Miyakogusa Predicted Gene
- Lj0g3v0254439.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0254439.1 Non Chatacterized Hit- tr|I1QK81|I1QK81_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1,25.98,1e-17,no
description,Armadillo-like helical; PUM,Pumilio RNA-binding repeat;
PUM_HD,Pumilio RNA-binding re,CUFF.16731.1
(449 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G29200.1 | Symbols: APUM1, PUM1 | pumilio 1 | chr2:12549483-1... 700 0.0
AT2G29190.2 | Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071... 699 0.0
AT2G29190.1 | Symbols: APUM2, PUM2 | pumilio 2 | chr2:12544260-1... 699 0.0
AT2G29140.1 | Symbols: APUM3, PUM3 | pumilio 3 | chr2:12531392-1... 693 0.0
AT3G10360.1 | Symbols: APUM4, PUM4 | pumilio 4 | chr3:3211276-32... 544 e-155
AT3G20250.1 | Symbols: APUM5, PUM5 | pumilio 5 | chr3:7059098-70... 470 e-133
AT4G25880.1 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 431 e-121
AT4G25880.2 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 415 e-116
AT4G25880.3 | Symbols: APUM6, PUM6 | pumilio 6 | chr4:13155518-1... 415 e-116
AT1G22240.1 | Symbols: APUM8, PUM8 | pumilio 8 | chr1:7853084-78... 177 2e-44
AT1G78160.1 | Symbols: APUM7, PUM7 | pumilio 7 | chr1:29407900-2... 172 4e-43
AT5G56510.1 | Symbols: APUM12, PUM12 | pumilio 12 | chr5:2288172... 167 1e-41
AT4G08840.1 | Symbols: APUM11, PUM11 | pumilio 11 | chr4:5631298... 157 2e-38
AT1G35730.1 | Symbols: APUM9, PUM9 | pumilio 9 | chr1:13227324-1... 147 1e-35
AT1G35750.1 | Symbols: APUM10, PUM10 | pumilio 10 | chr1:1325339... 143 2e-34
AT5G43090.1 | Symbols: APUM13, PUM13 | pumilio 13 | chr5:1729593... 88 9e-18
AT5G43110.1 | Symbols: APUM14, PUM14 | pumilio 14 | chr5:1730984... 78 1e-14
AT5G59280.1 | Symbols: APUM16, PUM16 | pumilio 16 | chr5:2391414... 70 4e-12
AT4G08560.1 | Symbols: APUM15, PUM15 | pumilio 15 | chr4:5450434... 66 4e-11
AT1G35850.1 | Symbols: APUM17, PUM17 | pumilio 17 | chr1:1333051... 66 4e-11
AT5G09610.1 | Symbols: APUM21, PUM21 | pumilio 21 | chr5:2981156... 63 5e-10
AT5G60110.1 | Symbols: APUM18, PUM18 | pumilio 18 | chr5:2420195... 56 6e-08
AT1G21620.1 | Symbols: APUM20, PUM20 | pumilio 20 | chr1:7579129... 55 7e-08
AT5G60180.1 | Symbols: APUM19, PUM19 | pumilio 19 | chr5:2423302... 49 5e-06
>AT2G29200.1 | Symbols: APUM1, PUM1 | pumilio 1 |
chr2:12549483-12553185 REVERSE LENGTH=968
Length = 968
Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/443 (76%), Positives = 374/443 (84%), Gaps = 9/443 (2%)
Query: 1 MNLLELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMAN-XX 59
M++LELQ+AYLG KSQY VP KSG N H YYG+P +G +SYPGSP+A+
Sbjct: 512 MDMLELQRAYLG----AQKSQYGVPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGM 565
Query: 60 XXXXXXXXXXIRHNDLNMHFASGMRNVAG-VMGPWHLDTGNMDESFASSLLEEFKSNKTK 118
+R +++NM F S RN +G +MG WH+D + DE F SS+LEEFKSNKT+
Sbjct: 566 PNSLMSPYSPMRRDEVNMRFPSATRNYSGGLMGSWHMDA-SFDEGFGSSMLEEFKSNKTR 624
Query: 119 CFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVV 178
FELSEI+GHVVEFS+DQYGSRFIQQKLETATT+EK MVY+EIMP AL LMTDVFGNYV+
Sbjct: 625 GFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPQALVLMTDVFGNYVI 684
Query: 179 QKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIM 238
QKFFEHGL QRRELA KLF HVL LSLQMYGCRVIQKAIEVVDLDQKIKMV+ELDG++M
Sbjct: 685 QKFFEHGLPPQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVM 744
Query: 239 RCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNT 298
RCVRDQNGNHV+QKCIECVPE+ I+FI+STFF VVTLSTHPYGCRVIQRVLEHC DP+T
Sbjct: 745 RCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDT 804
Query: 299 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNV 358
Q KVM+EIL VSMLAQDQYGNYVVQHVLEHGKP ER+ IIKEL G IVQMSQQKFASNV
Sbjct: 805 QSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 864
Query: 359 VEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILS 418
VEKCL FGGP ER+ LVNEMLG+TDENEPLQAMMKDQFANYVVQKVLETCDD QRELIL+
Sbjct: 865 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILT 924
Query: 419 RIKVHLNALKKYTYGKHIVARAE 441
RIKVHL ALKKYTYGKH+VAR E
Sbjct: 925 RIKVHLTALKKYTYGKHVVARIE 947
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 122 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHA------LALMTDVFGN 175
+ E++G +V+ S ++ S +++ L EE+ ++ E++ A+M D F N
Sbjct: 845 IKELAGKIVQMSQQKFASNVVEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFAN 904
Query: 176 YVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQEL 233
YVVQK E QR + ++ H+ L YG V+ + ++V ++ +Q L
Sbjct: 905 YVVQKVLETCDDQQRELILTRIKVHLTALKKYTYGKHVVARIEKLVAAGERRMALQSL 962
>AT2G29190.2 | Symbols: PUM2 | pumilio 2 | chr2:12544260-12548071
REVERSE LENGTH=972
Length = 972
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/443 (76%), Positives = 376/443 (84%), Gaps = 12/443 (2%)
Query: 1 MNLLELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXX 60
MN+LELQ+AYLG KSQY VP KSG N H YG+P +G SYPGSP+A+
Sbjct: 519 MNMLELQRAYLG----AQKSQYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLL 569
Query: 61 XXXXXXX-XXIRHNDLNMHFASGMRNVAG-VMGPWHLDTGNMDESFASSLLEEFKSNKTK 118
+R ++NM + S RN AG VMG WH+D ++DE F SS+LEEFKSNKT+
Sbjct: 570 PNSLVSPCSPMRRGEVNMRYPSATRNYAGGVMGSWHMDA-SLDEGFGSSMLEEFKSNKTR 628
Query: 119 CFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVV 178
FEL+EI+GHVVEFS+DQYGSRFIQQKLETAT++EK MVY+EIMPHALALMTDVFGNYV+
Sbjct: 629 GFELAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVI 688
Query: 179 QKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIM 238
QKFFEHGL QRRELA+KLF +VL LSLQMYGCRVIQKAIEVVDLDQKIKMV+ELDG++M
Sbjct: 689 QKFFEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVM 748
Query: 239 RCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNT 298
RCVRDQNGNHV+QKCIECVPE+ I+FI+STFF VVTLSTHPYGCRVIQRVLEHC DP+T
Sbjct: 749 RCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDT 808
Query: 299 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNV 358
Q KVMDEI+ +SMLAQDQYGNYV+QHVLEHGKP ER+ IIKEL G IVQMSQQKFASNV
Sbjct: 809 QSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 868
Query: 359 VEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILS 418
VEKCL FGGP ER+FLVNEMLG+TDENEPLQAMMKDQFANYVVQKVLETCDD QRELIL
Sbjct: 869 VEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILG 928
Query: 419 RIKVHLNALKKYTYGKHIVARAE 441
RIKVHLNALKKYTYGKHIVAR E
Sbjct: 929 RIKVHLNALKKYTYGKHIVARVE 951
>AT2G29190.1 | Symbols: APUM2, PUM2 | pumilio 2 |
chr2:12544260-12548071 REVERSE LENGTH=972
Length = 972
Score = 699 bits (1803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 338/443 (76%), Positives = 376/443 (84%), Gaps = 12/443 (2%)
Query: 1 MNLLELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMANXXX 60
MN+LELQ+AYLG KSQY VP KSG N H YG+P +G SYPGSP+A+
Sbjct: 519 MNMLELQRAYLG----AQKSQYGVPY--KSGSPNSHTDYGSPTFG---SYPGSPLAHHLL 569
Query: 61 XXXXXXX-XXIRHNDLNMHFASGMRNVAG-VMGPWHLDTGNMDESFASSLLEEFKSNKTK 118
+R ++NM + S RN AG VMG WH+D ++DE F SS+LEEFKSNKT+
Sbjct: 570 PNSLVSPCSPMRRGEVNMRYPSATRNYAGGVMGSWHMDA-SLDEGFGSSMLEEFKSNKTR 628
Query: 119 CFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVV 178
FEL+EI+GHVVEFS+DQYGSRFIQQKLETAT++EK MVY+EIMPHALALMTDVFGNYV+
Sbjct: 629 GFELAEIAGHVVEFSSDQYGSRFIQQKLETATSDEKNMVYEEIMPHALALMTDVFGNYVI 688
Query: 179 QKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIM 238
QKFFEHGL QRRELA+KLF +VL LSLQMYGCRVIQKAIEVVDLDQKIKMV+ELDG++M
Sbjct: 689 QKFFEHGLPPQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMVKELDGHVM 748
Query: 239 RCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNT 298
RCVRDQNGNHV+QKCIECVPE+ I+FI+STFF VVTLSTHPYGCRVIQRVLEHC DP+T
Sbjct: 749 RCVRDQNGNHVVQKCIECVPEENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDT 808
Query: 299 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNV 358
Q KVMDEI+ +SMLAQDQYGNYV+QHVLEHGKP ER+ IIKEL G IVQMSQQKFASNV
Sbjct: 809 QSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 868
Query: 359 VEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILS 418
VEKCL FGGP ER+FLVNEMLG+TDENEPLQAMMKDQFANYVVQKVLETCDD QRELIL
Sbjct: 869 VEKCLTFGGPEEREFLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILG 928
Query: 419 RIKVHLNALKKYTYGKHIVARAE 441
RIKVHLNALKKYTYGKHIVAR E
Sbjct: 929 RIKVHLNALKKYTYGKHIVARVE 951
>AT2G29140.1 | Symbols: APUM3, PUM3 | pumilio 3 |
chr2:12531392-12535060 FORWARD LENGTH=964
Length = 964
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/443 (74%), Positives = 373/443 (84%), Gaps = 9/443 (2%)
Query: 1 MNLLELQKAYLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPGSPMAN-XX 59
MN+LE+Q+AYLG+ KSQY +P KSG N H YYG+P +G +SYPGSP+A+
Sbjct: 508 MNMLEIQRAYLGS----QKSQYGLPY--KSGSPNSHSYYGSPTFGSNMSYPGSPLAHHGM 561
Query: 60 XXXXXXXXXXIRHNDLNMHFASGMRN-VAGVMGPWHLDTGNMDESFASSLLEEFKSNKTK 118
+R ++NM + + RN GVMG WH+D ++DE F SS+LEEFKSNKT+
Sbjct: 562 PNSLMSPYSPMRRGEVNMRYPAATRNYTGGVMGSWHMDA-SLDEGFGSSMLEEFKSNKTR 620
Query: 119 CFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVV 178
FELSEI+GHVVEFS+DQYGSRFIQQKLETATT+EK MVY+EIMP ALALMTDVFGNYV+
Sbjct: 621 GFELSEIAGHVVEFSSDQYGSRFIQQKLETATTDEKNMVYEEIMPKALALMTDVFGNYVI 680
Query: 179 QKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIM 238
QKFFEHGL QRREL KL +VL LSLQMYGCRVIQKAIEVVDLDQKI+MV+ELDG++M
Sbjct: 681 QKFFEHGLPPQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMVKELDGHVM 740
Query: 239 RCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNT 298
RCVRDQNGNHV+QKCIECVPE+ I+FI+STFF VVTLSTHPYGCRVIQRVLEHC +P+T
Sbjct: 741 RCVRDQNGNHVVQKCIECVPEENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDT 800
Query: 299 QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNV 358
Q KVM+EIL VSML QDQYGNYVVQHVLEHGKP ER+ IIKEL G IVQMSQQKFASNV
Sbjct: 801 QSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTVIIKELAGKIVQMSQQKFASNV 860
Query: 359 VEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILS 418
VEKCL FGGP ER+ LVNEMLG+TDENEPLQAMMKDQFANYVVQKVLETCDD QRELIL+
Sbjct: 861 VEKCLTFGGPEERELLVNEMLGTTDENEPLQAMMKDQFANYVVQKVLETCDDQQRELILT 920
Query: 419 RIKVHLNALKKYTYGKHIVARAE 441
RIKVHLNALKKYTYGKHIVAR E
Sbjct: 921 RIKVHLNALKKYTYGKHIVARVE 943
>AT3G10360.1 | Symbols: APUM4, PUM4 | pumilio 4 |
chr3:3211276-3215144 REVERSE LENGTH=1003
Length = 1003
Score = 544 bits (1402), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/438 (61%), Positives = 329/438 (75%), Gaps = 26/438 (5%)
Query: 10 YLGNLLSPHKSQYNVPLGGKSGGSNHHGYYGNPAYGVGLSYPG----SPMANXXXXXXXX 65
YL LL+ ++ Q LG + ++ ++ +P+Y +G Y G SP N
Sbjct: 564 YLAMLLAQNRQQ----LGNLNAANSR--FFESPSYDLGNMYLGNHLPSPSKNSR------ 611
Query: 66 XXXXIRHNDLNMHFASGMRNV--AGVMGPWHLDTGNMDESFASSLLEEFKSNKTKCFELS 123
++ M ++ M V G+ G H+D G+ E+ SLLE FK+NKT+ ELS
Sbjct: 612 -----NFQNMRMSQSASMMKVPFGGLQGSSHVDIGSTAEA---SLLEGFKNNKTRSLELS 663
Query: 124 EISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFE 183
EI GHV+EFS DQYGSRFIQQKLETAT EEK ++ EI+P+ LMTDVFGNYV+QKFFE
Sbjct: 664 EIVGHVIEFSMDQYGSRFIQQKLETATDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFE 723
Query: 184 HGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRD 243
HG QR+ELA ++ HVL LSLQMYGCRVIQKA+EVV+L+Q+ +MV+ELDG++M+CV D
Sbjct: 724 HGTTKQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMVKELDGSVMKCVHD 783
Query: 244 QNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVM 303
QNGNHVIQKCIE +P+D I FI+S+F+ +V+ LSTHPYGCRVIQRVLEH D TQ+ +M
Sbjct: 784 QNGNHVIQKCIERLPQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIETQRIIM 843
Query: 304 DEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNVVEKCL 363
+EI+ +V LAQDQYGNYV+QH+++HGKPHERS II +L G IV+MSQQKFASNVVEKCL
Sbjct: 844 EEIMDSVCTLAQDQYGNYVIQHIIQHGKPHERSEIINKLAGQIVKMSQQKFASNVVEKCL 903
Query: 364 AFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVH 423
FGGP ERQ LVNEMLG TDENEPLQAMMKD F NYVVQKVLETCDD LILSRIKVH
Sbjct: 904 TFGGPEERQVLVNEMLGYTDENEPLQAMMKDPFGNYVVQKVLETCDDQSLALILSRIKVH 963
Query: 424 LNALKKYTYGKHIVARAE 441
LNALK+YTYGKHIVAR E
Sbjct: 964 LNALKRYTYGKHIVARVE 981
>AT3G20250.1 | Symbols: APUM5, PUM5 | pumilio 5 |
chr3:7059098-7062660 REVERSE LENGTH=961
Length = 961
Score = 470 bits (1209), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/430 (54%), Positives = 292/430 (67%), Gaps = 11/430 (2%)
Query: 23 NVPLGGKSG--GSNHHGYYG--NPAYGVGLSYPGSPMANXXXXXXXXXXXXI---RHNDL 75
N PL G H G Y P V YPGSP+A+ R ++
Sbjct: 516 NSPLSPGYGLQSPRHMGNYFAVPPGVRVMPQYPGSPLASPVMPSSPVGGMMSHFGRRSET 575
Query: 76 NMHFASGMRNVAGVMGPWHLDTGN----MDESFASSLLEEFKSNKTKCFELSEISGHVVE 131
H RN G W + G +D+ S L+E KS + ELS+I+G VVE
Sbjct: 576 RYHQQGPSRNTGIYPGGWQGNRGGASSIVDDLKRHSFLDELKSPNARKLELSDIAGRVVE 635
Query: 132 FSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRR 191
FS DQ+GSRFIQQKLE + EEK V+ E++P A LMTDVFGNYV+QKF EHG +QR
Sbjct: 636 FSVDQHGSRFIQQKLEHCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQRE 695
Query: 192 ELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRDQNGNHVIQ 251
EL +L +++LSLQMYGCRVIQKA+EV+D+DQK ++++ELDGN+++CVRDQNGNHVIQ
Sbjct: 696 ELVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELIRELDGNVLKCVRDQNGNHVIQ 755
Query: 252 KCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVS 311
KCIE +P I F+++ F QV TLSTHPYGCRVIQR+LEHC D ++DEIL +
Sbjct: 756 KCIESMPAGRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCIIDEILESAF 815
Query: 312 MLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNVVEKCLAFGGPAER 371
LA DQYGNYV QHVLE GKP ER II++LTGN+VQMSQ K+ASNVVEKCL ER
Sbjct: 816 ALAHDQYGNYVTQHVLERGKPDERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTER 875
Query: 372 QFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKVHLNALKKYT 431
+FL+ E++G ++E+ L AMMKDQFANYVVQKVLE D QRE+++ R+K+HL +L+KYT
Sbjct: 876 EFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISKDQQREILVQRMKIHLQSLRKYT 935
Query: 432 YGKHIVARAE 441
YGKHIVAR E
Sbjct: 936 YGKHIVARFE 945
>AT4G25880.1 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159078 FORWARD LENGTH=861
Length = 861
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 197/335 (58%), Positives = 259/335 (77%)
Query: 107 SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHAL 166
+ LEE KS K + F+LS+I+GH+VEFSADQ+GSRFIQQKLE EEK V++EI+PHA
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFSADQHGSRFIQQKLENCKPEEKAAVFREILPHAC 574
Query: 167 ALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQK 226
LMTDVFGNYV+QKFFE+G ++QR+ELA++L ++ LSLQMYGCRVIQKA++V++ DQ+
Sbjct: 575 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 634
Query: 227 IKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVI 286
+++ +ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 635 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 694
Query: 287 QRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNI 346
QR+LE C + + + +EIL +V +L++DQYGNYV QHVLE G ER I ++L+G+I
Sbjct: 695 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 754
Query: 347 VQMSQQKFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLE 406
VQ+S KFASNV+EKCL +GG ER ++ E+ G + L MMKDQ+ NYVVQK+ E
Sbjct: 755 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 814
Query: 407 TCDDHQRELILSRIKVHLNALKKYTYGKHIVARAE 441
TC QR + SR+++H +ALKKYTYGKHIV+R E
Sbjct: 815 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLE 849
>AT4G25880.2 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159078 FORWARD LENGTH=855
Length = 855
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/335 (57%), Positives = 253/335 (75%), Gaps = 6/335 (1%)
Query: 107 SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHAL 166
+ LEE KS K + F+LS+I+GH+VEFS RFIQQKLE EEK V++EI+PHA
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFS------RFIQQKLENCKPEEKAAVFREILPHAC 568
Query: 167 ALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQK 226
LMTDVFGNYV+QKFFE+G ++QR+ELA++L ++ LSLQMYGCRVIQKA++V++ DQ+
Sbjct: 569 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 628
Query: 227 IKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVI 286
+++ +ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 629 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 688
Query: 287 QRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNI 346
QR+LE C + + + +EIL +V +L++DQYGNYV QHVLE G ER I ++L+G+I
Sbjct: 689 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 748
Query: 347 VQMSQQKFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLE 406
VQ+S KFASNV+EKCL +GG ER ++ E+ G + L MMKDQ+ NYVVQK+ E
Sbjct: 749 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 808
Query: 407 TCDDHQRELILSRIKVHLNALKKYTYGKHIVARAE 441
TC QR + SR+++H +ALKKYTYGKHIV+R E
Sbjct: 809 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLE 843
>AT4G25880.3 | Symbols: APUM6, PUM6 | pumilio 6 |
chr4:13155518-13159070 FORWARD LENGTH=858
Length = 858
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 192/335 (57%), Positives = 253/335 (75%), Gaps = 6/335 (1%)
Query: 107 SLLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHAL 166
+ LEE KS K + F+LS+I+GH+VEFS RFIQQKLE EEK V++EI+PHA
Sbjct: 515 NFLEELKSGKGRRFDLSDITGHIVEFS------RFIQQKLENCKPEEKAAVFREILPHAC 568
Query: 167 ALMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQK 226
LMTDVFGNYV+QKFFE+G ++QR+ELA++L ++ LSLQMYGCRVIQKA++V++ DQ+
Sbjct: 569 KLMTDVFGNYVIQKFFEYGNSTQRKELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQR 628
Query: 227 IKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVI 286
+++ +ELDG +MRCVRDQNGNHVIQKCIE +P D + F++ F QV +LS HPYGCRVI
Sbjct: 629 VRLARELDGQVMRCVRDQNGNHVIQKCIENIPADKVGFMLYAFRGQVSSLSMHPYGCRVI 688
Query: 287 QRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNI 346
QR+LE C + + + +EIL +V +L++DQYGNYV QHVLE G ER I ++L+G+I
Sbjct: 689 QRLLERCSHDHQCRFITEEILESVCVLSKDQYGNYVTQHVLEKGTSEERERIGRKLSGHI 748
Query: 347 VQMSQQKFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLE 406
VQ+S KFASNV+EKCL +GG ER ++ E+ G + L MMKDQ+ NYVVQK+ E
Sbjct: 749 VQLSLHKFASNVIEKCLEYGGRVERDLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFE 808
Query: 407 TCDDHQRELILSRIKVHLNALKKYTYGKHIVARAE 441
TC QR + SR+++H +ALKKYTYGKHIV+R E
Sbjct: 809 TCTADQRLTLFSRVRMHASALKKYTYGKHIVSRLE 843
>AT1G22240.1 | Symbols: APUM8, PUM8 | pumilio 8 |
chr1:7853084-7854963 FORWARD LENGTH=515
Length = 515
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/323 (31%), Positives = 179/323 (55%), Gaps = 11/323 (3%)
Query: 121 ELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQK 180
++SE G+V + DQ+G RF+Q E + + +++ E++PH + LM D FGNY++QK
Sbjct: 195 KVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNYLMQK 254
Query: 181 FFEHGLASQRRELANKLFS---HVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQE-LDGN 236
+ QR ++ + S ++ +SL YG RV+Q+ +E + ++I +V+ L
Sbjct: 255 LLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPG 314
Query: 237 IMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDP 296
+ +RD NGNHVIQ+C++C+ + +FI + ++TH +GC V+Q+ + +
Sbjct: 315 FLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGL 374
Query: 297 NTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFAS 356
++K++ EI LAQD YGNY VQ VLE +A++ +L G+ V++S QKF+S
Sbjct: 375 Q-REKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQKFSS 433
Query: 357 NVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELI 416
++VE+CL P R +V E++ +++D +AN+V+Q L +
Sbjct: 434 HMVERCLTH-CPESRPQIVRELISVPH----FDILIQDPYANFVIQAALAVTKGSLHATL 488
Query: 417 LSRIKVHLNALKKYTYGKHIVAR 439
+ I+ H + L+ Y K I +R
Sbjct: 489 VEVIRPH-SILRNNPYCKRIFSR 510
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 94/215 (43%), Gaps = 9/215 (4%)
Query: 108 LLEEFKSNKTKCFELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALA 167
L+E K+ K S + + D G+ IQ+ L+ +TE+ ++++ +
Sbjct: 294 LVESIKTRKQISLVKSALRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCID 353
Query: 168 LMTDVFGNYVVQKFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKI 227
+ T G V+QK + QR +L ++ + L L+ YG +Q +E+ D
Sbjct: 354 IATHRHGCCVLQKCIAYSSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIA 413
Query: 228 KMVQELDGNIMRCVRDQNGNHVIQKCI----ECVPEDAIDFIVSTFFDQVVTLSTHPYGC 283
M+ +L G+ + + +H++++C+ E P+ + I FD ++ PY
Sbjct: 414 AMLAQLKGHYVELSMQKFSSHMVERCLTHCPESRPQIVRELISVPHFDILI---QDPYAN 470
Query: 284 RVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQY 318
VIQ L K + + E++ S+L + Y
Sbjct: 471 FVIQAALAVTK--GSLHATLVEVIRPHSILRNNPY 503
>AT1G78160.1 | Symbols: APUM7, PUM7 | pumilio 7 |
chr1:29407900-29410184 FORWARD LENGTH=650
Length = 650
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 180/322 (55%), Gaps = 11/322 (3%)
Query: 122 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 181
+ +I G+V + DQ+G RF+Q+ + T+ + +++ E++ H + LM D FGNY++QK
Sbjct: 331 MCDIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKL 390
Query: 182 FEHGLASQRREL---ANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQ-ELDGNI 237
+ QR ++ A + ++ +SL YG RV+Q+ +E + ++I +V+ L
Sbjct: 391 LDVCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF 450
Query: 238 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 297
+ ++D NGNHVIQ+C++C+ + FI ++TH +GC V+Q+ + +
Sbjct: 451 LDLIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMR-Q 509
Query: 298 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASN 357
++K++ EI +LAQD +GNY VQ V+E P + ++ +L G+ VQ+S QKF+S+
Sbjct: 510 QREKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSH 569
Query: 358 VVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELIL 417
+VE+CL P R +V E++ ++ +++D +AN+V+Q L ++
Sbjct: 570 MVERCL-MHCPESRPQIVRELVSVPHFDQ----LLQDPYANFVIQAALAATKGPLHASLV 624
Query: 418 SRIKVHLNALKKYTYGKHIVAR 439
I+ H + L+ Y K I +R
Sbjct: 625 EVIRPH-SILRNNPYCKRIFSR 645
>AT5G56510.1 | Symbols: APUM12, PUM12 | pumilio 12 |
chr5:22881721-22883842 FORWARD LENGTH=596
Length = 596
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 175/326 (53%), Gaps = 9/326 (2%)
Query: 122 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 181
++E G + + DQ+G RF+Q+ + M++ EI+ + LM D FGNY+VQK
Sbjct: 275 IAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNYLVQKL 334
Query: 182 FEHGLASQRRELANKLFSH---VLTLSLQMYGCRVIQKAIEVVDLDQKIKMV-QELDGNI 237
E QR ++ + + ++ +S M+G R +QK +E +++I ++ L I
Sbjct: 335 LEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALKHGI 394
Query: 238 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 297
+ +++ NGNHV+Q+C++ + F+ V L+T +GC V+Q+ L + +
Sbjct: 395 VHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQKCLGY-SEGE 453
Query: 298 TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASN 357
+Q ++ EI +L+QD +GNYV+Q+V E I+++L GN ++S QK +SN
Sbjct: 454 QKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTELSMQKCSSN 513
Query: 358 VVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELIL 417
VVEKCL R ++ E++ L +M D + NYV+Q L+ + L++
Sbjct: 514 VVEKCLKLADDKHRARIIRELINYGR----LDQVMLDPYGNYVIQAALKQSKGNVHALLV 569
Query: 418 SRIKVHLNALKKYTYGKHIVARAENK 443
IK+++++L+ YGK +++ +K
Sbjct: 570 DAIKLNISSLRTNPYGKKVLSALSSK 595
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 98/216 (45%), Gaps = 9/216 (4%)
Query: 225 QKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCR 284
QK + E G I +DQ+G +Q+ + I+ I + D + L P+G
Sbjct: 270 QKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDPFGNY 329
Query: 285 VIQRVLEHCKDPNTQQKV--MDEILGAVSMLAQDQYGNYVVQHVLEHGKPHER-SAIIKE 341
++Q++LE C + Q V + G + ++ D +G VQ ++E K E S II
Sbjct: 330 LVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISA 389
Query: 342 LTGNIVQMSQQKFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVV 401
L IV + + ++VV++CL + P +FL + E + D+ V+
Sbjct: 390 LKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVE------LATDRHGCCVL 443
Query: 402 QKVLETCDDHQRELILSRIKVHLNALKKYTYGKHIV 437
QK L + Q++ ++S I + L + +G +++
Sbjct: 444 QKCLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVL 479
>AT4G08840.1 | Symbols: APUM11, PUM11 | pumilio 11 |
chr4:5631298-5633779 FORWARD LENGTH=556
Length = 556
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 174/317 (54%), Gaps = 13/317 (4%)
Query: 127 GHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGL 186
G V + DQ G R +Q+ ++ + ++++E++ + + L TD FGNY++QK E
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303
Query: 187 ASQRRELANKLFSH---VLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQE-LDGNIMRCVR 242
QR ++ +L S ++ +S+ YG RV+QK IE V ++I +V+ L + R
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363
Query: 243 DQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKV 302
+ NGNHVI C++ + FI+ + ++T +GC V+QR + + +K+
Sbjct: 364 ELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVG-EQHEKL 422
Query: 303 MDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNVVEKC 362
+DEI +LAQD +GNY+VQ+++E K ++ EL GN V+++ QKF S+VVEKC
Sbjct: 423 VDEISRNSLLLAQDPFGNYLVQYIIE--KKVGGVNVLFELRGNYVKLATQKFGSHVVEKC 480
Query: 363 LAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRELILSRIKV 422
L + P R +VNE++ + +++D +ANYV+Q L R ++ +++
Sbjct: 481 LRY-YPESRSQIVNELVSVLN----FGYLLQDPYANYVIQCALSKTKGFVRASLVEKVRR 535
Query: 423 HLNALKKYTYGKHIVAR 439
+ N LK Y K I ++
Sbjct: 536 YEN-LKMTPYCKRIFSK 551
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 122/231 (52%), Gaps = 19/231 (8%)
Query: 121 ELSEISGHVVEFSADQYGSRFIQQKLETATTEEK-TMVYQEIMPHALALMTDVFGNYVVQ 179
L+ G +V+ S + YG+R +Q+ +ET TT+E+ ++V ++P L+L ++ GN+V+
Sbjct: 313 RLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFRELNGNHVIL 372
Query: 180 ---KFFEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGN 236
KFF E A K + ++ +GC V+Q+ + +Q K+V E+ N
Sbjct: 373 NCLKFFSPNDNKFILEAATKF---CIEIATTRHGCCVLQRCVSYSVGEQHEKLVDEISRN 429
Query: 237 IMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFD---QVVTLSTHPYGCRVIQRVLEHC 293
+ +D GN+++Q IE V+ F+ V L+T +G V+++ L +
Sbjct: 430 SLLLAQDPFGNYLVQYIIEKKVGG-----VNVLFELRGNYVKLATQKFGSHVVEKCLRYY 484
Query: 294 KDPNTQQKVMDEILGAVSM--LAQDQYGNYVVQHVLEHGKPHERSAIIKEL 342
P ++ ++++E++ ++ L QD Y NYV+Q L K R+++++++
Sbjct: 485 --PESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKV 533
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 107/212 (50%), Gaps = 9/212 (4%)
Query: 198 FSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECV 257
+ V ++ GCR++QK ++ + + + +E+ N++ D GN++IQK IE
Sbjct: 243 YGSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVC 302
Query: 258 PEDAIDFIVSTFFDQ---VVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLA 314
E+ I+ + +V +S + YG RV+Q+++E V ++ L
Sbjct: 303 NEEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLF 362
Query: 315 QDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNVVEKCLAFGGPAERQFL 374
++ GN+V+ + L+ P++ I++ T ++++ + V+++C+++ + + L
Sbjct: 363 RELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKL 422
Query: 375 VNEMLGSTDENEPLQAMMKDQFANYVVQKVLE 406
V+E+ N L A +D F NY+VQ ++E
Sbjct: 423 VDEI----SRNSLLLA--QDPFGNYLVQYIIE 448
>AT1G35730.1 | Symbols: APUM9, PUM9 | pumilio 9 |
chr1:13227324-13229796 REVERSE LENGTH=564
Length = 564
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 175/330 (53%), Gaps = 28/330 (8%)
Query: 124 EISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFE 183
EI G V + DQ G R +Q+ +E T E ++ I+ H + L D FGNY+VQK F+
Sbjct: 249 EIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKLFD 308
Query: 184 HGLASQRRELANKLFSH---VLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQE-LDGNIMR 239
QR + + L S+ ++ + L YG RV+QK IE V Q+I +V+ L +
Sbjct: 309 VSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGFLA 368
Query: 240 CVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNT- 298
V+D NGNHVIQ C++ + + +F++ ++ H +GC V+Q C N+
Sbjct: 369 LVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCVLQ-----CCISNSV 423
Query: 299 ---QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAI--IKELTGNIVQMSQQK 353
+++++ EI L+QD +GNYVVQ++++ + SA+ + + + +++ QK
Sbjct: 424 GLQRERLVAEISRNSLHLSQDPFGNYVVQYLID----QQVSAVKLLVQFRMHYAELATQK 479
Query: 354 FASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQR 413
F+S+V+EKCL P R +V E+L + + +++D +ANYV+Q L R
Sbjct: 480 FSSHVIEKCLR-KYPESRAEIVRELLCVPN----FEYLLQDPYANYVIQTALSVTKGPVR 534
Query: 414 ELILSRI----KVHLNALKKYTYGKHIVAR 439
+++++ K+H + K + K I+ +
Sbjct: 535 AKLVAKVYRYGKLHSSPYCKKIFSKTILKK 564
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 4/136 (2%)
Query: 303 MDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNVVEKC 362
M EI G+V+++A+DQ G V+Q ++E G HE I+ + ++V++S F + +V+K
Sbjct: 247 MVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELSMDPFGNYIVQKL 306
Query: 363 LAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQR-ELILSRIK 421
+R +V+ + + E L + + + VVQK++ET Q+ L+ S +K
Sbjct: 307 FDVSDEEQRTLIVSVLTSNPRE---LIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLK 363
Query: 422 VHLNALKKYTYGKHIV 437
AL K G H++
Sbjct: 364 PGFLALVKDLNGNHVI 379
>AT1G35750.1 | Symbols: APUM10, PUM10 | pumilio 10 |
chr1:13253398-13255570 REVERSE LENGTH=528
Length = 528
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 165/326 (50%), Gaps = 23/326 (7%)
Query: 124 EISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFE 183
EI G V + DQ G R +Q+ +E T + +++ EI+ H + L D GNY+VQK
Sbjct: 213 EIYGSVNLMARDQIGCRALQKLVEEGTVLDSKVIFLEIIDHVVELSMDPLGNYIVQKLLV 272
Query: 184 HGLASQRRELANKLFS---HVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQE-LDGNIMR 239
QR + + L S ++ + L G RVIQK I+ V Q+I +V+ L+ +
Sbjct: 273 VSDEEQRTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALVKSALEPGFLV 332
Query: 240 CVRDQNGNHVIQKCIE-CVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNT 298
V D NG HV+Q C+E VP D F+V + L+TH YGC V+Q C NT
Sbjct: 333 LVNDSNGYHVLQSCLEFLVPNDN-KFVVEAATEYCAQLATHQYGCYVLQ-----CSLINT 386
Query: 299 ----QQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKF 354
++++ EI L+QD +GNYVVQ +++ ++ + ++++ QKF
Sbjct: 387 VGLQHERLVAEISRDSLRLSQDPFGNYVVQCLIDQQV--SSVNLLLPFRTHCIELATQKF 444
Query: 355 ASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQRE 414
+S+V+EKCL P R +V E+L + + +++D +ANYV+Q L R
Sbjct: 445 SSHVIEKCLR-KYPESRAEIVRELLSYPN----FEQLLQDPYANYVIQTALSVTKGAVRA 499
Query: 415 LILSRIKVHLNALKKYTYGKHIVARA 440
++ ++K L+ Y K I ++
Sbjct: 500 RLVEKVK-RFGKLQSNPYCKKIFSKT 524
>AT5G43090.1 | Symbols: APUM13, PUM13 | pumilio 13 |
chr5:17295933-17298171 FORWARD LENGTH=527
Length = 527
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/326 (20%), Positives = 145/326 (44%), Gaps = 25/326 (7%)
Query: 127 GHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGL 186
G + D+ S+ +++ + T E M++ ++ LM D FGN VV+
Sbjct: 211 GSYFSIATDRVWSKELEKTIFVGTKETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCS 270
Query: 187 ASQR-----------RELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDG 235
+ Q + N F+ + TL++Q+ + ++A +Q +++ +
Sbjct: 271 SEQIILIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERAN-----NQIPRIMDAISS 325
Query: 236 NIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKD 295
++ R+ N +VI C ++ ++ GC ++Q+ + +
Sbjct: 326 VALQLTRNTNAKYVILACFRMFTSSQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDKERV 385
Query: 296 PN--TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQK 353
PN +Q+++ E++ L + +GNYVVQ+V+E HE ++ +L N +++ K
Sbjct: 386 PNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLVNKLLRNYAHLARNK 445
Query: 354 FASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQR 413
+ S+VV+K L G + +V+ + G + ++ D F NYV+Q + R
Sbjct: 446 YGSHVVQKLLKLRGIDSKLIVVDLLRG-------IDTLLLDPFGNYVIQTAWFVSKEDVR 498
Query: 414 ELILSRIKVHLNALKKYTYGKHIVAR 439
+++ I+ ++ ++ +G I+ +
Sbjct: 499 QMLRYYIERNIRLMRCNKFGNKILEK 524
>AT5G43110.1 | Symbols: APUM14, PUM14 | pumilio 14 |
chr5:17309842-17311937 FORWARD LENGTH=518
Length = 518
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 143/331 (43%), Gaps = 22/331 (6%)
Query: 120 FELSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQ 179
F+ ++ F+ D+ S + + T E +Y ++ LM D +G+ VVQ
Sbjct: 196 FDYNQCQASFSAFAKDKEMSERLGMSIFQGTKETVDAIYNGLIGDICELMVDPYGSDVVQ 255
Query: 180 KFFEHGLASQRRELAN----KLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELDG 235
+ Q +L + ++F V + + G IQ + ++ K ++ + +D
Sbjct: 256 LLMRRCSSEQIVQLVDIVTQQMFQFV-NICIDSLGTNAIQVLLTCINERAKDQIPRIVD- 313
Query: 236 NIMRCVRDQ--NGNH---VIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVL 290
++R V Q NH VI C P ++ ++ +GC ++Q
Sbjct: 314 -VVRTVALQLSKSNHAIFVILACFRLFPLHC-RLLLELIVQNCHQIAIDQHGCCLLQLCF 371
Query: 291 EHCKDPN--TQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQ 348
+ PN +Q+++ E + L + YGNYVVQ+++E + A++++L GN
Sbjct: 372 NKDRVPNLEIRQRLIMEAIANALRLCLNCYGNYVVQYIVELNNRYLIDALVRQLIGNYAH 431
Query: 349 MSQQKFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETC 408
+++ K+ S+ V+K L R +++ + + ++ D F NYV+Q
Sbjct: 432 LARNKYGSHAVQKLLKLRWIDSRVIVIDLL-------REIDTLLLDPFGNYVIQTAWFVS 484
Query: 409 DDHQRELILSRIKVHLNALKKYTYGKHIVAR 439
D R ++ I+ ++ ++ +G ++ +
Sbjct: 485 KDDVRRMLRYHIERNIPMMRCNKFGNKVLEK 515
>AT5G59280.1 | Symbols: APUM16, PUM16 | pumilio 16 |
chr5:23914141-23915139 REVERSE LENGTH=332
Length = 332
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 93/197 (47%), Gaps = 4/197 (2%)
Query: 210 GCRVIQKAIEVVDLDQKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTF 269
G + +QK + + D D + + + + + D+ ++V + + +D + +
Sbjct: 96 GSKTLQKLMGMSD-DMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQQDKRELMYDQI 154
Query: 270 FDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEH 329
L+ YGC + ++ DP + +++D + +L+ D YGN+VVQHVL+
Sbjct: 155 LRYACFLAGDQYGCIALNEIITDLDDPYYRDQLLDIVANNALLLSNDAYGNFVVQHVLKL 214
Query: 330 GKPHERSAIIKELTGNIVQMSQQKFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQ 389
I +L G V++S +K+ S +VE+ L G +V ++L + E L
Sbjct: 215 RDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLE-AGDVPMATVVLDLLAC--KTEMLI 271
Query: 390 AMMKDQFANYVVQKVLE 406
+ + ++ N+VV K LE
Sbjct: 272 RLARSEYGNFVVCKALE 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 10/202 (4%)
Query: 133 SADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRE 192
+ ++ GS+ +Q KL + + ++ IM + +MTD + +YV + +R
Sbjct: 91 TTNKNGSKTLQ-KLMGMSDDMDVFFFEAIMRLFIHVMTDKYASYVTIQGMRVFQQDKREL 149
Query: 193 LANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQELD---GNIMRCVRDQNGNHV 249
+ +++ + L+ YGC + + I DLD Q LD N + D GN V
Sbjct: 150 MYDQILRYACFLAGDQYGCIALNEII--TDLDDPYYRDQLLDIVANNALLLSNDAYGNFV 207
Query: 250 IQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGA 309
+Q ++ I V LS YG +++R+LE P V+D +
Sbjct: 208 VQHVLKLRDSRCTRNIADKLCGYCVELSFKKYGSYIVERLLEAGDVP-MATVVLDLLACK 266
Query: 310 VSM---LAQDQYGNYVVQHVLE 328
M LA+ +YGN+VV LE
Sbjct: 267 TEMLIRLARSEYGNFVVCKALE 288
>AT4G08560.1 | Symbols: APUM15, PUM15 | pumilio 15 |
chr4:5450434-5453183 FORWARD LENGTH=477
Length = 477
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 141/337 (41%), Gaps = 27/337 (8%)
Query: 81 SGMRNVAGVMGPWHLDTGNMDESFASSLLEEFKSNKTKCF-ELSEISGHVVEFSADQYGS 139
SG R V+G G + + D AS L F S + + I ++ + D S
Sbjct: 110 SGGRTVSGSRGI----SRSTDFVGASQNLRPFVSLDDDAYGYMYGIRNTLLSRAKDGIES 165
Query: 140 RFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKFFEHGLASQRRELANKLFS 199
+Q + E ++ ++ H LM D +G+ V +K E Q + + +
Sbjct: 166 HMLQYVIAKGLKETIDKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLE 225
Query: 200 H---VLTLSLQMYGCRVIQKAIEVVDLDQKI-KMVQELDGNIMRCVRDQNGNHVIQKCIE 255
+ L + +G IQ + + +++I + ++ L + +D + VI C
Sbjct: 226 EPFEFVRLCVHTHGTHAIQGLMRSLCSEEQISRFMETLCYVSLLLTKDVIAHRVILFCFN 285
Query: 256 CVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKVMDEILGAVSMLAQ 315
+++ ++ GC ++++++ + ++ EI+ L
Sbjct: 286 QFSPSHTRYLLEVIVQNCYQVAIDQNGCCMLKKLIRQ-SSRELRDPLIKEIISIAVRLCG 344
Query: 316 DQYG----------NYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNVVEKCLAF 365
+ YG NYVVQ++L SA+ K L GN VQ+S K+ S+VV+KCL
Sbjct: 345 NCYGTLTPKSLLVRNYVVQYLLRLKDYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLES 404
Query: 366 GGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQ 402
+ R+ ++ E+L D +++ D + +YV+Q
Sbjct: 405 REFSSRR-IIAELLSDID------SLLVDPYGDYVIQ 434
>AT1G35850.1 | Symbols: APUM17, PUM17 | pumilio 17 |
chr1:13330510-13331506 FORWARD LENGTH=304
Length = 304
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Query: 243 DQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQKV 302
D+ ++V + + +D + + + L+ YGC + +++ DP + ++
Sbjct: 100 DKYASYVAIQGMRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIKELDDPYYRDEL 159
Query: 303 MDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQKFASNVVEKC 362
MD + +L+ D YGN+VVQHVL+ I +L G V++S +K+ S +VE+
Sbjct: 160 MDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERL 219
Query: 363 LAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDD-HQRELILSRIK 421
L +++ + T E L + + + N+VV K+LE +D +L S +
Sbjct: 220 LEVRDIPMATIVLDLLACKT---EMLIRLARSENGNFVVCKLLELTNDILTADLFYSLV- 275
Query: 422 VHLNALKKYTYGKH 435
N L+ Y + H
Sbjct: 276 ---NKLRPYRFLLH 286
>AT5G09610.1 | Symbols: APUM21, PUM21 | pumilio 21 |
chr5:2981156-2982709 FORWARD LENGTH=517
Length = 517
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 10/210 (4%)
Query: 233 LDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEH 292
+D N + D+ G +I I V + + + ++ + L+ GC + VL+
Sbjct: 294 VDTNFFLLMSDKYGRGLIIPAIRAVDKTKKESLYKLTYEYTLHLARLETGCLALNNVLQE 353
Query: 293 CKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQ 352
+ + + + + L+ D YG +VVQ++L P +AI + L G+ +++ +
Sbjct: 354 IRGI-YRDLIFECVANNADWLSFDPYGTHVVQNILILQNPVATTAIAERLRGSFFRLAME 412
Query: 353 KFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQ 412
+ S VVEKCL R ++ E G+ E M D+F N+VVQ L + +
Sbjct: 413 RQGSYVVEKCLK--SDFARDQVLEEFRGNAKE---WVRMTTDKFGNFVVQSALRVMKEKE 467
Query: 413 RELILSRIKVHLNALKKYTYGKHIVARAEN 442
+L L + +GK + R N
Sbjct: 468 MRPLLREFVEKL----RPHFGKMEIGRGRN 493
>AT5G60110.1 | Symbols: APUM18, PUM18 | pumilio 18 |
chr5:24201954-24202937 FORWARD LENGTH=327
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 9/215 (4%)
Query: 122 LSEISGHVVEFSADQYGSRFIQQKLETATTEEKTMVYQEIMPHALALMTDVFGNYVVQKF 181
L+ S + + ++GSR +Q KL + + I+ L + TD + +YV +
Sbjct: 77 LTSDSDYFMSIVTTKFGSRRVQ-KLLGKSDDVDAFFCAAILRRFLHITTDKYASYVTIRA 135
Query: 182 FEHGLASQRRELANKLFSHVLTLSLQMYGCRVIQKAIEVVD----LDQKIKMVQELDGNI 237
++ L ++ H L L+ +GC + I D DQ +++V N
Sbjct: 136 MVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVAS---NA 192
Query: 238 MRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPN 297
+R D +GN V+Q + I I + Q + LS YG +++++LE +
Sbjct: 193 LRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMV 252
Query: 298 TQQKVMDEILGAVSM-LAQDQYGNYVVQHVLEHGK 331
+ G M LA++++GN+VV L K
Sbjct: 253 VVVVELLGCDGDRLMRLARNEFGNFVVVKALRFTK 287
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 168 LMTDVFGNYVVQKFFEHGLASQRRELANKLFS---HVLTLSLQMYGCRVIQKAIEVVDLD 224
LMTD G ++ + ++ + +A+ L S + +++ +G R +QK + D D
Sbjct: 48 LMTDGDGVSYFKEMISNSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD-D 106
Query: 225 QKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCR 284
+ + D+ ++V + + + + + L+ +GC
Sbjct: 107 VDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCI 166
Query: 285 VIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTG 344
+ ++ DP + ++++ + L+ D GN+VVQHVL I L G
Sbjct: 167 ALNDIITDADDPYYRDQLLELVASNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYG 226
Query: 345 NIVQMSQQKFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKV 404
+++S +K+ S +VEK L E +V + + + L + +++F N+VV K
Sbjct: 227 QCIELSFKKYGSYIVEKLLE----VEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKA 282
Query: 405 LE 406
L
Sbjct: 283 LR 284
>AT1G21620.1 | Symbols: APUM20, PUM20 | pumilio 20 |
chr1:7579129-7580171 FORWARD LENGTH=308
Length = 308
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 90/195 (46%), Gaps = 36/195 (18%)
Query: 81 SGMRNVAGVMGPWHLDTGNMDESFASSLLEEFKSNKTKCFELSEISGHVVEFSADQYGSR 140
+G + + ++G T ++D FA+++L F H++ D+Y S
Sbjct: 102 NGSKRIQKLLG----KTDDVDALFAAAILRRFL--------------HII---TDKYASY 140
Query: 141 FIQQKLETATTEEKTMVYQEIM---------PHALALMTDVFGNYVVQKFFEHGLASQRR 191
+++ + ++K +Y+ I+ HAL L D +GN+V+Q+ + +
Sbjct: 141 VVRRGMTVFDKKKKKAMYEHILHYASHIARDKHALVLSNDAYGNFVIQRVLKLNDLRSKN 200
Query: 192 ELANKLFSHVLTLSLQMYGCRVIQKAIEVVDLDQKIKMVQEL---DGN-IMRCVRDQNGN 247
+ L H + LS Q YG V+ +E + + +V+EL +G+ +MR R++ GN
Sbjct: 201 NIVVSLRGHFVDLSFQKYGSYVVDVLLETK--ESMVVVVEELMECEGDMLMRLARNEYGN 258
Query: 248 HVIQKCIECVPEDAI 262
++ K + ++ +
Sbjct: 259 FLVCKALRVTQKEMV 273
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 101/213 (47%), Gaps = 25/213 (11%)
Query: 242 RDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCRVIQRVLEHCKDPNTQQK 301
R+ NG+ IQK + +D + + + + T Y V++R + D ++
Sbjct: 99 RNMNGSKRIQKLLGKT-DDVDALFAAAILRRFLHIITDKYASYVVRRGMT-VFDKKKKKA 156
Query: 302 VMDEILGAVSMLAQDQ---------YGNYVVQHVLEHGKPHERSAIIKELTGNIVQMSQQ 352
+ + IL S +A+D+ YGN+V+Q VL+ ++ I+ L G+ V +S Q
Sbjct: 157 MYEHILHYASHIARDKHALVLSNDAYGNFVIQRVLKLNDLRSKNNIVVSLRGHFVDLSFQ 216
Query: 353 KFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDHQ 412
K+ S VV+ L E +V E L E + L + ++++ N++V K L Q
Sbjct: 217 KYGSYVVDVLLE---TKESMVVVVEELMEC-EGDMLMRLARNEYGNFLVCKALRVT---Q 269
Query: 413 RELILSRI---KVH----LNALKKYTYGKHIVA 438
+E++ + + VH + L +++ GK+I +
Sbjct: 270 KEMVRTDLFWGLVHKLKPFHNLLRWSRGKNIAS 302
>AT5G60180.1 | Symbols: APUM19, PUM19 | pumilio 19 |
chr5:24233024-24234007 REVERSE LENGTH=327
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 107/252 (42%), Gaps = 8/252 (3%)
Query: 168 LMTDVFGNYVVQKFFEHGLASQRRELANKLFS---HVLTLSLQMYGCRVIQKAIEVVDLD 224
LMTD G ++ ++ + +A+ L S + +++ +G R +QK + D D
Sbjct: 48 LMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSD-D 106
Query: 225 QKIKMVQELDGNIMRCVRDQNGNHVIQKCIECVPEDAIDFIVSTFFDQVVTLSTHPYGCR 284
+ + D+ ++V + + + + + L+ +GC
Sbjct: 107 VDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCI 166
Query: 285 VIQRVLEHCKDPNTQQKVMDEILGAVSMLAQDQYGNYVVQHVLEHGKPHERSAIIKELTG 344
+ ++ DP + ++++ ++ L+ D GN+VVQHVL I L G
Sbjct: 167 ALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYG 226
Query: 345 NIVQMSQQKFASNVVEKCLAFGGPAERQFLVNEMLGSTDENEPLQAMMKDQFANYVVQKV 404
+++S +K+ S +VEK L E +V + + + L + +++F N+VV K
Sbjct: 227 QCIELSFKKYGSYIVEKLLE----VEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKA 282
Query: 405 LETCDDHQRELI 416
L + + +L
Sbjct: 283 LRFTKEMRMDLF 294