Miyakogusa Predicted Gene
- Lj0g3v0254159.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0254159.1 Non Chatacterized Hit- tr|I3SXJ5|I3SXJ5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,76.24,0,SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL; Mitochondrial termination
factor repeats,Mitochodri,CUFF.16675.1
(387 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07900.1 | Symbols: | Mitochondrial transcription terminatio... 205 5e-53
AT1G21150.1 | Symbols: | Mitochondrial transcription terminatio... 153 2e-37
AT1G61980.1 | Symbols: | Mitochondrial transcription terminatio... 146 3e-35
AT1G61970.2 | Symbols: | Mitochondrial transcription terminatio... 144 9e-35
AT1G61970.1 | Symbols: | Mitochondrial transcription terminatio... 144 9e-35
AT1G62120.1 | Symbols: | Mitochondrial transcription terminatio... 139 4e-33
AT1G61990.1 | Symbols: | Mitochondrial transcription terminatio... 129 5e-30
AT3G46950.1 | Symbols: | Mitochondrial transcription terminatio... 127 1e-29
AT1G62085.1 | Symbols: | Mitochondrial transcription terminatio... 119 2e-27
AT1G62150.1 | Symbols: | Mitochondrial transcription terminatio... 106 2e-23
AT5G64950.1 | Symbols: | Mitochondrial transcription terminatio... 101 7e-22
AT1G62110.1 | Symbols: | Mitochondrial transcription terminatio... 100 1e-21
AT1G61960.1 | Symbols: | Mitochondrial transcription terminatio... 99 6e-21
AT1G62010.1 | Symbols: | Mitochondrial transcription terminatio... 91 9e-19
AT1G56380.1 | Symbols: | Mitochondrial transcription terminatio... 89 5e-18
AT1G56380.2 | Symbols: | Mitochondrial transcription terminatio... 89 5e-18
AT5G23930.1 | Symbols: | Mitochondrial transcription terminatio... 80 2e-15
AT1G62490.1 | Symbols: | Mitochondrial transcription terminatio... 67 2e-11
AT1G79220.1 | Symbols: | Mitochondrial transcription terminatio... 52 6e-07
AT4G14605.1 | Symbols: | Mitochondrial transcription terminatio... 50 3e-06
>AT5G07900.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2520188-2521405 FORWARD
LENGTH=405
Length = 405
Score = 205 bits (521), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 200/342 (58%), Gaps = 14/342 (4%)
Query: 55 DSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNII 114
+ K SFT++Y ++CG SP +A A++++ D+ E+P++V+ +HGF+ +Q +++
Sbjct: 63 EQQQKLSFTLNYLIDSCGLSPDSATVASRKLLLDSPERPNTVLNLLRDHGFTTAQISSLV 122
Query: 115 RRVPELLLLDSTKRVLPKFQFIASKGFD---IVTTVTRYPYFLLKSLENHIIPAFEFVRR 171
++ P LLL ++ +LPK F S G + T+ P L +SL N +IP++ F++
Sbjct: 123 KKRPVLLLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKS 182
Query: 172 FSPSDEKALACALFGST-----SYTIALMKSKVQLLLDMGVPPSNIYILLRTRPSMLGCA 226
SDEK +A AL +T +T L+ + + + + GVP I +LL P +
Sbjct: 183 VLDSDEKIVA-ALRRTTWVFLEDHTKNLVPN-INYMAETGVPEKCIKLLLTHFPEAVMQK 240
Query: 227 N--MKEAVEEVKGLGFHPSKTHFVAALQAKSSI-PKSLWDAKLDAFKTWGWSEDVVLDAF 283
N + ++ + +GF+P K+ FV A+ A S KS+WD + ++ WGWSED ++ AF
Sbjct: 241 NHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAF 300
Query: 284 RRDPHIMLNSIKKVNAVMNFWVGHLGWDPSVLLAAPCLFGYSLEKRLMPRALVVQYLLSR 343
++ PH M+ S +K+N M ++V + P + P + +SLEKR++PR V + L+S
Sbjct: 301 KKHPHCMMLSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSN 360
Query: 344 GLMKKNASLSSPFMYTDKLFLQKFVECFEEEETSKLLSLYRG 385
GL+K++ SL+S + +K+FL+K V + EEE +L++LY G
Sbjct: 361 GLVKEDWSLTSLLVPVEKVFLEKLVIKY-EEELPELMNLYLG 401
>AT1G21150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:7406406-7407578 REVERSE
LENGTH=390
Length = 390
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 167/324 (51%), Gaps = 9/324 (2%)
Query: 60 QSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNIIRRVPE 119
+SFTVSY ++CG S ++A ++ V+ +++KPDSV+A F +HGF+ Q ++I+ P
Sbjct: 55 ESFTVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPR 114
Query: 120 LLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVRRFSPSD 176
+L L + PK F +S GF D ++ P L SL +IP ++ ++ +
Sbjct: 115 VLSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEE 174
Query: 177 EKALACALFGSTSYTIAL---MKSKVQLLLDMGVPPSNIYILLRTRPSMLGCANMK--EA 231
E + C G +++ + + +V + ++GVP +I L++ P + E
Sbjct: 175 ESVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEV 234
Query: 232 VEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFRRDPHIML 291
+ V GF P K FV A+ A +S + K F+ +GWS++ + A R P+ +
Sbjct: 235 LNRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVT 294
Query: 292 NSIKKVNAVMNFWVGHLGWDPSVLLAAPCLFGYSLEKRLMPRALVVQYLLSRGLMKK-NA 350
S +K+ + + V ++G ++A P + S+EKR+ PR V+ LLS+GL+KK +
Sbjct: 295 VSDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDI 354
Query: 351 SLSSPFMYTDKLFLQKFVECFEEE 374
+ + F+ KFV +++E
Sbjct: 355 NYFTILKLKSSEFMDKFVLKYQDE 378
>AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908162-22909418 FORWARD
LENGTH=418
Length = 418
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 184/371 (49%), Gaps = 49/371 (13%)
Query: 60 QSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNIIRRVPE 119
+SFTVSY ++ G + A +++V F+ + PDSV+ +HGF+ SQ I+ P+
Sbjct: 51 KSFTVSYLVDSLGLPKKLAESVSRKVSFEDKDNPDSVLNLLRSHGFTDSQISTIVTDYPQ 110
Query: 120 LLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVRR--FSP 174
LL+ D+ K + PK QF+ S+G ++ V+ P L K I ++F++
Sbjct: 111 LLVADAEKSLAPKLQFLQSRGASSSELTEIVSTVPKILGKRGHKTISVFYDFIKETLLDK 170
Query: 175 SDEKALACALF--GSTSYTIALMKSKVQLLLDMGVPPSNIY-ILLRTRPSMLGCANMKEA 231
S + +C F G+ I + +L ++G+P ++ +L+ + G +E+
Sbjct: 171 SSKSEKSCQPFPQGNLENKI----RNLSVLRELGMPHKLLFPLLISCDVPVFGKEKFEES 226
Query: 232 VEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFRRDPHIML 291
+++V +GF PS + FV AL + + K++A+K G+ + V F+R P+ +
Sbjct: 227 LKKVVEMGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWPNFLT 286
Query: 292 NSIKKV-NAV----------------------------------MNFWVGHLGWDPSVLL 316
+S KK+ N + F V + W L+
Sbjct: 287 HSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPLKALV 346
Query: 317 AAPCLFGYSLEKRLMPRALVVQYLLSRGLMKKN-ASLSSPFMYTDKLFLQKFVECFEEEE 375
+ P + GYSLEKR +PR VVQ L+S+GL+ S+S F+ TD++FL ++V+ E+++
Sbjct: 347 SNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRHEDKQ 406
Query: 376 -TSKLLSLYRG 385
++L+++YR
Sbjct: 407 LETELMAIYRA 417
>AT1G61970.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 183/372 (49%), Gaps = 51/372 (13%)
Query: 60 QSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNIIRRVPE 119
+FTVSY ++ G + + A +++V F+ PDSV+ T+HGF+ SQ IIR P+
Sbjct: 51 NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110
Query: 120 LLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVR----RF 172
LL+ D+ K + PK QF+ S+G +I V+ P L K I ++F++
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170
Query: 173 SPSDEKALACALFGSTSYTIALMKSKVQLLLDMGVPPSNIY-ILLRTRPSMLGCANMKEA 231
S +EK G+ I V +L ++G+P ++ +L+ + G +E
Sbjct: 171 SSKNEKLCHSLPQGNLENKI----RNVSVLRELGMPHKLLFSLLISDSQPVCGKEKFEET 226
Query: 232 VEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGW----------------- 274
+++V +GF P+ + FV ALQ + + + K+ +K+ G+
Sbjct: 227 LKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLR 286
Query: 275 -SEDVVLDA--------FRRD----------PHIMLNSIKKVNAVMNFWVGHLGWDPSVL 315
SE +LD+ F RD P I L S + V F V + W +
Sbjct: 287 VSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGL-STETVKKKTEFLVKKMNWPLKAV 345
Query: 316 LAAPCLFGYSLEKRLMPRALVVQYLLSRGLMKKNA-SLSSPFMYTDKLFLQKFV-ECFEE 373
++ P +FGYSLEKR++PR V++ L+S+GLM+ S+S M T ++FL ++V ++
Sbjct: 346 VSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDK 405
Query: 374 EETSKLLSLYRG 385
+ ++L+++YR
Sbjct: 406 QLVTELMAIYRA 417
>AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 183/372 (49%), Gaps = 51/372 (13%)
Query: 60 QSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNIIRRVPE 119
+FTVSY ++ G + + A +++V F+ PDSV+ T+HGF+ SQ IIR P+
Sbjct: 51 NNFTVSYLVDSLGLTTKLAESISRKVSFEDKNNPDSVLNLLTSHGFTGSQISTIIRDYPQ 110
Query: 120 LLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVR----RF 172
LL+ D+ K + PK QF+ S+G +I V+ P L K I ++F++
Sbjct: 111 LLIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEK 170
Query: 173 SPSDEKALACALFGSTSYTIALMKSKVQLLLDMGVPPSNIY-ILLRTRPSMLGCANMKEA 231
S +EK G+ I V +L ++G+P ++ +L+ + G +E
Sbjct: 171 SSKNEKLCHSLPQGNLENKI----RNVSVLRELGMPHKLLFSLLISDSQPVCGKEKFEET 226
Query: 232 VEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGW----------------- 274
+++V +GF P+ + FV ALQ + + + K+ +K+ G+
Sbjct: 227 LKKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLR 286
Query: 275 -SEDVVLDA--------FRRD----------PHIMLNSIKKVNAVMNFWVGHLGWDPSVL 315
SE +LD+ F RD P I L S + V F V + W +
Sbjct: 287 VSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGL-STETVKKKTEFLVKKMNWPLKAV 345
Query: 316 LAAPCLFGYSLEKRLMPRALVVQYLLSRGLMKKNA-SLSSPFMYTDKLFLQKFV-ECFEE 373
++ P +FGYSLEKR++PR V++ L+S+GLM+ S+S M T ++FL ++V ++
Sbjct: 346 VSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDK 405
Query: 374 EETSKLLSLYRG 385
+ ++L+++YR
Sbjct: 406 QLVTELMAIYRA 417
>AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960326-22961639 REVERSE
LENGTH=437
Length = 437
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 183/378 (48%), Gaps = 45/378 (11%)
Query: 52 TTSDSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTH 111
++ D +FTVSY ++ G + + A + +V FD PDSV++ +HGF+ SQ
Sbjct: 47 SSRDGRKGHNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVLSLLRSHGFTDSQIS 106
Query: 112 NIIRRVPELLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEF 168
NIIR P LL+LD+ K + PK QF+ S G ++ TV+ P L K + ++F
Sbjct: 107 NIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKILGKRKGKSLSRYYDF 166
Query: 169 VRRFSPSDEKALACALFGSTSYTIALMKSKVQLLL---DMGVPPSNIY-ILLRTRPSMLG 224
V+ +D+ + L S + ++K++ LL +MGVP ++ +L+ + G
Sbjct: 167 VKVIIEADKSSKLEKLCHSLPEG-SKQENKIRNLLVLREMGVPQRLLFSLLISDAGDVCG 225
Query: 225 CANMKEAVEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFR 284
KE++++ +GF P+ FV AL + + K +A K G + D V F+
Sbjct: 226 KEKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFNACKRLGLAVDDVWAMFK 285
Query: 285 RDPHIMLNSIKKV-NAV----------------------------------MNFWVGHLG 309
+ P+I+ S KK+ N+V F V +
Sbjct: 286 KWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGYSTELMKTKTEFLVTEMN 345
Query: 310 WDPSVLLAAPCLFGYSLEKRLMPRALVVQYLLSRGLMKKNA-SLSSPFMYTDKLFLQKFV 368
W + + P + GYSLEKR +PR V++ L+S+GL++ +SS T ++FL +V
Sbjct: 346 WPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTSTSEVFLYMYV 405
Query: 369 ECFEEEE-TSKLLSLYRG 385
++++ ++L++++ G
Sbjct: 406 RKHDDKQLVAELMAIFTG 423
>AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911453-22912697 FORWARD
LENGTH=414
Length = 414
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 170/359 (47%), Gaps = 55/359 (15%)
Query: 55 DSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNII 114
D ++FTVSY ++ G S + A +++V F+ PDSV++ F ++GF+ SQ II
Sbjct: 46 DGRKGKNFTVSYLVDSLGLSKKLAESISRKVSFEDKVNPDSVLSLFRSYGFTDSQISTII 105
Query: 115 RRVPELLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVRR 171
P LL+ D+ K + K Q + S+G +I V+ P L K I ++ V+
Sbjct: 106 TDYPLLLVADAKKALGRKLQILQSRGASSSEITEIVSTVPRILGK---KSITVYYDAVKD 162
Query: 172 FSPSDEKALACALFGSTSYTIALMKSKVQLLLDMGVPPSNIYILLRTRPS-MLGCANMKE 230
+D + GS I V L ++G+P + LL ++ + G N
Sbjct: 163 IIVADTSSSYELPQGSQGNKI----RNVSALRELGMPSRLLLPLLVSKSQPVCGKENFDA 218
Query: 231 AVEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFRRDPHIM 290
++++V +GF P+ T FV AL+ + + + K+ F++ G++ D V + F++ P ++
Sbjct: 219 SLKKVVEMGFDPTTTKFVLALRMLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVL 278
Query: 291 --------------------------------------LNSIKKVNAVMNFWVGHLGWDP 312
+ S+KK N F V + W
Sbjct: 279 KVSKKKILKSAETFLDLGYSRAEFLMMVKRYPPCIEYSVESVKKKN---EFLVKKMKWPR 335
Query: 313 SVLLAAPCLFGYSLEKRLMPRALVVQYLLSRGLMKKNASL---SSPFMYTDKLFLQKFV 368
+ L+ P +FGYS+EKR++PR +++ LLS+GL++K + L SS TD+ FL ++V
Sbjct: 336 NALVLHPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYV 394
>AT3G46950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:17289452-17290804 FORWARD
LENGTH=450
Length = 450
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 180/398 (45%), Gaps = 84/398 (21%)
Query: 50 FSTT--SDSSDKQS-FTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFS 106
FS+T DSS K S FTVSY + G + + A +K+V F+ PDSV+ ++GF
Sbjct: 38 FSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNPDSVLNLLRSNGFK 97
Query: 107 ISQTHNIIRRVPELLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHII 163
SQ IIR P LL+ D+ K + PK QF+ S+G +++ V+ P L K E +
Sbjct: 98 DSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILDKKGEESVS 157
Query: 164 PAFEFVRRFSPSDEKALACAL-FGSTSYTIALMKSKVQLLLDMGVPPSNIYILLRTR-PS 221
++FV+ D K+L + G I + +L ++GVP ++ LL +R
Sbjct: 158 LYYDFVKDIM-QDGKSLCISCPEGKKGNRI----RNISVLRELGVPQKLLFSLLISRYQP 212
Query: 222 MLGCANMKEAVEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDA------------- 268
+ G +E++++V +GF P+K+ FV AL + + + K++
Sbjct: 213 VCGKEKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWA 272
Query: 269 -FKTW---------------------GWSEDVVLDAFRRDPHIMLNSIKKVNAVMNFWVG 306
FK W G E+ ++ + P + +S +K+ + ++G
Sbjct: 273 IFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSSEQKILDSIEMFLG 332
Query: 307 -----------------------------------HLGWDPSVLLAAPCLFGYSLEKRLM 331
+ W ++ P + GYSLEKR++
Sbjct: 333 LGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIV 392
Query: 332 PRALVVQYLLSRGLM-KKNASLSSPFMYTDKLFLQKFV 368
PR+ V++ L+S+GL+ +N +SS + TD+ FL+++V
Sbjct: 393 PRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYV 430
>AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=461
Length = 461
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 189/404 (46%), Gaps = 80/404 (19%)
Query: 61 SFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNIIRRVPEL 120
SF+VSY ++ G + A +K+V F+ PDSV++ +HGF+ SQ +II P+L
Sbjct: 55 SFSVSYLVDSLGLPKKVAESISKKVSFEDKGNPDSVLSLLRSHGFTDSQISSIITDYPQL 114
Query: 121 LLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVRRFSPSDE 177
L+ D+ K + PK QF+ S+G ++ V+ P L K + I ++FV+ +D+
Sbjct: 115 LVADAEKSIGPKLQFLQSRGASRSELTHIVSTVPEILGKRGDKTISIYYDFVKEIIEADK 174
Query: 178 KA---LACALFGSTSYTIALMKSKVQLLLDMGVPPSNIY-ILLRTRPSMLGCANMKEAVE 233
+ C S +++ V +L ++GVP ++ +L+ + G N +E+++
Sbjct: 175 SSKFEKLCHSLPEGSKQENKIRN-VLVLRELGVPQRLLFPLLISDHQPVCGKENFEESLK 233
Query: 234 EVKGLGFHPSKTHFVAAL-----------QAKSSIPKSLWDAKLDAF------------- 269
+V +GF P+ + FV AL +AK ++ KSL + D +
Sbjct: 234 KVVEMGFDPTTSKFVKALRVVYRFRDKTIEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFS 293
Query: 270 -----KTW------GWSEDVVLDAFRRDPHIMLNSIKKV-NAVMNF-------------- 303
+TW G ED VL ++ P + S +K+ N++ F
Sbjct: 294 ENKIVQTWETLKKCGLLEDDVLSVLKKFPQCINASEQKIMNSIETFLGLGFSRDEVAMIA 353
Query: 304 --------------------WVGHLGWDPSVLLAAPCLFGYSLEKRLMPRALVVQYLLSR 343
V + W +++ P + GYSLEKR +PR V++ L+S+
Sbjct: 354 KRFPQCLILSAETVKKKTEFLVKKMNWPLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSK 413
Query: 344 G-LMKKNASLSSPFMYTDKLFLQKFVECFEEEE-TSKLLSLYRG 385
G L + +SS + T++ FL ++V+ ++++ +L++++ G
Sbjct: 414 GSLGSELPGMSSVLVCTNEEFLCRYVKNHDDKKIVPELMAIFTG 457
>AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970198-22971589 REVERSE
LENGTH=463
Length = 463
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 173/411 (42%), Gaps = 87/411 (21%)
Query: 55 DSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNII 114
DS +FTVSY ++ G + + A + +V F+ PD+V+ +H F+ SQ +II
Sbjct: 52 DSRKGNNFTVSYLVDSLGLASKLAESISMKVSFENKGNPDTVLNLLRSHEFTDSQISSII 111
Query: 115 RRVPELLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVRR 171
P LL+ D+ + PK + S+G ++ V++ P L + I ++ V+
Sbjct: 112 SDYPTLLVADAENSLGPKLLLMQSRGASSSELTEIVSKVPKILGMKGDKSIGRYYDIVKE 171
Query: 172 FSPSDEKA---LACALFGSTSYTIALMKSKVQLLLDMGVPPSNIYILLRTRPSM-LGCAN 227
+D+ + C S +++ V +L D+GVP ++ LL + + G
Sbjct: 172 IIEADKSSKFEKLCHSLPEGSKQENKIRN-VLVLRDLGVPQRLLFSLLFSNHHVCCGKEK 230
Query: 228 MKEAVEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKL--------------------- 266
+E++ +V G+GF P+ FV AL I L D +L
Sbjct: 231 FEESLNKVVGMGFDPTTPKFVEAL----CIVYGLSDKRLEENFNVYKRFGLTVNDVWELF 286
Query: 267 ------------------DAFKTWGWSEDVVLDAFRRDP-------HIMLNSIKK----- 296
+A K G ED VL F+++P +LNS++
Sbjct: 287 KKCPAFLGYSENRIIQTFEALKRCGLCEDEVLSVFKKNPLCLRASEQQILNSMETFIGLG 346
Query: 297 -----------------------VNAVMNFWVGHLGWDPSVLLAAPCLFGYSLEKRLMPR 333
V F V + W V+ P + GYS+EKR +PR
Sbjct: 347 FSRDEFVMMVKCLPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQVLGYSMEKRTVPR 406
Query: 334 ALVVQYLLSRGLMKKNA-SLSSPFMYTDKLFLQKFVECFEEEETSKLLSLY 383
V++ L+S+GL+ ++S TD+ FL+++V +E+ +L+S++
Sbjct: 407 CNVIKALMSKGLLGSELPPMASVLACTDQTFLKRYVVEHDEKLVLELMSIF 457
>AT5G64950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:25953887-25955062 FORWARD
LENGTH=391
Length = 391
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 151/337 (44%), Gaps = 17/337 (5%)
Query: 67 FTNTCGFSPQAALKAAKRV-RFDTAEKPDSVIAFFTNHGFSISQTHNIIRRVPELLLLDS 125
F GF A+ A R + E+P SVI ++ FS +Q IR P ++ +
Sbjct: 44 FLRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNV 103
Query: 126 TKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVRRFSPSDEKAL-- 180
K + PK +F GF + V++ + SL +IP E ++ + L
Sbjct: 104 EKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTVEILKSIVAPKHEDLPV 163
Query: 181 ---ACA-LFGSTSYTIALMKSKVQLLLDMGVPPSNIYILLRTRPSMLGCAN--MKEAVEE 234
C L S + L+ + + L G+ S + LLR +P + + ++ V
Sbjct: 164 ILSRCGWLLLSRDPNLFLLPN-ISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSR 222
Query: 235 VKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFRRDPHIMLNSI 294
LGF + V A+ + SS+ + +D K+ F G+SED + D RR P ++ S
Sbjct: 223 ALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSE 282
Query: 295 KKVNAVMNFWVGHLGWDPSVLLAAPCLFGYSLEKRLMPRALVVQYL----LSRGLMKKNA 350
K+ F++ +G + L PC+ Y+LEKR++PR V+Q L L KK
Sbjct: 283 DKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKK 342
Query: 351 SLSSPFMYTDKLFLQKFVECFEEEETSKLLSLYRGGC 387
++ T++ FL+K+V F +E +LL Y+ C
Sbjct: 343 NMVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYKCVC 379
>AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22958094-22959482 REVERSE
LENGTH=462
Length = 462
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 133/257 (51%), Gaps = 8/257 (3%)
Query: 52 TTSDSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTH 111
++ D ++FTVSY ++ G + + A +K+V F PD V++ F ++GF+ SQ
Sbjct: 43 SSRDGRKVKNFTVSYLVDSLGLATKLAESISKKVSFVNKGNPDLVLSLFRSYGFTNSQIS 102
Query: 112 NIIRRVPELLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEF 168
+II P LLL+D+ K + K QF+ S+G ++ V+ P L + ++F
Sbjct: 103 SIITDYPRLLLIDAEKSLDIKLQFLESRGASSPELTQIVSTVPKILGMKEGKSLGRYYDF 162
Query: 169 VRRFSPSDEKA---LACALFGSTSYTIALMKSKVQLLLDMGVPPSNIYILLRTRPS-MLG 224
V+ +D+ + C + +++ V +L D+GVP ++ LL + + G
Sbjct: 163 VKEIIEADKSSKYETLCQPLPEANRQGNKIRN-VSVLRDLGVPQKLLFSLLISDAQPVCG 221
Query: 225 CANMKEAVEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFR 284
N +E++++V +GF P+ + FV AL+A + +++ +K +G++ + V F+
Sbjct: 222 KENFEESLKKVVEMGFDPTTSKFVQALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFK 281
Query: 285 RDPHIMLNSIKKVNAVM 301
+ P+ + +S KK+ +
Sbjct: 282 KCPYFLNSSEKKIGQTI 298
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 108/224 (48%), Gaps = 11/224 (4%)
Query: 172 FSPSDEKALACALFGSTSYTIALMKSKVQLLLDMGVPPSNIYILLRTRPSMLGCANMK-- 229
F P+ K + AL +T ++ +V + G +++ + + P L + K
Sbjct: 237 FDPTTSKFVQ-ALRAVYRFTDKTIEERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIG 295
Query: 230 EAVEEVKGLGFHPSKTHFVAAL--QAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFRRDP 287
+ +E +K G + V Q + + + ++ ++ F G+S D + +R P
Sbjct: 296 QTIETLKKCGLLEDEVISVLKKYPQCIGTSEQKILNS-IEIFLGLGFSRDEFITMVKRFP 354
Query: 288 HIMLNSIKKVNAVMNFWVGHLGWDPSVLLAAPCLFGYSLEKRLMPRALVVQYLLSRGLMK 347
++ S + V + F V + W +++ P + GY+LEKR +PR V++ L+S+ L+
Sbjct: 355 QCLILSAETVKKKIEFVVKKMNWPLKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLG 414
Query: 348 KNAS----LSSPFMYTDKLFLQKFVECFEEEE-TSKLLSLYRGG 386
S +SS + TD+LFL+++V ++E +L+++Y G
Sbjct: 415 DTGSELPPMSSVLVCTDELFLKRYVRNHGDKELVLELMTIYTRG 458
>AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902239-22903612 FORWARD
LENGTH=457
Length = 457
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 9/254 (3%)
Query: 51 STTSDSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQT 110
+T DS +FTVSY ++ G + + A +K+V F+ PDSV++ T++GF+ SQ
Sbjct: 42 ATLIDSLKGNNFTVSYLVDSLGLTTKLAESISKKVSFEERRNPDSVLSLLTSYGFTKSQI 101
Query: 111 HNIIRRVPELLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFE 167
+II P LL LD+ K + PK Q + S+G ++ V+ P L K I ++
Sbjct: 102 SSIITIYPRLLALDAEKSIAPKLQSLQSRGASSSELTQIVSTVPKILGKRGHKSITVYYD 161
Query: 168 FVRRFSPSDEKALACALFGSTSYTIALMKSKVQ---LLLDMGVPPSNIY-ILLRTRPSML 223
FV+ +D+ + L S+ K+K++ +L ++GV ++ +L+ +
Sbjct: 162 FVKDIIEADKSSSYEKL--CHSFPQGNKKNKIRNISVLRELGVAQRLLFPLLISDGQPVC 219
Query: 224 GCANMKEAVEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAF 283
G +E++++V +GF P T FV AL+ + + K++ +K G+ V F
Sbjct: 220 GKERFEESLKKVVEMGFDPETTKFVEALRVIYRMSDKTIEEKVNVYKRLGFGVADVWAIF 279
Query: 284 RRDPHIMLNSIKKV 297
++ P + S KK+
Sbjct: 280 KKWPSFLSYSEKKI 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 3/106 (2%)
Query: 266 LDAFKTWGWSEDVVLDAFRRDPHIMLNSIKKVNAVMNFWVGHLGWDPSVLLAAPCLFGYS 325
++ F G+S D +R P + + + V F V ++ W L++ P +FGYS
Sbjct: 332 IETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNWPLEALVSIPQVFGYS 391
Query: 326 LEKRLMPRALVVQYLLSRGLMKKNAS---LSSPFMYTDKLFLQKFV 368
LEKR +PR V++ L+S+GLMK + +SS TD+ FL+++V
Sbjct: 392 LEKRTVPRCNVIKTLISKGLMKDGSEAPPMSSVLTSTDQAFLRRYV 437
>AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915886-22917133 FORWARD
LENGTH=415
Length = 415
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 156/336 (46%), Gaps = 47/336 (13%)
Query: 94 DSVIAFFTNHGFSISQTHNIIRRVPELLLLDSTKRVLPKFQFIASKGF---DIVTTVTRY 150
DSV+ ++GF+ SQ +IIR +L+ + + K QF+ S+G ++ V+
Sbjct: 71 DSVLDLLRSYGFTDSQISSIIRSDSRVLIDNDATSLGSKLQFLQSRGASSSELTEVVSTV 130
Query: 151 PYFLLKSLENHIIPAFEFVRRFSPSDEKALACALFGSTSYTIALMKS--KVQLLLDMGVP 208
P L K + ++F++ +D+ + + S+++A + +L ++GVP
Sbjct: 131 PKILGKREGKSLSRYYDFIKVIIEADK----SSKYEKISHSLAQGNKIRNILVLRELGVP 186
Query: 209 PSNIYILLRTRPS-MLGCANMKEAVEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLD 267
+ +LL ++ + G ++++V +GF P+ + FV AL + + K+
Sbjct: 187 QKRLLLLLISKSQPVCGKEKFDASLKKVVEMGFDPTTSTFVHALHMLYQMSDKTIEEKIR 246
Query: 268 AFKTWGWSEDVVLDAFRRDPHIMLNSIKKV-NAV-------------------------- 300
+++ G+S D V F++ P + +S KKV N++
Sbjct: 247 VYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVFMMMFKRFPPCIGY 306
Query: 301 --------MNFWVGHLGWDPSVLLAAPCLFGYSLEKRLMPRALVVQYLLSRGLMKKNA-S 351
F V + W + + P + GYSLEKR +PR V++ L+S+GL++
Sbjct: 307 STEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKVLMSKGLLESELPP 366
Query: 352 LSSPFMYTDKLFLQKFVECFEEEE-TSKLLSLYRGG 386
+SS T + FL +V ++++ ++L++++ G
Sbjct: 367 MSSVLTSTSESFLNLYVSKHDDKQLVAELMAIFTGN 402
>AT1G56380.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101374-21102701 FORWARD
LENGTH=388
Length = 388
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 171/380 (45%), Gaps = 56/380 (14%)
Query: 55 DSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNII 114
D+ + TVSY ++ G + A K V P+SV+ ++ F+ SQ +II
Sbjct: 10 DAQKEPKLTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSII 69
Query: 115 RRVPELLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVRR 171
PELL+ D+ + PK +F+ S+ + VTR P L E +I ++FV+
Sbjct: 70 TTDPELLMEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKT 129
Query: 172 FSPSDEKA--------------------------LACALFGSTSYTIAL----MKSKVQL 201
+ + ++ A +F +T L ++ +V +
Sbjct: 130 ITLTSSRSDFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVCTLSNETLEERVNI 189
Query: 202 LLDMGVPPSNIYILLRTRPSMLGCANMK--EAVEEVKGLGFHPSKTHFVAALQAKSSIPK 259
+G +++ + + P+ L + K ++ E +K G + V ++ KS P+
Sbjct: 190 YKTLGFDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEE---VISMFQKS--PQ 244
Query: 260 SLWDAKLDA------FKTWGWSEDVVLDAFRRDPHIMLNSIKKV-NAVMNFWVGHLGWDP 312
+ ++LD K G E+ VL F+R P + S KK+ NAV F D
Sbjct: 245 CIDFSELDITQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDE 304
Query: 313 SVLL-------AAPCLFGYSLEKRLMPRALVVQYLLSRGLMKKN-ASLSSPFMYTDKLFL 364
+++ + P + +S+EK ++PR V++ L S+ L+K +S+ S + D++FL
Sbjct: 305 VMMMVNREGVVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFL 364
Query: 365 QKFVECFEEEE-TSKLLSLY 383
+++V +++E +L+S++
Sbjct: 365 ERYVSKHDDQELVDELMSIF 384
>AT1G56380.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101327-21102701 FORWARD
LENGTH=399
Length = 399
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 171/380 (45%), Gaps = 56/380 (14%)
Query: 55 DSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNII 114
D+ + TVSY ++ G + A K V P+SV+ ++ F+ SQ +II
Sbjct: 21 DAQKEPKLTVSYLVDSVGIPIKFAESILKEVSSKDKCNPNSVLNLLRSYDFTDSQISSII 80
Query: 115 RRVPELLLLDSTKRVLPKFQFIASKGF---DIVTTVTRYPYFLLKSLENHIIPAFEFVRR 171
PELL+ D+ + PK +F+ S+ + VTR P L E +I ++FV+
Sbjct: 81 TTDPELLMEDAENSLCPKLKFLESREILSSRLNDIVTRVPKILRMEEEKSMITYYDFVKT 140
Query: 172 FSPSDEKA--------------------------LACALFGSTSYTIAL----MKSKVQL 201
+ + ++ A +F +T L ++ +V +
Sbjct: 141 ITLTSSRSDFYKVCELYPYIESSIRKVIEMGFDPFAPKIFDATVVVCTLSNETLEERVNI 200
Query: 202 LLDMGVPPSNIYILLRTRPSMLGCANMK--EAVEEVKGLGFHPSKTHFVAALQAKSSIPK 259
+G +++ + + P+ L + K ++ E +K G + V ++ KS P+
Sbjct: 201 YKTLGFDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEE---VISMFQKS--PQ 255
Query: 260 SLWDAKLDA------FKTWGWSEDVVLDAFRRDPHIMLNSIKKV-NAVMNFWVGHLGWDP 312
+ ++LD K G E+ VL F+R P + S KK+ NAV F D
Sbjct: 256 CIDFSELDITQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETFLGQGFSKDE 315
Query: 313 SVLL-------AAPCLFGYSLEKRLMPRALVVQYLLSRGLMKKN-ASLSSPFMYTDKLFL 364
+++ + P + +S+EK ++PR V++ L S+ L+K +S+ S + D++FL
Sbjct: 316 VMMMVNREGVVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSVLICPDEVFL 375
Query: 365 QKFVECFEEEE-TSKLLSLY 383
+++V +++E +L+S++
Sbjct: 376 ERYVSKHDDQELVDELMSIF 395
>AT5G23930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:8074625-8075998 REVERSE
LENGTH=457
Length = 457
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 117/263 (44%), Gaps = 9/263 (3%)
Query: 29 LLLPHQKPFFPCPLSIVSHNLFSTTSDSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFD 88
LLL + F S+V+ + D +++FTVSY ++ G + + A + + FD
Sbjct: 23 LLLQNSSAFTESFSSVVTTTKDLSLEDERKRKTFTVSYLIDSLGLTTKLAESISMKANFD 82
Query: 89 TAEKPDSVIAFFTNHGFSISQTHNIIRRVPELLLLDSTKRVLPKFQFIASKGF---DIVT 145
PDSV+ ++GF SQ +II P L+ + K + K F+ G ++
Sbjct: 83 EKGNPDSVLKLLRSYGFKDSQISSIISTYPRFLIENPEKTLRAKLHFLKLNGASSSELTE 142
Query: 146 TVTRYPYFLLKSLENHIIPAFEFVRRFSPSDEKALACALFGSTSYTIALMKSKVQLLLDM 205
V++ P L K I +++V+ + + + + T+ V +L +
Sbjct: 143 IVSKVPKILGKRGGKWISHYYDYVKEILQDQDSSSSSSKRKQTNRN-----RNVSVLRKL 197
Query: 206 GVPPSNIYILLRTRPS-MLGCANMKEAVEEVKGLGFHPSKTHFVAALQAKSSIPKSLWDA 264
GVP + LL +R + G +E+V+++ +GF P FV AL + +
Sbjct: 198 GVPQRLLLNLLISRAKPVCGKERFEESVKKIVEMGFDPKSPKFVNALYVFYELSDKTIEE 257
Query: 265 KLDAFKTWGWSEDVVLDAFRRDP 287
K++A+ G S + V F++ P
Sbjct: 258 KVNAYIRLGLSVNEVWAVFKKWP 280
>AT1G62490.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:23130405-23131533 REVERSE
LENGTH=334
Length = 334
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 111/248 (44%), Gaps = 38/248 (15%)
Query: 55 DSSDKQSFTVSYFTNTCGFSPQAALKAAKRVRFDTAEKPDSVIAFFTNHGFSISQTHNII 114
DS ++FTVSY ++ G + A +K+ RF+ PDSV++ +HGF++SQ
Sbjct: 92 DSQKGKNFTVSYLVDSLGLPKKLAESISKKFRFEDKANPDSVLSLLRSHGFTVSQIS--- 148
Query: 115 RRVPELLLLDSTKRVLPKFQFIASKGFDIVTTVTRYPYFLLKSLENHIIPAFEFVRRFSP 174
+P+LL +G T++ Y F+ +SLE +E +
Sbjct: 149 --IPKLL---------------GKRGH---KTLSLYYDFVKESLEADKSSKYETL----- 183
Query: 175 SDEKALACALFGSTSYTIALMKSKVQLLLDMGVPPSNIY-ILLRTRPSMLGCANMKEAVE 233
C F + + K V +L ++G+P ++ +L+ + G +++
Sbjct: 184 -------CQSFPQGN--LENKKRNVSVLRELGMPHKLLFPLLISVGQPVCGKDRFNTSLK 234
Query: 234 EVKGLGFHPSKTHFVAALQAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFRRDPHIMLNS 293
+V +GF P+ FV AL + + K++ +K G++ + V F++ P+ + S
Sbjct: 235 KVVEMGFDPTTAKFVKALHVSYEMNDKTIEEKVNVYKMLGFAVEDVWVIFKKWPYSLKYS 294
Query: 294 IKKVNAVM 301
+K+ +
Sbjct: 295 EEKITQTI 302
>AT1G79220.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:29799227-29800426 FORWARD
LENGTH=399
Length = 399
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 92/194 (47%), Gaps = 7/194 (3%)
Query: 195 MKSKVQLLLDMGVPPSNIYILLRTRPSMLGCANMK-EAVEEVKGLGFHPSKTHF--VAAL 251
+K ++ +G ++ +L +RP+++ N E E ++ G F VA +
Sbjct: 185 IKPAIEYYKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAVI 244
Query: 252 QAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFRRDPHIMLNSIKKVNAVMNFWVGHLGWD 311
S + + K+ + +G+SE+ + + + P ++ S++KV M F + +
Sbjct: 245 IGVSRM--ETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLP 302
Query: 312 PSVLLAAPCLFGYSLEKRLMPRALVVQYLLSRGL--MKKNASLSSPFMYTDKLFLQKFVE 369
++ PCL +LE RL PRA +V+ +L L + K S+ ++K FL+ +V
Sbjct: 303 AHSVVKHPCLLLLNLESRLKPRADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVM 362
Query: 370 CFEEEETSKLLSLY 383
C ++ ++L+ Y
Sbjct: 363 CHPQDIATELMEFY 376
>AT4G14605.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr4:8378815-8380564 FORWARD
LENGTH=493
Length = 493
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 10/156 (6%)
Query: 195 MKSKVQLLLDMGVPPSNIYILLRTRPSMLGCA---NMKEAVEEVKGLGFHPSK-THFVAA 250
+K V+ LLD+G+P S+I +L RP + G + N+K + ++ LG ++ ++
Sbjct: 232 IKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISR 291
Query: 251 LQAKSSIPKSLWDAKLDAFKTWGWSEDVVLDAFRRDPHIMLNSIK-KVNAVMNFWVGHLG 309
A + + + ++ G +E+ + R P+IM S++ K+ M ++ L
Sbjct: 292 FPAILTYSRQKLTSTVEFLSQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYF-RSLN 350
Query: 310 WDPSVLL-AAPCLFGYSLEKRLMPRALVVQYLLSRG 344
D +VLL P FG S+E L P V ++ L +G
Sbjct: 351 VDVAVLLHRCPQTFGLSIESNLKP---VTEFFLEKG 383