y + G L F
Sbjct: 25 WREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWLFQGNSIADFYMKCGDLCSGLREF 84
Query: 163 RRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMV--------DG 210
M R+ VSWN I+ L + G E+ W F+++R E + + ++ DG
Sbjct: 85 DCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFDG 144
Query: 211 LAINGRVD------------------------DARELFDRMPVRNVVSWNVMIKGYAKNR 246
I+G V AR+LFD M R+V+SW+V+I+ Y +++
Sbjct: 145 EKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKLFDEMSERDVISWSVVIRSYVQSK 204
Query: 247 RLDEALELFERM-------PE----------------------------------RDMPS 265
L+LF+ M P+ D+
Sbjct: 205 EPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFV 264
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHA 325
N+L+ + + D++ A ++F E +N+++W +++ G+V + +EAL++F+ L A
Sbjct: 265 CNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFH-LMVQEA 323
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
++ + T V++L C + IH +I + ++ + +S+LI+ Y+ C + A
Sbjct: 324 VEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAG 383
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACS 444
+ D + +D++S + MI+ AH G EAI++F M++ N +T + LL ACS
Sbjct: 384 TVLDS--MTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRD---TPNAITVISLLNACS 437
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 142/327 (43%), Gaps = 74/327 (22%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEAR----------- 96
CN+ I + +D A ++FD R++ W +++ G++ EA
Sbjct: 265 CNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAV 324
Query: 97 --------------KLFDGPDAMKDV-------------VTWTALVNGYVKLNQIEEAER 129
K F+ P K + V ++L++ Y + +++A
Sbjct: 325 EVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGT 384
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER-NVVSWNTIIKALSECGRIED 188
+ M ++V S +TMI G A G++++A+ +F M + N ++ +++ A S +
Sbjct: 385 VLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRT 444
Query: 189 AQW-HFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
++W H +R D+ T++VD A G ++ AR FD++ +N++SW V+I YA
Sbjct: 445 SKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYA 504
Query: 244 KNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG 303
N D+AL LF+ M ++ G+ N +T+ A ++
Sbjct: 505 INGLPDKALALFDEMKQK----------GYTPNA-----------------VTYLAALSA 537
Query: 304 YVQHGLSEEALKIFNKL-QADHALKPN 329
GL ++ L IF + + DH KP+
Sbjct: 538 CNHGGLVKKGLMIFKSMVEEDH--KPS 562
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 124/247 (50%), Gaps = 12/247 (4%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
N++ +++ GDL + F M ++ ++W ++ G + +G EE L F+KL+
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRV-WGF 123
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
+PNT T V V+ AC L +G++IH + ++ F + V ++++ MY+ L AR+
Sbjct: 124 EPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARK 180
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM-QELGFQANDVTYVELLTACSH 445
+FDE + +RD+ISW+ +I +Y + LF +M E + + VT +L AC+
Sbjct: 181 LFDE--MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTV 238
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYAC--LVDLCGRAGRLKEAFNIIEGLGVDLSLSV 503
++ G ++ R + D + C L+D+ + + AF + + +S
Sbjct: 239 MEDIDVGRSVHGFSIR-RGFDL-ADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVS- 295
Query: 504 WGPLLAG 510
W +LAG
Sbjct: 296 WNSILAG 302
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 114/279 (40%), Gaps = 61/279 (21%)
Query: 15 PKLKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPER 74
P H I GY + + SSL A C+ +DDA + D M +
Sbjct: 346 PCKSIHGVIIRRGY---ESNEVALSSLIDAYTSCSL----------VDDAGTVLDSMTYK 392
Query: 75 DLHLWGTMINGYIMCGVIKEARKLF----DGPD--------------------------- 103
D+ TMI+G G EA +F D P+
Sbjct: 393 DVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIA 452
Query: 104 -----AMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKA 158
A+ D+ T++V+ Y K IE A R F ++ E+N+ SW +I YA NG +KA
Sbjct: 453 IRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKA 512
Query: 159 LDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERD----VKSWTTMVDG 210
L LF M ++ N V++ + A + G ++ F M E D ++ ++ +VD
Sbjct: 513 LALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDM 572
Query: 211 LAINGRVDDARELFDRMP---VRNVVSWNVMIKGYAKNR 246
L+ G +D A EL +P +W ++ G +NR
Sbjct: 573 LSRAGEIDTAVELIKNLPEDVKAGASAWGAILSG-CRNR 610
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 148/524 (28%), Positives = 266/524 (50%), Gaps = 61/524 (11%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
D V +L++ Y K ++ ++F EM R+ S+ ++I+ ++G +A+ L + M
Sbjct: 81 DTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMY 140
Query: 167 ERNVVSWNTIIKAL----------SECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGR 216
+ + ++ +L S+ R+ A ++ + V T +VD + +
Sbjct: 141 FYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD---MYLK 197
Query: 217 VDD---ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PSWNTLV-- 270
DD A +FD+M V+N VSW MI G N+ + ++LF M ++ P+ TL+
Sbjct: 198 FDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSV 257
Query: 271 -------------------------------------TGFIQNGDLNRAEKLFHEMPQKN 293
T + + G+++ + LF ++
Sbjct: 258 LPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRD 317
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
V+ W++M++GY + G E + + N+++ + ++ N+ T + ++ AC++ L+ +H
Sbjct: 318 VVMWSSMISGYAETGDCSEVMNLLNQMRKE-GIEANSVTLLAIVSACTNSTLLSFASTVH 376
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGY 413
I K F + +ALI+MY+KCG L AR +F E L ++DL+SW+ MI AY HG+
Sbjct: 377 SQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE--LTEKDLVSWSSMINAYGLHGH 434
Query: 414 GKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA 473
G EA+ +F M + G + +D+ ++ +L+AC+HAGLVEE F + K + V +HYA
Sbjct: 435 GSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH-MPVTLEHYA 493
Query: 474 CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADI-GKLVAKKILKIEP 532
C ++L GR G++ +AF + + + S +W LL+ C HG D+ GK++A +++K EP
Sbjct: 494 CYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEP 553
Query: 533 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVE 576
+N Y LLS ++ G + A VR M+ + L K G S +E
Sbjct: 554 DNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 135/290 (46%), Gaps = 51/290 (17%)
Query: 56 CQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DGPDA------ 104
C+ G + +R LF+ RD+ +W +MI+GY G E L +G +A
Sbjct: 298 CRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLL 357
Query: 105 ---------------------------MKDVVTWTALVNGYVKLNQIEEAERLFYEMPER 137
M ++ AL++ Y K + A +FYE+ E+
Sbjct: 358 AIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEK 417
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKALSECGRIEDAQWHF 193
++ SW++MI+ Y +G +AL++F+ M E + +++ I+ A + G +E+AQ F
Sbjct: 418 DLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF 477
Query: 194 NQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMIKGYAKNRRL 248
Q + ++ + ++ L G++DDA E+ MP++ + W+ ++ + RL
Sbjct: 478 TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRL 537
Query: 249 DEALELF--ERM-PERDMPSWNTLVTGF-IQNGDLNRAEKLFHEMPQKNV 294
D A ++ E M E D P+ L++ ++G+ + AE++ M ++ +
Sbjct: 538 DVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKL 587
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 9/224 (4%)
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPN--TGTFVTVLGACS-DLAGLNEGQQIHQLIS 357
+ G V +EAL+++ KL+ H+L N T +V+ AC+ G Q+H L
Sbjct: 17 LKGLVSDQFYDEALRLY-KLKI-HSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCL 74
Query: 358 KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEA 417
K T V ++LI+MY+K + R++FDE L RD +S+ +I + G EA
Sbjct: 75 KAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEML--HRDTVSYCSIINSCCQDGLLYEA 132
Query: 418 INLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL-LKNRSIQVREDHYACLV 476
+ L +M GF LL C+ G + + F L L + +Q LV
Sbjct: 133 MKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALV 192
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIG 520
D+ + AF++ + + V +S W +++GC + N ++G
Sbjct: 193 DMYLKFDDHAAAFHVFDQMEVKNEVS-WTAMISGCVANQNYEMG 235
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 33 TMSTSTSSLHSAMKDC---------NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMI 83
T+ + S++HS + C N I + G + AR++F + E+DL W +MI
Sbjct: 367 TLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMI 426
Query: 84 NGYIMCGVIKEARKLFDG---PDAMKDVVTWTALVNGYVKLNQIEEAERLF-----YEMP 135
N Y + G EA ++F G D + + A+++ +EEA+ +F Y MP
Sbjct: 427 NAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYHMP 486
Query: 136 ERNVRSWNTMIDGYARNGQTEKALDLFRRMPER-NVVSWNTIIKALSECGRIEDA 189
+ + I+ R G+ + A ++ MP + + W++++ A GR++ A
Sbjct: 487 -VTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVA 540
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 114/331 (34%), Positives = 207/331 (62%), Gaps = 5/331 (1%)
Query: 282 AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQ--ADHALKPNTGTFVTVLGA 339
A K+F E+P+++ ++W + + Y+++ + + L +F+K++ D +KP+ T + L A
Sbjct: 167 ACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQA 226
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLI 399
C++L L+ G+Q+H I + + + + L++MYS+CG + A ++F +R+R+++
Sbjct: 227 CANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYG--MRERNVV 284
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
SW +I+ A +G+GKEAI FN+M + G + T LL+ACSH+GLV EG+ +FD++
Sbjct: 285 SWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRM 344
Query: 460 LKNR-SIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD 518
I+ HY C+VDL GRA L +A+++I+ + + ++W LL C VHG+ +
Sbjct: 345 RSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVE 404
Query: 519 IGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVG 578
+G+ V +++++ E AG Y LL N Y++VGKW++ +R MK+K + +PGCS +E+
Sbjct: 405 LGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQ 464
Query: 579 NTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
TV F+V D SH + E + +L +++ ++K
Sbjct: 465 GTVHEFIVDDVSHPRKEEIYKMLAEINQQLK 495
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 134/298 (44%), Gaps = 10/298 (3%)
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
D+N + ++F + + M+ + E ++F L+ + +L N + L
Sbjct: 61 DINYSCRVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFAL 120
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRD 397
C L G QIH I F + +++ L+++YS C A ++FDE + +RD
Sbjct: 121 KCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDE--IPKRD 178
Query: 398 LISWNGMIAAYAHHGYGKEAINLFNKMQ---ELGFQANDVTYVELLTACSHAGLVEEGLQ 454
+SWN + + Y + ++ + LF+KM+ + + + VT + L AC++ G ++ G Q
Sbjct: 179 TVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQ 238
Query: 455 YFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVH 514
D + +N + + LV + R G + +A+ + G+ + ++ W L++G ++
Sbjct: 239 VHDFIDEN-GLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALISGLAMN 296
Query: 515 GNADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQP 570
G ++LK I PE LLS S G E +M+ K +P
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHS-GLVAEGMMFFDRMRSGEFKIKP 353
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 160/399 (40%), Gaps = 94/399 (23%)
Query: 41 LHSAMKDCNTSISRL------CQEGRIDDARKLFDRMPERDLH----LWGTMINGYIMCG 90
L+ + CNT I C+ R+ + + +P L L + +G ++ G
Sbjct: 73 LNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGG 132
Query: 91 VIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYA 150
+ + DG + D + T L++ Y +A ++F E+P+R+ SWN + Y
Sbjct: 133 LQIHGKIFSDG--FLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 151 RNGQTEKALDLFRRMP-------------------------------------ERNVVSW 173
RN +T L LF +M + N +S
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 174 -----NTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM- 227
NT++ S CG ++ A F MRER+V SWT ++ GLA+NG +A E F+ M
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 228 -----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRA 282
P ++ ++ + + + E + F+RM ++G+
Sbjct: 311 KFGISPEEQTLTG--LLSACSHSGLVAEGMMFFDRM----------------RSGEFKIK 352
Query: 283 EKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
L H + ++ + L ++A + ++ +KP++ + T+LGAC
Sbjct: 353 PNLHH---------YGCVVDLLGRARLLDKAYSLIKSME----MKPDSTIWRTLLGACRV 399
Query: 343 LAGLNEGQQ-IHQLISKTAFQESTYVVSALINMYSKCGE 380
+ G++ I LI A + YV+ L+N YS G+
Sbjct: 400 HGDVELGERVISHLIELKAEEAGDYVL--LLNTYSTVGK 436
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/544 (29%), Positives = 256/544 (47%), Gaps = 61/544 (11%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
++V+ L+N Y K I A ++F MPERNV SW +I GY + G ++ LF M
Sbjct: 94 QNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
Query: 166 PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDD------ 219
+ T+ L+ C Q H ++ S +++ GR D
Sbjct: 154 LSHCFPNEFTLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYE 213
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQ 275
A +F+ + +N+V+WN MI + +A+ +F RM D + + + +
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYK 273
Query: 276 NGDLNRAE------------------------------------------KLFHEMPQ-K 292
+ DL E KLF EM +
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR 333
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
+++ W ++T + + E A+ +F +L+ + L P+ TF +VL AC+ L I
Sbjct: 334 DIVAWNGIITAFAVYD-PERAIHLFGQLRQE-KLSPDWYTFSSVLKACAGLVTARHALSI 391
Query: 353 HQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
H + K F T + ++LI+ Y+KCG L + R+FD+ + RD++SWN M+ AY+ HG
Sbjct: 392 HAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDD--MDSRDVVSWNSMLKAYSLHG 449
Query: 413 YGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
+ +F KM + T++ LL+ACSHAG VEEGL+ F + + + +HY
Sbjct: 450 QVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHY 506
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK-IE 531
AC++D+ RA R EA +I+ + +D VW LL C HGN +GKL A K+ + +E
Sbjct: 507 ACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVE 566
Query: 532 PENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSH 591
P N+ +Y +SN+Y + G + EA +M+ ++K+P SW E+GN V F G +
Sbjct: 567 PTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHR 626
Query: 592 SQSE 595
E
Sbjct: 627 PDKE 630
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 126/245 (51%), Gaps = 22/245 (8%)
Query: 211 LAINGRVDDARELFDRMPV--RNVVSWNVMIKGYAKNRRLDEALELFERMPERDMP-SWN 267
L +G + A LF PV ++ ++ + + A+ R L + + L M S N
Sbjct: 36 LVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQN 95
Query: 268 TLVTGFIQN-----GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
++ F+ N G++ A ++F MP++NV++WTA++TGYVQ G +E +F+ + +
Sbjct: 96 VILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLS 155
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC---G 379
H PN T +VL +C G+Q+H L K S YV +A+I+MY +C
Sbjct: 156 -HCF-PNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGA 209
Query: 380 ELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
+ A +F+ ++ ++L++WN MIAA+ GK+AI +F +M G + T L
Sbjct: 210 AAYEAWTVFEA--IKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT---L 264
Query: 440 LTACS 444
L CS
Sbjct: 265 LNICS 269
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 116/260 (44%), Gaps = 44/260 (16%)
Query: 72 PERDLHLWGTM------INGYIMCGVIKEARKLFDGPDAMK------------DVVTWTA 113
PER +HL+G + + Y V+K L A+ D V +
Sbjct: 350 PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNS 409
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP-ERNVVS 172
L++ Y K ++ R+F +M R+V SWN+M+ Y+ +GQ + L +F++M + +
Sbjct: 410 LIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSAT 469
Query: 173 WNTIIKALSECGRIEDAQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRM 227
+ ++ A S GR+E+ F M E+ + + ++D L+ R +A E+ +M
Sbjct: 470 FIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQM 529
Query: 228 PVR-NVVSWNVMIKGYAK--NRRL-----DEALELFERMPERDMPSWNTLVTGFIQNGDL 279
P+ + V W ++ K N RL D+ EL E P M +IQ ++
Sbjct: 530 PMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVE--PTNSM--------SYIQMSNI 579
Query: 280 NRAEKLFHE--MPQKNVITW 297
AE F+E + K + TW
Sbjct: 580 YNAEGSFNEANLSIKEMETW 599
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/429 (32%), Positives = 229/429 (53%), Gaps = 42/429 (9%)
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-------PS------- 265
AR LF+ M ++V +N M +GY++ E LF + E + PS
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 266 -------------------------WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAM 300
TL+ + + D++ A +F + + V+ + AM
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
+TGY + EAL +F ++Q + LKPN T ++VL +C+ L L+ G+ IH+ K +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKY-LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 361 FQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINL 420
F + V +ALI+M++KCG L A IF++ +R +D +W+ MI AYA+HG ++++ +
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEK--MRYKDTQAWSAMIVAYANHGKAEKSMLM 318
Query: 421 FNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCG 480
F +M+ Q +++T++ LL ACSH G VEEG +YF +++ I HY +VDL
Sbjct: 319 FERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLS 378
Query: 481 RAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSL 540
RAG L++A+ I+ L + + +W LLA C+ H N D+ + V+++I +++ + G Y +
Sbjct: 379 RAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVI 438
Query: 541 LSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYL 600
LSN+YA KW+ ++R MKD+ K PGCS +EV N V F GD S + L
Sbjct: 439 LSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRA 498
Query: 601 LLDLHTKMK 609
L ++ ++K
Sbjct: 499 LDEMVKELK 507
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 141/290 (48%), Gaps = 8/290 (2%)
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
++ A LF M + +++ + +M GY + E +F ++ D L P+ TF ++
Sbjct: 77 SSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSL 135
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR 396
L AC+ L EG+Q+H L K ++ YV LINMY++C ++ AR +FD + +
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDR--IVEP 193
Query: 397 DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYF 456
++ +N MI YA EA++LF +MQ + N++T + +L++C+ G ++ G ++
Sbjct: 194 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWI 252
Query: 457 DKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN 516
K K S L+D+ + G L +A +I E + W ++ HG
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVAYANHGK 311
Query: 517 ADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDK 564
A+ L+ +++ ++P+ LL N + G+ +E +M K
Sbjct: 312 AEKSMLMFERMRSENVQPDEITFLGLL-NACSHTGRVEEGRKYFSQMVSK 360
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 48/263 (18%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD------- 100
C T I+ + +D AR +FDR+ E + + MI GY EA LF
Sbjct: 167 CPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYL 226
Query: 101 GPDAMK--------------DVVTW-----------------TALVNGYVKLNQIEEAER 129
P+ + D+ W TAL++ + K +++A
Sbjct: 227 KPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVS 286
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGR 185
+F +M ++ ++W+ MI YA +G+ EK++ +F RM NV +++ ++ A S GR
Sbjct: 287 IFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGR 346
Query: 186 IEDAQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNV-VSWNVMI 239
+E+ + +F+QM + +K + +MVD L+ G ++DA E D++P+ + W +++
Sbjct: 347 VEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILL 406
Query: 240 KGYAKNRRLDEALELFERMPERD 262
+ + LD A ++ ER+ E D
Sbjct: 407 AACSSHNNLDLAEKVSERIFELD 429
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 153/354 (43%), Gaps = 59/354 (16%)
Query: 58 EGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DG--PD------- 103
E + AR LF+ M E D+ ++ +M GY E LF DG PD
Sbjct: 76 ESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSL 135
Query: 104 -------------------AMK-----DVVTWTALVNGYVKLNQIEEAERLFYEMPERNV 139
+MK +V L+N Y + ++ A +F + E V
Sbjct: 136 LKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCV 195
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSEC---GRIEDAQWHFNQ 195
+N MI GYAR + +AL LFR M + + T++ LS C G ++ +W
Sbjct: 196 VCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKY 255
Query: 196 MRERD----VKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEA 251
++ VK T ++D A G +DDA +F++M ++ +W+ MI YA + + +++
Sbjct: 256 AKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKS 315
Query: 252 LELFERM----PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK-----NVITWTAMMT 302
+ +FERM + D ++ L+ G + K F +M K ++ + +M+
Sbjct: 316 MLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVD 375
Query: 303 GYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
+ G E+A + +KL + P + +L ACS L+ +++ + I
Sbjct: 376 LLSRAGNLEDAYEFIDKL----PISPTPMLWRILLAACSSHNNLDLAEKVSERI 425
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/420 (33%), Positives = 219/420 (52%), Gaps = 42/420 (10%)
Query: 215 GRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER--DMPSW------ 266
G + DAR LFD +P RN+ S+ +I G+ EA ELF+ M E D +
Sbjct: 172 GMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVML 231
Query: 267 --------------------------NTLVT-GFI----QNGDLNRAEKLFHEMPQKNVI 295
NT V+ G I + GD+ A F MP+K +
Sbjct: 232 RASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTV 291
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
W ++ GY HG SEEAL + ++ D + + T ++ + LA L +Q H
Sbjct: 292 AWNNVIAGYALHGYSEEALCLLYDMR-DSGVSIDQFTLSIMIRISTKLAKLELTKQAHAS 350
Query: 356 ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK 415
+ + F+ +AL++ YSK G + AR +FD+ L ++++ISWN ++ YA+HG G
Sbjct: 351 LIRNGFESEIVANTALVDFYSKWGRVDTARYVFDK--LPRKNIISWNALMGGYANHGRGT 408
Query: 416 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACL 475
+A+ LF KM N VT++ +L+AC+++GL E+G + F + + I+ R HYAC+
Sbjct: 409 DAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACM 468
Query: 476 VDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENA 535
++L GR G L EA I + ++++W LL C + N ++G++VA+K+ + PE
Sbjct: 469 IELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKL 528
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
G Y ++ NMY S+GK EAA V ++ KGL P C+WVEVG+ F+ GD+ S +E
Sbjct: 529 GNYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNE 588
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 153/325 (47%), Gaps = 73/325 (22%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGP-DAMKDVVTWT----- 112
G I DAR+LFD +PER+L+ + ++I+G++ G EA +LF + + D T T
Sbjct: 172 GMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVML 231
Query: 113 --------------------------------ALVNGYVKLNQIEEAERLFYEMPERNVR 140
L++ Y K IE+A F MPE+
Sbjct: 232 RASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTV 291
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIE-DAQWHFNQ 195
+WN +I GYA +G +E+AL L M + V + + +I+ ++ ++E Q H +
Sbjct: 292 AWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASL 351
Query: 196 MR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEAL 252
+R E ++ + T +VD + GRVD AR +FD++P +N++SWN ++ GYA + R +A+
Sbjct: 352 IRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAV 411
Query: 253 ELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
+LFE+M ++ N +T+ A+++ GLSE+
Sbjct: 412 KLFEKMIAANVAP---------------------------NHVTFLAVLSACAYSGLSEQ 444
Query: 313 ALKIFNKLQADHALKPNTGTFVTVL 337
+IF + H +KP + ++
Sbjct: 445 GWEIFLSMSEVHGIKPRAMHYACMI 469
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 175/361 (48%), Gaps = 42/361 (11%)
Query: 206 TMVDGLAINGRVDDARELFDRMPVR-----NVVSWNVMIKGYAKNRRLDEALELFERM-- 258
+ ++ L + R +A ELF+ + +R V +++ +++ + + + ++ M
Sbjct: 92 SQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMS 151
Query: 259 ----PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
PE+ M N ++ ++ G + A +LF E+P++N+ ++ ++++G+V G EA
Sbjct: 152 NGFEPEQYM--MNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAF 209
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
++F K+ + T TF +L A + L + G+Q+H K ++T+V LI+M
Sbjct: 210 ELF-KMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDM 268
Query: 375 YSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
YSKCG++ AR F+ + ++ ++WN +IA YA HGY +EA+ L M++ G +
Sbjct: 269 YSKCGDIEDARCAFE--CMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQF 326
Query: 435 TYVEL-----------LTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAG 483
T + LT +HA L+ G + +++ N + LVD + G
Sbjct: 327 TLSIMIRISTKLAKLELTKQAHASLIRNGFE--SEIVANTA----------LVDFYSKWG 374
Query: 484 RLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHG-NADIGKLVAKKI-LKIEPENAGTYSLL 541
R+ A + + L +S W L+ G HG D KL K I + P + ++L
Sbjct: 375 RVDTARYVFDKLPRKNIIS-WNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVL 433
Query: 542 S 542
S
Sbjct: 434 S 434
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 132/278 (47%), Gaps = 49/278 (17%)
Query: 118 YVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER--------- 168
+VK I +A RLF E+PERN+ S+ ++I G+ G +A +LF+ M E
Sbjct: 168 HVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTF 227
Query: 169 ------------------------------NVVSWNTIIKALSECGRIEDAQWHFNQMRE 198
N +I S+CG IEDA+ F M E
Sbjct: 228 AVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPE 287
Query: 199 RDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALE- 253
+ +W ++ G A++G ++A L M V + ++MI+ K +L+ +
Sbjct: 288 KTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQA 347
Query: 254 ---LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLS 310
L E ++ + LV + + G ++ A +F ++P+KN+I+W A+M GY HG
Sbjct: 348 HASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRG 407
Query: 311 EEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
+A+K+F K+ A + + PN TF+ VL AC+ +GL+E
Sbjct: 408 TDAVKLFEKMIAAN-VAPNHVTFLAVLSACA-YSGLSE 443
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 150/367 (40%), Gaps = 82/367 (22%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL-FDGPDA------------- 104
G I+DAR F+ MPE+ W +I GY + G +EA L +D D+
Sbjct: 273 GDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMI 332
Query: 105 ------------------------MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR 140
++V TALV+ Y K +++ A +F ++P +N+
Sbjct: 333 RISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNII 392
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN-TIIKALSECGRIEDAQWHFNQMRER 199
SWN ++ GYA +G+ A+ LF +M NV + T + LS C ++ + E+
Sbjct: 393 SWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACA--------YSGLSEQ 444
Query: 200 DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP 259
+ + +M + I R + + MI+ ++ LDEA+ R P
Sbjct: 445 GWEIFLSMSEVHGIKPR---------------AMHYACMIELLGRDGLLDEAIAFIRRAP 489
Query: 260 ERDMPS-WNTLVTG--FIQNGDLNR--AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
+ + W L+ +N +L R AEKL+ P+K + + M Y G + EA
Sbjct: 490 LKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEK-LGNYVVMYNMYNSMGKTAEAA 548
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
+ L++ ++++ AC+ + G Q H +S F V I
Sbjct: 549 GVLETLESKG---------LSMMPACT---WVEVGDQTHSFLSGDRFDSYNETVKRQI-- 594
Query: 375 YSKCGEL 381
Y K EL
Sbjct: 595 YQKVDEL 601
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 134/435 (30%), Positives = 233/435 (53%), Gaps = 21/435 (4%)
Query: 158 ALDLFRRMPERNVVSWNTIIK--ALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGL 211
A +FR + + +NTII+ L E + ++ F +MR R D ++ +
Sbjct: 67 ATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRF-FVEMRRRSVPPDFHTFPFVFKAC 125
Query: 212 AI--NGRVDDARELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPS 265
A NG + + L + + ++ + N +I+ Y+ +D AL+LF+ P+RD+ +
Sbjct: 126 AAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVT 185
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHA 325
+N L+ G ++ ++ RA +LF MP +++++W ++++GY Q EA+K+F+++ A
Sbjct: 186 YNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVA-LG 244
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
LKP+ V+ L AC+ +G+ IH + +++ + L++ Y+KCG + A
Sbjct: 245 LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAM 304
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
IF+ L + L +WN MI A HG G+ ++ F KM G + + VT++ +L CSH
Sbjct: 305 EIFE--LCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSH 362
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVD----LSL 501
+GLV+E FD++ + HY C+ DL GRAG ++EA +IE + D L
Sbjct: 363 SGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKL 422
Query: 502 SVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKM 561
W LL GC +HGN +I + A ++ + PE+ G Y ++ MYA+ +W+E VR +
Sbjct: 423 LAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREII 482
Query: 562 -KDKGLKKQPGCSWV 575
+DK +KK G S V
Sbjct: 483 DRDKKVKKNVGFSKV 497
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 157/342 (45%), Gaps = 63/342 (18%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
NT I ID A +LFD P+RD+ + +I+G + I AR+LFD ++D+
Sbjct: 156 NTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSM-PLRDL 214
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT------------------------ 144
V+W +L++GY ++N EA +LF EM ++ N
Sbjct: 215 VSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDY 274
Query: 145 ---------------MIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDA 189
++D YA+ G + A+++F ++ + +WN +I L+ G E
Sbjct: 275 TKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELT 334
Query: 190 QWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGY--- 242
+F +M +K ++ +++ G + +G VD+AR LFD+M R++ N +K Y
Sbjct: 335 VDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQM--RSLYDVNREMKHYGCM 392
Query: 243 ----AKNRRLDEALELFERMPE-----RDMPSWNTLVTGFIQNGDLNRAEKLFHEM---- 289
+ ++EA E+ E+MP+ + +W+ L+ G +G++ AEK + +
Sbjct: 393 ADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALS 452
Query: 290 PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
P+ + + M+ Y EE +K+ + D +K N G
Sbjct: 453 PEDGGV-YKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVG 493
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 117/230 (50%), Gaps = 12/230 (5%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
+ D+ T L+ Y + I+ A +LF E P+R+V ++N +IDG + + +A +LF
Sbjct: 149 LSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDS 208
Query: 165 MPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDA 220
MP R++VSWN++I ++ +A F++M +K + + + A +G
Sbjct: 209 MPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKG 268
Query: 221 RELFDRMPVRNVVSWNVMIKG----YAKNRRLDEALELFERMPERDMPSWNTLVTGFIQN 276
+ + D + + + + G YAK +D A+E+FE ++ + +WN ++TG +
Sbjct: 269 KAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMH 328
Query: 277 GDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQA 322
G+ F +M + +T+ +++ G GL +EA +F+++++
Sbjct: 329 GNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRS 378
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 203/343 (59%), Gaps = 5/343 (1%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
N ++ ++ G+ A+K+ +NVITW M+ GYV++ EEALK + + +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
KPN +F + L AC+ L L+ + +H L+ + + + + SAL+++Y+KCG++ +R
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHA 446
+F +++ D+ WN MI +A HG EAI +F++M+ + +T++ LLT CSH
Sbjct: 222 VFYS--VKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHC 279
Query: 447 GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGP 506
GL+EEG +YF + + SIQ + +HY +VDL GRAGR+KEA+ +IE + ++ + +W
Sbjct: 280 GLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRS 339
Query: 507 LLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
LL+ + N ++G++ + + K + +G Y LLSN+Y+S KW+ A VR M +G+
Sbjct: 340 LLSSSRTYKNPELGEIAIQNLSKAK---SGDYVLLSNIYSSTKKWESAQKVRELMSKEGI 396
Query: 567 KKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
+K G SW+E G + F GD SH +++ + +L L K K
Sbjct: 397 RKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTK 439
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 49/249 (19%)
Query: 40 SLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF 99
SL + + N I L + G A+K+ ++++ W MI GY+ +EA K
Sbjct: 93 SLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKAL 152
Query: 100 DGPDAMKDV---------------------------------------VTWTALVNGYVK 120
+ D+ + +ALV+ Y K
Sbjct: 153 KNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAK 212
Query: 121 LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTI 176
I + +FY + +V WN MI G+A +G +A+ +F M +V +++ +
Sbjct: 213 CGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGL 272
Query: 177 IKALSECGRIEDAQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVR- 230
+ S CG +E+ + +F M R ++ + MVD L GRV +A EL + MP+
Sbjct: 273 LTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP 332
Query: 231 NVVSWNVMI 239
+VV W ++
Sbjct: 333 DVVIWRSLL 341
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 153/343 (44%), Gaps = 41/343 (11%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSW 173
++ +K+ + A+++ ++NV +WN MI GY RN Q E+AL + M +
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 174 N--TIIKALSECGRIED---AQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELF 224
N + +L+ C R+ D A+W + M + ++ + +VD A G + +RE+F
Sbjct: 164 NKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVF 223
Query: 225 DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLN 280
+ +V WN MI G+A + EA+ +F M D ++ L+T G L
Sbjct: 224 YSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLE 283
Query: 281 RAEKLFHEMPQKNVIT-----WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVT 335
++ F M ++ I + AM+ + G +EA ++ + ++P+ + +
Sbjct: 284 EGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESM----PIEPDVVIWRS 339
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ 395
+L + G+ Q +SK + YV+ L N+YS + A+++
Sbjct: 340 LLSSSRTYKNPELGEIAIQNLSKA--KSGDYVL--LSNIYSSTKKWESAQKV-------- 387
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVE 438
R+L+S G+ A GK + + F+A D +++E
Sbjct: 388 RELMSKEGIRKA-----KGKSWLEFGGMIHR--FKAGDTSHIE 423
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 118/281 (41%), Gaps = 30/281 (10%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEM-----PERNVRSWNTMIDGYARNGQTEKALD 160
++V+TW ++ GYV+ Q EEA + M + N S+ + + AR G A
Sbjct: 127 QNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKW 186
Query: 161 LFRRM----PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGR 216
+ M E N + + ++ ++CG I ++ F ++ DV W M+ G A +G
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRR----LDEALELFERMPER-----DMPSWN 267
+A +F M +V ++ G L+E E F M R + +
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYG 306
Query: 268 TLVTGFIQNGDLNRAEKLFHEMP-QKNVITWTAMMTG---YVQHGLSEEALKIFNKLQAD 323
+V + G + A +L MP + +V+ W ++++ Y L E A++ +
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLS----- 361
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQES 364
K +G +V + S Q++ +L+SK +++
Sbjct: 362 ---KAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/543 (28%), Positives = 276/543 (50%), Gaps = 42/543 (7%)
Query: 60 RIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGP----DAMKDVVTWTAL- 114
++ DA K+ D MPER + ++G + G ++A ++F M V + L
Sbjct: 81 QVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLG 140
Query: 115 ----VNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV 170
+ G ++L+ + A + +EM V +++ Y+R G+ A +F ++P ++V
Sbjct: 141 GCGDIEGGMQLHCL--AMKSGFEM---EVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSV 195
Query: 171 VSWNTIIKALSECGRIEDAQWHFNQMRE------RDVK---------SWTTMVDGLAING 215
V++N I L E G + FN MR+ DV S + G ++G
Sbjct: 196 VTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHG 255
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE-RDMPSWNTLVTGFI 274
V F+ M +I Y+K R A +F + + R++ SWN++++G +
Sbjct: 256 LVMKKEFQFETM------VGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMM 309
Query: 275 QNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNT 330
NG A +LF ++ + + TW ++++G+ Q G EA K F ++ + + P+
Sbjct: 310 INGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLS-VVMVPSL 368
Query: 331 GTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDE 390
++L ACSD+ L G++IH + K A + +V+++LI+MY KCG ARRIFD
Sbjct: 369 KCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDR 428
Query: 391 GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVE 450
+ +D + WN MI+ Y HG + AI +F ++E + + T+ +L+ACSH G VE
Sbjct: 429 FEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVE 488
Query: 451 EGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
+G Q F + + + +H C++DL GR+GRL+EA +I+ + S LL
Sbjct: 489 KGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGS 547
Query: 511 CNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQP 570
C H + +G+ A K+ ++EPEN + +LS++YA++ +W++ ++R + K L K P
Sbjct: 548 CRQHLDPVLGEEAAMKLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLP 607
Query: 571 GCS 573
G S
Sbjct: 608 GLS 610
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 98/206 (47%), Gaps = 36/206 (17%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDL---------------HLWGTMINGYIMCG-VI 92
N+ IS Q G++ +A K F+RM + +W T+ NG + G VI
Sbjct: 337 NSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIW-TLKNGKEIHGHVI 395
Query: 93 KEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLF--YEMPERNVRSWNTMIDGYA 150
K A A +D+ T+L++ Y+K A R+F +E ++ WN MI GY
Sbjct: 396 KAA--------AERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYG 447
Query: 151 RNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMRER-----DV 201
++G+ E A+++F + E V ++ ++ A S CG +E F M+E
Sbjct: 448 KHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPST 507
Query: 202 KSWTTMVDGLAINGRVDDARELFDRM 227
+ M+D L +GR+ +A+E+ D+M
Sbjct: 508 EHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
PN TF +L +C+ L + +G+ +H + KT F + +AL++MY K ++ A ++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 388 FDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAG 447
DE + +R + S N ++ +G+ ++A +F + G N VT +L C G
Sbjct: 89 LDE--MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---G 143
Query: 448 LVEEGLQ 454
+E G+Q
Sbjct: 144 DIEGGMQ 150
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 138/439 (31%), Positives = 228/439 (51%), Gaps = 47/439 (10%)
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE---------------- 260
++ AR+LFD M NVVSW +I GY + AL +F++M E
Sbjct: 80 INTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 261 ------------------------RDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ--KNV 294
R++ ++LV + + D+ A ++F M +NV
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQAD-HALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
++WT+M+T Y Q+ EA+++F A + + N +V+ ACS L L G+ H
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAH 259
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGY 413
L+++ ++ +T V ++L++MY+KCG L A +IF +R +IS+ MI A A HG
Sbjct: 260 GLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLR--IRCHSVISYTSMIMAKAKHGL 317
Query: 414 GKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA 473
G+ A+ LF++M N VT + +L ACSH+GLV EGL+Y + + + HY
Sbjct: 318 GEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYT 377
Query: 474 CLVDLCGRAGRLKEAFNIIEGL--GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIE 531
C+VD+ GR GR+ EA+ + + + G + +WG LL+ +HG +I +K++++
Sbjct: 378 CVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSN 437
Query: 532 PENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSH 591
+ Y LSN YA G W+++ ++R++MK G K+ CSW+E ++V VF GD S
Sbjct: 438 QQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSC 497
Query: 592 SQSELLGYLLLDLHTKMKK 610
+S + L DL +MK+
Sbjct: 498 DESGEIERFLKDLEKRMKE 516
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 2/193 (1%)
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
D + N LV +++ ++N A KLF EM + NV++WT++++GY G + AL +F K+
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
D + PN TF +V ACS LA G+ IH + + + + V S+L++MY KC ++
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDV 182
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE--LGFQANDVTYVEL 439
ARR+FD + R+++SW MI AYA + G EAI LF +AN +
Sbjct: 183 ETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASV 242
Query: 440 LTACSHAGLVEEG 452
++ACS G ++ G
Sbjct: 243 ISACSSLGRLQWG 255
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/305 (31%), Positives = 148/305 (48%), Gaps = 55/305 (18%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
D T LV YVKL +I A +LF EM E NV SW ++I GY G+ + AL +F++M
Sbjct: 63 DTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMH 122
Query: 167 ER-----NVVSWNTIIKAL-----SECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGR 216
E N ++ ++ KA S G+ A+ + +R R++ +++VD
Sbjct: 123 EDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLR-RNIVVSSSLVDMYGKCND 181
Query: 217 VDDARELFDRMP--VRNVVSWNVMIKGYAKNRRLDEALELF---------ERMPERDMPS 265
V+ AR +FD M RNVVSW MI YA+N R EA+ELF +R + + S
Sbjct: 182 VETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLAS 241
Query: 266 ------------WNTLVTGFI--------------------QNGDLNRAEKLFHEMPQKN 293
W + G + + G L+ AEK+F + +
Sbjct: 242 VISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHS 301
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
VI++T+M+ +HGL E A+K+F+++ A + PN T + VL ACS +NEG +
Sbjct: 302 VISYTSMIMAKAKHGLGEAAVKLFDEMVAGR-INPNYVTLLGVLHACSHSGLVNEGLEYL 360
Query: 354 QLISK 358
L+++
Sbjct: 361 SLMAE 365
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 107/470 (22%), Positives = 186/470 (39%), Gaps = 99/470 (21%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DGP------------- 102
I+ ARKLFD M E ++ W ++I+GY G + A +F D P
Sbjct: 80 INTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFK 139
Query: 103 ---------------------DAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP--ERNV 139
+++V ++LV+ Y K N +E A R+F M RNV
Sbjct: 140 ACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNV 199
Query: 140 RSWNTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSECGRIEDAQWHF 193
SW +MI YA+N + +A++LFR N ++I A S GR++
Sbjct: 200 VSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQ------ 253
Query: 194 NQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALE 253
W + GL G + N V ++ YAK L A +
Sbjct: 254 ----------WGKVAHGLVTRGGYES-----------NTVVATSLLDMYAKCGSLSCAEK 292
Query: 254 LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHGL 309
+F R+ + S+ +++ ++G A KLF EM N +T ++ GL
Sbjct: 293 IFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGL 352
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS 369
E L+ + + + + P++ + V+ ++E ++ + I A ++ +
Sbjct: 353 VNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGA-EQGALLWG 411
Query: 370 ALINMYSKCGELHIARRIFDEGLLR-----QRDLISWNGMIAAYAHHGYGKEAINLFNKM 424
AL++ G LH I E R Q+ ++ + AYA G +++ +L +M
Sbjct: 412 ALLS----AGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEM 467
Query: 425 QELG---------FQANDVTYVELL--TACSHAGLVEEGLQYFDKLLKNR 463
+ G + D YV +C +G +E L+ +K +K R
Sbjct: 468 KRSGNVKERACSWIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRMKER 517
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 101/252 (40%), Gaps = 60/252 (23%)
Query: 272 GFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTG 331
GFIQN L A LF +PQ + ++ H LSE F L
Sbjct: 4 GFIQNVHLAPATSLF--VPQYKNDFFHLKTKAFLVHKLSESTNAAFTNL----------- 50
Query: 332 TFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
+H L K F T+ V+ L+ Y K E++ AR++FDE
Sbjct: 51 --------------------LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDE- 89
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE-LGFQANDVTYVELLTACS------ 444
+ + +++SW +I+ Y G + A+++F KM E N+ T+ + ACS
Sbjct: 90 -MCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESR 148
Query: 445 -----HAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL-GVD 498
HA L GL+ R+I V LVD+ G+ ++ A + + + G
Sbjct: 149 IGKNIHARLEISGLR--------RNIVVSSS----LVDMYGKCNDVETARRVFDSMIGYG 196
Query: 499 LSLSVWGPLLAG 510
++ W ++
Sbjct: 197 RNVVSWTSMITA 208
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 236 bits (601), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 140/443 (31%), Positives = 235/443 (53%), Gaps = 54/443 (12%)
Query: 80 GTMINGYIMCGVIKEA-------RKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
G M + + VIK A + L + KD +++ YVK +E A ++F
Sbjct: 101 GIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFD 160
Query: 133 EMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWH 192
++ +R WN MI GY + G E+A LF MPE +VVSW +I ++ +E+A+ +
Sbjct: 161 QISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKY 220
Query: 193 FNQMRERDVKSWTTMVDGLAINGRVDDARELFD---RMPVR-NVVSWNVMIKG------- 241
F++M E+ V SW M+ G A NG +DA LF+ R+ VR N +W ++I
Sbjct: 221 FDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 242 ----------------------------YAKNRRLDEALELFERM-PERDMPSWNTLVTG 272
+AK R + A +F + +R++ +WN +++G
Sbjct: 281 SLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISG 340
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+ + GD++ A +LF MP++NV++W +++ GY +G + A++ F + KP+ T
Sbjct: 341 YTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVT 400
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
++VL AC +A L G I I K + + +LI MY++ G L A+R+FDE
Sbjct: 401 MISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDE-- 458
Query: 393 LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
+++RD++S+N + A+A +G G E +NL +KM++ G + + VTY +LTAC+ AGL++EG
Sbjct: 459 MKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEG 518
Query: 453 LQYFDKLLKNRSIQVREDHYACL 475
+ F K ++N DHYAC+
Sbjct: 519 QRIF-KSIRNP----LADHYACM 536
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/382 (30%), Positives = 197/382 (51%), Gaps = 68/382 (17%)
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQN 276
V+ AR++FD++ R WNVMI GY K +EA +LF+ MPE D+ SW ++TGF +
Sbjct: 152 VESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKV 211
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
DL A K F MP+K+V++W AM++GY Q+G +E+AL++FN + ++PN T+V V
Sbjct: 212 KDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDM-LRLGVRPNETTWVIV 270
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDE------ 390
+ ACS A + + + +LI + + + +V +AL++M++KC ++ ARRIF+E
Sbjct: 271 ISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRN 330
Query: 391 ---------GLLR---------------QRDLISWNGMIAAYAHHGYGKEAINLFNKMQE 426
G R +R+++SWN +IA YAH+G AI F M +
Sbjct: 331 LVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMID 390
Query: 427 LG-FQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRL 485
G + ++VT + +L+AC H +E G D + KN+ I++ + Y L+ + R G L
Sbjct: 391 YGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQ-IKLNDSGYRSLIFMYARGGNL 449
Query: 486 KEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMY 545
EA + + +++ + +Y+ L +
Sbjct: 450 WEAKRVFD-----------------------------------EMKERDVVSYNTLFTAF 474
Query: 546 ASVGKWKEAANVRMKMKDKGLK 567
A+ G E N+ KMKD+G++
Sbjct: 475 AANGDGVETLNLLSKMKDEGIE 496
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 184/377 (48%), Gaps = 84/377 (22%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-GPDAMKDVVTWTALVNGYV 119
++ ARK+FD++ +R W MI+GY G +EA KLFD P+ DVV+WT ++ G+
Sbjct: 152 VESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPE--NDVVSWTVMITGFA 209
Query: 120 KLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNT 175
K+ +E A + F MPE++V SWN M+ GYA+NG TE AL LF M N +W
Sbjct: 210 KVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVI 269
Query: 176 IIKALS-----------------------------------ECGRIEDAQWHFNQM-RER 199
+I A S +C I+ A+ FN++ +R
Sbjct: 270 VISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQR 329
Query: 200 DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM- 258
++ +W M+ G G + AR+LFD MP RNVVSWN +I GYA N + A+E FE M
Sbjct: 330 NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMI 389
Query: 259 -------PERDMPS--------------------------------WNTLVTGFIQNGDL 279
E M S + +L+ + + G+L
Sbjct: 390 DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNL 449
Query: 280 NRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
A+++F EM +++V+++ + T + +G E L + +K++ D ++P+ T+ +VL A
Sbjct: 450 WEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMK-DEGIEPDRVTYTSVLTA 508
Query: 340 CSDLAGLNEGQQIHQLI 356
C+ L EGQ+I + I
Sbjct: 509 CNRAGLLKEGQRIFKSI 525
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/320 (31%), Positives = 155/320 (48%), Gaps = 57/320 (17%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG------------------- 101
+++ARK FDRMPE+ + W M++GY G ++A +LF+
Sbjct: 214 LENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA 273
Query: 102 ------PDAMKDVVTW-------------TALVNGYVKLNQIEEAERLFYEM-PERNVRS 141
P + +V TAL++ + K I+ A R+F E+ +RN+ +
Sbjct: 274 CSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVT 333
Query: 142 WNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER-D 200
WN MI GY R G A LF MP+RNVVSWN++I + G+ A F M + D
Sbjct: 334 WNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGD 393
Query: 201 VK-SWTTMVDGLAINGRVDDARELFDRMP--VR------NVVSWNVMIKGYAKNRRLDEA 251
K TM+ L+ G + D EL D + +R N + +I YA+ L EA
Sbjct: 394 SKPDEVTMISVLSACGHMADL-ELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEA 452
Query: 252 LELFERMPERDMPSWNTLVTGFIQNGD----LNRAEKLFHEMPQKNVITWTAMMTGYVQH 307
+F+ M ERD+ S+NTL T F NGD LN K+ E + + +T+T+++T +
Sbjct: 453 KRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRA 512
Query: 308 GLSEEALKIFNKLQ---ADH 324
GL +E +IF ++ ADH
Sbjct: 513 GLLKEGQRIFKSIRNPLADH 532
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 142/355 (40%), Gaps = 74/355 (20%)
Query: 285 LFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLA 344
+F + NV +M + + ++ + L+++ + ++ + P+ +F V+ +
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQ-RSRCGIMPDAFSFPVVIKSAGRF- 119
Query: 345 GLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDE-------------- 390
G L+ K F + YV + +++MY K + AR++FD+
Sbjct: 120 ----GILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 391 -------------------------------GLLRQRDL---------------ISWNGM 404
G + +DL +SWN M
Sbjct: 176 GYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAM 235
Query: 405 IAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGL-QYFDKLLKNR 463
++ YA +G+ ++A+ LFN M LG + N+ T+V +++ACS + L + KL+ +
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA--DPSLTRSLVKLIDEK 293
Query: 464 SIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLV 523
+++ L+D+ + ++ A I LG +L W +++G G+
Sbjct: 294 RVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMS----S 349
Query: 524 AKKILKIEPE-NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEV 577
A+++ P+ N +++ L YA G+ A M D G K + + V
Sbjct: 350 ARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISV 404
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 140/443 (31%), Positives = 235/443 (53%), Gaps = 28/443 (6%)
Query: 153 GQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDA-QWHFNQMRERDVKSWTTMVDGL 211
G A+ +FR +P+ WN II+ + A W+ + +++ S VD L
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDAL 110
Query: 212 AINGRVDDARELFDRMPVRNVVSWNVMIKGYAK-NRRLDEALELFERMPERDMPSWNTLV 270
+ F + + M + + + NRR A L TL+
Sbjct: 111 TCS---------FTLKACARALCSSAMDQLHCQINRRGLSADSLL----------CTTLL 151
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNT 330
+ +NGDL A KLF EMP ++V +W A++ G V + EA++++ +++ + ++ +
Sbjct: 152 DAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETE-GIRRSE 210
Query: 331 GTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDE 390
T V LGACS L + EG+ I S ++ V +A I+MYSKCG + A ++F E
Sbjct: 211 VTVVAALGACSHLGDVKEGENIFHGYS----NDNVIVSNAAIDMYSKCGFVDKAYQVF-E 265
Query: 391 GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVE 450
++ +++WN MI +A HG A+ +F+K+++ G + +DV+Y+ LTAC HAGLVE
Sbjct: 266 QFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVE 325
Query: 451 EGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
GL F+ + + ++ HY C+VDL RAGRL+EA +II + + +W LL
Sbjct: 326 YGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGA 384
Query: 511 CNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQP 570
++ + ++ ++ +++I ++ N G + LLSN+YA+ G+WK+ VR M+ K +KK P
Sbjct: 385 SEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIP 444
Query: 571 GCSWVEVGNTVQVFVVGDKSHSQ 593
G S++E T+ F DKSH Q
Sbjct: 445 GLSYIEAKGTIHEFYNSDKSHEQ 467
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 135/313 (43%), Gaps = 55/313 (17%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----------PERNVVSWNTI 176
A ++F +P+ WN +I G+A + A +R M + ++ +
Sbjct: 56 AVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFT 115
Query: 177 IKALSE--CGRIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVR 230
+KA + C D Q H Q+ R + + TT++D + NG + A +LFD MPVR
Sbjct: 116 LKACARALCSSAMD-QLHC-QINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVR 173
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFI----QNGDLNRAEKLF 286
+V SWN +I G R EA+EL++RM + V + GD+ E +F
Sbjct: 174 DVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF 233
Query: 287 HEMP--------------------------------QKNVITWTAMMTGYVQHGLSEEAL 314
H +K+V+TW M+TG+ HG + AL
Sbjct: 234 HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRAL 293
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
+IF+KL+ D+ +KP+ +++ L AC + G + ++ + + ++++
Sbjct: 294 EIFDKLE-DNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDL 352
Query: 375 YSKCGELHIARRI 387
S+ G L A I
Sbjct: 353 LSRAGRLREAHDI 365
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 115/251 (45%), Gaps = 33/251 (13%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
D + T L++ Y K + A +LF EMP R+V SWN +I G + +A++L++RM
Sbjct: 143 DSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRME 202
Query: 167 ERNV-VSWNTIIKALSEC---GRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARE 222
+ S T++ AL C G +++ + F+ +V +D + G VD A +
Sbjct: 203 TEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQ 262
Query: 223 LFDRMP-VRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNR 281
+F++ ++VV+WN MI G+A + ALE+F+++ + NG
Sbjct: 263 VFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLED---------------NG---- 303
Query: 282 AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACS 341
+ + +++ A +T GL E L +FN + A ++ N + V+ S
Sbjct: 304 --------IKPDDVSYLAALTACRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLS 354
Query: 342 DLAGLNEGQQI 352
L E I
Sbjct: 355 RAGRLREAHDI 365
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 114/260 (43%), Gaps = 13/260 (5%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF---DGPDA 104
C T + + G + A KLFD MP RD+ W +I G + EA +L+ +
Sbjct: 147 CTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGI 206
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
+ VT A + L ++E E +F+ NV N ID Y++ G +KA +F +
Sbjct: 207 RRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQ 266
Query: 165 MP-ERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDD 219
+++VV+WNT+I + G A F+++ + +K S+ + G V+
Sbjct: 267 FTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEY 326
Query: 220 ARELFDRMPV----RNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPS-WNTLVTGFI 274
+F+ M RN+ + ++ ++ RL EA ++ M P W +L+
Sbjct: 327 GLSVFNNMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASE 386
Query: 275 QNGDLNRAEKLFHEMPQKNV 294
D+ AE E+ + V
Sbjct: 387 IYSDVEMAEIASREIKEMGV 406
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 231 bits (590), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 200/347 (57%), Gaps = 2/347 (0%)
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP 290
+V ++ Y + +A ++F+ MPER+ +WN ++TG GD +A +MP
Sbjct: 157 HVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMP 216
Query: 291 QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQ 350
+ V++WT ++ GY + +EA+ +F+++ A A+KPN T + +L A +L L
Sbjct: 217 NRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCG 276
Query: 351 QIHQLISKTAFQESTY-VVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYA 409
+H + K F V ++LI+ Y+KCG + A + F E +++L+SW MI+A+A
Sbjct: 277 SVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFA 336
Query: 410 HHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG-LQYFDKLLKNRSIQVR 468
HG GKEA+++F M+ LG + N VT + +L ACSH GL EE L++F+ ++ I
Sbjct: 337 IHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPD 396
Query: 469 EDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 528
HY CLVD+ R GRL+EA I + ++ VW LL C+V+ +A++ + V +K++
Sbjct: 397 VKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLM 456
Query: 529 KIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWV 575
++E + G Y L+SN++ G++ +A R +M +G+ K PG S V
Sbjct: 457 ELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 129/295 (43%), Gaps = 45/295 (15%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNGYVKLNQIEEAERLF 131
E +++ ++ Y++ G + +A K+FD P+ ++ VTW ++ G L E+A
Sbjct: 155 ESHVYVQTALVGMYLVGGNMIDAHKVFDEMPE--RNPVTWNVMITGLTNLGDFEKALCFL 212
Query: 132 YEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTI-----------IKAL 180
+MP R V SW T+IDGYAR + ++A+ LF RM + + N I + L
Sbjct: 213 EKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDL 272
Query: 181 SECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMP--VRNVVSWNVM 238
CG + A D++ +++D A G + A + F +P +N+VSW M
Sbjct: 273 KMCGSVH-AYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTM 331
Query: 239 IKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWT 298
I +A + EA+ +F+ M + + N +T
Sbjct: 332 ISAFAIHGMGKEAVSMFKDMERLGL---------------------------KPNRVTMI 364
Query: 299 AMMTGYVQHGLSEEA-LKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
+++ GL+EE L+ FN + ++ + P+ + ++ L E ++I
Sbjct: 365 SVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 146/345 (42%), Gaps = 29/345 (8%)
Query: 2 KKLPPL-SFILMHAPKLKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGR 60
K LPP SF + K ++P F T S + + G
Sbjct: 114 KSLPPFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGN 173
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-PDAMKDVVTWTALVNGYV 119
+ DA K+FD MPER+ W MI G G ++A + P+ + VV+WT +++GY
Sbjct: 174 MIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN--RTVVSWTTIIDGYA 231
Query: 120 KLNQIEEAERLFYEMPERNVRSWN-----TMIDGYARNGQTEKALDLFRRMPERNVVSW- 173
++++ +EA LF M + N ++ G + + + +R V
Sbjct: 232 RVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCD 291
Query: 174 ----NTIIKALSECGRIEDAQWHFNQMR--ERDVKSWTTMVDGLAINGRVDDARELFDRM 227
N++I A ++CG I+ A F ++ +++ SWTTM+ AI+G +A +F M
Sbjct: 292 IRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM 351
Query: 228 ------PVRNVVSWNVMIKGYAKNRRLDEALELFERMPER-----DMPSWNTLVTGFIQN 276
P R V +V+ +E LE F M D+ + LV +
Sbjct: 352 ERLGLKPNR-VTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRK 410
Query: 277 GDLNRAEKLFHEMP-QKNVITWTAMMTGYVQHGLSEEALKIFNKL 320
G L AEK+ E+P ++ + W ++ + +E A ++ KL
Sbjct: 411 GRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKL 455
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 59/269 (21%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD---GPDAM 105
N I+ L G + A ++MP R + W T+I+GY KEA LF DA+
Sbjct: 193 NVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAI 252
Query: 106 K-------------------------------------DVVTWTALVNGYVKLNQIEEAE 128
K D+ +L++ Y K I+ A
Sbjct: 253 KPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAF 312
Query: 129 RLFYEMP--ERNVRSWNTMIDGYARNGQTEKALDLFRRMPER-----NVVSWNTIIKALS 181
+ F E+P +N+ SW TMI +A +G ++A+ +F+ M ER N V+ +++ A S
Sbjct: 313 KFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDM-ERLGLKPNRVTMISVLNACS 371
Query: 182 ECGRIEDAQWH-FNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPV-RNVVS 234
G E+ FN M DVK + +VD L GR+++A ++ +P+ V
Sbjct: 372 HGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVV 431
Query: 235 WNVMIKGYAKNRRLDEALELFERMPERDM 263
W +++ + D+A EL ER+ + M
Sbjct: 432 WRMLLGACSV---YDDA-ELAERVTRKLM 456
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 228 bits (582), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 123/340 (36%), Positives = 197/340 (57%), Gaps = 16/340 (4%)
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
++++ L A K+F E+PQ +V+ W +M GYV+ GL E L++F ++ L+P+ +
Sbjct: 162 YVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVK-GLEPDEFS 220
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQES-TYVVSALINMYSKCGELHIARRIFDEG 391
T L AC+ + L +G+ IH+ + K ++ ES +V +AL++MY+KCG + A +F +
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKK- 279
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQ-ELGFQANDVTYVELLTACSHAGLVE 450
L +R++ SW +I YA +GY K+A+ +++ E G + + V + +L AC+H G +E
Sbjct: 280 -LTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 451 EGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
EG + + I + +HY+C+VDL RAGRL +A N+IE + + SVWG LL G
Sbjct: 339 EGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNG 398
Query: 511 CNVHGNADIGKLVAKKILKIEP----ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
C H N ++G+L K +L +E E LSN+Y SV + EA+ VR ++ +G+
Sbjct: 399 CRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGV 458
Query: 567 KKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHT 606
+K PG S +EV V FV GD SH LL +HT
Sbjct: 459 RKTPGWSVLEVDGNVTKFVSGDVSHPN-------LLQIHT 491
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 50/237 (21%)
Query: 63 DARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAM---------- 105
DARK+FD +P+ D+ W ++NGY+ CG+ E ++F PD
Sbjct: 170 DARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA 229
Query: 106 ----------------------KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWN 143
DV TALV+ Y K IE A +F ++ RNV SW
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 144 TMIDGYARNGQTEKALDLFRRMPERNVVSWNTII--KALSEC---GRIEDAQWHFNQMRE 198
+I GYA G +KA+ R+ + + ++++ L+ C G +E+ + M
Sbjct: 290 ALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEA 349
Query: 199 R-----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVS-WNVMIKGYAKNRRLD 249
R + ++ +VD + GR+DDA L ++MP++ + S W ++ G ++ ++
Sbjct: 350 RYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVE 406
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 115/255 (45%), Gaps = 23/255 (9%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
+ D T ++ YV+ + +A ++F E+P+ +V W+ +++GY R G + L++FR
Sbjct: 149 LSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFRE 208
Query: 165 M----PERNVVSWNTIIKALSECGRIEDAQWHFNQMR-----ERDVKSWTTMVDGLAING 215
M E + S T + A ++ G + +W ++ E DV T +VD A G
Sbjct: 209 MLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCG 268
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLV----- 270
++ A E+F ++ RNV SW +I GYA +A+ ER+ D +++V
Sbjct: 269 CIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDSVVLLGVL 328
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVIT-----WTAMMTGYVQHGLSEEALKIFNKLQADHA 325
G L + M + IT ++ ++ + G ++AL + K+
Sbjct: 329 AACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKM----P 384
Query: 326 LKPNTGTFVTVLGAC 340
+KP + +L C
Sbjct: 385 MKPLASVWGALLNGC 399
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 125/266 (46%), Gaps = 14/266 (5%)
Query: 261 RDMPSWNTLVTGFIQNGDLNR----AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKI 316
R+ + + L+T F+ +LN+ A +F + N + M+ + L+
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 317 FNKL--QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA-FQESTYVVSALIN 373
F + + + + P+ TF ++ AC + G+QIH + K F ++V + ++
Sbjct: 101 FLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLR 160
Query: 374 MYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
+Y + L AR++FDE + Q D++ W+ ++ Y G G E + +F +M G + ++
Sbjct: 161 IYVEDKLLLDARKVFDE--IPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDE 218
Query: 434 VTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA--CLVDLCGRAGRLKEAFNI 491
+ LTAC+ G + +G ++ + +K +S + D + LVD+ + G ++ A +
Sbjct: 219 FSVTTALTACAQVGALAQG-KWIHEFVKKKS-WIESDVFVGTALVDMYAKCGCIETAVEV 276
Query: 492 IEGLGVDLSLSVWGPLLAGCNVHGNA 517
+ L S W L+ G +G A
Sbjct: 277 FKKLTRRNVFS-WAALIGGYAAYGYA 301
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 137/333 (41%), Gaps = 59/333 (17%)
Query: 79 WGTMINGYIMCGVIKEARK---LFDGPDAMKDVVTWTALVNGYVKLNQIEE----AERLF 131
W ++I C +K+ + LF ++ + L+ ++ L + + A +F
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIF 70
Query: 132 YEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM---PERNVV-SWNT----IIKALSEC 183
+ N ++TMI +R+ Q L F M E ++ S+ T I+ L C
Sbjct: 71 DSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKAC 130
Query: 184 GRIEDAQWHF----NQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMI 239
Q H N + D T ++ + + DAR++FD +P +VV W+V++
Sbjct: 131 FFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLM 190
Query: 240 KGYAKNRRLDEALELFERM----------------------------------------P 259
GY + E LE+F M
Sbjct: 191 NGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWI 250
Query: 260 ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
E D+ LV + + G + A ++F ++ ++NV +W A++ GY +G +++A+ +
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLER 310
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
L+ + +KP++ + VL AC+ L EG+ +
Sbjct: 311 LEREDGIKPDSVVLLGVLAACAHGGFLEEGRSM 343
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 251/477 (52%), Gaps = 16/477 (3%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVS 172
+L+ Y + +E+A ++F EMP+ +V SWN+++ GY ++G+ ++ + LF + +V
Sbjct: 95 SLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFP 154
Query: 173 WN-TIIKALSECGRIE----DAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDAREL 223
+ AL+ C R+ A H ++ + +V ++D G +DDA +
Sbjct: 155 NEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLV 214
Query: 224 FDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAE 283
F M ++ VSWN ++ ++N +L+ L F +MP D ++N L+ F+++GD N A
Sbjct: 215 FQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAF 274
Query: 284 KLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
++ +MP N +W ++TGYV S EA + F K+ + ++ + + VL A + L
Sbjct: 275 QVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSS-GVRFDEYSLSIVLAAVAAL 333
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNG 403
A + G IH K V SALI+MYSKCG L A +F + +++LI WN
Sbjct: 334 AVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMF--WTMPRKNLIVWNE 391
Query: 404 MIAAYAHHGYGKEAINLFNKM-QELGFQANDVTYVELLTACSHAGL-VEEGLQYFDKLLK 461
MI+ YA +G EAI LFN++ QE + + T++ LL CSH + +E L YF+ ++
Sbjct: 392 MISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMIN 451
Query: 462 NRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGK 521
I+ +H L+ G+ G + +A +I+ G W LL C+ + K
Sbjct: 452 EYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAK 511
Query: 522 LVAKKILKI--EPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVE 576
VA K++++ ++ Y ++SN+YA +W+E +R M++ G+ K+ G SW++
Sbjct: 512 TVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 209/453 (46%), Gaps = 57/453 (12%)
Query: 25 INGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMIN 84
++GY ++T +S M+ TS S ++DA K+FD MP+ D+ W ++++
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDS-------LEDAHKVFDEMPDPDVISWNSLVS 129
Query: 85 GYIMCGVIKEARKLF---DGPDAMKDVVTWTALVNGYVKLN-----QIEEAERLFYEMPE 136
GY+ G +E LF D + ++TA + +L+ ++ + + +
Sbjct: 130 GYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEK 189
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQM 196
NV N +ID Y + G + A+ +F+ M E++ VSWN I+ + S G++E W F+QM
Sbjct: 190 GNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Query: 197 RERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFE 256
D ++ ++D +G ++A ++ MP N SWN ++ GY + + EA E F
Sbjct: 250 PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFT 309
Query: 257 RMPERDM-------------------PSWNTLVTG--------------------FIQNG 277
+M + W +L+ + + G
Sbjct: 310 KMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCG 369
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
L AE +F MP+KN+I W M++GY ++G S EA+K+FN+L+ + LKP+ TF+ +L
Sbjct: 370 MLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLL 429
Query: 338 GACSDLAGLNEGQ--QIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ 395
CS E +I++ + S +LI + GE+ A+++ E
Sbjct: 430 AVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQE-FGFG 488
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELG 428
D ++W ++ A + K A + KM ELG
Sbjct: 489 YDGVAWRALLGACSARKDLKAAKTVAAKMIELG 521
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 46/296 (15%)
Query: 172 SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGR---VDDARELFDRMP 228
SW+TI+ AL+ G I + + + + + +V L ++G V R+L +
Sbjct: 23 SWSTIVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 229 VRNVVS----WNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEK 284
VS N +++ Y + L++A ++F+ MP+ D+ SWN+LV+G++Q+G
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 285 LFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLA 344
LF E+ + +V PN +F L AC+ L
Sbjct: 143 LFLELHRSDVF--------------------------------PNEFSFTAALAACARLH 170
Query: 345 GLNEGQQIHQLISKTAFQESTYVV-SALINMYSKCGELHIARRIFDEGLLRQRDLISWNG 403
G IH + K ++ VV + LI+MY KCG + A +F + ++D +SWN
Sbjct: 171 LSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQH--MEEKDTVSWNA 228
Query: 404 MIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
++A+ + +G + + F++M + VTY EL+ A +G Q +
Sbjct: 229 IVASCSRNGKLELGLWFFHQMP----NPDTVTYNELIDAFVKSGDFNNAFQVLSDM 280
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 210/343 (61%), Gaps = 18/343 (5%)
Query: 267 NTLVTGFIQN-GDLNRAEKLFHEMPQK-NVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
T + GF + GD++ A ++F E P+K N++ WTAM++ Y ++ S EA+++F +++A+
Sbjct: 103 QTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEK 162
Query: 325 ALKPNTGTFVTV-LGACSDLAGLNEGQQIHQ--LISKTAFQESTYVVSALINMYSKCGEL 381
G VTV L AC+DL + G++I+ + K + ++L+NMY K GE
Sbjct: 163 I--ELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGET 220
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM------QELGFQANDVT 435
AR++FDE + ++D+ ++ MI YA +G +E++ LF KM Q+ NDVT
Sbjct: 221 EKARKLFDESM--RKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVT 278
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
++ +L ACSH+GLVEEG ++F ++ + +++ RE H+ C+VDL R+G LK+A I +
Sbjct: 279 FIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQM 338
Query: 496 GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAA 555
+ + +W LL C++HGN ++G+ V ++I +++ ++ G Y LSN+YAS G W E +
Sbjct: 339 PIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKS 398
Query: 556 NVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSELLG 598
+R +++ ++ PG SW+E+G+ + FV G ++ + ++G
Sbjct: 399 KMRDRVRK---RRMPGKSWIELGSIINEFVSGPDNNDEQLMMG 438
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 170/386 (44%), Gaps = 74/386 (19%)
Query: 143 NTMIDGYARNGQTEKALDLFR---RMPERNVVSWNTI----IKALSECGRIEDAQWH--- 192
N + Y +G+ KAL FR R V S++ + + + + ++ Q H
Sbjct: 32 NHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALV 91
Query: 193 ----FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMIKGYAKNRR 247
FN + ++ T++V + G VD AR++FD P + N+V W MI Y +N
Sbjct: 92 RKLGFNAV----IQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENEN 147
Query: 248 LDEALELFERMPER-----------------------------------------DMPSW 266
EA+ELF+RM D+
Sbjct: 148 SVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLR 207
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQA---- 322
N+L+ ++++G+ +A KLF E +K+V T+T+M+ GY +G ++E+L++F K++
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS 267
Query: 323 -DHALKPNTGTFVTVLGACSDLAGLNEGQQ-IHQLISKTAFQESTYVVSALINMYSKCGE 380
D + PN TF+ VL ACS + EG++ +I + +++++ + G
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGH 327
Query: 381 LHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV---TYV 437
L A ++ ++ +I W ++ A + HG + L ++Q F+ + YV
Sbjct: 328 LKDAHEFINQMPIKPNTVI-WRTLLGACSLHG----NVELGEEVQRRIFELDRDHVGDYV 382
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNR 463
L + G+ +E + D++ K R
Sbjct: 383 ALSNIYASKGMWDEKSKMRDRVRKRR 408
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 59/262 (22%)
Query: 59 GRIDDARKLFDRMPER-DLHLWGTMINGYIMCGVIKEARKLFDGPDAMK----------- 106
G +D AR++FD PE+ ++ LW MI+ Y EA +LF +A K
Sbjct: 114 GDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVA 173
Query: 107 -----------------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPER 137
D+ +L+N YVK + E+A +LF E +
Sbjct: 174 LSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRK 233
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRMP----------ERNVVSWNTIIKALSECGRIE 187
+V ++ +MI GYA NGQ +++L+LF++M N V++ ++ A S G +E
Sbjct: 234 DVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVE 293
Query: 188 DAQWHFNQM------RERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMIK 240
+ + HF M + R+ + MVD +G + DA E ++MP++ N V W ++
Sbjct: 294 EGKRHFKSMIMDYNLKPREAH-FGCMVDLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLG 352
Query: 241 GYAKNRRLDEALELFERMPERD 262
+ + ++ E+ R+ E D
Sbjct: 353 ACSLHGNVELGEEVQRRIFELD 374
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 124/281 (44%), Gaps = 33/281 (11%)
Query: 76 LHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP 135
+ + +++ Y G + AR++FD +++V WTA+++ Y + EA LF M
Sbjct: 100 IQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRME 159
Query: 136 ERNVRSWNTMI----DGYARNGQTEKALDLFRRMPER------NVVSWNTIIKALSECGR 185
+ ++ A G + +++ R +R ++ N+++ + G
Sbjct: 160 AEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGE 219
Query: 186 IEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMP----------VRNVVSW 235
E A+ F++ +DV ++T+M+ G A+NG+ ++ ELF +M N V++
Sbjct: 220 TEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTF 279
Query: 236 NVMIKGYAKNRRLDEALELFERM-------PERDMPSWNTLVTGFIQNGDLNRAEKLFHE 288
++ + + ++E F+ M P + +V F ++G L A + ++
Sbjct: 280 IGVLMACSHSGLVEEGKRHFKSMIMDYNLKPRE--AHFGCMVDLFCRSGHLKDAHEFINQ 337
Query: 289 MPQK-NVITWTAMMTGYVQHG---LSEEALKIFNKLQADHA 325
MP K N + W ++ HG L EE + +L DH
Sbjct: 338 MPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHV 378
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF---DGPDAM 105
N+ ++ + G + ARKLFD +D+ + +MI GY + G +E+ +LF D
Sbjct: 208 NSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQS 267
Query: 106 KDV------VTWTALVNGYVKLNQIEEAERLF------YEMPERNVRSWNTMIDGYARNG 153
+D VT+ ++ +EE +R F Y + R + M+D + R+G
Sbjct: 268 QDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAH-FGCMVDLFCRSG 326
Query: 154 QTEKALDLFRRMPER-NVVSWNTIIKALSECGRI---EDAQWHFNQMRERDVKSWTTMVD 209
+ A + +MP + N V W T++ A S G + E+ Q ++ V + + +
Sbjct: 327 HLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSN 386
Query: 210 GLAINGRVDDARELFDRMPVRNV 232
A G D+ ++ DR+ R +
Sbjct: 387 IYASKGMWDEKSKMRDRVRKRRM 409
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 135/452 (29%), Positives = 236/452 (52%), Gaps = 40/452 (8%)
Query: 158 ALDLFRRMPERNVVSWNTIIKALS-ECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGR 216
A +F + + WNT+I+A + + R E+A + +M ER S
Sbjct: 102 AFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSP------------ 149
Query: 217 VDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQN 276
D+ V+ I G+++ +++ ++ + D+ N L+ +
Sbjct: 150 --------DKHTFPFVLKACAYIFGFSEGKQVH--CQIVKHGFGGDVYVNNGLIHLYGSC 199
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
G L+ A K+F EMP++++++W +M+ V+ G + AL++F ++Q + +P+ T +V
Sbjct: 200 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ--RSFEPDGYTMQSV 257
Query: 337 LGACSDLAGLNEGQQIHQLISKTA---FQESTYVVSALINMYSKCGELHIARRIFDEGLL 393
L AC+ L L+ G H + + V ++LI MY KCG L +A ++F +
Sbjct: 258 LSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQG--M 315
Query: 394 RQRDLISWNGMIAAYAHHGYGKEAINLFNKM--QELGFQANDVTYVELLTACSHAGLVEE 451
++RDL SWN MI +A HG +EA+N F++M + + N VT+V LL AC+H G V +
Sbjct: 316 QKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNK 375
Query: 452 GLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGC 511
G QYFD ++++ I+ +HY C+VDL RAG + EA +++ + + +W LL C
Sbjct: 376 GRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDAC 435
Query: 512 NVHG-NADIGKLVAKKILKIEPEN-------AGTYSLLSNMYASVGKWKEAANVRMKMKD 563
G + ++ + +A+ I+ + +N +G Y LLS +YAS +W + VR M +
Sbjct: 436 CKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSE 495
Query: 564 KGLKKQPGCSWVEVGNTVQVFVVGDKSHSQSE 595
G++K+PGCS +E+ F GD SH Q++
Sbjct: 496 HGIRKEPGCSSIEINGISHEFFAGDTSHPQTK 527
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 123/246 (50%), Gaps = 9/246 (3%)
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLS--EEALKIFNKLQADHALKPNTGTFV 334
D+N A ++F + + W ++ H +S EEA ++ K+ P+ TF
Sbjct: 97 SDVNYAFRVFDSIENHSSFMWNTLIRA-CAHDVSRKEEAFMLYRKMLERGESSPDKHTFP 155
Query: 335 TVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR 394
VL AC+ + G +EG+Q+H I K F YV + LI++Y CG L +AR++FDE +
Sbjct: 156 FVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDE--MP 213
Query: 395 QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
+R L+SWN MI A G A+ LF +MQ F+ + T +L+AC+ G + G
Sbjct: 214 ERSLVSWNSMIDALVRFGEYDSALQLFREMQR-SFEPDGYTMQSVLSACAGLGSLSLGTW 272
Query: 455 YFDKLLKNRSIQVREDHYA--CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN 512
LL+ + V D L+++ + G L+ A + +G+ L+ W ++ G
Sbjct: 273 AHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQ-KRDLASWNAMILGFA 331
Query: 513 VHGNAD 518
HG A+
Sbjct: 332 THGRAE 337
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 123/289 (42%), Gaps = 61/289 (21%)
Query: 77 HLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE 136
+++G + C ++K F G DV L++ Y ++ A ++F EMPE
Sbjct: 163 YIFGFSEGKQVHCQIVKHG---FGG-----DVYVNNGLIHLYGSCGCLDLARKVFDEMPE 214
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRMPER---------------------------- 168
R++ SWN+MID R G+ + AL LFR M
Sbjct: 215 RSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTWAH 274
Query: 169 -------------NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAING 215
+V+ N++I+ +CG + A+ F M++RD+ SW M+ G A +G
Sbjct: 275 AFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHG 334
Query: 216 RVDDARELFDRMPVR--NVVSWNVMIKGY--AKNRR--LDEALELFERMP-----ERDMP 264
R ++A FDRM + NV +V G A N R +++ + F+ M E +
Sbjct: 335 RAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALE 394
Query: 265 SWNTLVTGFIQNGDLNRAEKLFHEMPQK-NVITWTAMMTGYVQHGLSEE 312
+ +V + G + A + MP K + + W +++ + G S E
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 52/238 (21%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF---------DG-------- 101
G +D ARK+FD MPER L W +MI+ + G A +LF DG
Sbjct: 200 GCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLS 259
Query: 102 -----------------------PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERN 138
D DV+ +L+ Y K + AE++F M +R+
Sbjct: 260 ACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRD 319
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMPER------NVVSWNTIIKALSECGRIEDAQWH 192
+ SWN MI G+A +G+ E+A++ F RM ++ N V++ ++ A + G + + +
Sbjct: 320 LASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY 379
Query: 193 FNQMR-----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMIKGYAK 244
F+ M E ++ + +VD +A G + +A ++ MP++ + V W ++ K
Sbjct: 380 FDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCK 437
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 151/530 (28%), Positives = 272/530 (51%), Gaps = 51/530 (9%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
+VV T+LV+ Y + +++E+A R+ E++V W +++ G+ RN + ++A+ F M
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 167 ----ERNVVSWNTIIKALS-----------------------------------ECGRIE 187
+ N +++ I+ S +C E
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 188 -DAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGY 242
+A F M +V SWTT++ GL +G V D L M R NVV+ + +++
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 243 AKNRRLDEALE----LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWT 298
+K R + LE L R + +M N+LV + + ++ A + M +++ IT+T
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYT 497
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
+++T + + G E AL + N + D ++ + + + A ++L L G+ +H K
Sbjct: 498 SLVTRFNELGKHEMALSVINYMYGD-GIRMDQLSLPGFISASANLGALETGKHLHCYSVK 556
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAI 418
+ F + V+++L++MYSKCG L A+++F+E + D++SWNG+++ A +G+ A+
Sbjct: 557 SGFSGAASVLNSLVDMYSKCGSLEDAKKVFEE--IATPDVVSWNGLVSGLASNGFISSAL 614
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL 478
+ F +M+ + + VT++ LL+ACS+ L + GL+YF + K +I+ + +HY LV +
Sbjct: 615 SAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGI 674
Query: 479 CGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTY 538
GRAGRL+EA ++E + + + ++ LL C GN +G+ +A K L + P + Y
Sbjct: 675 LGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALY 734
Query: 539 SLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGD 588
LL+++Y GK + A R M +K L K+ G S VEV V FV D
Sbjct: 735 ILLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSED 784
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 204/464 (43%), Gaps = 52/464 (11%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD---GPDA 104
CN +S + I +ARKLFD M R + W MI+ + A LF+
Sbjct: 61 CNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGT 120
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALD 160
+ T++++V L I R+ + E N +++ D Y++ GQ ++A +
Sbjct: 121 HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACE 180
Query: 161 LFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGR 216
LF + + +SW +I +L + +A +++M + V ++ ++ + G
Sbjct: 181 LFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG- 239
Query: 217 VDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTG 272
++ + + + VR NVV ++ Y++ ++++A+ + E+D+ W ++V+G
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
F++N A F EM L+PN T
Sbjct: 300 FVRNLRAKEAVGTFLEMRSL--------------------------------GLQPNNFT 327
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI-ARRIFDEG 391
+ +L CS + L+ G+QIH K F++ST V +AL++MY KC + A R+F G
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVF--G 385
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEE 451
+ +++SW +I HG+ ++ L +M + + N VT +L ACS V
Sbjct: 386 AMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRR 445
Query: 452 GLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
L+ LL+ R + LVD + ++ A+N+I +
Sbjct: 446 VLEIHAYLLR-RHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 156/304 (51%), Gaps = 14/304 (4%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
N L++ +++ + A KLF EM + V WT M++ + + AL +F ++ A
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMAS-GT 120
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
PN TF +V+ +C+ L ++ G ++H + KT F+ ++ V S+L ++YSKCG+ A
Sbjct: 121 HPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACE 180
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHA 446
+F L+ D ISW MI++ +EA+ +++M + G N+ T+V+LL A S
Sbjct: 181 LFSS--LQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL 238
Query: 447 GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGP 506
GL E G ++ R I + LVD + ++++A ++ G + + +W
Sbjct: 239 GL-EFGKTIHSNIIV-RGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSG-EQDVFLWTS 295
Query: 507 LLAGC--NVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASV-----GKWKEAANVRM 559
+++G N+ +G + + L ++P N TYS + ++ ++V GK + +++
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLGLQPNNF-TYSAILSLCSAVRSLDFGKQIHSQTIKV 354
Query: 560 KMKD 563
+D
Sbjct: 355 GFED 358
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 349 GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAY 408
G IH + K E+ + + L+++Y K + AR++FDE + R + +W MI+A+
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDE--MSHRTVFAWTVMISAF 99
Query: 409 AHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVR 468
A++LF +M G N+ T+ ++ +C+ + G + ++K +
Sbjct: 100 TKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT-GFEGN 158
Query: 469 EDHYACLVDLCGRAGRLKEAFNIIEGL 495
+ L DL + G+ KEA + L
Sbjct: 159 SVVGSSLSDLYSKCGQFKEACELFSSL 185
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/340 (35%), Positives = 196/340 (57%), Gaps = 16/340 (4%)
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
++++ L A K+F E+PQ +V+ W +M GYV+ GL E L++F ++ ++P+ +
Sbjct: 162 YVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLV-RGIEPDEFS 220
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQES-TYVVSALINMYSKCGELHIARRIFDEG 391
T L AC+ + L +G+ IH+ + K + ES +V +AL++MY+KCG + A +F++
Sbjct: 221 VTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEK- 279
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQ-ELGFQANDVTYVELLTACSHAGLVE 450
L +R++ SW +I YA +GY K+A ++++ E G + + V + +L AC+H G +E
Sbjct: 280 -LTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLE 338
Query: 451 EGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
EG + + I + +HY+C+VDL RAGRL +A ++IE + + SVWG LL G
Sbjct: 339 EGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNG 398
Query: 511 CNVHGNADIGKLVAKKILKIEPENA----GTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
C H N ++G+L + +L +E N LSN+Y SV + EA VR ++ +G+
Sbjct: 399 CRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGI 458
Query: 567 KKQPGCSWVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHT 606
+K PG S +EV V FV GD SH LL +HT
Sbjct: 459 RKTPGWSLLEVDGIVTKFVSGDVSHPN-------LLQIHT 491
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 114/252 (45%), Gaps = 51/252 (20%)
Query: 49 NTSISRLCQEGRI-DDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD------- 100
T + R+ E ++ DARK+FD +P+ D+ W ++NGY+ CG+ E ++F
Sbjct: 155 QTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGI 214
Query: 101 GPDAM--------------------------------KDVVTWTALVNGYVKLNQIEEAE 128
PD DV TALV+ Y K IE A
Sbjct: 215 EPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAV 274
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTII--KALSEC--- 183
+F ++ RNV SW +I GYA G +KA R+ + + ++++ L+ C
Sbjct: 275 EVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDSVVLLGVLAACAHG 334
Query: 184 GRIEDAQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVS-WNV 237
G +E+ + M R + ++ +VD + GR+DDA +L ++MP++ + S W
Sbjct: 335 GFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIEKMPMKPLASVWGA 394
Query: 238 MIKGYAKNRRLD 249
++ G ++ ++
Sbjct: 395 LLNGCRTHKNVE 406
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 120/264 (45%), Gaps = 10/264 (3%)
Query: 261 RDMPSWNTLVTGFIQNGDLNR----AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKI 316
R+ + + L+T F+ +LN+ A +F + N + M+ + L+
Sbjct: 41 RNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRY 100
Query: 317 FNKL--QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA-FQESTYVVSALIN 373
F + + + + P+ TF ++ AC + G+QIH + K F +V + ++
Sbjct: 101 FLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLR 160
Query: 374 MYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
+Y + L AR++FDE + Q D++ W+ ++ Y G G E + +F +M G + ++
Sbjct: 161 IYVEDKLLFDARKVFDE--IPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDE 218
Query: 434 VTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIE 493
+ LTAC+ G + +G + + K R I+ LVD+ + G ++ A + E
Sbjct: 219 FSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFE 278
Query: 494 GLGVDLSLSVWGPLLAGCNVHGNA 517
L S W L+ G +G A
Sbjct: 279 KLTRRNVFS-WAALIGGYAAYGYA 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 136/333 (40%), Gaps = 59/333 (17%)
Query: 79 WGTMINGYIMCGVIKEARK---LFDGPDAMKDVVTWTALVNGYVKLNQIEE----AERLF 131
W ++I C +K+ + LF ++ + L+ ++ L + + A +F
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIF 70
Query: 132 YEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNT----IIKALSEC 183
+ N ++TMI +R+ Q L F M E S+ T I+ L C
Sbjct: 71 DSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKAC 130
Query: 184 GRIEDAQWHF----NQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMI 239
Q H N + D T ++ + + DAR++FD +P +VV W+V++
Sbjct: 131 FFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLM 190
Query: 240 KGYAKNRRLDEALELFERM----------------------------------------P 259
GY + E LE+F+ M
Sbjct: 191 NGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWI 250
Query: 260 ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNK 319
E D+ LV + + G + A ++F ++ ++NV +W A++ GY +G +++A ++
Sbjct: 251 ESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDR 310
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
++ + +KP++ + VL AC+ L EG+ +
Sbjct: 311 IEREDGIKPDSVVLLGVLAACAHGGFLEEGRTM 343
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/456 (28%), Positives = 238/456 (52%), Gaps = 33/456 (7%)
Query: 158 ALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRV 217
A +FR + + +NT+I+ E+A +N+M +R G
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQR---------------GNE 129
Query: 218 DDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALEL----FERMPERDMPSWNTLVTGF 273
D ++ ++K + + + E ++ F+ E D+ N+L+ +
Sbjct: 130 PDN------------FTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMY 177
Query: 274 IQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF 333
+ G++ + +F ++ K +W++M++ G+ E L +F + ++ LK
Sbjct: 178 GRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGM 237
Query: 334 VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLL 393
V+ L AC++ LN G IH + + + + V ++L++MY KCG L A IF + +
Sbjct: 238 VSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQK--M 295
Query: 394 RQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGL 453
+R+ ++++ MI+ A HG G+ A+ +F+KM + G + + V YV +L ACSH+GLV+EG
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGR 355
Query: 454 QYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNV 513
+ F ++LK ++ +HY CLVDL GRAG L+EA I+ + ++ + +W L+ C V
Sbjct: 356 RVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRV 415
Query: 514 HGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 573
N ++G++ A+++LK+ N G Y L+SN+Y+ W + A R ++ KGLK+ PG S
Sbjct: 416 RQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Query: 574 WVEVGNTVQVFVVGDKSHSQSELLGYLLLDLHTKMK 609
VE+ FV D+SH + + + +L + ++K
Sbjct: 476 IVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLK 511
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 149/296 (50%), Gaps = 10/296 (3%)
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
+N A +F + + M+ GYV EEAL +N++ +P+ T+ +L
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMM-QRGNEPDNFTYPCLL 139
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRD 397
AC+ L + EG+QIH + K + +V ++LINMY +CGE+ ++ +F++ L +
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEK--LESKT 197
Query: 398 LISWNGMIAAYAHHGYGKEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVEEGLQYF 456
SW+ M++A A G E + LF M E +A + V L AC++ G + G+
Sbjct: 198 AASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIH 257
Query: 457 DKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGN 516
LL+N S ++ LVD+ + G L +A +I + + +L+ + +++G +HG
Sbjct: 258 GFLLRNIS-ELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLT-YSAMISGLALHGE 315
Query: 517 ADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQP 570
+ + K++K +EP++ S+L N + G KE V +M +G K +P
Sbjct: 316 GESALRMFSKMIKEGLEPDHVVYVSVL-NACSHSGLVKEGRRVFAEMLKEG-KVEP 369
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 142/327 (43%), Gaps = 50/327 (15%)
Query: 122 NQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTII 177
N + A +F + + +NTMI GY E+AL + M +R + ++ ++
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 178 KALSECGRI-EDAQWH---FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVV 233
KA + I E Q H F E DV ++++ G ++ + +F+++ +
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 234 SWNVMIKGYAKNRRLDEALELFERM----------------------------------- 258
SW+ M+ A E L LF M
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 259 -----PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEA 313
E ++ +LV +++ G L++A +F +M ++N +T++AM++G HG E A
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 314 LKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH-QLISKTAFQESTYVVSALI 372
L++F+K+ + L+P+ +V+VL ACS + EG+++ +++ + + + L+
Sbjct: 320 LRMFSKMIKE-GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLV 378
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLI 399
++ + G L A + + D+I
Sbjct: 379 DLLGRAGLLEEALETIQSIPIEKNDVI 405
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
+++ T+LV+ YVK +++A +F +M +RN +++ MI G A +G+ E AL +F +M
Sbjct: 268 NIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMI 327
Query: 167 ----ERNVVSWNTIIKALSECGRIEDAQWHFNQMR-----ERDVKSWTTMVDGLAINGRV 217
E + V + +++ A S G +++ + F +M E + + +VD L G +
Sbjct: 328 KEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLL 387
Query: 218 DDARELFDRMPV-RNVVSWNVMI 239
++A E +P+ +N V W +
Sbjct: 388 EEALETIQSIPIEKNDVIWRTFL 410
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/327 (20%), Positives = 141/327 (43%), Gaps = 49/327 (14%)
Query: 66 KLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIE 125
++F E D+ + ++IN Y CG ++ + +F+ ++ K +W+++V+ +
Sbjct: 157 QVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLES-KTAASWSSMVSARAGMGMWS 215
Query: 126 EAERLFYEM-PERNVRSWNTMIDGYARNGQTEKALDL--------FRRMPERNVVSWNTI 176
E LF M E N+++ + + AL+L R + E N++ ++
Sbjct: 216 ECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSL 275
Query: 177 IKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWN 236
+ +CG ++ A F +M +R+ +++ M+ GLA++G + A +F +M
Sbjct: 276 VDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKM--------- 326
Query: 237 VMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
+ E L E D + +++ +G + ++F EM ++ +
Sbjct: 327 -----------IKEGL-------EPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVE 368
Query: 297 WTAMMTGYV-----QHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQ- 350
TA G + + GL EEAL+ + ++ N + T L C + GQ
Sbjct: 369 PTAEHYGCLVDLLGRAGLLEEALETIQSI----PIEKNDVIWRTFLSQCRVRQNIELGQI 424
Query: 351 QIHQLISKTAFQESTYVVSALINMYSK 377
+L+ ++ Y++ + N+YS+
Sbjct: 425 AAQELLKLSSHNPGDYLL--ISNLYSQ 449
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 231/405 (57%), Gaps = 20/405 (4%)
Query: 174 NTIIKALSECGRIEDAQWHFNQMRERDVK--SWTTMVDGLAINGRVDDARELFDRM---- 227
+ +++ + CG E A F++M +RD +W +++ G A G+ +DA L+ +M
Sbjct: 131 SKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDG 190
Query: 228 --PVRNVVSWNVMIKGYAKNRRLDEAL--ELFERMPERDMPSWNTLVTGFIQNGDLNRAE 283
P R + G + ++ EA+ +L + D+ N LV + + GD+ +A
Sbjct: 191 VKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKAR 250
Query: 284 KLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
+F +P K+ ++W +M+TGY+ HGL EAL IF +L + ++P+ +VL + +
Sbjct: 251 NVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIF-RLMVQNGIEPDKVAISSVL---ARV 306
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNG 403
G+Q+H + + + V +ALI +YSK G+L A IFD+ L +RD +SWN
Sbjct: 307 LSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQML--ERDTVSWNA 364
Query: 404 MIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR 463
+I+A++ + G + F +M + + +T+V +L+ C++ G+VE+G + F + K
Sbjct: 365 IISAHSKNSNG---LKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEY 421
Query: 464 SIQVREDHYACLVDLCGRAGRLKEAFN-IIEGLGVDLSLSVWGPLLAGCNVHGNADIGKL 522
I + +HYAC+V+L GRAG ++EA++ I++ +G++ +VWG LL C +HGN DIG++
Sbjct: 422 GIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEV 481
Query: 523 VAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
A+++ ++EP+N + LL +Y+ + ++ VR M D+GL+
Sbjct: 482 AAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGLE 526
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 161/383 (42%), Gaps = 79/383 (20%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDGPDAM-KDVVTWTALVNGYVKLNQIEEAERLFYE 133
+L + ++ Y CG + A ++FD W +L++GY +L Q E+A L+++
Sbjct: 126 NLGISSKLVRLYASCGYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 134 MPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQ--- 190
M E V+ P+R T + L CG I Q
Sbjct: 186 MAEDGVK-------------------------PDR-----FTFPRVLKACGGIGSVQIGE 215
Query: 191 -WHFNQMRE---RDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNR 246
H + ++E DV +V A G + AR +FD +P ++ VSWN M+ GY +
Sbjct: 216 AIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHG 275
Query: 247 RLDEALELFERMPE-----------------------RDMPSW-------------NTLV 270
L EAL++F M + R + W N L+
Sbjct: 276 LLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGMEWELSVANALI 335
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNT 330
+ + G L +A +F +M +++ ++W A+++ H + LK F ++ +A KP+
Sbjct: 336 VLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANA-KPDG 391
Query: 331 GTFVTVLGACSDLAGLNEGQQIHQLISKT-AFQESTYVVSALINMYSKCGELHIARRIFD 389
TFV+VL C++ + +G+++ L+SK + ++N+Y + G + A +
Sbjct: 392 ITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIV 451
Query: 390 EGLLRQRDLISWNGMIAAYAHHG 412
+ + + W ++ A HG
Sbjct: 452 QEMGLEAGPTVWGALLYACYLHG 474
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 174/400 (43%), Gaps = 85/400 (21%)
Query: 59 GRIDDARKLFDRMPERDLH--LWGTMINGYIMCGVIKEARKLF-----DG--------PD 103
G + A ++FDRM +RD W ++I+GY G ++A L+ DG P
Sbjct: 141 GYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPR 200
Query: 104 AMK-------------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERN 138
+K DV ALV Y K I +A +F +P ++
Sbjct: 201 VLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKD 260
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSECGRIEDAQWH 192
SWN+M+ GY +G +ALD+FR M P++ +S + + + LS + W
Sbjct: 261 YVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAIS-SVLARVLSFKHGRQLHGWV 319
Query: 193 FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEAL 252
+ E ++ ++ + G++ A +FD+M R+ VSWN +I ++KN L
Sbjct: 320 IRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKN---SNGL 376
Query: 253 ELFERMPERDM-PSWNTLV--------TGFIQNGDLNRAEKLFHEMPQKNVIT-----WT 298
+ FE+M + P T V TG +++G E+LF M ++ I +
Sbjct: 377 KYFEQMHRANAKPDGITFVSVLSLCANTGMVEDG-----ERLFSLMSKEYGIDPKMEHYA 431
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
M+ Y + G+ EEA ++ + + L+ + +L AC L+ I ++ ++
Sbjct: 432 CMVNLYGRAGMMEEA---YSMIVQEMGLEAGPTVWGALLYACY----LHGNTDIGEVAAQ 484
Query: 359 TAFQ---ESTYVVSALINMYSKCGELHIARRIFDEGLLRQ 395
F+ ++ + LI +YSK A+R D +RQ
Sbjct: 485 RLFELEPDNEHNFELLIRIYSK------AKRAEDVERVRQ 518
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 12/218 (5%)
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
F ++L C L ++ G ++H LI + + + S L+ +Y+ CG +A +FD
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 393 LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
R +WN +I+ YA G ++A+ L+ +M E G + + T+ +L AC G V+ G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 453 LQYFDKLLKNRSIQVREDHYA--CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
L+K D Y LV + + G + +A N+ + + +S W +L G
Sbjct: 215 EAIHRDLVKE---GFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVS-WNSMLTG 270
Query: 511 CNVHG----NADIGKLVAKKILKIEPENAGTYSLLSNM 544
HG DI +L+ + IEP+ S+L+ +
Sbjct: 271 YLHHGLLHEALDIFRLMVQN--GIEPDKVAISSVLARV 306
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 223/437 (51%), Gaps = 29/437 (6%)
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERD 200
S + YA G E+AL+LF +M + + + +L+ ++ F +
Sbjct: 14 SLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLA----LKSCAAAFRPVLGGS 69
Query: 201 VKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE 260
V + + + L+ N ++ Y K + A +LF+ +P+
Sbjct: 70 VHAHSVKSNFLS------------------NPFVGCALLDMYGKCLSVSHARKLFDEIPQ 111
Query: 261 RDMPSWNTLVTGFIQNGDLNRAEKLFHEMP-QKNVITWTAMMTGYV--QHGLSEEALKIF 317
R+ WN +++ + G + A +L+ M N ++ A++ G V + G S A++ +
Sbjct: 112 RNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDG-SYRAIEFY 170
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
K+ + KPN T + ++ ACS + ++IH + + + S L+ Y +
Sbjct: 171 RKM-IEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGR 229
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
CG + + +FD + RD+++W+ +I+AYA HG + A+ F +M+ +D+ ++
Sbjct: 230 CGSIVYVQLVFDS--MEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFL 287
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGV 497
+L ACSHAGL +E L YF ++ + ++ +DHY+CLVD+ R GR +EA+ +I+ +
Sbjct: 288 NVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPE 347
Query: 498 DLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANV 557
+ WG LL C +G ++ ++ A+++L +EPEN Y LL +Y SVG+ +EA +
Sbjct: 348 KPTAKTWGALLGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERL 407
Query: 558 RMKMKDKGLKKQPGCSW 574
R+KMK+ G+K PG SW
Sbjct: 408 RLKMKESGVKVSPGSSW 424
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 19/267 (7%)
Query: 61 IDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYV- 119
+ ARKLFD +P+R+ +W MI+ Y CG +KEA +L++ D M + ++ A++ G V
Sbjct: 99 VSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVG 158
Query: 120 ----KLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL----FRRMPERNVV 171
IE ++ + N+ + ++ + G ++ FR + E +
Sbjct: 159 TEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQ 218
Query: 172 SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRN 231
+ +++A CG I Q F+ M +RDV +W++++ A++G + A + F M +
Sbjct: 219 LKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAK 278
Query: 232 VVSWNV----MIKGYAKNRRLDEALELFERMP-----ERDMPSWNTLVTGFIQNGDLNRA 282
V ++ ++K + DEAL F+RM ++ LV + G A
Sbjct: 279 VTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEA 338
Query: 283 EKLFHEMPQKNVI-TWTAMMTGYVQHG 308
K+ MP+K TW A++ +G
Sbjct: 339 YKVIQAMPEKPTAKTWGALLGACRNYG 365
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 130/289 (44%), Gaps = 51/289 (17%)
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
+I+ T ++ Y G E+AL +F ++ + AL + F L +C+ G +H
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGY 413
K+ F + +V AL++MY KC + AR++FDE + QR+ + WN MI+ Y H G
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDE--IPQRNAVVWNAMISHYTHCGK 129
Query: 414 GKEAINLFN---------------------------------KMQELGFQANDVTYVELL 440
KEA+ L+ KM E F+ N +T + L+
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 441 TACSHAG---LVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRL---KEAFNIIEG 494
+ACS G L++E Y + L Q++ LV+ GR G + + F+ +E
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSG----LVEAYGRCGSIVYVQLVFDSME- 244
Query: 495 LGVDLSLSVWGPLLAGCNVHGNAD--IGKLVAKKILKIEPENAGTYSLL 541
D + W L++ +HG+A+ + ++ K+ P++ ++L
Sbjct: 245 ---DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVL 290
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 156/336 (46%), Gaps = 20/336 (5%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER-NVV 171
AL++ Y K + A +LF E+P+RN WN MI Y G+ ++A++L+ M N
Sbjct: 88 ALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNES 147
Query: 172 SWNTIIKAL--SECGRIEDAQWHFNQMRER---DVKSWTTMVDGLAINGRVDDARELFDR 226
S+N IIK L +E G +++ + R ++ + +V + G +E+
Sbjct: 148 SFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHS- 206
Query: 227 MPVRNVVSWNV-----MIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNR 281
RN++ + +++ Y + + +F+ M +RD+ +W++L++ + +GD
Sbjct: 207 YAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAES 266
Query: 282 AEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
A K F EM V I + ++ GL++EAL F ++Q D+ L+ + + ++
Sbjct: 267 ALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLV 326
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ-R 396
S + E ++ Q + + + + AL+ GE+ +A E L+ +
Sbjct: 327 DVLSRVGRFEEAYKVIQAMPE---KPTAKTWGALLGACRNYGEIELAEIAARELLMVEPE 383
Query: 397 DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
+ ++ + Y G +EA L KM+E G + +
Sbjct: 384 NPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVS 419
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 220 bits (560), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/597 (26%), Positives = 262/597 (43%), Gaps = 121/597 (20%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-----DGPD 103
N +I + G +DDAR+LF+ MPERD W +I GV E ++F DG
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 104 AMKD------------------------VVTW---------TALVNGYVKLNQIEEAERL 130
A + VV + T++V+ Y K + +A R+
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 131 FYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWN---------------- 174
F E+ + SWN ++ Y G ++A+ +F +M E NV N
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 175 ---TIIKALS--------------------ECGRIEDAQWHFNQMRERDVKSWTTMVDGL 211
+I A++ +C R+E A+ F+Q R +D+KSWT+ + G
Sbjct: 280 EVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGY 339
Query: 212 AINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER---------- 261
A++G +ARELFD MP RN+VSWN M+ GY DEAL+ M +
Sbjct: 340 AMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLV 399
Query: 262 -----------------------------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ- 291
++ N L+ + + G L A F +M +
Sbjct: 400 WILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSEL 459
Query: 292 KNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ 351
++ ++W A++TG + G SE+AL F +Q + KP+ T T+L C+++ LN G+
Sbjct: 460 RDEVSWNALLTGVARVGRSEQALSFFEGMQVEA--KPSKYTLATLLAGCANIPALNLGKA 517
Query: 352 IHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHH 411
IH + + ++ + A+++MYSKC A +F E RDLI WN +I +
Sbjct: 518 IHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEA--ATRDLILWNSIIRGCCRN 575
Query: 412 GYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH 471
G KE LF ++ G + + VT++ +L AC G VE G QYF + I + +H
Sbjct: 576 GRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEH 635
Query: 472 YACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 528
Y C+++L + G L + + + D + + + C + + +G AK+++
Sbjct: 636 YDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 134/560 (23%), Positives = 223/560 (39%), Gaps = 146/560 (26%)
Query: 72 PERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLF 131
P + L I Y CG + +AR+LF+
Sbjct: 92 PLPPIFLLNRAIEAYGKCGCVDDARELFE------------------------------- 120
Query: 132 YEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNT-IIKALSECGRIEDA- 189
EMPER+ SWN +I A+NG +++ +FRRM V + T L CG I D
Sbjct: 121 -EMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLR 179
Query: 190 ---QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYA 243
Q H ++ +V T++VD + DAR +FD + + VSWNV+++ Y
Sbjct: 180 LLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYL 239
Query: 244 KNRRLDEALELFERMPERDMPSWNTLVTG------------------------------- 272
+ DEA+ +F +M E ++ N V+
Sbjct: 240 EMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTV 299
Query: 273 --------FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKL---- 320
+++ L A ++F + K++ +WT+ M+GY GL+ EA ++F+ +
Sbjct: 300 VSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERN 359
Query: 321 ---------------QADHAL-----------KPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
+ D AL + T V +L CS ++ + G+Q H
Sbjct: 360 IVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHG 419
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
I + + + V +AL++MY KCG L A F + + RD +SWN ++ A G
Sbjct: 420 FIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQ-MSELRDEVSWNALLTGVARVGRS 478
Query: 415 KEAINLFNKMQELGFQANDVTYVELLTACS-----------HAGLVEEGLQYFDKLLKNR 463
++A++ F MQ + + + T LL C+ H L+ +G + D +++
Sbjct: 479 EQALSFFEGMQ-VEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYK-IDVVIRGA 536
Query: 464 SI----QVREDHYACLV-------DL---------CGRAGRLKEAFN---IIEGLGVDLS 500
+ + R YA V DL C R GR KE F ++E GV
Sbjct: 537 MVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPD 596
Query: 501 LSVWGPLLAGCNVHGNADIG 520
+ +L C G+ ++G
Sbjct: 597 HVTFLGILQACIREGHVELG 616
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 165/340 (48%), Gaps = 24/340 (7%)
Query: 128 ERLFYEMPERNVRSWNT-MIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRI 186
E + Y + ER RS ++ + AR Q+ L F +P + N I+A +CG +
Sbjct: 57 EPVSYWLYERLFRSCSSKALVVQARKVQSH--LVTFSPLPP--IFLLNRAIEAYGKCGCV 112
Query: 187 EDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKN- 245
+DA+ F +M ERD SW ++ A NG D+ +F RM V + G K+
Sbjct: 113 DDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSC 172
Query: 246 ---------RRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
R+L A+ + D+ + ++V + + ++ A ++F E+ + ++
Sbjct: 173 GLILDLRLLRQLHCAVVKYGYSGNVDLET--SIVDVYGKCRVMSDARRVFDEIVNPSDVS 230
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
W ++ Y++ G ++EA+ +F K+ + ++P T +V+ ACS L G+ IH +
Sbjct: 231 WNVIVRRYLEMGFNDEAVVMFFKM-LELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIA 289
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
K + T V +++ +MY KC L ARR+FD+ R +DL SW ++ YA G +E
Sbjct: 290 VKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQ--TRSKDLKSWTSAMSGYAMSGLTRE 347
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYF 456
A LF+ M E N V++ +L HA +E L +
Sbjct: 348 ARELFDLMPE----RNIVSWNAMLGGYVHAHEWDEALDFL 383
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 25/308 (8%)
Query: 45 MKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
+K +++S G +AR+LFD MPER++ W M+ GY+ EA D
Sbjct: 329 LKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEA---LDFLTL 385
Query: 105 MK------DVVTWTALVN---GYVKLNQIEEAERLFYEMP-ERNVRSWNTMIDGYARNGQ 154
M+ D VT ++N G + ++A Y + NV N ++D Y + G
Sbjct: 386 MRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGT 445
Query: 155 TEKALDLFRRMPE-RNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAI 213
+ A FR+M E R+ VSWN ++ ++ GR E A F M+ S T+ LA
Sbjct: 446 LQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAG 505
Query: 214 NGRVD--DARELFDRMPVRNVVSWNVMIKG-----YAKNRRLDEALELFERMPERDMPSW 266
+ + + +R+ +V+I+G Y+K R D A+E+F+ RD+ W
Sbjct: 506 CANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILW 565
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQA 322
N+++ G +NG +LF + + V +T+ ++ ++ G E + F+ +
Sbjct: 566 NSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMST 625
Query: 323 DHALKPNT 330
+ + P
Sbjct: 626 KYHISPQV 633
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 219 bits (557), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 185/308 (60%), Gaps = 5/308 (1%)
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
+T + + G+ A K+F E P++ + +W A++ G G + EA+++F ++ L+P
Sbjct: 158 FITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRS-GLEP 216
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLI--SKTAFQESTYVVSALINMYSKCGELHIARR 386
+ T V+V +C L L+ Q+H+ + +KT + ++++LI+MY KCG + +A
Sbjct: 217 DDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASH 276
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHA 446
IF+E +RQR+++SW+ MI YA +G EA+ F +M+E G + N +T+V +L+AC H
Sbjct: 277 IFEE--MRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHG 334
Query: 447 GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGP 506
GLVEEG YF + ++ HY C+VDL R G+LKEA ++E + + ++ VWG
Sbjct: 335 GLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGC 394
Query: 507 LLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
L+ GC G+ ++ + VA ++++EP N G Y +L+N+YA G WK+ VR MK K +
Sbjct: 395 LMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKV 454
Query: 567 KKQPGCSW 574
K P S+
Sbjct: 455 AKIPAYSY 462
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 50/243 (20%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-------PDA 104
I+ C+ G ++ARK+FD PER L W +I G G EA ++F PD
Sbjct: 159 ITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDD 218
Query: 105 M---------------------------------KDVVTWTALVNGYVKLNQIEEAERLF 131
D++ +L++ Y K +++ A +F
Sbjct: 219 FTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIF 278
Query: 132 YEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIE 187
EM +RNV SW++MI GYA NG T +AL+ FR+M E V +++ ++ A G +E
Sbjct: 279 EEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHGGLVE 338
Query: 188 DAQWHFNQMR-----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMIKG 241
+ + +F M+ E + + +VD L+ +G++ +A+++ + MP++ NV+ W ++ G
Sbjct: 339 EGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMGG 398
Query: 242 YAK 244
K
Sbjct: 399 CEK 401
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 123/283 (43%), Gaps = 40/283 (14%)
Query: 112 TALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV 171
+ + Y K + E A ++F E PER + SWN +I G G+ +A+++F M +
Sbjct: 156 SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE 215
Query: 172 SWN-TIIKALSECGRIEDAQWHFNQMR---------ERDVKSWTTMVDGLAINGRVDDAR 221
+ T++ + CG + D F + + D+ +++D GR+D A
Sbjct: 216 PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLAS 275
Query: 222 ELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNR 281
+F+ M RNVVSW+ MI GYA N EALE F +M E
Sbjct: 276 HIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMRE--------------------- 314
Query: 282 AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACS 341
F P K IT+ +++ V GL EE F ++++ L+P + ++ S
Sbjct: 315 ----FGVRPNK--ITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLS 368
Query: 342 DLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIA 384
L E +++ + + + + V L+ K G++ +A
Sbjct: 369 RDGQLKEAKKV---VEEMPMKPNVMVWGCLMGGCEKFGDVEMA 408
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 115/244 (47%), Gaps = 10/244 (4%)
Query: 276 NGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVT 335
+GD+ R+ ++ + P W +M Y++H +A++++ + L P+ +
Sbjct: 67 HGDIFRS-RILDQYPI--AFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVL-PDRYSLPI 122
Query: 336 VLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ 395
V+ A + G+++H + + F + S I +Y K GE AR++FDE +
Sbjct: 123 VIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDEN--PE 180
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQY 455
R L SWN +I H G EA+ +F M+ G + +D T V + +C G + Q
Sbjct: 181 RKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQL 240
Query: 456 FDKLLKNRSIQVRED--HYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNV 513
+L+ ++ + + D L+D+ G+ GR+ A +I E + +S W ++ G
Sbjct: 241 HKCVLQAKT-EEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVS-WSSMIVGYAA 298
Query: 514 HGNA 517
+GN
Sbjct: 299 NGNT 302
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAM--- 105
N+ I + GR+D A +F+ M +R++ W +MI GY G EA + F
Sbjct: 259 NSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVR 318
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMP-----ERNVRSWNTMIDGYARNGQTEKALD 160
+ +T+ +++ V +EE + F M E + + ++D +R+GQ ++A
Sbjct: 319 PNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKK 378
Query: 161 LFRRMPER-NVVSWNTIIKALSECGRIEDAQW 191
+ MP + NV+ W ++ + G +E A+W
Sbjct: 379 VVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEW 410
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 217 bits (553), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 140/507 (27%), Positives = 261/507 (51%), Gaps = 63/507 (12%)
Query: 124 IEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIKA 179
I A +F + N+ +NTMI GY+ + + E+A +F ++ + + S+ T +K+
Sbjct: 75 IRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKS 134
Query: 180 LSE--CGRIEDAQWHFNQMRE-----RDVKSWTTMVDGLAINGRVDDARELFDRMPVR-N 231
S C I + H +R D+++ ++ + G++ DAR++FD MP +
Sbjct: 135 CSRELCVSIGEG-LHGIALRSGFMVFTDLRN--ALIHFYCVCGKISDARKVFDEMPQSVD 191
Query: 232 VVSWNVMIKGYAKNRRLDEALELFERMPER------------------------------ 261
V+++ ++ GY + + AL+LF M +
Sbjct: 192 AVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHV 251
Query: 262 ---------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE 312
D+ L+ + + G ++ A ++F +K+V+TW M+ Y + GL EE
Sbjct: 252 LCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI 372
+ + +++ + +KPN+ TFV +L +C+ G+ + L+ + + +AL+
Sbjct: 312 CVWLLRQMKYEK-MKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALV 370
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE--LGFQ 430
+MY+K G L A IF+ ++ +D+ SW MI+ Y HG +EA+ LFNKM+E +
Sbjct: 371 DMYAKVGLLEKAVEIFNR--MKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVR 428
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFN 490
N++T++ +L ACSH GLV EG++ F ++++ S + +HY C+VDL GRAG+L+EA+
Sbjct: 429 PNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYE 488
Query: 491 IIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGK 550
+I L + + W LLA C V+GNAD+G+ V ++ ++ + LL+ +A G
Sbjct: 489 LIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN 548
Query: 551 WKEAANVRMKMKDKGLKKQPGCSWVEV 577
+++ + + +KG +K+ G S +E+
Sbjct: 549 PEKSLDNEL---NKG-RKEAGYSAIEI 571
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 170/400 (42%), Gaps = 81/400 (20%)
Query: 78 LWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER 137
L +I+ Y +CG I +ARK+FD D VT++ L+NGY+++++ A LF M +
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKS 221
Query: 138 ----NVRSW-----------------------------------NTMIDGYARNGQTEKA 158
NV + +I Y + G A
Sbjct: 222 EVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSA 281
Query: 159 LDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVD 218
+F ++VV+WN +I ++ G +E+ W QM+ +K ++ GL +
Sbjct: 282 RRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYS 341
Query: 219 DA----RELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLV 270
+A R + D + + + ++ YAK L++A+E+F RM ++D+ SW ++
Sbjct: 342 EAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMI 401
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHA-LKPN 329
+G+ +G L+ EA+ +FNK++ ++ ++PN
Sbjct: 402 SGYGAHG-------------------------------LAREAVTLFNKMEEENCKVRPN 430
Query: 330 TGTFVTVLGACSDLAGLNEG-QQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
TF+ VL ACS + EG + +++ +F ++++ + G+L A +
Sbjct: 431 EITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELI 490
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELG 428
L D +W ++AA +G ++ ++ E+G
Sbjct: 491 -RNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMG 529
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 137/340 (40%), Gaps = 75/340 (22%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER-DLHLWGTMINGYIMCGVIKEARKLF-------- 99
N I C G+I DARK+FD MP+ D + T++NGY+ A LF
Sbjct: 164 NALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEV 223
Query: 100 --------------------DGPDAMK----------DVVTWTALVNGYVKLNQIEEAER 129
G ++ D+ TAL+ Y K I A R
Sbjct: 224 VVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARR 283
Query: 130 LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP-ERNVVSWNTIIKALSECGRIED 188
+F ++V +WN MID YA+ G E+ + L R+M E+ + +T + LS C E
Sbjct: 284 IFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEA 343
Query: 189 A---QWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKG 241
A + + + E D T +VD A G ++ A E+F+RM ++V SW MI G
Sbjct: 344 AFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISG 403
Query: 242 YAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMM 301
Y + EA+ LF +M E + + N IT+ ++
Sbjct: 404 YGAHGLAREAVTLFNKMEEENCK-------------------------VRPNEITFLVVL 438
Query: 302 TGYVQHGLSEEALKIFNKLQADHALKPNT---GTFVTVLG 338
GL E ++ F ++ ++ P G V +LG
Sbjct: 439 NACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLG 478
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 149/327 (45%), Gaps = 42/327 (12%)
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
D+ A +F + N+ + M+ GY E A +FN+L+A L + +F+T L
Sbjct: 74 DIRYASSIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRA-KGLTLDRFSFITTL 132
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRD 397
+CS ++ G+ +H + ++ F T + +ALI+ Y CG++ AR++FDE + + D
Sbjct: 133 KSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDE-MPQSVD 191
Query: 398 LISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACS-----------HA 446
++++ ++ Y A++LF M++ N T + L+A S H
Sbjct: 192 AVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHV 251
Query: 447 GLVEEGLQYFDKLL--------------KNRSI---QVRED--HYACLVDLCGRAGRLKE 487
++ GL L+ R I +R+D + C++D + G L+E
Sbjct: 252 LCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEE 311
Query: 488 AFNIIEGLGVDL---SLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLS-- 542
++ + + + S + LL+ C A +G+ VA +E E ++L
Sbjct: 312 CVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD---LLEEERIALDAILGTA 368
Query: 543 --NMYASVGKWKEAANVRMKMKDKGLK 567
+MYA VG ++A + +MKDK +K
Sbjct: 369 LVDMYAKVGLLEKAVEIFNRMKDKDVK 395
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPD-----AMKDVVTWTA 113
G ++ A ++F+RM ++D+ W MI+GY G+ +EA LF+ + + +T+
Sbjct: 377 GLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLV 436
Query: 114 LVNGYVKLNQIEEAERLFYEMPER-----NVRSWNTMIDGYARNGQTEKALDLFRRMP-E 167
++N + E R F M E V + ++D R GQ E+A +L R +P
Sbjct: 437 VLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPIT 496
Query: 168 RNVVSWNTIIKA 179
+ +W ++ A
Sbjct: 497 SDSTAWRALLAA 508
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 195/357 (54%), Gaps = 6/357 (1%)
Query: 236 NVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI 295
N ++ Y LD A +LF +P+RD+ SWN+++ G ++NGD+ A KLF EMP KN+I
Sbjct: 157 NSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNII 216
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
+W M++ Y+ ++ +F ++ + N T V +L AC A L EG+ +H
Sbjct: 217 SWNIMISAYLGANNPGVSISLFREM-VRAGFQGNESTLVLLLNACGRSARLKEGRSVHAS 275
Query: 356 ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK 415
+ +T S + +ALI+MY KC E+ +ARRIFD L R+ ++WN MI A+ HG +
Sbjct: 276 LIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDS--LSIRNKVTWNVMILAHCLHGRPE 333
Query: 416 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACL 475
+ LF M + ++VT+V +L C+ AGLV +G Y+ ++ I+ H C+
Sbjct: 334 GGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCM 393
Query: 476 VDLCGRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP 532
+L AG +EA ++ L V + W LL+ GN +G+ +AK +++ +P
Sbjct: 394 ANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDP 453
Query: 533 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDK 589
N Y LL N+Y+ G+W++ VR +K++ + + PGC V++ V +G K
Sbjct: 454 LNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGLRLGCK 510
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 173/399 (43%), Gaps = 31/399 (7%)
Query: 8 SFILMHAPKLKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKL 67
++++ +PK F I + F+ T S + K C ++C I
Sbjct: 92 AYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHG--- 148
Query: 68 FDRMPERDLHLWGTMINGYIMCGVIKEARKLF-DGPDAMKDVVTWTALVNGYVKLNQIEE 126
++ L + ++++ Y CG + A+KLF + P +D+V+W +++ G V+ +
Sbjct: 149 ----CDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPK--RDIVSWNSIIAGMVRNGDVLA 202
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV-SWNTIIKALSECGR 185
A +LF EMP++N+ SWN MI Y ++ LFR M + +T++ L+ CGR
Sbjct: 203 AHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGR 262
Query: 186 I----EDAQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVM 238
E H + +R V T ++D V AR +FD + +RN V+WNVM
Sbjct: 263 SARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVM 322
Query: 239 IKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV 294
I + + R + LELFE M D ++ ++ G + G +++ + + M +
Sbjct: 323 ILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQ 382
Query: 295 I------TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
I W M Y G EEA + L D + P + + +L +
Sbjct: 383 IKPNFGHQW-CMANLYSSAGFPEEAEEALKNL-PDEDVTPESTKWANLLSSSRFTGNPTL 440
Query: 349 GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
G+ I + + +T Y L+N+YS G R+
Sbjct: 441 GESIAKSLIETDPLNYKY-YHLLMNIYSVTGRWEDVNRV 478
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 102/225 (45%), Gaps = 37/225 (16%)
Query: 328 PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI 387
P++ TFV+++ ++ G+ H K + V ++L++MY+ CG L +A+++
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 388 FDE--------------GLLRQRD---------------LISWNGMIAAYAHHGYGKEAI 418
F E G++R D +ISWN MI+AY +I
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLK---NRSIQVREDHYACL 475
+LF +M GFQ N+ T V LL AC + ++EG L++ N S+ + L
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVID----TAL 291
Query: 476 VDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIG 520
+D+ G+ + A I + L + ++ W ++ +HG + G
Sbjct: 292 IDMYGKCKEVGLARRIFDSLSIRNKVT-WNVMILAHCLHGRPEGG 335
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 133/436 (30%), Positives = 231/436 (52%), Gaps = 29/436 (6%)
Query: 142 WNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDV 201
+NT+I Y G+ + +L LF M +V N +L I+ A F
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSL-----IKAACSSF-------- 100
Query: 202 KSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER 261
++ G+A++G+ L+D + V + Y + L+ + ++F+ +
Sbjct: 101 ----SVSYGVALHGQALKRGFLWDPFVQTSFVRF------YGEVGDLESSRKMFDDILNP 150
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKL- 320
+ + N+L+ +NG+++ A + F MP +V++WT ++ G+ + GL +AL +F ++
Sbjct: 151 CVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMI 210
Query: 321 QADHA-LKPNTGTFVTVLGACS--DLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
Q + A + PN TFV+VL +C+ D G+ G+QIH + +T + +AL++MY K
Sbjct: 211 QNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGK 270
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
G+L +A IFD+ +R + + +WN +I+A A +G K+A+ +F M+ N +T +
Sbjct: 271 AGDLEMALTIFDQ--IRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLL 328
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGV 497
+LTAC+ + LV+ G+Q F + I +HY C+VDL GRAG L +A N I+ L
Sbjct: 329 AILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPF 388
Query: 498 DLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANV 557
+ SV G LL C +H N ++G V K+++ ++P++ G Y LS A W EA +
Sbjct: 389 EPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKM 448
Query: 558 RMKMKDKGLKKQPGCS 573
R M + G++K P S
Sbjct: 449 RKAMIEAGIRKIPAYS 464
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 120/252 (47%), Gaps = 20/252 (7%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
D T+ V Y ++ +E + ++F ++ V + N+++D RNG+ + A + F+RMP
Sbjct: 120 DPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMP 179
Query: 167 ERNVVSWNTIIKALSECGRIEDAQWHFNQM--RERDV--KSWTTMVDGLAINGRVDDARE 222
+VVSW T+I S+ G A F +M ER V + T V L+ D
Sbjct: 180 VTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGI 239
Query: 223 LFDRMPVRNVVSWNVMIKG---------YAKNRRLDEALELFERMPERDMPSWNTLVTGF 273
+ V+S +++ Y K L+ AL +F+++ ++ + +WN +++
Sbjct: 240 RLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISAL 299
Query: 274 IQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
NG +A ++F M N IT A++T + L + +++F+ + +++ + P
Sbjct: 300 ASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPT 359
Query: 330 T---GTFVTVLG 338
+ G V ++G
Sbjct: 360 SEHYGCVVDLIG 371
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 113/258 (43%), Gaps = 37/258 (14%)
Query: 292 KNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ 351
K + ++ Y+ G + +L +F + A H ++PN TF +++ A ++ G
Sbjct: 49 KTKCVYNTLIRSYLTTGEYKTSLALFTHMLASH-VQPNNLTFPSLIKAACSSFSVSYGVA 107
Query: 352 IHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL------------------- 392
+H K F +V ++ + Y + G+L +R++FD+ L
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 393 ----------LRQRDLISWNGMIAAYAHHGYGKEAINLFNKM---QELGFQANDVTYVEL 439
+ D++SW +I ++ G +A+ +F +M + N+ T+V +
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 440 LTACSH--AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGV 497
L++C++ G + G Q ++ ++ I + L+D+ G+AG L+ A I + +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVM-SKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIR- 285
Query: 498 DLSLSVWGPLLAGCNVHG 515
D + W +++ +G
Sbjct: 286 DKKVCAWNAIISALASNG 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF- 99
L+ + CN+ + + G +D A + F RMP D+ W T+ING+ G+ +A +F
Sbjct: 148 LNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFG 207
Query: 100 -----DGPDAMKDVVTWTALVNGYVKLNQ--IEEAERLF-YEMPERNV---RSWNTMIDG 148
+ + T+ ++++ +Q I +++ Y M + + ++D
Sbjct: 208 EMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDM 267
Query: 149 YARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SW 204
Y + G E AL +F ++ ++ V +WN II AL+ GR + A F M+ V +
Sbjct: 268 YGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITL 327
Query: 205 TTMVDGLAINGRVDDARELFDRM 227
++ A + VD +LF +
Sbjct: 328 LAILTACARSKLVDLGIQLFSSI 350
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 146/544 (26%), Positives = 251/544 (46%), Gaps = 81/544 (14%)
Query: 118 YVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSWNTII 177
Y K + A +LF ++P++N +WN + G +NG ALDLF MPER+VVSWNT+I
Sbjct: 49 YFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMI 108
Query: 178 KALSECGRIEDAQWHFNQMRERDVKS---------------------------------- 203
L CG E F M+ +++
Sbjct: 109 SGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYN 168
Query: 204 ---WTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE 260
W +++D G D A +F M R+VVSWN +I + + + AL+ F M E
Sbjct: 169 LVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMRE 228
Query: 261 RDMPS----------------------------------WNTLVTG-----FIQNGDLNR 281
++ N++V G F + L+
Sbjct: 229 MEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDD 288
Query: 282 AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACS 341
+ KLF E+ + + + +M+ Y H E+AL++F L +++P+ TF +VL + +
Sbjct: 289 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF-ILAMTQSVRPDKFTFSSVLSSMN 347
Query: 342 DLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISW 401
+ L+ G +H L+ K F T V ++L+ MY K G + +A +F + +DLI W
Sbjct: 348 AVM-LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKT--DGKDLIFW 404
Query: 402 NGMIAAYAHHGYGKEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLL 460
N +I A + E++ +FN++ + + VT + +L AC +AG V EG+Q F +
Sbjct: 405 NTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSME 464
Query: 461 KNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIG 520
K + +HYAC+++L R G + EA +I + + + S +W P+L G+ +
Sbjct: 465 KAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLA 524
Query: 521 KLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNT 580
+ VAK +L+ EP+++ Y +L +Y +W+ + +R M + LK G S + + ++
Sbjct: 525 ETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESS 584
Query: 581 VQVF 584
V F
Sbjct: 585 VFSF 588
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 126/234 (53%), Gaps = 7/234 (2%)
Query: 222 ELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNR 281
+L + VR N ++ Y K+ + AL+LF+ +P+++ +WN + G +NG LN
Sbjct: 29 QLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNN 88
Query: 282 AEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACS 341
A LF EMP+++V++W M++G V G E +++F +Q ++P TF ++L S
Sbjct: 89 ALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQR-WEIRPTEFTF-SILA--S 144
Query: 342 DLAGLNEGQQIH-QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS 400
+ + G+QIH I + + V +++++MY + G A +F + RD++S
Sbjct: 145 LVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLT--MEDRDVVS 202
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
WN +I + + G + A++ F M+E+ Q ++ T +++ CS + +G Q
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQ 256
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 155/587 (26%), Positives = 256/587 (43%), Gaps = 126/587 (21%)
Query: 45 MKDCNTSISRLCQEGRID---DARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF-- 99
M D LC GR+D A ++F+ MP + L W M++ G +KE F
Sbjct: 146 MADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRE 205
Query: 100 -----------------DGPDAMKD-------------------VVTWTALVNGYVKLNQ 123
G +KD + +L++ Y K
Sbjct: 206 LVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGN 265
Query: 124 IEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERN-------------- 169
AER+F + ++ SWN +I A++ KAL LF MPE
Sbjct: 266 THMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGV 325
Query: 170 -------------------------VVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSW 204
+V N +I ++CG +ED++ F+ +R++++ W
Sbjct: 326 SSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCW 385
Query: 205 TTMVDGLAINGRVDDARELFDRM------PVRNVVS------------------------ 234
++ G A N LF +M P S
Sbjct: 386 NALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYE 444
Query: 235 -----WNVMIKGYAKNRRLDEALELFE--RMPERDMPSWNTLVTGFIQNGDLNRAEKLFH 287
+ +++ YAKN+ +++AL L + P +P N + + + G + + KL
Sbjct: 445 DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVP-LNIVAGIYSRRGQYHESVKLIS 503
Query: 288 EMPQKNVITWTAMMTGYVQHGLSEEALKIF-NKLQADHALKPNTGTFVTVLGACSDLAGL 346
+ Q + ++W + + EE +++F + LQ++ ++P+ TFV++L CS L L
Sbjct: 504 TLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN--IRPDKYTFVSILSLCSKLCDL 561
Query: 347 NEGQQIHQLISKTAFQ-ESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMI 405
G IH LI+KT F T+V + LI+MY KCG + ++F+E R+++LI+W +I
Sbjct: 562 TLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEET--REKNLITWTALI 619
Query: 406 AAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSI 465
+ HGYG+EA+ F + LGF+ + V+++ +LTAC H G+V+EG+ F K +K+ +
Sbjct: 620 SCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQK-MKDYGV 678
Query: 466 QVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN 512
+ DHY C VDL R G LKEA ++I + VW L GCN
Sbjct: 679 EPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCN 725
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 200/413 (48%), Gaps = 61/413 (14%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
++ V +++ Y KL ++ A ++F +MPERN S+NT+I GY++ G +KA +F
Sbjct: 46 LQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSE 105
Query: 165 MPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDG------LAINGRVD 218
M + + + L C ++ Q+ +K M D L + GR+D
Sbjct: 106 MRYFGYLPNQSTVSGLLSCASLDVRAG--TQLHGLSLKYGLFMADAFVGTCLLCLYGRLD 163
Query: 219 ---DARELFDRMPVRNVVSWNVM-----------------------------------IK 240
A ++F+ MP +++ +WN M +K
Sbjct: 164 LLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLK 223
Query: 241 GYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
G + + LD + +L ++ ++ N+L++ + + G+ + AE++F + ++++
Sbjct: 224 GVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVS 283
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
W A++ + +ALK+F + +H PN GT+V+VLG S + L+ G+QIH ++
Sbjct: 284 WNAIICATAKSENPLKALKLFVSM-PEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGML 342
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE 416
K + + +ALI+ Y+KCG L +R FD +R ++++ WN +++ YA+ G
Sbjct: 343 IKNGCETGIVLGNALIDFYAKCGNLEDSRLCFD--YIRDKNIVCWNALLSGYANKD-GPI 399
Query: 417 AINLFNKMQELGFQANDVTYVELLTACS-------HAGLVEEGLQYFDKLLKN 462
++LF +M ++GF+ + T+ L +C H+ +V G + D +L +
Sbjct: 400 CLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSS 452
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 143/654 (21%), Positives = 259/654 (39%), Gaps = 132/654 (20%)
Query: 36 TSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEA 95
T S L + CN IS + G + A K+FD+MPER+ + T+I GY G + +A
Sbjct: 40 TLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKA 99
Query: 96 RKLFDG-------PDA------------------------------MKDVVTWTALVNGY 118
+F P+ M D T L+ Y
Sbjct: 100 WGVFSEMRYFGYLPNQSTVSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLY 159
Query: 119 VKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTII 177
+L+ +E AE++F +MP +++ +WN M+ G ++ + FR + ++ ++ +
Sbjct: 160 GRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFL 219
Query: 178 KALSECGRIED----AQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR 230
L ++D Q H + + + ++ +++ G A +F
Sbjct: 220 GVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSW 279
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPS------------------------- 265
++VSWN +I AK+ +AL+LF MPE
Sbjct: 280 DIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIH 339
Query: 266 --------------WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSE 311
N L+ + + G+L + F + KN++ W A+++GY
Sbjct: 340 GMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GP 398
Query: 312 EALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
L +F ++ +P TF T L +C + E QQ+H +I + ++++ YV+S+L
Sbjct: 399 ICLSLFLQM-LQMGFRPTEYTFSTALKSCC----VTELQQLHSVIVRMGYEDNDYVLSSL 453
Query: 372 I--------------------------------NMYSKCGELHIARRIFDEGLLRQRDLI 399
+ +YS+ G+ H + ++ L Q D +
Sbjct: 454 MRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIST--LEQPDTV 511
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
SWN IAA + Y +E I LF M + + + T+V +L+ CS L + L
Sbjct: 512 SWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSK--LCDLTLGSSIHG 569
Query: 460 LKNRSIQVREDHYAC--LVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNA 517
L ++ D + C L+D+ G+ G ++ + E + +L W L++ +HG
Sbjct: 570 LITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYG 628
Query: 518 D--IGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQ 569
+ K L +P+ S+L+ G KE + KMKD G++ +
Sbjct: 629 QEALEKFKETLSLGFKPDRVSFISILTACRHG-GMVKEGMGLFQKMKDYGVEPE 681
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 7/178 (3%)
Query: 334 VTVLGACSDLAGLNEGQQIHQLISK--TAFQESTYVVSALINMYSKCGELHIARRIFDEG 391
V++L C + +H L + + YV + +I++Y K GE+ +A ++FD+
Sbjct: 16 VSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQ- 74
Query: 392 LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEE 451
+ +R+ +S+N +I Y+ +G +A +F++M+ G+ N T LL+ S V
Sbjct: 75 -MPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRA 131
Query: 452 GLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLA 509
G Q LK CL+ L GR L+ A + E + SL W +++
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFK-SLETWNHMMS 188
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/308 (36%), Positives = 174/308 (56%), Gaps = 10/308 (3%)
Query: 270 VTGFIQN-GDLNRAEKLFHEMPQKNVITWTAMMTGYVQH---GLSEEALKIFNKLQADHA 325
+ GF N G L A LF + + ++ TW ++ Y EE L +F ++Q
Sbjct: 156 LVGFYANCGKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---- 211
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
++PN + V ++ +C++L G H + K + +V ++LI++YSKCG L AR
Sbjct: 212 VRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFAR 271
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
++FDE + QRD+ +N MI A HG+G+E I L+ + G + T+V ++ACSH
Sbjct: 272 KVFDE--MSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSH 329
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWG 505
+GLV+EGLQ F+ + I+ + +HY CLVDL GR+GRL+EA I+ + V + ++W
Sbjct: 330 SGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWR 389
Query: 506 PLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 565
L HG+ + G++ K +L +E EN+G Y LLSN+YA V +W + R MKD
Sbjct: 390 SFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHR 449
Query: 566 LKKQPGCS 573
+ K PG S
Sbjct: 450 VNKSPGIS 457
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 118/287 (41%), Gaps = 67/287 (23%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYARN---GQTEKALDLFRRMPER-------NVVSWNTI 176
A + ++P +V +NT+I N QT A L+ ++ N ++ ++
Sbjct: 59 ALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 177 IKALSECGRIEDAQWH------------FNQMRERDVKSWTTMVDGLAINGRVDDARELF 224
KA DAQWH F + D +V A G++ +AR LF
Sbjct: 119 FKASGF-----DAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLF 173
Query: 225 DRMPVRNVVSWNVMIKGYAKNRRLD---EALELFERMPER-------------------- 261
+R+ ++ +WN ++ YA + +D E L LF RM R
Sbjct: 174 ERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFV 233
Query: 262 ----------------DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYV 305
+ +L+ + + G L+ A K+F EM Q++V + AM+ G
Sbjct: 234 RGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLA 293
Query: 306 QHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
HG +E ++++ L L P++ TFV + ACS ++EG QI
Sbjct: 294 VHGFGQEGIELYKSL-ISQGLVPDSATFVVTISACSHSGLVDEGLQI 339
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 113/252 (44%), Gaps = 19/252 (7%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQI---EEAERLF 131
D + ++ Y CG ++EAR LF+ D+ TW L+ Y +I EE LF
Sbjct: 149 DRFVQAALVGFYANCGKLREARSLFERIRE-PDLATWNTLLAAYANSEEIDSDEEVLLLF 207
Query: 132 YEMPER-NVRSWNTMIDGYARNGQTEKAL----DLFRRMPERNVVSWNTIIKALSECGRI 186
M R N S +I A G+ + + + + N ++I S+CG +
Sbjct: 208 MRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCL 267
Query: 187 EDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVV----SWNVMIKGY 242
A+ F++M +RDV + M+ GLA++G + EL+ + + +V ++ V I
Sbjct: 268 SFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISAC 327
Query: 243 AKNRRLDEALELFERMP-----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK-NVIT 296
+ + +DE L++F M E + + LV ++G L AE+ +MP K N
Sbjct: 328 SHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATL 387
Query: 297 WTAMMTGYVQHG 308
W + + HG
Sbjct: 388 WRSFLGSSQTHG 399
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 104/225 (46%), Gaps = 48/225 (21%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYI--------------------------MCGVI 92
G++ +AR LF+R+ E DL W T++ Y + +I
Sbjct: 164 GKLREARSLFERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVRPNELSLVALI 223
Query: 93 KEA-------RKLFDGPDAMKDVVTW-----TALVNGYVKLNQIEEAERLFYEMPERNVR 140
K R ++ +K+ +T T+L++ Y K + A ++F EM +R+V
Sbjct: 224 KSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVS 283
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQM 196
+N MI G A +G ++ ++L++ + + +V ++ I A S G +++ FN M
Sbjct: 284 CYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSM 343
Query: 197 R-----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR-NVVSW 235
+ E V+ + +VD L +GR+++A E +MPV+ N W
Sbjct: 344 KAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLW 388
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 134/270 (49%), Gaps = 20/270 (7%)
Query: 279 LNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEE---ALKIFNKLQADHA--LKPNTGTF 333
L+ A + ++P +V + +++ V + S + A +++++ + + ++PN T+
Sbjct: 56 LSYALSILRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTY 115
Query: 334 VTVLGACS-DLAGLNEGQQIHQLISK--TAFQESTYVVSALINMYSKCGELHIARRIFDE 390
++ A D G+ +H + K +V +AL+ Y+ CG+L AR +F+
Sbjct: 116 PSLFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFER 175
Query: 391 GLLRQRDLISWNGMIAAYAHH---GYGKEAINLFNKMQELGFQANDVTYVELLTACSHAG 447
+R+ DL +WN ++AAYA+ +E + LF +MQ + N+++ V L+ +C++ G
Sbjct: 176 --IREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKSCANLG 230
Query: 448 LVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPL 507
G+ +LKN ++ + + L+DL + G L A + + + +S + +
Sbjct: 231 EFVRGVWAHVYVLKN-NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMS-QRDVSCYNAM 288
Query: 508 LAGCNVHGNADIGKLVAKKILK--IEPENA 535
+ G VHG G + K ++ + P++A
Sbjct: 289 IRGLAVHGFGQEGIELYKSLISQGLVPDSA 318
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 240/465 (51%), Gaps = 36/465 (7%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PER 168
AL++ Y + +++ A RLF M ER+ SWN +I+ Y + +A L RM E
Sbjct: 224 ALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEA 283
Query: 169 NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK-SWTTMVDGLAINGRVDDAR--ELFD 225
++V+WNTI E G A MR +V+ M++GL + + ++F
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 226 RMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKL 285
+ +R+ + + +D N+L+T + + DL A +
Sbjct: 344 CLVIRSC----------SFSHDIDNVR--------------NSLITMYSRCSDLRHAFIV 379
Query: 286 FHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAG 345
F ++ ++ TW ++++G+ + SEE + ++ PN T ++L + +
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGN 438
Query: 346 LNEGQQIH-QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGM 404
L G++ H ++ + ++++ + ++L++MY+K GE+ A+R+FD +R+RD +++ +
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS--MRKRDKVTYTSL 496
Query: 405 IAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRS 464
I Y G G+ A+ F M G + + VT V +L+ACSH+ LV EG F K+
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG 556
Query: 465 IQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVA 524
I++R +HY+C+VDL RAG L +A +I + + S ++ LL C +HGN +IG+ A
Sbjct: 557 IRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAA 616
Query: 525 KK-ILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 568
K +L+ +PE+ G Y LL++MYA G W + V+ + D G++K
Sbjct: 617 DKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 173/385 (44%), Gaps = 40/385 (10%)
Query: 35 STSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKE 94
S SS + CN IS + G++D AR+LFDRM ERD W +IN Y + E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 95 ARKLFD-----GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT-MIDG 148
A KL D G +A +VTW + G ++ A M NVR + MI+G
Sbjct: 269 AFKLLDRMYLSGVEA--SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 149 YARNGQTE--KALDLFRRMPERNVV-------SWNTIIKALSECGRIEDAQWHFNQMRER 199
K +F + R+ N++I S C + A F Q+
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 200 DVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALE-- 253
+ +W +++ G A N R ++ L M + N ++ ++ +A+ L E
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 254 --LFERMPERD-MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLS 310
+ R +D + WN+LV + ++G++ A+++F M +++ +T+T+++ GY + G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 311 EEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVV-- 368
E AL F + +KP+ T V VL ACS + EG H L +K E + +
Sbjct: 507 EVALAWFKDMDRS-GIKPDHVTMVAVLSACSHSNLVREG---HWLFTK---MEHVFGIRL 559
Query: 369 -----SALINMYSKCGELHIARRIF 388
S ++++Y + G L AR IF
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 148/319 (46%), Gaps = 43/319 (13%)
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
LVT + L+ A+ + + + W ++ Y+++ +E++ ++ ++ + ++
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK-GIRA 182
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
+ T+ +V+ AC+ L G+ +H I ++ + + YV +ALI+MY + G++ +ARR+F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY------------ 436
D + +RD +SWN +I Y EA L ++M G +A+ VT+
Sbjct: 243 DR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
Query: 437 -----------------------VELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA 473
+ L ACSH G ++ G + ++++ S D+
Sbjct: 301 YIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR 360
Query: 474 -CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL--KI 530
L+ + R L+ AF + + + + SLS W +++G + ++ + K++L
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEAN-SLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 531 EPENAGTYSLLSNMYASVG 549
P + S+L ++A VG
Sbjct: 420 HPNHITLASILP-LFARVG 437
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
++ W +LV+ Y K +I A+R+F M +R+ ++ ++IDGY R G+ E AL F+ M
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 168 RNV----VSWNTIIKALSECGRIEDAQWHFNQMRE-----RDVKSWTTMVDGLAINGRVD 218
+ V+ ++ A S + + W F +M ++ ++ MVD G +D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 219 DARELFDRMP 228
AR++F +P
Sbjct: 579 KARDIFHTIP 588
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 81 TMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----E 136
++I Y C ++ A +F +A + TW ++++G+ + EE L EM
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEA-NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 137 RNVRSWNTMIDGYARNGQTEKALD----LFRRMPERN-VVSWNTIIKALSECGRIEDAQW 191
N + +++ +AR G + + + RR ++ ++ WN+++ ++ G I A+
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 192 HFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRR 247
F+ MR+RD ++T+++DG G+ + A F M + V+ ++ + +
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 248 LDEALELFERMPE-----RDMPSWNTLVTGFIQNGDLNRAEKLFHEMP 290
+ E LF +M + ++ +V + + G L++A +FH +P
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 44 AMKDC----NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF 99
+ KDC N+ + + G I A+++FD M +RD + ++I+GY G + A F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 100 ---DGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE-----RNVRSWNTMIDGYAR 151
D D VT A+++ N + E LF +M + ++ M+D Y R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 152 NGQTEKALDLFRRMP-ERNVVSWNTIIKALSECGRIEDAQWHFNQM----RERDVKSWTT 206
G +KA D+F +P E + T++KA G +W +++ + + +
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 207 MVDGLAING 215
+ D A+ G
Sbjct: 634 LADMYAVTG 642
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 55/261 (21%)
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC--SDLAGLNE---GQQIHQLISKT 359
+ HG EA + F+ L+ + + FV A S G NE GQQ+H +
Sbjct: 57 ISHGQLYEAFRTFSLLR----YQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAIN 419
+ + +V L+ YS L A+ I + + + WN +I +Y + +E+++
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP--LPWNVLIGSYIRNKRFQESVS 170
Query: 420 LFNKMQELGFQANDVTYVELLTAC-------------------SHA-------------- 446
++ +M G +A++ TY ++ AC SH
Sbjct: 171 VYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYK 230
Query: 447 --GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSL 501
G V+ + FD++ + ++ + +++ +L EAF +++ + GV+ S+
Sbjct: 231 RFGKVDVARRLFDRMSERDAVS-----WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI 285
Query: 502 SVWGPLLAGCNVHGNADIGKL 522
W + GC GN IG L
Sbjct: 286 VTWNTIAGGCLEAGNY-IGAL 305
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 240/465 (51%), Gaps = 36/465 (7%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM----PER 168
AL++ Y + +++ A RLF M ER+ SWN +I+ Y + +A L RM E
Sbjct: 224 ALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEA 283
Query: 169 NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK-SWTTMVDGLAINGRVDDAR--ELFD 225
++V+WNTI E G A MR +V+ M++GL + + ++F
Sbjct: 284 SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFH 343
Query: 226 RMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKL 285
+ +R+ + + +D N+L+T + + DL A +
Sbjct: 344 CLVIRSC----------SFSHDIDNVR--------------NSLITMYSRCSDLRHAFIV 379
Query: 286 FHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAG 345
F ++ ++ TW ++++G+ + SEE + ++ PN T ++L + +
Sbjct: 380 FQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGN 438
Query: 346 LNEGQQIH-QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGM 404
L G++ H ++ + ++++ + ++L++MY+K GE+ A+R+FD +R+RD +++ +
Sbjct: 439 LQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDS--MRKRDKVTYTSL 496
Query: 405 IAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRS 464
I Y G G+ A+ F M G + + VT V +L+ACSH+ LV EG F K+
Sbjct: 497 IDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFG 556
Query: 465 IQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVA 524
I++R +HY+C+VDL RAG L +A +I + + S ++ LL C +HGN +IG+ A
Sbjct: 557 IRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAA 616
Query: 525 KK-ILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 568
K +L+ +PE+ G Y LL++MYA G W + V+ + D G++K
Sbjct: 617 DKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQK 661
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 173/385 (44%), Gaps = 40/385 (10%)
Query: 35 STSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKE 94
S SS + CN IS + G++D AR+LFDRM ERD W +IN Y + E
Sbjct: 209 SIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGE 268
Query: 95 ARKLFD-----GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT-MIDG 148
A KL D G +A +VTW + G ++ A M NVR + MI+G
Sbjct: 269 AFKLLDRMYLSGVEA--SIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMING 326
Query: 149 YARNGQTE--KALDLFRRMPERNVV-------SWNTIIKALSECGRIEDAQWHFNQMRER 199
K +F + R+ N++I S C + A F Q+
Sbjct: 327 LKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEAN 386
Query: 200 DVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALE-- 253
+ +W +++ G A N R ++ L M + N ++ ++ +A+ L E
Sbjct: 387 SLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFH 446
Query: 254 --LFERMPERD-MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLS 310
+ R +D + WN+LV + ++G++ A+++F M +++ +T+T+++ GY + G
Sbjct: 447 CYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKG 506
Query: 311 EEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVV-- 368
E AL F + +KP+ T V VL ACS + EG H L +K E + +
Sbjct: 507 EVALAWFKDMDRS-GIKPDHVTMVAVLSACSHSNLVREG---HWLFTK---MEHVFGIRL 559
Query: 369 -----SALINMYSKCGELHIARRIF 388
S ++++Y + G L AR IF
Sbjct: 560 RLEHYSCMVDLYCRAGYLDKARDIF 584
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 148/319 (46%), Gaps = 43/319 (13%)
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
LVT + L+ A+ + + + W ++ Y+++ +E++ ++ ++ + ++
Sbjct: 124 LVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSK-GIRA 182
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
+ T+ +V+ AC+ L G+ +H I ++ + + YV +ALI+MY + G++ +ARR+F
Sbjct: 183 DEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLF 242
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY------------ 436
D + +RD +SWN +I Y EA L ++M G +A+ VT+
Sbjct: 243 DR--MSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGN 300
Query: 437 -----------------------VELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA 473
+ L ACSH G ++ G + ++++ S D+
Sbjct: 301 YIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVR 360
Query: 474 -CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL--KI 530
L+ + R L+ AF + + + + SLS W +++G + ++ + K++L
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEAN-SLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 531 EPENAGTYSLLSNMYASVG 549
P + S+L ++A VG
Sbjct: 420 HPNHITLASILP-LFARVG 437
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
++ W +LV+ Y K +I A+R+F M +R+ ++ ++IDGY R G+ E AL F+ M
Sbjct: 459 LILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDR 518
Query: 168 RNV----VSWNTIIKALSECGRIEDAQWHFNQMRE-----RDVKSWTTMVDGLAINGRVD 218
+ V+ ++ A S + + W F +M ++ ++ MVD G +D
Sbjct: 519 SGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLD 578
Query: 219 DARELFDRMP 228
AR++F +P
Sbjct: 579 KARDIFHTIP 588
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 107/228 (46%), Gaps = 19/228 (8%)
Query: 81 TMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----E 136
++I Y C ++ A +F +A + TW ++++G+ + EE L EM
Sbjct: 362 SLITMYSRCSDLRHAFIVFQQVEA-NSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 137 RNVRSWNTMIDGYARNGQTEKALD----LFRRMPERN-VVSWNTIIKALSECGRIEDAQW 191
N + +++ +AR G + + + RR ++ ++ WN+++ ++ G I A+
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 192 HFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRR 247
F+ MR+RD ++T+++DG G+ + A F M + V+ ++ + +
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 248 LDEALELFERMPE-----RDMPSWNTLVTGFIQNGDLNRAEKLFHEMP 290
+ E LF +M + ++ +V + + G L++A +FH +P
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIP 588
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 17/189 (8%)
Query: 44 AMKDC----NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLF 99
+ KDC N+ + + G I A+++FD M +RD + ++I+GY G + A F
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 100 ---DGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE-----RNVRSWNTMIDGYAR 151
D D VT A+++ N + E LF +M + ++ M+D Y R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 152 NGQTEKALDLFRRMP-ERNVVSWNTIIKALSECGRIEDAQWHFNQM----RERDVKSWTT 206
G +KA D+F +P E + T++KA G +W +++ + + +
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYML 633
Query: 207 MVDGLAING 215
+ D A+ G
Sbjct: 634 LADMYAVTG 642
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 107/261 (40%), Gaps = 55/261 (21%)
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC--SDLAGLNE---GQQIHQLISKT 359
+ HG EA + F+ L+ + + FV A S G NE GQQ+H +
Sbjct: 57 ISHGQLYEAFRTFSLLR----YQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISS 112
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAIN 419
+ + +V L+ YS L A+ I + + + WN +I +Y + +E+++
Sbjct: 113 GLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHP--LPWNVLIGSYIRNKRFQESVS 170
Query: 420 LFNKMQELGFQANDVTYVELLTAC-------------------SHA-------------- 446
++ +M G +A++ TY ++ AC SH
Sbjct: 171 VYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYK 230
Query: 447 --GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSL 501
G V+ + FD++ + ++ + +++ +L EAF +++ + GV+ S+
Sbjct: 231 RFGKVDVARRLFDRMSERDAVS-----WNAIINCYTSEEKLGEAFKLLDRMYLSGVEASI 285
Query: 502 SVWGPLLAGCNVHGNADIGKL 522
W + GC GN IG L
Sbjct: 286 VTWNTIAGGCLEAGNY-IGAL 305
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 143/523 (27%), Positives = 248/523 (47%), Gaps = 63/523 (12%)
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM 165
+D T L Y + + A +LF PER+V WN++I YA+ Q L LF ++
Sbjct: 38 RDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQI 97
Query: 166 PERNV----VSWNTIIKALSE--------C--GRIEDAQWHFNQMRERDVKSWTTMVDGL 211
+ ++ + + SE C G + F+Q+ + +V
Sbjct: 98 LRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQI------CGSAIVKAY 151
Query: 212 AINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER-DMPSWNTLV 270
+ G + +A +LF +P ++ WNVMI GY D+ + LF M R P+ T+V
Sbjct: 152 SKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMV 211
Query: 271 ---TGFIQ-----------------NGD------------------LNRAEKLFHEMPQK 292
+G I N D + A +F+ + +
Sbjct: 212 ALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEP 271
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
+++ ++++TGY + G +EAL +F +L+ KP+ VLG+C++L+ G+++
Sbjct: 272 DLVACSSLITGYSRCGNHKEALHLFAELRMS-GKKPDCVLVAIVLGSCAELSDSVSGKEV 330
Query: 353 HQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
H + + + V SALI+MYSKCG L A +F + +++++S+N +I HG
Sbjct: 331 HSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAG--IPEKNIVSFNSLILGLGLHG 388
Query: 413 YGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
+ A F ++ E+G +++T+ LL C H+GL+ +G + F+++ I+ + +HY
Sbjct: 389 FASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHY 448
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP 532
+V L G AG+L+EAF + L + + G LL+ C VH N + ++VA+ I K
Sbjct: 449 VYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIHKNGE 508
Query: 533 ENAGTYS-LLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSW 574
E Y +LSN+YA G+W E +R + + K PG SW
Sbjct: 509 ERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 146/377 (38%), Gaps = 86/377 (22%)
Query: 63 DARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG-------PDAMK--------- 106
ARKLFD PER + LW ++I Y LF PD
Sbjct: 58 SARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFS 117
Query: 107 ----------------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT 144
D + +A+V Y K I EA +LF +P+ ++ WN
Sbjct: 118 ESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNV 177
Query: 145 MIDGYARNGQTEKALDLFRRMPERN---------------------VVSWNT-------- 175
MI GY G +K ++LF M R +V+W+
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKIN 237
Query: 176 ----------IIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFD 225
++ S C I A FN + E D+ + ++++ G + G +A LF
Sbjct: 238 LDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 226 RMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNG 277
+ + + V +++ A+ E+ + E D+ + L+ + + G
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 278 DLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
L A LF +P+KN++++ +++ G HG + A + F ++ + L P+ TF +L
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEI-LEMGLIPDEITFSALL 416
Query: 338 GACSDLAGLNEGQQIHQ 354
C LN+GQ+I +
Sbjct: 417 CTCCHSGLLNKGQEIFE 433
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/406 (24%), Positives = 167/406 (41%), Gaps = 76/406 (18%)
Query: 48 CNTSISR-LCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD------ 100
C ++I + + G I +A KLF +P+ DL LW MI GY CG + LF+
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRG 202
Query: 101 -GPDAMKDV-------------VTWT------------------ALVNGYVKLNQIEEAE 128
P+ V V W+ ALVN Y + I A
Sbjct: 203 HQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASAC 262
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM------PERNVVSWNTIIKALSE 182
+F + E ++ + +++I GY+R G ++AL LF + P+ +V+ L
Sbjct: 263 SVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAI-----VLGS 317
Query: 183 CGRIEDA----QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSW 235
C + D+ + H +R E D+K + ++D + G + A LF +P +N+VS+
Sbjct: 318 CAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSF 377
Query: 236 NVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEM-- 289
N +I G + A E F + E D +++ L+ +G LN+ +++F M
Sbjct: 378 NSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKS 437
Query: 290 -----PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP-NTGTFVTVLGACSDL 343
PQ + + G G EEA + LQ KP ++G +L C
Sbjct: 438 EFGIEPQTEHYVYMVKLMGMA--GKLEEAFEFVMSLQ-----KPIDSGILGALLSCCEVH 490
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFD 389
+ + + + I K + + L N+Y++ G R+ D
Sbjct: 491 ENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRD 536
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 203 bits (516), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 252/499 (50%), Gaps = 52/499 (10%)
Query: 122 NQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLF----RRMPERNVVSWNTII 177
N A+ LF E+P+R++ S N+ + + R+G L LF R P+ + ++ ++
Sbjct: 32 NFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVL 91
Query: 178 KALS-----ECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNV 232
A S E GR A Q E S T ++D + G + D+ +F+ + +++
Sbjct: 92 GACSLLSYPETGRQVHA-LMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDL 150
Query: 233 VSWNVMIKGYAKNRRLDEALELFERM-PERDMPSWNTLVTGFIQNGDLN--RAEKLFHEM 289
VSWN ++ G+ +N + EAL +F M ER S TL + L + K H M
Sbjct: 151 VSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAM 210
Query: 290 P----QKNVITWTAMMTGYVQHGLSEEALKIFNKL--QADHAL----------------- 326
+ V+ TAM++ Y GL EA+K++N L D +
Sbjct: 211 VVVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEA 270
Query: 327 -------KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
+PN + L CSD + L G+QIH + + F + + + L++MY KCG
Sbjct: 271 FLLMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCG 330
Query: 380 ELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE--LGFQANDVTYV 437
++ AR IF + + ++SW MI AYA +G G +A+ +F +M E G N VT++
Sbjct: 331 QIVQARTIFRA--IPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFL 388
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL-- 495
+++AC+HAGLV+EG + F + + + +HY C +D+ +AG +E + ++E +
Sbjct: 389 VVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMME 448
Query: 496 --GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL-KIEPENAGTYSLLSNMYASVGKWK 552
+ ++W +L+ C+++ + G+ VA++++ + PENA Y L+SN YA++GKW
Sbjct: 449 NDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWD 508
Query: 553 EAANVRMKMKDKGLKKQPG 571
+R K+K+KGL K G
Sbjct: 509 VVEELRGKLKNKGLVKTAG 527
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 130/260 (50%), Gaps = 11/260 (4%)
Query: 255 FERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
F R+ + S N ++ A+ LF E+PQ+++ + + ++ +++ G + L
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 315 KIFNKLQADHALKPN--TGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI 372
+F ++ H P+ + TF VLGACS L+ G+Q+H L+ K + T +ALI
Sbjct: 70 ALFLQI---HRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALI 126
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
+MYSK G L + R+F+ + ++DL+SWN +++ + +G GKEA+ +F M + +
Sbjct: 127 DMYSKYGHLVDSVRVFES--VEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEIS 184
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDK-LLKNRSIQVREDHYACLVDLCGRAGRLKEAFNI 491
+ T ++ C+ ++++G Q ++ R + V ++ G + EA +
Sbjct: 185 EFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLG---TAMISFYSSVGLINEAMKV 241
Query: 492 IEGLGVDLSLSVWGPLLAGC 511
L V + L++GC
Sbjct: 242 YNSLNVHTDEVMLNSLISGC 261
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 153/332 (46%), Gaps = 44/332 (13%)
Query: 93 KEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARN 152
++ L A ++ TAL++ Y K + ++ R+F + E+++ SWN ++ G+ RN
Sbjct: 104 RQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRN 163
Query: 153 GQTEKALDLFRRM-PERNVVSWNTIIKALSECGRI----EDAQWH-FNQMRERD-VKSWT 205
G+ ++AL +F M ER +S T+ + C + + Q H + RD V T
Sbjct: 164 GKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGT 223
Query: 206 TMVDGLAINGRVDDARELFDRMPVR-NVVSWNVMIKGYAKNRRLDEALELFERM-PERDM 263
M+ + G +++A ++++ + V + V N +I G +NR EA L R P +
Sbjct: 224 AMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRV 283
Query: 264 PSWN-------------------TLVTGFIQN--------------GDLNRAEKLFHEMP 290
S + L GF+ + G + +A +F +P
Sbjct: 284 LSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIP 343
Query: 291 QKNVITWTAMMTGYVQHGLSEEALKIFNKL-QADHALKPNTGTFVTVLGACSDLAGLNEG 349
K+V++WT+M+ Y +G +AL+IF ++ + + PN+ TF+ V+ AC+ + EG
Sbjct: 344 SKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEG 403
Query: 350 QQIHQLI-SKTAFQESTYVVSALINMYSKCGE 380
++ ++ K T I++ SK GE
Sbjct: 404 KECFGMMKEKYRLVPGTEHYVCFIDILSKAGE 435
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER---- 168
L++ Y K QI +A +F +P ++V SW +MID YA NG KAL++FR M E
Sbjct: 321 GLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGV 380
Query: 169 --NVVSWNTIIKALSECGRIEDAQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDAR 221
N V++ +I A + G +++ + F M+E+ + + +D L+ G ++
Sbjct: 381 LPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIW 440
Query: 222 ELFDRMPVRNVVS-----WNVMIKGYAKNRRLDEALELFERMPERDMP---SWNTLVTGF 273
L +RM + S W ++ + N L + R+ E P S LV+ F
Sbjct: 441 RLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNF 500
Query: 274 IQN-GDLNRAEKLFHEMPQKNVI 295
G + E+L ++ K ++
Sbjct: 501 YAAMGKWDVVEELRGKLKNKGLV 523
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 201 bits (510), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 181/324 (55%), Gaps = 17/324 (5%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHG-----LSEEALKIFNKLQ 321
TL+ + +NGDL A K+F EMP++ +TW AM+ GY H + +A+ +F +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 322 A-DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAF--QESTYVVSALINMYSKC 378
++P T V VL A S L G +H I K F + ++ +AL++MYSKC
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 379 GELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVE 438
G L+ A +F+ L++ +++ +W M A +G G E NL N+M E G + N++T+
Sbjct: 271 GCLNNAFSVFE--LMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTS 328
Query: 439 LLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVD 498
LL+A H GLVEEG++ F + + +HY C+VDL G+AGR++EA+ I + +
Sbjct: 329 LLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIK 388
Query: 499 LSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPEN---AGT----YSLLSNMYASVGKW 551
+ L C+++G +G+ + K +L+IE E+ +G+ Y LSN+ A GKW
Sbjct: 389 PDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKW 448
Query: 552 KEAANVRMKMKDKGLKKQPGCSWV 575
E +R +MK++ +K +PG S+V
Sbjct: 449 VEVEKLRKEMKERRIKTRPGYSFV 472
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 135/323 (41%), Gaps = 59/323 (18%)
Query: 85 GYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT 144
G I+ G++K+ L++ + T L++ Y K + A ++F EMPER +WN
Sbjct: 130 GRIVHGMVKKLGFLYESE------LIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNA 183
Query: 145 MIDGYAR-----NGQTEKALDLFRRMP------ERNVVSWNTIIKALSECGRIEDAQWHF 193
MI GY N KA+ LFRR + ++ A+S+ G +E
Sbjct: 184 MIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVH 243
Query: 194 NQMR------ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRR 247
+ E DV T +VD + G +++A +F+ M V+NV +W M G A N R
Sbjct: 244 GYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGR 303
Query: 248 LDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQH 307
+E L RM E + + N IT+T++++ Y
Sbjct: 304 GNETPNLLNRMAESGI---------------------------KPNEITFTSLLSAYRHI 336
Query: 308 GLSEEALKIFNKLQADHALKP---NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQES 364
GL EE +++F ++ + P + G V +LG + Q+ +Q I +
Sbjct: 337 GLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRI------QEAYQFILAMPIKPD 390
Query: 365 TYVVSALINMYSKCGELHIARRI 387
++ +L N S GE + I
Sbjct: 391 AILLRSLCNACSIYGETVMGEEI 413
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 133/271 (49%), Gaps = 23/271 (8%)
Query: 311 EEALKIF-NKLQADHALKPNTGTFVTVLGACSDLAG---LNEGQQIHQLISKTAF-QEST 365
E++++IF N L N TFV VLGAC+ A L G+ +H ++ K F ES
Sbjct: 88 EDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESE 147
Query: 366 YVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG-----YGKEAINL 420
+ + L++ Y+K G+L AR++FDE + +R ++WN MI Y H ++A+ L
Sbjct: 148 LIGTTLLHFYAKNGDLRYARKVFDE--MPERTSVTWNAMIGGYCSHKDKGNHNARKAMVL 205
Query: 421 FNKMQEL--GFQANDVTYVELLTACSHAGLVEEGL---QYFDKLLKNRSIQVREDHYACL 475
F + G + D T V +L+A S GL+E G Y +KL + V L
Sbjct: 206 FRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIG--TAL 263
Query: 476 VDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPE 533
VD+ + G L AF++ E + V ++ W + G ++G + + ++ + I+P
Sbjct: 264 VDMYSKCGCLNNAFSVFELMKVK-NVFTWTSMATGLALNGRGNETPNLLNRMAESGIKP- 321
Query: 534 NAGTYSLLSNMYASVGKWKEAANVRMKMKDK 564
N T++ L + Y +G +E + MK +
Sbjct: 322 NEITFTSLLSAYRHIGLVEEGIELFKSMKTR 352
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 136/325 (41%), Gaps = 64/325 (19%)
Query: 205 TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAK-----NRRLDEALELFERM- 258
TT++ A NG + AR++FD MP R V+WN MI GY N +A+ LF R
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 259 ------------------------------------------PERDMPSWNTLVTGFIQN 276
PE D+ LV + +
Sbjct: 211 CCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKC 270
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
G LN A +F M KNV TWT+M TG +G E + N++ A+ +KPN TF ++
Sbjct: 271 GCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM-AESGIKPNEITFTSL 329
Query: 337 LGACSDLAGLNEGQQIHQLISKTAFQESTYV--VSALINMYSKCGELHIARRIFDEGLLR 394
L A + + EG ++ + + KT F + + ++++ K G + A + F +
Sbjct: 330 LSAYRHIGLVEEGIELFKSM-KTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQ-FILAMPI 387
Query: 395 QRDLISWNGMIAAYAHHG-------YGKEAINLFNKMQEL-GFQANDVTYVELLTACSHA 446
+ D I + A + +G GK + + + ++L G + D YV L +H
Sbjct: 388 KPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECED--YVALSNVLAHK 445
Query: 447 GLVEEGLQYFDKLLKNRSIQVREDH 471
G E ++ K +K R I+ R +
Sbjct: 446 GKWVE-VEKLRKEMKERRIKTRPGY 469
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 114/309 (36%), Gaps = 71/309 (22%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYI---------------------MCG----- 90
+ G + ARK+FD MPER W MI GY CG
Sbjct: 159 KNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRP 218
Query: 91 -----------------------VIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEA 127
V KL P+ DV TALV+ Y K + A
Sbjct: 219 TDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEV--DVFIGTALVDMYSKCGCLNNA 276
Query: 128 ERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSEC 183
+F M +NV +W +M G A NG+ + +L RM E N +++ +++ A
Sbjct: 277 FSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHI 336
Query: 184 GRIEDAQWHFNQMRER-----DVKSWTTMVDGLAINGRVDDARELFDRMPVR-------- 230
G +E+ F M+ R ++ + +VD L GR+ +A + MP++
Sbjct: 337 GLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRS 396
Query: 231 --NVVS-WNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFH 287
N S + + G + L E E++ + + L G EKL
Sbjct: 397 LCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRK 456
Query: 288 EMPQKNVIT 296
EM ++ + T
Sbjct: 457 EMKERRIKT 465
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 206/401 (51%), Gaps = 44/401 (10%)
Query: 213 INGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM-------------- 258
+N + +F MP RN+ SWN++I ++++ ++++LF RM
Sbjct: 79 LNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLP 138
Query: 259 -------PERDMPSWN-------------------TLVTGFIQNGDLNRAEKLFHEMPQK 292
R+ S + LV ++ G L A KLF +MP +
Sbjct: 139 LILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVR 198
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
+ + +TAM GYVQ G + L +F ++ ++ V++L AC L L G+ +
Sbjct: 199 DSVLYTAMFGGYVQQGEAMLGLAMFREMGYS-GFALDSVVMVSLLMACGQLGALKHGKSV 257
Query: 353 HQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHG 412
H + + +A+ +MY KC L A +F + +RD+ISW+ +I Y G
Sbjct: 258 HGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVN--MSRRDVISWSSLILGYGLDG 315
Query: 413 YGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
+ LF++M + G + N VT++ +L+AC+H GLVE+ YF +L++ +I HY
Sbjct: 316 DVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF-RLMQEYNIVPELKHY 374
Query: 473 ACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEP 532
A + D RAG L+EA +E + V +V G +L+GC V+GN ++G+ VA+++++++P
Sbjct: 375 ASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVGERVARELIQLKP 434
Query: 533 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCS 573
A Y L+ +Y++ G++ EA ++R MK+K + K PGCS
Sbjct: 435 RKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 129/297 (43%), Gaps = 51/297 (17%)
Query: 106 KDVVTWTALVNGYVKLNQI-EEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
+VV + LV Y KLN + + +F+ MP RN+ SWN +I ++R+G K++DLF R
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 165 MPERNVV-----SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAI----NG 215
M + V + I++A S + + S + L I G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPE--------------- 260
++ AR+LFD MPVR+ V + M GY + L +F M
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 261 -----------RDMPSW-------------NTLVTGFIQNGDLNRAEKLFHEMPQKNVIT 296
+ + W N + +++ L+ A +F M +++VI+
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
W++++ GY G + K+F+++ + ++PN TF+ VL AC+ GL E ++
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKE-GIEPNAVTFLGVLSACAH-GGLVEKSWLY 358
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 54/288 (18%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAM------ 105
G++ ARKLFD MP RD L+ M GY+ G +F D++
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLL 242
Query: 106 ------------KDVVTWT-------------ALVNGYVKLNQIEEAERLFYEMPERNVR 140
K V W A+ + YVK + ++ A +F M R+V
Sbjct: 243 MACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVI 302
Query: 141 SWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKALSECGRIEDAQWHFNQM 196
SW+++I GY +G + LF M E N V++ ++ A + G +E + +F M
Sbjct: 303 SWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLM 362
Query: 197 RERDV----KSWTTMVDGLAINGRVDDARELFDRMPVR--NVVSWNVM--IKGYAKNRRL 248
+E ++ K + ++ D ++ G +++A + + MPV+ V V+ K Y N +
Sbjct: 363 QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYG-NVEV 421
Query: 249 DE--ALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV 294
E A EL + P R + TL + G + AE L M +K +
Sbjct: 422 GERVARELIQLKP-RKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQI 468
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 124/437 (28%), Positives = 228/437 (52%), Gaps = 33/437 (7%)
Query: 172 SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRN 231
+WN + + S ++ W +++M+ R +K +++
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKP---------------------NKLTFPF 118
Query: 232 VVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ 291
++ G R++ +E+ + + D+ N L+ + + A K+F EM +
Sbjct: 119 LLKACASFLGLTAGRQIQ--VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTE 176
Query: 292 KNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ 351
+NV++W ++MT V++G + F ++ P+ T V +L AC L+ G+
Sbjct: 177 RNVVSWNSIMTALVENGKLNLVFECFCEMIGKR-FCPDETTMVVLLSACG--GNLSLGKL 233
Query: 352 IHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHH 411
+H + + + + +AL++MY+K G L AR +F+ + +++ +W+ MI A +
Sbjct: 234 VHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFER--MVDKNVWTWSAMIVGLAQY 291
Query: 412 GYGKEAINLFNKM-QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRED 470
G+ +EA+ LF+KM +E + N VT++ +L ACSH GLV++G +YF ++ K I+
Sbjct: 292 GFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMI 351
Query: 471 HYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD---IGKLVAKKI 527
HY +VD+ GRAGRL EA++ I+ + + VW LL+ C++H + D IG+ V K++
Sbjct: 352 HYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRL 411
Query: 528 LKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVG 587
+++EP+ +G +++N +A W EAA VR MK+ +KK G S +E+G + F G
Sbjct: 412 IELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSG 471
Query: 588 DKSHSQSELLGYLLLDL 604
S+ + Y LLDL
Sbjct: 472 YDPRSEYVSI-YELLDL 487
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 151/339 (44%), Gaps = 48/339 (14%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKAL-S 181
A L + +WN + GY+ + +++ ++ M R N +++ ++KA S
Sbjct: 66 ARTLLLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACAS 125
Query: 182 ECGRIEDAQWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVM 238
G Q ++ + DV ++ + DAR++FD M RNVVSWN +
Sbjct: 126 FLGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSI 185
Query: 239 IKGYAKNRRLDEALELF-ERMPERDMPSWNT----------------------------- 268
+ +N +L+ E F E + +R P T
Sbjct: 186 MTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVRELEL 245
Query: 269 -------LVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
LV + ++G L A +F M KNV TW+AM+ G Q+G +EEAL++F+K+
Sbjct: 246 NCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMM 305
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEG-QQIHQLISKTAFQESTYVVSALINMYSKCGE 380
+ +++PN TF+ VL ACS +++G + H++ + A++++ + G
Sbjct: 306 KESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGR 365
Query: 381 LHIARRIFDEGLLRQRDLISWNGMIAAYA-HHGYGKEAI 418
L+ A F + + + D + W +++A + HH E I
Sbjct: 366 LNEAYD-FIKKMPFEPDAVVWRTLLSACSIHHDEDDEGI 403
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 32/257 (12%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM- 165
DV L++ Y + +A ++F EM ERNV SWN+++ NG+ + F M
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 166 PERNVVSWNTIIKALSEC------GRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDD 219
+R T++ LS C G++ +Q ++ E + + T +VD A +G ++
Sbjct: 207 GKRFCPDETTMVVLLSACGGNLSLGKLVHSQVMVREL-ELNCRLGTALVDMYAKSGGLEY 265
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM--PSWNTLV------- 270
AR +F+RM +NV +W+ MI G A+ +EAL+LF +M + P++ T +
Sbjct: 266 ARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACS 325
Query: 271 -TGFIQNGDLNRAEKLFHEMPQKN-----VITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
TG + +G K FHEM + + +I + AM+ + G EA K+
Sbjct: 326 HTGLVDDG-----YKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKM---- 376
Query: 325 ALKPNTGTFVTVLGACS 341
+P+ + T+L ACS
Sbjct: 377 PFEPDAVVWRTLLSACS 393
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 115/231 (49%), Gaps = 20/231 (8%)
Query: 60 RIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAMKDVVTWT 112
+ DARK+FD M ER++ W +++ + G + + F PD VV +
Sbjct: 163 KTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLS 222
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVS 172
A G + L ++ ++ + E+ E N R ++D YA++G E A +F RM ++NV +
Sbjct: 223 A-CGGNLSLGKLVHSQVMVREL-ELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWT 280
Query: 173 WNTIIKALSECGRIEDAQWHFNQ-MRERDVK-SWTTMVDGLAI---NGRVDDARELFDRM 227
W+ +I L++ G E+A F++ M+E V+ ++ T + L G VDD + F M
Sbjct: 281 WSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEM 340
Query: 228 PVRN-----VVSWNVMIKGYAKNRRLDEALELFERMP-ERDMPSWNTLVTG 272
+ ++ + M+ + RL+EA + ++MP E D W TL++
Sbjct: 341 EKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSA 391
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 57 QEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDG----PDAMKDVVTWT 112
+ G ++ AR +F+RM ++++ W MI G G +EA +LF + VT+
Sbjct: 259 KSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFL 318
Query: 113 ALVNGYVKLNQIEEAERLFYEMPERN-----VRSWNTMIDGYARNGQTEKALDLFRRMP- 166
++ +++ + F+EM + + + + M+D R G+ +A D ++MP
Sbjct: 319 GVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPF 378
Query: 167 ERNVVSWNTIIKALS 181
E + V W T++ A S
Sbjct: 379 EPDAVVWRTLLSACS 393
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 197 bits (500), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 143/555 (25%), Positives = 250/555 (45%), Gaps = 85/555 (15%)
Query: 122 NQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM--PERNVVSWNTIIKA 179
+ ++ +LF E+P+R+V SWNT++ + G++ KA DLF M E V T+
Sbjct: 232 SSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTL 291
Query: 180 LSEC-------------GR-------------------------IEDAQWHFNQMRERDV 201
LS C GR ++ + + M +D
Sbjct: 292 LSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDA 351
Query: 202 KSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER 261
++T M+ G VD A E+F + +N +++N ++ G+ +N +AL+LF M +R
Sbjct: 352 VTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR 411
Query: 262 DMPSWNTLVT-------------------GF-----------IQNGDLNR---------A 282
+ + +T GF IQ L+ A
Sbjct: 412 GVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADA 471
Query: 283 EKLFHEMPQK--NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGAC 340
E++F + P + T+++ GY ++GL ++A+ +F++ + L + + +L C
Sbjct: 472 EEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Query: 341 SDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS 400
L G QIH K + + ++LI+MY+KC + A +IF+ +R+ D+IS
Sbjct: 532 GTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNT--MREHDVIS 589
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC--SHAGLVEEGLQYFDK 458
WN +I+ Y G EA+ L+++M E + + +T +++A + + + F
Sbjct: 590 WNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLS 649
Query: 459 LLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNAD 518
+ I+ +HY V + G G L+EA + I + V +SV LL C +H N
Sbjct: 650 MKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTS 709
Query: 519 IGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSWVEVG 578
+ K VAK IL +PE Y L SN+Y++ G W + +R +M+++G +K P SW+
Sbjct: 710 VAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHE 769
Query: 579 NTVQVFVVGDKSHSQ 593
N + F D SH Q
Sbjct: 770 NKIHSFHARDTSHPQ 784
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 122/219 (55%), Gaps = 16/219 (7%)
Query: 255 FERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEAL 314
F ++ E N L++ +++ G A +F + V+++TA+++G+ + L EAL
Sbjct: 106 FLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEAL 165
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
K+F +++ ++PN TFV +L AC ++ + G QIH LI K+ F S +V ++L+++
Sbjct: 166 KVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 375 YSK-----CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL-G 428
Y K C ++ ++FDE + QRD+ SWN ++++ G +A +LF +M + G
Sbjct: 226 YDKDSGSSCDDV---LKLFDE--IPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEG 280
Query: 429 FQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQV 467
F + T LL++C+ + ++ G + L R+I++
Sbjct: 281 FGVDSFTLSTLLSSCTDSSVLLRGRE-----LHGRAIRI 314
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 137/489 (28%), Positives = 223/489 (45%), Gaps = 92/489 (18%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMK-- 106
N IS + G + ARK+FD MPE++ W MI+GY+ G+ EA LF+ D +K
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFE--DYVKHG 178
Query: 107 --------------------------------------DVVTWTALVNGYVKLNQIEEAE 128
+++ ++LV Y + ++ A
Sbjct: 179 IRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSAL 238
Query: 129 RLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECG 184
R F M E++V SW +I +R G KA+ +F M N + +I+KA SE
Sbjct: 239 RAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 185 RIEDA-QWH---FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIK 240
+ Q H +M + DV T+++D A G + D R++FD M RN V+W +I
Sbjct: 299 ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIA 358
Query: 241 GYAKNRRLDEALELFERMPERDMPSWN--------------------------------- 267
+A+ +EA+ LF M R + + N
Sbjct: 359 AHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEK 418
Query: 268 ------TLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
TLV + + G+ A + ++P ++V++WTAM++G G EAL F K
Sbjct: 419 NVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD-FLKEM 477
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
++PN T+ + L AC++ L G+ IH + K + +V SALI+MY+KCG +
Sbjct: 478 IQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFV 537
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
A R+FD + +++L+SW MI YA +G+ +EA+ L +M+ GF+ +D + +L+
Sbjct: 538 SEAFRVFDS--MPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILS 595
Query: 442 ACSHAGLVE 450
C L E
Sbjct: 596 TCGDIELDE 604
Score = 166 bits (419), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 185/361 (51%), Gaps = 47/361 (13%)
Query: 220 ARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWN------------ 267
AR++FD MP +N V+W MI GY K DEA LFE + + N
Sbjct: 136 ARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCS 195
Query: 268 ---------------------------TLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAM 300
+LV + Q G+L A + F M +K+VI+WTA+
Sbjct: 196 RRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAV 255
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
++ + G +A+ +F + +H PN T ++L ACS+ L G+Q+H L+ K
Sbjct: 256 ISACSRKGHGIKAIGMFIGM-LNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 361 FQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINL 420
+ +V ++L++MY+KCGE+ R++FD + R+ ++W +IAA+A G+G+EAI+L
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDG--MSNRNTVTWTSIIAAHAREGFGEEAISL 372
Query: 421 FNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCG 480
F M+ AN++T V +L AC G + G + +++KN SI+ + LV L
Sbjct: 373 FRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKN-SIEKNVYIGSTLVWLYC 431
Query: 481 RAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPENAGTY 538
+ G ++AFN+++ L +S W +++GC+ G+ K++++ +EP N TY
Sbjct: 432 KCGESRDAFNVLQQLPSRDVVS-WTAMISGCSSLGHESEALDFLKEMIQEGVEP-NPFTY 489
Query: 539 S 539
S
Sbjct: 490 S 490
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/453 (24%), Positives = 213/453 (47%), Gaps = 70/453 (15%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLF--------RRM 165
L++ V+L + A ++F MPE+N +W MIDGY + G ++A LF R
Sbjct: 123 LISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFT 182
Query: 166 PER-------------------------------NVVSWNTIIKALSECGRIEDAQWHFN 194
ER N++ ++++ ++CG + A F+
Sbjct: 183 NERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVESSLVYFYAQCGELTSALRAFD 242
Query: 195 QMRERDVKSWTTMVDGLAINGRVDDARELFDRMP----VRNVVSWNVMIKGYAKNRRLDE 250
M E+DV SWT ++ + G A +F M + N + ++K ++ + L
Sbjct: 243 MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRF 302
Query: 251 ALE----LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQ 306
+ + +RM + D+ +L+ + + G+++ K+F M +N +TWT+++ + +
Sbjct: 303 GRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAR 362
Query: 307 HGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTY 366
G EEA+ +F ++ H L N T V++L AC + L G+++H I K + +++ Y
Sbjct: 363 EGFGEEAISLFRIMKRRH-LIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVY 421
Query: 367 VVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE 426
+ S L+ +Y KCGE A + + L RD++SW MI+ + G+ EA++ +M +
Sbjct: 422 IGSTLVWLYCKCGESRDAFNVLQQ--LPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQ 479
Query: 427 LGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQ--VREDHY-------ACLVD 477
G + N TY L AC+++ + LL RSI +++H + L+
Sbjct: 480 EGVEPNPFTYSSALKACANS----------ESLLIGRSIHSIAKKNHALSNVFVGSALIH 529
Query: 478 LCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
+ + G + EAF + + + + +L W ++ G
Sbjct: 530 MYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMG 561
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 131/245 (53%), Gaps = 7/245 (2%)
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
N L++ ++ GDL A K+F MP+KN +TWTAM+ GY+++GL +EA +F H +
Sbjct: 121 NNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDY-VKHGI 179
Query: 327 K-PNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
+ N FV +L CS A G+Q+H + K + V S+L+ Y++CGEL A
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSAL 238
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
R FD ++ ++D+ISW +I+A + G+G +AI +F M F N+ T +L ACS
Sbjct: 239 RAFD--MMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSE 296
Query: 446 AGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWG 505
+ G Q ++K R I+ L+D+ + G + + + +G+ + + W
Sbjct: 297 EKALRFGRQVHSLVVK-RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMS-NRNTVTWT 354
Query: 506 PLLAG 510
++A
Sbjct: 355 SIIAA 359
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 345 GLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGM 404
G+ ++IH + K + Y + LI+ + G+L AR++FD + +++ ++W M
Sbjct: 97 GMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDS--MPEKNTVTWTAM 154
Query: 405 IAAYAHHGYGKEAINLFNKMQELGFQ-ANDVTYVELLTACSHAGLVEEGLQYFDKLLK-N 462
I Y +G EA LF + G + N+ +V LL CS E G Q ++K
Sbjct: 155 IDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVG 214
Query: 463 RSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNV--HGNADIG 520
+ E CG AF+++E + + W +++ C+ HG IG
Sbjct: 215 VGNLIVESSLVYFYAQCGELTSALRAFDMME----EKDVISWTAVISACSRKGHGIKAIG 270
Query: 521 KLVA 524
+
Sbjct: 271 MFIG 274
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 139/520 (26%), Positives = 232/520 (44%), Gaps = 94/520 (18%)
Query: 59 GRIDDARKLFDRMPERDLHLWGTMINGYIMCG---------VIKEARKL----------- 98
G + DA+K+FD +++ W ++ G ++ G E R+L
Sbjct: 160 GSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSN 219
Query: 99 ----FDGPDAMK----------------DVVTWTALVNGYVKLNQIEEAERLFYEMPERN 138
F G A++ V T+LV+ Y K ++ A R+F E+ ER+
Sbjct: 220 VFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD 279
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMPER-----NVVSWNTIIKALSECGRIE-DAQWH 192
+ W MI G A N + +AL LFR M N V TI+ L + ++ + H
Sbjct: 280 IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVH 339
Query: 193 FNQMRERDVKSW----TTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRL 248
+ ++ ++ + ++D G + R +F RN +SW ++ GYA N R
Sbjct: 340 AHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRF 399
Query: 249 DEALELFERMPERDM-PSWNTLVTG------------------------FIQNGDL---- 279
D+AL M + P T+ T F+ N L
Sbjct: 400 DQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSL 459
Query: 280 ----------NRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFN-KLQADHALKP 328
+LF + Q+NV WTAM+ YV++ +++F L + H +P
Sbjct: 460 MVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH--RP 517
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
++ T VL CSDL L G+++H I K F+ +V + +I MY KCG+L A F
Sbjct: 518 DSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSF 577
Query: 389 DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGL 448
D ++ ++W +I AY + ++AIN F +M GF N T+ +L+ CS AG
Sbjct: 578 DAVAVKGS--LTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGF 635
Query: 449 VEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEA 488
V+E ++F+ +L+ ++Q E+HY+ +++L R GR++EA
Sbjct: 636 VDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 19/208 (9%)
Query: 311 EEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSA 370
E AL I + L+ + N TF +L AC L G+Q+H I + + ++ +
Sbjct: 93 EVALTILDYLE-QRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTK 151
Query: 371 LINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGK--EAINLFNKMQELG 428
L++MY+ CG + A+++FDE ++ SWN ++ G + + ++ F +M+ELG
Sbjct: 152 LVHMYTACGSVKDAQKVFDEST--SSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELG 209
Query: 429 FQANDVTYVELLTACSHAGLVEEGLQYFDKLLKN---RSIQVREDHYACLVDL---CGRA 482
N + + + + A + +GL+ +KN S+ ++ LVD+ CG+
Sbjct: 210 VDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTS----LVDMYFKCGKV 265
Query: 483 GRLKEAFNIIEGLGVDLSLSVWGPLLAG 510
G + F+ I V+ + VWG ++AG
Sbjct: 266 GLARRVFDEI----VERDIVVWGAMIAG 289
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 185 bits (469), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/395 (29%), Positives = 207/395 (52%), Gaps = 44/395 (11%)
Query: 114 LVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRM-----PER 168
L++ + + A +F ++ + +WN MI + N + +AL LF M +
Sbjct: 58 LISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQF 117
Query: 169 NVVSWNTIIKALSECGRIE-DAQWHFNQMRE---RDVKSWTTMVDGLAINGRVDDARELF 224
+ ++ +IKA I Q H ++ DV T++D G+ D R++F
Sbjct: 118 DKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVF 177
Query: 225 DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEK 284
D+MP R++VSW M+ G N +LD A +F +MP R++ SW ++T +++N
Sbjct: 178 DKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKN-------- 229
Query: 285 LFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLA 344
P +EA ++F ++Q D +KPN T V +L A + L
Sbjct: 230 ---RRP--------------------DEAFQLFRRMQVDD-VKPNEFTIVNLLQASTQLG 265
Query: 345 GLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGM 404
L+ G+ +H K F ++ +ALI+MYSKCG L AR++FD +++ + L +WN M
Sbjct: 266 SLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFD--VMQGKSLATWNSM 323
Query: 405 IAAYAHHGYGKEAINLFNKMQELG-FQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR 463
I + HG G+EA++LF +M+E + + +T+V +L+AC++ G V++GL+YF ++++
Sbjct: 324 ITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVY 383
Query: 464 SIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVD 498
I +H AC++ L +A +++A N++E + D
Sbjct: 384 GISPIREHNACMIQLLEQALEVEKASNLVESMDSD 418
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 116/230 (50%), Gaps = 14/230 (6%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM 134
D+ T+++ Y CG RK+FD + +V+WT ++ G V +Q++ AE +F +M
Sbjct: 153 DVFFQNTLMDLYFKCGKPDSGRKVFDKMPG-RSIVSWTTMLYGLVSNSQLDSAEIVFNQM 211
Query: 135 PERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSECGRIEDAQ 190
P RNV SW MI Y +N + ++A LFRRM + N + +++A ++ G + +
Sbjct: 212 PMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGR 271
Query: 191 WHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNR 246
W + + D T ++D + G + DAR++FD M +++ +WN MI +
Sbjct: 272 WVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHG 331
Query: 247 RLDEALELFERMP-----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ 291
+EAL LFE M E D ++ +++ G++ + F M Q
Sbjct: 332 CGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQ 381
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 119/253 (47%), Gaps = 39/253 (15%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRR 164
DV L++ Y K + + ++F +MP R++ SW TM+ G N Q + A +F +
Sbjct: 151 FNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQ 210
Query: 165 MPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK-SWTTMVDGLAIN---GRVDDA 220
MP RNVVSW +I A + R ++A F +M+ DVK + T+V+ L + G +
Sbjct: 211 MPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMG 270
Query: 221 RELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQN 276
R + D V + +I Y+K L +A ++F+ M + + +WN
Sbjct: 271 RWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWN--------- 321
Query: 277 GDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTV 336
+M+T HG EEAL +F +++ + +++P+ TFV V
Sbjct: 322 ----------------------SMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGV 359
Query: 337 LGACSDLAGLNEG 349
L AC++ + +G
Sbjct: 360 LSACANTGNVKDG 372
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDV 108
NT + + G+ D RK+FD+MP R + W TM+ G + + A +F+ M++V
Sbjct: 158 NTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQM-PMRNV 216
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER 168
V+WTA++ YVK + +EA +LF M +V+ I + +L + R + +
Sbjct: 217 VSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDY 276
Query: 169 --------NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDA 220
+ +I S+CG ++DA+ F+ M+ + + +W +M+ L ++G ++A
Sbjct: 277 AHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 221 RELFDRMPVR-----NVVSWNVMIKGYAKNRRLDEALELFERM 258
LF+ M + +++ ++ A + + L F RM
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRM 379
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 149/624 (23%), Positives = 273/624 (43%), Gaps = 100/624 (16%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMING----------------YIMCGVI 92
N I L + G + A + FD M RD+ + +I+G + CG+
Sbjct: 50 NRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLR 109
Query: 93 KEAR-----------KLF--DGPDAMKDVVTW---------TALVNGYVKLNQIEEAERL 130
+ A +LF +G V++ +ALV Y L ++ A +L
Sbjct: 110 ESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKL 169
Query: 131 FYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER---------------------- 168
F EM +RN+ N ++ + + G++++ +++ RM
Sbjct: 170 FDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLV 229
Query: 169 ------------------NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDG 210
N+ N ++ S CG + + FN + E+DV SW ++V
Sbjct: 230 YEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSV 289
Query: 211 LAINGRVDDARELFDRM-------PVRNVVSWNVMIKGYAKNRRLDEALELFERMPER-- 261
A G V D+ +LF +M +R +S+ + ++N + ++ + +
Sbjct: 290 CADYGSVLDSLDLFSKMQFWGKRPSIRPFMSF---LNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 262 DMPSW---NTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFN 318
D+ S + L+ + + + + L+ +P N+ ++MT + G++++ +++F
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFG 406
Query: 319 KLQADHALKPNTGTFVTVLGACSDLA---GLNEGQQIHQLISKTAFQESTYVVSALINMY 375
L D + T TVL A S L+ L+ +H K+ + V +LI+ Y
Sbjct: 407 -LMIDEGTGIDEVTLSTVLKALS-LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAY 464
Query: 376 SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
+K G+ ++R++FDE L ++ +I YA +G G + + + +M + ++VT
Sbjct: 465 TKSGQNEVSRKVFDE--LDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVT 522
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
+ +L+ CSH+GLVEEG FD L I YAC+VDL GRAG +++A ++
Sbjct: 523 ILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQA 582
Query: 496 GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAA 555
D W LL C +H N IG+ A+ ++ +EPEN Y +S Y +G ++ +
Sbjct: 583 RGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISR 642
Query: 556 NVRMKMKDKGLKKQPGCSWVEVGN 579
+R + L ++ G S V V N
Sbjct: 643 QIREIAASRELMREIGYSSVVVKN 666
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 3/209 (1%)
Query: 254 LFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEA 313
E P + + N + I++G+L A + F EM ++V+T+ +++G ++G S A
Sbjct: 37 FLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRA 96
Query: 314 LKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALIN 373
++++ ++ L+ + TF +VL CSD EG Q+H + F + +V SAL+
Sbjct: 97 IELYAEM-VSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVG 155
Query: 374 MYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
+Y+ + +A ++FDE L R+L N ++ + G K ++ +M+ G N
Sbjct: 156 LYACLRLVDVALKLFDEML--DRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG 213
Query: 434 VTYVELLTACSHAGLVEEGLQYFDKLLKN 462
+TY ++ CSH LV EG Q ++K+
Sbjct: 214 LTYCYMIRGCSHDRLVYEGKQLHSLVVKS 242
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 217/441 (49%), Gaps = 61/441 (13%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHL----WGTMINGYIMCGVIKEARKLFDGPDA 104
NT I+ LC EGR+ +A L ++M + LH+ +GT++NG G K A L +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEK 157
DVV ++A+++ K +A+ LF EM E+ NV ++N MIDG+ G+
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
A L R M ER +V+++N +I A + G++ +A+ ++M R D ++ +M+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 210 GLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM----PS 265
G + R DDA+ +FD M +VV++N +I Y + +R+DE ++L + R + +
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQ 321
+NTL+ GF + +LN A+ LF EM V IT ++ G+ ++ EEAL++F +Q
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
DL + IH + + E+ + +L +
Sbjct: 530 MSKI----------------DLDTVAYNIIIHGMCKGSKVDEAWDLFCSL--------PI 565
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
H G+ + D+ ++N MI+ + +A LF+KM++ G + ++ TY L+
Sbjct: 566 H--------GV--EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 442 ACSHAGLVEEGLQYFDKLLKN 462
C AG +++ ++ ++ N
Sbjct: 616 GCLKAGEIDKSIELISEMRSN 636
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 162/359 (45%), Gaps = 46/359 (12%)
Query: 135 PERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQ 190
P N +I + R + + A+ L+R+M R N+ S+N +IK +C ++ +
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL 161
Query: 191 WHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRM------------------- 227
F ++ + DV ++ T++ GL + R+ +A LF M
Sbjct: 162 STFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIG 221
Query: 228 --PVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNR 281
PV V+++N +I G R+ EA L +M + D+ ++ T+V G + GD
Sbjct: 222 LTPV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 282 AEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
A L +M + +V+ ++A++ + G +A +F+++ + + PN T+ ++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMI 338
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ-- 395
++ Q++ + + + +ALI+ K G+L A ++ DE L R
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
D +++N MI + H +A ++F+ M + VT+ ++ A V+EG+Q
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQ 453
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 38/310 (12%)
Query: 186 IEDAQWHFNQMRERDVKSWTTMVDGLAING------RVDDARELFDRMPVR----NVVSW 235
++DA F+ M + + T VD + G R D A L+ +M +R N+ S+
Sbjct: 87 LDDAIDFFDYMVRS--RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 236 NVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ 291
N++IK + +L +L F ++ + D+ ++NTL+ G ++ A LF M +
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 292 KN-------------------VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
VIT+ ++ G G EA + NK+ L + T
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDVVT 263
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
+ T++ + + + +T + + SA+I+ K G A+ +F E L
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 393 LR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVE 450
+ ++ ++N MI + G +A L M E + +T+ L++A G +
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 451 EGLQYFDKLL 460
E + D++L
Sbjct: 384 EAEKLCDEML 393
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 145/558 (25%), Positives = 266/558 (47%), Gaps = 46/558 (8%)
Query: 50 TSISRLCQEGRIDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEARKLFDGPDA- 104
T I +EGR+D A L D M + D+ L+ I+ + G + A K F +A
Sbjct: 208 TLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEAN 267
Query: 105 --MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR-----SWNTMIDGYARNGQTEK 157
D VT+T+++ K N+++EA +F E E+N R ++NTMI GY G+ ++
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMF-EHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER---DVKSWTTMVDG 210
A L R + +V+++N I+ L + G++++A F +M++ ++ ++ ++D
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDM 386
Query: 211 LAINGRVDDARELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPER----D 262
L G++D A EL D M NV + N+M+ K+++LDEA +FE M + D
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 263 MPSWNTLVTGFIQNGDLNRAEKLFHEM----PQKNVITWTAMMTGYVQHGLSEEALKIFN 318
++ +L+ G + G ++ A K++ +M + N I +T+++ + HG E+ KI+
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
+ + P+ T + +G+ + + I F S LI+ K
Sbjct: 507 DM-INQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKA 565
Query: 379 GELHIARRIF----DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
G + +F ++G + D ++N +I + G +A L +M+ GF+ V
Sbjct: 566 GFANETYELFYSMKEQGCVL--DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVV 623
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEG 494
TY ++ + ++E F++ K++ I++ Y+ L+D G+ GR+ EA+ I+E
Sbjct: 624 TYGSVIDGLAKIDRLDEAYMLFEEA-KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEE 682
Query: 495 L---GVDLSLSVWGPLLAGC--NVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVG 549
L G+ +L W LL N + + K LK P N TY +L N V
Sbjct: 683 LMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTP-NQVTYGILINGLCKVR 741
Query: 550 KWKEAANVRMKMKDKGLK 567
K+ +A +M+ +G+K
Sbjct: 742 KFNKAFVFWQEMQKQGMK 759
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 205/439 (46%), Gaps = 34/439 (7%)
Query: 35 STSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCG 90
S + L ++ N + RLC+ ++D+A +F+ M + D + ++I+G G
Sbjct: 402 SMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG 461
Query: 91 VIKEARKLFD---GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERN----VRSWN 143
+ +A K+++ D + + +T+L+ + + E+ +++ +M +N ++ N
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 144 TMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRER 199
T +D + G+ EK +F + R V S++ +I L + G + F M+E+
Sbjct: 522 TYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ 581
Query: 200 ----DVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEA 251
D +++ ++DG G+V+ A +L + M + VV++ +I G AK RLDEA
Sbjct: 582 GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEA 641
Query: 252 LELFE----RMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTG 303
LFE + E ++ +++L+ GF + G ++ A + E+ QK N+ TW +++
Sbjct: 642 YMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDA 701
Query: 304 YVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQE 363
V+ EAL F ++ + PN T+ ++ + N+ Q + K +
Sbjct: 702 LVKAEEINEALVCFQSMK-ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKP 760
Query: 364 STYVVSALINMYSKCGELHIARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLF 421
ST + +I+ +K G + A +FD D +N MI ++ +A +LF
Sbjct: 761 STISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLF 820
Query: 422 NKMQELGFQANDVTYVELL 440
+ + G ++ T V LL
Sbjct: 821 EETRRRGLPIHNKTCVVLL 839
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 209/476 (43%), Gaps = 66/476 (13%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDL----HLWGTMINGYIMCGVIKEARKLFDGPD- 103
N I LC+ G++D A +L D M + L M++ + EA +F+ D
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 104 --AMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS----WNTMIDGYARNGQTEK 157
D +T+ +L++G K+ ++++A +++ +M + + R+ + ++I + +G+ E
Sbjct: 441 KVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKED 500
Query: 158 ALDLFRRMPERNVVS----WNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
+++ M +N NT + + + G E + F +++ R D +S++ ++
Sbjct: 501 GHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIH 560
Query: 210 GLAINGRVDDARELFDRMPVRNVV----SWNVMIKGYAKNRRLDEALELFERMP----ER 261
GL G ++ ELF M + V ++N++I G+ K ++++A +L E M E
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIF 317
+ ++ +++ G + L+ A LF E K NV+ +++++ G+ + G +EA I
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
+L L PN T+ ++L A +NE Q + + K
Sbjct: 681 EELM-QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKEL-----------------K 722
Query: 378 CGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
C + I GL + R +A + +MQ+ G + + ++Y
Sbjct: 723 CTPNQVTYGILINGLCKVRKF----------------NKAFVFWQEMQKQGMKPSTISYT 766
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIE 493
+++ + AG + E FD+ N + Y +++ R +AF++ E
Sbjct: 767 TMISGLAKAGNIAEAGALFDRFKANGGVP-DSACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 157/380 (41%), Gaps = 59/380 (15%)
Query: 138 NVRSWNTMIDGYARNGQTEKALD---LFRRMPERNVVS-WNTIIKALSECGRIEDAQWHF 193
+V + M+ G + + + D + R+ R S + T+I A S + F
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 194 NQMRE----RDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGY--- 242
QM+E V +TT++ G A GRVD A L D M ++V +NV I +
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 243 --------------------------------AKNRRLDEALELFERMPE-RDMP---SW 266
K RLDEA+E+FE + + R +P ++
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
NT++ G+ G + A L K +VI + ++T + G +EALK+F +++
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
D A PN T+ ++ L+ ++ + K + V+ +++ K +L
Sbjct: 372 DAA--PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 383 IARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
A +F+E + D I++ +I G +A ++ KM + + N + Y L+
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 441 TACSHAGLVEEGLQYFDKLL 460
+ G E+G + + ++
Sbjct: 490 KNFFNHGRKEDGHKIYKDMI 509
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 151/338 (44%), Gaps = 19/338 (5%)
Query: 246 RRL---DEALELFERMPER-DMP----SWNTLVTGFIQNGDLNRAEKLFHEMP----QKN 293
RRL + A+E F R ++P S+N+L+ + + + +++ EM +
Sbjct: 73 RRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPS 132
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
V T M+ G V+ E + ++ +P + T++GA S + + +
Sbjct: 133 VNTCIEMVLGCVKANKLREGYDVVQMMRK-FKFRPAFSAYTTLIGAFSAVNHSDMMLTLF 191
Query: 354 QLISKTAFQESTYVVSALINMYSKCGELHIARRIFDE--GLLRQRDLISWNGMIAAYAHH 411
Q + + ++ + ++ + LI ++K G + A + DE D++ +N I ++
Sbjct: 192 QQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKV 251
Query: 412 GYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH 471
G A F++++ G + ++VTY ++ A ++E ++ F+ L KNR +
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTY-A 310
Query: 472 YACLVDLCGRAGRLKEAFNIIE---GLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL 528
Y ++ G AG+ EA++++E G S+ + +L G D V +++
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 529 KIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
K N TY++L +M GK A +R M+ GL
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL 408
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 217/441 (49%), Gaps = 61/441 (13%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHL----WGTMINGYIMCGVIKEARKLFDGPDA 104
NT I+ LC EGR+ +A L ++M + LH+ +GT++NG G K A L +
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 105 M---KDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEK 157
DVV ++A+++ K +A+ LF EM E+ NV ++N MIDG+ G+
Sbjct: 290 THIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSD 349
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
A L R M ER +V+++N +I A + G++ +A+ ++M R D ++ +M+
Sbjct: 350 AQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIY 409
Query: 210 GLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM----PS 265
G + R DDA+ +FD M +VV++N +I Y + +R+DE ++L + R + +
Sbjct: 410 GFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 469
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQ 321
+NTL+ GF + +LN A+ LF EM V IT ++ G+ ++ EEAL++F +Q
Sbjct: 470 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 322 ADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGEL 381
DL + IH + + E+ + +L +
Sbjct: 530 MSKI----------------DLDTVAYNIIIHGMCKGSKVDEAWDLFCSL--------PI 565
Query: 382 HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
H G+ + D+ ++N MI+ + +A LF+KM++ G + ++ TY L+
Sbjct: 566 H--------GV--EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 442 ACSHAGLVEEGLQYFDKLLKN 462
C AG +++ ++ ++ N
Sbjct: 616 GCLKAGEIDKSIELISEMRSN 636
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 162/359 (45%), Gaps = 46/359 (12%)
Query: 135 PERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQ 190
P N +I + R + + A+ L+R+M R N+ S+N +IK +C ++ +
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSL 161
Query: 191 WHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRM------------------- 227
F ++ + DV ++ T++ GL + R+ +A LF M
Sbjct: 162 STFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIG 221
Query: 228 --PVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNR 281
PV V+++N +I G R+ EA L +M + D+ ++ T+V G + GD
Sbjct: 222 LTPV--VITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 282 AEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL 337
A L +M + +V+ ++A++ + G +A +F+++ + + PN T+ ++
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMI 338
Query: 338 GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ-- 395
++ Q++ + + + +ALI+ K G+L A ++ DE L R
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF 398
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
D +++N MI + H +A ++F+ M + VT+ ++ A V+EG+Q
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQ 453
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 129/310 (41%), Gaps = 38/310 (12%)
Query: 186 IEDAQWHFNQMRERDVKSWTTMVDGLAING------RVDDARELFDRMPVR----NVVSW 235
++DA F+ M + + T VD + G R D A L+ +M +R N+ S+
Sbjct: 87 LDDAIDFFDYMVRS--RPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 236 NVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ 291
N++IK + +L +L F ++ + D+ ++NTL+ G ++ A LF M +
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 292 KN-------------------VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
VIT+ ++ G G EA + NK+ L + T
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-VGKGLHIDVVT 263
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
+ T++ + + + +T + + SA+I+ K G A+ +F E L
Sbjct: 264 YGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEML 323
Query: 393 LR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVE 450
+ ++ ++N MI + G +A L M E + +T+ L++A G +
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 451 EGLQYFDKLL 460
E + D++L
Sbjct: 384 EAEKLCDEML 393
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 220/439 (50%), Gaps = 39/439 (8%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
NT I L + +A L DRM R DL +GT++NG G I A L +
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
K DVV +T +++ + +A LF EM + +R ++N++I G+
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
A L M ER NVV+++ +I A + G++ +A+ +++M +R D+ +++++++
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDM-- 263
G ++ R+D+A+ +F+ M + NVV++N +IKG+ K +R++E +ELF M +R +
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 264 --PSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIF 317
++NTL+ G Q GD + A+K+F +M ++IT++ ++ G ++G E+AL +F
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
LQ ++P+ T+ ++ + +G + +S + + + + +I+ + +
Sbjct: 489 EYLQKSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Query: 378 CGELHIARRIFDE----GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
G A +F E G L ++N +I A G + L +M+ GF D
Sbjct: 548 KGLKEEADALFREMKEDGTLPNSG--TYNTLIRARLRDGDKAASAELIKEMRSCGF-VGD 604
Query: 434 VTYVELLTACSHAGLVEEG 452
+ + ++ H G +E+
Sbjct: 605 ASTISMVINMLHDGRLEKS 623
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 129/576 (22%), Positives = 258/576 (44%), Gaps = 86/576 (14%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMP----ERDLHLWGTMINGY-------IMCGVIKEARK 97
N +S + + + D L +RM DL+ + +IN + + V+ + K
Sbjct: 84 NKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMK 143
Query: 98 LFDGPDAMKDVVTWTALVNGYVKLNQIEEA----ERLFYEMPERNVRSWNTMIDGYARNG 153
L PD +VT ++L+NGY +I EA +++F + N ++NT+I G +
Sbjct: 144 LGYEPD----IVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 154 QTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWT 205
+ +A+ L RM R ++ ++ T++ L + G I+ A +M E DV +T
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 206 TMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER 261
T++D L V+DA LF M + NVV++N +I+ R +A L M ER
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 262 ----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEA 313
++ +++ L+ F++ G L AEKL+ EM ++ ++ T+++++ G+ H +EA
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 379
Query: 314 LKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALIN 373
+F + + PN T+ T++ + EG ++ + +S+ +T + LI
Sbjct: 380 KHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQ 438
Query: 374 MYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
+ G+ +A++I F KM G +
Sbjct: 439 GLFQAGDCDMAQKI---------------------------------FKKMVSDGVPPDI 465
Query: 434 VTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIE 493
+TY LL G +E+ L F+ L K++ ++ Y +++ +AG++++ +++
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 494 GL---GVDLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVG 549
L GV ++ ++ +++G C + L + N+GTY+ L + A +
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL--IRARLR 582
Query: 550 KWKEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFV 585
+AA+ + +K+ C +V +T+ + +
Sbjct: 583 DGDKAASAEL------IKEMRSCGFVGDASTISMVI 612
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 180/407 (44%), Gaps = 45/407 (11%)
Query: 216 RVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWN 267
++DDA +LF M P+ ++V +N ++ AK + D + L ERM D+ S+N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 268 TLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
L+ F + L A + +M + +++T ++++ GY EA+ + +++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFV- 178
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA---FQESTYVVSALINMYSKCGE 380
+PNT TF T++ L N+ + LI + Q + ++N K G+
Sbjct: 179 MEYQPNTVTFNTLIHG---LFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 381 LHIARRIF---DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
+ +A + ++G + + D++ + +I A ++ +A+NLF +M G + N VTY
Sbjct: 236 IDLALSLLKKMEKGKI-EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL-- 495
L+ + G + + +++ R I ++ L+D + G+L EA + + +
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 353
Query: 496 -GVDLSLSVWGPLLAGCNVHGNADIGK-LVAKKILKIEPENAGTYSLLSNMYASVGKWKE 553
+D + + L+ G +H D K + I K N TY+ L + + +E
Sbjct: 354 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
Query: 554 AANVRMKMKDKGLKKQPGCSWVEVGNTVQ-------VFVVGDKSHSQ 593
+ +M +GL VGNTV +F GD +Q
Sbjct: 414 GMELFREMSQRGL----------VGNTVTYNTLIQGLFQAGDCDMAQ 450
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/430 (27%), Positives = 210/430 (48%), Gaps = 37/430 (8%)
Query: 56 CQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDG---PDAMKDV 108
C RI DA L D+M E D + T+I+G + EA L D D+
Sbjct: 164 CHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDL 223
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLFRR 164
VT+ +VNG K I+ A L +M + NV +NT+ID + E A+DLF
Sbjct: 224 VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE 283
Query: 165 MPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGR 216
M + NVV++N++I L GR DA + M E+ +V ++ ++D G+
Sbjct: 284 METKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGK 343
Query: 217 VDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPERD----MPSWNT 268
+ +A +L + M R++ +++N++I G+ + RLDEA ++F+ M +D + ++NT
Sbjct: 344 LVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNT 403
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
L+ GF + + +LF EM Q+ N +T+T ++ G+ Q G + A +F ++ ++
Sbjct: 404 LINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR 463
Query: 325 ALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIA 384
+ + T+ +L L+ I + + K+ + + ++ + +I K G++ A
Sbjct: 464 -VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Query: 385 RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTA-- 442
+F L + D++++N MI+ +EA +LF KM+E G N TY L+ A
Sbjct: 523 WDLF-CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 443 --CSHAGLVE 450
C A E
Sbjct: 582 RDCDRAASAE 591
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 170/320 (53%), Gaps = 31/320 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLH----LWGTMINGYIMCGVIKEARKLFDGPDA 104
NT I LC+ ++ A LF M + + + ++IN G +A +L
Sbjct: 262 NTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLE 321
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
K +VVT+ AL++ + K ++ EAE+L EM +R++ ++N +I+G+ + + ++
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
A +F+ M + N+ ++NT+I +C R+ED F +M +R + ++TT++
Sbjct: 382 AKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQ 441
Query: 210 GLAINGRVDDARELF-----DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMP 264
G G D A+ +F +R+P +++++++++ G +LD AL +F+ + + +M
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPT-DIMTYSILLHGLCSYGKLDTALVIFKYLQKSEME 500
Query: 265 ----SWNTLVTGFIQNGDLNRAEKLFHEMPQK-NVITWTAMMTGYVQHGLSEEALKIFNK 319
+NT++ G + G + A LF + K +V+T+ M++G L +EA +F K
Sbjct: 501 LNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRK 560
Query: 320 LQADHALKPNTGTFVTVLGA 339
++ D L PN+GT+ T++ A
Sbjct: 561 MKEDGTL-PNSGTYNTLIRA 579
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 197/418 (47%), Gaps = 38/418 (9%)
Query: 75 DLHLWGTMINGY-------IMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEA 127
DL+ + IN + + V+ + KL PD +VT ++L+NGY +I +A
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPD----IVTLSSLLNGYCHSKRISDA 172
Query: 128 ERLFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKA 179
L +M E + ++ T+I G + + +A+ L +M +R ++V++ T++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 180 LSECGRIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVR----N 231
L + G I+ A N+M +K+ + T++D L V+ A +LF M + N
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 232 VVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFH 287
VV++N +I R +A L M E+ ++ ++N L+ F + G L AEKL
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352
Query: 288 EMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
EM Q+++ IT+ ++ G+ H +EA ++F + + L PN T+ T++
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-PNIQTYNTLINGFCKC 411
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ--RDLISW 401
+ +G ++ + +S+ +T + +I + + G+ A+ +F + + + D++++
Sbjct: 412 KRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTY 471
Query: 402 NGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
+ ++ +G A+ +F +Q+ + N Y ++ AG V E F L
Sbjct: 472 SILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 223/496 (44%), Gaps = 39/496 (7%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLFR 163
+V + L++ K+N+ E L +M ++ +++ I+ + R Q AL +
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 164 RMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAING 215
+M E ++V+ ++++ RI DA +QM E D ++TT++ GL ++
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 216 RVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPS----WN 267
+ +A L D+M R ++V++ ++ G K +D AL L +M + + +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
T++ + + A LF EM K NV+T+ +++ +G +A ++ + + +
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM-LE 321
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+ PN TF ++ A L E +++H+ + + + T + LIN + L
Sbjct: 322 KKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDE 381
Query: 384 ARRIFDEGLLRQRDLI----SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
A+++F + +D + ++N +I + ++ + LF +M + G N VTY +
Sbjct: 382 AKQMFK--FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 440 LTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLG--- 496
+ AG + F +++ NR + L LC G+L A I + L
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY-GKLDTALVIFKYLQKSE 498
Query: 497 VDLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAA 555
++L++ ++ ++ G C + L L I+P+ TY+ + + S +EA
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCS--LSIKPD-VVTYNTMISGLCSKRLLQEAD 555
Query: 556 NVRMKMKDKGLKKQPG 571
++ KMK+ G G
Sbjct: 556 DLFRKMKEDGTLPNSG 571
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Query: 55 LCQEGRIDDARKLFDRMPERDLHL----WGTMINGYIMCGVIKEARKLFDGPDAMKDVVT 110
LC G++D A +F + + ++ L + TMI G G + EA LF DVVT
Sbjct: 478 LCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT 537
Query: 111 WTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRMP 166
+ +++G ++EA+ LF +M E N ++NT+I R+ + +L + M
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 167 ERNVV 171
V
Sbjct: 598 SSGFV 602
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 211/427 (49%), Gaps = 34/427 (7%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDG--- 101
N+ ++ C RI +A L D+M E D + T+++G EA L +
Sbjct: 139 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 198
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEK 157
D+VT+ A++NG K + + A L +M E +V ++T+ID + +
Sbjct: 199 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
AL+LF M + +V +++++I L GR DA + M ER +V ++ +++D
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERD-MP 264
A G++ +A +LFD M R N+V++N +I G+ + RLDEA ++F M +D +P
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLP 378
Query: 265 ---SWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIF 317
++NTL+ GF + + +LF +M ++ N +T+T ++ G+ Q + A +F
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
++ +D + PN T+ T+L L + + + + K+ + Y + + K
Sbjct: 439 KQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 378 CGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
G++ +F L+ + D+I++N MI+ + G +EA LF KM+E G + T
Sbjct: 498 AGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGT 557
Query: 436 YVELLTA 442
Y L+ A
Sbjct: 558 YNTLIRA 564
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 145/268 (54%), Gaps = 27/268 (10%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLH----LWGTMINGYIMCGVIKEARKLFD---G 101
N+ I +EG++ +A KLFD M +R + + ++ING+ M + EA+++F
Sbjct: 314 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 373
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEK 157
D + DVVT+ L+NG+ K ++ + LF +M R N ++ T+I G+ + +
Sbjct: 374 KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVD 209
A +F++M N++++NT++ L + G++E A F ++ E D+ ++ M +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERM----PER 261
G+ G+V+D +LF + ++ +V+++N MI G+ K +EA LF +M P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEM 289
D ++NTL+ +++GD + +L EM
Sbjct: 554 DSGTYNTLIRAHLRDGDKAASAELIKEM 581
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 202/420 (48%), Gaps = 42/420 (10%)
Query: 75 DLHLWGTMINGYIMC---------GVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIE 125
+L+ + MIN +C ++ + KL GP +VT +L+NG+ N+I
Sbjct: 99 NLYTYNIMIN--CLCRRSQLSFALAILGKMMKLGYGPS----IVTLNSLLNGFCHGNRIS 152
Query: 126 EAERLFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTII 177
EA L +M E + ++ T++ G ++ + +A+ L RM + ++V++ +I
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 178 KALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR--- 230
L + G + A N+M E DV ++T++D L VDDA LF M +
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIR 272
Query: 231 -NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKL 285
+V +++ +I R +A L M ER ++ ++N+L+ F + G L AEKL
Sbjct: 273 PDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKL 332
Query: 286 FHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACS 341
F EM Q+ N++T+ +++ G+ H +EA +IF + + L P+ T+ T++
Sbjct: 333 FDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLINGFC 391
Query: 342 DLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLI 399
+ +G ++ + +S+ +T + LI+ + + + A+ +F + + +++
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
++N ++ +G ++A+ +F +Q+ + + TY + AG VE+G F L
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 162/381 (42%), Gaps = 77/381 (20%)
Query: 147 DGY----ARNG----QTEKALDLFRRM----PERNVVSWNTIIKALSECGRIEDAQWHFN 194
DGY +RN + ++A+DLF M P ++V ++ ++ A+++ + D F
Sbjct: 30 DGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKF-DLVISFG 88
Query: 195 QMRE-----RDVKSWTTMVDGLAINGRVDDARELFDRM------PVRNVVSWNVMIKGYA 243
+ E ++ ++ M++ L ++ A + +M P ++V+ N ++ G+
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGP--SIVTLNSLLNGFC 146
Query: 244 KNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMP----QKNVI 295
R+ EA+ L ++M E D ++ TLV G Q+ + A L M Q +++
Sbjct: 147 HGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLV 206
Query: 296 TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQL 355
T+ A++ G + G + AL + NK++
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKME---------------------------------- 232
Query: 356 ISKTAFQESTYVVSALINMYSKCGELHIARRIFDE----GLLRQRDLISWNGMIAAYAHH 411
K + + S +I+ K + A +F E G+ + D+ +++ +I+ ++
Sbjct: 233 --KGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI--RPDVFTYSSLISCLCNY 288
Query: 412 GYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH 471
G +A L + M E N VT+ L+ A + G + E + FD++++ RSI
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ-RSIDPNIVT 347
Query: 472 YACLVDLCGRAGRLKEAFNII 492
Y L++ RL EA I
Sbjct: 348 YNSLINGFCMHDRLDEAQQIF 368
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 154/610 (25%), Positives = 265/610 (43%), Gaps = 108/610 (17%)
Query: 59 GRIDDARKLFDR-------MPERDLHLWGTMINGYIMCGVIKEA-----RKLFDG--PDA 104
G +D A ++FD + RD+ +W +MI+GY KE R L G PDA
Sbjct: 109 GFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDA 168
Query: 105 MK---------------------------------DVVTWTALVNGYVKLNQIEEAERLF 131
D TAL++ Y K +A R+F
Sbjct: 169 FSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVF 228
Query: 132 YEMPER-NVRSWNTMIDGYARNGQTEKALDLFRRMPERNV-VSWNTIIKALSECGRIEDA 189
E+ ++ NV WN MI G+ +G E +LDL+ +V + + AL C + E++
Sbjct: 229 VEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENS 288
Query: 190 ----QWHFNQMR---ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGY 242
Q H + ++ D T+++ + G V +A +F + + + WN M+ Y
Sbjct: 289 GFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAY 348
Query: 243 AKNRRLDEALELFERMPERD-MPSWNTL--------VTGFIQNGDLNRAEK--------- 284
A+N AL+LF M ++ +P TL V G G AE
Sbjct: 349 AENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTS 408
Query: 285 ---------------------LFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
+F M +K+++ W ++++G ++G +EALK+F ++ D
Sbjct: 409 TIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDD 468
Query: 324 H-ALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+LKP++ +V AC+ L L G Q+H + KT + +V S+LI++YSKCG
Sbjct: 469 DDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPE 528
Query: 383 IARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTA 442
+A ++F + ++++WN MI+ Y+ + + +I+LFN M G + V+ +L A
Sbjct: 529 MALKVFTS--MSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Query: 443 CSHAGLVEEGLQYFDKLLKNRSIQVREDHYA--CLVDLCGRAGRLKEAFNIIEGLGVDLS 500
S + +G L+ + + D + L+D+ + G K A NI + + S
Sbjct: 587 ISSTASLLKGKSLHGYTLR---LGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQ-HKS 642
Query: 501 LSVWGPLLAGCNVHGNADIGKLVAKKILKI--EPENAGTYSLLSNMYASVGKWKEAANVR 558
L W ++ G HG+ + ++ K P++ SL+S S G +E N+
Sbjct: 643 LITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHS-GFVEEGKNIF 701
Query: 559 MKMK-DKGLK 567
MK D G++
Sbjct: 702 EFMKQDYGIE 711
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 199/462 (43%), Gaps = 64/462 (13%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLF-------YEMPERNVRSWNTMIDGYARNGQTEKAL 159
D T+LVN YVK ++ A ++F + R+V WN+MIDGY + + ++ +
Sbjct: 94 DPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGV 153
Query: 160 DLFRRM----PERNVVSWNTIIKALSECG---RIEDAQWHFNQMRER-DVKSW--TTMVD 209
FRRM + S + ++ + + G R E Q H +R D S+ T ++D
Sbjct: 154 GCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALID 213
Query: 210 GLAINGRVDDARELFDRMPVR-NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNT 268
G DA +F + + NVV WNVMI G+ + + +L+L+ + +T
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST 273
Query: 269 LVTG---------------------------------------FIQNGDLNRAEKLFHEM 289
TG + + G + AE +F +
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCV 333
Query: 290 PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG 349
K + W AM+ Y ++ AL +F ++ L P++ T V+ CS L N G
Sbjct: 334 VDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVL-PDSFTLSNVISCCSVLGLYNYG 392
Query: 350 QQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYA 409
+ +H + K Q ++ + SAL+ +YSKCG A +F + ++D+++W +I+
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKS--MEEKDMVAWGSLISGLC 450
Query: 410 HHGYGKEAINLFNKMQ--ELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQV 467
+G KEA+ +F M+ + + + + AC+ + GLQ ++K + +
Sbjct: 451 KNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKT-GLVL 509
Query: 468 REDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLA 509
+ L+DL + G + A + + + ++ W +++
Sbjct: 510 NVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMIS 550
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/500 (20%), Positives = 206/500 (41%), Gaps = 91/500 (18%)
Query: 41 LHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFD 100
LH+ C + +S + G + +A +F + ++ L +W M+ Y A LF
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 101 ---GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNT----MIDGYARNG 153
+ D T + +++ L + + E+ +R ++S +T ++ Y++ G
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG 422
Query: 154 QTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERD------------- 200
A +F+ M E+++V+W ++I L + G+ ++A F M++ D
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSV 482
Query: 201 ----------------------------VKSWTTMVDGLAINGRVDDARELFDRMPVRNV 232
V ++++D + G + A ++F M N+
Sbjct: 483 TNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM 542
Query: 233 VSWNVMIKGYAKNRRLDEALELFERM------PER------------------------- 261
V+WN MI Y++N + +++LF M P+
Sbjct: 543 VAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGY 602
Query: 262 ----DMPS----WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEA 313
+PS N L+ +++ G AE +F +M K++ITW M+ GY HG A
Sbjct: 603 TLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITA 662
Query: 314 LKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT-AFQESTYVVSALI 372
L +F++++ P+ TF++++ AC+ + EG+ I + + + + + + ++
Sbjct: 663 LSLFDEMK-KAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMV 721
Query: 373 NMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
++ + G L A F + + + D W +++A H + I K+ + +
Sbjct: 722 DLLGRAGLLEEAYS-FIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERG 780
Query: 433 DVTYVELLTACSHAGLVEEG 452
TYV+L+ AGL E
Sbjct: 781 S-TYVQLINLYMEAGLKNEA 799
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 139/341 (40%), Gaps = 56/341 (16%)
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQES 364
+Q G +AL +++K + TF ++L ACS L L+ G+ IH + ++
Sbjct: 35 IQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYD 94
Query: 365 TYVVSALINMYSKCGELHIARRIFD-----EGLLRQRDLISWNGMIAAYAHHGYGKEAIN 419
++ ++L+NMY KCG L A ++FD + + RD+ WN MI Y KE +
Sbjct: 95 PFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVG 154
Query: 420 LFNKMQELGFQANDVTYVELLTACSHAGLV--EEGLQYFDKLLKNRSIQVREDHYACLVD 477
F +M G + + + +++ G EEG Q +L+N S+ L+D
Sbjct: 155 CFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN-SLDTDSFLKTALID 213
Query: 478 LCGRAGRLKEAFNI----------------IEGLG-------------------VDLSLS 502
+ + G +A+ + I G G V L +
Sbjct: 214 MYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVST 273
Query: 503 VWGPLLAGCNVHGNADIGKLVAKKILKIEPENAG--TYSLLSNMYASVGKWKEAANVRMK 560
+ L C+ N+ G+ + ++K+ N SLLS MY+ G EA V
Sbjct: 274 SFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLS-MYSKCGMVGEAETVFSC 332
Query: 561 MKDKGLKKQPGCSWVEVGNT-VQVFVVGDKSHSQSELLGYL 600
+ DK L E+ N V + D +S +L G++
Sbjct: 333 VVDKRL---------EIWNAMVAAYAENDYGYSALDLFGFM 364
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 137/598 (22%), Positives = 271/598 (45%), Gaps = 75/598 (12%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDL----HLWGTMINGYIMCGVIKEARKLFD---G 101
NT I L + R+DDA +LF M + + + I+ Y G A + F+
Sbjct: 402 NTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT 461
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE----RNVRSWNTMIDGYARNGQTEK 157
++V A + K + EA+++FY + + + ++N M+ Y++ G+ ++
Sbjct: 462 KGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDE 521
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVD 209
A+ L M E +V+ N++I L + R+++A F +M+E +K ++ T++
Sbjct: 522 AIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLA 581
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER---- 261
GL NG++ +A ELF+ M + N +++N + KN + AL++ +M +
Sbjct: 582 GLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVP 641
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ---KNVITWTAMMTGYVQHGLSEEALKIFN 318
D+ ++NT++ G ++NG + A FH+M + + +T ++ G V+ L E+A KI
Sbjct: 642 DVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIIT 701
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ-LISKTAFQESTYVVSALINMYSK 377
+ A +P + ++G+ AG++ + L++ ++ ++ +I K
Sbjct: 702 NFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCK 761
Query: 378 CGELHIARRIFDE-------------------GLLRQR-------------------DLI 399
+ AR +F++ GLL D+
Sbjct: 762 HNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVA 821
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
++N ++ AY G E L+ +M +AN +T+ +++ AG V++ L + L
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 460 LKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVHGN 516
+ +R Y L+D ++GRL EA + EG+ G + +++ L+ G G
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 517 ADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 572
AD + K+++K + P+ TYS+L + VG+ E + ++K+ GL C
Sbjct: 942 ADAACALFKRMVKEGVRPD-LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 156/306 (50%), Gaps = 29/306 (9%)
Query: 110 TWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRM 165
T+ L+ G ++ + IE A+ +F ++ +V ++N ++D Y ++G+ ++ +L++ M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 166 P----ERNVVSWNTIIKALSECGRIEDA-QWHFNQMRERDVK----SWTTMVDGLAINGR 216
E N ++ N +I L + G ++DA +++ M +RD ++ ++DGL+ +GR
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 906
Query: 217 VDDARELFDRM------PVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSW 266
+ +A++LF+ M P N +N++I G+ K D A LF+RM + D+ ++
Sbjct: 907 LYEAKQLFEGMLDYGCRP--NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTY 964
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
+ LV G ++ F E+ + +V+ + ++ G + EEAL +FN+++
Sbjct: 965 SVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+ P+ T+ +++ + E +I+ I + + + + +ALI YS G+
Sbjct: 1025 SRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPE 1084
Query: 383 IARRIF 388
A ++
Sbjct: 1085 HAYAVY 1090
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 117/583 (20%), Positives = 266/583 (45%), Gaps = 70/583 (12%)
Query: 17 LKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFD----RMP 72
LK+ P + + + ++++ + + +H+ + CN + L +G++++ +FD R+
Sbjct: 92 LKSFPD-TDSSFSYFKSVAGNLNLVHTT-ETCNYMLEALRVDGKLEEMAYVFDLMQKRII 149
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFY 132
+RD + + T+ + G +K+A P A++ + + ++N Y
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQA------PYALRKMREFGFVLNAY-------------- 189
Query: 133 EMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSECGRIED 188
S+N +I ++ +A++++RRM ++ ++++++ L + I+
Sbjct: 190 --------SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDS 241
Query: 189 AQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIK 240
+M + +V ++T + L G++++A E+ RM +VV++ V+I
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 241 GYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ----K 292
R+LD A E+FE+M + D ++ TL+ F N DL+ ++ + EM +
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVP 361
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
+V+T+T ++ + G EA + ++ D + PN T+ T++ + L++ ++
Sbjct: 362 DVVTFTILVDALCKAGNFGEAFDTLDVMR-DQGILPNLHTYNTLICGLLRVHRLDDALEL 420
Query: 353 HQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAH 410
+ + + Y I+ Y K G+ A F++ + ++++ N + + A
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480
Query: 411 HGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRS----IQ 466
G +EA +F ++++G + VTY ++ S G ++E ++ ++++N I
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 467 VREDHYACLVDLCGRAGRLKEA---FNIIEGLGVDLSLSVWGPLLAGCNVHGN-ADIGKL 522
V L++ +A R+ EA F ++ + + ++ + LLAG +G + +L
Sbjct: 541 VNS-----LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIEL 595
Query: 523 VAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 565
+ K P N T++ L + + A + KM D G
Sbjct: 596 FEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 210/485 (43%), Gaps = 75/485 (15%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
NT LC+ + A K+ +M + D+ + T+I G + G +KEA F
Sbjct: 612 NTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK 671
Query: 105 M--KDVVTWTALVNGYVKLNQIEEAER---------------LFYE------MPERNVR- 140
+ D VT L+ G VK + IE+A + LF+E + E +
Sbjct: 672 LVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDN 731
Query: 141 ----SWNTMIDGYARNGQT---------------EKALDLFRRMP-----ERNVVSWNTI 176
S + +G R+G + A LF + + + ++N +
Sbjct: 732 AVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLL 791
Query: 177 IKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVR-- 230
I L E IE AQ F Q++ DV ++ ++D +G++D+ EL+ M
Sbjct: 792 IGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC 851
Query: 231 --NVVSWNVMIKGYAKNRRLDEALELF-ERMPERDMP----SWNTLVTGFIQNGDLNRAE 283
N ++ N++I G K +D+AL+L+ + M +RD ++ L+ G ++G L A+
Sbjct: 852 EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911
Query: 284 KLFHEM----PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
+LF M + N + ++ G+ + G ++ A +F ++ ++P+ T+ +VL
Sbjct: 912 QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM-VKEGVRPDLKTY-SVLVD 969
Query: 340 CSDLAG-LNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ--- 395
C + G ++EG + + ++ + +IN K L A +F+E +
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 396 RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQY 455
DL ++N +I G +EA ++N++Q G + N T+ L+ S +G E
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 456 FDKLL 460
+ ++
Sbjct: 1090 YQTMV 1094
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/406 (27%), Positives = 199/406 (49%), Gaps = 34/406 (8%)
Query: 56 CQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDV 108
C RI DA L D+M E D + T+I+G + EA L D ++
Sbjct: 166 CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNL 225
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLFRR 164
VT+ +VNG K I+ A L +M E NV ++T+ID + + AL+LF
Sbjct: 226 VTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTE 285
Query: 165 MPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGR 216
M + NV++++++I L R DA + M ER +V ++ ++D G+
Sbjct: 286 MENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGK 345
Query: 217 VDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERD----MPSWNT 268
+ +A +L+D M R ++ +++ +I G+ + RLDEA +FE M +D + ++NT
Sbjct: 346 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
L+ GF + ++ +LF EM Q+ N +T+T ++ G+ Q + A +F ++ +D
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD- 464
Query: 325 ALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIA 384
+ PN T+ T+L L + + + + ++ + + Y + +I K G++
Sbjct: 465 GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 385 RRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELG 428
+F L+ + D+I +N MI+ + G +EA LF KM+E G
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 163/315 (51%), Gaps = 32/315 (10%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKE----ARKLFDGPDA 104
+T I LC+ DDA LF M + + + I C E A +L
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIE 323
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
K +VVT+ AL++ +VK ++ EAE+L+ EM +R++ +++++I+G+ + + ++
Sbjct: 324 RKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
A +F M + NVV++NT+I + RI++ F +M +R + ++TT++
Sbjct: 384 AKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIH 443
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMP- 264
G D+A+ +F +M N++++N ++ G KN +L++A+ +FE + M
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 503
Query: 265 ---SWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIF 317
++N ++ G + G + LF + K +VI + M++G+ + GL EEA +F
Sbjct: 504 TIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALF 563
Query: 318 NKLQADHALKPNTGT 332
K++ D L P++GT
Sbjct: 564 RKMREDGPL-PDSGT 577
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/511 (19%), Positives = 231/511 (45%), Gaps = 40/511 (7%)
Query: 88 MCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM----PERNVRSWN 143
+CG+ R G +++ L NG + ++++A LF M P ++ +N
Sbjct: 36 LCGMCYWGRAFSSGSGDYREI-----LRNGLHSM-KLDDAIGLFGGMVKSRPLPSIFEFN 89
Query: 144 TMIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMR-- 197
++ A+ + + + L +M N+ ++N +I +I A +M
Sbjct: 90 KLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL 149
Query: 198 --ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEA 251
E + + +++++G R+ DA L D+M + +++ +I G + + EA
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 252 LELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTG 303
+ L +RM +R ++ ++ +V G + GD++ A L ++M + NV+ ++ ++
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 304 YVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQE 363
++ ++AL +F +++ + ++PN T+ +++ + ++ ++ + +
Sbjct: 270 LCKYRHEDDALNLFTEME-NKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINP 328
Query: 364 STYVVSALINMYSKCGELHIARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLF 421
+ +ALI+ + K G+L A +++DE + R D+ +++ +I + H EA ++F
Sbjct: 329 NVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 388
Query: 422 NKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGR 481
M N VTY L+ A ++EG++ F + + R + Y L+ +
Sbjct: 389 ELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFRE-MSQRGLVGNTVTYTTLIHGFFQ 447
Query: 482 AGRLKEA---FNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL--KIEPENAG 536
A A F + GV ++ + LL G +G + +V + + K+EP
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP-TIY 506
Query: 537 TYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
TY+++ GK ++ ++ + KG+K
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK 537
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 210/442 (47%), Gaps = 73/442 (16%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMK---DVVTWTALVNGYVKLNQIEEAER 129
E D + T++NG+ + G + EA L D MK D+VT + L+NG ++ EA
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196
Query: 130 LFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFRRMPERN----VVSWNTIIKALS 181
L M E + ++ +++ ++G + ALDLFR+M ERN VV ++ +I +L
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256
Query: 182 ECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDA----RELFDRMPVRNVV 233
+ G +DA FN+M + DV ++++++ GL +G+ DD RE+ R + +VV
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 234 SWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEM 289
+++ +I + K +L EA EL+ M R D ++N+L+ GF + L+ A ++F M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 290 PQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVT-VLGACSDLA 344
K +++T++ ++ Y + ++ +++F ++ + L PNT T+ T VLG C
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS-KGLIPNTITYNTLVLGFCQS-G 434
Query: 345 GLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF---------------- 388
LN +++ Q + S L++ GEL+ A IF
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 389 -----------------------DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQ 425
D+G+ + D++++N MI G EA LF KM+
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGV--KPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 426 ELGFQANDVTYVELLTACSHAG 447
E G +D TY L+ A H G
Sbjct: 553 EDGCTPDDFTYNILIRA--HLG 572
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 189/388 (48%), Gaps = 37/388 (9%)
Query: 107 DVVTWTALVNGYVK-------LNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKAL 159
D+ T T ++N Y + + + A +L YE + +++T+++G+ G+ +A+
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYE---PDTITFSTLVNGFCLEGRVSEAV 160
Query: 160 DLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGL 211
L RM E ++V+ +T+I L GR+ +A ++M E D ++ +++ L
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220
Query: 212 AINGRVDDARELFDRMPVRN----VVSWNVMIKGYAKNRRLDEALELFERMPER----DM 263
+G A +LF +M RN VV ++++I K+ D+AL LF M + D+
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280
Query: 264 PSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI----TWTAMMTGYVQHGLSEEALKIFNK 319
++++L+ G +G + K+ EM +N+I T++A++ +V+ G EA +++N+
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
+ + P+T T+ +++ L+E Q+ L+ + S LIN Y K
Sbjct: 341 MIT-RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399
Query: 380 ELHIARRIFDE----GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
+ R+F E GL+ + I++N ++ + G A LF +M G + VT
Sbjct: 400 RVDDGMRLFREISSKGLIP--NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVT 457
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNR 463
Y LL G + + L+ F+K+ K+R
Sbjct: 458 YGILLDGLCDNGELNKALEIFEKMQKSR 485
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 182/402 (45%), Gaps = 39/402 (9%)
Query: 192 HFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM----PVRNVVSWNVMIKGYAKNRR 247
H++ + E + + +G+ ++ +V+DA +LF+ M P+ + +N + A+ ++
Sbjct: 27 HYSSITEAKLSYKERLRNGI-VDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQ 85
Query: 248 LDEALELFERMP----ERDMPSWNTLVTGFIQNGDL-------NRAEKLFHEMPQKNVIT 296
D L + M E DM + ++ + + L RA KL +E + IT
Sbjct: 86 YDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYE---PDTIT 142
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLI 356
++ ++ G+ G EA+ + +++ + +P+ T T++ ++E + +
Sbjct: 143 FSTLVNGFCLEGRVSEAVALVDRM-VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 357 SKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDL----ISWNGMIAAYAHHG 412
+ FQ ++N K G +A +F + + +R++ + ++ +I + G
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK--MEERNIKASVVQYSIVIDSLCKDG 259
Query: 413 YGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHY 472
+A++LFN+M+ G +A+ VTY L+ + G ++G + +++ R+I +
Sbjct: 260 SFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI-GRNIIPDVVTF 318
Query: 473 ACLVDLCGRAGRL---KEAFNIIEGLGVDLSLSVWGPLLAG-----CNVHGNADIGKLVA 524
+ L+D+ + G+L KE +N + G+ + L+ G C N +V+
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 525 KKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
K EP+ TYS+L N Y + + + ++ KGL
Sbjct: 379 KGC---EPDIV-TYSILINSYCKAKRVDDGMRLFREISSKGL 416
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 133/524 (25%), Positives = 237/524 (45%), Gaps = 92/524 (17%)
Query: 52 ISRLCQEGRIDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKD 107
I C+ G++D+A M E DL ++ ++I G+ CG + + LFD D
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGD 278
Query: 108 ---VVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEKALD 160
+T+ L+ G+ KL Q++EA +F M ER VR ++ +IDG G+T++AL
Sbjct: 279 SPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 161 LFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLA 212
L M E+ N V++N II L + G + DA M++R D ++ ++ GL
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 213 INGRVDDARELFDRM------PVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----D 262
G +D+A +L M +V+S+N +I G K RL +AL++++ + E+ D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 263 MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI----TWTAMMTGYVQHGLSEEALKIFN 318
+ N L+ ++ GD+N+A +L+ ++ ++ T+TAM+ G+ + G+ A +
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLC 518
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
K++ + Q S + + L++ K
Sbjct: 519 KMRV------------------------------------SELQPSVFDYNCLLSSLCKE 542
Query: 379 GELHIARRIFDEGLLRQRD-----LISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
G L A R+F+E QRD ++S+N MI G K A +L M G +
Sbjct: 543 GSLDQAWRLFEE---MQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDL 599
Query: 434 VTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC--LVDLCGRAGRLKEAFNI 491
TY +L+ G ++E + +FDK++ + D + C ++ C G + +
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMVDS---GFEPDAHICDSVLKYCISQGETDKLTEL 656
Query: 492 IEGLGVDLSLSVWGPLLAG-----CNVHGNADIGKLVAKKILKI 530
++ L VD + + L CN N D+ AK++L++
Sbjct: 657 VKKL-VDKDIVLDKELTCTVMDYMCNSSANMDL----AKRLLRV 695
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 121/472 (25%), Positives = 221/472 (46%), Gaps = 52/472 (11%)
Query: 134 MPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDA 189
MP+ V S+NT+I G+ + EKAL+L M ++V+W +I A + G++++A
Sbjct: 174 MPD--VFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 190 QWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVRN----VVSWNVMIKG 241
+M+ E D+ +T+++ G G +D + LFD + R +++N +I+G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 242 YAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----N 293
+ K +L EA E+FE M ER ++ ++ L+ G G A +L + M +K N
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
+T+ ++ + GL +A++I +L +P+ T+ +LG L+E ++
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Query: 354 QLISKTAFQESTYVVS--ALINMYSKCGELHIARRIFDEGLLRQR----DLISWNGMIAA 407
L+ K + V+S ALI+ K LH A I+D LL ++ D ++ N ++ +
Sbjct: 411 YLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYD--LLVEKLGAGDRVTTNILLNS 468
Query: 408 YAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGL--VEEGLQYFDKLLKNRSI 465
G +A+ L+ ++ + N TY ++ G+ V +GL L K R
Sbjct: 469 TLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL-----LCKMRVS 523
Query: 466 QVRED--HYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN--VHGNADIGK 521
+++ Y CL+ + G L +A+ + E + D + P + N + G+ G
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF----PDVVSFNIMIDGSLKAGD 579
Query: 522 LVAKKILKIEPENAG------TYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
+ + + L + AG TYS L N + +G EA + KM D G +
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFE 631
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 157/361 (43%), Gaps = 37/361 (10%)
Query: 143 NTMIDGYARNGQTEKALDLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK 202
N ++ R+ E A +R+M E + + L EC + QMR+
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC---------YVQMRK---- 122
Query: 203 SWTTMVDG-LAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER 261
T G LA+ + R NV + N+++KG +N +A+ L M
Sbjct: 123 --TGFAFGVLAL---------MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 262 ----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEA 313
D+ S+NT++ GF + +L +A +L +EM +++TW ++ + + G +EA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 314 LKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALIN 373
+ +++ L+ + + +++ D L+ G+ + + + + LI
Sbjct: 232 MGFLKEMKF-MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIR 290
Query: 374 MYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
+ K G+L A IF+ + R + ++ ++ G+I G KEA+ L N M E +
Sbjct: 291 GFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEP 350
Query: 432 NDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNI 491
N VTY ++ GLV + ++ + + K R+ + L LC + G L EA +
Sbjct: 351 NAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAK-GDLDEASKL 409
Query: 492 I 492
+
Sbjct: 410 L 410
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 11/145 (7%)
Query: 38 TSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIK 93
S L ++ D N +S LC+EG +D A +LF+ M D+ + MI+G + G IK
Sbjct: 522 VSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581
Query: 94 EARKLFDG---PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMI 146
A L G D+ T++ L+N ++KL ++EA F +M E + ++++
Sbjct: 582 SAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Query: 147 DGYARNGQTEKALDLFRRMPERNVV 171
G+T+K +L +++ ++++V
Sbjct: 642 KYCISQGETDKLTELVKKLVDKDIV 666
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 229/492 (46%), Gaps = 81/492 (16%)
Query: 22 TFIINGYPFLRTMSTSTSSLHSAMK--------DCNTSISRLCQEGRIDDARKLFDRMPE 73
+ +IN + R + + S++ +K +T I+ LC EGR+ +A +L DRM E
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 74 R----DLHLWGTMINGYIMCGVIKEARKLFDG-------PDAMK---------------- 106
DL T++NG + G EA L D P+A+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 107 ---------------DVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMID 147
D V ++ +++G K ++ A LF EM + N+ ++N +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 148 GYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER---- 199
G+ G+ + L R M +R NVV+++ +I + + G++ +A+ +M R
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 200 DVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELF 255
D ++T+++DG +D A ++ D M + N+ ++N++I GY K R+D+ LELF
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 256 ERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQH 307
+M R D ++NTL+ GF + G LN A++LF EM + N++T+ ++ G +
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 308 GLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYV 367
G SE+AL+IF K++ ++ + G + ++ + + +++ + + +
Sbjct: 487 GESEKALEIFEKIEKSK-MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 368 VSALINMYSKCGELHIARRIF----DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNK 423
+ +I K G L A +F ++G D ++N +I A+ G +++ L +
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDG--HAPDGWTYNILIRAHLGDGDATKSVKLIEE 603
Query: 424 MQELGFQANDVT 435
++ GF + T
Sbjct: 604 LKRCGFSVDAST 615
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 192/410 (46%), Gaps = 30/410 (7%)
Query: 79 WGTMINGYIMCGVIKEARKLFDGPDAM---KDVVTWTALVNGYVKLNQIEEAERLFYEMP 135
+ T+ING + G + EA +L D M D++T LVNG + EA L +M
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 136 ER----NVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIE 187
E N ++ +++ ++GQT A++L R+M ERN+ V ++ II L + G ++
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 188 DAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMI 239
+A FN+M + ++ ++ ++ G GR DD +L M R NVV+++V+I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 240 KGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK--- 292
+ K +L EA EL + M R D ++ +L+ GF + L++A ++ M K
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 293 -NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQ 351
N+ T+ ++ GY + ++ L++F K+ + +T T+ T++ +L LN ++
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSL-RGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 352 IHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFD--EGLLRQRDLISWNGMIAAYA 409
+ Q + + L++ GE A IF+ E + D+ +N +I
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 410 HHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
+ +A +LF + G + TY ++ G + E F K+
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 189/424 (44%), Gaps = 77/424 (18%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVV---------TWTALVNGYVKLNQIE 125
+L+ MIN + C RKL AM ++ T++ L+NG ++
Sbjct: 122 NLYTLSIMINCFCRC------RKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVS 175
Query: 126 EAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTII 177
EA L M E ++ + NT+++G +G+ +A+ L +M E N V++ ++
Sbjct: 176 EALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVL 235
Query: 178 KALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVR--- 230
+ + G+ A +M ER++K ++ ++DGL +G +D+A LF+ M ++
Sbjct: 236 NVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 231 -NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKL 285
N++++N++I G+ R D+ +L M +R ++ +++ L+ F++ G L AE+L
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 286 FHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACS 341
EM + + IT+T+++ G+ + ++A ++ + L PN TF
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD-LMVSKGCDPNIRTF-------- 406
Query: 342 DLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ--RDLI 399
+ LIN Y K + +F + LR D +
Sbjct: 407 ---------------------------NILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
++N +I + G A LF +M N VTY LL G E+ L+ F+K+
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Query: 460 LKNR 463
K++
Sbjct: 500 EKSK 503
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 178/394 (45%), Gaps = 25/394 (6%)
Query: 193 FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRL 248
F+ +R++ + GL ++ + DDA +LF M P+ V+ ++ + AK ++
Sbjct: 46 FSAFSDRNLSYRERLRSGL-VDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQY 104
Query: 249 DEALELFERMPER----DMPSWNTLVTGFIQNGDLNRA----EKLFHEMPQKNVITWTAM 300
D L L ++M + ++ + + ++ F + L A K+ + N IT++ +
Sbjct: 105 DLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTL 164
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL-GACSDLAGLN-EGQQIHQLISK 358
+ G G EAL++ +++ + KP+ T T++ G C L+G E + + +
Sbjct: 165 INGLCLEGRVSEALELVDRM-VEMGHKPDLITINTLVNGLC--LSGKEAEAMLLIDKMVE 221
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKE 416
Q + ++N+ K G+ +A + + R + D + ++ +I HG
Sbjct: 222 YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDN 281
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
A NLFN+M+ G N +TY L+ +AG ++G + ++K R I ++ L+
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK-RKINPNVVTFSVLI 340
Query: 477 DLCGRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKIEP 532
D + G+L+EA + + + G+ + L+ G C + ++V + K
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 533 ENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
N T+++L N Y + + + KM +G+
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGV 434
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 129/511 (25%), Positives = 243/511 (47%), Gaps = 63/511 (12%)
Query: 24 IINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHL----W 79
I +G+ LR+M+ L + N I+ LC+EGR+ + + M R L +
Sbjct: 256 IDDGFKLLRSMALK--GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313
Query: 80 GTMINGYIMCG-----VIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM 134
T+I GY G ++ A L G V+T+T+L++ K + A +M
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHG--LTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 135 PER----NVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRI 186
R N R++ T++DG+++ G +A + R M + +VV++N +I G++
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 187 EDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDA----RELFDRMPVRNVVSWNVM 238
EDA M+E+ DV S++T++ G + VD+A RE+ ++ + ++++ +
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 239 IKGYAKNRRLDEALELFERMPERDMP----SWNTLVTGFIQNGDLNRAEKLFHEMPQK-- 292
I+G+ + RR EA +L+E M +P ++ L+ + GDL +A +L +EM +K
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
Query: 293 --NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQ 350
+V+T++ ++ G + + EA ++ KL + ++ P+ T+ T++ CS++
Sbjct: 552 LPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIENCSNI------- 603
Query: 351 QIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR--DLISWNGMIAAY 408
E VVS LI + G + A ++F+ L + D ++N MI +
Sbjct: 604 ------------EFKSVVS-LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGH 650
Query: 409 AHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVR 468
G ++A L+ +M + GF + VT + L+ A G V E +L RS ++
Sbjct: 651 CRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL--RSCELS 708
Query: 469 EDHYA-CLVDLCGRAGRLKEAFNIIEGLGVD 498
E A LV++ R G + +++ + D
Sbjct: 709 EAEQAKVLVEINHREGNMDVVLDVLAEMAKD 739
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 191/416 (45%), Gaps = 31/416 (7%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLF 162
+V T+ L+ G+ I+ A LF +M + NV ++NT+IDGY + + + L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLL 263
Query: 163 RRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAIN 214
R M E N++S+N +I L GR+++ + +M R D ++ T++ G
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKE 323
Query: 215 GRVDDA----RELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMP----SW 266
G A E+ +V+++ +I K ++ A+E ++M R + ++
Sbjct: 324 GNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY 383
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
TLV GF Q G +N A ++ EM +V+T+ A++ G+ G E+A+ + ++
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK- 442
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+ L P+ ++ TVL ++E ++ + + + + T S+LI + +
Sbjct: 443 EKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK 502
Query: 383 IARRIFDEGLLR---QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
A +++E +LR D ++ +I AY G ++A+ L N+M E G + VTY L
Sbjct: 503 EACDLYEE-MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 440 LTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
+ + E + KL S+ + Y L++ C K ++I+G
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVP-SDVTYHTLIENCSNI-EFKSVVSLIKGF 615
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 203/463 (43%), Gaps = 66/463 (14%)
Query: 132 YEMPERNVRSWNTMIDGYARNGQTEKALDLFRR------MPERNVVSWNTIIKALSECGR 185
Y++ ++ ++ Y+R +KAL + MP V+S+N ++ A R
Sbjct: 127 YDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMP--GVLSYNAVLDATIRSKR 184
Query: 186 -IEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWN 236
I A+ F +M E V ++ ++ G G +D A LFD+M + NVV++N
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 237 VMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK 292
+I GY K R++D+ +L M E ++ S+N ++ G + G + + EM ++
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 293 ----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNE 348
+ +T+ ++ GY + G +AL + + H L P+ T+ +++ + +N
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 349 GQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF----DEGLLRQRDLISWNGM 404
+ + + + L++ +S+ G ++ A R+ D G ++++N +
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF--SPSVVTYNAL 421
Query: 405 IAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRS 464
I + G ++AI + M+E G + V+Y +L+ + V+E L+ ++++ +
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE-KG 480
Query: 465 IQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVA 524
I+ Y+ L+ R KEA ++ E
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYE------------------------------- 509
Query: 525 KKILKIE-PENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
++L++ P + TY+ L N Y G ++A + +M +KG+
Sbjct: 510 -EMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGV 551
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/453 (24%), Positives = 227/453 (50%), Gaps = 45/453 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLH----LWGTMINGYIMC-----GVIKEARKLF 99
NT ++ LC G++ DA L DRM E +G ++N +MC + E +
Sbjct: 197 NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLN--VMCKSGQTALAMELLRKM 254
Query: 100 DGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQT 155
+ + D V ++ +++G K ++ A LF EM + ++ ++NT+I G+ G+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 156 EKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTM 207
+ L R M +R NVV+++ +I + + G++ +A +M +R + ++ ++
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 208 VDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER-- 261
+DG R+++A ++ D M + +++++N++I GY K R+D+ LELF M R
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 262 --DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALK 315
+ ++NTLV GF Q+G L A+KLF EM + +++++ ++ G +G E+AL+
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALE 494
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
IF K++ ++ + G ++ ++ + + +++ + + + + +I+
Sbjct: 495 IFGKIEKSK-MELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISEL 553
Query: 376 SKCGELHIA----RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
+ L A R++ +EG D +++N +I A+ A L +M+ GF A
Sbjct: 554 CRKDSLSKADILFRKMTEEG--HAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611
Query: 432 NDVTYVELLTACSHAGLVEEGLQYFDKLLKNRS 464
DV+ V+++ +G +++ + D L R+
Sbjct: 612 -DVSTVKMVINMLSSGELDK--SFLDMLSTTRA 641
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/392 (19%), Positives = 177/392 (45%), Gaps = 21/392 (5%)
Query: 193 FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRL 248
F+ +R++ + GL + + DDA +LF M P+ V+ +N + AK ++
Sbjct: 46 FSTFSDRNLSYRDKLSSGL-VGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQY 104
Query: 249 DEALELFERMPERDMP----SWNTLVTGFIQNGDLNRA----EKLFHEMPQKNVITWTAM 300
+ L L ++M + + + + ++ F + L+ A K+ + + + + +
Sbjct: 105 ELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTL 164
Query: 301 MTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTA 360
+ G EAL++ +++ + KP T T++ +++ + + +T
Sbjct: 165 LNGLCLECRVSEALELVDRM-VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 361 FQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAI 418
FQ + ++N+ K G+ +A + + R + D + ++ +I G A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL 478
NLFN+M+ GF+A+ +TY L+ +AG ++G + ++K R I ++ L+D
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK-RKISPNVVTFSVLIDS 342
Query: 479 CGRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKIEPEN 534
+ G+L+EA +++ + G+ + + L+ G C + + ++V I K +
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 535 AGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
T+++L N Y + + + +M +G+
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGV 434
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 222/440 (50%), Gaps = 39/440 (8%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
T I L + +A L D+M +R DL +GT++NG G I A L +
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
K DVV + +++G K +++A LF EM + +R +++++I G+
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSD 311
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
A L M ER NVV+++ +I A + G++ +A+ +++M +R D+ +++++++
Sbjct: 312 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 371
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDM-- 263
G ++ R+D+A+ +F+ M + NVV+++ +IKG+ K +R++E +ELF M +R +
Sbjct: 372 GFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVG 431
Query: 264 --PSWNTLVTGFIQNGDLNRAEKLFHEM----PQKNVITWTAMMTGYVQHGLSEEALKIF 317
++ TL+ GF Q D + A+ +F +M N++T+ ++ G ++G +A+ +F
Sbjct: 432 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVF 491
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
LQ ++P+ T+ ++ + +G ++ +S + + +I+ + +
Sbjct: 492 EYLQR-STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCR 550
Query: 378 CGELHIA----RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
G A +++ ++G L ++N +I A G + + L +M+ GF A D
Sbjct: 551 KGSKEEADSLLKKMKEDGPLPNSG--TYNTLIRARLRDGDREASAELIKEMRSCGF-AGD 607
Query: 434 VTYVELLTACSHAGLVEEGL 453
+ + L+T H G +++
Sbjct: 608 ASTIGLVTNMLHDGRLDKSF 627
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/467 (23%), Positives = 221/467 (47%), Gaps = 47/467 (10%)
Query: 75 DLHLWGTMINGY-------IMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEA 127
DL+ + IN + + V+ + KL PD +VT ++L+NGY +I +A
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPD----IVTLSSLLNGYCHSKRISDA 172
Query: 128 ERLFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKA 179
L +M E + ++ T+I G + + +A+ L +M +R ++V++ T++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 180 LSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----N 231
L + G I+ A +M E DV + T++DGL +DDA LF M + +
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 232 VVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFH 287
V +++ +I R +A L M ER ++ +++ L+ F++ G L AEKL+
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 288 EMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDL 343
EM ++ ++ T+++++ G+ H +EA +F +L PN T+ T++
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF-ELMISKDCFPNVVTYSTLIKGFCKA 411
Query: 344 AGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDE--GLLRQRDLISW 401
+ EG ++ + +S+ +T + LI+ + + + A+ +F + + +++++
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 402 NGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL-L 460
N ++ +G +A+ +F +Q + + TY ++ AG VE+G + F L L
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531
Query: 461 KNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPL 507
K S V Y ++ R G +EA ++++ + D GPL
Sbjct: 532 KGVSPNVIA--YNTMISGFCRKGSKEEADSLLKKMKED------GPL 570
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/488 (22%), Positives = 215/488 (44%), Gaps = 73/488 (14%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLFR 163
+V + L++ K+N+ E L +M ++ +++ I+ + R Q AL +
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 164 RMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAING 215
+M E ++V+ ++++ RI DA +QM E D ++TT++ GL ++
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 216 RVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWN 267
+ +A L D+M R ++V++ ++ G K +D AL L ++M E D+ +N
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
T++ G + ++ A LF EM K +V T++++++ +G +A ++ + + +
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM-IE 321
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+ PN TF SALI+ + K G+L
Sbjct: 322 RKINPNVVTF-----------------------------------SALIDAFVKEGKLVE 346
Query: 384 ARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
A +++DE + R D+ +++ +I + H EA ++F M N VTY L+
Sbjct: 347 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIK 406
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEA---FNIIEGLGVD 498
A VEEG++ F + + R + Y L+ +A A F + +GV
Sbjct: 407 GFCKAKRVEEGMELF-REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 465
Query: 499 LSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGK----WK 552
++ + LL G +G +V + + + +EP+ TY+++ GK W+
Sbjct: 466 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD-IYTYNIMIEGMCKAGKVEDGWE 524
Query: 553 EAANVRMK 560
N+ +K
Sbjct: 525 LFCNLSLK 532
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 187/360 (51%), Gaps = 35/360 (9%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLF 162
D+VT+T+L+NGY N+IE+A LF ++ + NV ++ T+I +N A++LF
Sbjct: 152 DLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 163 RRM----PERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAIN 214
+M NVV++N ++ L E GR DA W M +R +V ++T ++D
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 215 GRVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERD--MPS--- 265
G++ +A+EL++ M +V ++ +I G LDEA ++F M ER+ P+
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM-ERNGCYPNEVI 330
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
+ TL+ GF ++ + K+F+EM QK N IT+T ++ GY G + A ++FN++
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 322 ADHALKPNTGTFVTVL-GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
+ A P+ T+ +L G C + + + I + + K + + +I K G+
Sbjct: 391 SRRA-PPDIRTYNVLLDGLCCN-GKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 381 LHIAR----RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
+ A +F +G+ + ++I++ MI+ + G EA +LF KM+E GF N+ Y
Sbjct: 449 VEDAFDLFCSLFSKGM--KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 156/309 (50%), Gaps = 53/309 (17%)
Query: 49 NTSISRLCQEGRIDDA----RKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
N ++ LC+ GR DA R + R E ++ + +I+ ++ G + EA++L++
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERN-----VRSWNTMIDGYARNGQTE 156
M DV T+ +L+NG ++EA ++FY M ERN + T+I G+ ++ + E
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM-ERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 157 KALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMV 208
+ +F M ++ N +++ +I+ GR + AQ FNQM R D++++ ++
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 209 DGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMP 264
DGL NG+V+ A +F+ M R N+V++ ++I+G K ++++A +LF
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC-------- 457
Query: 265 SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
LF + + NVIT+T M++G+ + GL EA +F K++ D
Sbjct: 458 -------------------SLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Query: 325 ALKPNTGTF 333
L PN +
Sbjct: 499 FL-PNESVY 506
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 188/399 (47%), Gaps = 42/399 (10%)
Query: 4 LPPL---SFILMHAPKLKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGR 60
+PPL I+MH L + P FL M + + ++ C R
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPC---RASCFLGKMMKL--GFEPDLVTFTSLLNGYCHWNR 168
Query: 61 IDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEARKLFD--GPDAMK-DVVTWTA 113
I+DA LFD++ + ++ + T+I + A +LF+ G + + +VVT+ A
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 114 LVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRMPER- 168
LV G ++ + +A L +M +R NV ++ +ID + + G+ +A +L+ M +
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 169 ---NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDAR 221
+V ++ ++I L G +++A+ F M +TT++ G + RV+D
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 222 ELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMP----SWNTLVTGF 273
++F M V N +++ V+I+GY R D A E+F +M R P ++N L+ G
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408
Query: 274 IQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
NG + +A +F M ++ N++T+T ++ G + G E+A +F L + +KPN
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSK-GMKPN 467
Query: 330 TGTFVTVLGACSDLAGLNEGQQIHQLISKTAF--QESTY 366
T+ T++ ++E + + + + F ES Y
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 96/459 (20%), Positives = 200/459 (43%), Gaps = 67/459 (14%)
Query: 137 RNVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKALSECGRIEDAQWH 192
R S+ ++ N Q ALDLF RM P +++ + ++ +++ R +
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 193 FNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRM------PVRNVVSWNVMIKGY 242
F QM+ + + ++ + ++ + A +M P ++V++ ++ GY
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEP--DLVTFTSLLNGY 163
Query: 243 AKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEM----PQKNV 294
R+++A+ LF+++ + ++ ++ TL+ +N LN A +LF++M + NV
Sbjct: 164 CHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNV 223
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
+T+ A++TG + G +A + + ++PN TF ++ A + L E ++++
Sbjct: 224 VTYNALVTGLCEIGRWGDAAWLLRDMM-KRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYG 414
++ + + + +LIN G L AR++F L +R+ N +I HG+
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMF---YLMERNGCYPNEVIYTTLIHGFC 339
Query: 415 K-----EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVRE 469
K + + +F +M + G AN +TY L+
Sbjct: 340 KSKRVEDGMKIFYEMSQKGVVANTITYTVLIQG--------------------------- 372
Query: 470 DHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK 529
CLV GR +E FN + + + LL G +G + ++ + + K
Sbjct: 373 ---YCLV---GRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRK 426
Query: 530 IEPE-NAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
E + N TY+++ +GK ++A ++ + KG+K
Sbjct: 427 REMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 52 ISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDAMK- 106
I C GR D A+++F++M R D+ + +++G G +++A +F+ +
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 107 --DVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALD 160
++VT+T ++ G KL ++E+A LF + + NV ++ TMI G+ R G +A
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 161 LFRRMPERNVVSWNTIIK 178
LF++M E + ++ K
Sbjct: 490 LFKKMKEDGFLPNESVYK 507
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/536 (22%), Positives = 256/536 (47%), Gaps = 45/536 (8%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFD---- 100
NT ++ L + G +D+ ++++ M E +++ + M+NGY G ++EA +
Sbjct: 187 NTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVE 246
Query: 101 -GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQT 155
G D D T+T+L+ GY + ++ A ++F EMP RN ++ +I G +
Sbjct: 247 AGLDP--DFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 156 EKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTM 207
++A+DLF +M + V ++ +IK+L R +A +M E +K ++T +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 208 VDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDM 263
+D L + + AREL +M + NV+++N +I GY K +++A+++ E M R +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 264 P----SWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALK 315
++N L+ G+ ++ ++++A + ++M ++ +V+T+ +++ G + G + A +
Sbjct: 425 SPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
+ + L D L P+ T+ +++ + + E + + + + + +ALI+ Y
Sbjct: 484 LLS-LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 376 SKCGELHIARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
K G++ A + ++ L + + +++N +I G KEA L KM ++G Q
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTV 602
Query: 434 VTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIE 493
T L+ G + F ++L + + + Y + R GRL +A +++
Sbjct: 603 STDTILIHRLLKDGDFDHAYSRFQQMLSSGT-KPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 494 GL---GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKI--LKIEPENAGTYSLLSNM 544
+ GV L + L+ G G + V K++ EP SL+ ++
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHL 717
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 223/515 (43%), Gaps = 61/515 (11%)
Query: 52 ISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDG---PDA 104
I LC R +A L M E ++H + +I+ ++AR+L
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALD 160
M +V+T+ AL+NGY K IE+A + M R N R++N +I GY ++ KA+
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMG 448
Query: 161 LFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLA 212
+ +M ER +VV++N++I G + A + M +R D ++T+M+D L
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 213 INGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERD-MP--- 264
+ RV++A +LFD + + NVV + +I GY K ++DEA + E+M ++ +P
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 265 SWNTLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKIFNKL 320
++N L+ G +G L A L +M Q V T T ++ ++ G + A F ++
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 321 QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
+ KP+ T+ T + L + + + + + + S+LI Y G+
Sbjct: 629 LSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQ 687
Query: 381 LHIA----RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKE------------------AI 418
+ A +R+ D G + ++ +I YGK+ +
Sbjct: 688 TNFAFDVLKRMRDTGCEPSQH--TFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVV 745
Query: 419 NLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDL 478
L KM E N +Y +L+ G + + FD + +N I E + L+
Sbjct: 746 ELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 479 CGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNV 513
C + + EA +++ D+ P L C V
Sbjct: 806 CCKLKKHNEAAKVVD----DMICVGHLPQLESCKV 836
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 225/490 (45%), Gaps = 41/490 (8%)
Query: 111 WTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRMP 166
+ L+N + ++E ++++ EM E N+ ++N M++GY + G E+A ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 167 ER----NVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVD 218
E + ++ ++I + ++ A FN+M R+ ++T ++ GL + R+D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 219 DARELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLV 270
+A +LF +M V ++ V+IK + R EAL L + M E ++ ++ L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 271 TGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
+A +L +M +K NVIT+ A++ GY + G+ E+A+ + +L L
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRKL 424
Query: 327 KPNTGTFVTVL-GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
PNT T+ ++ G C G L K TY ++LI+ + G A
Sbjct: 425 SPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTY--NSLIDGQCRSGNFDSAY 482
Query: 386 RIFDEGLLRQRDLI----SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
R+ L+ R L+ ++ MI + +EA +LF+ +++ G N V Y L+
Sbjct: 483 RLL--SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVD 498
AG V+E +K+L + A + LC G+LKEA + E + G+
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD-GKLKEATLLEEKMVKIGLQ 599
Query: 499 LSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGKWKEAAN 556
++S L+ G+ D +++L +P+ A TY+ Y G+ +A +
Sbjct: 600 PTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD-AHTYTTFIQTYCREGRLLDAED 658
Query: 557 VRMKMKDKGL 566
+ KM++ G+
Sbjct: 659 MMAKMRENGV 668
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 194/425 (45%), Gaps = 56/425 (13%)
Query: 201 VKSWTTMVDGLAINGRVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFE 256
+ + T+++ LA G VD+ ++++ M N+ ++N M+ GY K ++EA +
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 257 RMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHG 308
++ E D ++ +L+ G+ Q DL+ A K+F+EMP ++N + +T ++ G
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 309 LSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVV 368
+EA+ +F K++ D P T+ ++ + +E + + + +T + + +
Sbjct: 303 RIDEAMDLFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTY 361
Query: 369 SALINMYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQE 426
+ LI+ + AR + + L + ++I++N +I Y G ++A+++ M+
Sbjct: 362 TVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMES 421
Query: 427 LGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSI------------QVREDH--- 471
N TY EL+ + V + + +K+L+ + + Q R +
Sbjct: 422 RKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480
Query: 472 -------------------YACLVDLCGRAGRLKEA---FNIIEGLGVDLSLSVWGPLLA 509
Y ++D ++ R++EA F+ +E GV+ ++ ++ L+
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 510 GCNVHGNADIGKLVAKKIL-KIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKK 568
G G D L+ +K+L K N+ T++ L + + GK KEA + KM GL
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL-- 598
Query: 569 QPGCS 573
QP S
Sbjct: 599 QPTVS 603
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/327 (21%), Positives = 138/327 (42%), Gaps = 54/327 (16%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGT----MINGYIMCGVIKEARKLFD---G 101
N I LC +G++ +A L ++M + L + +I+ + G A F
Sbjct: 571 NALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLS 630
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
D T+T + Y + ++ +AE + +M E V +++++I GY GQT
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 158 ALDLFRRM----PERNVVSWNTIIK------------------ALSECGRIEDAQWHFNQ 195
A D+ +RM E + ++ ++IK A+S + +
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEK 750
Query: 196 MRERDV----KSWTTMVDGLAINGRVDDARELFDRMPVRNVVS-----WNVMIKGYAKNR 246
M E V KS+ ++ G+ G + A ++FD M +S +N ++ K +
Sbjct: 751 MVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLK 810
Query: 247 RLDEALELFERM------PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ----KNVIT 296
+ +EA ++ + M P+ + S L+ G + G+ R +F + Q ++ +
Sbjct: 811 KHNEAAKVVDDMICVGHLPQ--LESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELA 868
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQAD 323
W ++ G + GL E ++FN ++ +
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVMEKN 895
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 131/561 (23%), Positives = 252/561 (44%), Gaps = 62/561 (11%)
Query: 50 TSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCG-------VIKEARKL 98
T + +C G +D A + M ++ ++ T+I ++ V+KE ++
Sbjct: 422 TVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Query: 99 FDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQ 154
PD + + +L+ G K +++EA EM E N ++ I GY +
Sbjct: 482 GIAPD----IFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 155 TEKALDLFRRMPE----RNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTT 206
A + M E N V +I + G++ +A + M ++ D K++T
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597
Query: 207 MVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERD 262
+++GL N +VDDA E+F M + +V S+ V+I G++K + +A +F+ M E
Sbjct: 598 LMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEG 657
Query: 263 MPS----WNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEAL 314
+ +N L+ GF ++G++ +A++L EM K N +T+ ++ GY + G EA
Sbjct: 658 LTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
++F++++ L P++ + T++ C L + I +K ST +ALIN
Sbjct: 718 RLFDEMKL-KGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINW 775
Query: 375 YSKCG----ELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELG 428
K G + + R+ D R + + +++N MI G + A LF++MQ
Sbjct: 776 VFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNAN 835
Query: 429 FQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDH--YACLVDLCGRAGRLK 486
+TY LL G E FD+ + + + DH Y+ +++ + G
Sbjct: 836 LMPTVITYTSLLNGYDKMGRRAEMFPVFDEAI---AAGIEPDHIMYSVIINAFLKEGMTT 892
Query: 487 EAFNIIEGL--------GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIE--PENAG 536
+A +++ + G LS+S LL+G G ++ + V + +++++ P++A
Sbjct: 893 KALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSAT 952
Query: 537 TYSLLSNMYASVGKWKEAANV 557
L++ S + EA V
Sbjct: 953 VIELINESCISSNQRVEADAV 973
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 107/485 (22%), Positives = 210/485 (43%), Gaps = 57/485 (11%)
Query: 52 ISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKD 107
I LC+ R++DA+ L M D H + +I+G + + R + +
Sbjct: 284 IDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL------KGRNADAAKGLVHE 337
Query: 108 VVTWTALVNGYV---------KLNQIEEAERLFYEMPERNV----RSWNTMIDGYARNGQ 154
+V+ + Y+ K +E+A+ LF M + +++ ++I+GY R
Sbjct: 338 MVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 155 TEKALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRER-------DVKS 203
+ +L M +RN+V ++ T++K + G ++ A +N ++E +V
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGA---YNIVKEMIASGCRPNVVI 454
Query: 204 WTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMP 259
+TT++ N R DA + M + ++ +N +I G +K +R+DEA M
Sbjct: 455 YTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMV 514
Query: 260 ERDMP----SWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTG----YVQHGLSE 311
E + ++ ++G+I+ + A+K EM + V+ + TG Y + G
Sbjct: 515 ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVI 574
Query: 312 EALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
EA + + D + + T+ ++ +++ ++I + + + L
Sbjct: 575 EACSAYRSM-VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633
Query: 372 INMYSKCGELHIARRIFD----EGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL 427
IN +SK G + A IFD EGL ++I +N ++ + G ++A L ++M
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGL--TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Query: 428 GFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKE 487
G N VTY ++ +G + E + FD+ +K + + Y LVD C R ++
Sbjct: 692 GLHPNAVTYCTIIDGYCKSGDLAEAFRLFDE-MKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 488 AFNII 492
A I
Sbjct: 751 AITIF 755
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 130/626 (20%), Positives = 265/626 (42%), Gaps = 118/626 (18%)
Query: 55 LCQEGRIDDARKLFDRMPER-----------------------DLHLWGTMINGYIMCGV 91
LC G + A + +RM ER D L+G + +GYI G
Sbjct: 107 LCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILFDGYIAKGY 166
Query: 92 IKEARKLFD---GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERN----VRSWNT 144
I+EA +F G + + + L++ ++ N+++ ++ M ERN V++++
Sbjct: 167 IEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHM 226
Query: 145 MIDGYARNG----------QTEK-----------ALDLFRRMPERNVV----SWNTIIKA 179
+I + R G +TEK AL L M + +V +++ +I
Sbjct: 227 LIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDG 286
Query: 180 LSECGRIEDAQWHFNQMRERDVK----SWTTMVDGL-------------------AIN-- 214
L + R+EDA+ +M V +++ ++DGL IN
Sbjct: 287 LCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIK 346
Query: 215 --------------GRVDDARELFDRMPVRNVV----SWNVMIKGYAKNRRLDEALELFE 256
G ++ A+ LFD M ++ ++ +I+GY + + + + EL
Sbjct: 347 PYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLV 406
Query: 257 RMPERDMP----SWNTLVTGFIQNGDLNRAEKLFHEM----PQKNVITWTAMMTGYVQHG 308
M +R++ ++ T+V G +GDL+ A + EM + NV+ +T ++ ++Q+
Sbjct: 407 EMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNS 466
Query: 309 LSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVV 368
+A+++ +++ + + P+ + +++ S ++E + + + + + +
Sbjct: 467 RFGDAMRVLKEMK-EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 369 SALINMYSKCGELHIARRIFDE----GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKM 424
A I+ Y + E A + E G+L + L + G+I Y G EA + + M
Sbjct: 526 GAFISGYIEASEFASADKYVKEMRECGVLPNKVLCT--GLINEYCKKGKVIEACSAYRSM 583
Query: 425 QELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGR 484
+ G + TY L+ V++ + F + ++ + I Y L++ + G
Sbjct: 584 VDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF-REMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 485 LKEAFNIIEGL---GVDLSLSVWGPLLAGCNVHGNADIGK-LVAKKILKIEPENAGTYSL 540
+++A +I + + G+ ++ ++ LL G G + K L+ + +K NA TY
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 541 LSNMYASVGKWKEAANVRMKMKDKGL 566
+ + Y G EA + +MK KGL
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGL 728
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 155/329 (47%), Gaps = 44/329 (13%)
Query: 14 APKLKTHPTFIINGYPFLRTMSTSTSSLHSAMKD--------CNTSISRLCQEGRIDDAR 65
AP + ++ +ING+ L M ++S +++ N + C+ G I+ A+
Sbjct: 624 APDVFSYGV-LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAK 682
Query: 66 KLFDRMPERDLH----LWGTMINGYIMCGVIKEARKLFDG---PDAMKDVVTWTALVNGY 118
+L D M + LH + T+I+GY G + EA +LFD + D +T LV+G
Sbjct: 683 ELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC 742
Query: 119 VKLNQIEEAERLFYEMPERNVRS---WNTMIDGYARNGQTEKALDL--------FRRMPE 167
+LN +E A +F + S +N +I+ + G+TE ++ F R +
Sbjct: 743 CRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGK 802
Query: 168 RNVVSWNTIIKALSECGRIEDAQWHFNQMRERD----VKSWTTMVDGLAINGRVDDAREL 223
N V++N +I L + G +E A+ F+QM+ + V ++T++++G GR + +
Sbjct: 803 PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 224 FDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPERD---------MPSWNTLV 270
FD + + ++V+I + K +AL L ++M ++ + + L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVITWTA 299
+GF + G++ AEK+ M + I +A
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSA 951
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 221/467 (47%), Gaps = 46/467 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
N I +C+EG ++ AR LF+ M R D + +MI+G+ G + + F+
Sbjct: 266 NIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 325
Query: 105 M---KDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEK 157
M DV+T+ AL+N + K ++ + EM + NV S++T++D + + G ++
Sbjct: 326 MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQ 385
Query: 158 ALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVD 209
A+ + M +V ++ ++I A + G + DA N+M E +V ++T ++D
Sbjct: 386 AIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALID 445
Query: 210 GLAINGRVDDARELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPER---- 261
GL R+ +A ELF +M + N+ S+N +I G+ K + +D ALEL + R
Sbjct: 446 GLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKP 505
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ----KNVITWTAMMTGYVQHGLSEEALKIF 317
D+ + T + G + A+ + +EM + N + +T +M Y + G E L +
Sbjct: 506 DLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLL 565
Query: 318 NKLQADHALKPNTGTFVTVL-GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
++++ + ++ TF ++ G C + +++ + Q + + +A+I+
Sbjct: 566 DEMK-ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC 624
Query: 377 KCGELHIARRIFDE----GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
K ++ A +F++ GL+ R ++ ++ G EA+ L +KM E+G + +
Sbjct: 625 KDNQVEAATTLFEQMVQKGLVPDR--TAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKN-------RSIQVREDHY 472
+ Y L+ SH +++ + ++++ I V + HY
Sbjct: 683 LLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHY 729
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/474 (21%), Positives = 205/474 (43%), Gaps = 90/474 (18%)
Query: 46 KDCNTSISRLCQEGRIDDARKLFDRM----PERDLHLWGTMINGYIMCGVIKEARKLFDG 101
+ CN + R + G+ DD ++ F M + + MI+ G ++ AR LF+
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287
Query: 102 PD---AMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQ 154
+ D VT+ ++++G+ K+ ++++ F EM E +V ++N +I+ + + G+
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347
Query: 155 TEKALDLFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDV----KSWTT 206
L+ +R M + NVVS++T++ A + G ++ A + MR + ++T+
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407
Query: 207 MVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERD 262
++D G + DA L + M NVV++ +I G R+ EA ELF +M
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD--- 464
Query: 263 MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
G I N + ++ A++ G+V+ + AL++ N+L+
Sbjct: 465 -------TAGVIPN-----------------LASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 323 DHALKPNT---GTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
+KP+ GTF+ G CS E ++N +CG
Sbjct: 501 -RGIKPDLLLYGTFI--WGLCS--------------------LEKIEAAKVVMNEMKECG 537
Query: 380 ELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
++ LI + ++ AY G E ++L ++M+EL + VT+ L
Sbjct: 538 -------------IKANSLI-YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 440 LTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIE 493
+ LV + + YF+++ + +Q + ++D + +++ A + E
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFE 637
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 178/387 (45%), Gaps = 46/387 (11%)
Query: 27 GYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGY 86
G F R M + L + +T + C+EG + A K + D+ G + N Y
Sbjct: 351 GLEFYREMKGN--GLKPNVVSYSTLVDAFCKEGMMQQAIKFY-----VDMRRVGLVPNEY 403
Query: 87 IMCGVIKEARKLFDGPDAMK------------DVVTWTALVNGYVKLNQIEEAERLFYEM 134
+I K+ + DA + +VVT+TAL++G +++EAE LF +M
Sbjct: 404 TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKM 463
Query: 135 PER----NVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRI 186
N+ S+N +I G+ + ++AL+L + R + + + T I L +I
Sbjct: 464 DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKI 523
Query: 187 EDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVRN----VVSWNVM 238
E A+ N+M+E +K+ +TT++D +G + L D M + VV++ V+
Sbjct: 524 EAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVL 583
Query: 239 IKGYAKNRRLDEALELFERMP-----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKN 293
I G KN+ + +A++ F R+ + + + ++ G ++ + A LF +M QK
Sbjct: 584 IDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKG 643
Query: 294 VI----TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG 349
++ +T++M G + G EAL + +K+ A+ +K + + +++ S L +
Sbjct: 644 LVPDRTAYTSLMDGNFKQGNVLEALALRDKM-AEIGMKLDLLAYTSLVWGLSHCNQLQKA 702
Query: 350 QQ-IHQLISKTAFQESTYVVSALINMY 375
+ + ++I + + +S L Y
Sbjct: 703 RSFLEEMIGEGIHPDEVLCISVLKKHY 729
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 193/395 (48%), Gaps = 40/395 (10%)
Query: 75 DLHLWGTMINGYIMC-------GVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEA 127
DL+ + +IN + C ++ + KL PD VT +LVNG+ + N++ +A
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDR----VTIGSLVNGFCRRNRVSDA 174
Query: 128 ERLFYEMPE----RNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKA 179
L +M E ++ ++N +ID + + A D F+ + + NVV++ ++
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 180 LSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVR----- 230
L R DA + M ++ +V +++ ++D NG+V +A+ELF+ M VR
Sbjct: 235 LCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSIDP 293
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLF 286
++V+++ +I G + R+DEA ++F+ M + D+ S+NTL+ GF + + KLF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 287 HEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
EM Q+ N +T+ ++ G+ Q G ++A + F+++ + P+ T+ +LG D
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDF-FGISPDIWTYNILLGGLCD 412
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLIS 400
L + I + + K + +I K G++ A +F L+ + D+++
Sbjct: 413 NGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVT 472
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
+ M++ G E L+ KM++ G ND T
Sbjct: 473 YTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 122 bits (307), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 160/312 (51%), Gaps = 35/312 (11%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLH----LWGTMINGYIMCGVIKEARKLFDGPDA 104
N I LC+ R++DA F + + + + ++NG +A +L D
Sbjct: 194 NAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL--SDM 251
Query: 105 MK-----DVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQT 155
+K +V+T++AL++ +VK ++ EA+ LF EM + ++ +++++I+G + +
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 156 EKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKS----WTTM 207
++A +F M + +VVS+NT+I + R+ED F +M +R + S + T+
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 208 VDGLAINGRVDDARELFDRMPVRNVV----SWNVMIKGYAKNRRLDEALELFERMPER-- 261
+ G G VD A+E F +M + ++N+++ G N L++AL +FE M +R
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 262 --DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALK 315
D+ ++ T++ G + G + A LF + K +++T+T MM+G GL E
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Query: 316 IFNKLQADHALK 327
++ K++ + +K
Sbjct: 492 LYTKMKQEGLMK 503
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 148/284 (52%), Gaps = 30/284 (10%)
Query: 57 QEGRIDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDVV 109
+ G++ +A++LF+ M + D+ + ++ING + I EA ++FD + DVV
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331
Query: 110 TWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRM 165
++ L+NG+ K ++E+ +LF EM +R N ++NT+I G+ + G +KA + F +M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Query: 166 P----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRV 217
++ ++N ++ L + G +E A F M++R D+ ++TT++ G+ G+V
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451
Query: 218 DDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGF 273
++A LF + ++ ++V++ M+ G L E L+ +M + + + ++
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS-- 509
Query: 274 IQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIF 317
+GD+ + +L +M + + ++ G+ ++AL +
Sbjct: 510 --DGDITLSAELIKKMLS---CGYAPSLLKDIKSGVCKKALSLL 548
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 104/482 (21%), Positives = 211/482 (43%), Gaps = 74/482 (15%)
Query: 119 VKLNQIEEAERLFYEM----PERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNV 170
+KLN +A LF +M P ++ +N ++ + + + + L ++M ++
Sbjct: 64 IKLN---DAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120
Query: 171 VSWNTIIKALSECGRIEDAQWHFNQM----RERDVKSWTTMVDGLAINGRVDDARELFDR 226
++N +I C ++ A +M E D + ++V+G RV DA L D+
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 227 M------PVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQN 276
M P ++V++N +I K +R+++A + F+ + + ++ ++ LV G +
Sbjct: 181 MVEIGYKP--DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNS 238
Query: 277 GDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGT 332
+ A +L +M +K NVIT++A++ +V++G EA ++F ++ ++ P+ T
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSIDPDIVT 297
Query: 333 FVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL 392
+ +++ ++E Q+ L M SK G
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDL------------------MVSK-------------GC 326
Query: 393 LRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
L D++S+N +I + ++ + LF +M + G +N VTY L+ AG V++
Sbjct: 327 LA--DVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 453 LQYFDKLLKNRSIQVREDHYACLVDLCGRA--GRLKEAFNIIEGLG---VDLSLSVWGPL 507
++F ++ + D + + L G G L++A I E + +DL + + +
Sbjct: 385 QEFFSQM---DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 508 LAG-CNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
+ G C + L LK + TY+ + + + G E + KMK +GL
Sbjct: 442 IRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Query: 567 KK 568
K
Sbjct: 502 MK 503
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 198/415 (47%), Gaps = 37/415 (8%)
Query: 73 ERDLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDVVTWTALVNGYVKLNQIEEAER 129
E D + T+I G + G + EA L D DVVT+ ++VNG + A
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214
Query: 130 LFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALS 181
L +M ERNV+ +++T+ID R+G + A+ LF+ M + +VV++N++++ L
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 182 ECGRIEDAQWHFNQMRERD----VKSWTTMVDGLAINGRVDDARELFDRMPVR----NVV 233
+ G+ D M R+ V ++ ++D G++ +A EL+ M R N++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 234 SWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEM 289
++N ++ GY RL EA + + M D+ ++ +L+ G+ ++ K+F +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 290 PQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAG 345
++ N +T++ ++ G+ Q G + A ++F ++ H + P+ T+ +L D
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM-VSHGVLPDVMTYGILLDGLCDNGK 453
Query: 346 LNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLISWNG 403
L + +I + + K+ + + +I K G++ A +F + + +++++
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 404 MIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTA-------CSHAGLVEE 451
MI+ G EA L KM+E G ND TY L+ A + A L+EE
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 194/412 (47%), Gaps = 40/412 (9%)
Query: 75 DLHLWGTMINGYIMC-------GVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEA 127
+++ MIN + C V+ + KL PD T+ L+ G ++ EA
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDT----TTFNTLIKGLFLEGKVSEA 177
Query: 128 ERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRMPERN----VVSWNTIIKA 179
L M E +V ++N++++G R+G T ALDL R+M ERN V +++TII +
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 180 LSECGRIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDA----RELFDRMPVRN 231
L G I+ A F +M + +KS + ++V GL G+ +D +++ R V N
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 232 VVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFH 287
V+++NV++ + K +L EA EL++ M R ++ ++NTL+ G+ L+ A +
Sbjct: 298 VITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLD 357
Query: 288 EMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF-VTVLGACSD 342
M + +++T+T+++ GY ++ +K+F + + L N T+ + V G C
Sbjct: 358 LMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI-SKRGLVANAVTYSILVQGFCQS 416
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDL--IS 400
+ +++ Q + L++ G+L A IF++ + DL +
Sbjct: 417 -GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVM 475
Query: 401 WNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
+ +I G ++A NLF + G + N +TY +++ G + E
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 142/260 (54%), Gaps = 27/260 (10%)
Query: 57 QEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDVV 109
+EG++ +A +L+ M R ++ + T+++GY M + EA + D D+V
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 110 TWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRM 165
T+T+L+ GY + ++++ ++F + +R N +++ ++ G+ ++G+ + A +LF+ M
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 166 PER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERD----VKSWTTMVDGLAINGRV 217
+V+++ ++ L + G++E A F +++ + +TT+++G+ G+V
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 218 DDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER-DMP---SWNTL 269
+DA LF +P + NV+++ VMI G K L EA L +M E + P ++NTL
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 270 VTGFIQNGDLNRAEKLFHEM 289
+ +++GDL + KL EM
Sbjct: 550 IRAHLRDGDLTASAKLIEEM 569
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 110/486 (22%), Positives = 213/486 (43%), Gaps = 41/486 (8%)
Query: 114 LVNGYVKLNQIEEAERLFYEM----PERNVRSWNTMIDGYARNGQTEKALDLFRRMP--- 166
L +G V + + ++A LF EM P ++ ++ AR Q LD +++
Sbjct: 60 LRSGIVDIKK-DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118
Query: 167 -ERNVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDAR 221
N+ + N +I C + A ++ E D ++ T++ GL + G+V +A
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAV 178
Query: 222 ELFDRMPVRN-----VVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTG 272
L DRM V N VV++N ++ G ++ AL+L +M ER D+ +++T++
Sbjct: 179 VLVDRM-VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 273 FIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKP 328
++G ++ A LF EM K +V+T+ +++ G + G + + + + P
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM-VSREIVP 296
Query: 329 NTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
N TF +L L E ++++ + + + L++ Y L A +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 389 DEGLLRQR---DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
D ++R + D++++ +I Y + + +F + + G AN VTY L+
Sbjct: 357 DL-MVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQ 415
Query: 446 AGLVEEGLQYFDKLLKNRSIQVRED--HYACLVDLCGRAGRLKEAFNIIEGL---GVDLS 500
+G ++ + F +++ S V D Y L+D G+L++A I E L +DL
Sbjct: 416 SGKIKLAEELFQEMV---SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLG 472
Query: 501 LSVWGPLLAG-CNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRM 559
+ ++ ++ G C D L K N TY+++ + G EA +
Sbjct: 473 IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR 532
Query: 560 KMKDKG 565
KM++ G
Sbjct: 533 KMEEDG 538
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 198/443 (44%), Gaps = 67/443 (15%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDG--- 101
N+ ++ C RI DA L +M E D + T+I+G EA L D
Sbjct: 155 NSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV 214
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEK 157
D+VT+ +VNG K I+ A L +M E V +NT+ID
Sbjct: 215 KGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVND 274
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
AL+LF M + NVV++N++I+ L GR DA + M ER +V +++ ++D
Sbjct: 275 ALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALID 334
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERD--- 262
G++ +A +L+D M R ++ +++ +I G+ + RLDEA +FE M +D
Sbjct: 335 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 394
Query: 263 -MPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIF 317
+ ++NTL+ GF + ++ +LF EM Q+ N +T+T ++ G+ Q + A +F
Sbjct: 395 NVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 318 NKLQADHALKPNTGTFVTVL-GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
++ +D L P+ T+ +L G C N G+ L+ Q S
Sbjct: 455 KQMVSDGVL-PDIMTYSILLDGLC------NNGKVETALVVFEYLQRSKM---------- 497
Query: 377 KCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
+ D+ ++N MI G ++ +LF + G + N VTY
Sbjct: 498 ------------------EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 437 VELLTACSHAGLVEEGLQYFDKL 459
+++ GL EE F ++
Sbjct: 540 TTMMSGFCRKGLKEEADALFREM 562
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/440 (24%), Positives = 215/440 (48%), Gaps = 39/440 (8%)
Query: 49 NTSISRLCQEGRIDDARKLFDRM----PERDLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
NT I L + R +A L DRM + DL +G ++NG G I A L +
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
K VV + +++ + +A LF EM + +R ++N++I G+
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
A L M ER NVV+++ +I A + G++ +A+ +++M +R D+ +++++++
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDM-- 263
G ++ R+D+A+ +F+ M + NVV++N +IKG+ K +R+DE +ELF M +R +
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 264 --PSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI----TWTAMMTGYVQHGLSEEALKIF 317
++ TL+ GF Q + + A+ +F +M V+ T++ ++ G +G E AL +F
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
LQ ++P+ T+ ++ + +G + +S + + + +++ + +
Sbjct: 490 EYLQRSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCR 548
Query: 378 CGELHIARRIF----DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
G A +F +EG L D ++N +I A+ G + L +M+ F D
Sbjct: 549 KGLKEEADALFREMKEEGPL--PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGD 605
Query: 434 VTYVELLTACSHAGLVEEGL 453
+ + L+T H G +++
Sbjct: 606 ASTIGLVTNMLHDGRLDKSF 625
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 167/385 (43%), Gaps = 32/385 (8%)
Query: 216 RVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWN 267
++DDA LF M P ++V ++ ++ AK + D + L E+M ++ +++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 268 TLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
L+ F + L+ A + +M + +++T +++ G+ +A+ + ++ +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM-VE 179
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+P++ TF T++ +E + + Q ++N K G++ +
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 384 ARRIF---DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
A + ++G + + ++ +N +I A ++ +A+NLF +M G + N VTY L+
Sbjct: 240 ALSLLKKMEQGKI-EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 298
Query: 441 TACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GV 497
+ G + + +++ R I ++ L+D + G+L EA + + + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 498 DLSLSVWGPLLAGCNVHGNADIGK-LVAKKILKIEPENAGTYSLLSNMYASVGKWKEAAN 556
D + + L+ G +H D K + I K N TY+ L + + E
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 557 VRMKMKDKGLKKQPGCSWVEVGNTV 581
+ +M +GL VGNTV
Sbjct: 418 LFREMSQRGL----------VGNTV 432
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 204/427 (47%), Gaps = 69/427 (16%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
T I L + +A L DRM +R +L +G ++NG G A L + +A
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
K DVV + +++ K +++A LF EM + +R +++++I G+
Sbjct: 254 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 313
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
A L M E+ N+V++N +I A + G+ +A+ ++ M +R D+ ++ ++V+
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Query: 210 GLAINGRVDDARELFDRMPVRN----VVSWNVMIKGYAKNRRLDEALELFERMPER---- 261
G ++ R+D A+++F+ M ++ VV++N +IKG+ K++R+++ ELF M R
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIF 317
D ++ TL+ G +GD + A+K+F +M +++T++ ++ G +G E+AL++F
Sbjct: 434 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 493
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
+ +Q K+ + Y+ + +I K
Sbjct: 494 DYMQ------------------------------------KSEIKLDIYIYTTMIEGMCK 517
Query: 378 CGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
G++ +F L+ + +++++N MI+ +EA L KM+E G N T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 436 YVELLTA 442
Y L+ A
Sbjct: 578 YNTLIRA 584
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/507 (22%), Positives = 232/507 (45%), Gaps = 35/507 (6%)
Query: 92 IKEARKLFDG---PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNV----RSWNT 144
+ +A LF G + +V + L++ K+ + + L +M + ++N
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 145 MIDGYARNGQTEKALDLFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER- 199
+I+ + R Q AL L +M E ++V+ ++++ RI DA +QM E
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 200 ---DVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEAL 252
D ++TT++ GL ++ + +A L DRM R N+V++ V++ G K D AL
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 253 ELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGY 304
L +M E D+ +NT++ + ++ A LF EM K NV+T++++++
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQES 364
+G +A ++ + + + + PN TF ++ A E ++++ + K +
Sbjct: 306 CSYGRWSDASQLLSDM-IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 365 TYVVSALINMYSKCGELHIARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLFN 422
+ ++L+N + L A+++F+ + + D++++N +I + ++ LF
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD-LC-- 479
+M G + VTY L+ H G + + F +++ + + Y+ L+D LC
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNN 483
Query: 480 GRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKIEPENAGTY 538
G+ + E F+ ++ + L + ++ ++ G G D G L LK N TY
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543
Query: 539 SLLSNMYASVGKWKEAANVRMKMKDKG 565
+ + + S +EA + KMK+ G
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDG 570
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 76/264 (28%)
Query: 46 KDC-------NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL 98
KDC NT I C+ R++D +LF M R L
Sbjct: 394 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGL---------------------- 431
Query: 99 FDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQ 154
+ D VT+T L+ G + A+++F +M ++ +++ ++DG NG+
Sbjct: 432 ------VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 485
Query: 155 TEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDG 210
EKAL++F M + ++ + T+I+ + + G+++D F + + VK
Sbjct: 486 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP------- 538
Query: 211 LAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMP-----S 265
NVV++N MI G R L EA L ++M E D P +
Sbjct: 539 --------------------NVVTYNTMISGLCSKRLLQEAYALLKKMKE-DGPLPNSGT 577
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEM 289
+NTL+ +++GD + +L EM
Sbjct: 578 YNTLIRAHLRDGDKAASAELIREM 601
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 167/373 (44%), Gaps = 28/373 (7%)
Query: 216 RVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERD----MPSWN 267
++DDA LF M P+ ++V +N ++ AK ++ D + L E+M + + ++N
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 268 TLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
L+ F + ++ A L +M + +++T ++++ GY +A+ + +++ +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VE 183
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+P+T TF T++ +E + + + Q + ++N K G+ +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 384 ARRIFD--EGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
A + + E + D++ +N +I + + + +A+NLF +M+ G + N VTY L++
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVD 498
G + Q +++ + I + L+D + G+ EA + + + +D
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 499 LSLSVWGPLLAGCNVHGNADIGK-----LVAKKILKIEPENAGTYSLLSNMYASVGKWKE 553
+ + L+ G +H D K +V+K + TY+ L + + ++
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF----PDVVTYNTLIKGFCKSKRVED 418
Query: 554 AANVRMKMKDKGL 566
+ +M +GL
Sbjct: 419 GTELFREMSHRGL 431
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 230/488 (47%), Gaps = 60/488 (12%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEKAL- 159
M V+T+ +++ K +E ++++ EM RN+ ++N +I+G+++NG+ E+A
Sbjct: 235 MPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 160 ---DLFRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDV----KSWTTMVDGLA 212
D+ R S+N +I+ + G +DA ++M + ++ + L
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354
Query: 213 INGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PS---WNT 268
GR+DDAREL M +VVS+N ++ GY K + EA LF+ + D+ PS +NT
Sbjct: 355 DFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNT 414
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
L+ G ++G+L A++L EM + +VIT+T ++ G+V++G A ++++++
Sbjct: 415 LIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM-LRK 473
Query: 325 ALKPNTGTFVTVLGACSDLAGLNEGQQIH-QLISKTAFQESTYVVSALINMYSKCGEL-- 381
+KP+ + T L ++ ++H ++++ + + I+ K G L
Sbjct: 474 GIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVK 533
Query: 382 --HIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVEL 439
R+IF GL+ D +++ +I Y +G K A NL+++M + +TY L
Sbjct: 534 AIEFQRKIFRVGLV--PDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVL 591
Query: 440 LTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDL 499
+ + AG +E+ QY ++ K H A L +C +AG + EA+ +
Sbjct: 592 IYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC-KAGNIDEAYRYL------- 643
Query: 500 SLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRM 559
C K+ + I P N +Y++L + KW+E +
Sbjct: 644 -----------C---------KMEEEGI----PPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 560 KMKDKGLK 567
+M DK ++
Sbjct: 680 EMLDKEIE 687
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 169/368 (45%), Gaps = 31/368 (8%)
Query: 39 SSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL 98
+ ++ N I LC GRIDDAR+L M D+ + T+++GYI G EA L
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLL 396
Query: 99 FD---GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYAR 151
FD D +VT+ L++G + +E A+RL EM + +V ++ T++ G+ +
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Query: 152 NGQTEKALDLFRRMPERNVV--SWNTIIKALSECGRIEDAQWHFNQMRER--------DV 201
NG A +++ M + + + +A+ E R+ D+ F E D+
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL-RLGDSDKAFRLHEEMVATDHHAPDL 515
Query: 202 KSWTTMVDGLAINGRVDDA----RELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFER 257
+ +DGL G + A R++F V + V++ +I+GY +N + A L++
Sbjct: 516 TIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDE 575
Query: 258 M-PERDMPS---WNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGL 309
M +R PS + L+ G + G L +A + EM ++ NV+T A++ G + G
Sbjct: 576 MLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGN 635
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS 369
+EA + K++ + + PN ++ ++ D E ++++ + + Y
Sbjct: 636 IDEAYRYLCKME-EEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHR 694
Query: 370 ALINMYSK 377
AL K
Sbjct: 695 ALFKHLEK 702
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 184/429 (42%), Gaps = 45/429 (10%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDL----HLWGTMINGYIMCGVIKEARKLFD---G 101
N I+ + G++++AR+ M + + +I GY G+ +A + D
Sbjct: 277 NILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLN 336
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDL 161
T+ + +I++A L M +V S+NT++ GY + G+ +A L
Sbjct: 337 AGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLL 396
Query: 162 FRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAI 213
F + ++V++NT+I L E G +E AQ +M + DV ++TT+V G
Sbjct: 397 FDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVK 456
Query: 214 NGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRL---------DEALELFERMPER--- 261
NG + A E++D M + + GYA R D+A L E M
Sbjct: 457 NGNLSMATEVYDEMLRKGIKP-----DGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHH 511
Query: 262 --DMPSWNTLVTGFIQNGDLNRA----EKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK 315
D+ +N + G + G+L +A K+F + +T+T ++ GY+++G + A
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 571
Query: 316 IFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
+++++ L P+ T+ ++ + L + Q + K + + +AL+
Sbjct: 572 LYDEMLRKR-LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGM 630
Query: 376 SKCGELHIARRIF----DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
K G + A R +EG+ + S+ +I+ +E + L+ +M + +
Sbjct: 631 CKAGNIDEAYRYLCKMEEEGIPPNK--YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEP 688
Query: 432 NDVTYVELL 440
+ T+ L
Sbjct: 689 DGYTHRALF 697
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/440 (23%), Positives = 216/440 (49%), Gaps = 39/440 (8%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
NT I L + +A L DRM + DL +G ++NG G A L + +
Sbjct: 190 NTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ 249
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
K V+ + +++G K +++A LF EM + +R +++++I G+
Sbjct: 250 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 309
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVD 209
A L M ER +V +++ +I A + G++ +A+ +++M +R + +++++++
Sbjct: 310 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 369
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDM-- 263
G ++ R+D+A+++F+ M + +VV++N +IKG+ K +R++E +E+F M +R +
Sbjct: 370 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 429
Query: 264 --PSWNTLVTGFIQNGDLNRAEKLFHEMPQ----KNVITWTAMMTGYVQHGLSEEALKIF 317
++N L+ G Q GD + A+++F EM N++T+ ++ G ++G E+A+ +F
Sbjct: 430 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 489
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
LQ ++P T+ ++ + +G + +S + + +I+ + +
Sbjct: 490 EYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 378 CGELHIARRIFDE----GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
G A +F E G L +N +I A G + + L +M+ GF A D
Sbjct: 549 KGSKEEADALFKEMKEDGTLPNSG--CYNTLIRARLRDGDREASAELIKEMRSCGF-AGD 605
Query: 434 VTYVELLTACSHAGLVEEGL 453
+ + L+T H G +++
Sbjct: 606 ASTIGLVTNMLHDGRLDKSF 625
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 196/435 (45%), Gaps = 65/435 (14%)
Query: 56 CQEGRIDDARKLFDRM----PERDLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDV 108
C RI +A L D+M + + + T+I+G + EA L D D+
Sbjct: 162 CHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDL 221
Query: 109 VTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLFRR 164
VT+ +VNG K + A L +M E V +NT+IDG + + AL+LF+
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 165 MPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGR 216
M + NVV+++++I L GR DA + M ER DV +++ ++D G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 217 VDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNT 268
+ +A +L+D M R++ V+++ +I G+ + RLDEA ++FE M + D+ ++NT
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
L+ GF + + ++F EM Q+ N +T+ ++ G Q G + A +IF ++ +D
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD- 460
Query: 325 ALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIA 384
+ PN T+ T+L L + + + + ++ + + Y
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY------------------ 502
Query: 385 RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACS 444
++N MI G ++ +LF + G + + V Y +++
Sbjct: 503 ---------------TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFC 547
Query: 445 HAGLVEEGLQYFDKL 459
G EE F ++
Sbjct: 548 RKGSKEEADALFKEM 562
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 188/379 (49%), Gaps = 27/379 (7%)
Query: 107 DVVTWTALVNGYVKLNQIEEA----ERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLF 162
++VT ++L+NGY +I EA +++F + N ++NT+I G + + +A+ L
Sbjct: 150 NIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 163 RRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAIN 214
RM + ++V++ ++ L + G + A N+M E V + T++DGL
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKY 269
Query: 215 GRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSW 266
+DDA LF M + NVV+++ +I R +A L M ER D+ ++
Sbjct: 270 KHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQA 322
+ L+ F++ G L AEKL+ EM ++++ +T+++++ G+ H +EA ++F + +
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
H P+ T+ T++ + EG ++ + +S+ +T + LI + G+
Sbjct: 390 KHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 383 IARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
+A+ IF E + +++++N ++ +G ++A+ +F +Q + TY ++
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 441 TACSHAGLVEEGLQYFDKL 459
AG VE+G F L
Sbjct: 509 EGMCKAGKVEDGWDLFCNL 527
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 175/408 (42%), Gaps = 47/408 (11%)
Query: 216 RVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMP----SWN 267
++DDA LF M P +++ ++ ++ AK + D + L E+M +P +++
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 268 TLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
L+ F + L A + +M + N++T ++++ GY EA+ + +++
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+PNT TF T++ +E + + Q ++N K G+ +
Sbjct: 181 -GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 384 ARRIF---DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
A + ++G L LI +N +I + + +A+NLF +M+ G + N VTY L+
Sbjct: 240 AFNLLNKMEQGKLEPGVLI-YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 441 TACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GV 497
+ + G + + +++ R I ++ L+D + G+L EA + + + +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 498 DLSLSVWGPLLAGCNVHGNADIGK-----LVAKKILKIEPENAGTYSLLSNMYASVGKWK 552
D S+ + L+ G +H D K +V+K + TY+ L + + +
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF----PDVVTYNTLIKGFCKYKRVE 413
Query: 553 EAANVRMKMKDKGLKKQPGCSWVEVGNTVQ-------VFVVGDKSHSQ 593
E V +M +GL VGNTV +F GD +Q
Sbjct: 414 EGMEVFREMSQRGL----------VGNTVTYNILIQGLFQAGDCDMAQ 451
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 201/406 (49%), Gaps = 29/406 (7%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFR 163
+ T+ ++ + +N+I+ A L +M + N + T+I ++ + +AL L
Sbjct: 217 LFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLE 276
Query: 164 RMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAING 215
M V ++N +I L + RI +A N+M R D ++ +++GL G
Sbjct: 277 EMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG 336
Query: 216 RVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER-----DMPSWNTLV 270
RVD A++LF R+P +V +N +I G+ + RLD+A + M D+ ++N+L+
Sbjct: 337 RVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLI 396
Query: 271 TGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
G+ + G + A ++ H+M K NV ++T ++ G+ + G +EA + N++ AD L
Sbjct: 397 YGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GL 455
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIA-- 384
KPNT F ++ A + E +I + + + + Y ++LI+ + E+ A
Sbjct: 456 KPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALW 515
Query: 385 --RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTA 442
R + EG++ + +++N +I A+ G KEA L N+M G +++TY L+
Sbjct: 516 LLRDMISEGVVA--NTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKG 573
Query: 443 CSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEA 488
AG V++ F+K+L++ + LC R+G ++EA
Sbjct: 574 LCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC-RSGMVEEA 618
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 223/492 (45%), Gaps = 43/492 (8%)
Query: 2 KKLPPLSFILMHAPKLKTHPTFIINGYPFLRTMSTSTSSLHSAMKDCNTSISRLCQEGRI 61
+K+PP F K I + LR M+ +S + T I L + R+
Sbjct: 211 RKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIY--QTLIHSLSKCNRV 268
Query: 62 DDARKLFDRM----PERDLHLWGTMINGYIMCGVIKEARKLFD-------GPDAMKDVVT 110
++A +L + M D + +I G I EA K+ + PD +T
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDD----IT 324
Query: 111 WTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMPER-- 168
+ L+NG K+ +++ A+ LFY +P+ + +NT+I G+ +G+ + A + M
Sbjct: 325 YGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYG 384
Query: 169 ---NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDAR 221
+V ++N++I + G + A + MR + +V S+T +VDG G++D+A
Sbjct: 385 IVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAY 444
Query: 222 ELFDRMPV----RNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGF 273
+ + M N V +N +I + K R+ EA+E+F MP + D+ ++N+L++G
Sbjct: 445 NVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGL 504
Query: 274 IQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPN 329
+ ++ A L +M + N +T+ ++ +++ G +EA K+ N++ +
Sbjct: 505 CEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE 564
Query: 330 TGTFVTVLGACSDLAG-LNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIF 388
+ G C AG +++ + + + + + S + LIN + G + A
Sbjct: 565 ITYNSLIKGLCR--AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQ 622
Query: 389 DEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHA 446
E +LR D++++N +I G ++ + +F K+Q G + VT+ L++
Sbjct: 623 KEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKG 682
Query: 447 GLVEEGLQYFDK 458
G V + D+
Sbjct: 683 GFVYDACLLLDE 694
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 100/502 (19%), Positives = 194/502 (38%), Gaps = 81/502 (16%)
Query: 107 DVVTWTALVNGYV-----------KLN---QIEEAERLFYEMPERNVRSWNTMIDGYARN 152
++ +WT NGY KL + + +RL +M + + ++ R+
Sbjct: 96 ELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRD 155
Query: 153 -------GQTEKALDLFRRM--PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK- 202
GQT + + R + E S+N +++ L + A F M R +
Sbjct: 156 YDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPP 215
Query: 203 ---SWTTMVDGLAINGRVDDARELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELF 255
++ ++ +D A L M V N V + +I +K R++EAL+L
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 256 ERM----PERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQH 307
E M D ++N ++ G + +N A K+ + M + IT+ +M G +
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 308 GLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYV 367
G + A +F ++ KP F T+ IH ++ ++ V
Sbjct: 336 GRVDAAKDLFYRIP-----KPEIVIFNTL---------------IHGFVTHGRLDDAKAV 375
Query: 368 VSALINMYSKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL 427
+S ++ Y G++ D+ ++N +I Y G A+ + + M+
Sbjct: 376 LSDMVTSY---------------GIVP--DVCTYNSLIYGYWKEGLVGLALEVLHDMRNK 418
Query: 428 GFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKE 487
G + N +Y L+ G ++E +++ + ++ + CL+ + R+ E
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD-GLKPNTVGFNCLISAFCKEHRIPE 477
Query: 488 AFNIIEGL---GVDLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKIEPENAGTYSLLSN 543
A I + G + + L++G C V L+ I + N TY+ L N
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 544 MYASVGKWKEAANVRMKMKDKG 565
+ G+ KEA + +M +G
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQG 559
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 12/249 (4%)
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
+ P TF V+ A + ++ + + ++K ++ + LI+ SKC ++ A
Sbjct: 213 IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 386 RIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
++ +E L D ++N +I EA + N+M GF +D+TY L+
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 444 SHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEA----FNIIEGLGVDL 499
G V+ F ++ K + + L+ GRL +A +++ G+
Sbjct: 333 CKIGRVDAAKDLFYRIPKPEIVI-----FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 500 SLSVWGPLLAGCNVHGNADIGKLVAKKIL-KIEPENAGTYSLLSNMYASVGKWKEAANVR 558
+ + L+ G G + V + K N +Y++L + + +GK EA NV
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 559 MKMKDKGLK 567
+M GLK
Sbjct: 448 NEMSADGLK 456
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 178/355 (50%), Gaps = 31/355 (8%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALDLFR 163
+VT+ +L+NG+ + +++ +A +F +M + NV +NT+IDG ++ Q + ALDL
Sbjct: 151 IVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLN 210
Query: 164 RMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAING 215
RM + +VV++N++I L GR DA + M +R DV ++ ++D G
Sbjct: 211 RMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Query: 216 RVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWN 267
RV +A E ++ M R ++V+++++I G RLDEA E+F M + D+ +++
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 330
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQ----KNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
L+ G+ ++ + KLF EM Q +N +T+T ++ GY + G A +IF ++
Sbjct: 331 ILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM-VF 389
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+ PN T+ +L D + + I + K + +I K GE+
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 384 ARRIF----DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
A I+ +GL+ D+ ++ M+ G +EA LF KM+E G N+
Sbjct: 450 AWDIYCSLNCQGLM--PDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNEC 502
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 159/312 (50%), Gaps = 32/312 (10%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDG--- 101
NT I LC+ ++D+A L +RM + D+ + ++I+G G +A ++
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEK 157
+ DV T+ AL++ VK ++ EAE + EM R ++ +++ +I G + ++
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDV----KSWTTMVD 209
A ++F M + +VV+++ +I + ++E F +M +R V ++T ++
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369
Query: 210 GLAINGRVDDARELFDRMPV----RNVVSWNVMIKGYAKNRRLDEALELFERMP----ER 261
G G+++ A E+F RM N++++NV++ G N ++++AL + M +
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI----TWTAMMTGYVQHGLSEEALKIF 317
D+ ++N ++ G + G++ A ++ + + ++ T+T MM G + GL EA +F
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489
Query: 318 NKLQADHALKPN 329
K++ D L PN
Sbjct: 490 RKMKEDGIL-PN 500
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 167/337 (49%), Gaps = 23/337 (6%)
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRM----PERNVVSWNTIIKALSECGRIEDAQWHF 193
N+ + N +++ + R Q AL +M E ++V++ +++ R+ DA + F
Sbjct: 115 NLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 194 NQM----RERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKN 245
+QM + +V + T++DGL + +VD+A +L +RM +VV++N +I G +
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 246 RRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITW 297
R +A + M +R D+ ++N L+ ++ G ++ AE+ + EM ++ +++T+
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 298 TAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLIS 357
+ ++ G + +EA ++F + + P+ T+ ++ + G ++ +S
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMS 353
Query: 358 KTAFQESTYVVSALINMYSKCGELHIARRIFDEGLL--RQRDLISWNGMIAAYAHHGYGK 415
+ +T + LI Y + G+L++A IF + ++I++N ++ +G +
Sbjct: 354 QRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIE 413
Query: 416 EAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEG 452
+A+ + MQ+ G A+ VTY ++ AG V +
Sbjct: 414 KALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADA 450
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 207/441 (46%), Gaps = 40/441 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDG--- 101
N+ ++ C RI +A L D+M E D + T+++G EA L +
Sbjct: 149 NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVV 208
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEK 157
D+VT+ A++NG K + + A L +M E +V +NT+IDG + +
Sbjct: 209 KGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDD 268
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKS----WTTMVD 209
A DLF +M + +V ++N +I L GR DA + M E+++ + ++D
Sbjct: 269 AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALID 328
Query: 210 GLAINGRVDDARELFDRM-----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM- 263
G++ +A +L+D M +VV++N +IKG+ K +R++E +E+F M +R +
Sbjct: 329 AFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 388
Query: 264 ---PSWNTLVTGFIQNGDLNRAEKLFHEM----PQKNVITWTAMMTGYVQHGLSEEALKI 316
++ TL+ GF Q D + A+ +F +M +++T+ ++ G +G E AL +
Sbjct: 389 GNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVV 448
Query: 317 FNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
F +Q +K + T+ T++ A + +G + +S + + + +++ +
Sbjct: 449 FEYMQK-RDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFC 507
Query: 377 KCGELHIARRIF----DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
+ G A +F ++G L ++N +I A G + L +M+ GF A
Sbjct: 508 RKGLKEEADALFVEMKEDGPLPNSG--TYNTLIRARLRDGDEAASAELIKEMRSCGF-AG 564
Query: 433 DVTYVELLTACSHAGLVEEGL 453
D + L+T H G +++
Sbjct: 565 DASTFGLVTNMLHDGRLDKSF 585
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/475 (20%), Positives = 227/475 (47%), Gaps = 41/475 (8%)
Query: 22 TFIINGYPFLRTMSTSTSSLHSAMKDCNTSISR-LCQEGRIDDARKLFDRMPERDLHLWG 80
T ++ G P T+ S ++ DC ++SR + Q+ ++DDA LF M + +
Sbjct: 17 TVLLKGNP-RTTLCWERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKS--RPFP 73
Query: 81 TMINGYIMCGVIKEARKLFDGPDAM----------KDVVTWTALVNGYVKLNQIEEAERL 130
+++ + I + K FD ++ ++ T++ +N + + +Q+ A +
Sbjct: 74 SIVEFSKLLSAIAKMNK-FDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 131 FYEMPE----RNVRSWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSE 182
+M + ++ + N++++G+ + +A+ L +M E + V++ T++ L +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 183 CGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPV----RNVVS 234
+ +A +M + D+ ++ +++GL G D A L ++M +VV
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 235 WNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMP 290
+N +I G K + +D+A +LF +M + D+ ++N L++ G + A +L +M
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 291 QKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGL 346
+KN+ + + A++ +V+ G EA K+++++ P+ + T++ +
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 347 NEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLISWNGM 404
EG ++ + +S+ +T + LI+ + + + A+ +F + + D++++N +
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 405 IAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL 459
+ ++G + A+ +F MQ+ + + VTY ++ A AG VE+G F L
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSL 487
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 131/287 (45%), Gaps = 16/287 (5%)
Query: 216 RVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWN 267
++DDA LF M P ++V ++ ++ AK + D + L E+M ++ +++
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQ----KNVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
+ F + L+ A + +M + +++T +++ G+ EA+ + +++ +
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM-VE 173
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+P+T TF T++ +E + + + Q A+IN K GE +
Sbjct: 174 MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDL 233
Query: 384 ARRIFD--EGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
A + + E + D++ +N +I + + +A +LFNKM+ G + + TY L++
Sbjct: 234 ALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLIS 293
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEA 488
+ G + + +L+ ++I + L+D + G+L EA
Sbjct: 294 CLCNYGRWSDASRLLSDMLE-KNINPDLVFFNALIDAFVKEGKLVEA 339
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 134/601 (22%), Positives = 273/601 (45%), Gaps = 69/601 (11%)
Query: 24 IINGYPF----------LRTMSTSTSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPE 73
+INGY LR MS S + + I C++G +++A +F+ + E
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTY--TSLIKGYCKKGLMEEAEHVFELLKE 324
Query: 74 R----DLHLWGTMINGYIMCGVIKEARKLFDGPDAM---KDVVTWTALVNGYVKLNQIEE 126
+ D H++G +++GY G I++A ++ D + + +L+NGY K Q+ E
Sbjct: 325 KKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVE 384
Query: 127 AERLFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFRRMPERNVV----SWNTIIK 178
AE++F M + +++ ++NT++DGY R G ++AL L +M ++ VV ++N ++K
Sbjct: 385 AEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 179 ALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVR---- 230
S G D + M +R V S +T+++ L G ++A +L++ + R
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLT 504
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERM----PERDMPSWNTLVTGFIQNGDLNRAEKLF 286
+ ++ NVMI G K +++EA E+ + + + + ++ L G+ + G+L A +
Sbjct: 505 DTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVK 564
Query: 287 HEMPQKNVI----TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
M +K + + +++G ++ + + +L+A L P T+ ++ +
Sbjct: 565 EYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRA-RGLTPTVATYGALITGWCN 623
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWN 402
+ +++ T F+ ++ +N+ SK DE L + ++ ++
Sbjct: 624 IGMIDKAYA-------TCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFD 676
Query: 403 GMIAAY-AHHGYGKEAINLFNKMQELG-----------FQANDVTYVELLTACSHAGLVE 450
++ Y + + + + K Q++ N++ Y + AG +E
Sbjct: 677 LLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLE 736
Query: 451 EGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSLSVWGPL 507
+ + F LL + E Y L+ C AG + +AF + + + G+ ++ + L
Sbjct: 737 DARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNAL 796
Query: 508 LAGCNVHGNADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKG 565
+ G GN D + + K+ + I P NA TY+ L + G EA ++ KM +KG
Sbjct: 797 IKGLCKLGNVDRAQRLLHKLPQKGITP-NAITYNTLIDGLVKSGNVAEAMRLKEKMIEKG 855
Query: 566 L 566
L
Sbjct: 856 L 856
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 192/448 (42%), Gaps = 48/448 (10%)
Query: 138 NVRSWNTMIDGYARNGQTEKALDLFRRMP-----ERNVVSWNTIIKALSECGRIEDAQWH 192
+V + + +++ Y R+G +KA+ + E NVV++N++I + G +E
Sbjct: 224 DVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRV 283
Query: 193 FNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEAL 252
M ER V RNVV++ +IKGY K ++EA
Sbjct: 284 LRLMSERGVS---------------------------RNVVTYTSLIKGYCKKGLMEEAE 316
Query: 253 ELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWT----AMMTGY 304
+FE + E+ D + L+ G+ + G + A ++ M + V T T +++ GY
Sbjct: 317 HVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGY 376
Query: 305 VQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQES 364
+ G EA +IF+++ D +LKP+ T+ T++ ++E ++ + + +
Sbjct: 377 CKSGQLVEAEQIFSRMN-DWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPT 435
Query: 365 TYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFN 422
+ L+ YS+ G H ++ L R D IS + ++ A G EA+ L+
Sbjct: 436 VMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWE 495
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRA 482
+ G + +T +++ V E + D + R + Y L +
Sbjct: 496 NVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQT-YQALSHGYYKV 554
Query: 483 GRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVHGNAD-IGKLVAKKILKIEPENAGTY 538
G LKEAF + E + G+ ++ ++ L++G + + + + LV + + TY
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 539 SLLSNMYASVGKWKEAANVRMKMKDKGL 566
L + ++G +A +M +KG+
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGI 642
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 78/135 (57%), Gaps = 12/135 (8%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHL-----WGTMINGYIMCGVIKEARKLFDG-- 101
N +I+ LC+ G+++DARKLF + D + + +I+G + G I +A L D
Sbjct: 723 NVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMA 782
Query: 102 -PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTE 156
+ ++VT+ AL+ G KL ++ A+RL +++P++ N ++NT+IDG ++G
Sbjct: 783 LKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVA 842
Query: 157 KALDLFRRMPERNVV 171
+A+ L +M E+ +V
Sbjct: 843 EAMRLKEKMIEKGLV 857
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 153/342 (44%), Gaps = 48/342 (14%)
Query: 271 TGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNT 330
+GF+ G+L R K F P + ++ Y + GL + AL +F+ + ++ P+
Sbjct: 136 SGFVVWGELVRVFKEFSFSPT----VFDMILKVYAEKGLVKNALHVFDNM-GNYGRIPSL 190
Query: 331 GTFVTVLGACSDLAGLNEGQQ---IHQLISKTAFQES--TYVVSALINMYSKCGELHIAR 385
+ + + +G+ +H +F+ S + S ++N Y + G + A
Sbjct: 191 LSCNS-----LLSNLVRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAM 245
Query: 386 RIFDE---GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTA 442
E L + +++++N +I YA G + + M E G N VTY L+
Sbjct: 246 VFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKG 305
Query: 443 CSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAF----NIIEGLGVD 498
GL+EE F+ LLK + + + Y L+D R G++++A N+IE +GV
Sbjct: 306 YCKKGLMEEAEHVFE-LLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIE-IGVR 363
Query: 499 LSLSVWGPLLAGCNVHGNADIGKLV-AKKIL------KIEPENAGTYSLLSNMYASVGKW 551
+ ++ L ++G G+LV A++I ++P++ TY+ L + Y G
Sbjct: 364 TNTTICNSL-----INGYCKSGQLVEAEQIFSRMNDWSLKPDHH-TYNTLVDGYCRAGYV 417
Query: 552 KEAANVRMKMKDKGLKKQPGCSWVEVGNTVQVFVVGDKSHSQ 593
EA +K+ D+ +K EV TV + + K +S+
Sbjct: 418 DEA----LKLCDQMCQK-------EVVPTVMTYNILLKGYSR 448
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 133/570 (23%), Positives = 250/570 (43%), Gaps = 71/570 (12%)
Query: 38 TSSLHSAMKDCN---------TSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMIN 84
S L S + DC T I+ C+ G +D A LF M +R DL + T+I+
Sbjct: 270 ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 85 GYIMCGVIKEARKLFDGP---DAMKDVVTWTALVNGYVKLNQIEEA----ERLFYEMPER 137
GY G++ KLF DVV +++ ++ YVK + A +R+ +
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 138 NVRSWNTMIDGYARNGQTEKALDLF----RRMPERNVVSWNTIIKALSECGRIEDAQWHF 193
NV ++ +I G ++G+ +A ++ +R E ++V+++++I +CG + +
Sbjct: 390 NVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALY 449
Query: 194 NQMRER----DVKSWTTMVDGLAINGRVDDARELFDRM---PVR-NVVSWNVMIKGYAKN 245
M + DV + +VDGL+ G + A +M +R NVV +N +I G+ +
Sbjct: 450 EDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRL 509
Query: 246 RRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYV 305
R DEAL++F M + G + +V T+T +M +
Sbjct: 510 NRFDEALKVFRLMG----------IYGI-----------------KPDVATFTTVMRVSI 542
Query: 306 QHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQEST 365
G EEAL +F ++ L+P+ + T++ A G Q+ L+ +
Sbjct: 543 MEGRLEEALFLFFRM-FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADI 601
Query: 366 YVVSALINMYSKCGELHIARRIFD---EGLLRQRDLISWNGMIAAYAHHGYGKEAINLFN 422
V + +I++ KC + A + F+ EG + + D++++N MI Y EA +F
Sbjct: 602 AVCNVVIHLLFKCHRIEDASKFFNNLIEGKM-EPDIVTYNTMICGYCSLRRLDEAERIFE 660
Query: 423 KMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRA 482
++ F N VT L+ ++ ++ F ++ + + Y CL+D ++
Sbjct: 661 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-SIMAEKGSKPNAVTYGCLMDWFSKS 719
Query: 483 GRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKIL--KIEPENAGT 537
++ +F + E + G+ S+ + ++ G G D + + + K+ P+
Sbjct: 720 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVA- 778
Query: 538 YSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
Y++L Y VG+ EAA + M G+K
Sbjct: 779 YAILIRGYCKVGRLVEAALLYEHMLRNGVK 808
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 122/449 (27%), Positives = 206/449 (45%), Gaps = 80/449 (17%)
Query: 47 DCNTSISRLCQEGRIDDARKLFDRMPERDLH------LWGTMINGYIMCGVIKEARKLFD 100
DC I L D A ++ +R+ L MI+ G + A+++F+
Sbjct: 198 DCTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFE 257
Query: 101 GPDAM---KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNG 153
A V ++AL++ Y + EEA +F M E +R ++N +ID + G
Sbjct: 258 TAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGG 317
Query: 154 ----QTEKALDLFRR---MPERNVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVK 202
Q K D +R P+R +++N+++ S G E A+ F++M E+DV
Sbjct: 318 MEFKQVAKFFDEMQRNGVQPDR--ITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF 375
Query: 203 SWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERM 258
S+ T++D + G++D A E+ +MPV+ NVVS++ +I G+AK R DEAL LF M
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 259 P----ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHGLS 310
D S+NTL++ + + G A + EM +K+V+T+ A++ GY + G
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 311 EEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSA 370
+E K+F +++ +H L PN T+ S
Sbjct: 496 DEVKKVFTEMKREHVL-PNLLTY-----------------------------------ST 519
Query: 371 LINMYSKCGELHIARRIFDE----GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE 426
LI+ YSK G A IF E GL + D++ ++ +I A +G A++L ++M +
Sbjct: 520 LIDGYSKGGLYKEAMEIFREFKSAGL--RADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577
Query: 427 LGFQANDVTYVELLTACSHAGLVEEGLQY 455
G N VTY ++ A + ++ Y
Sbjct: 578 EGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 202/451 (44%), Gaps = 73/451 (16%)
Query: 85 GYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPE----RNVR 140
G+ V +E RK G A +A+++ + ++ A+R+F V
Sbjct: 217 GFYEFAVKRERRKNEQGKLA-------SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVY 269
Query: 141 SWNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECG-RIEDAQWHFNQ 195
+++ +I Y R+G E+A+ +F M E N+V++N +I A + G + F++
Sbjct: 270 AFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDE 329
Query: 196 MRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRR 247
M+ V+ ++ +++ + G + AR LFD M R +V S+N ++ K +
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 248 LDEALELFERMP-ERDMP---SWNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTA 299
+D A E+ +MP +R MP S++T++ GF + G + A LF EM + +++
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 300 MMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKT 359
+++ Y + G SEEAL I ++ A +K + T+ +LG
Sbjct: 450 LLSIYTKVGRSEEALDILREM-ASVGIKKDVVTYNALLGG-------------------- 488
Query: 360 AFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR---DLISWNGMIAAYAHHGYGKE 416
Y K G+ +++F E + R+ +L++++ +I Y+ G KE
Sbjct: 489 ---------------YGKQGKYDEVKKVFTE-MKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
A+ +F + + G +A+ V Y L+ A GLV + D++ K I Y ++
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK-EGISPNVVTYNSII 591
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPL 507
D GR+ + + + G + S S L
Sbjct: 592 DAFGRSATMDRSADYSNGGSLPFSSSALSAL 622
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 156/318 (49%), Gaps = 34/318 (10%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
NT + +C+ G++D A ++ +MP + ++ + T+I+G+ G EA LF
Sbjct: 378 NTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY 437
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEK 157
+ D V++ L++ Y K+ + EEA + EM +++V ++N ++ GY + G+ ++
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
+F M N+++++T+I S+ G ++A F + + DV ++ ++D
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPS 265
L NG V A L D M NVV++N +I + ++ +D + + +P
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN---GGSLPF 614
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEA--LKIFNKLQAD 323
++ ++ + + NR +LF ++ ++ T + G+ E + L++F K+
Sbjct: 615 SSSALSALTET-EGNRVIQLFGQLTTES----NNRTTKDCEEGMQELSCILEVFRKMH-Q 668
Query: 324 HALKPNTGTFVTVLGACS 341
+KPN TF +L ACS
Sbjct: 669 LEIKPNVVTFSAILNACS 686
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 138/284 (48%), Gaps = 15/284 (5%)
Query: 294 VITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIH 353
V ++A+++ Y + GL EEA+ +FN ++ ++ L+PN T+ V+ AC G E +Q+
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMK-EYGLRPNLVTYNAVIDACGK--GGMEFKQVA 324
Query: 354 QL---ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAY 408
+ + + Q ++L+ + S+ G AR +FDE R ++D+ S+N ++ A
Sbjct: 325 KFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI 384
Query: 409 AHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVR 468
G A + +M N V+Y ++ + AG +E L F ++ + I +
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM-RYLGIALD 443
Query: 469 EDHYACLVDLCGRAGRLKEAFNIIE---GLGVDLSLSVWGPLLAGCNVHGNADIGKLVAK 525
Y L+ + + GR +EA +I+ +G+ + + LL G G D K V
Sbjct: 444 RVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFT 503
Query: 526 KILK--IEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
++ + + P N TYS L + Y+ G +KEA + + K GL+
Sbjct: 504 EMKREHVLP-NLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLR 546
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 112/211 (53%), Gaps = 8/211 (3%)
Query: 363 ESTYVVSALINMYSKCGELHIARRIFDEGLL--RQRDLISWNGMIAAYAHHGYGKEAINL 420
E + SA+I+ + G++ IA+RIF+ + +++ +I+AY G +EAI++
Sbjct: 231 EQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISV 290
Query: 421 FNKMQELGFQANDVTYVELLTACSHAGL-VEEGLQYFDKLLKNRSIQVREDHYACLVDLC 479
FN M+E G + N VTY ++ AC G+ ++ ++FD++ +N +Q + L+ +C
Sbjct: 291 FNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVC 349
Query: 480 GRAGRLKEAFNIIEGLG---VDLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKIEPENA 535
R G + A N+ + + ++ + + LL G D+ +++A+ +K N
Sbjct: 350 SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 536 GTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
+YS + + +A G++ EA N+ +M+ G+
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 194/378 (51%), Gaps = 34/378 (8%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPE-----RNVRSWNTMIDGYARNGQTEKALDL 161
D++ T L+ G+ +L + +A ++ E+ E +V ++N MI GY + G+ AL +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKIL-EILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 162 FRRMP-ERNVVSWNTIIKALSECGRIEDAQWHFNQMRERD----VKSWTTMVDGLAINGR 216
RM +VV++NTI+++L + G+++ A ++M +RD V ++T +++ +
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 217 VDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNT 268
V A +L D M R +VV++NV++ G K RLDEA++ MP + ++ + N
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 269 LVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADH 324
++ G AEKL +M +K +V+T+ ++ + GL A+ I K+ H
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM-PQH 373
Query: 325 ALKPNTGTFVTVL-GACSDLAGLNEGQQIHQLISKTAFQE-STYVVSALINMYSKCGELH 382
+PN+ ++ +L G C + + + +++S+ + + TY + ++ K G++
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY--NTMLTALCKDGKVE 431
Query: 383 IARRIFDEGLLRQRD----LISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVE 438
A I ++ L + LI++N +I A G +AI L ++M+ + + +TY
Sbjct: 432 DAVEILNQ--LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 439 LLTACSHAGLVEEGLQYF 456
L+ S G V+E +++F
Sbjct: 490 LVGGLSREGKVDEAIKFF 507
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/473 (22%), Positives = 211/473 (44%), Gaps = 78/473 (16%)
Query: 27 GYPFLRTMSTSTSSLHSAMKD---CNTSISRLCQEGRIDDARKLFDRMPER----DLHLW 79
G+ FL M H + D C T I C+ G+ A K+ + + D+ +
Sbjct: 121 GFKFLENMV-----YHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITY 175
Query: 80 GTMINGYIMCGVIKEARKLFD----GPDAMK----------------------------- 106
MI+GY G I A + D PD +
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDC 235
Query: 107 --DVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALD 160
DV+T+T L+ + + + A +L EM +R +V ++N +++G + G+ ++A+
Sbjct: 236 YPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIK 295
Query: 161 LFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLA 212
MP + NV++ N I++++ GR DA+ M + V ++ +++ L
Sbjct: 296 FLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 355
Query: 213 INGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMP 264
G + A ++ ++MP N +S+N ++ G+ K +++D A+E ERM R D+
Sbjct: 356 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 415
Query: 265 SWNTLVTGFIQNGDLNRAEKLFHEMPQKN----VITWTAMMTGYVQHGLSEEALKIFNKL 320
++NT++T ++G + A ++ +++ K +IT+ ++ G + G + +A+K+ +++
Sbjct: 416 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 475
Query: 321 QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
+A LKP+T T+ +++G S ++E + + + + +++ M C
Sbjct: 476 RAKD-LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI--MLGLCKS 532
Query: 381 LHIARRIFDEGLLRQRDL----ISWNGMIAAYAHHGYGKEAINLFNKMQELGF 429
R I + R S+ +I A+ G KEA+ L N++ G
Sbjct: 533 RQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 177/390 (45%), Gaps = 32/390 (8%)
Query: 186 IEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRM----PVRNVVSWNVMIKG 241
+E+ +H N D+ TT++ G G+ A ++ + + V +V+++NVMI G
Sbjct: 125 LENMVYHGNV---PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISG 181
Query: 242 YAKNRRLDEALELFERMP-ERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKN----VIT 296
Y K ++ AL + +RM D+ ++NT++ +G L +A ++ M Q++ VIT
Sbjct: 182 YCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVIT 241
Query: 297 WTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF-VTVLGACSDLAGLNEGQQIHQL 355
+T ++ + A+K+ ++++ D P+ T+ V V G C + L+E +
Sbjct: 242 YTILIEATCRDSGVGHAMKLLDEMR-DRGCTPDVVTYNVLVNGICKE-GRLDEAIKFLND 299
Query: 356 ISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGY 413
+ + Q + + ++ G A ++ + L + ++++N +I G
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 414 GKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA 473
AI++ KM + G Q N ++Y LL ++ ++Y ++++ +
Sbjct: 360 LGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 474 CLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCN--VHGNADIGKL-VAKKIL-- 528
L LC + G++++A I+ LS P+L N + G A GK A K+L
Sbjct: 420 MLTALC-KDGKVEDAVEILN----QLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 529 ----KIEPENAGTYSLLSNMYASVGKWKEA 554
++P+ TYS L + GK EA
Sbjct: 475 MRAKDLKPDTI-TYSSLVGGLSREGKVDEA 503
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 154/298 (51%), Gaps = 47/298 (15%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLF---DG 101
N I +EG+ DA +L++ M ++ + ++ING+ M G + EAR++F +
Sbjct: 251 NALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMET 310
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEK 157
DVV +T+L+NG+ K ++++A ++FYEM ++ N ++ T+I G+ + G+
Sbjct: 311 KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNV 370
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAI 213
A ++F M R N+ ++N ++ L G+++ A F M++R+ +DG+A
Sbjct: 371 AQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE-------MDGVA- 422
Query: 214 NGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVT-- 271
N+ ++NV++ G N +L++AL +FE M +R+M T
Sbjct: 423 ----------------PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 272 --GFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
G + G + A LF +P K NV+T+T M++G + GL EA +F K++ D
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 186/388 (47%), Gaps = 42/388 (10%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS----WNTMIDGYARNGQTEKALDLF 162
D+VT+T+L+NG+ N++EEA + +M E ++ + T+ID +NG AL LF
Sbjct: 141 DIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLF 200
Query: 163 RRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAIN 214
+M +VV + +++ L GR DA M +R DV ++ ++D
Sbjct: 201 DQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKE 260
Query: 215 GRVDDARELFD---RMPVR-NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSW 266
G+ DA EL++ RM + N+ ++ +I G+ +DEA ++F M + D+ ++
Sbjct: 261 GKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
+L+ GF + ++ A K+F+EM QK N IT+T ++ G+ Q G A ++F+ +
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM-V 379
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK---TAFQESTYVVSALINMYSKCG 379
+ PN T+ +L + + I + + K + + + L++ G
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 380 ELHIARRIFDEGLLRQRDL--------ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQA 431
+L A +F++ +R+R++ I GM A G K A+NLF + G +
Sbjct: 440 KLEKALMVFED--MRKREMDIGIITYTIIIQGMCKA----GKVKNAVNLFCSLPSKGVKP 493
Query: 432 NDVTYVELLTACSHAGLVEEGLQYFDKL 459
N VTY +++ GL E F K+
Sbjct: 494 NVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 205/419 (48%), Gaps = 41/419 (9%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEARKLFDGPD 103
CN ++ CQ + A +M E D+ + ++ING+ + ++EA + +
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 104 AM---KDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRS----WNTMIDGYARNGQTE 156
M DVV +T +++ K + A LF +M +R + ++++G +G+
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 157 KALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMV 208
A L R M +R +V+++N +I A + G+ DA+ +N+M + ++T+++
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 209 DGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMP 264
+G + G VD+AR++F M + +VV++ +I G+ K +++D+A+++F M ++ +
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 265 ----SWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKI 316
++ TL+ GF Q G N A+++F M + N+ T+ ++ +G ++AL I
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMI 409
Query: 317 FNKLQADH--ALKPNTGTFVTVL-GACSDLAGLNEGQQIHQLISKTAFQESTYVVSALIN 373
F +Q + PN T+ +L G C + L + + + + K + +I
Sbjct: 410 FEDMQKREMDGVAPNIWTYNVLLHGLCYN-GKLEKALMVFEDMRKREMDIGIITYTIIIQ 468
Query: 374 MYSKCGELHIARRIF----DEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELG 428
K G++ A +F +G+ + +++++ MI+ G EA LF KM+E G
Sbjct: 469 GMCKAGKVKNAVNLFCSLPSKGV--KPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 210/438 (47%), Gaps = 34/438 (7%)
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKALD 160
+ ++ +T L+N K+ + + L + ++ + N +++ + ++ Q A
Sbjct: 69 LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 161 LFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLA 212
+M E ++V++ ++I R+E+A NQM E DV +TT++D L
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 213 INGRVDDARELFDRMP---VR-NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMP 264
NG V+ A LFD+M +R +VV + ++ G + R +A L M +R D+
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 265 SWNTLVTGFIQNGDLNRAEKLFHEMPQ----KNVITWTAMMTGYVQHGLSEEALKIFNKL 320
++N L+ F++ G AE+L++EM + N+ T+T+++ G+ G +EA ++F +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 321 QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
+ P+ + +++ +++ +I +S+ +T + LI + + G+
Sbjct: 309 ETKGCF-PDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 381 LHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQEL---GFQANDVT 435
++A+ +F + R ++ ++N ++ ++G K+A+ +F MQ+ G N T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 436 YVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
Y LL + G +E+ L F+ + K + + +C +AG++K A N+ L
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC-KAGKVKNAVNLFCSL 486
Query: 496 ---GVDLSLSVWGPLLAG 510
GV ++ + +++G
Sbjct: 487 PSKGVKPNVVTYTTMISG 504
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/474 (20%), Positives = 200/474 (42%), Gaps = 62/474 (13%)
Query: 123 QIEEAERLFYEM----PERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWN 174
Q EA LF M P ++ + +++ A+ + + ++L + ++ + N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 175 TIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR 230
++ + + A +M E D+ ++T++++G + R+++A + ++M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 231 ----NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRA 282
+VV + +I KN ++ AL LF++M D+ + +LV G +G A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 283 EKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
+ L M ++ +VIT+ A++ +V+ G +A +++N++ ++ PN T+ +++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM-IRMSIAPNIFTYTSLIN 290
Query: 339 ACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDL 398
++E +Q+ L+ ++LIN + KC ++ A +IF E + Q+ L
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE--MSQKGL 348
Query: 399 ----ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQ 454
I++ +I + G A +F+ M G N TY LL + G V++ L
Sbjct: 349 TGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALM 408
Query: 455 YFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVH 514
F+ + K E GV ++ + LL G +
Sbjct: 409 IFEDMQKR------------------------------EMDGVAPNIWTYNVLLHGLCYN 438
Query: 515 GNADIGKLVAKKILKIEPENAGTYSLLSNM-YASVGKWKEAANVRMKMKDKGLK 567
G + +V + + K E + + GK K A N+ + KG+K
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVK 492
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 202/427 (47%), Gaps = 69/427 (16%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
T I L + +A L DRM +R +L +G ++NG G I A L + +A
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 105 MK---DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
K DVV + +++ K +++A LF EM + +R +++++I G+
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 158 ALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
A L M E+ N+V++N +I A + G+ +A+ + M +R D+ ++ ++++
Sbjct: 239 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN 298
Query: 210 GLAINGRVDDARELFDRMPVRNVV----SWNVMIKGYAKNRRLDEALELFERMPER---- 261
G ++ R+D A+++F+ M ++ ++N +IKG+ K++R+++ ELF M R
Sbjct: 299 GFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 358
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIF 317
D ++ TL+ G +GD + A+K+F +M +++T++ ++ G +G E+AL++F
Sbjct: 359 DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVF 418
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
+ +Q K+ + Y+ + +I K
Sbjct: 419 DYMQ------------------------------------KSEIKLDIYIYTTMIEGMCK 442
Query: 378 CGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVT 435
G++ +F L+ + +++++N MI+ +EA L KM+E G + T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 436 YVELLTA 442
Y L+ A
Sbjct: 503 YNTLIRA 509
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/483 (22%), Positives = 220/483 (45%), Gaps = 63/483 (13%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFR 163
+VT ++L+NGY +I +A L +M E R ++ T+I G + + +A+ L
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 139
Query: 164 RMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAING 215
RM +R N+V++ ++ L + G I+ A N+M E DV + T++D L
Sbjct: 140 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 199
Query: 216 RVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWN 267
VDDA LF M + NVV+++ +I R +A +L M E+ ++ ++N
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
L+ F++ G AEKL +M ++ ++ T+ +++ G+ H ++A ++F + +
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
P+ T+ T++ + +G ++ F+E ++
Sbjct: 320 DCF-PDLDTYNTLIKGFCKSKRVEDGTEL--------FREMSH----------------- 353
Query: 384 ARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTAC 443
GL+ D +++ +I H G A +F +M G + +TY LL
Sbjct: 354 ------RGLVG--DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 444 SHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLS 500
+ G +E+ L+ FD + K+ I++ Y +++ +AG++ + +++ L GV +
Sbjct: 406 CNNGKLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 464
Query: 501 LSVWGPLLAGCNVHGNADIGKLVAKKILKIEP-ENAGTYSLLSNMYASVGKWKEAANVRM 559
+ + +++G + KK+ + P ++GTY+ L + G +A +
Sbjct: 465 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIR 524
Query: 560 KMK 562
+M+
Sbjct: 525 EMR 527
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 110/263 (41%), Gaps = 74/263 (28%)
Query: 46 KDC-------NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKL 98
KDC NT I C+ R++D +LF M R L
Sbjct: 319 KDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL---------------------- 356
Query: 99 FDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQ 154
+ D VT+T L+ G + A+++F +M ++ +++ ++DG NG+
Sbjct: 357 ------VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGK 410
Query: 155 TEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDG 210
EKAL++F M + ++ + T+I+ + + G+++D F + + VK
Sbjct: 411 LEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKP------- 463
Query: 211 LAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM----PERDMPSW 266
NVV++N MI G R L EA L ++M P D ++
Sbjct: 464 --------------------NVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Query: 267 NTLVTGFIQNGDLNRAEKLFHEM 289
NTL+ +++GD + +L EM
Sbjct: 504 NTLIRAHLRDGDKAASAELIREM 526
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/357 (18%), Positives = 159/357 (44%), Gaps = 24/357 (6%)
Query: 228 PVRNVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAE 283
P+ ++ +N ++ AK ++ D + L E+M ++ ++N L+ F + ++ A
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 284 KLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGA 339
L +M + +++T ++++ GY +A+ + +++ + +P+T TF T++
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLIHG 124
Query: 340 CSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFD--EGLLRQRD 397
+E + + + Q + ++N K G++ +A + + E + D
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 398 LISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFD 457
++ +N +I + + + +A+NLF +M+ G + N VTY L++ G + Q
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 458 KLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVH 514
+++ + I + L+D + G+ EA + + + +D + + L+ G +H
Sbjct: 245 DMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH 303
Query: 515 GNADIGK-----LVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
D K +V+K + TY+ L + + ++ + +M +GL
Sbjct: 304 DRLDKAKQMFEFMVSKDCF----PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 162/304 (53%), Gaps = 31/304 (10%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFD---G 101
T I C GR DD KL M +R D+ + +I+ ++ G ++EA +L
Sbjct: 286 TTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ 345
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEK 157
D VT+T+L++G+ K NQ+++A + M + N+R++N +I+GY + +
Sbjct: 346 RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDD 405
Query: 158 ALDLFRRMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
L+LFR+M R V V++NT+I+ E G++E A+ F +M R D+ S+ ++D
Sbjct: 406 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLD 465
Query: 210 GLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER---- 261
GL NG + A E+F+++ ++ +N++I G ++D+A +LF +P +
Sbjct: 466 GLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 525
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIF 317
D+ ++N ++ G + G L+ A+ LF +M + N T+ ++ ++ G + ++ K+
Sbjct: 526 DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLI 585
Query: 318 NKLQ 321
+++
Sbjct: 586 EEIK 589
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/514 (24%), Positives = 224/514 (43%), Gaps = 116/514 (22%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFD---- 100
+T I+ LC EGR+ +A +L DRM E L ++NG + G + +A L D
Sbjct: 146 STLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVE 205
Query: 101 ----------GPD------------AMK------------DVVTWTALVNGYVKLNQIEE 126
GP AM+ D V ++ +++G K ++
Sbjct: 206 TGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265
Query: 127 AERLFYEMPERNVRS----WNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIK 178
A LF EM + ++ + T+I G+ G+ + L R M +R +VV+++ +I
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALID 325
Query: 179 ALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVR---- 230
+ G++ +A+ +M +R D ++T+++DG ++D A + D M +
Sbjct: 326 CFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLF 286
N+ ++N++I GY K +D+ LELF +M R D ++NTL+ GF + G L A++LF
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 287 HEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
EM + +++++ ++ G +G E+AL+IF K++ ++ + G + +
Sbjct: 446 QEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK-MELDIGIYNII------ 498
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLISWN 402
IH + + + ++ + +L K D+ ++N
Sbjct: 499 ---------IHGMCNASKVDDAWDLFCSLPLKGVK------------------PDVKTYN 531
Query: 403 GMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL-------TACSHAGLVEEGLQY 455
MI G EA LF KM+E G N TY L+ A A L+EE
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE---- 587
Query: 456 FDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAF 489
+K V +VD+ GRLK++F
Sbjct: 588 ----IKRCGFSVDASTVKMVVDMLS-DGRLKKSF 616
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 226/532 (42%), Gaps = 81/532 (15%)
Query: 114 LVNGYVKLNQIEEAERLFYEM----PERNVRSWNTMIDGYARNGQTEKALDLFRRMPERN 169
L +G V + + ++A LF EM P + ++ + AR Q + LDL ++M +
Sbjct: 44 LRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKG 102
Query: 170 VV-SWNTIIKALSECGRIEDAQWHFNQM-------RERDVKSWTTMVDGLAINGRVDDAR 221
+ + T+ ++ C R F+ M E D +++T+++GL + GRV +A
Sbjct: 103 IAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEAL 162
Query: 222 ELFDRM------PVRNVVSWNVMIKGYAKNRRLDE------------------------- 250
EL DRM P +++ N ++ G N ++ +
Sbjct: 163 ELVDRMVEMGHKP--TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLK 220
Query: 251 ----------ALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK---- 292
A+EL +M ER D ++ ++ G ++G L+ A LF+EM K
Sbjct: 221 VMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKA 280
Query: 293 NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQI 352
++I +T ++ G+ G ++ K+ + + P+ F ++ L E +++
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDM-IKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 353 HQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQR----DLISWNGMIAAY 408
H+ + + T ++LI+ + K +L A + D L+ + ++ ++N +I Y
Sbjct: 340 HKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD--LMVSKGCGPNIRTFNILINGY 397
Query: 409 AHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVR 468
+ + LF KM G A+ VTY L+ G +E + F +++ R VR
Sbjct: 398 CKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR---VR 454
Query: 469 ED--HYACLVD-LC--GRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG-CNVHGNADIGKL 522
D Y L+D LC G + E F IE ++L + ++ ++ G CN D L
Sbjct: 455 PDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDL 514
Query: 523 VAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGCSW 574
LK + TY+++ G EA + KM++ G GC++
Sbjct: 515 FCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDG-HSPNGCTY 565
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/490 (24%), Positives = 232/490 (47%), Gaps = 41/490 (8%)
Query: 110 TWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEKA---LDLF 162
++ ++V+ KL Q++ AE + + MP E +V S+N++IDG+ RNG A L+
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
Query: 163 RR----MPERNVVSWNTIIKALSECGRIEDAQWHFNQMRE---RDVKSWTTMVDGLAING 215
R + + ++VS+N++ S+ +++ + M + +V +++T +D +G
Sbjct: 118 RASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSG 177
Query: 216 RVDDARELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMP----SWN 267
+ A + F M NVV++ +I GY K L+ A+ L++ M M ++
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQAD 323
L+ GF + G++ RAE+++ M + N + +T ++ G+ Q G S+ A+K K+
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
T V + G C + L E +I + + K+ + + ++N Y K G +
Sbjct: 298 GMRLDITAYGVIISGLCGN-GKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKA 356
Query: 384 ARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLT 441
A ++ + + R + D+++ + MI A +G EAI F +ANDV Y L+
Sbjct: 357 AVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE-----KANDVMYTVLID 411
Query: 442 ACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVD 498
A G E + F K+ + + + + + + LC + G L +AF + + G+
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC-KQGNLVDAFKLKTRMVQEGLL 470
Query: 499 LSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPENAGTYSLLSNMYASVGKWKEAAN 556
L L + L+ G G + V ++L I P++A + LL Y G A++
Sbjct: 471 LDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA-VFDLLIRAYEKEGNMAAASD 529
Query: 557 VRMKMKDKGL 566
+ + M+ +GL
Sbjct: 530 LLLDMQRRGL 539
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 215/455 (47%), Gaps = 53/455 (11%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEARKLFD---- 100
N+ +S +C+ G++ A + MP E D+ + ++I+G+ G I+ A + +
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 101 --GPDAMKDVVTWTALVNGYVKLNQIEEA---ERLFYEMPERNVRSWNTMIDGYARNGQT 155
G D+V++ +L NG+ K+ ++E + + NV +++T ID + ++G+
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 156 EKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTM 207
+ AL F M NVV++ +I + G +E A + +MR +V ++T +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 208 VDGLAINGRVDDARELFDRM------PVRNVVSWNVMIKGYAKNRRLDEALELFERMPER 261
+DG G + A E++ RM P N + + +I G+ + D A++ +M +
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEP--NSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQ 297
Query: 262 ----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEA 313
D+ ++ +++G NG L A ++ +M + ++ + +T MM Y + G + A
Sbjct: 298 GMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAA 357
Query: 314 LKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVV-SALI 372
+ +++KL + +P+ T++ G+ + Q+H+ I +++ V+ + LI
Sbjct: 358 VNMYHKL-IERGFEPDVVALSTMID------GIAKNGQLHEAIVYFCIEKANDVMYTVLI 410
Query: 373 NMYSKCGELHIARRIF----DEGLLRQRDL-ISWNGMIAAYAHHGYGKEAINLFNKMQEL 427
+ K G+ R+F + GL+ + + SW IA G +A L +M +
Sbjct: 411 DALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW---IAGLCKQGNLVDAFKLKTRMVQE 467
Query: 428 GFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKN 462
G + + Y L+ + GL+ E Q FD++L +
Sbjct: 468 GLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNS 502
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 188/411 (45%), Gaps = 38/411 (9%)
Query: 24 IINGYPFLRTMSTSTSSLHSAMKDCN-------TSISRLCQEGRIDDARKLFDRMPERDL 76
+ NG+ ++ + + +K C+ T I C+ G + A K F M L
Sbjct: 135 LFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDAL 194
Query: 77 H----LWGTMINGYIMCGVIKEARKLFDGPDAMK---DVVTWTALVNGYVKLNQIEEAER 129
+ +I+GY G ++ A L+ ++ +VVT+TAL++G+ K +++ AE
Sbjct: 195 SPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEE 254
Query: 130 LFYEMPERNVRS----WNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALS 181
++ M E V + T+IDG+ + G ++ A+ +M + ++ ++ II L
Sbjct: 255 MYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLC 314
Query: 182 ECGRIEDAQWHFNQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVR----NVV 233
G++++A M + D+ +TTM++ +GR+ A ++ ++ R +VV
Sbjct: 315 GNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 234 SWNVMIKGYAKNRRLDEALELFERMPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKN 293
+ + MI G AKN +L EA+ F D+ + L+ + GD E+LF ++ +
Sbjct: 375 ALSTMIDGIAKNGQLHEAIVYFCIEKANDV-MYTVLIDALCKEGDFIEVERLFSKISEAG 433
Query: 294 VI----TWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEG 349
++ +T+ + G + G +A K+ ++ L + + T++ + + E
Sbjct: 434 LVPDKFMYTSWIAGLCKQGNLVDAFKLKTRM-VQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 350 QQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQRDLIS 400
+Q+ + + + V LI Y K G + A + + +++R L++
Sbjct: 493 RQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLD--MQRRGLVT 541
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 151/300 (50%), Gaps = 27/300 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAM--- 105
T ++ LC EGR+ A L DRM E +GT+ING G + A L +
Sbjct: 14 TTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKMEETHIK 73
Query: 106 KDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDL 161
VV + A+++ K A+ LF EM ++ +V +++ MID + R+G+ A L
Sbjct: 74 AHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQL 133
Query: 162 FRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDV----KSWTTMVDGLAI 213
R M ER +VV+++ +I AL + G++ +A+ + M R + ++ +M+DG
Sbjct: 134 LRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCK 193
Query: 214 NGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPS 265
R++DA+ + D M + +VV+++ +I GY K +R+D +E+F M R + +
Sbjct: 194 QDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 253
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
+ TL+ GF Q GDL+ A+ L + M N IT+ +M+ +A I LQ
Sbjct: 254 YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 136/266 (51%), Gaps = 21/266 (7%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQTEKALDLFRRMP 166
DVVT+T L+NG ++ +A L M E + + T+I+G + G TE AL+L +M
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 167 ER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVD 218
E +VV +N II L + G AQ F +M ++ DV +++ M+D +GR
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 219 DARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDM----PSWNTLV 270
DA +L M R +VV+++ +I K ++ EA E++ M R + ++N+++
Sbjct: 129 DAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 271 TGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
GF + LN A+++ M K +V+T++ ++ GY + + ++IF ++ +
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR-RGI 247
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQI 352
NT T+ T++ + L+ Q +
Sbjct: 248 VANTVTYTTLIHGFCQVGDLDAAQDL 273
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 131/323 (40%), Gaps = 50/323 (15%)
Query: 200 DVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMP 259
DV ++TT+++GL GRV A L DRM + +I G K + AL L +M
Sbjct: 9 DVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESALNLLSKME 68
Query: 260 ERDMPS----WNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSE 311
E + + +N ++ ++G A+ LF EM K +VIT++ M+ + + G
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWT 128
Query: 312 EALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSAL 371
+A ++ + + + P+ TF SAL
Sbjct: 129 DAEQLLRDM-IERQINPDVVTF-----------------------------------SAL 152
Query: 372 INMYSKCGELHIARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGF 429
IN K G++ A I+ + L R I++N MI + +A + + M
Sbjct: 153 INALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSC 212
Query: 430 QANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEA- 488
+ VT+ L+ A V+ G++ F ++ + R I Y L+ + G L A
Sbjct: 213 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR-RGIVANTVTYTTLIHGFCQVGDLDAAQ 271
Query: 489 --FNIIEGLGVDLSLSVWGPLLA 509
N++ GV + + +LA
Sbjct: 272 DLLNVMISSGVAPNYITFQSMLA 294
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 118/534 (22%), Positives = 243/534 (45%), Gaps = 80/534 (14%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEM----PERNVRSWNTMIDGYARNGQTEKALDLFR 163
+V+ ++ G + ++QIE A RL + P NV ++ T+I+G+ + G+ ++A DLF+
Sbjct: 252 IVSCNKVLKG-LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 164 RMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAING 215
M +R + ++++T+I + G + F+Q + DV +++ +D +G
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 216 RVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDM-PS---WN 267
+ A ++ RM + NVV++ ++IKG ++ R+ EA ++ ++ +R M PS ++
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYS 430
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQK----------------------------------- 292
+L+ GF + G+L L+ +M +
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 293 ----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL-------GACS 341
NV+ + +++ G+ + +EALK+F +L + +KP+ TF TV+ C
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEDAFCK 549
Query: 342 DLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFD---EGLLRQRDL 398
+ G Q+ L+ + V + +I++ KC + A + F+ EG + + D+
Sbjct: 550 HMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM-EPDI 607
Query: 399 ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDK 458
+++N MI Y EA +F ++ F N VT L+ ++ ++ F
Sbjct: 608 VTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF-S 666
Query: 459 LLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVHG 515
++ + + Y CL+D ++ ++ +F + E + G+ S+ + ++ G G
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRG 726
Query: 516 NADIGKLVAKKIL--KIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLK 567
D + + + K+ P+ Y++L Y VG+ EAA + M G+K
Sbjct: 727 RVDEATNIFHQAIDAKLLPDVVA-YAILIRGYCKVGRLVEAALLYEHMLRNGVK 779
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 113/230 (49%), Gaps = 50/230 (21%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEARKLFD--- 100
CN I L + RI+DA K F+ + E D+ + TMI GY + EA ++F+
Sbjct: 575 CNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLK 634
Query: 101 ----GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARN 152
GP+ VT T L++ K N ++ A R+F M E+ N ++ ++D ++++
Sbjct: 635 VTPFGPNT----VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690
Query: 153 GQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMV 208
E + LF M E+ ++VS++ II L + GR+++A F+Q
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ------------- 737
Query: 209 DGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALELFERM 258
AI+ ++ +P +VV++ ++I+GY K RL EA L+E M
Sbjct: 738 ---AIDAKL---------LP--DVVAYAILIRGYCKVGRLVEAALLYEHM 773
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 164/326 (50%), Gaps = 40/326 (12%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
N I+ LC+ R A + +M E D+ ++ING+ + ++FD D
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC------QGNRVFDAIDL 161
Query: 105 MK---------DVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYAR 151
+ DVV + +++G K+ + +A LF M VR ++N+++ G
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 152 NGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKS 203
+G+ A L R M R NV+++ +I + G+ +A + +M R DV +
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 204 WTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMP 259
+ ++++GL ++GRVD+A+++ D M + +VV++N +I G+ K++R+DE +LF M
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 260 ER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK-NVITWTAMMTGYVQHGLSEEAL 314
+R D ++NT++ G+ Q G + A+++F M + N+ T++ ++ G + E+AL
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKAL 401
Query: 315 KIFNKLQADHALKPNTGTFVTVLGAC 340
+F +Q T + + G C
Sbjct: 402 VLFENMQKSEIELDITTYNIVIHGMC 427
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 127/229 (55%), Gaps = 20/229 (8%)
Query: 52 ISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFD---GPDA 104
I +EG+ +A KL++ M R D+ + ++ING M G + EA+++ D
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALD 160
+ DVVT+ L+NG+ K +++E +LF EM +R + ++NT+I GY + G+ + A +
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQE 370
Query: 161 LFRRMPER-NVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAING 215
+F RM R N+ +++ ++ L R+E A F M+ E D+ ++ ++ G+ G
Sbjct: 371 IFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 216 RVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPE 260
V+DA +LF + + +VVS+ MI G+ + R+ D++ L+ +M E
Sbjct: 431 NVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 207/475 (43%), Gaps = 74/475 (15%)
Query: 124 IEEAERLFYEM----PERNVRSWNTMIDGYARNGQTEKALDLFRRMPE----RNVVSWNT 175
+EE LF +M P ++ ++ ++ A++ + + LF M ++ S+N
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 176 IIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPVR- 230
+I L C R A +M E DV + +++++G RV DA +L +M
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169
Query: 231 ---NVVSWNVMIKGYAKNRRLDEALELFERMPERD-----MPSWNTLVTGFIQNGDLNRA 282
+VV +N +I G K +++A+ELF+RM ERD ++N+LV G +G + A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 283 EKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
+L +M ++++ PN TF V+
Sbjct: 229 ARLMRDMVMRDIV--------------------------------PNVITFTAVIDVFVK 256
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFD----EGLLRQRDL 398
+E ++++ +++ + ++LIN G + A+++ D +G L D+
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL--PDV 314
Query: 399 ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDK 458
+++N +I + E LF +M + G + +TY ++ AG + + F +
Sbjct: 315 VTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSR 374
Query: 459 LLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLG---VDLSLSVWGPLLAGCNVHG 515
+ +I+ + L LC R+++A + E + ++L ++ + ++ G G
Sbjct: 375 MDSRPNIRT---YSILLYGLC-MNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 516 NA----DIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
N D+ + ++ K LK + +Y+ + + + +W ++ + KM++ GL
Sbjct: 431 NVEDAWDLFRSLSCKGLK---PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 189/408 (46%), Gaps = 54/408 (13%)
Query: 52 ISRLCQEGRIDDARKLFDRMPE----RDLHLWGTMINGYIMCGVIKEARKLFDG---PDA 104
++ LC +++ A LF+ M D++ + M++ + G+I++ARK F+
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALD 160
+VVT+TAL++ Y+K ++ A LF M N+ +++ +IDG+ + GQ EKA
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQ 609
Query: 161 LFRRMPERNVVSWNTIIKALSECGR--IEDAQWHFNQMRER----DVKSWTTMVDGLAIN 214
+F RM CG + D +F Q + +V ++ ++DG +
Sbjct: 610 IFERM-----------------CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 215 GRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMP----SW 266
RV++AR+L D M + N + ++ +I G K +LDEA E+ M E P ++
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTY 712
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
++L+ + + + A K+ +M + NV+ +T M+ G + G ++EA K+ ++
Sbjct: 713 SSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMME- 771
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+ +PN T+ ++ + + ++ + + + LI+ K G L
Sbjct: 772 EKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALD 831
Query: 383 IARRIFDEGLLRQRDLISWNGMIAAYAH--HGYGKEAINLFNKMQELG 428
+A + +E ++Q W A Y G+ KE I + E+G
Sbjct: 832 VAHNLLEE--MKQ---THWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 184/409 (44%), Gaps = 44/409 (10%)
Query: 127 AERLFYEMPERNVRSWNTMIDGYAR----NGQTEKALDLFRRMPERNVV----SWNTIIK 178
AE+ + EM V + + R G+ EKA + R M + + +++ ++
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 179 ALSECGRIEDAQWHFNQMRE----RDVKSWTTMVDGLAINGRVDDARELFDRM----PVR 230
L ++E A F +M+ DV ++T MVD G ++ AR+ F+ M
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTP 551
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERM-PERDMP---SWNTLVTGFIQNGDLNRAEKLF 286
NVV++ +I Y K +++ A ELFE M E +P +++ L+ G + G + +A ++F
Sbjct: 552 NVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 287 HEM--------------------PQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
M + NV+T+ A++ G+ + EEA K+ + + +
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME-GC 670
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
+PN + ++ + L+E Q++ +S+ F + Y S+LI+ Y K +A +
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730
Query: 387 IFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACS 444
+ + L +++ + MI G EA L M+E G Q N VTY ++
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 445 HAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIE 493
G +E L+ ++ + ++ + Y L+D C + G L A N++E
Sbjct: 791 MIGKIETCLELLER-MGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 135/303 (44%), Gaps = 41/303 (13%)
Query: 52 ISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDG---PDA 104
I LC+ G++D+A+++ M E L+ + ++I+ Y A K+
Sbjct: 681 IDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC 740
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALD 160
+VV +T +++G K+ + +EA +L M E+ NV ++ MIDG+ G+ E L+
Sbjct: 741 APNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLE 800
Query: 161 LFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGL----- 211
L RM + N V++ +I + G ++ A +M++ W T G
Sbjct: 801 LLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ---THWPTHTAGYRKVIE 857
Query: 212 AINGRVDDARELFDRM------PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM-- 263
N ++ L D + P +V + ++I K +RL+ AL L E +
Sbjct: 858 GFNKEFIESLGLLDEIGQDDTAPFLSV--YRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 264 ----PSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI----TWTAMMTGYVQHGLSEEALK 315
++N+L+ + A +LF EM +K VI ++ +++ G ++ EAL
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Query: 316 IFN 318
+ +
Sbjct: 976 LLD 978
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 122/519 (23%), Positives = 212/519 (40%), Gaps = 112/519 (21%)
Query: 143 NTMIDGYARNGQTEKALDL------FRRMPERNVVSWNTIIKALSECGRIEDAQWHFNQM 196
N ++ + RNG AL+ FR P R+ ++N +I+A + R++ A +M
Sbjct: 204 NVLVRKHCRNGSFSIALEELGRLKDFRFRPSRS--TYNCLIQAFLKADRLDSASLIHREM 261
Query: 197 -------------------------RER-----------DVKSWTTMVDGLAINGRVDDA 220
RE D +T ++ GL ++A
Sbjct: 262 SLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 221 RELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMP-ERDMPS---WNTLVTG 272
+ +RM + NVV+++ ++ G ++L + M E PS +N+LV
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 273 FIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHG----------------LSEEALKI 316
+ +GD + A KL +M + M GYV + L + A K
Sbjct: 382 YCTSGDHSYAYKLLKKMVK------CGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 317 FNKLQADHAL--KPNTGTFVTVLGACSDLAGLNEG--QQIHQLISKTAFQESTYVVSALI 372
++++ A + K N +F L CS AG E I ++I + F T S ++
Sbjct: 436 YSEMLAAGVVLNKINVSSFTRCL--CS--AGKYEKAFSVIREMIGQ-GFIPDTSTYSKVL 490
Query: 373 NMYSKCGELHIARRIFDE----GLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELG 428
N ++ +A +F+E GL+ D+ ++ M+ ++ G ++A FN+M+E+G
Sbjct: 491 NYLCNASKMELAFLLFEEMKRGGLVA--DVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548
Query: 429 FQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEA 488
N VTY L+ A A V + F+ +L + Y+ L+D +AG++++A
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLP-NIVTYSALIDGHCKAGQVEKA 607
Query: 489 FNIIEGL-------GVDL------------SLSVWGPLLAG-CNVHGNADIGKLV-AKKI 527
I E + VD+ ++ +G LL G C H + KL+ A +
Sbjct: 608 CQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSM 667
Query: 528 LKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
EP N Y L + VGK EA V+ +M + G
Sbjct: 668 EGCEP-NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGF 705
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 110/550 (20%), Positives = 219/550 (39%), Gaps = 102/550 (18%)
Query: 110 TWTALVNGYVKLNQIEEAERLFYEMPERNVRSWNTMIDGYA----RNGQTEKALDLFRR- 164
T+ L+ ++K ++++ A + EM N+R + +A + G+ +AL L
Sbjct: 237 TYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETE 296
Query: 165 --MPERNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVD 218
+P + V + +I L E E+A N+MR +V +++T++ G ++
Sbjct: 297 NFVP--DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLG 354
Query: 219 DARELFDRMPVRNVVS----WNVMIKGYAKNRRLDEALELFERMPE-RDMPSW---NTLV 270
+ + + M + +N ++ Y + A +L ++M + MP + N L+
Sbjct: 355 RCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILI 414
Query: 271 TGFIQNGD------LNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKL 320
+ D L+ AEK + EM V I ++ G E+A + ++
Sbjct: 415 GSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREM 474
Query: 321 QADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGE 380
P+T T+ VL + + + + + + + Y + +++ + K G
Sbjct: 475 IG-QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 381 LHIARRIFDEGLLRQ----RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
+ AR+ F+E +R+ +++++ +I AY A LF M G N VTY
Sbjct: 534 IEQARKWFNE--MREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Query: 437 VELLTACSHAGLVEEGLQYFDKLLKNRSI-------QVREDH--------YACLVDLCGR 481
L+ AG VE+ Q F+++ ++ + + +D+ Y L+D +
Sbjct: 592 SALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCK 651
Query: 482 AGRLKEAFNIIEGL---GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIE------P 532
+ R++EA +++ + G + + V+ L + G +GKL + +K E P
Sbjct: 652 SHRVEEARKLLDAMSMEGCEPNQIVYDAL-----IDGLCKVGKLDEAQEVKTEMSEHGFP 706
Query: 533 ENAGTYSLLSNMY-----------------------------------ASVGKWKEAANV 557
TYS L + Y VGK EA +
Sbjct: 707 ATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 766
Query: 558 RMKMKDKGLK 567
M++KG +
Sbjct: 767 MQMMEEKGCQ 776
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 134/620 (21%), Positives = 266/620 (42%), Gaps = 106/620 (17%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMP----ERDLHLWGTMINGYIMCGVIKEA----RKLFD 100
T +S LCQ G++D+ R L R+ E D + I+GY G + +A R++ +
Sbjct: 211 TTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVE 270
Query: 101 GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM----PERNVRSWNTMIDGYARNGQTE 156
+DVV+++ L++G K +EEA L +M E N+ ++ +I G + G+ E
Sbjct: 271 -KGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLE 329
Query: 157 KALDLFRRM----PERNVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMV 208
+A LF R+ E + + T+I + G + A M +R ++ ++ T++
Sbjct: 330 EAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVI 389
Query: 209 DGLAINGRVDDARELFDRMPVRNVVSWNVMIKGYAKNRRLDEALE--------------- 253
+GL + GRV +A E+ + V +V++++ ++ Y K + +D LE
Sbjct: 390 NGLCMAGRVSEADEV-SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLV 448
Query: 254 --------------------LFERMPERDM----PSWNTLVTGFIQNGDLNRAEKLFHEM 289
L+ MPE D+ ++ T++ G+ + G + A ++F+E+
Sbjct: 449 MCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Query: 290 PQKNV---ITWTAMMTGYVQHGLSEEALKIFNKL-------------QADHALKPNTGTF 333
+ +V + + ++ + G+ + A ++ +L H++ N G
Sbjct: 509 RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGD- 567
Query: 334 VTVLGACSDLAGLNE-------GQQIHQLISKTAFQES--------------TYVVSALI 372
+LG L LN I L + +F+ + T+ + L
Sbjct: 568 KGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILK 627
Query: 373 NMYSKCGELHIARRIFDEG--LLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
+ L + + G L D+I + +I G+ +A+NL + + G
Sbjct: 628 TLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVT 687
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFN 490
N +TY L+ G + E L+ FD L+N + E Y L+D + G +A
Sbjct: 688 LNTITYNSLINGLCQQGCLVEALRLFDS-LENIGLVPSEVTYGILIDNLCKEGLFLDAEK 746
Query: 491 IIEGL---GVDLSLSVWGPLLAG-CNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYA 546
+++ + G+ ++ ++ ++ G C + D ++V++K++ +A T S + Y
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 547 SVGKWKEAANVRMKMKDKGL 566
G +EA +V + KDK +
Sbjct: 807 KKGDMEEALSVFTEFKDKNI 826
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 119/554 (21%), Positives = 236/554 (42%), Gaps = 115/554 (20%)
Query: 50 TSISRLCQEGRIDDARKLFDRMPERDLH----LWGTMINGYIMCGVIKEARKLFDGPDAM 105
T I +C++G ++ A + M +R + + T+ING M G + EA ++ G +
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKG--VV 409
Query: 106 KDVVTWTALVNGYVKLNQIE-----------------------------------EAERL 130
DV+T++ L++ Y+K+ I+ EA+ L
Sbjct: 410 GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADAL 469
Query: 131 FYEMPERNVR----SWNTMIDGYARNGQTEKALDLFRRMPERNV---VSWNTIIKALSEC 183
+ MPE ++ ++ TMI GY + GQ E+AL++F + + +V V +N II AL +
Sbjct: 470 YRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCYNRIIDALCKK 529
Query: 184 GRIEDAQWHFNQMRER----DVKSWTTMVDGLAING----------------------RV 217
G ++ A ++ E+ D+ + T++ + NG +
Sbjct: 530 GMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGML 589
Query: 218 DDARELFDR-----------MPVR----NVVSWNVMIKGYAKN-RRLDEALELFE----R 257
+DA L + M +R V + ++K N R LD L +
Sbjct: 590 NDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETT 649
Query: 258 MPERDMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEA 313
+ D+ + ++ G + G L +A L + N IT+ +++ G Q G EA
Sbjct: 650 LSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEA 709
Query: 314 LKIFNKLQADHALKPNTGTF-VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI 372
L++F+ L+ + L P+ T+ + + C + L+ + + ++SK + + ++++
Sbjct: 710 LRLFDSLE-NIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSK-GLVPNIIIYNSIV 767
Query: 373 NMYSKCGELHIARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
+ Y K G+ A R+ ++ + D + + MI Y G +EA+++F + ++
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNIS 827
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSI-----------QVREDHYACLVDLC 479
A+ ++ L+ G +EE ++L + S+ E LV+LC
Sbjct: 828 ADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELC 887
Query: 480 GRAGRLKEAFNIIE 493
GR+ +A I++
Sbjct: 888 -EQGRVPQAIKILD 900
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 211/489 (43%), Gaps = 70/489 (14%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPER-----NVRSWNTMIDGYARNGQTEKALDL 161
D +A+++G+ K+ + E A F + N+ ++ T++ + G+ ++ DL
Sbjct: 170 DNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDL 229
Query: 162 FRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRE----RDVKSWTTMVDGLAI 213
RR+ E + V ++ I + G + DA +M E RDV S++ ++DGL+
Sbjct: 230 VRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSK 289
Query: 214 NGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERM----PERDMPS 265
G V++A L +M N++++ +I+G K +L+EA LF R+ E D
Sbjct: 290 EGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFL 349
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHA 325
+ TL+ G + G+LNRA + +M Q+ +
Sbjct: 350 YVTLIDGICRKGNLNRAFSMLGDMEQRGI------------------------------- 378
Query: 326 LKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIAR 385
+P+ T+ TV+ ++E ++ + + ST ++ + I + + L I R
Sbjct: 379 -QPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYST-LLDSYIKVQNIDAVLEIRR 436
Query: 386 RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSH 445
R + + DL+ N ++ A+ G EA L+ M E+ + TY ++
Sbjct: 437 RFLEAKI--PMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCK 494
Query: 446 AGLVEEGLQYFDKLLKNR-SIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSL 501
G +EE L+ F++L K+ S V Y ++D + G L A ++ L G+ L +
Sbjct: 495 TGQIEEALEMFNELRKSSVSAAV---CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDI 551
Query: 502 SVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSN----MYASVGKWKEAANV 557
LL ++H N K + + +E N+ + N + G ++ A V
Sbjct: 552 HTSRTLLH--SIHANGG-DKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEV 608
Query: 558 RMKMKDKGL 566
M M+ KGL
Sbjct: 609 YMIMRRKGL 617
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 145/310 (46%), Gaps = 20/310 (6%)
Query: 265 SWNTLVTGFIQNGDLNRAEKLFHEMPQKNV------ITWTAMMTGYVQHGLSEEALKIFN 318
++ +L+ F++ G+++ A ++ M KNV +A+++G+ + G E AL F
Sbjct: 136 TFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFE 195
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
L PN T+ T++ A L ++E + + + + F+ S I+ Y K
Sbjct: 196 SAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKG 255
Query: 379 GELHIA----RRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
G L A R + ++G+ RD++S++ +I + G +EA+ L KM + G + N +
Sbjct: 256 GALVDALMQDREMVEKGM--NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLI 313
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII-- 492
TY ++ G +EE F+++L + I+V E Y L+D R G L AF+++
Sbjct: 314 TYTAIIRGLCKMGKLEEAFVLFNRIL-SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGD 372
Query: 493 -EGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKW 551
E G+ S+ + ++ G + G V+K ++ + TYS L + Y V
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG----DVITYSTLLDSYIKVQNI 428
Query: 552 KEAANVRMKM 561
+R +
Sbjct: 429 DAVLEIRRRF 438
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 131/275 (47%), Gaps = 35/275 (12%)
Query: 30 FLRTMSTSTSSLHSA-MKDCNTSISRLCQEGRIDDARKLFDRMPERDLHL----WGTMIN 84
+L ++ ++L S + D I+ LC+EG + A L R + L + ++IN
Sbjct: 639 YLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN 698
Query: 85 GYIMCGVIKEARKLFDGPDAMKDV---VTWTALVNGYVKLNQIEEAERLFYEMPER---- 137
G G + EA +LFD + + V VT+ L++ K +AE+L M +
Sbjct: 699 GLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP 758
Query: 138 NVRSWNTMIDGYARNGQTEKALDLF-RRMPER---NVVSWNTIIKALSECGRIEDAQWHF 193
N+ +N+++DGY + GQTE A+ + R+M R + + +++IK + G +E+A F
Sbjct: 759 NIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVF 818
Query: 194 NQMRERDVKS----WTTMVDGLAINGRVDDARELFDRMPVRNVV-----------SWNVM 238
+ +++++ + + ++ G GR+++AR L M V V + +
Sbjct: 819 TEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESES 878
Query: 239 IKGY----AKNRRLDEALELFERMPERDMPSWNTL 269
I+G+ + R+ +A+++ + + PS L
Sbjct: 879 IRGFLVELCEQGRVPQAIKILDEISSTIYPSGKNL 913
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 113/478 (23%), Positives = 217/478 (45%), Gaps = 71/478 (14%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERD------------------------LHLW----- 79
+T I+ L + G++DDA +LFD M ER + LW
Sbjct: 188 STVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLE 247
Query: 80 -----------GTMINGYIMCGVIKEARKLFD---GPDAMKDVVTWTALVNGYVKLNQIE 125
MI+G CG + + K+++ + KD+ T+++L++G ++
Sbjct: 248 DSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVD 307
Query: 126 EAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRMPERN---VVSWNTIIK 178
+AE +F E+ ER +V ++NTM+ G+ R G+ +++L+L+R M +N +VS+N +IK
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIK 367
Query: 179 ALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVR---- 230
L E G+I++A + M + D ++ + GL +NG V+ A + +
Sbjct: 368 GLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHL 427
Query: 231 NVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFIQNGDLNRAEKLF 286
+V ++ +I K +RL+EA L + M E + N L+ G I++ L A
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 287 HEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVL-GACS 341
EM + V+++ ++ G + G EA F K ++ KP+ T+ +L G C
Sbjct: 488 REMGKNGCRPTVVSYNILICGLCKAGKFGEA-SAFVKEMLENGWKPDLKTYSILLCGLCR 546
Query: 342 DLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ--RDLI 399
D + HQ + ++ + + + LI+ G+L A + R +L+
Sbjct: 547 DRKIDLALELWHQFL-QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 400 SWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFD 457
++N ++ + G A ++ M ++G Q + ++Y ++ V +++FD
Sbjct: 606 TYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFD 663
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/489 (22%), Positives = 220/489 (44%), Gaps = 66/489 (13%)
Query: 38 TSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIK 93
T+ + ++ N I C++ + AR D M + D+ + T+IN G +
Sbjct: 142 TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201
Query: 94 EARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGY 149
+A +LFD EM ER +V +N +IDG+
Sbjct: 202 DALELFD--------------------------------EMSERGVAPDVTCYNILIDGF 229
Query: 150 ARNGQTEKALDLFRRMPER-----NVVSWNTIIKALSECGRIEDAQWHFNQM----RERD 200
+ + A++L+ R+ E NV + N +I LS+CGR++D + +M RE+D
Sbjct: 230 LKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKD 289
Query: 201 VKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFE 256
+ ++++++ GL G VD A +F+ + R +VV++N M+ G+ + ++ E+LEL+
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR 349
Query: 257 RMPER---DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGL 309
M + ++ S+N L+ G ++NG ++ A ++ MP K + T+ + G +G
Sbjct: 350 IMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 310 SEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVS 369
+AL + ++++ + + +++ L E + + +SK + +++V +
Sbjct: 410 VNKALGVMQEVESSGG-HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCN 468
Query: 370 ALINMY---SKCGELHIARRIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQE 426
ALI S+ GE R + R ++S+N +I G EA +M E
Sbjct: 469 ALIGGLIRDSRLGEASFFLREMGKNGCRPT-VVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 427 LGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLK 486
G++ + TY LL ++ L+ + + L++ H + LC G+L
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCS-VGKLD 586
Query: 487 EAFNIIEGL 495
+A ++ +
Sbjct: 587 DAMTVMANM 595
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/427 (22%), Positives = 193/427 (45%), Gaps = 65/427 (15%)
Query: 113 ALVNGYVKLNQIEEAERLFYEM-----PERNVRSWNTMIDGYARNGQTEKALDLFRRMPE 167
+++ Y K + ++A +F M E +RS+NT+++ + Q K LF
Sbjct: 83 SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142
Query: 168 R----NVVSWNTIIKALSECGRIEDAQ----WHFNQMRERDVKSWTTMVDGLAINGRVDD 219
N+ ++N +IK + E A+ W + + + DV S++T+++ LA G++DD
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202
Query: 220 ARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER-----DMPSWNTLV 270
A ELFD M R +V +N++I G+ K + A+EL++R+ E ++ + N ++
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262
Query: 271 TGFIQNGDLNRAEKLFHEMPQ----KNVITWTAMMTGYVQHGLSEEALKIFNKLQADHAL 326
+G + G ++ K++ M Q K++ T+++++ G G ++A +FN+L A
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA- 321
Query: 327 KPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARR 386
+ T+ T+LG + E ++ +++
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK--------------------------- 354
Query: 387 IFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHA 446
+++S+N +I +G EA ++ M G+ A+ TY +
Sbjct: 355 -------NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVN 407
Query: 447 GLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GVDLSLSV 503
G V + L + +++ + YA ++D + RL+EA N+++ + GV+L+ V
Sbjct: 408 GYVNKALGVMQE-VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHV 466
Query: 504 WGPLLAG 510
L+ G
Sbjct: 467 CNALIGG 473
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 174/351 (49%), Gaps = 50/351 (14%)
Query: 15 PKLKTHPTFIINGYPFLRTMSTSTSSLHSAMKD---CNTSISRLCQE-----GRIDDARK 66
P+ T+ T IIN Y R S L KD N L E G++ DA K
Sbjct: 257 PEAYTYNT-IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 67 LFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFD-------GPDAMKDVVTWTALV 115
LFD M ER D+H++ ++I+ G +K A LFD P + T+ AL+
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSY----TYGALI 371
Query: 116 NGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFRRMPER--- 168
+G K+ ++ AE L EM + V +NT+IDGY R G ++A ++ M ++
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQ 431
Query: 169 -NVVSWNTIIKALSECGRIEDA-QWHFNQMRERDVK----SWTTMVDGLAINGRVDDARE 222
+V + NTI + R ++A QW F +M E VK S+T ++D G V++A+
Sbjct: 432 ADVFTCNTIASCFNRLKRYDEAKQWLF-RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 223 LFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMP----ERDMPSWNTLVTGFI 274
LF M + N +++NVMI Y K ++ EA +L M + D ++ +L+ G
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 275 QNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQ 321
+++ A +LF EM K N +T+T M++G + G S+EA ++++++
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMK 601
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 176/381 (46%), Gaps = 32/381 (8%)
Query: 139 VRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIKALSECGRIEDAQWHFN 194
V S +++G R G+ EK+ L + + + ++NTII A + +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLK 283
Query: 195 QMRERDVK----SWTTMVDGLAINGRVDDARELFDRMPVRNVVS----WNVMIKGYAKNR 246
M++ V ++T +++ NG++ DA +LFD M R + S + +I +
Sbjct: 284 VMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 247 RLDEALELFERMPERDM-PS---WNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWT 298
+ A LF+ + E+ + PS + L+ G + G++ AE L +EM K V + +
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 299 AMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
++ GY + G+ +EA I++ ++ + + T T+ + L +E +Q + +
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVME-QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMME 462
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKE 416
+ ST + LI++Y K G + A+R+F E + Q + I++N MI AY G KE
Sbjct: 463 GGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKE 522
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKL----LKNRSIQVREDHY 472
A L M+ G + TY L+ A V+E ++ F ++ L S+ Y
Sbjct: 523 ARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVT-----Y 577
Query: 473 ACLVDLCGRAGRLKEAFNIIE 493
++ +AG+ EAF + +
Sbjct: 578 TVMISGLSKAGKSDEAFGLYD 598
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 203/444 (45%), Gaps = 30/444 (6%)
Query: 149 YARNGQTEKALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRERDVK-- 202
Y NG E+ L +F M ++ + S + A + RI+ F +M + VK
Sbjct: 164 YVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 203 --SWTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFE 256
S T +V+GL G V+ +++L V+ + ++N +I Y K R +E
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDF-SGVEGVL 282
Query: 257 RMPERDMPSWNTLVTGF-----IQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQH 307
++ ++D +N + ++NG ++ AEKLF EM ++ +V +T++++ +
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 308 GLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYV 367
G + A +F++L + L P++ T+ ++ + + + + + + V
Sbjct: 343 GNMKRAFLLFDEL-TEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 368 VSALINMYSKCGELHIARRIFD--EGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQ 425
+ LI+ Y + G + A I+D E Q D+ + N + + + EA +M
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 426 ELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRL 485
E G + + V+Y L+ G VEE + F ++ ++ +Q Y ++ + G++
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM-SSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 486 KEAFNI---IEGLGVDLSLSVWGPLLAGCNVHGNADIG-KLVAKKILKIEPENAGTYSLL 541
KEA + +E G+D + L+ G + N D +L ++ LK +N+ TY+++
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 542 SNMYASVGKWKEAANVRMKMKDKG 565
+ + GK EA + +MK KG
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKG 604
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 123/246 (50%), Gaps = 23/246 (9%)
Query: 52 ISRLCQEGRIDDARKLFDRMPERDLHL----WGTMINGYIMCGVIKEARKLFDGPDA--- 104
I +C+ G + A L + M + +++ + T+I+GY G++ EA ++D +
Sbjct: 371 IDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGF 430
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEKALD 160
DV T + + + +L + +EA++ + M E V+ S+ +ID Y + G E+A
Sbjct: 431 QADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKR 490
Query: 161 LFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLA 212
LF M + N +++N +I A + G+I++A+ M + D ++T+++ G
Sbjct: 491 LFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGEC 550
Query: 213 INGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMPSWNT 268
I VD+A LF M ++ N V++ VMI G +K + DEA L++ M + N
Sbjct: 551 IADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNK 610
Query: 269 LVTGFI 274
+ T I
Sbjct: 611 VYTALI 616
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 164/380 (43%), Gaps = 38/380 (10%)
Query: 214 NGRVDDARELFDRMPVRNVV----SWNVMIKGYAKNRRLDEALELFERMPERDMP----S 265
NG ++ +FD M + + S V + K RR+D LE+F RM + + S
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYS 226
Query: 266 WNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYV-QHGLS--EEALKIFN 318
+V G + G++ +++KL E K + T+ ++ YV Q S E LK+
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 319 KLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKC 378
K + N T+ ++ +++ +++ + + + +V ++LI+ +
Sbjct: 287 K----DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRK 342
Query: 379 GELHIARRIFDEGLLRQRDL----ISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
G + A +FDE L ++ L ++ +I G A L N+MQ G V
Sbjct: 343 GNMKRAFLLFDE--LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQV 400
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC--LVDLCGRAGRLKEA---- 488
+ L+ G+V+E +D +++ + Q D + C + R R EA
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYD-VMEQKGFQA--DVFTCNTIASCFNRLKRYDEAKQWL 457
Query: 489 FNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGK--LVAKKILKIEPENAGTYSLLSNMYA 546
F ++EG GV LS + L+ GN + K V ++P NA TY+++ Y
Sbjct: 458 FRMMEG-GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQP-NAITYNVMIYAYC 515
Query: 547 SVGKWKEAANVRMKMKDKGL 566
GK KEA +R M+ G+
Sbjct: 516 KQGKIKEARKLRANMEANGM 535
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 139/600 (23%), Positives = 270/600 (45%), Gaps = 90/600 (15%)
Query: 52 ISRLCQEGRIDDARKLFDRMPER--DLHL--WGTMINGYIMCGVIKEA---RKLFDGPDA 104
I LC+ + A+++ M D+++ + +I+G + EA +K G D
Sbjct: 234 IRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL 293
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEM------PERNVRSWNTMIDGYARNGQTEKA 158
DVVT+ LV G K+ + E + EM P S ++++G + G+ E+A
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVS--SLVEGLRKRGKIEEA 351
Query: 159 LDLFRRMPE----RNVVSWNTIIKALSECGRIEDAQWHFNQM-----RERDVKSWTTMVD 209
L+L +R+ + N+ +N +I +L + + +A+ F++M R DV +++ ++D
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDV-TYSILID 410
Query: 210 GLAINGRVDDAR----ELFDRMPVRNVVSWNVMIKGYAKNRRLDEA----LELFERMPER 261
G++D A E+ D +V +N +I G+ K + A E+ + E
Sbjct: 411 MFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEP 470
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIF 317
+ ++ +L+ G+ G +N+A +L+HEM K ++ T+T +++G + GL +A+K+F
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 318 NKLQADHALKPNTGTF-VTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
N++ A+ +KPN T+ V + G C + +++ + + +++ TY LI+
Sbjct: 531 NEM-AEWNVKPNRVTYNVMIEGYCEE-GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 377 KCGELHIARRIFDEGLLR---QRDLISWNGMIAAYAHHGYGKEAIN-------------- 419
G+ A ++F +GL + + + I + G++ + G +EA++
Sbjct: 589 LTGQASEA-KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 420 ---------------------LFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDK 458
L +M + G + +DV Y ++ A S G +E +D
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD- 706
Query: 459 LLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNV----H 514
L+ N E Y +++ +AG + EA + + SV + GC +
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM--QPVSSVPNQVTYGCFLDILTK 764
Query: 515 GNADIGKLVA--KKILKIEPENAGTYSLLSNMYASVGKWKEAANVRMKMKDKGLKKQPGC 572
G D+ K V ILK N TY++L + G+ +EA+ + +M G+ P C
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGV--SPDC 822
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 204/451 (45%), Gaps = 44/451 (9%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLH----LWGTMINGYIMCGVIKEARKLF---DG 101
N+ I+ C+ G I A M + L + +++ GY G I +A +L+ G
Sbjct: 441 NSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEK 157
+ T+T L++G + I +A +LF EM E NV+ ++N MI+GY G K
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 158 ALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVD 209
A + + M E+ +V S+ +I L G+ +A+ + + + + + +T ++
Sbjct: 561 AFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLH 620
Query: 210 GLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPERDMPS 265
G G++++A + M R V V + V+I G K++ L + M +R +
Sbjct: 621 GFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKP 680
Query: 266 WNTLVTGFI----QNGDLNRA----EKLFHEMPQKNVITWTAMMTGYVQHGLSEEALKIF 317
+ + T I + GD A + + +E N +T+TA++ G + G EA +
Sbjct: 681 DDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLC 740
Query: 318 NKLQADHALKPNT---GTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
+K+Q ++ PN G F+ +L + + ++H I K +T + LI
Sbjct: 741 SKMQPVSSV-PNQVTYGCFLDILTKGE--VDMQKAVELHNAILK-GLLANTATYNMLIRG 796
Query: 375 YSKCGELHIAR----RIFDEGLLRQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
+ + G + A R+ +G+ D I++ MI K+AI L+N M E G +
Sbjct: 797 FCRQGRIEEASELITRMIGDGV--SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLK 461
+ V Y L+ C AG + + + +++L+
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/511 (21%), Positives = 217/511 (42%), Gaps = 76/511 (14%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDL-------------------------------- 76
N I LC+ + +A LFDRM + L
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430
Query: 77 -------HLWGTMINGYIMCGVIKEARKLFDGPDAMK---DVVTWTALVNGYVKLNQIEE 126
+ + ++ING+ G I A K VVT+T+L+ GY +I +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 127 AERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRMPERNV----VSWNTIIK 178
A RL++EM + ++ ++ T++ G R G A+ LF M E NV V++N +I+
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 179 ALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAINGRVDDARELFDRMPVRNV-- 232
E G + A +M E+ D S+ ++ GL + G+ +A+ D + N
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 233 --VSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLF 286
+ + ++ G+ + +L+EAL + + M +R D+ + L+ G +++ D L
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 287 HEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSD 342
EM + + + +T+M+ + G +EA I++ L + PN T+ V+
Sbjct: 671 KEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWD-LMINEGCVPNEVTYTAVINGLCK 729
Query: 343 LAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHIARRI-----FDEGLLRQRD 397
+NE + + + + + +++ +K GE+ + + + +GLL +
Sbjct: 730 AGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHNAILKGLL--AN 786
Query: 398 LISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFD 457
++N +I + G +EA L +M G + +TY ++ V++ ++ ++
Sbjct: 787 TATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWN 846
Query: 458 KLLKNRSIQVREDHYACLVDLCGRAGRLKEA 488
+ + + I+ Y L+ C AG + +A
Sbjct: 847 SMTE-KGIRPDRVAYNTLIHGCCVAGEMGKA 876
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/344 (20%), Positives = 141/344 (40%), Gaps = 97/344 (28%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDG--- 101
N I C+EG + A + M E+ D + + +I+G + G EA+ DG
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEA-------------------------------ERL 130
+ + + +T L++G+ + ++EEA +L
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 131 FY----EMPERNVRS----WNTMIDGYARNGQTEKALDLFRRMPER----NVVSWNTIIK 178
F+ EM +R ++ + +MID ++ G ++A ++ M N V++ +I
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVIN 725
Query: 179 ALSECGRIEDAQWHFNQMR---------------------ERDVK--------------- 202
L + G + +A+ ++M+ E D++
Sbjct: 726 GLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLA 785
Query: 203 ---SWTTMVDGLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELF 255
++ ++ G GR+++A EL RM V +++ MI + + +A+EL+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 256 ERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI 295
M E+ D ++NTL+ G G++ +A +L +EM ++ +I
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 126/502 (25%), Positives = 231/502 (46%), Gaps = 72/502 (14%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLH----LWGTMINGYIMCGVIKEARK---LFDG 101
NT + + ++GR+ D ++L M + L + ++ GY G +KEA + L
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 102 PDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMP----ERNVRSWNTMIDGYARNGQTEK 157
+ + D+ T+ L+NG + E L M + +V ++NT+IDG G + +
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 158 ALDLFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER-----DVKSWTTMV 208
A L +M + N V+ N +K L + + E ++ + D+ ++ T++
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 209 DGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER--- 261
G + A E+ M + N ++ N ++ K R+LDEA L +R
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 262 -DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQ----KNVITWTAMMTGYVQHGLSEEALKI 316
D ++ TL+ GF + + +A +++ EM + V T+ +++ G HG +E A++
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 317 FNKLQADHALKPNTGTFVTV-LGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMY 375
F++L A+ L P+ TF ++ LG C + + + + + K +F+ Y + L+N
Sbjct: 544 FDEL-AESGLLPDDSTFNSIILGYCKE-GRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Query: 376 SKCGELHIARRIFDEGLLRQR--DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAND 433
K G A F+ L+ +R D +++N MI+A+ KEA +L ++M+E G + +
Sbjct: 602 CKEGMTEKALNFFN-TLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDR 660
Query: 434 VTYVELLTACSHAGLVEEG-LQYFDKLLK---------NRSIQVREDH------------ 471
TY ++ L+E+G L D+LLK R +QV +
Sbjct: 661 FTYNSFISL-----LMEDGKLSETDELLKKFSGKFGSMKRDLQVETEKNPATSESKEELN 715
Query: 472 -----YACLVD-LCGRAGRLKE 487
Y+ ++D LC R GRLKE
Sbjct: 716 TEAIAYSDVIDELCSR-GRLKE 736
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 127/561 (22%), Positives = 238/561 (42%), Gaps = 95/561 (16%)
Query: 72 PERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMK---DVVTWTALVNGYVKLNQ---IE 125
P L+ ++ Y+ G A ++F +K +++T L+ G V+ I
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 126 EAERLFYEMPE----RNVRSWNTMIDGYARNGQTEKALDLFRRMPER-----NVVSWNTI 176
A +F +M + NV+++N +++GY G+ E AL + RM + V++NTI
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 177 IKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAINGRVDDARELFDRMPVRNVVSWN 236
+KA+S+ GR+ D + M++ +GL V N V++N
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKK----------NGL-----------------VPNRVTYN 279
Query: 237 VMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRAEKLFHEMP-- 290
++ GY K L EA ++ E M + D+ ++N L+ G G + +L M
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 291 --QKNVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTF-VTVLGACSDLAGLN 347
Q +V+T+ ++ G + GLS EA K+ +++ D +K N T +++ C +
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND-GVKANQVTHNISLKWLCKEEKREA 398
Query: 348 EGQQIHQLISKTAFQESTYVVSALINMYSKCGE----LHIARRIFDEGLLRQRDLISWNG 403
+++ +L+ F LI Y K G+ L + R + +G+ + + I+ N
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGI--KMNTITLNT 456
Query: 404 MIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNR 463
++ A EA NL N + GF ++VTY L+ VE+ L+ +D++ K +
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVK 516
Query: 464 SIQVREDHYACLVDLC--GRAGRLKEAFNIIEGLGVDLSLSVWGPLLAG----------- 510
+ + LC G+ E F+ + G+ S + ++ G
Sbjct: 517 ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Query: 511 -----------------CNVHGNADIGKLVAKKILK-----IEPE--NAGTYSLLSNMYA 546
CN+ N + + +K L IE + TY+ + + +
Sbjct: 577 EFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFC 636
Query: 547 SVGKWKEAANVRMKMKDKGLK 567
K KEA ++ +M++KGL+
Sbjct: 637 KDKKLKEAYDLLSEMEEKGLE 657
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 175/360 (48%), Gaps = 29/360 (8%)
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPE----RNVRSWNTMIDGYARNGQTEKALDLFR 163
+VT +L+NG+ + N+ +EA L M NV +NT+I+G +N AL++F
Sbjct: 149 IVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY 208
Query: 164 RMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAING 215
M ++ + V++NT+I LS GR DA M +R +V +T ++D G
Sbjct: 209 CMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEG 268
Query: 216 RVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWN 267
+ +AR L+ M R NV ++N +I G+ + L +A +F+ M + D+ ++N
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQKNVI----TWTAMMTGYVQHGLSEEALKIFNKLQAD 323
TL+TGF ++ + KLF EM + ++ T+ ++ GY Q G A K+FN++ D
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRM-VD 387
Query: 324 HALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELHI 383
+ P+ T+ +L + + + + + + K+ + +I + +L
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 384 ARRIFDEGLLRQ---RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
A +F L R+ D I++ MI+ G +EA L +M+E GF ++ Y E L
Sbjct: 448 AWCLF-RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 161/308 (52%), Gaps = 35/308 (11%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
NT I+ LC+ +++A ++F M ++ D + T+I+G G +A +L D
Sbjct: 188 NTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLL--RDM 245
Query: 105 MK-----DVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQT 155
+K +V+ +TAL++ +VK + EA L+ EM R NV ++N++I+G+ +G
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 156 EKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTM 207
A +F M + +VV++NT+I + R+ED F +M + D ++ T+
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 208 VDGLAINGRVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDM 263
+ G G+++ A+++F+RM ++V++N+++ N ++++AL + E + + +M
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 264 P----SWNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALK 315
++N ++ G + L A LF + +K V I + M++G + GL EA K
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 316 IFNKLQAD 323
+ +++ D
Sbjct: 486 LCRRMKED 493
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 185/402 (46%), Gaps = 34/402 (8%)
Query: 123 QIEEAERLFYEM----PERNVRSWNTMIDGYARNGQTEKALDLFRRMP----ERNVVSWN 174
+ ++A LF EM P ++ + ++ A+ + + + L+ +M ++ S+
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 175 TIIKALSECGRIEDAQWHFNQMRE----RDVKSWTTMVDGLAINGRVDDARELFDRMP-- 228
+I C R+ A +M + + + ++++G R +A L D M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 229 --VRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWNTLVTGFIQNGDLNRA 282
V NVV +N +I G KNR L+ ALE+F M ++ D ++NTL++G +G A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 283 EKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLG 338
+L +M ++ NVI +TA++ +V+ G EA ++ ++ ++ PN T+ +++
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM-IRRSVVPNVFTYNSLIN 297
Query: 339 ACSDLAGLNEGQQIHQL-ISKTAFQESTYVVSALINMYSKCGELHIARRIFDE----GLL 393
L + + + L +SK F + + LI + K + ++F E GL+
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPD-VVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLV 356
Query: 394 RQRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGL 453
D ++N +I Y G A +FN+M + G + VTY LL + G +E+ L
Sbjct: 357 G--DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKAL 414
Query: 454 QYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL 495
+ L K+ + V Y ++ R +LKEA+ + L
Sbjct: 415 VMVEDLQKS-EMDVDIITYNIIIQGLCRTDKLKEAWCLFRSL 455
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 119/238 (50%), Gaps = 24/238 (10%)
Query: 52 ISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFD---GPDA 104
I +EG + +AR L+ M R ++ + ++ING+ + G + +A+ +FD
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 105 MKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALD 160
DVVT+ L+ G+ K ++E+ +LF EM + + ++NT+I GY + G+ A
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 161 LFRRMPE----RNVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLA 212
+F RM + ++V++N ++ L G+IE A +++ D+ ++ ++ GL
Sbjct: 381 VFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 440
Query: 213 INGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPERD-MPS 265
++ +A LF + + V +++ MI G + EA +L RM E MPS
Sbjct: 441 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 163/355 (45%), Gaps = 77/355 (21%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER-----DLHLWGTMINGYIMCGVIKEARKLFD--- 100
N + C+EGR++DA M + D + + T++NG G +K A ++ D
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 101 --GPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQ 154
G D DV T+ ++++G KL +++EA + +M R N ++NT+I + Q
Sbjct: 323 QEGYDP--DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 155 TEKALDLFRRMPERNVV---------------------------------------SWNT 175
E+A +L R + + ++ ++N
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 176 IIKALSECGRIEDAQWHFNQMR----ERDVKSWTTMVDGLAINGRVDDARELFDRMPV-- 229
+I +L G++++A QM R V ++ T++DG + +A E+FD M V
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 230 --RNVVSWNVMIKGYAKNRRLDEALELFERM----PERDMPSWNTLVTGFIQNGDLNRAE 283
RN V++N +I G K+RR+++A +L ++M + D ++N+L+T F + GD+ +A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 284 KLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKIFNKLQ------ADHALKP 328
+ M + +++T+ +++G + G E A K+ +Q HA P
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNP 615
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/520 (20%), Positives = 223/520 (42%), Gaps = 56/520 (10%)
Query: 54 RLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTW-- 111
RL + G DD +K+ + M + G ++ E+ F+ D + VV W
Sbjct: 92 RLGRSGSFDDMKKILEDMKSSRCEM------GTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 112 ----------------TALVNG-YVKLNQIEEAERLFYEMPERNVRSWNTMIDGYARNGQ 154
LV+G +KL +I A+ + + + +V ++N +I R Q
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI-KPDVSTFNVLIKALCRAHQ 204
Query: 155 TEKALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWT----- 205
A+ + MP +V ++ T+++ E G ++ A QM E SW+
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC-SWSNVSVN 263
Query: 206 TMVDGLAINGRVDDARELFDRMPVRN-----VVSWNVMIKGYAKNRRLDEALELFERMPE 260
+V G GRV+DA M ++ ++N ++ G K + A+E+ + M +
Sbjct: 264 VIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ 323
Query: 261 R----DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEE 312
D+ ++N++++G + G++ A ++ +M + N +T+ +++ + EE
Sbjct: 324 EGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEE 383
Query: 313 ALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALI 372
A ++ L + L P+ TF +++ ++ + + + + + LI
Sbjct: 384 ATELARVLTSKGIL-PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 373 NMYSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
+ G+L A + + L R +I++N +I + +EA +F++M+ G
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVS 502
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFN 490
N VTY L+ + VE+ Q D+++ + + + L C R G +K+A +
Sbjct: 503 RNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFC-RGGDIKKAAD 561
Query: 491 IIEGL---GVDLSLSVWGPLLAGCNVHGNADIGKLVAKKI 527
I++ + G + + +G L++G G ++ + + I
Sbjct: 562 IVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 111/241 (46%), Gaps = 28/241 (11%)
Query: 49 NTSISRLCQEGRIDDARKLFDRM----PERDLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
NT I LC+ R++DA +L D+M + D + + +++ + G IK+A + +
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568
Query: 105 ---MKDVVTWTALVNGYVKLNQIEEAERLFYEMPERNV----RSWNTMIDGYARNGQTEK 157
D+VT+ L++G K ++E A +L + + + ++N +I G R +T +
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628
Query: 158 ALDLFRRMPERN-----VVSWNTIIKALSE-CGRIEDAQWHFNQMRER----DVKSWTTM 207
A++LFR M E+N VS+ + + L G I +A ++ E+ + S +
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688
Query: 208 VDGLAINGRVDDARELFDRMPVRNVVSWN--VMIKGYAKNRRLDEALE-----LFERMPE 260
+GL + +L + + + S M+KG K R+ +AL L R P
Sbjct: 689 AEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPR 748
Query: 261 R 261
R
Sbjct: 749 R 749
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/554 (22%), Positives = 241/554 (43%), Gaps = 72/554 (12%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
T+I+ C+ G++++A KLF +M E ++ + T+I+G MCG EA F +
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA---FMFKEK 320
Query: 105 MKD------VVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQ 154
M + ++T++ LV G + +I +A + EM ++ NV +N +ID + G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 155 TEKALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTT 206
KA+++ M + + ++NT+IK + G+ ++A+ +M S+T+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 207 MVDGLAINGRVDDARELFDRMPVRNVVS----WNVMIKGYAKNRRLDEALELFERMPER- 261
++ L + D A M +RN+ +I G K+ + +ALEL+ + +
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 262 ---DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI----TWTAMMTGYVQHGLSEEAL 314
D + N L+ G + G L+ A ++ E+ + + ++ +++G +EA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
+++ LKP+ T+ ++ ++ + E Q + Y S +I+
Sbjct: 561 MFLDEM-VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 375 YSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
K + FDE + + Q + + +N +I AY G A+ L M+ G N
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII 492
TY L+ S VEE F++ ++ ++ HY L+D G+ G++ + ++
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEE-MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 493 EGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWK 552
+ NVH N KI TY+++ YA G
Sbjct: 739 REMHSK-------------NVHPN---------KI---------TYTVMIGGYARDGNVT 767
Query: 553 EAANVRMKMKDKGL 566
EA+ + +M++KG+
Sbjct: 768 EASRLLNEMREKGI 781
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 229/491 (46%), Gaps = 34/491 (6%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLF 162
DV +T +N + K ++EEA +LF +M E NV ++NT+IDG G+ ++A
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 163 RRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAIN 214
+M ER +++++ ++K L+ RI DA + +M ++ +V + ++D
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 215 GRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPE----RDMPSW 266
G ++ A E+ D M + + ++N +IKGY KN + D A L + M + S+
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVIT----WTAMMTGYVQHGLSEEALKIFNKLQA 322
+++ + + A + EM +N+ T +++G +HG +AL+++ +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF-L 497
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+ +T T +L + L+E +I + I + LI+ +L
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 383 IARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
A DE + R + D +++ +I + +EAI ++ + G + TY ++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 441 TACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GV 497
C A EEG ++FD+++ ++++Q Y L+ R+GRL A + E + G+
Sbjct: 618 DGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 498 DLSLSVWGPLLAGCNVHGNADIGKLVAK--KILKIEPENAGTYSLLSNMYASVGKWKEAA 555
+ + + L+ G ++ + KL+ + ++ +EP N Y+ L + Y +G+ +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQMVKVE 735
Query: 556 NVRMKMKDKGL 566
+ +M K +
Sbjct: 736 CLLREMHSKNV 746
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 209/467 (44%), Gaps = 55/467 (11%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHL----WGTMINGYIMCGVIKEARKLFDGPDA 104
N I + G ++ A ++ D M + L L + T+I GY G A +L +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 105 MKDVV---TWTALVNGYVKLNQIEEAERLFYEMPERNVRS----WNTMIDGYARNGQTEK 157
+ V ++T+++ + A R EM RN+ T+I G ++G+ K
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 158 ALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
AL+L+ + + V + N ++ L E G++++A ++ R D S+ T++
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 210 GLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPER---- 261
G ++D+A D M R + +++++I G +++EA++ ++
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIF 317
D+ +++ ++ G + ++ F EM KNV + + ++ Y + G AL++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
++ + PN+ T+ +++ S ++ + E + + + + + + + +ALI+ Y K
Sbjct: 669 EDMK-HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 378 CGELHIARRIFDEGLLRQR-------DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
G++ + E LLR+ + I++ MI YA G EA L N+M+E G
Sbjct: 728 LGQM-----VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD 477
+ +TY E + G V E + D E++YA +++
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFKGSD-----------EENYAAIIE 818
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/554 (22%), Positives = 241/554 (43%), Gaps = 72/554 (12%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
T+I+ C+ G++++A KLF +M E ++ + T+I+G MCG EA F +
Sbjct: 264 TTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA---FMFKEK 320
Query: 105 MKD------VVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQ 154
M + ++T++ LV G + +I +A + EM ++ NV +N +ID + G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 155 TEKALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTT 206
KA+++ M + + ++NT+IK + G+ ++A+ +M S+T+
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 207 MVDGLAINGRVDDARELFDRMPVRNVVS----WNVMIKGYAKNRRLDEALELFERMPER- 261
++ L + D A M +RN+ +I G K+ + +ALEL+ + +
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 262 ---DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVI----TWTAMMTGYVQHGLSEEAL 314
D + N L+ G + G L+ A ++ E+ + + ++ +++G +EA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 315 KIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINM 374
+++ LKP+ T+ ++ ++ + E Q + Y S +I+
Sbjct: 561 MFLDEM-VKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 375 YSKCGELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQAN 432
K + FDE + + Q + + +N +I AY G A+ L M+ G N
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNII 492
TY L+ S VEE F++ ++ ++ HY L+D G+ G++ + ++
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEE-MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738
Query: 493 EGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAGTYSLLSNMYASVGKWK 552
+ NVH N KI TY+++ YA G
Sbjct: 739 REMHSK-------------NVHPN---------KI---------TYTVMIGGYARDGNVT 767
Query: 553 EAANVRMKMKDKGL 566
EA+ + +M++KG+
Sbjct: 768 EASRLLNEMREKGI 781
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 229/491 (46%), Gaps = 34/491 (6%)
Query: 107 DVVTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLF 162
DV +T +N + K ++EEA +LF +M E NV ++NT+IDG G+ ++A
Sbjct: 259 DVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFK 318
Query: 163 RRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAIN 214
+M ER +++++ ++K L+ RI DA + +M ++ +V + ++D
Sbjct: 319 EKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378
Query: 215 GRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPE----RDMPSW 266
G ++ A E+ D M + + ++N +IKGY KN + D A L + M + S+
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNVIT----WTAMMTGYVQHGLSEEALKIFNKLQA 322
+++ + + A + EM +N+ T +++G +HG +AL+++ +
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQF-L 497
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
+ +T T +L + L+E +I + I + LI+ +L
Sbjct: 498 NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLD 557
Query: 383 IARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
A DE + R + D +++ +I + +EAI ++ + G + TY ++
Sbjct: 558 EAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMI 617
Query: 441 TACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRLKEAFNIIEGL---GV 497
C A EEG ++FD+++ ++++Q Y L+ R+GRL A + E + G+
Sbjct: 618 DGCCKAERTEEGQEFFDEMM-SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 498 DLSLSVWGPLLAGCNVHGNADIGKLVAK--KILKIEPENAGTYSLLSNMYASVGKWKEAA 555
+ + + L+ G ++ + KL+ + ++ +EP N Y+ L + Y +G+ +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEP-NVFHYTALIDGYGKLGQMVKVE 735
Query: 556 NVRMKMKDKGL 566
+ +M K +
Sbjct: 736 CLLREMHSKNV 746
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 209/467 (44%), Gaps = 55/467 (11%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPERDLHL----WGTMINGYIMCGVIKEARKLFDGPDA 104
N I + G ++ A ++ D M + L L + T+I GY G A +L +
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Query: 105 MKDVV---TWTALVNGYVKLNQIEEAERLFYEMPERNVRS----WNTMIDGYARNGQTEK 157
+ V ++T+++ + A R EM RN+ T+I G ++G+ K
Sbjct: 429 IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSK 488
Query: 158 ALDLFRRMPERNVV----SWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVD 209
AL+L+ + + V + N ++ L E G++++A ++ R D S+ T++
Sbjct: 489 ALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS 548
Query: 210 GLAINGRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPER---- 261
G ++D+A D M R + +++++I G +++EA++ ++
Sbjct: 549 GCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP 608
Query: 262 DMPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIF 317
D+ +++ ++ G + ++ F EM KNV + + ++ Y + G AL++
Sbjct: 609 DVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELR 668
Query: 318 NKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSK 377
++ + PN+ T+ +++ S ++ + E + + + + + + + +ALI+ Y K
Sbjct: 669 EDMK-HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK 727
Query: 378 CGELHIARRIFDEGLLRQR-------DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQ 430
G++ + E LLR+ + I++ MI YA G EA L N+M+E G
Sbjct: 728 LGQM-----VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782
Query: 431 ANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD 477
+ +TY E + G V E + D E++YA +++
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFKGSD-----------EENYAAIIE 818
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 136/570 (23%), Positives = 255/570 (44%), Gaps = 100/570 (17%)
Query: 64 ARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFD---GPDAMKDVVTWTALVN 116
A L+ +M R DL ++ +++G G ++EA K F + + +VVT+TALV+
Sbjct: 313 ALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVD 372
Query: 117 GYVKLNQIEEAERLFYEMPER----NVRSWNTMIDGYARNGQTEKALDLFRRMPERNVV- 171
G K + AE + +M E+ NV ++++MI+GY + G E+A+ L R+M ++NVV
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVP 432
Query: 172 ---SWNTIIKALSECGRIEDAQWHFNQMRERDVKSWTTMVDGLAIN----GRVDDARELF 224
++ T+I L + G+ E A +MR V+ ++D L + GR+ + + L
Sbjct: 433 NGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLV 492
Query: 225 DRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPERDMP----SWNTLVTGFIQN 276
M + V +++ +I + K + AL E M ER MP S+N L++G ++
Sbjct: 493 KDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKF 552
Query: 277 GDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKL------------ 320
G + A+ + M +K ++ T+ MM + G SE LK+++K+
Sbjct: 553 GKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSC 611
Query: 321 --------------QADHALK--------PNTGTFVTVLGACSDLAGLNEGQQIHQLISK 358
+A H L PN T+ L S + + H+ +
Sbjct: 612 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLS 671
Query: 359 TAFQESTYVVSALINMYSKCGELHIARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKE 416
+ S V + LI K G A + + R D +++N ++ Y + ++
Sbjct: 672 YGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRK 731
Query: 417 AINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLV 476
A++ ++ M E G N TY ++ S AGL++E ++ + +K+R ++ + Y L+
Sbjct: 732 ALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSE-MKSRGMRPDDFTYNALI 790
Query: 477 DLCGRAGRLKEAFNIIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPENAG 536
+ G +K S++++ ++A LV K
Sbjct: 791 SGQAKIGNMKG------------SMTIYCEMIA----------DGLVPK---------TS 819
Query: 537 TYSLLSNMYASVGKWKEAANVRMKMKDKGL 566
TY++L + +A+VGK +A + +M +G+
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMGKRGV 849
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/444 (22%), Positives = 198/444 (44%), Gaps = 65/444 (14%)
Query: 75 DLHLWGTMINGYIMCGVIKEARKLFDGPDAMKDVVTWTALVNGYVKLNQIEEAERLFYEM 134
D+ +I+ + G + A L D VT+ +++G + +EA + EM
Sbjct: 128 DVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 187
Query: 135 PERNVR----SWNTMIDGYARNGQTEKALDLFRRMPERN--------------------- 169
+ + S+NT+IDG+ + G +A L + E N
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 247
Query: 170 -----------VVSWNTIIKALSECGRIEDAQWHFNQMRERDVK----SWTTMVDGLAIN 214
VV++++II L + G++ + +M E V ++TT+VD L
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 307
Query: 215 GRVDDARELFDRMPVRNV----VSWNVMIKGYAKNRRLDEALELFERMPER----DMPSW 266
A L+ +M VR + V + V++ G K L EA + F+ + E ++ ++
Sbjct: 308 NIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTY 367
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQK----NVITWTAMMTGYVQHGLSEEALKIFNKLQA 322
LV G + GDL+ AE + +M +K NV+T+++M+ GYV+ G+ EEA+ + K++
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME- 426
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
D + PN T+ TV+ ++ + + +E+ Y++ AL+N + G +
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486
Query: 383 IARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYVELL 440
+ + + + + D I++ +I + G + A+ +MQE G + V+Y L+
Sbjct: 487 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 546
Query: 441 TAC----------SHAGLVEEGLQ 454
+ ++ G+ E+G++
Sbjct: 547 SGMLKFGKVGADWAYKGMREKGIE 570
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 125/560 (22%), Positives = 262/560 (46%), Gaps = 57/560 (10%)
Query: 49 NTSISRLCQEGRIDDARKLFDRMPER----DLHLWGTMINGYIMCGVIKEARKLFDGPDA 104
NT IS LC+ G D+A + M + D + T+I+G+ G A+ L D
Sbjct: 165 NTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISE 224
Query: 105 MKDVVTWTALVNGYVKLNQIEEAER-LFYEMPERNVRSWNTMIDGYARNGQTEKALDLFR 163
+ +++T T L++ Y L+ IEEA R + + +V +++++I+ + G+ + L R
Sbjct: 225 L-NLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 164 RMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMRER----DVKSWTTMVDGLAING 215
M E +V V++ T++ +L + A ++QM R D+ +T ++DGL G
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAG 343
Query: 216 RVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSWN 267
+ +A + F + V NVV++ ++ G K L A + +M E+ ++ +++
Sbjct: 344 DLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYS 403
Query: 268 TLVTGFIQNGDLNRAEKLFHEMPQKNVI----TWTAMMTGYVQHGLSEEALKIFNKLQAD 323
+++ G+++ G L A L +M +NV+ T+ ++ G + G E A+++ +++
Sbjct: 404 SMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLI 463
Query: 324 HALKPNTGTFVTV-----LGACSDLAGLNEGQQIHQLISK-TAFQESTYVVSALINMYSK 377
+ N V +G ++ GL + ++SK + Y ++LI+++ K
Sbjct: 464 GVEENNYILDALVNHLKRIGRIKEVKGL-----VKDMVSKGVTLDQINY--TSLIDVFFK 516
Query: 378 CGELHIARRIFDEGLLRQR----DLISWNGMIAAYAHHGYGKEAIN-LFNKMQELGFQAN 432
G+ A +++R D++S+N +I+ +GK + + M+E G + +
Sbjct: 517 GGDEEAALA--WAEEMQERGMPWDVVSYNVLISGMLK--FGKVGADWAYKGMREKGIEPD 572
Query: 433 DVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYAC--LVDLCGRAGRLKEAFN 490
T+ ++ + G E L+ +DK+ +S ++ +C +V + G+++EA +
Sbjct: 573 IATFNIMMNSQRKQGDSEGILKLWDKM---KSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 491 IIEG---LGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPE-NAGTYSLLSNMYA 546
I+ + + +L+ + L + H AD + +L + + Y+ L
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689
Query: 547 SVGKWKEAANVRMKMKDKGL 566
+G K+AA V M+ +G
Sbjct: 690 KLGMTKKAAMVMGDMEARGF 709
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 177/423 (41%), Gaps = 85/423 (20%)
Query: 153 GQTEKALDLFRRMPERNVVSWNTIIKALSECGRIED-AQWHFNQM----RERDVKSWTTM 207
+T A+ F +P+ + WN++I + G + D +++M DV + +
Sbjct: 78 ARTLSAMCTFGVVPDSRL--WNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVL 135
Query: 208 VDGLAINGRVDDARELF-DRMPVRNVVSWNVMIKGYAKNRRLDEALELFERMPER----D 262
+ GR+ A L +R+ + V++N +I G ++ DEA + M + D
Sbjct: 136 IHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPD 195
Query: 263 MPSWNTLVTGFIQNGDLNRAEKLFHEMPQKNVITWTAMMTGYVQHGLSEEALK------- 315
S+NTL+ GF + G+ RA+ L E+ + N+IT T +++ Y EEA +
Sbjct: 196 TVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGF 255
Query: 316 ---------IFNKL---------------QADHALKPNTGTFVTVL-------------- 337
I N+L + ++ PN T+ T++
Sbjct: 256 DPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALA 315
Query: 338 --------GACSDL------------AG-LNEGQQIHQLISKTAFQESTYVVSALINMYS 376
G DL AG L E ++ +++ + + +AL++
Sbjct: 316 LYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLC 375
Query: 377 KCGELHIARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
K G+L A I + L + ++++++ MI Y G +EA++L KM++ N
Sbjct: 376 KAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGF 435
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA--CLVDLCGRAGRLKEAFNII 492
TY ++ AG E ++ ++ R I V E++Y LV+ R GR+KE ++
Sbjct: 436 TYGTVIDGLFKAGKEEMAIELSKEM---RLIGVEENNYILDALVNHLKRIGRIKEVKGLV 492
Query: 493 EGL 495
+ +
Sbjct: 493 KDM 495
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 123/265 (46%), Gaps = 27/265 (10%)
Query: 38 TSSLHSAMKDCNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYI-MCGVIKEAR 96
+ + ++ CN + LC+ G++++A + ++M ++H T ++ K A
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 660
Query: 97 KLFDGPDAMKDV------VTWTALVNGYVKLNQIEEAERLFYEMPER----NVRSWNTMI 146
+F + + + L+ KL ++A + +M R + ++N+++
Sbjct: 661 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM 720
Query: 147 DGYARNGQTEKALDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDVK 202
GY KAL + M E NV ++NTII+ LS+ G I++ ++M+ R ++
Sbjct: 721 HGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMR 780
Query: 203 ----SWTTMVDGLAINGRVDDARELFDRMPVRNVV----SWNVMIKGYAKNRRLDEALEL 254
++ ++ G A G + + ++ M +V ++NV+I +A ++ +A EL
Sbjct: 781 PDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQAREL 840
Query: 255 FERMPER----DMPSWNTLVTGFIQ 275
+ M +R + ++ T+++G +
Sbjct: 841 LKEMGKRGVSPNTSTYCTMISGLCK 865
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/418 (22%), Positives = 194/418 (46%), Gaps = 60/418 (14%)
Query: 48 CNTSISRLCQEGRIDDARKLFDRMPERDLHLWGTMINGYIMCGVIKEARKLFDGPDAMKD 107
CNT +S LC++G+ D+A +L +M R + GP +
Sbjct: 446 CNTILSWLCKQGKTDEATELLSKMESRGI------------------------GP----N 477
Query: 108 VVTWTALVNGYVKLNQIEEAERLFYEMPERNVR----SWNTMIDGYARNGQTEKALDLFR 163
VV++ ++ G+ + ++ A +F + E+ ++ +++ +IDG RN + AL++
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 164 RMPERNV----VSWNTIIKALSECGRIEDAQWHFNQMRER-----DVKSWTTMVDGLAIN 214
M N+ V + TII L + G+ A+ M E S+ +++DG
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 215 GRVDDARELFDRMP----VRNVVSWNVMIKGYAKNRRLDEALELFERMPER----DMPSW 266
G +D A ++ M NV+++ ++ G KN R+D+ALE+ + M + D+P++
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAY 657
Query: 267 NTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNKLQA 322
L+ GF + ++ A LF E+ ++ + + ++++G+ G AL ++ K+
Sbjct: 658 GALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLK 717
Query: 323 DHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCGELH 382
D L+ + GT+ T++ L +++ + + + ++N SK G+
Sbjct: 718 D-GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFV 776
Query: 383 IARRIFDEGLLRQR----DLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTY 436
++F+E +++ +++ +N +IA + G EA L ++M + G + T+
Sbjct: 777 KVVKMFEE--MKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 116/560 (20%), Positives = 251/560 (44%), Gaps = 52/560 (9%)
Query: 51 SISRLCQEGRIDDARKLFDRMPERDL-----HLWGTMINGYIMCGVIKEARKLFDG--PD 103
++ C+ + A L M E+ L + ++I + G + +A +L D D
Sbjct: 274 AVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSD 333
Query: 104 AMK-DVVTWTALVNGYVKLNQIEEAERLFYEM----PERNVRSWNTMIDGYARNGQTEKA 158
+ +VV T+L+ G+ K N + A LF +M P N +++ +I+ + +NG+ EKA
Sbjct: 334 GISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKA 393
Query: 159 LDLFRRMP----ERNVVSWNTIIKALSECGRIEDAQWHFNQMRER---DVKSWTTMVDGL 211
L+ +++M +V +TII+ + + E+A F++ E +V T++ L
Sbjct: 394 LEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWL 453
Query: 212 AINGRVDDARELFDRMPVR----NVVSWNVMIKGYAKNRRLDEALELFERMPERDMP--- 264
G+ D+A EL +M R NVVS+N ++ G+ + + +D A +F + E+ +
Sbjct: 454 CKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNN 513
Query: 265 -SWNTLVTGFIQNGDLNRAEKLFHEMPQKNV----ITWTAMMTGYVQHGLSEEALKIFNK 319
+++ L+ G +N D A ++ + M N+ + + ++ G + G + +A ++
Sbjct: 514 YTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN 573
Query: 320 LQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYSKCG 379
+ + L + ++ +++ ++ ++ + + ++L+N K
Sbjct: 574 MIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNN 633
Query: 380 ELHIARRIFDEGLLR--QRDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDVTYV 437
+ A + DE + + D+ ++ +I + + A LF+++ E G + Y
Sbjct: 634 RMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYN 693
Query: 438 ELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVDLCGRAGRL---KEAFNIIEG 494
L++ + G + L + K+LK+ ++ Y L+D + G L E + ++
Sbjct: 694 SLISGFRNLGNMVAALDLYKKMLKD-GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQA 752
Query: 495 LGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILKIEPE--------NAGTYSLLSNMYA 546
+G+ V ++ V+G + G+ V K++K+ E N Y+ + +
Sbjct: 753 VGL-----VPDEIIYTVIVNGLSKKGQFV--KVVKMFEEMKKNNVTPNVLIYNAVIAGHY 805
Query: 547 SVGKWKEAANVRMKMKDKGL 566
G EA + +M DKG+
Sbjct: 806 REGNLDEAFRLHDEMLDKGI 825
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 217/499 (43%), Gaps = 78/499 (15%)
Query: 107 DVVTWTALVN----GYVKLNQIEEAERLFYEMPERNVRSWNT----MIDGYARNGQTEKA 158
DV+ + VN V+ N + EA+ L+ M V N ++ R + +A
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEA 252
Query: 159 LDLFRRMPER----NVVSWNTIIKALSECGRIEDAQWHFNQMRERDV-----KSWTTMVD 209
L++ R ER + + ++ ++A + + A +M+E+ + +++T+++
Sbjct: 253 LEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVIL 312
Query: 210 GLAINGRVDDARELFDRM----PVRNVVSWNVMIKGYAKNRRLDEALELFERMPERDMPS 265
G +DDA L D M NVV+ +I G+ KN L AL LF++M E++ PS
Sbjct: 313 ASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKM-EKEGPS 371
Query: 266 WNT-----LVTGFIQNGDLNRAEKLFHEMP----QKNVITWTAMMTGYVQHGLSEEALKI 316
N+ L+ F +NG++ +A + + +M +V ++ G+++ EEALK+
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431
Query: 317 FNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQLISKTAFQESTYVVSALINMYS 376
F++ +F T L + +V + +++
Sbjct: 432 FDE------------SFETGLA-------------------------NVFVCNTILSWLC 454
Query: 377 KCGELHIARRIFDEGLLRQ--RDLISWNGMIAAYAHHGYGKEAINLFNKMQELGFQANDV 434
K G+ A + + R +++S+N ++ + A +F+ + E G + N+
Sbjct: 455 KQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 435 TYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYACLVD-LC--GRAGRLKEAF-N 490
TY L+ C + L+ + + + +I+V Y +++ LC G+ + +E N
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHM-TSSNIEVNGVVYQTIINGLCKVGQTSKARELLAN 573
Query: 491 IIEGLGVDLSLSVWGPLLAGCNVHGNADIGKLVAKKILK--IEPENAGTYSLLSNMYASV 548
+IE + +S + ++ G G D +++ I P N TY+ L N
Sbjct: 574 MIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISP-NVITYTSLMNGLCKN 632
Query: 549 GKWKEAANVRMKMKDKGLK 567
+ +A +R +MK+KG+K
Sbjct: 633 NRMDQALEMRDEMKNKGVK 651
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/418 (19%), Positives = 191/418 (45%), Gaps = 28/418 (6%)
Query: 136 ERNVRSWNTMIDGYARNGQTEKALDLFRRMPERNVVSW----NTIIKALSECGRIEDAQW 191
E N R++N +++ Y+++ QT+ A+D+ +M E +V+ + N + AL + + +A+
Sbjct: 160 EVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKE 219
Query: 192 HFNQM----RERDVKSWTTMVDGLAINGRVDDARELFDRMPVR----NVVSWNVMIKGYA 243
+++M + D + ++ + +A E+ R R + + +++ ++
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 244 KNRRLDEALELFERMPERDM--PS---WNTLVTGFIQNGDLNRAEKLFHEMPQK----NV 294
K L A L M E+ + PS + +++ ++ G+++ A +L EM NV
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNV 339
Query: 295 ITWTAMMTGYVQHGLSEEALKIFNKLQADHALKPNTGTFVTVLGACSDLAGLNEGQQIHQ 354
+ T+++TG+ ++ AL +F+K++ + PN+ TF ++ + + + ++
Sbjct: 340 VAATSLITGHCKNNDLVSALVLFDKMEKEGP-SPNSVTFSVLIEWFRKNGEMEKALEFYK 398
Query: 355 LISKTAFQESTYVVSALINMYSKCGELHIARRIFDEGL-LRQRDLISWNGMIAAYAHHGY 413
+ S + V +I + K + A ++FDE ++ N +++ G
Sbjct: 399 KMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGK 458
Query: 414 GKEAINLFNKMQELGFQANDVTYVELLTACSHAGLVEEGLQYFDKLLKNRSIQVREDHYA 473
EA L +KM+ G N V+Y ++ ++ F +L+ + ++ Y+
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILE-KGLKPNNYTYS 517
Query: 474 CLVDLCGRAGRLKEAFNIIEGL---GVDLSLSVWGPLLAG-CNVHGNADIGKLVAKKI 527
L+D C R + A ++ + ++++ V+ ++ G C V + +L+A I
Sbjct: 518 ILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575