Miyakogusa Predicted Gene

Lj0g3v0254139.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0254139.1 tr|A9S0E4|A9S0E4_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_72931
,29.58,6e-19,PAP2,Phosphatidic acid phosphatase type 2/haloperoxidase;
SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE,N,CUFF.16674.1
         (224 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G22550.1 | Symbols:  | Phosphatidic acid phosphatase (PAP2) f...    84   5e-17

>AT4G22550.1 | Symbols:  | Phosphatidic acid phosphatase (PAP2)
           family protein | chr4:11878255-11878896 REVERSE
           LENGTH=213
          Length = 213

 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 96/207 (46%), Gaps = 9/207 (4%)

Query: 18  IASFDERISLHIHTLTTPLAPKLHLRLLEHLADFRFFFPVTLSLFFATXXXXXXXXXXXX 77
           I + D  +S  IHT   P  P   L LLE  ADFRF FPV+LS   +             
Sbjct: 13  ILAVDAAVSHAIHTAAKPFLPPFVLLLLEISADFRFSFPVSLSFLLSPPLRSFLVPFLLG 72

Query: 78  XXXXXXXXXXXXXXXXXXXARRSRPAYATNNDYNAVVSLDNFSFPSGHSSRVSFIASIFF 137
                               RR+RPAY  +   +A VS D++SFPSGH+SRV F+A+   
Sbjct: 73  LLFDLIFVGIVKLIF-----RRARPAY-NHPSMSAAVSADHYSFPSGHASRVFFVAASVH 126

Query: 138 LSRAPIAGAIAGPNHPHLVTLVHRWIGGDEXXXXXXXXXXXXXXXXTTVVSRVVLGRHYI 197
              A    ++ GP++  L   +     GD                  T +SR++LGRHY+
Sbjct: 127 FFSAAAEASMTGPSYSFLDGWIRDHNDGDVKVEVVVVVWIWAT---VTAISRILLGRHYV 183

Query: 198 LDVLFGACFGVLEALITLRLLQYRALI 224
           LDV  GA  G++EAL  LR L++  +I
Sbjct: 184 LDVAAGAFLGIVEALFALRFLRFDEMI 210