Miyakogusa Predicted Gene

Lj0g3v0255149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0255149.1 tr|G7I3E3|G7I3E3_MEDTR Appr-1-p processing enzyme
family protein OS=Medicago truncatula GN=MTR_1g007,80.4,0,Appr-1"-p
processing enzyme,Appr-1-p processing; seg,NULL; LOC799852 PROTEIN
(FRAGMENT),NULL; GANGLI,NODE_47902_length_923_cov_60.669556.path1.1
         (204 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40600.1 | Symbols:  | appr-1-p processing enzyme family prot...   292   1e-79
AT1G69340.1 | Symbols:  | appr-1-p processing enzyme family prot...    71   6e-13

>AT2G40600.1 | Symbols:  | appr-1-p processing enzyme family protein
           | chr2:16947012-16948537 REVERSE LENGTH=257
          Length = 257

 Score =  292 bits (747), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 135/190 (71%), Positives = 158/190 (83%)

Query: 9   ASSNGAVRFPLSPTTALIIQQGDITQWSIDSSSDAIVNPANERMLGGGGADGAIHRAAGP 68
           AS +    F LS ++ L I +GDIT+WS+DSSSDAIVNPANERMLGGGGADGAIHRAAGP
Sbjct: 66  ASGDEGAVFNLSDSSLLKILKGDITKWSVDSSSDAIVNPANERMLGGGGADGAIHRAAGP 125

Query: 69  ELLQACYSVPEVRRGVRCPVGEARITPGFRLPVSHVVHTVGPIYHSNSDPATSLASAYRN 128
           +L  ACY VPEVR GVRCP GEARITPGF LP S V+HTVGPIY S+ +P  SL ++Y+N
Sbjct: 126 QLRAACYEVPEVRPGVRCPTGEARITPGFNLPASRVIHTVGPIYDSDVNPQESLTNSYKN 185

Query: 129 SLRVAKEKNIQYIAFPAISCGVYGYPYDEAATVAISTIKEFQNDFKEVHFVLFLRDIYEV 188
           SLRVAKE NI+YIAFPAISCG+YGYP+DEAA + ISTIK+F  DFKEVHFVLF  DI+ V
Sbjct: 186 SLRVAKENNIKYIAFPAISCGIYGYPFDEAAAIGISTIKQFSTDFKEVHFVLFADDIFSV 245

Query: 189 WLNKANDLLK 198
           W+NKA ++L+
Sbjct: 246 WVNKAKEVLQ 255


>AT1G69340.1 | Symbols:  | appr-1-p processing enzyme family protein
           | chr1:26066298-26069644 FORWARD LENGTH=562
          Length = 562

 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 11/143 (7%)

Query: 35  WSIDSSSDAIVNPANERMLGGGGADGAIHRAAGPELLQACYSVPEVRRGVRCPVGEARIT 94
           W+++   DA+VN  NE +     + G +H AAGP L + C ++        C  G A++T
Sbjct: 95  WNLEV--DAVVNSTNENLDEAHSSPG-LHVAAGPGLAEQCATLGG------CRTGMAKVT 145

Query: 95  PGFRLPVSHVVHTVGPIYHSNSDPA--TSLASAYRNSLRVAKEKNIQYIAFPAISCGVYG 152
             + LP   V+HTVGP Y      A   +L+  YR+ L +  +  +Q IA   I      
Sbjct: 146 NAYDLPARRVIHTVGPKYAVKYHTAAENALSHCYRSCLELLIDSGLQSIALGCIYTEAKN 205

Query: 153 YPYDEAATVAISTIKEFQNDFKE 175
           YP + AA VAI T++ F    K+
Sbjct: 206 YPREPAAHVAIRTVRRFLEKQKD 228