Miyakogusa Predicted Gene

Lj0g3v0256609.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0256609.1 tr|G7IQQ5|G7IQQ5_MEDTR Beta-hexosaminidase
subunit beta OS=Medicago truncatula GN=MTR_2g062560 PE=4
,78.16,0,GLHYDRLASE20,Beta-hexosaminidase subunit alpha/beta;
Glyco_hydro_20,Glycoside hydrolase family 20, c,CUFF.16860.1
         (590 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G05590.1 | Symbols: HEXO2, ATHEX3 | beta-hexosaminidase 2 | c...   727   0.0  
AT3G55260.1 | Symbols: HEXO1, ATHEX2 | beta-hexosaminidase 1 | c...   230   2e-60
AT1G65590.1 | Symbols: HEXO3, ATHEX1 | beta-hexosaminidase 3 | c...   218   9e-57

>AT1G05590.1 | Symbols: HEXO2, ATHEX3 | beta-hexosaminidase 2 |
           chr1:1669871-1671686 FORWARD LENGTH=580
          Length = 580

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/558 (63%), Positives = 429/558 (76%), Gaps = 17/558 (3%)

Query: 39  STTTTINVWPKPRNLTWAPPHQATLLSPTFTITVATPHRNHHLSAAVTRYTNLIKTEHHR 98
           S    IN+WPKPR L+W P H+A  LSP FTI +A  H+  +LSA+VTRY NLI++E++ 
Sbjct: 26  SIALPINIWPKPRFLSW-PQHKAIALSPNFTI-LAPEHQ--YLSASVTRYHNLIRSENYS 81

Query: 99  PLVPIAANLSSNIPPLQSLTITVTYPDTPLQHGVDESYTLTV--NAPVATLTAATAWGAM 156
           PL+     L      L++L +TVT    PL HGVDESY L++   +  A L A +AWGAM
Sbjct: 82  PLISYPVKLMKRYT-LRNLVVTVTDFSLPLHHGVDESYKLSIPIGSFSAHLLAHSAWGAM 140

Query: 157 RGLETLSQITWGDPTRVA--VGVRVWDAPLYGHRGVMLDTSRNYFPVKDVMRLVEAMGMN 214
           RGLET SQ+ WG    +   VG+ + D+PL+GHRGV+LDTSRNY+ V D+MR ++AM  N
Sbjct: 141 RGLETFSQMIWGTSPDLCLPVGIYIQDSPLFGHRGVLLDTSRNYYGVDDIMRTIKAMSAN 200

Query: 215 KVNVLHWHVTDSQSFPLVVHSEPGLAENGAYGPDMVYTPADVKAVVEFGMDRGVRVMPEI 274
           K+NV HWH+TDSQSFPLV+ SEP LA  G+ GPDMVYTP DV  +V++G + GVRV+PEI
Sbjct: 201 KLNVFHWHITDSQSFPLVLPSEPSLAAKGSLGPDMVYTPEDVSKIVQYGFEHGVRVLPEI 260

Query: 275 DSPGHTGSWALSYPEIVTCANMFWLPAEG---EPLAAEPGTGHLNPLIPKTYQVLNNVIH 331
           D+PGHTGSW  +YPEIVTCANMFW PA     E LA+EPGTG LNPL PKTY+V+ NVI 
Sbjct: 261 DTPGHTGSWGEAYPEIVTCANMFWWPAGKSWEERLASEPGTGQLNPLSPKTYEVVKNVIQ 320

Query: 332 DVTTLFPETFYHAGADEVIPGCWKADPTIQKYLSNGGTLNQILEVFINNTLPFILSLNRT 391
           D+   FPE+F+H G DEVIPGCWK DP I  +LS+GGTL+Q+LE +IN+TLP+I+S NRT
Sbjct: 321 DIVNQFPESFFHGGGDEVIPGCWKTDPAINSFLSSGGTLSQLLEKYINSTLPYIVSQNRT 380

Query: 392 VVYWEDVLLSDTVHVPSTILPKEHVIPKTWNNGHDNTKQIVSSGYRAIVSSAAFYYLDCG 451
           VVYWEDVLL   +    ++LPKEH I +TWNNG +NTK+IV++GYR IVSS+ FYYLDCG
Sbjct: 381 VVYWEDVLLDAQIKADPSVLPKEHTILQTWNNGPENTKRIVAAGYRVIVSSSEFYYLDCG 440

Query: 452 HGDFTGNNSAYDNQTGIDTGNGGSWCGPFKTWQTMYNYDIAYG-LSEDEAKLVLGGEVAL 510
           HG F GN+S YD +       GGSWC PFKTWQ++YNYDIA G L+E+E KLVLGGEVAL
Sbjct: 441 HGGFLGNDSIYDQK----ESGGGSWCAPFKTWQSIYNYDIADGLLNEEERKLVLGGEVAL 496

Query: 511 WSEQADSTVLDSRIWPRASAMGEALWSGNRDEKGVKRYGEATDRLNEWRSRMVARGIGAE 570
           WSEQADSTVLDSR+WPRASA+ E+LWSGNRDE+GVKR GEA DRLN WR RMV RGIGAE
Sbjct: 497 WSEQADSTVLDSRLWPRASALAESLWSGNRDERGVKRCGEAVDRLNLWRYRMVKRGIGAE 556

Query: 571 PIQPLWCVKNPGMCNTAQ 588
           PIQPLWC+KNPGMCNT  
Sbjct: 557 PIQPLWCLKNPGMCNTVH 574


>AT3G55260.1 | Symbols: HEXO1, ATHEX2 | beta-hexosaminidase 1 |
           chr3:20489317-20492858 FORWARD LENGTH=541
          Length = 541

 Score =  230 bits (587), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 171/563 (30%), Positives = 259/563 (46%), Gaps = 81/563 (14%)

Query: 46  VWPKPRNLTWAPPHQATLLSPTFTITVA-TPHRNHHLSAAVTRYTNLI--KTEHHRPLVP 102
           +WP P   ++   ++   + PT T+ VA     +  + AA  RY  +I         L+ 
Sbjct: 33  LWPLPAEFSFG--NETLSVDPTVTLIVAGNGGGSLIIRAAFDRYMGIIFKHASGRGSLLS 90

Query: 103 IAANLSSNIPPLQSLTITVTYPDTPLQHGVDESYTLTVNAP-------VATLTAATAWGA 155
               L      + SL I V      LQ GVDESYTL V+          AT+ A T +GA
Sbjct: 91  RIRFLKMVEYDITSLKIVVHSDSEELQLGVDESYTLMVSKKNEQSIVGAATIEANTVYGA 150

Query: 156 MRGLETLSQITWGDPTRVAVGVR-----VWDAPLYGHRGVMLDTSRNYFPVKDVMRLVEA 210
           +RGLET SQ+   D    +V +      + D P +G+RG+++DTSR+Y P+  + +++E+
Sbjct: 151 LRGLETFSQLCAFDYITKSVQIYKAPWYIQDKPRFGYRGLLIDTSRHYLPIDVIKQIIES 210

Query: 211 MGMNKVNVLHWHVTDSQSFPLVVHSEPGLAENGAYGPDMVYTPADVKAVVEFGMDRGVRV 270
           M   K+NVLHWH+ D QSFPL   + P L + GAY     YT  D   +V F   RG+ V
Sbjct: 211 MSFAKLNVLHWHIVDEQSFPLETPTYPNLWK-GAYSRWERYTVEDASEIVRFAKMRGINV 269

Query: 271 MPEIDSPGHTGSWALSYPEI---VTCANMFWLPAEGEPLAAEPGTGHLNPLIPKTYQVLN 327
           M E+D PGH  SW   YP++   ++C          EPL               T+ V++
Sbjct: 270 MAEVDVPGHAESWGTGYPDLWPSLSCR---------EPLDVTKNF---------TFDVIS 311

Query: 328 NVIHDVTTLFPETFYHAGADEVIPGCWKADPTIQKYLSNGG-TLNQILEVFINNTLPFIL 386
            ++ D+  +FP   +H G DEV   CWK    ++++L     T     + F+       +
Sbjct: 312 GILADMRKIFPFELFHLGGDEVNTDCWKNTTHVKEWLQGRNFTTKDAYKYFVLRAQQIAI 371

Query: 387 SLNRTVVYWEDVLLSDTVHV-PSTILPKEHVIPKTWNNGHDNTKQIVSSGYRAIVSSAAF 445
           S N T V WE+   S    + P T++    V         D  ++ V+ G+R I S+  +
Sbjct: 372 SKNWTPVNWEETFSSFGKDLDPRTVIQNWLV--------SDICQKAVAKGFRCIFSNQGY 423

Query: 446 YYLDCGHGDFTGNNSAYDNQTGIDTGNGGSWCGPFKTWQTMYNYDIAYGLSEDE-AKLVL 504
           +YLD  H D                            W+ +YN +   G+ +    KLV+
Sbjct: 424 WYLD--HLDV--------------------------PWEEVYNTEPLNGIEDPSLQKLVI 455

Query: 505 GGEVALWSEQADSTVLDSRIWPRASAMGEALWSGNRDEKGVKRYGEATDRLNEWRSRMVA 564
           GGEV +W E AD++V+   IWPRA+A  E +WS             A  RL+ +R  +  
Sbjct: 456 GGEVCMWGETADTSVVLQTIWPRAAAAAERMWSTREAVSKGNITLTALPRLHYFRCLLNN 515

Query: 565 RGIGAEPIQPLWCVK---NPGMC 584
           RG+ A P+   +  +    PG C
Sbjct: 516 RGVPAAPVDNFYARRPPLGPGSC 538


>AT1G65590.1 | Symbols: HEXO3, ATHEX1 | beta-hexosaminidase 3 |
           chr1:24385996-24390989 FORWARD LENGTH=535
          Length = 535

 Score =  218 bits (555), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 225/470 (47%), Gaps = 64/470 (13%)

Query: 114 LQSLTITVTYPDTPLQHGVDESYTLTVNAP----VATLTAATAWGAMRGLETLSQITWGD 169
           LQ L + ++     L++G DESY L V +P     A L A + +GA+ GL+T SQ+   +
Sbjct: 102 LQGLHVIISSSTDELEYGADESYKLVVPSPEKPSYAQLEAKSVYGALHGLQTFSQLCHFN 161

Query: 170 PTRVAVGV-----RVWDAPLYGHRGVMLDTSRNYFPVKDVMRLVEAMGMNKVNVLHWHVT 224
             +  + +      + D P + +RG+++DTSR+Y P+  +  ++++M   K+NVLHWH+ 
Sbjct: 162 LKKKVIEILMTPWNIIDQPRFSYRGLLIDTSRHYLPLPVIKNVIDSMTYAKLNVLHWHIV 221

Query: 225 DSQSFPLVVHSEPGLAENGAYGPDMVYTPADVKAVVEFGMDRGVRVMPEIDSPGHTGSWA 284
           D+QSFPL + S P L  NGAY     YT  D   +V +   RG+ V+ EID PGH  SW 
Sbjct: 222 DTQSFPLEIPSYPKLW-NGAYSSSQRYTFEDAAEIVNYARRRGIHVLAEIDVPGHALSWG 280

Query: 285 LSYPEIVTCANMFWLPAEGEPLAAEPGTGHLNPLIPKTYQVLNNVIHDVTTLFPETFYHA 344
             YP +    N        EPL               T++V++ ++ D + +F   F H 
Sbjct: 281 KGYPALWPSKNC------QEPLDVSSDF---------TFKVIDGILSDFSKIFKFKFVHL 325

Query: 345 GADEVIPGCWKADPTIQKYLSNGG-TLNQILEVFINNTLPFILSLNRTVVYWEDVLLSDT 403
           G DEV   CW A P I ++L     +  +  + F+       LS    ++ WE+  ++  
Sbjct: 326 GGDEVNTTCWSATPRIAQWLKKHRMSEKEAYQYFVLRAQKIALSHGYEIINWEETFINF- 384

Query: 404 VHVPSTILPKEHVIPKTWNNGHDNTKQIVSSGYRAIVSSAAFYYLDCGHGDFTGNNSAYD 463
                + L ++ V+    N G    + + +SG R IVS+  F+YLD  H D         
Sbjct: 385 ----GSKLNRKTVVHNWLNTGL--VENVTASGLRCIVSNQEFWYLD--HID--------- 427

Query: 464 NQTGIDTGNGGSWCGPFKTWQTMYNYDIAYGLSEDEAK-LVLGGEVALWSEQADSTVLDS 522
                              WQ  Y  +    +++ + + LVLGGEV +W E  D++ ++ 
Sbjct: 428 -----------------APWQGFYANEPFQNITDKKQQSLVLGGEVCMWGEHIDASDIEQ 470

Query: 523 RIWPRASAMGEALWSGNRDEKGVKRYGEATDRLNEWRSRMVARGIGAEPI 572
            IWPRA+A  E LW+     K  K     T RL  +R  +  RG+ A P+
Sbjct: 471 TIWPRAAAAAERLWTPY--AKLAKNPNNVTTRLAHFRCLLNQRGVAAAPL 518