Miyakogusa Predicted Gene

Lj0g3v0258079.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0258079.1 Non Chatacterized Hit- tr|K4CQZ2|K4CQZ2_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,57.32,6e-19,seg,NULL; PROTEASE U48 CAAX PRENYL PROTEASE
RCE1,NULL,CUFF.16968.1
         (118 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G36305.1 | Symbols: RCE1, ATFACE-2, ATFACE2, FACE2 | farnesyl...    95   8e-21

>AT2G36305.1 | Symbols: RCE1, ATFACE-2, ATFACE2, FACE2 |
           farnesylated protein-converting enzyme 2 |
           chr2:15214607-15216449 FORWARD LENGTH=311
          Length = 311

 Score = 95.1 bits (235), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 48/83 (57%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 28  VSKPVAVSACVAMALLYVASLYAPTVLFRLPPPSSLNSFMIRRFLCAAVSTVLSLFLSAL 87
           +S  +AV+ CVAMAL YV  LY PTV+ RLP  SS   FMIRRF+CAA+ TV SL  +A 
Sbjct: 8   ISMSLAVATCVAMALFYVLILYVPTVILRLPSASSYTEFMIRRFICAAICTVASLVFTAF 67

Query: 88  ILPV-TKELPYIFGAYGIRGDHI 109
           ILP+ + E  YI G YGIR DH+
Sbjct: 68  ILPIKSWEASYILGVYGIRKDHL 90