Miyakogusa Predicted Gene

Lj0g3v0254089.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0254089.1 Non Chatacterized Hit- tr|D7TGI1|D7TGI1_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.43,3e-16,UNCHARACTERIZED,NULL; seg,NULL; SNARE_assoc,SNARE
associated Golgi protein,CUFF.16670.1
         (284 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G12450.1 | Symbols:  | SNARE associated Golgi protein family ...   304   4e-83
AT4G22850.1 | Symbols:  | SNARE associated Golgi protein family ...   294   4e-80
AT4G12000.1 | Symbols:  | SNARE associated Golgi protein family ...   273   8e-74
AT4G22850.2 | Symbols:  | SNARE associated Golgi protein family ...   262   2e-70
AT2G02370.2 | Symbols:  | SNARE associated Golgi protein family ...   204   4e-53
AT2G02370.1 | Symbols:  | SNARE associated Golgi protein family ...   204   4e-53
AT1G03260.1 | Symbols:  | SNARE associated Golgi protein family ...    61   9e-10
AT1G22850.1 | Symbols:  | SNARE associated Golgi protein family ...    53   2e-07

>AT1G12450.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:4244496-4245808 FORWARD LENGTH=303
          Length = 303

 Score =  304 bits (779), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 154/295 (52%), Positives = 199/295 (67%), Gaps = 16/295 (5%)

Query: 4   YEDEGGGRRVEVVCQIEDNNINGDYVKLXXXXXXXXXXXXXXXXXXXI------------ 51
           Y +   G   E+  ++E+++ NGDY+KL                   I            
Sbjct: 3   YSNGVDGTVPELKLRVEEDSDNGDYLKLRGGSNEEDEGSSAESSRCPIGSVTSVWFWVKL 62

Query: 52  ----LFVGSLAVVVIKWVGPYFIDKEVIPIINWETETFSTPVLILLVFVSVALFXXXXXX 107
               + +GSLA V+IKWVGP+ I+KE+IP INW   TFS PVL LL+F SVALF      
Sbjct: 63  ISLVVCLGSLAFVIIKWVGPFLIEKELIPFINWVRNTFSIPVLGLLLFASVALFPSILLP 122

Query: 108 XXXXMWVAGMTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHKIEGWLEKYPKRASVIRSA 167
               MW+AG+TFGYG GFLLI++AA+IGV+LPF IG  F HK++ WL+KYPK+A+++R+A
Sbjct: 123 SSPSMWMAGLTFGYGKGFLLILSAASIGVTLPFLIGHLFLHKMQEWLKKYPKKAAILRAA 182

Query: 168 GGGNWVHQFRAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGIL 227
           G G W HQF+AVTLIR+SPFPYIIYNYCA+AT V YGPYI+GSLVGMVPEIFV+IYTGI+
Sbjct: 183 GEGTWFHQFQAVTLIRVSPFPYIIYNYCALATGVHYGPYILGSLVGMVPEIFVSIYTGIM 242

Query: 228 IRTLADASHEKRSLSAPQIILNVLGFCXXXXXXXXXXXYAKRRLKELQSEDDESL 282
           +RTLA AS  + +LS  +I++NVLGFC           YAK++L  +QSED E+L
Sbjct: 243 LRTLAVASDTRHTLSVVEIVVNVLGFCVTASATIVCTIYAKKKLSAMQSEDVETL 297


>AT4G22850.1 | Symbols:  | SNARE associated Golgi protein family |
           chr4:11994194-11995941 FORWARD LENGTH=296
          Length = 296

 Score =  294 bits (753), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 158/299 (52%), Positives = 201/299 (67%), Gaps = 18/299 (6%)

Query: 1   MTYYEDEGGGRRVEVVCQIEDNNINGDYVKLXXXXXXXXXXXXX--------------XX 46
           MT  EDE     +E++ ++ED++  G YVKL                             
Sbjct: 1   MTVTEDEK--PVLELLVRVEDDDEKGPYVKLSEVLEKGQESEQEKEEEKTDSSRFWFWVK 58

Query: 47  XXXXILFVGSLAVVVIKWVGPYFIDKEVIPIINWETETFSTPVLILLVFVSVALFXXXXX 106
                 F+ +LAVV   W+GP  +DKE+IP+I WE  TF+ PV  LLVF SVA+F     
Sbjct: 59  LSLLFAFLAALAVVGYIWIGPLIMDKELIPLIQWEIRTFTHPVCGLLVFASVAIFPTILL 118

Query: 107 XXXXXMWVAGMTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHKIEGWLEKYPKRASVIRS 166
                MW+AGMTFGYG+GFLLII+AAA+GVSLP+FIG  F HKI+GWLE+YP +A+V+R+
Sbjct: 119 PSTPSMWIAGMTFGYGYGFLLIISAAAVGVSLPYFIGQLFCHKIQGWLERYPDQAAVLRA 178

Query: 167 AGGGNWVHQFRAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGI 226
           AG GNW+HQF  VTLIRISPFPYI+YNYC+VAT VKYGPYI GSL+GMVPE+FVAIYTGI
Sbjct: 179 AGEGNWLHQFLLVTLIRISPFPYILYNYCSVATRVKYGPYITGSLLGMVPEVFVAIYTGI 238

Query: 227 LIRTLADASH-EKRSLSAPQIILNVLGFCXXXXXXXXXXXYAKRRLKELQSEDDESLLR 284
           L+RTLA+AS  E++ LS  Q+ILN+LGF            YAKR+L+ ++ E DE+LL+
Sbjct: 239 LVRTLAEASSAEEQGLSVTQVILNILGFLATVATTILITKYAKRQLETMKKE-DEALLQ 296


>AT4G12000.1 | Symbols:  | SNARE associated Golgi protein family |
           chr4:7193527-7194942 REVERSE LENGTH=306
          Length = 306

 Score =  273 bits (698), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 134/233 (57%), Positives = 171/233 (73%), Gaps = 1/233 (0%)

Query: 53  FVGSLAVVVIKWVGPYFIDKEVIPIINWETETFSTPVLILLVFVSVALFXXXXXXXXXXM 112
           F+ +L +   KW+ P  +DKE+IP+I WE ETF+ PV  +LVF SV+LF          M
Sbjct: 74  FLTALGLAGYKWLYPLIMDKELIPLIKWEMETFTHPVCGILVFASVSLFPVILIPTTPSM 133

Query: 113 WVAGMTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHKIEGWLEKYPKRASVIRSAGGGNW 172
           WVAG+TFGY +G LL + A AIGVSLP+FI   F +KI+GWLE+YP +A+++R+AGGG+W
Sbjct: 134 WVAGITFGYFYGLLLTLPAVAIGVSLPYFISYLFLNKIQGWLERYPDQAAMLRAAGGGSW 193

Query: 173 VHQFRAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRTLA 232
            HQFRAVTLIRISPFP+ +YNYCAVAT VK+GPY+ GSLVGM PEIFVAIYTGILIRTLA
Sbjct: 194 FHQFRAVTLIRISPFPFAVYNYCAVATRVKFGPYMAGSLVGMAPEIFVAIYTGILIRTLA 253

Query: 233 DAS-HEKRSLSAPQIILNVLGFCXXXXXXXXXXXYAKRRLKELQSEDDESLLR 284
           DAS  E++ LS  QI+LN+ GF            YAKR+L+ ++ E +  LL+
Sbjct: 254 DASTAEQKGLSILQIVLNIFGFVATVVTTVLITKYAKRQLEVMKKEKEALLLQ 306


>AT4G22850.2 | Symbols:  | SNARE associated Golgi protein family |
           chr4:11994194-11996048 FORWARD LENGTH=277
          Length = 277

 Score =  262 bits (670), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 141/258 (54%), Positives = 176/258 (68%), Gaps = 17/258 (6%)

Query: 1   MTYYEDEGGGRRVEVVCQIEDNNINGDYVKLXXXXXXXXXXXXX--------------XX 46
           MT  EDE     +E++ ++ED++  G YVKL                             
Sbjct: 1   MTVTEDEK--PVLELLVRVEDDDEKGPYVKLSEVLEKGQESEQEKEEEKTDSSRFWFWVK 58

Query: 47  XXXXILFVGSLAVVVIKWVGPYFIDKEVIPIINWETETFSTPVLILLVFVSVALFXXXXX 106
                 F+ +LAVV   W+GP  +DKE+IP+I WE  TF+ PV  LLVF SVA+F     
Sbjct: 59  LSLLFAFLAALAVVGYIWIGPLIMDKELIPLIQWEIRTFTHPVCGLLVFASVAIFPTILL 118

Query: 107 XXXXXMWVAGMTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHKIEGWLEKYPKRASVIRS 166
                MW+AGMTFGYG+GFLLII+AAA+GVSLP+FIG  F HKI+GWLE+YP +A+V+R+
Sbjct: 119 PSTPSMWIAGMTFGYGYGFLLIISAAAVGVSLPYFIGQLFCHKIQGWLERYPDQAAVLRA 178

Query: 167 AGGGNWVHQFRAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGI 226
           AG GNW+HQF  VTLIRISPFPYI+YNYC+VAT VKYGPYI GSL+GMVPE+FVAIYTGI
Sbjct: 179 AGEGNWLHQFLLVTLIRISPFPYILYNYCSVATRVKYGPYITGSLLGMVPEVFVAIYTGI 238

Query: 227 LIRTLADASH-EKRSLSA 243
           L+RTLA+AS  E++ LS 
Sbjct: 239 LVRTLAEASSAEEQGLST 256


>AT2G02370.2 | Symbols:  | SNARE associated Golgi protein family |
           chr2:621841-623084 FORWARD LENGTH=320
          Length = 320

 Score =  204 bits (520), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 97/232 (41%), Positives = 143/232 (61%), Gaps = 4/232 (1%)

Query: 57  LAVVVIKWVGPYFIDKEVIPIINWETETFSTPVLILLVFVSVALFXXXXXXXXXXMWVAG 116
           L +V  KW  P+   K +IPI+ WE   F  P+L +++ VS+ALF          MW+AG
Sbjct: 68  LTLVFGKWGVPFVFQKVLIPILQWEATAFGRPMLAIVLVVSLALFPVFLIPSGPSMWLAG 127

Query: 117 MTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHKIEGWLEKYPKRASVIRSAGGGNWVHQF 176
           M FGYG GF++I+    IG+ LP+ IG  F  ++  WL+++P++A+V+R A  G+W HQF
Sbjct: 128 MIFGYGLGFVIIMVGTTIGMVLPYLIGLMFRDRLHQWLKRWPRQAAVLRLAAEGSWFHQF 187

Query: 177 RAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRTLADASH 236
           R V + R+SPFPY I+NY  V T++++ PY  GS+ GM+PE F+ IY+G LIRT AD  +
Sbjct: 188 RVVAIFRVSPFPYTIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYIYSGRLIRTFADVQY 247

Query: 237 EKRSLSAPQIILNVLGFCXXXXXXXXXXXYAKRRLKELQ----SEDDESLLR 284
             + L+  +I+ NV+              YAKR L+ELQ    +ED+E  +R
Sbjct: 248 GHQRLTTVEIVYNVISLVIAVVTTVAFTVYAKRALRELQNAEANEDEEVQVR 299


>AT2G02370.1 | Symbols:  | SNARE associated Golgi protein family |
           chr2:621841-623084 FORWARD LENGTH=320
          Length = 320

 Score =  204 bits (520), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 97/232 (41%), Positives = 143/232 (61%), Gaps = 4/232 (1%)

Query: 57  LAVVVIKWVGPYFIDKEVIPIINWETETFSTPVLILLVFVSVALFXXXXXXXXXXMWVAG 116
           L +V  KW  P+   K +IPI+ WE   F  P+L +++ VS+ALF          MW+AG
Sbjct: 68  LTLVFGKWGVPFVFQKVLIPILQWEATAFGRPMLAIVLVVSLALFPVFLIPSGPSMWLAG 127

Query: 117 MTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHKIEGWLEKYPKRASVIRSAGGGNWVHQF 176
           M FGYG GF++I+    IG+ LP+ IG  F  ++  WL+++P++A+V+R A  G+W HQF
Sbjct: 128 MIFGYGLGFVIIMVGTTIGMVLPYLIGLMFRDRLHQWLKRWPRQAAVLRLAAEGSWFHQF 187

Query: 177 RAVTLIRISPFPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRTLADASH 236
           R V + R+SPFPY I+NY  V T++++ PY  GS+ GM+PE F+ IY+G LIRT AD  +
Sbjct: 188 RVVAIFRVSPFPYTIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYIYSGRLIRTFADVQY 247

Query: 237 EKRSLSAPQIILNVLGFCXXXXXXXXXXXYAKRRLKELQ----SEDDESLLR 284
             + L+  +I+ NV+              YAKR L+ELQ    +ED+E  +R
Sbjct: 248 GHQRLTTVEIVYNVISLVIAVVTTVAFTVYAKRALRELQNAEANEDEEVQVR 299


>AT1G03260.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:795678-798102 REVERSE LENGTH=274
          Length = 274

 Score = 60.8 bits (146), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 12/172 (6%)

Query: 116 GMTFGYGFGFLLIITAAAIGVSLPFFIGSTFHHK-IEGWLEKYPKRASV---IRSAGGGN 171
           G  FG   GF+     A +G +  F +G T     +   ++ YPK  +V   I+ +G   
Sbjct: 77  GYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAIQKSG--- 133

Query: 172 WVHQFRAVTLIRISP-FPYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRT 230
               F+ V L+R+ P  P+ + NY    T V+ G Y++ + +GM+P  F  +Y G  ++ 
Sbjct: 134 ----FKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTLKD 189

Query: 231 LADASHEKRSLSAPQIILNVLGFCXXXXXXXXXXXYAKRRLKELQSEDDESL 282
           L+D +H    +S  + ++ ++G              AK  L +  +E+   L
Sbjct: 190 LSDITHGWHEVSVFRWVIMMVGVALAVILIICITRVAKSSLDKALAENGTEL 241


>AT1G22850.1 | Symbols:  | SNARE associated Golgi protein family |
           chr1:8080671-8082816 REVERSE LENGTH=344
          Length = 344

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 63/119 (52%), Gaps = 6/119 (5%)

Query: 115 AGMTFGYGFGFLLIITAAAIGVSLPFFIGSTF-HHKIEGWLEKYPKRASVIRSAGGGNWV 173
           AG+ FG   G +++  +  +  S+ F I   F   +I   +E   K  ++ ++ G     
Sbjct: 177 AGLLFGPLIGTIIVSISGTMAASVAFLIARYFARERILKLVEDNKKFLAIDKAIG----E 232

Query: 174 HQFRAVTLIRISPF-PYIIYNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIRTL 231
           + FR VTL+R+SP  P+ + NY    T+VK+ PY++GS +GM+P  +  +  G   R +
Sbjct: 233 NGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGSWLGMLPGSWAYVSAGAFGRAI 291