Miyakogusa Predicted Gene

Lj0g3v0256879.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0256879.1 Non Chatacterized Hit- tr|A9PFY2|A9PFY2_POPTR
Putative uncharacterized protein OS=Populus
trichocarp,40.99,8e-17,coiled-coil,NULL; seg,NULL,CUFF.16955.1
         (363 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G38040.2 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase car...   216   3e-56
AT2G38040.1 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase car...   216   3e-56

>AT2G38040.2 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase
           carboxyltransferase alpha subunit |
           chr2:15917612-15920749 FORWARD LENGTH=769
          Length = 769

 Score =  216 bits (549), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 205/331 (61%), Gaps = 9/331 (2%)

Query: 1   MLKFRKIGGFQEGIPVDPKRKVNMKKKDVPVAVKIPDAELEVEVEKLKQQILNANESSSK 60
           M K+RKIG F EG P++P RK+NMKK++   AV     +L+ EV+KLK+QIL A E+S++
Sbjct: 399 MAKYRKIGVFIEGEPIEPSRKINMKKRE---AVFSDSRKLQGEVDKLKEQILKAKETSTE 455

Query: 61  --PPKLDLDEMIMKLEREVDQEYSEAVKALGLTDRFSKLQEEVSAANSDNQLSDPLLKDK 118
             P    L+EMI KL+ E+D EY+EA  A+GL +R + ++EE S A+S+  L  P+L +K
Sbjct: 456 AEPSSEVLNEMIEKLKSEIDDEYTEAAIAVGLEERLTAMREEFSKASSEEHLMHPVLIEK 515

Query: 119 IEKLKVEFEQGLSAAPNHGRLQNKLDMLKELSKVKHLSETKKQKQEVRKKFVEVISNPRI 178
           IEKLK EF   L+ APN+  L++KL+ML++ S+ K  SE    K+E+ K+F E +  P I
Sbjct: 516 IEKLKEEFNTRLTDAPNYESLKSKLNMLRDFSRAKAASEATSLKKEINKRFQEAVDRPEI 575

Query: 179 KENYEALTAEIQRVGASSSSDLDDELKNKIIEFNKEVDSQLVNALKSVGLDVQLVKAEGR 238
           +E  EA+ AE+   GASS  +L D LK K+++   EV++++   LKS+GL++  VK   +
Sbjct: 576 REKVEAIKAEVASSGASSFDELPDALKEKVLKTKGEVEAEMAGVLKSMGLELDAVKQNQK 635

Query: 239 DSKESEVS---EYVPXXXXXXXXXXXXXXXXXXXXDVKSKIEQLKLEVAKAGETPD-PES 294
           D+ E   +                           ++KS +E LK+E AKA +TP   E+
Sbjct: 636 DTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKASKTPGVTEA 695

Query: 295 KKRITSLMQQIKQGLVEAIDSSSIKEKYDNL 325
            ++I +L QQIKQ + EA+++S ++EK D L
Sbjct: 696 YQKIEALEQQIKQKIAEALNTSGLQEKQDEL 726


>AT2G38040.1 | Symbols: CAC3 | acetyl Co-enzyme a carboxylase
           carboxyltransferase alpha subunit |
           chr2:15917612-15920749 FORWARD LENGTH=769
          Length = 769

 Score =  216 bits (549), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 205/331 (61%), Gaps = 9/331 (2%)

Query: 1   MLKFRKIGGFQEGIPVDPKRKVNMKKKDVPVAVKIPDAELEVEVEKLKQQILNANESSSK 60
           M K+RKIG F EG P++P RK+NMKK++   AV     +L+ EV+KLK+QIL A E+S++
Sbjct: 399 MAKYRKIGVFIEGEPIEPSRKINMKKRE---AVFSDSRKLQGEVDKLKEQILKAKETSTE 455

Query: 61  --PPKLDLDEMIMKLEREVDQEYSEAVKALGLTDRFSKLQEEVSAANSDNQLSDPLLKDK 118
             P    L+EMI KL+ E+D EY+EA  A+GL +R + ++EE S A+S+  L  P+L +K
Sbjct: 456 AEPSSEVLNEMIEKLKSEIDDEYTEAAIAVGLEERLTAMREEFSKASSEEHLMHPVLIEK 515

Query: 119 IEKLKVEFEQGLSAAPNHGRLQNKLDMLKELSKVKHLSETKKQKQEVRKKFVEVISNPRI 178
           IEKLK EF   L+ APN+  L++KL+ML++ S+ K  SE    K+E+ K+F E +  P I
Sbjct: 516 IEKLKEEFNTRLTDAPNYESLKSKLNMLRDFSRAKAASEATSLKKEINKRFQEAVDRPEI 575

Query: 179 KENYEALTAEIQRVGASSSSDLDDELKNKIIEFNKEVDSQLVNALKSVGLDVQLVKAEGR 238
           +E  EA+ AE+   GASS  +L D LK K+++   EV++++   LKS+GL++  VK   +
Sbjct: 576 REKVEAIKAEVASSGASSFDELPDALKEKVLKTKGEVEAEMAGVLKSMGLELDAVKQNQK 635

Query: 239 DSKESEVS---EYVPXXXXXXXXXXXXXXXXXXXXDVKSKIEQLKLEVAKAGETPD-PES 294
           D+ E   +                           ++KS +E LK+E AKA +TP   E+
Sbjct: 636 DTAEQIYAANENLQEKLEKLNQEITSKIEEVVRTPEIKSMVELLKVETAKASKTPGVTEA 695

Query: 295 KKRITSLMQQIKQGLVEAIDSSSIKEKYDNL 325
            ++I +L QQIKQ + EA+++S ++EK D L
Sbjct: 696 YQKIEALEQQIKQKIAEALNTSGLQEKQDEL 726