Miyakogusa Predicted Gene

Lj0g3v0257769.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0257769.2 Non Chatacterized Hit- tr|I3S057|I3S057_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,99.55,0,seg,NULL;
NAC,Nascent polypeptide-associated complex NAC;
UBA,Ubiquitin-associated/translation elong,CUFF.16952.2
         (220 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G49470.1 | Symbols: NACA2 | nascent polypeptide-associated co...   167   4e-42
AT4G10480.1 | Symbols:  | Nascent polypeptide-associated complex...   155   1e-38
AT4G10480.2 | Symbols:  | Nascent polypeptide-associated complex...   155   3e-38
AT5G13850.1 | Symbols: NACA3 | nascent polypeptide-associated co...   148   2e-36
AT3G12390.1 | Symbols:  | Nascent polypeptide-associated complex...   146   1e-35
AT1G33040.1 | Symbols: NACA5 | nascent polypeptide-associated co...   142   1e-34

>AT3G49470.1 | Symbols: NACA2 | nascent polypeptide-associated
           complex subunit alpha-like protein 2 |
           chr3:18341072-18342273 FORWARD LENGTH=217
          Length = 217

 Score =  167 bits (424), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 89/159 (55%), Positives = 98/159 (61%), Gaps = 1/159 (0%)

Query: 62  AQGTTEGXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSET 121
           AQG +              AMLKLG+KPVTGVSRVTIKRTKN+LFFISKPDVFKSP+SET
Sbjct: 60  AQGVSGSSKQSRSEKKSRKAMLKLGMKPVTGVSRVTIKRTKNVLFFISKPDVFKSPHSET 119

Query: 122 YVIFGEAKIEDXXXXXXXXXXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 181
           YVIFGEAKIED            FRMP++ +                             
Sbjct: 120 YVIFGEAKIEDLSSQLQTQAAQQFRMPEIGATSQRAEASTATVEAQVEEDEEEIDETGVE 179

Query: 182 XPHDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 220
              DIDLVMTQAGVSRSKAVKALK+H+GDIV AIMELTT
Sbjct: 180 A-RDIDLVMTQAGVSRSKAVKALKSHDGDIVSAIMELTT 217


>AT4G10480.1 | Symbols:  | Nascent polypeptide-associated complex
           (NAC), alpha subunit family protein |
           chr4:6478089-6479079 REVERSE LENGTH=212
          Length = 212

 Score =  155 bits (393), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/157 (54%), Positives = 92/157 (58%), Gaps = 1/157 (0%)

Query: 64  GTTEGXXXXXXXXXXXXAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYV 123
           G  E             AMLKLG+KPVT VSRVTIKR+KN+LF ISKPDVFKSPNSETYV
Sbjct: 57  GENEASKQSRSEKKSRKAMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYV 116

Query: 124 IFGEAKIEDXXXXXXXXXXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP 183
           IFGEAKI+D            F+MPD+AS                               
Sbjct: 117 IFGEAKIDDMSSQLQAQAAQRFKMPDVASMIPNTDGSEAATVAQEEEDDEDVDETGVEA- 175

Query: 184 HDIDLVMTQAGVSRSKAVKALKTHNGDIVGAIMELTT 220
            DIDLVMTQAGVSR KAVKALK  NGDIV AIMELTT
Sbjct: 176 KDIDLVMTQAGVSRPKAVKALKESNGDIVSAIMELTT 212


>AT4G10480.2 | Symbols:  | Nascent polypeptide-associated complex
           (NAC), alpha subunit family protein |
           chr4:6478089-6479079 REVERSE LENGTH=211
          Length = 211

 Score =  155 bits (391), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/140 (60%), Positives = 90/140 (64%), Gaps = 1/140 (0%)

Query: 81  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXX 140
           AMLKLG+KPVT VSRVTIKR+KN+LF ISKPDVFKSPNSETYVIFGEAKI+D        
Sbjct: 73  AMLKLGMKPVTDVSRVTIKRSKNVLFVISKPDVFKSPNSETYVIFGEAKIDDMSSQLQAQ 132

Query: 141 XXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKA 200
               F+MPD+AS                                DIDLVMTQAGVSR KA
Sbjct: 133 AAQRFKMPDVASMIPNTDGSEAATVAQEEEDDEDVDETGVEA-KDIDLVMTQAGVSRPKA 191

Query: 201 VKALKTHNGDIVGAIMELTT 220
           VKALK  NGDIV AIMELTT
Sbjct: 192 VKALKESNGDIVSAIMELTT 211


>AT5G13850.1 | Symbols: NACA3 | nascent polypeptide-associated
           complex subunit alpha-like protein 3 |
           chr5:4471361-4472676 FORWARD LENGTH=204
          Length = 204

 Score =  148 bits (374), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/140 (54%), Positives = 90/140 (64%)

Query: 81  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXX 140
           AMLKLG+KP+TGVSRVT+K++KNILF ISKPDVFKSP S+TYVIFGEAKIED        
Sbjct: 65  AMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQLQSQ 124

Query: 141 XXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKA 200
               F+ P++++                              P DI+LVMTQAGVS+ +A
Sbjct: 125 AAEQFKAPNLSNVISQGETSSAATAAAVQDDDDEEVDEEGVEPKDIELVMTQAGVSKPRA 184

Query: 201 VKALKTHNGDIVGAIMELTT 220
           VKALK  NGDIV AIMELTT
Sbjct: 185 VKALKLANGDIVSAIMELTT 204


>AT3G12390.1 | Symbols:  | Nascent polypeptide-associated complex
           (NAC), alpha subunit family protein |
           chr3:3942344-3943595 FORWARD LENGTH=203
          Length = 203

 Score =  146 bits (368), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 77/140 (55%), Positives = 89/140 (63%), Gaps = 5/140 (3%)

Query: 81  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXX 140
           AMLKLG+KP+TGVSRVT+K++KNILF ISKPDVFKSP S+TYVIFGEAKIED        
Sbjct: 69  AMLKLGMKPITGVSRVTVKKSKNILFVISKPDVFKSPASDTYVIFGEAKIEDLSSQIQSQ 128

Query: 141 XXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKA 200
               F+ PD+++                              P DI+LVMTQAGVSR  A
Sbjct: 129 AAEQFKAPDLSN-----VISKGESSSAAVVQDDEEVDEEGVEPKDIELVMTQAGVSRPNA 183

Query: 201 VKALKTHNGDIVGAIMELTT 220
           VKALK  +GDIV AIMELTT
Sbjct: 184 VKALKAADGDIVSAIMELTT 203


>AT1G33040.1 | Symbols: NACA5 | nascent polypeptide-associated
           complex subunit alpha-like protein 5 |
           chr1:11966547-11967696 FORWARD LENGTH=209
          Length = 209

 Score =  142 bits (359), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 75/140 (53%), Positives = 89/140 (63%), Gaps = 1/140 (0%)

Query: 81  AMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDXXXXXXXX 140
           A+LKLG+KPV+ VSRVTIKR KN+LF ISKPDV+KSPN+ETYVIFGEAK++D        
Sbjct: 71  AVLKLGMKPVSDVSRVTIKRAKNVLFVISKPDVYKSPNAETYVIFGEAKVDDLSSQLQTQ 130

Query: 141 XXXXFRMPDMASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPHDIDLVMTQAGVSRSKA 200
               F+MPD+ S                                DIDLVMTQAGVS++KA
Sbjct: 131 AAQRFKMPDVTSMLPNAGSEATMAPLAEEEDEDDVDDTGVEA-RDIDLVMTQAGVSKAKA 189

Query: 201 VKALKTHNGDIVGAIMELTT 220
           V ALK ++GDIV AIMELTT
Sbjct: 190 VSALKANDGDIVSAIMELTT 209