Miyakogusa Predicted Gene

Lj0g3v0255569.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0255569.2 CUFF.16784.2
         (325 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G61080.1 | Symbols:  | Protein kinase superfamily protein | c...   485   e-137

>AT3G61080.1 | Symbols:  | Protein kinase superfamily protein |
           chr3:22607152-22608883 FORWARD LENGTH=326
          Length = 326

 Score =  485 bits (1248), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 232/324 (71%), Positives = 259/324 (79%), Gaps = 2/324 (0%)

Query: 2   SSSTCFPSLPRPSLIKTKXXXXXXXXXXXXXXEDPVREWILSEGKATKITRISPVGGGCI 61
           S S CF +  RP L+                 EDP+REWIL+EGKAT+IT+I  VGGGCI
Sbjct: 5   SLSICFSA--RPHLLLRNFSPRPKFVAMAAMSEDPIREWILTEGKATQITKIGSVGGGCI 62

Query: 62  NLASRYDTDTGSFFVKTNRSIGPSMFEAEALGLGAMYETRTIRVPQPYKVGPLPTGGSFI 121
           NLAS Y TD GSFFVKTNRSIGP+MFE EALGL AMYETRTIRVP P+K G LPTGGS+I
Sbjct: 63  NLASHYQTDAGSFFVKTNRSIGPAMFEGEALGLEAMYETRTIRVPNPHKAGELPTGGSYI 122

Query: 122 IMEFIEFGASRGDQSILVRKLAEMQKVGKFSKGFGFDVDNTIGSTPQINTWSSDWVQFYG 181
           IMEFI+FG SRG+Q+ L RKLAEM K GK SKGFGF+VDNTIGSTPQINTWSSDW++FYG
Sbjct: 123 IMEFIDFGGSRGNQAELGRKLAEMHKAGKTSKGFGFEVDNTIGSTPQINTWSSDWIEFYG 182

Query: 182 EHRLGYQLKLALDQYGDRTIYEKGQRLVKNMRPLFDDVVIEPCLLHGDLWSGNISSDKNG 241
           E RLGYQLKLA DQYGD  IY+KG  L++NM PLF++VVIEPCLLHGDLWSGNI+ DKN 
Sbjct: 183 EKRLGYQLKLARDQYGDSAIYQKGHTLIQNMAPLFENVVIEPCLLHGDLWSGNIAYDKNN 242

Query: 242 EPVILDPACYYGHNEAEFGMSWCAGFGGSFYNSYFEVMPKQPGLEKRRDXXXXXXXXXXX 301
           EPVILDPACYYGHNEA+FGMSWCAGFG SFYN+YF+VMPKQ G EKRRD           
Sbjct: 243 EPVILDPACYYGHNEADFGMSWCAGFGESFYNAYFKVMPKQAGYEKRRDLYLLYHYLNHY 302

Query: 302 XXFGSGYRSSSLSIIDDYLALLKA 325
             FGSGYRSS++SIIDDYL +LKA
Sbjct: 303 NLFGSGYRSSAMSIIDDYLRMLKA 326